BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011659
(480 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/454 (82%), Positives = 414/454 (91%)
Query: 27 TNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG 86
TNGV+SRK FEY+AISCRAH ASLE+FGGVGDG TSNTKAF+AAIDHLS+F +G
Sbjct: 27 TNGVDSRKRPKLACFEYAAISCRAHEASLEDFGGVGDGQTSNTKAFQAAIDHLSQFSYDG 86
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
GSQL+VPPGKWLTGSFNLTSHFTLFL KDAVLLASQDE EWPVIEPLPSYGRGRDTEGGR
Sbjct: 87 GSQLYVPPGKWLTGSFNLTSHFTLFLDKDAVLLASQDESEWPVIEPLPSYGRGRDTEGGR 146
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
YSSLIFGTNLTDVVITG NGTIDGQG+LWW+KF GE+ YTRPYLIEIMYS NIQISNLT
Sbjct: 147 YSSLIFGTNLTDVVITGANGTIDGQGDLWWKKFHNGEINYTRPYLIEIMYSNNIQISNLT 206
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
L+NSPSWN+HP YSS+V+VQGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAV
Sbjct: 207 LMNSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326
KSGWD+YGI++GMPTKQL+IRRLTCISP SA IALGSEMSGGIQDVRAEDIT I++ESGV
Sbjct: 267 KSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEMSGGIQDVRAEDITCINTESGV 326
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
RIKT+VGRGG+VKD+YVR+MTM TMKW FW+TG+YGSHPDNNYDP+A+PVI+NINYRD+V
Sbjct: 327 RIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIV 386
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLP 446
AENVTMAARLEGIAGDPFTGICISNVTI L KPKKLQWNCTDI GISSGVTPKPC LLP
Sbjct: 387 AENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQWNCTDIAGISSGVTPKPCSLLP 446
Query: 447 DHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
+ E + +CNFP++ LP+EN+ V+MCS YL
Sbjct: 447 EQEKEKIADCNFPEDSLPIENIEVKMCSSSRKYL 480
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/449 (83%), Positives = 415/449 (92%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
VESR+A D+FEY A+SCRA+SASLEEFGGVGDGTT NTKAF+AAIDHLS++ S GGSQ
Sbjct: 20 VESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQ 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
L+VPPGKWLTGSFNLTSHFTLFLHKDAV+LASQDE +WPVI+PLPSYGRGRDT+GGR+SS
Sbjct: 80 LYVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSS 139
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFGTNLTDV+ITGDNGTIDGQG+LWW+KFR GELKYTRPYLIEIMYS N+QISNLTL+N
Sbjct: 140 LIFGTNLTDVIITGDNGTIDGQGDLWWQKFRKGELKYTRPYLIEIMYSDNVQISNLTLVN 199
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SPSWNVHP+YSS+++VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG
Sbjct: 200 SPSWNVHPIYSSNLVVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 259
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGIAYGMPTKQL+IRRLTCISPFSAVIALGSEMSGGIQDVRAEDI AI+SESGVRIK
Sbjct: 260 WDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIK 319
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TAVGRGG+VKD++VRRMTMKTMKWAFW+TG+YGSH D+NYDP+ALPVIQNINYRDMVAEN
Sbjct: 320 TAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAEN 379
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
VTMAARLEGI+GDPFTGICISNVTI+L K KK+ W CTDI GISS VTP PC LLPD
Sbjct: 380 VTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQG 439
Query: 450 PAQTTECNFPDNRLPVENMGVQMCSYKAN 478
+ C FP+ LP+E++ VQ C+Y+ N
Sbjct: 440 EEKIGACTFPEESLPIEDIKVQTCTYRRN 468
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/471 (79%), Positives = 426/471 (90%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDG 64
++A+R++VI + L+G+++ T GVESRK+ D+FEY+A+SCRAHSAS+ +FGGVGDG
Sbjct: 5 RSARRSKVIDVRGLLGVLVLFYTVGVESRKSVKWDYFEYAALSCRAHSASVSDFGGVGDG 64
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
TT+NTKAF+AAIDHLS+F SEGGS L+VPPG+WLTGSFNLTS+FTL+L KDAVLLASQDE
Sbjct: 65 TTANTKAFQAAIDHLSQFSSEGGSILYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDE 124
Query: 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGEL 184
E+P+IEPLPSYGRGRD +G RYSSLIFG NLTDV+ITG NGTIDGQGELWW KFRAGEL
Sbjct: 125 SEYPLIEPLPSYGRGRDADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGEL 184
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
YTRPYLIEIM+S NIQISNLTLINSPSWNVHPVY S+V+VQG+TILAPV SPNTDGINP
Sbjct: 185 NYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINP 244
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
DSCTNTRIEDCYIVSGDDCVAVKSGWD+YGI++GMPTKQL+IRRLTCISP SAVIALGSE
Sbjct: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAVIALGSE 304
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGI+DVRAEDITAIDSESGVRIKTAVGRGG+VKD+YVR MT+KTMKW FW+TG+YGSH
Sbjct: 305 MSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSH 364
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PDNNYDP+A+PVIQNINYRD+VAENVTMAA+LEGIAGDPFTGICISNVTI L KKLQ
Sbjct: 365 PDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQNSKKLQ 424
Query: 425 WNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
WNCTD+ GI+S V PKPC LLPD P + CNFP++ LPVENM VQ CS+
Sbjct: 425 WNCTDVAGITSEVNPKPCALLPDQGPGKIGGCNFPEDSLPVENMEVQTCSF 475
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/454 (81%), Positives = 408/454 (89%)
Query: 27 TNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG 86
TNG ESRK D+FEYSAI+CRAHSASL +FGGVGDGTTSNTKAF+AAIDHLS+F S+G
Sbjct: 27 TNGAESRKHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDG 86
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
GSQLFVPPG+WLTGSFNLTSHFTL+LHKDAVLLASQDE EWPVI+PLPSYGRGRDT+GGR
Sbjct: 87 GSQLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGR 146
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
Y SLIFGTNLTDVVITG+NGTIDGQG LWW KF GELKYTRPYLIEIM+S N+QIS+LT
Sbjct: 147 YISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLT 206
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
L+NSPSWNVHPVYSS+VI+QG+TI APVTSPNTDGINPDSCTNTRIEDCYIVSGDDC+AV
Sbjct: 207 LVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAV 266
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326
KSGWD+YGIAYGMPTKQL+IRRLTCISPFSA IALGSEMSGGI+DVRAEDI AID+ESGV
Sbjct: 267 KSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGV 326
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
RIKTAVGRGG+VKD+YVR M MKTMKWAFW+TG+YGSH DNNYDP+ALP IQ INYRDMV
Sbjct: 327 RIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMV 386
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLP 446
AENVTMA RLEGI+GDPFTGICISNVTI L K KK W CTDI GI+SGV P+PC+LLP
Sbjct: 387 AENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLP 446
Query: 447 DHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
D P + CNFP + LP++ + VQ CSY YL
Sbjct: 447 DQGPEKIVACNFPTDSLPIDTVEVQTCSYWGKYL 480
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/449 (81%), Positives = 414/449 (92%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
VESR+A D+FEY A+SCRA+SASLEEFGGVGDGTT NTKAF+AAI++LS++ + GGSQ
Sbjct: 45 VESRRAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIENLSQYAASGGSQ 104
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
L+VPPGKWLTGSFNLTSHFTLFLHKDAV+LASQDE +WPVI+PLPSYGRGRDT+GGR+SS
Sbjct: 105 LYVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSS 164
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFGTNLTDV+ITGDNGTIDGQG+LWW+KF GELKYTRPYL+EIMYS N+QISNLTL+N
Sbjct: 165 LIFGTNLTDVIITGDNGTIDGQGDLWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVN 224
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SPSWNVHP+YSS+V+VQGITILAPVTSPNTDGINPDSCT+TRIEDCYIVSGDDCVAVKSG
Sbjct: 225 SPSWNVHPIYSSNVVVQGITILAPVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSG 284
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGIAYGMPTKQL+IRRLTCISPFSA IALGSEMSGGIQD+RAEDI AI++ESGVRIK
Sbjct: 285 WDEYGIAYGMPTKQLVIRRLTCISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIK 344
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TAVGRGG+VKD++VRRMTMKTMKWAFW+TG+YGSH D+NYDP+ALPVIQNINYRDMVAEN
Sbjct: 345 TAVGRGGYVKDIFVRRMTMKTMKWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAEN 404
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
VTMAARLEGI+GDPFTGICISNVTI+L K KK+ W CTDI GISS VTP PC+LLPD
Sbjct: 405 VTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQG 464
Query: 450 PAQTTECNFPDNRLPVENMGVQMCSYKAN 478
+ C FP+ LP+E++ VQ C+Y+ N
Sbjct: 465 EEKIGACTFPEESLPIEDIKVQTCTYRRN 493
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/454 (80%), Positives = 412/454 (90%)
Query: 21 IIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLS 80
+++ L T GVESRK+ D FEY+A+SCRAHSAS+ +FGGVGDGTT NT+AF+AAIDHLS
Sbjct: 12 VLVLLCTIGVESRKSSKWDCFEYAAVSCRAHSASVSDFGGVGDGTTVNTEAFQAAIDHLS 71
Query: 81 RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGR 140
+F SEGGS L+VPPG+WLTGSFNLTS+FTL+L KDAVLLASQDE E+P+IEPLPSYGRGR
Sbjct: 72 QFSSEGGSLLYVPPGRWLTGSFNLTSYFTLYLDKDAVLLASQDESEYPLIEPLPSYGRGR 131
Query: 141 DTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNI 200
D +G RYSSLIFG NLTDV+ITG NGTIDGQGELWW KFRAGEL +TRPYLIEIM+S NI
Sbjct: 132 DADGARYSSLIFGNNLTDVIITGANGTIDGQGELWWTKFRAGELNHTRPYLIEIMFSTNI 191
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
QISNLTLINSPSWNVHPVY S+V+VQG+TILAPV SPNTDGINPDSCTNT+I+DCYIVSG
Sbjct: 192 QISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPDSCTNTKIQDCYIVSG 251
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DDCVAVKSGWD+YGIA+GMPTKQ++IRRLTCISP SAVIALGSEMSGGI+DVRAEDITAI
Sbjct: 252 DDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEMSGGIEDVRAEDITAI 311
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNI 380
DSESGVRIKTAVGRGG+VKD+YVR MT+KTMKW FW+TG+YGSHPDNNYDP+A+PVIQNI
Sbjct: 312 DSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHPDNNYDPNAIPVIQNI 371
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK 440
NYRD+VAENVTMAARLEGIAGDPFTGICISNVTI L KKLQWNC+D+ GI+S VTPK
Sbjct: 372 NYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQWNCSDVAGITSEVTPK 431
Query: 441 PCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
PC+LL D P + CN+P++ LP+ENM VQ CS
Sbjct: 432 PCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCS 465
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/465 (75%), Positives = 415/465 (89%), Gaps = 1/465 (0%)
Query: 15 IILLVGIIISL-NTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
++LLV +++ L + + VES + + FEY A++CRA+SAS+ +FGGVGDGTT NT+AF+
Sbjct: 4 LLLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAFR 63
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL 133
AI+HLS++ S GGSQL+VPPG+WLTGS NLTSHFTLF+HKDAV+L SQDE EWPVI+PL
Sbjct: 64 KAIEHLSQYSSNGGSQLYVPPGRWLTGSLNLTSHFTLFIHKDAVILGSQDENEWPVIDPL 123
Query: 134 PSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
PSYGRGRDT+GGR+SSLIFGT+LTDV+ITGDNGT+DGQG+LWW+KF +L+YTRPYLIE
Sbjct: 124 PSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIE 183
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
IMYS N+QISNLTL+NSPSWN+HPVY S+VIVQGITILAPVTSPNTDGINPDSCTNTRIE
Sbjct: 184 IMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIE 243
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYIVSGDDCVAVKSGWD+YGI+YGMPTK L+IRRLTCISP SAVIALGSEMSGGI+DVR
Sbjct: 244 DCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVR 303
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
AEDI AI+SESGVRIKTAVGRGG+V+D+YVRRMTMKTMKW FW+TG YGSH DNNYDP+A
Sbjct: 304 AEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNA 363
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
+PVI+NINYRDMVAENVTMAARLEGI+G PFTGICISNVTIEL K KK+ W CTD++GI
Sbjct: 364 IPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGI 423
Query: 434 SSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKAN 478
SSGVTP+PCELLP + C+FP++ L +E++ VQ C+Y+ N
Sbjct: 424 SSGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCTYRRN 468
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/456 (76%), Positives = 404/456 (88%)
Query: 25 LNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQS 84
++ G ESRKAR D FEYSAI+CRAHSASL +FGGVGDGTTSNTKAFK AIDHLS+F S
Sbjct: 15 ISFRGAESRKARILDSFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFKDAIDHLSQFSS 74
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG 144
+GGSQLFVP GKWLTGSF+LTSHFTL+LHKDAVLLASQD +EWPV++PLPSYGRGRD
Sbjct: 75 DGGSQLFVPAGKWLTGSFSLTSHFTLYLHKDAVLLASQDMQEWPVMKPLPSYGRGRDAAA 134
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISN 204
GRYSSLIFGTNLTDV+ITG+NGTIDGQG WW+ F G+LKYTRPYLIEIM+S IQISN
Sbjct: 135 GRYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQNFHKGKLKYTRPYLIEIMFSDTIQISN 194
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
LTL+NSPSWNVHPVYS ++VQGITI+AP++SPNTDGINPDSCTNT+IEDCYIVSGDDCV
Sbjct: 195 LTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCV 254
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
AVKSGWD+YGIA+GMPTKQL+IRRLTCISP+SA IALGSEMSGGI+DVRAEDITAI +ES
Sbjct: 255 AVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIEDVRAEDITAIHTES 314
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRD 384
GVRIKTAVGRGG+VKD+YV+RMTM TMKW FW+TG+YGSH D NYDP+ALP+IQ INYRD
Sbjct: 315 GVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGSHADKNYDPNALPLIQGINYRD 374
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCEL 444
MVA+NVTMAARLEGIAGDPF ICISNVTI L K KK+ W CT+I G++SGV+P+PC+L
Sbjct: 375 MVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKVPWTCTEIEGMTSGVSPRPCDL 434
Query: 445 LPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
LPD P + T C+FP +P++ + +MCS+ +Y+
Sbjct: 435 LPDQGPEKITSCDFPPENIPIDLVQFKMCSFGMSYM 470
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/465 (75%), Positives = 415/465 (89%), Gaps = 1/465 (0%)
Query: 15 IILLVGIIISL-NTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
++LLV +++ L + + VES + + FEY A++CRA+SAS+ +FGGVGDGTT NT+AF+
Sbjct: 4 LLLLVFMMVVLPSLHVVESVRTPVLENFEYCAVNCRAYSASVTDFGGVGDGTTLNTQAFR 63
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL 133
AI+HLS++ S GGSQL+VPPG+WLTGSFNLTSHFTLF+HKDAV+L SQDE EWPVI+PL
Sbjct: 64 KAIEHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFIHKDAVILGSQDENEWPVIDPL 123
Query: 134 PSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
PSYGRGRDT+GGR+SSLIFGT+LTDV+ITGDNGT+DGQG+LWW+KF +L+YTRPYLIE
Sbjct: 124 PSYGRGRDTQGGRFSSLIFGTHLTDVIITGDNGTLDGQGDLWWKKFHNKQLQYTRPYLIE 183
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
IMYS N+QISNLTL+NSPSWN+HPVY S+VIVQGITILAPVTSPNTDGINPDSCTNTRIE
Sbjct: 184 IMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVTSPNTDGINPDSCTNTRIE 243
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYIVSGDDCVAVKSGWD+YGI+YGMPTK L+IRRLTCISP SAVIALGSEMSGGI+DVR
Sbjct: 244 DCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPTSAVIALGSEMSGGIEDVR 303
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
AEDI AI+SESGVRIKTAVGRGG+V+D+YVRRMTMKTMKW FW+TG YGSH DNNYDP+A
Sbjct: 304 AEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVFWMTGDYGSHADNNYDPNA 363
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
+PVI+NINYRDMVAENVTMAARL GI+G PFTGICISNVTIEL K KK+ W CTD++GI
Sbjct: 364 IPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIELAKKAKKVPWTCTDVSGI 423
Query: 434 SSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKAN 478
SSGVTP+PCELLP + C+FP++ L +E++ VQ C+Y+ N
Sbjct: 424 SSGVTPEPCELLPGQAEEKFGACSFPEDNLAIEDVKVQTCTYRRN 468
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/449 (77%), Positives = 393/449 (87%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E RK R + EYSAISCRAHSASL +FGGVGDG T NTKAF+ A+ LS++ SEGG+QL
Sbjct: 29 ECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQL 88
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
+VP GKWLTGSF+LTSHFTLFLH+DAVLLASQD +WPVI+PLPSYGRGRD GRY+SL
Sbjct: 89 YVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSL 148
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
IFGTNLTDV+ITGDNGTIDGQG LWW++F G+LKYTRPYLIE+MYS +IQISNLTL+NS
Sbjct: 149 IFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNS 208
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSWNVHPVYS ++++QGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW
Sbjct: 209 PSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 268
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
D+YGIAYGMPTKQL+IRRLTCISP+SAVIALGSEMSGGIQDVRAEDI AI+SESG+RIKT
Sbjct: 269 DEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKT 328
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV 390
+GRGG+VKD+YVR MTMKTMKWAFW+TG+YGSH DN+YDP A PVIQ INYRDMVAENV
Sbjct: 329 GIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENV 388
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEP 450
+MAARLEGI DPFTGICISNVTI L K KK+ W CTD+ GISSGVTP PC LPD P
Sbjct: 389 SMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGP 448
Query: 451 AQTTECNFPDNRLPVENMGVQMCSYKANY 479
+T+ CNFP LP++ + +Q CSY NY
Sbjct: 449 EKTSLCNFPAESLPIDTVELQKCSYGINY 477
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/449 (77%), Positives = 393/449 (87%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E RK R + EYSAISCRAHSASL +FGGVGDG T NTKAF+ A+ LS++ SEGG+QL
Sbjct: 41 ECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQL 100
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
+VP GKWLTGSF+LTSHFTLFLH+DAVLLASQD +WPVI+PLPSYGRGRD GRY+SL
Sbjct: 101 YVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSL 160
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
IFGTNLTDV+ITGDNGTIDGQG LWW++F G+LKYTRPYLIE+MYS +IQISNLTL+NS
Sbjct: 161 IFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNS 220
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSWNVHPVYS ++++QGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW
Sbjct: 221 PSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 280
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
D+YGIAYGMPTKQL+IRRLTCISP+SAVIALGSEMSGGIQDVRAEDI AI+SESG+RIKT
Sbjct: 281 DEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKT 340
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV 390
+GRGG+VKD+YVR MTMKTMKWAFW+TG+YGSH DN+YDP A PVIQ INYRDMVAENV
Sbjct: 341 GIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENV 400
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEP 450
+MAARLEGI DPFTGICISNVTI L K KK+ W CTD+ GISSGVTP PC LPD P
Sbjct: 401 SMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGP 460
Query: 451 AQTTECNFPDNRLPVENMGVQMCSYKANY 479
+T+ CNFP LP++ + +Q CSY NY
Sbjct: 461 EKTSLCNFPAESLPIDTVELQKCSYGINY 489
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/477 (71%), Positives = 409/477 (85%), Gaps = 9/477 (1%)
Query: 4 LKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD 63
L ++ + +V +I + I+ L+ G ESRKAR D FEY+AISCRAHSAS+ +FGGVGD
Sbjct: 5 LISSIKPRVTNVISVFVILALLSARGAESRKARVLDSFEYNAISCRAHSASITDFGGVGD 64
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF+ AI HLS++ ++GGSQLFVP GKWLTGSF+LTSHFTLFLHKDAVLL SQD
Sbjct: 65 GITSNTKAFQDAIAHLSQYATDGGSQLFVPAGKWLTGSFSLTSHFTLFLHKDAVLLGSQD 124
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
KEWP+++PLPSYGRGRD GRYSSLIFGTNLTD+++TG+NGTIDGQG WW++F+ G+
Sbjct: 125 LKEWPLLKPLPSYGRGRDAAAGRYSSLIFGTNLTDIIVTGNNGTIDGQGAFWWQQFKKGK 184
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIEIMYS NIQISNLTL+NSPSWNVHPVYSS++++QGITI+APVTSPNTDGIN
Sbjct: 185 LKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPNTDGIN 244
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
P DCYI+SGDDCVAVKSGWD+YGIA+GMPTKQL+IRRLTCISP+SA IALGS
Sbjct: 245 P---------DCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGS 295
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+RMTM TMKWAFW+TG+YGS
Sbjct: 296 EMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNYGS 355
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D NYDP+ALPVI+ INYRDMVA+NV+MAARLEGI+GDPF ICISNVTI + K KK+
Sbjct: 356 HADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAKKI 415
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
W CTDI GI++GV+P+PC+LLPD P + T C+FP +P++++ Q C+Y +Y+
Sbjct: 416 PWTCTDIEGITTGVSPRPCDLLPDQGPEKLTACDFPPENIPIDSVQFQKCTYSMHYM 472
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/433 (77%), Positives = 388/433 (89%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
FEYSAISCRA+SASL+EFG VGDG TSNTKAF+ A+ LSRF+ GGS LFVP G+WLTG
Sbjct: 55 FEYSAISCRAYSASLDEFGAVGDGVTSNTKAFRDAVSQLSRFEDYGGSLLFVPAGRWLTG 114
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
+FNLTSHFTLFLH+DAV+LASQ+E ++ VIEPLPSYGRGRDT+GGR+ SL+FG+NLTDVV
Sbjct: 115 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 174
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQGE WW KF+ GELKYTRPYLIEIM+S IQISNLT +NSPSW++HPVYS
Sbjct: 175 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
++ +QG+TILAPVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWDQYGIAYGMP
Sbjct: 235 RNIFIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMP 294
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL+IRRLTCISP SAVIALGSEMSGGI+DVRAEDI AIDSESG+RIKTA+GRGG+VKD
Sbjct: 295 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKD 354
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
VYVR MTMKTMK+ FW+TGSYGSHPD +YDP ALPVIQNINY+DMVAENVTM A+L GI+
Sbjct: 355 VYVRGMTMKTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 414
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
GD FTGICISNVTI L+ KPKK+ WNCTD++G +SGVTP PC+LLP+ +P CNFPD
Sbjct: 415 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQPGTVVPCNFPD 474
Query: 461 NRLPVENMGVQMC 473
+ +P++ + +Q C
Sbjct: 475 DPIPIDEVKLQRC 487
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/473 (71%), Positives = 403/473 (85%), Gaps = 1/473 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARNSDW-FEYSAISCRAHSASLEEFGGVGD 63
K+ R QVI ++ + ++ L++ ESRKA+ + FEY AI+CRAHSASL +FGGVGD
Sbjct: 6 KSHVRVQVIRLVCALLLVTLLSSEVAESRKAKTARTSFEYKAINCRAHSASLIDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF++AI HLS++ S+GG+QL+VP GKWLTGSF+L SHFTL+L+KDA LLASQD
Sbjct: 66 GNTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAFLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
+EWPVIEPLPSYGRGRD GRY+SLIFGTNLTDV++TGDNGTIDGQG WW+KF+ +
Sbjct: 126 IREWPVIEPLPSYGRGRDAAAGRYTSLIFGTNLTDVIVTGDNGTIDGQGAFWWQKFQKKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S IQISNLTL+NSPSWNVHPVYSS++I++G+TI+APV SPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTNTRIEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISP SA IALGS
Sbjct: 246 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAAIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+RMTM TMKW FW+TG+YGS
Sbjct: 306 EMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D++YDP+ALP I INYRD+VA+NVT+AARLEGI+ DPFTGICI+NVTI + K KK
Sbjct: 366 HADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAAKAKKQ 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYK 476
W CTDI GI+SGVTPKPC LPD P + C+FP LP++ + +Q C YK
Sbjct: 426 PWACTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQENLPIDMLELQKCVYK 478
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/439 (75%), Positives = 386/439 (87%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
EY AISCRAH+AS+ EFGGVGDG TSNTKAF+AA++ LS++ +GG+QL+VP GKWLTG
Sbjct: 54 IEYGAISCRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTG 113
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
SFNLTSHFTLFLH+DAVLLASQD EWPV+EPLPSYG GRDT GGRY SLIFGTNLTDVV
Sbjct: 114 SFNLTSHFTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVV 173
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQG+ WW+ F G+LKYTRPYLIE+MYS +IQIS+LTL+NSP+WNVHPVYS
Sbjct: 174 ITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYS 233
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++++QGITI+APV SPNTDGINPDSCTN RIEDCYIVSGDDCVAVKSGWD+YGI++G+P
Sbjct: 234 SNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLP 293
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL++RRLTCISP SAVIALGSEMSGGI+DVRAEDI AIDSESGVRIKT +GRGG+VKD
Sbjct: 294 TKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKD 353
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
+YVRRMTM TMKWAFW+TG YGSH D NYDPHALPVIQ INY+DMV EN TMAARLEGI+
Sbjct: 354 IYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGIS 413
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
GD FT ICISNVTI L K KK W CTDI GI+S VTP PC+LLPD + T C FP+
Sbjct: 414 GDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPE 473
Query: 461 NRLPVENMGVQMCSYKANY 479
+ LP++++ ++ CSY+ ++
Sbjct: 474 DNLPIDSVQLKKCSYQFSH 492
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/439 (75%), Positives = 386/439 (87%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
EY AISCRAH+AS+ EFGGVGDG TSNTKAF+AA++ LS++ +GG+QL+VP GKWLTG
Sbjct: 54 IEYGAISCRAHTASITEFGGVGDGVTSNTKAFQAAVEQLSQYTDDGGAQLYVPAGKWLTG 113
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
SFNLTSHFTLFLH+DAVLLASQD EWPV+EPLPSYG GRDT GGRY SLIFGTNLTDVV
Sbjct: 114 SFNLTSHFTLFLHQDAVLLASQDPNEWPVVEPLPSYGHGRDTSGGRYISLIFGTNLTDVV 173
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQG+ WW+ F G+LKYTRPYLIE+MYS +IQIS+LTL+NSP+WNVHPVYS
Sbjct: 174 ITGNNGTIDGQGDRWWQLFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYS 233
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++++QGITI+APV SPNTDGINPDSCTN RIEDCYIVSGDDCVAVKSGWD+YGI++G+P
Sbjct: 234 SNILIQGITIIAPVRSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLP 293
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL++RRLTCISP SAVIALGSEMSGGI+DVRAEDI AIDSESGVRIKT +GRGG+VKD
Sbjct: 294 TKQLVVRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKD 353
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
+YVRRMTM TMKWAFW+TG YGSH D NYDPHALPVIQ INY+DMV EN TMAARLEGI+
Sbjct: 354 IYVRRMTMHTMKWAFWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGIS 413
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
GD FT ICISNVTI L K KK W CTDI GI+S VTP PC+LLPD + T C FP+
Sbjct: 414 GDTFTDICISNVTIGLAPKAKKQPWTCTDIEGITSQVTPPPCDLLPDQGEEKITTCKFPE 473
Query: 461 NRLPVENMGVQMCSYKANY 479
+ LP++++ ++ CSY+ ++
Sbjct: 474 DNLPIDSVQLKKCSYQFSH 492
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/482 (70%), Positives = 406/482 (84%), Gaps = 2/482 (0%)
Query: 1 MGSL-KTAKRTQVICIILLVGIIISLNTNGVESRKARN-SDWFEYSAISCRAHSASLEEF 58
MG L KT R VI + ++ L++ VESRKA+ + EY+AI+CRAHSA+L +F
Sbjct: 1 MGLLWKTHTRIHVIRTFFAILLVALLSSERVESRKAKVVTTSLEYNAINCRAHSAALTDF 60
Query: 59 GGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVL 118
GGVGDG TSNTKAF++AI HLS++ SEGGSQL+VP GKWLTGSF+LTSHFTL+L KDAVL
Sbjct: 61 GGVGDGKTSNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVL 120
Query: 119 LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRK 178
LASQD EWPV+EPLPSYGRGRD GR++SLIFGTNLTDV++TG+NGTIDGQGE WW++
Sbjct: 121 LASQDITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQ 180
Query: 179 FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
F +LKYTRPYLIE+M+S NIQISNLTL+NSPSWNVHPVYSS++IVQGITI APVTSPN
Sbjct: 181 FHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPN 240
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TDGINPDSCTN RIEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISP+SA
Sbjct: 241 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSAT 300
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
IALGSEMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+RMT+ TMKWAF +T
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMT 360
Query: 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
G Y SH D +YDP+ALP I+NINYRD+VAENVT+AAR +GI+ DPFTGICI+NVT+ +
Sbjct: 361 GDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAA 420
Query: 419 KPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKAN 478
K KK W CTDI G++SGVTP PC LLPD P + T C+FP + LP++ + ++ C+
Sbjct: 421 KAKKQPWTCTDIEGMTSGVTPPPCGLLPDQGPEKITACDFPADNLPIDIVELKKCTTTMT 480
Query: 479 YL 480
Y+
Sbjct: 481 YV 482
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/433 (76%), Positives = 387/433 (89%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
FEYSAISCRA+SASL+EFG VGDG TSNT AF+ A+ LSRF GGS LFVP G+WLTG
Sbjct: 56 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 115
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
+FNLTSHFTLFLH+DAV+LASQ+E ++ VIEPLPSYGRGRDT+GGR+ SL+FG+NLTDVV
Sbjct: 116 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 175
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQGE WW KF+ GELKYTRPYLIEIM+S IQISNLT +NSPSW++HPVYS
Sbjct: 176 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 235
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++ +QG+TILAPVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWDQYGI YGMP
Sbjct: 236 SNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 295
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL+IRRLTCISP SAVIALGSEMSGGI+DVRAEDI AI+SESG+RIKTA+GRGG+VKD
Sbjct: 296 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 355
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
VYVR MTM TMK+ FW+TGSYGSHPD++YDP ALPVIQNINY+DMVAENVTM A+L GI+
Sbjct: 356 VYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 415
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
GD FTGICISNVTI L+ KPKK+ WNCTD++G +SGVTP+PC+LLP+ +P CNFP+
Sbjct: 416 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
Query: 461 NRLPVENMGVQMC 473
+ +P++ + +Q C
Sbjct: 476 DPIPIDEVKLQRC 488
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/477 (71%), Positives = 404/477 (84%), Gaps = 1/477 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARN-SDWFEYSAISCRAHSASLEEFGGVGD 63
KT R VI + ++ L++ GVESRKA+ + EY+AI+CRAHSASL +FGGVGD
Sbjct: 6 KTLMRIHVIRTFFALLLVALLSSEGVESRKAKVVTTSLEYNAINCRAHSASLTDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G SNTKAF++AI HLS++ SEGGSQL+VP GKWLTGSF+LTSHFTL+L KDAVLLASQD
Sbjct: 66 GKASNTKAFQSAISHLSQYASEGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWPV+EPLPSYGRGRD GR++SLIFGTNLTDV++TG+NGTIDGQGE WW++F +
Sbjct: 126 ITEWPVLEPLPSYGRGRDAPAGRFTSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHRKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S NIQISNLTL+NSPSWNVHPVYSS++IVQGITI APVTSPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVTSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTN RIEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISP+SA IALGS
Sbjct: 246 PDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPYSATIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+RMT+ TMKWAF +TG Y S
Sbjct: 306 EMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAFKMTGDYNS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D++YDP+ALP I+NINYRD+VAENVT+AAR +GI+ DPFTGICI+NVT+ + K KK
Sbjct: 366 HADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLRMAAKAKKQ 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
W CTDI G++SGVTP PC LLPD P + T C+FP + LP++ + ++ C+ ++
Sbjct: 426 PWTCTDIEGMTSGVTPPPCGLLPDQGPEKITACDFPADSLPIDMLELKKCTTTMTFV 482
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/433 (76%), Positives = 384/433 (88%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
FEYSAISCRA+SASL+EFG VGDG TSNT AF+ A+ LSRF GGS LFVP G+WLTG
Sbjct: 55 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 114
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
SFNLTSHFTLFLH+DAV+LASQ+E ++ VIEPLPSYGRGRDT+GGR+ SL+FG+NLTDVV
Sbjct: 115 SFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 174
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQGE WW KF+ GELKYTRPYLIEIM+S IQISNLT +NSPSW++HPVYS
Sbjct: 175 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 234
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
++ +Q +TILAPVT PNTDGINPDSCTNTRIEDCYIVSGDDC+AVKSGWDQYGI YGMP
Sbjct: 235 RNIFIQSLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 294
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL+IRRLTCISP SAVIALGSEMSGGI+DVRAEDI AI+SESG+RIKTA+GRGG+VKD
Sbjct: 295 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 354
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
VYVR MTM TMK+ FW+TGSYGSHPD +YDP ALPVIQNINY+DMVAENVTM A+L GI+
Sbjct: 355 VYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 414
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
GD FTGICISNVTI L+ KPKK+ WNCTD++G +SGVTP+PC+LLP+ +P CNFP+
Sbjct: 415 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 474
Query: 461 NRLPVENMGVQMC 473
+ +P++ + +Q C
Sbjct: 475 DPIPIDEVKLQRC 487
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/472 (70%), Positives = 395/472 (83%), Gaps = 1/472 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARN-SDWFEYSAISCRAHSASLEEFGGVGD 63
K R QVI ++ V ++ L++ ESRK + F+Y AI+CR HSASL +FGGVGD
Sbjct: 6 KDHMRVQVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF++AI HLS++ S+GG+QL+VP GKWLTGSF+L SHFTL+L+KDAVLLASQD
Sbjct: 66 GKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWP IEPLPSYGRGRD GRY+SLIFGTNLTDV++TG NGTIDGQG WW+KF +
Sbjct: 126 ISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S IQISNLTL+NSPSWN+HPVYSS++I++G+TI+APV SPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTNTRIEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISP SA IALGS
Sbjct: 246 PDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAAIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+RMTM TMKW FW+TG+YGS
Sbjct: 306 EMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D++YDP ALP I INYRD+VA+NVTMAARLEGI+ DPFTGICI+NVTI + K KK
Sbjct: 366 HADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAAKAKKQ 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
W CTDI GI+SGVTPKPC LPD P + C+FP LP++ + ++ C+Y
Sbjct: 426 PWTCTDIEGITSGVTPKPCNSLPDQGPEKIKACDFPQGNLPIDMLELKKCAY 477
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/438 (74%), Positives = 383/438 (87%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
FEYSA++CRAHSASL EFGGVGDG TSNTKAF+ AI LS++ ++GG+QLFVP GKWLTG
Sbjct: 36 FEYSAMNCRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGKWLTG 95
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
SF+LTSHFTL+LHKD+VLLASQD EWPV++ LPSYGRGRD GRYSSLIFGTNLTDV+
Sbjct: 96 SFSLTSHFTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNLTDVI 155
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
+TG+NGTIDGQGE WW++F +LKYTRPYLIEIM+S +IQISNLTL+NSPSWNVHPVYS
Sbjct: 156 VTGENGTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYS 215
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++IVQGITI+AP++SPNTDGINPDSCTNT+IEDCYIVSGDDCVAVKSGWD+YGI++GMP
Sbjct: 216 SNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMP 275
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
TKQL+IRRLTCISP+SA IALGSEMSGGIQDVRAEDI AI++ES VRIKTAVGRG +VKD
Sbjct: 276 TKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKD 335
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
+YVRRMT+ TMKWAFW+TG+YGSH D NYD +A P I INYRD+VAENVTMAARLEGIA
Sbjct: 336 IYVRRMTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIA 395
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
PFTGIC+SNVTI L K KK W CTDI GI+SGVTP PC LLPD + C+FP
Sbjct: 396 DHPFTGICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGCDFPT 455
Query: 461 NRLPVENMGVQMCSYKAN 478
+ +P++ + ++ C+Y +N
Sbjct: 456 DDIPIDTVEIKKCTYTSN 473
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/474 (70%), Positives = 389/474 (82%), Gaps = 4/474 (0%)
Query: 1 MGSLKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGG 60
M + T+ + + +I +V I+ SL + E R + S+ YSAISCR HSA L +FGG
Sbjct: 1 MENYPTSAKHYIFKVIPVVLILGSLGSRLGECRNVKISNTISYSAISCRKHSAVLTDFGG 60
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
VGDG TSNTK F+ AI +LS++ +GG+QL +P GKWLTGSFNLTSHFTLFLHK+AVLLA
Sbjct: 61 VGDGKTSNTKVFQTAIANLSKYSPDGGAQLIIPAGKWLTGSFNLTSHFTLFLHKEAVLLA 120
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
SQDE EWP++ PLPSYGRGRD GGR+SSLIFGTNL DVVITG+NGTIDGQG WW KF
Sbjct: 121 SQDEAEWPILPPLPSYGRGRDATGGRFSSLIFGTNLKDVVITGNNGTIDGQGATWWNKFH 180
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
G L TRPYLIE++YS IQISNL LINSPSWNVHP YSS+V++QG+TILAPV SPNTD
Sbjct: 181 KGLLNQTRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTD 240
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GINPDSCTNTRIEDCYIVSGDDC+AVKSGWDQYGI +GMPTK+L+IRRLTCISP SA IA
Sbjct: 241 GINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIA 300
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
LGSEMSGGIQDVRAEDITAI+++SG+RIKTA GRG +VKD++VRRM KTMK+ FW+TGS
Sbjct: 301 LGSEMSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGS 360
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
YGSHPD YDP+ALP+I INYRD+VAENVT +ARLEGI DPFTGICISN I LT KP
Sbjct: 361 YGSHPDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKP 420
Query: 421 KKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
+KLQWNCTDI G++S V P+PC LL P + EC FP +RLP+EN+ ++ CS
Sbjct: 421 EKLQWNCTDIEGVTSNVNPRPCSLL----PGKRLECPFPKDRLPIENVKLKTCS 470
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/477 (70%), Positives = 400/477 (83%), Gaps = 1/477 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKAR-NSDWFEYSAISCRAHSASLEEFGGVGD 63
KT R Q+I I L + ++ + VESRKA+ + F Y+ I+CRAHSASL +FGGVGD
Sbjct: 6 KTHIRVQMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF++AI HLS++ S+GGSQL+VP GKWLTGSF+LTSHFTL+L +DAVLLASQD
Sbjct: 66 GNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWPV+EPLPSYGRGRD GR+ SLIFGTNLTDV++TG NGTIDGQG WW++F +
Sbjct: 126 ITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S +IQISNLTL+NSPSWNVHPVYSS++I+QGITI+AP++SPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTNT+IEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISPFSA IALGS
Sbjct: 246 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+R TM TMKWAF +TG Y S
Sbjct: 306 EMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D ++DP+ALP I NINYRD+VAENVT+AAR +GI+ DPF GICI+NVT+ + K KK
Sbjct: 366 HADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKR 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
W CTDI G++SGVTP PC+LLPD P + C+FP LP++N+ ++ CSY Y+
Sbjct: 426 SWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSMKYV 482
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/477 (70%), Positives = 399/477 (83%), Gaps = 1/477 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKAR-NSDWFEYSAISCRAHSASLEEFGGVGD 63
KT R Q+I I L + ++ + VESRKA+ + F Y+ I+CRAHSASL +FGGVGD
Sbjct: 6 KTHIRVQMIQIFLAIFVVTLVYPERVESRKAKIVTTSFVYNGINCRAHSASLTDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF++AI HLS++ S+GGSQL+VP GKWLTGSF+LTSHFTL+L +DAVLLASQD
Sbjct: 66 GNTSNTKAFQSAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDRDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWPV+EPLPSYGRGRD GR+ SLIFGTNLTDV++TG NGTIDGQG WW++F E
Sbjct: 126 ITEWPVLEPLPSYGRGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKE 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S +IQISNLTL+NSPSWNVHPVYSS++I+QGITI+AP++SPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTNT+IEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISPFSA IALGS
Sbjct: 246 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITAI +ESGVRIKTAVGRGG+VKD+YV+R TM TMKWAF +TG Y S
Sbjct: 306 EMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D ++DP+ALP I NINYRD+VAENVT+AAR +GI DPF GICI+NVT+ + K KK
Sbjct: 366 HADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLGMAVKAKKR 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
W CTDI G++SGVTP PC+LLPD P + C+FP LP++N+ ++ CSY Y+
Sbjct: 426 SWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSMKYV 482
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/472 (69%), Positives = 399/472 (84%), Gaps = 1/472 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARN-SDWFEYSAISCRAHSASLEEFGGVGD 63
K+ + + ++ + ++ +++ E RK + S FEYSA++CRAHS SL++FGGVGD
Sbjct: 6 KSHMKIHAMKLVYALLLVTLMSSKVTECRKGKIISTSFEYSALNCRAHSVSLKDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAFK+AI HLS+ SEGGSQL+VP GKWLTGSF+L SHFTL+LHKDAVLLASQD
Sbjct: 66 GKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSFSLISHFTLYLHKDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWPVI+PLPSYGRGRD GR++SLIFGTNLTDV++TGDNGTIDGQG WW++F +
Sbjct: 126 INEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
LKYTRPYLIE+M+S NIQISNLTL++SPSWN+HPVYSS++I++GITI+AP+ SPNTDGIN
Sbjct: 186 LKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
PDSCTNT+IEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+IRRLTCISP+SA IALGS
Sbjct: 246 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSGGIQDVRAEDITA+ +ESG+RIKTAVGRGG+VKD+YV++MTM TMKWAFWITG+YGS
Sbjct: 306 EMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGS 365
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
H D NY+ ALP I+NI+YRDMVA+NV+MA LEGI+ DPFTGICISNVTI + K KK
Sbjct: 366 HADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQ 425
Query: 424 QWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
W C DI GI+SGVTPKPC+LLP+ +C+FP + LP++ + ++ C+Y
Sbjct: 426 PWTCNDIEGITSGVTPKPCDLLPEQGKENIRDCDFPSDYLPIDMLELKQCTY 477
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/469 (67%), Positives = 394/469 (84%), Gaps = 7/469 (1%)
Query: 14 CIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
CI+ ++ + +L T R +++ + FEY+AI CR+HSAS+ E+GGVGDG T NTKAF+
Sbjct: 7 CIVTII-TLSNLITISQGRRVSQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQ 65
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL 133
+A+DHLS++ SEGG+QLFVP GKWLTGSFNLTSHFTLFLHKDA+LLA+QD E+P+++ L
Sbjct: 66 SAVDHLSQYSSEGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKAL 125
Query: 134 PSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
PSYGRGRD GGR++SLIFGTNL+DV+ITG+NGTIDGQG WW+KF G+LKYTRPYLIE
Sbjct: 126 PSYGRGRDAAGGRFASLIFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIE 185
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+M+S IQISNLT ++SPSWN+HPVYSS++IV+G+TI+APV SPNTDGINPDSCTNTRIE
Sbjct: 186 LMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIE 245
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYI+SGDDC+AVKSGWD+YGI++GMPTK L+IRRLTCISP+SA IALGSEMSGGI+DVR
Sbjct: 246 DCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVR 305
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
AEDITA +ESGVRIKTAVGRG FVK++YV+ M + TMKW FW+TG+Y +H D++YDPHA
Sbjct: 306 AEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHA 365
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
LP I INYRD+VAENV+MA RLEGI+GDPFTGICISN TI + K KK W C+D+ G+
Sbjct: 366 LPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGV 425
Query: 434 SSGVTPKPCELLPDHEPAQTTE------CNFPDNRLPVENMGVQMCSYK 476
+SGV PKPC+LL E T + C+FP + L ++N+ ++ CSY+
Sbjct: 426 TSGVDPKPCDLLDGQESETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQ 474
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/468 (66%), Positives = 392/468 (83%), Gaps = 6/468 (1%)
Query: 14 CIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
CI+ ++ + +L T R ++ + FEY+AI+CR+HSAS+ E+GGVGDG T NTKAF+
Sbjct: 7 CIVTII-TLSNLITTSQGRRVLQSFETFEYTAITCRSHSASITEYGGVGDGKTLNTKAFQ 65
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL 133
+A+DHLS++ S+GG+QLFVP GKWLTGSFNLTSHFTLFLHKDA+LLA+QD E+P+++ L
Sbjct: 66 SAVDHLSQYSSDGGAQLFVPAGKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKAL 125
Query: 134 PSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
PSYGRGRD GGR++SL FGTNL+DV+ITG+NGTIDGQG WW+KF G+LKYTRPYLIE
Sbjct: 126 PSYGRGRDAAGGRFASLFFGTNLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIE 185
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+M+S IQISNLT ++SPSWN+HPVYSS++IV+G+TI+APV SPNTDGINPDSCTNTRIE
Sbjct: 186 LMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIE 245
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYI+SGDDC+AVKSGWD+YGI++GMPTK L+IRRLTCISP+SA IALGSEMSGGI+DVR
Sbjct: 246 DCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVR 305
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
AEDITA +ESGVRIKTAVGRG FVK++YV+ M + TMKW FW+TG+Y +H D++YDPHA
Sbjct: 306 AEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHA 365
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
LP I INYRD+VAENV+MA RLEGI+GDPFTGICISN TI + K KK W C+D+ G+
Sbjct: 366 LPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGV 425
Query: 434 SSGVTPKPCELLPDHEPAQTTE-----CNFPDNRLPVENMGVQMCSYK 476
+SGV PKPC+LL E + C+FP + L ++N+ ++ CSY+
Sbjct: 426 TSGVDPKPCDLLDGQESETKKKMIDGGCDFPTDVLEIDNVELKTCSYQ 473
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/480 (68%), Positives = 396/480 (82%), Gaps = 9/480 (1%)
Query: 5 KTAKRTQVI---CIILLVGIIISLNTNGVESRKARNSDW-FEYSAISCRAHSASLEEFGG 60
K R QVI C +LL ++ S T RKA+ D FEY+A++CRAHSASL +FGG
Sbjct: 22 KAHMRVQVIRLVCALLLATLVSSEAT----ERKAKIVDTSFEYNALNCRAHSASLTDFGG 77
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
VGDG TSNTKAF++AI +LS++ S+GG+QL+VP GKWLTGSF++TSHFTL+L+KDAVLLA
Sbjct: 78 VGDGNTSNTKAFQSAISYLSQYASKGGAQLYVPAGKWLTGSFSMTSHFTLYLNKDAVLLA 137
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
SQD EWPVI+PLPSYGRGRD GRY+S IFGTNLTDV++TGDNGTIDGQG WW++F
Sbjct: 138 SQDMNEWPVIKPLPSYGRGRDAPAGRYTSFIFGTNLTDVIVTGDNGTIDGQGAFWWQQFY 197
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L YTRPYLIE+M+S IQISNLT +NSPSWNVHPVYSS++I++G+TI+APV SPNTD
Sbjct: 198 NKRLNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPNTD 257
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GINPDSCTNTRIEDCYIVSGDDCVAVKSGWD++GI +G PTKQL+IRRLTCISP SA IA
Sbjct: 258 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQSAAIA 317
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
LGSEMSGGIQDVRAEDITAI +ESGVRIKT++GRGG+VKD+YVRRMTM TMKWAFW+TG+
Sbjct: 318 LGSEMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAFWMTGN 377
Query: 361 YGSHPDN-NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
YGS+ +N +YDP ALP I+ INYRD+VA+NVTMAA LEGI+ PFTGICI+NVTI + +K
Sbjct: 378 YGSYANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTISMADK 437
Query: 420 PKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANY 479
+ W CTDI GI+SGVTPKPC L D P + C+FP LP++ + ++ C+Y +
Sbjct: 438 ANEKPWTCTDIEGITSGVTPKPCNSLLDKGPEKIKTCDFPPEILPIDLLELKKCTYNIKH 497
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/454 (73%), Positives = 365/454 (80%), Gaps = 47/454 (10%)
Query: 27 TNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG 86
TNG ESRK D+FEYSAI+CRAHSASL +FGGVGDGTTSNTKAF+AAIDHLS+F S+G
Sbjct: 27 TNGAESRKHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDG 86
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
GSQLFVPPG+WLTGSFNLTSHFTL+LHKDAVLLASQDE EWPVI+PLPSYGRGRDT+GGR
Sbjct: 87 GSQLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGR 146
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
Y SLIFGTNLTDVVITG+NGTIDGQG LWW KF GELKYTRPYLIEIM+S N+QIS+LT
Sbjct: 147 YISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLT 206
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
L+NSPSWNVHPVYSS+VI+QG+TI APVTSPNTDGINPDSCTNTRIEDCYIVSGDDC+AV
Sbjct: 207 LVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAV 266
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326
KSGWD+YGIAYGMPTKQL+IRRLTCISPFSA IALGSEMSGGI+DVRAEDI AID+ESGV
Sbjct: 267 KSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGV 326
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
RIKTA INYRDMV
Sbjct: 327 RIKTA-----------------------------------------------GINYRDMV 339
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLP 446
AENVTMA RLEGI+GDPFTGICISNVTI L K KK W CTDI GI+SGV P+PC+LLP
Sbjct: 340 AENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLP 399
Query: 447 DHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
D P + CNFP + LP++ + VQ CSY YL
Sbjct: 400 DQGPEKIVACNFPTDSLPIDTVEVQTCSYWGKYL 433
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/443 (71%), Positives = 369/443 (83%), Gaps = 3/443 (0%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E R + E+ A++CR HSA L +FGGVGDG TSNTKAF++AID LS+ S+GG+ L
Sbjct: 34 ECRSKQPLGNLEFLALNCRKHSAVLTDFGGVGDGKTSNTKAFRSAIDKLSKLASDGGAAL 93
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
VPPGKWLTGSFNLTSHFTL++HKDAVLL SQ E EWP + LPSYGRGRD GGR SSL
Sbjct: 94 VVPPGKWLTGSFNLTSHFTLYIHKDAVLLGSQVESEWPRLPVLPSYGRGRDAAGGRLSSL 153
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
IFGTNLTDVV+TG NGTIDGQG WW KF+ +L TRPYLIEIMYS +QISNLT +NS
Sbjct: 154 IFGTNLTDVVVTGANGTIDGQGAYWWGKFKKNQLDVTRPYLIEIMYSNQVQISNLTFVNS 213
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSWNVHP+YSS+VI+QG+TILAPV SPNTDGI+PDSCT+ RIEDCYIVSGDDC+AVKSGW
Sbjct: 214 PSWNVHPIYSSNVIIQGLTILAPVDSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGW 273
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
DQYGI GMPT++L+IRR+TCISP SA IALGSEMSGGI+DVRAEDITAID++SGVRIKT
Sbjct: 274 DQYGIKVGMPTQRLVIRRVTCISPDSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKT 333
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV 390
VGRGG+VKD+YVRRMTMKTMK+ FW+TGSYG HPD +DP ALP I INYRDMVAENV
Sbjct: 334 GVGRGGYVKDIYVRRMTMKTMKYVFWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENV 393
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEP 450
T +ARL+GI DPF GICI NVTI LT KPK+LQWNCTD+ G++S VTP C LLP+ +P
Sbjct: 394 TYSARLDGIPNDPFKGICIFNVTITLTKKPKELQWNCTDVQGVTSRVTPPACSLLPEKKP 453
Query: 451 AQTTECNFPDNRLPVENMGVQMC 473
+C FP +RLPVE++ ++ C
Sbjct: 454 V---DCPFPADRLPVEDLKLKRC 473
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/433 (72%), Positives = 368/433 (84%), Gaps = 4/433 (0%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
EY AI+CR HSA L +FGGVGDG TSNTKAFKAAI LS++ S+GG+QL VPPGKWLTGS
Sbjct: 21 EYQAINCRKHSAVLTDFGGVGDGKTSNTKAFKAAIAELSQYASDGGAQLIVPPGKWLTGS 80
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
FNL+SHFTLFLHKDAVLLASQDE EWP PLPSYG GRD GR+SSLIFGT+LTDVV+
Sbjct: 81 FNLSSHFTLFLHKDAVLLASQDEAEWPAFPPLPSYGVGRDEHAGRFSSLIFGTHLTDVVV 140
Query: 162 TGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
TG+NGTIDGQG +WW KF +LK TRPYLIE +YS +QISNLTLINSPSWNVHP Y S
Sbjct: 141 TGNNGTIDGQGAVWWDKFHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTYCS 200
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+V++Q +TILAPV SPNTDGINPDS +N RIED ++VSGDDC+AVKSGWD+YGI +G PT
Sbjct: 201 NVLIQWLTILAPVDSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPT 260
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
+ L+IRR TCISP SA IALGSEMSGGIQDVRAEDITA+ ++SGVRIKTAVGRG +VKD+
Sbjct: 261 QHLVIRRFTCISPDSATIALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDI 320
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG 401
+VRRMT+KTMK+AFW+TGSYGSHPD YDP ALP I+ I+Y+D+VAENVT +ARLEGI
Sbjct: 321 FVRRMTLKTMKYAFWMTGSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLEGIEN 380
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDN 461
DPFTGICISNV I LT KPK+LQWNCTDI G+SS VTP+PC L + ++ EC FP++
Sbjct: 381 DPFTGICISNVNISLTQKPKELQWNCTDIQGVSSKVTPQPCAALLE----KSIECPFPED 436
Query: 462 RLPVENMGVQMCS 474
RLP+E++ +Q CS
Sbjct: 437 RLPIEDVKLQTCS 449
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/469 (68%), Positives = 385/469 (82%), Gaps = 3/469 (0%)
Query: 8 KRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTS 67
+ + VI +I LV ++ SLN + R A EY AI+CR HSA L +FGGVGDG TS
Sbjct: 8 QNSYVIGVISLVLMLGSLNVKVAQCRVASKLVNIEYPAINCRKHSAVLTDFGGVGDGKTS 67
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NTKAF++AI LSR S+GG+QL VPPGKWLTGSFNLTSHFTLFLHKDAV+LASQDE EW
Sbjct: 68 NTKAFQSAISKLSRVASDGGAQLIVPPGKWLTGSFNLTSHFTLFLHKDAVILASQDESEW 127
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT 187
P + LPSYGRGRD GGR+SSLIFGT+LTDVVITG NGTIDGQG WW KF +L T
Sbjct: 128 PQLPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLT 187
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RPY+IEIMYS IQISNLTL+NSPSW VHP+YSS++ ++G+TILAPV SPNTDGI+PDSC
Sbjct: 188 RPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSC 247
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
TNTRIEDCYIVSGDDCVAVKSGWD+YGI +G PT+ L+IRRLTCISP SA+IALGSEMSG
Sbjct: 248 TNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSG 307
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
GIQDVR EDITAI+++S VRIKTAVGRGG+VKD++V+ MT+ TMK+ FW+TGSYGSHPD
Sbjct: 308 GIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDP 367
Query: 368 NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
+DP ALP I INYRD+VA NVT +A+LEGI+ DPFTGICISNV+I+++ + KKLQWNC
Sbjct: 368 AFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNC 427
Query: 428 TDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYK 476
TD+ G++S VTP C+LLP+ +C FP+++L +EN+ ++ CS +
Sbjct: 428 TDVAGVTSNVTPNTCQLLPEK---GKFDCPFPNDKLSIENVQLKTCSLQ 473
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/470 (68%), Positives = 384/470 (81%), Gaps = 3/470 (0%)
Query: 10 TQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNT 69
+QVI I LV I+ SLN VE + R EY AI+CR HSA L +FGGVGDG TSNT
Sbjct: 9 SQVIGAISLVLILGSLNVKVVECKVGRGLKNTEYYAINCRKHSAVLTDFGGVGDGKTSNT 68
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
KAF++AI L ++ S+GG+QL VPPGKWLTG FNLTSHFTLFLHKDAV+LASQ E EWP
Sbjct: 69 KAFQSAIRKLGQYASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKDAVILASQVESEWPQ 128
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRP 189
+ LPSYGRGRD GGR+SSLIFGT+LTDVVITG NGTIDGQG WW KF +L TRP
Sbjct: 129 LPVLPSYGRGRDAPGGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKNQLNLTRP 188
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
Y+IEIMYS IQISNLTL+NSPSW VHP+YSS++ ++G+TILAPV SPNTDGI+PDSCTN
Sbjct: 189 YMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPDSCTN 248
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
TRIEDCYIVSGDDCVAVKSGWD+YGI +G PT+ L+IRRLTCISP SA+IALGSEMSGGI
Sbjct: 249 TRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAMIALGSEMSGGI 308
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
QDVR EDITAI+++S VRIKTAVGRGG+VKD++V+ MT+ TMK+ FW+TGSYGSHPD +
Sbjct: 309 QDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMTGSYGSHPDPAF 368
Query: 370 DPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
DP ALP I INYRD+VA NVT +A+LEGI+ DPFTGICISNV+I+++ + KKLQWNCTD
Sbjct: 369 DPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSEQKKKLQWNCTD 428
Query: 430 ITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANY 479
+ G++S VTP C+LLP+ +C FP+++L +EN+ ++ CS K +
Sbjct: 429 VAGVTSNVTPNTCQLLPEK---GKFDCPFPNDKLSIENVQLKTCSIKKVF 475
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/477 (66%), Positives = 386/477 (80%), Gaps = 8/477 (1%)
Query: 4 LKTAKRTQVICIILLVGIIISLNTNGV---ESRKARNSDWFEYSAISCRAHSASLEEFGG 60
+KT + C++ ++ ++ L GV E R A D FEY AISCR HSA L +FGG
Sbjct: 1 MKTCPKLSNSCVVGVIFTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGG 60
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
VGDG TSNTKAF+ AI +LS + S+GG+ L VPPGKWLTGSFNLTSHFTLFL K+A +L
Sbjct: 61 VGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILG 120
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
SQDE EWP + LPSYGRGRD GR+SSLIFGTNLTDVVITG NGTIDGQG WW KF
Sbjct: 121 SQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVVITGYNGTIDGQGSYWWDKFH 180
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
GELK TRPY+IEIM+S +IQISNLTLI+SPSW VHP+YSS +I+QG+TILAPV SPNTD
Sbjct: 181 KGELKLTRPYMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPNTD 240
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GINPDSC+NTRIEDCYIVSGDDCVA+KSGWD+ GI +GMP++ +IIRRL C+SP SA+IA
Sbjct: 241 GINPDSCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAMIA 300
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
LGSEMSGGI+DVRAE++TA++++S VRIKTAVGRG +V+D++V+ M + TMK+ FW+TGS
Sbjct: 301 LGSEMSGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMTGS 360
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
YGSHP+ ++DP ALP I INYRD++A+NVT +ARLEGIA DPFTGICISNVTI +
Sbjct: 361 YGSHPNTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIH--SGK 418
Query: 421 KKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKA 477
KK QWNCTDI G++S V PKPCELLP E EC +PD++LP+E++ ++ CS+K+
Sbjct: 419 KKPQWNCTDIEGVTSNVYPKPCELLPLKE---KIECPYPDDKLPIESVQLKTCSFKS 472
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/477 (65%), Positives = 384/477 (80%), Gaps = 7/477 (1%)
Query: 4 LKTAKRTQVICIILLVGIIISLNTNGV---ESRKARNSDWFEYSAISCRAHSASLEEFGG 60
+K + C++ ++ ++ L GV E R A D FEY AISCR HSA L +FGG
Sbjct: 1 MKPCPKLSNSCVVGVIYTVLLLGLQGVRVVECRVANGLDCFEYPAISCRKHSAVLTDFGG 60
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
VGDG TSNTKAF+ AI +LS + S+GG+ L VPPGKWLTGSFNLTSHFTLFL K+A +L
Sbjct: 61 VGDGKTSNTKAFQYAISNLSHYASDGGALLVVPPGKWLTGSFNLTSHFTLFLQKEATILG 120
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
SQDE EWP + LPSYGRGRD GR+SSLIFGTNLTDV+ITG NGTIDGQG WW KF
Sbjct: 121 SQDESEWPTLPVLPSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWDKFH 180
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
GELK TRPY+IEIM+S +IQISNLTLINSPSW VHP+Y+S +I+QG+TILAPV SPNTD
Sbjct: 181 KGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPNTD 240
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GI+PDSC+N RIEDCYIVSGDDCVA+KSGWD+YGI +GMP++ +IIRRL C+SP SA+IA
Sbjct: 241 GIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAMIA 300
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
LGSEMSGGIQDVRAED+TAI+++S VRIKTAVGRG +V+D++++ M + TMK+ FW+TGS
Sbjct: 301 LGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMTGS 360
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
Y SHPDN +DP LP I INYRD++AENVT +ARLEGIA DPFTGICISNVTI +
Sbjct: 361 YSSHPDNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIH--SGK 418
Query: 421 KKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKA 477
KKLQWNCTDI G++S V PKPCELLP + + EC +PD+++ +E++ ++ CS+K+
Sbjct: 419 KKLQWNCTDIEGVTSNVYPKPCELLPLKQ--EKIECPYPDDKVSIESVQLKTCSFKS 473
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/461 (67%), Positives = 380/461 (82%), Gaps = 5/461 (1%)
Query: 17 LLVGIIISLNTNGVESRKARNS--DWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKA 74
LLV + I L +ESR RNS E+SA++CR HSA L +FG VGDG TSNTKAF+
Sbjct: 8 LLVFLAIFLFP-AIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRN 66
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AI LS+ ++GG+QL VPPGKWLTGSFNLTSHFTLF+ + A +LASQDE EWPVI PLP
Sbjct: 67 AISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLP 126
Query: 135 SYGRGRDTEG-GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
SYG+GRD G GR++SLI GTNLTDVVITG+NGTI+GQG+ WW KF+ + K TRPYLIE
Sbjct: 127 SYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIE 186
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
I++S+NIQISN+TLI+SPSWN+HPVY +SVIV+ +T+LAPVT PNTDGINPDSCTNT IE
Sbjct: 187 ILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIE 246
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYIVSGDDC+AVKSGWDQYGI +GMPT+QL IRRLTCISP SA +ALGSEMSGGI+DVR
Sbjct: 247 DCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVR 306
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
ED+T ++ES +RIKTAVGRG +VKD+Y RR+TMKTMK+ FW++G+YGSHPD +DP A
Sbjct: 307 IEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKA 366
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
LP I NINYRDM AENVTM+A L+GI DPFTGICISNVTI L K KK+QWNCTD+ G+
Sbjct: 367 LPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGV 426
Query: 434 SSGVTPKPCELLPDHEP-AQTTECNFPDNRLPVENMGVQMC 473
+S VTP+PC LLP+ + A+ +C FP + +P+E++ ++ C
Sbjct: 427 TSRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 467
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/480 (65%), Positives = 387/480 (80%), Gaps = 8/480 (1%)
Query: 3 SLKTAK--RTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGG 60
++K+A+ + VI +I +V I+ SL V S N+ F+Y AI+CR HSA L +FG
Sbjct: 5 NMKSARFENSYVIGVISVVLILGSLAECRVPSSIKLNN--FDYPAINCRKHSAVLTDFGA 62
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
VGDG T NTKAF AAI +LS++ ++GG+QL VPPGKWLTGSFNLTSHFTLFL KDAV+L
Sbjct: 63 VGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILG 122
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
SQDE EWP + LPSYGRGRD GR+SSLIFGTNLTDV+ITGDNGTIDGQG WW KF
Sbjct: 123 SQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFH 182
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
+L TRPY+IEIMYS IQISNLTLINSP+W VHP+YSS++I+ G+TILAPV SPNTD
Sbjct: 183 KKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTD 242
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GINPDSCTN RIED +IVSGDDC+A+KSGWD+YGI GMP++Q+IIRRLTCISP SA++A
Sbjct: 243 GINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVA 302
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
LGSEMSGGIQDVR ED+TAI++ES +RIK+AVGRG FVKD++V+ M + TMK+ FW+TGS
Sbjct: 303 LGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGS 362
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
YG HPDN +DP+ALP I INYRD+ A+NVT+A +LEGI+ DPFTGIC+SNVTIE++
Sbjct: 363 YGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHK 422
Query: 421 KKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
KKL WNCTDI+G++S V PKPCELL + E EC FP ++L +EN+ + C+++++
Sbjct: 423 KKLPWNCTDISGVTSNVVPKPCELLQEKE----IECPFPTDKLAIENVQFKTCNFQSSVF 478
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/432 (71%), Positives = 371/432 (85%), Gaps = 5/432 (1%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
CR HSA L EFGG+GDG TSNTKAFK AIDHL +F ++GG++L VPPGKWLTGSFNLTSH
Sbjct: 1 CRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLTSH 60
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
FTL++HKDAV+L SQ+E ++P I PLPSYG+GRD GGR+SSLIFGTNLTDVVI G NGT
Sbjct: 61 FTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGNGT 119
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
I+GQG +WW KF+ +L TRPYLIEIM+S +QISNLTLI+SPSWNVHPVY S VI+QG
Sbjct: 120 INGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQG 179
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAPV PNTDGINPDSC N +IEDCYIVSGDDC+AVKSGWDQYGI YG+PT+ ++IR
Sbjct: 180 MTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIR 239
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
RLTCISP SAVIALGSEMSGGI++VRAEDITAI+S+SGVRIKT VGRGG+V+D+Y R+MT
Sbjct: 240 RLTCISPDSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMT 299
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
MKTMK+ FW+T YGSHPD+ +D A+P I+NINYR++VAENVT +ARL+GIAGD FTGI
Sbjct: 300 MKTMKYVFWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGI 359
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE-PAQTTECNFPDNRLPVE 466
CIS+VTI LT KPK+LQWNCT++ G++S VTP+ C+LLP + P Q C FP+N+LP+E
Sbjct: 360 CISDVTIRLTQKPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQ---CTFPENQLPIE 416
Query: 467 NMGVQMCSYKAN 478
+ ++ CSY A+
Sbjct: 417 AVKLKTCSYTAS 428
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/460 (68%), Positives = 378/460 (82%), Gaps = 12/460 (2%)
Query: 15 IILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKA 74
++++VG+++S R EY AI+CR HSA L +FG GDG T NTKAFK+
Sbjct: 17 VLVVVGLLMS---------SVRGGGSEEYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKS 67
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AI +LS+ +GG+QL VPPGKWLTGSFNLTSHFTLF+HKDAV+L +QDE +P+IE LP
Sbjct: 68 AIANLSQVAGDGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDAVILGAQDEAAYPLIEILP 127
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEI 194
SYG GRD GGR++SLIFGTNLTDVVITG NGTI GQG+ WW KFRA +LK TRPYLIEI
Sbjct: 128 SYGAGRDG-GGRHASLIFGTNLTDVVITGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEI 186
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
MYS +QISNL LI+SPSWNVHP YSS+VI+Q +TI+APV SPNTDGINPDS N IED
Sbjct: 187 MYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPNTDGINPDSSKNVLIED 246
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA 314
C+IVSGDDC+AVKSGWDQYGI +GMPT+ LIIRRLTCISP SAVIALGSEMSGGI++VRA
Sbjct: 247 CFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRA 306
Query: 315 EDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL 374
E+ITAIDSESGVRIK+ VGRGG+VKD+Y R MTMKTMK+ FW+TG YG HPD+ +DP AL
Sbjct: 307 ENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDPKAL 366
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS 434
P I+NINYRDMVAENVT +ARL+GI+GDPFTGICISNV I LT KPKKLQWNCT++ G+S
Sbjct: 367 PKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVS 426
Query: 435 SGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
S VTP C+LL H + C FP+++LP+E++ +++CS
Sbjct: 427 SQVTPPSCDLL--HPSKKVFNCPFPEDKLPIEDVQMKICS 464
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/463 (66%), Positives = 380/463 (82%), Gaps = 6/463 (1%)
Query: 16 ILLVGIIISLNTNGVESRKARN--SDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
IL++ I+S +ESR +N S +SA++CR HSA L +FG VGDG TSNT AFK
Sbjct: 8 ILVILAILSFP--AIESRSHQNVVSSGIRFSALNCRKHSAILTDFGAVGDGKTSNTNAFK 65
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL 133
AI LS+ ++GG+QL VPPGKWLTGSFNLTSHFTLF+ + A +LASQDE EWPVI PL
Sbjct: 66 KAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPL 125
Query: 134 PSYGRGRDTEG-GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLI 192
PSYG+GRD G GR++SLI GTNLTDVVITG+NGTI+GQG+ WW KF+ + K TRPYLI
Sbjct: 126 PSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKLTRPYLI 185
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
E+++S+NIQISN+TLI+SPSWN+HPVY ++VIV+ +T+LAPVT PNTDGINPDSCTNT I
Sbjct: 186 ELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPNTDGINPDSCTNTLI 245
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDCYIVSGDDC+AVKSGWDQYGI +GMPT+QL IRRLTCISP SA +ALGSEMSGGI+DV
Sbjct: 246 EDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDV 305
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
R ED+T ++ES +RIKTA GRG +VKD++ RR+TMKTMK+ FW++G+Y SHPD +DP
Sbjct: 306 RIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMSGNYNSHPDEGFDPK 365
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432
ALP + NINYRDM AENVTM+A L+GI DPFTGICISNVTI L +K KK+QWNCTD+ G
Sbjct: 366 ALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALADKAKKVQWNCTDVAG 425
Query: 433 ISSGVTPKPCELLPDHE-PAQTTECNFPDNRLPVENMGVQMCS 474
++S VTP+PC LLP+ + PA+ +C FP + +P+E++ ++ CS
Sbjct: 426 VTSRVTPEPCSLLPEKKAPAKNEDCAFPSDLIPIESVVLKKCS 468
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/469 (66%), Positives = 385/469 (82%), Gaps = 5/469 (1%)
Query: 7 AKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTT 66
+++ + I+L V I+ L+ E + + + +Y A+ CR HSA L +FG GDG T
Sbjct: 7 SRKPHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGKT 66
Query: 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
NTKAFK+AIDHLS+F +GG++L VPPGKWLTGSFNLTSHFTL++ KDAV+L +QDE
Sbjct: 67 INTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDESA 126
Query: 127 WPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKY 186
+P+IE LPSYG GRD GGR+SSLIFGTNLTDVVITG NGT++GQG+ WW KFRA +
Sbjct: 127 YPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYND 185
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
TRPYLIEIMYS ++QISNLTLI+SPSWNVHPVYS +V+V+ +TILAP+ SPNTDGINPDS
Sbjct: 186 TRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDS 245
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C RIEDC+IVSGDDC+AVKSGWDQYG +GMPTK L+IRRLTCISP SA IALGSEMS
Sbjct: 246 CKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMS 305
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPD 366
GGI++V AEDITAID++SG+RIKT +GRGG+VKD+YVRRMT+KTMK+ FWITG YGSHPD
Sbjct: 306 GGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWITGDYGSHPD 365
Query: 367 NNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWN 426
+ +DP ALPVI+NINYRDMVAENVT +ARL+GI+GDPFTGICISNVTI LT KPK+LQWN
Sbjct: 366 DGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTEKPKELQWN 425
Query: 427 CTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
CT++ G++S VTP+ C+LLP + + C FPD+ P ++ ++ CS+
Sbjct: 426 CTNVAGVTSQVTPRSCDLLPPSD--KVFNCPFPDH--PHWDVKLKTCSH 470
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/463 (66%), Positives = 378/463 (81%), Gaps = 6/463 (1%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
++ +ILL ++SL T VE +++ +++ + AISCR H+A + +FGGVGDG TSNT+
Sbjct: 16 RISAVILLA--LLSLAT--VEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQ 71
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF+ AI+HLS ++GG+QL VPPGKWLTGSFNLTSHFTLF+HKDA +L SQ+E EWP +
Sbjct: 72 AFRRAIEHLSSLAADGGAQLTVPPGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQV 131
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPY 190
LPSYG GRD GGRYSSLIFGTNLTDVVITG+NGTIDGQG WW KF GEL TRPY
Sbjct: 132 ALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPY 191
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
LIEIMYS IQIS+LTL+NSPSW VHP+YS +VI+QG+TILAP+ SPNTDGI+PDSC+NT
Sbjct: 192 LIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNT 251
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RIEDC+IVSGDDC+AVKSGWDQYGI +GMPT+ L+I+RLTCISP SA +ALGSEMSGGI+
Sbjct: 252 RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIR 311
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
+VR E+ T I+++S VRIKTA GRGGFVKD++VR M + TMK+ FW+TG+Y SHPD+ +D
Sbjct: 312 NVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFD 371
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
P ALP I NINYRD+VAENVT +ARLEGI+GDPFT ICISNV I LT PKKLQWNCTD+
Sbjct: 372 PAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDV 431
Query: 431 TGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMC 473
G SS V P PC P + ++ C+FP+++LP+E + ++ C
Sbjct: 432 EGFSSDVVPPPCA--PLAKAGKSGGCDFPEDQLPIERVQLKTC 472
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/469 (64%), Positives = 378/469 (80%), Gaps = 8/469 (1%)
Query: 12 VICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
VI ++L+ G + S K +N F+Y AI+CR HSA L +FGGVGDG T NTKA
Sbjct: 20 VISVLLIFGSLAECKEP--SSSKLKN---FDYPAINCRKHSAVLTDFGGVGDGKTLNTKA 74
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
F +AI +LS++ ++GG+QL VPPGKWLTGSFNLTSHFTLFL KD+V+LASQDE EWP
Sbjct: 75 FNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDSVILASQDESEWPQFP 134
Query: 132 PLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYL 191
LPSYG GR+ GR+SSL+FGTNLTDV+ITG+NGTIDGQG WW KF G++K TRPY+
Sbjct: 135 VLPSYGSGRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITRPYM 194
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
IEIMYS IQISNLTLINSPSW VHPVYSS++I+ G+TILAPV PNTDGI+PDSCTN R
Sbjct: 195 IEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTNVR 254
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
IED YIVSGDDC+A+KSGWD+YGI +G P++Q+IIRRLTCISP SA++ALGSEMSGGIQD
Sbjct: 255 IEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGGIQD 314
Query: 312 VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
VR ED+TAI +ES VRIKTA+GRG +VKD++V+ M + TMK+ FW+TGSY SHPDN +DP
Sbjct: 315 VRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGFDP 374
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
+ALP I INYRD+ A+NVT+A +L+GI+ DPFTGIC+SN TIE++ KKL WNCTD++
Sbjct: 375 NALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTDVS 434
Query: 432 GISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
G++S V+P PCELL + E EC FP ++L +EN+ + C++K++ +
Sbjct: 435 GVTSNVSPTPCELLAEKE---KFECPFPTDKLTIENVQFKTCNFKSSVI 480
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/463 (66%), Positives = 377/463 (81%), Gaps = 6/463 (1%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
++ +ILL ++SL T VE +++ +++ + AISCR H+A + +FGGVGDG TSNT+
Sbjct: 16 RISAVILLA--LLSLAT--VEGKRSCPTNYLQVPAISCRKHTALITDFGGVGDGVTSNTQ 71
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF+ AI+HLS ++GG+QL VP GKWLTGSFNLTSHFTLF+HKDA +L SQ+E EWP +
Sbjct: 72 AFRRAIEHLSSLAADGGAQLTVPXGKWLTGSFNLTSHFTLFVHKDAKILGSQNESEWPQV 131
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPY 190
LPSYG GRD GGRYSSLIFGTNLTDVVITG+NGTIDGQG WW KF GEL TRPY
Sbjct: 132 ALLPSYGVGRDAPGGRYSSLIFGTNLTDVVITGNNGTIDGQGAYWWDKFHKGELNLTRPY 191
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
LIEIMYS IQIS+LTL+NSPSW VHP+YS +VI+QG+TILAP+ SPNTDGI+PDSC+NT
Sbjct: 192 LIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGIDPDSCSNT 251
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RIEDC+IVSGDDC+AVKSGWDQYGI +GMPT+ L+I+RLTCISP SA +ALGSEMSGGI+
Sbjct: 252 RIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIR 311
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
+VR E+ T I+++S VRIKTA GRGGFVKD++VR M + TMK+ FW+TG+Y SHPD+ +D
Sbjct: 312 NVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFD 371
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
P ALP I NINYRD+VAENVT +ARLEGI+GDPFT ICISNV I LT PKKLQWNCTD+
Sbjct: 372 PAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDV 431
Query: 431 TGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMC 473
G SS V P PC P + ++ C+FP+++LP+E + ++ C
Sbjct: 432 EGFSSDVVPPPCA--PLAKAGKSGGCDFPEDQLPIERVQLKTC 472
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/467 (64%), Positives = 377/467 (80%), Gaps = 8/467 (1%)
Query: 13 ICIILLVG-IIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
+C+++L +S++ A + Y A +CRAH+ASL +FGGVGDGTTSNT A
Sbjct: 20 LCLLVLAASAAVSVSGRHHAPTPAHGTGQSMYLAPACRAHTASLADFGGVGDGTTSNTAA 79
Query: 72 FKAAIDHLSRFQSE--GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
F++A+DHLS++ E GG+ L+VP GKWLTG FNLTSHFTLFLH DAV+LASQD EWP+
Sbjct: 80 FRSAVDHLSQYSGEDAGGAMLYVPAGKWLTGPFNLTSHFTLFLHSDAVILASQDINEWPI 139
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRP 189
I+PLPSYGRGRD GGR++SL+ G+NLTDVVITG+NGTIDGQG +WW KF +LKYTR
Sbjct: 140 IDPLPSYGRGRDKIGGRFASLVGGSNLTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRG 199
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
YLIE+M+S I ISNLTL+NSP+WN+HPVYSS+++VQGITILAP SPNTDGINPDSC++
Sbjct: 200 YLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSH 259
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
RIEDCYIVSGDDCVA+KSGWD+YGI+YGMP++ ++IRRLTC+SP SAVIALGSEMSGGI
Sbjct: 260 VRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGI 319
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
QDVRAEDITAI+SESGVRIKTAVGRG +VKDV+VRRMT+ TMKW FW+TG+Y SHPD+ Y
Sbjct: 320 QDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFWMTGNYKSHPDDKY 379
Query: 370 DPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCT 428
DP+A+PV+ NI+Y+D+VA V AARLEGI G PF GIC++NVT +L+ K +K W C
Sbjct: 380 DPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANVTADLS-KSRKYPWTCA 438
Query: 429 DITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
D+ G+S V+P PC+ L + A C FP + LP++ + VQ C+Y
Sbjct: 439 DVEGVSVNVSPAPCQPL---QGAHDGACPFPTDTLPIDQVTVQQCAY 482
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/468 (64%), Positives = 376/468 (80%), Gaps = 11/468 (2%)
Query: 13 ICIILLVG-IIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
+C++LL ++ +G + A S Y A SCRAH+ASL +FGGVGDGTTSNT A
Sbjct: 20 VCVLLLAASATVAARRHGPAAPIAGQS---MYLAPSCRAHTASLTDFGGVGDGTTSNTAA 76
Query: 72 FKAAIDHLSRFQSEGG--SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
FK+A+DHLS++ EGG + L+VP GKWLTG FNLTSHFTLFLH DAV+L SQD EWP+
Sbjct: 77 FKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTSHFTLFLHSDAVILGSQDMGEWPI 136
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRP 189
I+PLPSYGRGRD GGRY+SLI G+NLTDVVITG NGTIDGQG +WW KF + +LKYTR
Sbjct: 137 IDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANGTIDGQGAMWWSKFHSNKLKYTRG 196
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
YLIE+M+S + ISN+TL+NSP+WN+HPVYSS+++VQG+TILAP SPNTDGINPDSC++
Sbjct: 197 YLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQGVTILAPTHSPNTDGINPDSCSH 256
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
RIEDCYIVSGDDCVA+KSGWD+YGIAYGMP++ +++RRLTC+SP SAVIALGSEMSGGI
Sbjct: 257 VRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVSPTSAVIALGSEMSGGI 316
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
DVRAEDITA++SES VRIKTAVGRG +V+DV+VR M++ TMKW FW+TG+Y SHPD+ Y
Sbjct: 317 SDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKWVFWMTGNYKSHPDDGY 376
Query: 370 DPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCT 428
DP+A+PV+ NI+Y+D+VA V AARLEGI G PF GICI+NVT L+ K +K W CT
Sbjct: 377 DPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANVTATLS-KSRKYPWTCT 435
Query: 429 DITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYK 476
DI G+S+GVTP PC+ L + A C FP + LP++ + +Q C+Y
Sbjct: 436 DIEGVSTGVTPAPCQPL---QGAHDGACPFPTDTLPIDQLVMQQCAYS 480
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/440 (66%), Positives = 365/440 (82%), Gaps = 4/440 (0%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
F+Y AI+CR HSA L +FGGVGDG T NTKAF +AI +LS++ ++GG+QL VPPGKWLTG
Sbjct: 52 FDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTG 111
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
SFNLTSHFTLFL KDAV+LASQ E +WP + LPSYGRGR+ GGR+SSLIFGTNL DV+
Sbjct: 112 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 171
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG+NGTIDGQG WW KF+ +LK TRPY+IEIMYS IQISNLTL+NSPSW VHPVYS
Sbjct: 172 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 231
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++I+ G+TILAPV PNTDGI+PDS TN IED YIVSGDDC+A+KSGWD+YGI G P
Sbjct: 232 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 291
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
++ +I+RRLTCISP SA++ALGSEMSGGIQDVR ED+TAI++ES VRIK+AVGRG FVKD
Sbjct: 292 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 351
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
++V+ M + T+K+ FW+TGSYG HPDN +DP+ALP I INYRD+ A+NVT+A ++EGI+
Sbjct: 352 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGIS 411
Query: 401 GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPD 460
DPFTGIC+SNVTIE++ KKL WNCTDI+G++S V PKPCELL + E EC FP
Sbjct: 412 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKE----IECPFPR 467
Query: 461 NRLPVENMGVQMCSYKANYL 480
++LP+EN+ + C+++++
Sbjct: 468 DKLPIENVQFKTCNFQSSVF 487
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/462 (66%), Positives = 371/462 (80%), Gaps = 12/462 (2%)
Query: 13 ICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAF 72
I +I LV I++S+N Y AI+CR HSA L +FGGVGDG TSNTKAF
Sbjct: 17 IGVISLVLILVSVNVKVASG---------VYYAINCRKHSAVLTDFGGVGDGITSNTKAF 67
Query: 73 KAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEP 132
++AI LS++ S+GG+ L VPPGKWLTG FNLTSHFTLFL AV+LASQDE EWP +
Sbjct: 68 QSAISKLSQYASDGGAMLVVPPGKWLTGPFNLTSHFTLFLDFGAVILASQDESEWPQLPV 127
Query: 133 LPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLI 192
LPSYGRGRD GGR+SSLIFGT+LTDVVITG+NG IDGQG WW KF G+L TRPYLI
Sbjct: 128 LPSYGRGRDAPGGRFSSLIFGTHLTDVVITGNNGLIDGQGAYWWNKFHQGQLTLTRPYLI 187
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
EIMYS IQIS LTL+NSP+W VHPVYSS++I++G+TI APV SPNTDGINPDSC+N RI
Sbjct: 188 EIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPNTDGINPDSCSNIRI 247
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDC I SGDDC+AVKSGWD+YGI +GMPT+ LIIRR+TC+SP SA+IALGSEMSGGI DV
Sbjct: 248 EDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAMIALGSEMSGGIYDV 307
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
RAED+TAI++E+ VRIKTA+GRGG+VK+++V+ M + TMK+ FWITG+YG HPD YDP
Sbjct: 308 RAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWITGTYGDHPDPGYDPK 367
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432
ALP I INYRD+VA NVT +ARLEGI+ DPFTGICISNV+I+++ + KKLQWNC++I+G
Sbjct: 368 ALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSEQQKKLQWNCSNISG 427
Query: 433 ISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
++S VTP PC LLP E Q EC FP + LP++N+ ++ C+
Sbjct: 428 VTSNVTPYPCALLP--EKGQ-LECPFPTDTLPIDNVQLKSCN 466
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/466 (63%), Positives = 374/466 (80%), Gaps = 6/466 (1%)
Query: 12 VICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
VIC+I +V I++SL S NS F+Y AI+CR H+A L +FG VGDG T NTKA
Sbjct: 16 VICVISIVLILVSLAECREPSSIKLNS--FDYHAINCRKHNAVLTDFGAVGDGKTLNTKA 73
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
F +AI +LS++ ++GG+QL VPPGKWLTGSFNLTSHFTLFL K AV+LASQDE EWP +
Sbjct: 74 FNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILASQDESEWPKLS 133
Query: 132 PLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYL 191
LPSYGR +D GR+SSLIFGTNLTDVVITG+NGTIDGQG WW KF+ +LK TRPY+
Sbjct: 134 FLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYM 193
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
IEIMYS IQISNLTLINSP+W VHP+YSS++I+ +TILAPV PNTDGI+PDSCTN
Sbjct: 194 IEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVL 253
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
IED YIVSGDDC+A+KSG D YGI G P++++I+RRLTCISP SA++ALGSEMSGGIQD
Sbjct: 254 IEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQD 313
Query: 312 VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
+R EDITAI++ES VRIKTAVGRG +VKD++V+ M + TMK+ FW+TG+Y SH +N +DP
Sbjct: 314 IRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDP 373
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
ALP I INYRD++A+NVT+A +L+GI+ DPFTGICISNVTIE++ + L WNCTD++
Sbjct: 374 KALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVS 433
Query: 432 GISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKA 477
G++S PKPC++LP+ + EC FP ++LP+EN+ + C++++
Sbjct: 434 GVASNAVPKPCDMLPEKK----IECPFPTDKLPIENVQFKTCNFQS 475
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/473 (62%), Positives = 371/473 (78%), Gaps = 6/473 (1%)
Query: 3 SLKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVG 62
+LK + + I ++L + + + S+ N EY A++CR H+A L EFG VG
Sbjct: 9 TLKMIRTSFCILVVLAISSFSMMEARDLASKGKTN---IEYMALNCRKHTAVLTEFGAVG 65
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
DG TSNTKAFK AI L+ ++GG QL VPPGKWLTGSFNLTSHFTLF+ K A +LASQ
Sbjct: 66 DGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQ 125
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG 182
DE E+PV+ PLPSYG+GRD G ++SLI GTNLTDVVITG+NGTI+GQG+ WW K+R+G
Sbjct: 126 DESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSG 185
Query: 183 ELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
K TRPY IEI++SQN+QISN+T+I+SP+WN+HPVY ++VIV+G+TILAP+ SPNTDG
Sbjct: 186 GFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDG 245
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
INPDSCTNT IEDCY+VSGDDC+AVKSGWDQ+GI GMPT+QL IRRLTCISP SA IAL
Sbjct: 246 INPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIAL 305
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
GSEMSGGI+DVR EDIT + ++S +RIKTAVGRGG+VKD++ RR TMKTMK+ FW++G+Y
Sbjct: 306 GSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAY 365
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
HP + +DP A+PVI NINYRDM A+NVT ARL+G DPFT IC+SN+ I+L +PK
Sbjct: 366 NQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPK 425
Query: 422 KLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
KL WNCT I+G+SS VTPKPC LLP E +C FP +++P+E++ + CS
Sbjct: 426 KLLWNCTSISGVSSKVTPKPCSLLP--EKGAPVDCAFPVDKIPIESVVLNKCS 476
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/473 (62%), Positives = 371/473 (78%), Gaps = 6/473 (1%)
Query: 3 SLKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVG 62
+LK + + I ++L + + + S+ N EY A++CR H+A L EFG VG
Sbjct: 9 TLKMIRTSFCILVVLAISSFSMMEARDLASKGKTN---IEYMALNCRKHTAVLTEFGAVG 65
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
DG TSNTKAFK AI L+ ++GG QL VPPGKWLTGSFNLTSHFTLF+ K A +LASQ
Sbjct: 66 DGKTSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQ 125
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG 182
DE E+PV+ PLPSYG+GRD G ++SLI GTNLTDVVITG+NGTI+GQG+ WW K+R+G
Sbjct: 126 DESEYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSG 185
Query: 183 ELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
K TRPY IEI++SQN+QISN+T+I+SP+WN+HPVY ++VIV+G+TILAP+ SPNTDG
Sbjct: 186 GFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDG 245
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
INPDSCTNT IEDCY+VSGDDC+AVKSGWDQ+GI GMPT+QL IRRLTCISP SA IAL
Sbjct: 246 INPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIAL 305
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
GSEMSGGI+DVR EDIT + ++S +RIKTAVGRGG+VKD++ RR TMKTMK+ FW++G+Y
Sbjct: 306 GSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAY 365
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
HP + +DP A+PVI NINYRDM A+NVT ARL+G DPFT IC+SN+ I+L +PK
Sbjct: 366 NQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPK 425
Query: 422 KLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
KL WNCT I+G+SS VTPKPC LLP E +C FP +++P+E++ + CS
Sbjct: 426 KLLWNCTSISGVSSKVTPKPCSLLP--EKGAPVDCAFPVDKIPIESVVLNKCS 476
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/460 (64%), Positives = 365/460 (79%), Gaps = 3/460 (0%)
Query: 16 ILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAA 75
IL+V I S + ++ EY A++CR H+A L EFG VGDG TSNTKAFK A
Sbjct: 8 ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEA 67
Query: 76 IDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS 135
I L+ ++GG QL VPPGKWLTGSFNLTSHFTLF+ K A +LASQDE E+PV+ PLPS
Sbjct: 68 ITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPS 127
Query: 136 YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-YTRPYLIEI 194
YG+GRD G ++SLI GTNLTDVVITG+NGTI+GQG+ WW K+R+G K TRPY IEI
Sbjct: 128 YGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEI 187
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
++SQN+QISN+T+I+SP+WN+HPVY ++VIV+G+TILAP+ SPNTDGINPDSCTNT IED
Sbjct: 188 IFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIED 247
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA 314
CY+VSGDDC+AVKSGWDQ+GI GMPT+QL IRRLTCISP SA IALGSEMSGGI+DVR
Sbjct: 248 CYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRI 307
Query: 315 EDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL 374
EDIT + ++S +RIKTAVGRGG+VKD++ RR TMKTMK+ FW++G+Y HP + +DP A+
Sbjct: 308 EDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAM 367
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS 434
PVI NINYRDM A+NVT ARL+G DPFT IC+SN+ I+L +PKKL WNCT I+G+S
Sbjct: 368 PVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVS 427
Query: 435 SGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
S VTPKPC LLP E +C FP +++P+E++ + CS
Sbjct: 428 SKVTPKPCSLLP--EKGAPVDCAFPVDKIPIESVVLNKCS 465
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/470 (63%), Positives = 367/470 (78%), Gaps = 3/470 (0%)
Query: 6 TAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGT 65
T K + IL+V I S + + EY A++CR H+A L EFG VGDG
Sbjct: 9 TLKMIRTSFCILVVLAISSFSMMEARDLGCKGKTNIEYMALNCRKHTAVLTEFGAVGDGK 68
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
TSNTKAFK AI L+ ++GG QL VPPGKWLTGSFNL+SHFTLF+ K A +LASQDE
Sbjct: 69 TSNTKAFKEAITKLAPKAADGGVQLIVPPGKWLTGSFNLSSHFTLFIQKGATILASQDES 128
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
E+PV+ PLPSYG+GRD G ++SLI GTNLTDVVITG+NGTI+GQG+ WW K+R+G K
Sbjct: 129 EYPVVAPLPSYGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFK 188
Query: 186 -YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
TRPY IEIM+SQN+QISN+T+I+SP+WN+HPVY ++VIV+G+TILAP+ SPNTDGINP
Sbjct: 189 NITRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINP 248
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
DSCTNT IEDCY+VSGDDC+AVKSGWDQ+GI GMPTKQL IRRLTCISP SA IALGSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSE 308
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGI+DVR EDIT + ++S +RIKTAVGRGG+VKD++ RR TMKTMK+ FW++G+Y H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
P + +DP A+P I NINYRDM A+NVT ARL+G DPFT IC+SN+ I+L +PKKL
Sbjct: 369 PASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLL 428
Query: 425 WNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
WNCT+I+G+SS VTPKPC LLP E +C FP +++P+E++ + CS
Sbjct: 429 WNCTNISGVSSKVTPKPCSLLP--EKGAPVDCAFPVDKIPIESVVLNKCS 476
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/444 (66%), Positives = 364/444 (81%), Gaps = 7/444 (1%)
Query: 35 ARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS--QLFV 92
AR S Y A +CRAH+AS+ +FGGVGDGTTSNT AF++A+DHLS++ EGG L+V
Sbjct: 61 ARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYV 120
Query: 93 PPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIF 152
P GKWLTG FNLTSHFTL+LH+DAV+L SQD EWP+++PLPSYGRGRD GGR++SLI
Sbjct: 121 PAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIG 180
Query: 153 GTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPS 212
G+NLTDVVITG NGTIDGQG +WW KF +LKYTR YLIE+M+S I ISNLTL+NSP+
Sbjct: 181 GSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPA 240
Query: 213 WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
WN+HPVYSS+++VQGITILAP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWD+
Sbjct: 241 WNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDE 300
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332
YGI+YGMP++ ++IRRLTC+SP SAVIALGSEMSGGIQDVRAEDITAI++ES VRIKTAV
Sbjct: 301 YGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAV 360
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-T 391
GRG +V+DV+ RRMT+ TMK FW+TG Y SHPD+ YDP+A+PV+ NI+Y+D+VA V
Sbjct: 361 GRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYK 420
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
AARL+GI G PF GIC++NVT +L+ K +K WNC DI G+S+ V+P PC+ L + A
Sbjct: 421 EAARLQGIQGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPL---QGA 476
Query: 452 QTTECNFPDNRLPVENMGVQMCSY 475
C FP + LP++ + VQ C+Y
Sbjct: 477 HDGACPFPTDTLPIDQVTVQQCAY 500
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 295/444 (66%), Positives = 364/444 (81%), Gaps = 7/444 (1%)
Query: 35 ARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS--QLFV 92
AR S Y A +CRAH+AS+ +FGGVGDGTTSNT AF++A+DHLS++ EGG L+V
Sbjct: 41 ARGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYV 100
Query: 93 PPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIF 152
P GKWLTG FNLTSHFTL+LH+DAV+L SQD EWP+++PLPSYGRGRD GGR++SLI
Sbjct: 101 PAGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIG 160
Query: 153 GTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPS 212
G+NLTDVVITG NGTIDGQG +WW KF +LKYTR YLIE+M+S I ISNLTL+NSP+
Sbjct: 161 GSNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPA 220
Query: 213 WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
WN+HPVYSS+++VQGITILAP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWD+
Sbjct: 221 WNIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDE 280
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332
YGI+YGMP++ ++IRRLTC+SP SAVIALGSEMSGGIQDVRAEDITAI++ES VRIKTAV
Sbjct: 281 YGISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAV 340
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-T 391
GRG +V+DV+ RRMT+ TMK FW+TG Y SHPD+ YDP+A+PV+ NI+Y+D+VA V
Sbjct: 341 GRGAYVRDVFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYK 400
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
AARL+GI G PF GIC++NVT +L+ K +K WNC DI G+S+ V+P PC+ L + A
Sbjct: 401 EAARLQGIQGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPL---QGA 456
Query: 452 QTTECNFPDNRLPVENMGVQMCSY 475
C FP + LP++ + VQ C+Y
Sbjct: 457 HDGACPFPTDTLPIDQVTVQQCAY 480
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/436 (66%), Positives = 361/436 (82%), Gaps = 7/436 (1%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS--QLFVPPGKWLTG 100
Y A +CRAH+AS+ +FGGVGDGTTSNT AF++A+DHLS++ EGG L+VP GKWLTG
Sbjct: 2 YLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVPAGKWLTG 61
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
FNLTSHFTL+LH+DAV+L SQD EWP+++PLPSYGRGRD GGR++SLI G+NLTDVV
Sbjct: 62 PFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGGSNLTDVV 121
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG NGTIDGQG +WW KF +LKYTR YLIE+M+S I ISNLTL+NSP+WN+HPVYS
Sbjct: 122 ITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYS 181
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S+++VQGITILAP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWD+YGI+YGMP
Sbjct: 182 SNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMP 241
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
++ ++IRRLTC+SP SAVIALGSEMSGGIQDVRAEDITAI++ES VRIKTAVGRG +V+D
Sbjct: 242 SQHIVIRRLTCVSPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRD 301
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGI 399
V+ RRMT+ TMK FW+TG Y SHPD+ YDP+A+PV+ NI+Y+D+VA V AARL+GI
Sbjct: 302 VFARRMTLTTMKRVFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGI 361
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFP 459
G PF GIC++NVT +L+ K +K WNC DI G+S+ V+P PC+ L + A C FP
Sbjct: 362 QGAPFRGICVANVTADLS-KSRKYPWNCADIEGVSANVSPAPCDPL---QGAHDGACPFP 417
Query: 460 DNRLPVENMGVQMCSY 475
+ LP++ + VQ C+Y
Sbjct: 418 TDTLPIDQVTVQQCAY 433
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 285/434 (65%), Positives = 355/434 (81%), Gaps = 6/434 (1%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y ++CR HSA + EFG GDG T NTKAFK A++ LSR +GG+QL VPPG+WLTGSF
Sbjct: 1 YRGLNCRKHSAFITEFGAKGDGKTLNTKAFKTAVNFLSRLTHDGGAQLVVPPGRWLTGSF 60
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+L SHFTL+LH+ AVLLASQDEKE+P++EPLPSYG+GRD GR++SLIFGTNLTDVVIT
Sbjct: 61 SLISHFTLYLHQGAVLLASQDEKEYPILEPLPSYGKGRDAPAGRFASLIFGTNLTDVVIT 120
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTIDGQGE WW+K+++ EL TRPY+IE+MYS +QISNLTL+NSP+WNVHPVY
Sbjct: 121 GANGTIDGQGESWWKKYKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRD 180
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
VI++G+TILAP SPNTDGI+PDSC+N RIE YIVSGDDC+A+KSGWD+YGI + MPT+
Sbjct: 181 VIIRGLTILAPTHSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQ 240
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
++IR LTCISP SA IALGSEMSGGIQ+VRAE ITAID+ESG+R+KT+ GRG FV+++Y
Sbjct: 241 DVVIRHLTCISPTSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIY 300
Query: 343 VRRMTMKTMKWAFWITGSYGS---HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
VR+MTMKTMK+ FW+TG Y S HPD +Y+P ALPVI+ INY DMVA NV+M LEGI
Sbjct: 301 VRKMTMKTMKYVFWMTGYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGI 360
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFP 459
D F GIC+SNVTI L KPK++ WNCT+I G++SGVTP+PC L + ++ C FP
Sbjct: 361 KEDVFKGICLSNVTIGLAKKPKEMLWNCTNIEGVASGVTPQPCGFLRE---SKAMGCPFP 417
Query: 460 DNRLPVENMGVQMC 473
++RLP+E + +++C
Sbjct: 418 EDRLPIEEVKLKVC 431
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/436 (67%), Positives = 352/436 (80%), Gaps = 7/436 (1%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
EY AI+CR HSA L +FG VGDG TSNTKAF AI LS++ +GG+QL VP GKWLTGS
Sbjct: 3 EYKAINCRKHSAVLTDFGAVGDGKTSNTKAFAEAIKKLSKYAPDGGAQLIVPAGKWLTGS 62
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE-GGRYSSLIFGTNLTDVV 160
FNLTSHFTLFLHKDAVLLASQDE EWP++ PLPSYG R+ GR LIF +N+TDV+
Sbjct: 63 FNLTSHFTLFLHKDAVLLASQDEDEWPLLTPLPSYGGVRENAVFGRPGGLIFASNVTDVI 122
Query: 161 ITGDNGTIDGQGELWWRKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
ITG+NGT+DGQG +WW KF +LK RPYLIEIMYS +QISN+TLINSP W+VHP+Y
Sbjct: 123 ITGNNGTVDGQGAVWWEKFNEKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIY 182
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
SS++ +QG+TILAPV PNTDGINPDSCTN IEDCYIVSGDDC+AVKSG DQYGI GM
Sbjct: 183 SSNLWIQGVTILAPVDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGM 242
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P KQL+IRR+TCISP SA IALGSEMSGGI+DVR EDITAI++ES VR+KTAVGRGG+VK
Sbjct: 243 PMKQLVIRRITCISPKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVK 302
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
D++VRRMT+KTMK+ FW+ GSY SH D YDP ALP I NIN+RD+ A+NVT+ +LEG+
Sbjct: 303 DIFVRRMTLKTMKYVFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGL 362
Query: 400 A-GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
G+PFTGICISNVT+ L K K+ WNCTD++G+SS VTP PC L P ++ +C F
Sbjct: 363 GEGNPFTGICISNVTMTLAEKHKEPAWNCTDVSGVSSNVTPMPCAAL----PKKSMDCPF 418
Query: 459 PDNRLPVENMGVQMCS 474
P+++LP+E + +Q CS
Sbjct: 419 PEDKLPIEKVRLQTCS 434
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 301/478 (62%), Positives = 376/478 (78%), Gaps = 18/478 (3%)
Query: 6 TAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGT 65
T VIC+I +V I SL ++ Y AI+CR HSA L +FGGVGDG
Sbjct: 14 TLIEINVICVISIVLIFGSLAECNLD-----------YLAINCRKHSAVLTDFGGVGDGK 62
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
TSNTKAF AI LS++ ++GG+QL VPPGKWLTGSFNLTSHFTLFL K AV+L SQDE
Sbjct: 63 TSNTKAFNTAITKLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKGAVILGSQDES 122
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
+WP + PLPSYGRGRD G R+SSLIFGT+LTDV+ITG+NGTIDGQG WW KF +LK
Sbjct: 123 QWPQLPPLPSYGRGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLK 182
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
TRPY+IEI+YS IQISNLTLINSPSW VHP YSS++I++G+TILAPV SPNTDGI+PD
Sbjct: 183 ITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPD 242
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
S TN RIED YIVSGDDC+A+KSGWDQYGI +G P+KQ+IIRRLTCISP SA+IALGSEM
Sbjct: 243 SSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEM 302
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT-MKWAFWITGSYGSH 364
SGGI++VR ED+TAI++ES VRIK+AVGRGG+VKD++V+ + + T +++ FW+TGSYG H
Sbjct: 303 SGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDH 362
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PDN +DP ALP I I +RD++A+NVT+A +LEGI+ DPFTGICISNVTIEL+ KK +
Sbjct: 363 PDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKK 422
Query: 425 --WNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANYL 480
WNCTD++G++S V PKPC+LL + + EC FP ++L +E++ + C+ K++
Sbjct: 423 LPWNCTDVSGVTSNVVPKPCDLLSEKK----IECPFPTDKLAIEDVQFKTCNIKSSVF 476
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 287/349 (82%), Positives = 320/349 (91%)
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
E+P+IEPLPSYGRGRD +G R+SSLIFG NLTDVVITG NGTIDGQGELWW KFRAGEL
Sbjct: 3 EYPLIEPLPSYGRGRDADGARFSSLIFGNNLTDVVITGANGTIDGQGELWWTKFRAGELN 62
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
+TRPYLIEIM+S NIQISNLTLINSPSWNVHPVY S+V+VQG+TILAPV SPNTDGINPD
Sbjct: 63 HTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPNTDGINPD 122
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
SCTNT+I+DCYIVSGDDCVAVKSGWD+YGIA+GMPTKQ++IRRLTCISP SAVIALGSEM
Sbjct: 123 SCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAVIALGSEM 182
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGGI+DVRAEDITAIDSESGVRIKTAVGRGG+VKD+YVR MT+KTMKW FW+TG+YGSHP
Sbjct: 183 SGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMTGNYGSHP 242
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
DNNYDP+A+PVIQNINYRD+VAENVTMAARLEGIAGDPFTGICISNVTI L KKLQW
Sbjct: 243 DNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLARNRKKLQW 302
Query: 426 NCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
NC+D+ GI+S VTPKPC+LL D P + CN+P++ LP+ENM VQ CS
Sbjct: 303 NCSDVAGITSEVTPKPCDLLSDQGPGKIGACNYPEDNLPIENMEVQTCS 351
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/473 (59%), Positives = 372/473 (78%), Gaps = 6/473 (1%)
Query: 8 KRTQVICIILLVGIIISLNTNGVESRKARNS-DWFEYSAISCRAHSASLEEFGGVGDGTT 66
++ Q++C + +V +++ + + Y A +CR H+ASL EFGGVGDGTT
Sbjct: 27 EQQQILCSLFVVFLVLGAPAAAARRHAPAAAGEQSAYLAPACREHTASLAEFGGVGDGTT 86
Query: 67 SNTKAFKAAIDHLSRFQSEGGS--QLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
SNT AF+AA++HLS++ +GG L+VP G+WLT FNLTSHFTLFLH DAV+LASQ+
Sbjct: 87 SNTAAFRAAVEHLSQYSGDGGGGGMLYVPAGRWLTAPFNLTSHFTLFLHSDAVILASQNI 146
Query: 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGEL 184
EWPVI PLPSYGRGRD GGRY+SLI G+NLTDVVITG+NGTIDGQG WW K+++G+L
Sbjct: 147 SEWPVIAPLPSYGRGRDHAGGRYTSLISGSNLTDVVITGNNGTIDGQGATWWSKYKSGKL 206
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
KYTR YLIE+M S I ISN+TL+NSP+WN+HPVYS ++++QG+TILAP SPNTDGINP
Sbjct: 207 KYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNIVIQGVTILAPTRSPNTDGINP 266
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
DSC+ RIEDCY+VSGDDCVA+KSGWD+YGIA G+PT+ +I+RRLTC+SP SA++A+GSE
Sbjct: 267 DSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSALVAIGSE 326
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGG++DVR ED+ A+D+ES VRIKTAVGRG +VKD+Y RRMT+ MK FW+TG Y SH
Sbjct: 327 MSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMTGDYKSH 386
Query: 365 PDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
PD+ YD A+PV++ ++++D+ A V AAR+EGI+G PF GIC++NVT+E+T KP+K+
Sbjct: 387 PDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTMEMT-KPRKV 445
Query: 424 QWNCTDITGISSGVTPKPC-ELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
WNC D+ G+S+GVTP PC +L + A ++C FP ++L V+ + VQ C+Y
Sbjct: 446 MWNCADVEGVSTGVTPAPCGQLQQKQDGAGGSDCPFPTDKLAVDEVTVQQCTY 498
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/450 (63%), Positives = 354/450 (78%), Gaps = 2/450 (0%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
VE +K S F Y A SCRA S S+ EFGGVGDGTT NT+AF+ AI+HLS F GG Q
Sbjct: 25 VECQKGSWS--FSYVAPSCRAQSVSIAEFGGVGDGTTVNTEAFRKAIEHLSEFSETGGGQ 82
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
L++PPG+WLTGSFNLT HFTL+LHK+AV+L SQD ++WP+I PLPSYG GRD G RYSS
Sbjct: 83 LYIPPGRWLTGSFNLTDHFTLYLHKEAVILGSQDLEDWPLIPPLPSYGMGRDAPGPRYSS 142
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LI G NLTDVVITGDNGTIDGQG +WW+KF LK TR YL+E+MYS++I ISNLT +N
Sbjct: 143 LINGYNLTDVVITGDNGTIDGQGAIWWQKFHKKILKNTRGYLVELMYSKDIIISNLTFLN 202
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP+WN+HPVYSS++++Q +TILAP+ SPNTDGI+PDSC+ RIEDCY+VSGDD VA+KSG
Sbjct: 203 SPAWNLHPVYSSNILIQYVTILAPLDSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSG 262
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++GMP++ ++IRRL ISP SA+IALGSEMSGGIQDVRAEDI AI+SE+G+RIK
Sbjct: 263 WDEYGISFGMPSQHIVIRRLVGISPTSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIK 322
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
T+ GRGGFVKD++V RMTM MKWAF +TGSYGSHPDN YDP+ALP ++ I+Y ++VA N
Sbjct: 323 TSPGRGGFVKDIFVNRMTMVNMKWAFTMTGSYGSHPDNKYDPNALPAVERISYSNIVATN 382
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
V++A +L+GIA PF IC++NVTI + K KK WNCT I G+S+ V P+PC LL +
Sbjct: 383 VSVAGKLDGIANAPFKDICLTNVTITMAAKSKKYPWNCTYIHGLSNAVYPQPCSLLEERP 442
Query: 450 PAQTTECNFPDNRLPVENMGVQMCSYKANY 479
C P E +Q CSY +++
Sbjct: 443 AEGDAFCPSPQELDTTEENSLQHCSYSSSH 472
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/468 (61%), Positives = 364/468 (77%), Gaps = 12/468 (2%)
Query: 16 ILLVGIIISLNTNGVESRK-----ARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
IL +++ L T V +R+ A + Y A +CR H+ASL +FGGVGDG TSNT
Sbjct: 6 ILCFAVLLLLATTAVSARRHAPPQAGPAGQSTYMAPNCREHTASLTDFGGVGDGNTSNTA 65
Query: 71 AFKAAIDHLSRFQSEGGS--QLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
AF+ A++HLS++ EGG L+VP G+WLT FNLTSHFTLFLH DAV+L +QD +WP
Sbjct: 66 AFRKAVEHLSQYSGEGGGGGMLYVPAGRWLTAPFNLTSHFTLFLHADAVILGTQDVAQWP 125
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTR 188
VI+PLPSYGRGRD GGRY+SL+ G+NLTDVVITG+NGTIDGQG WW K+++G+LKYTR
Sbjct: 126 VIDPLPSYGRGRDHAGGRYASLVSGSNLTDVVITGNNGTIDGQGATWWSKYKSGKLKYTR 185
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
YLIE+M++ + ISN+TL+NSP+WN+HPVYS +++V G+TILAPV SPNTDGINPDSC+
Sbjct: 186 GYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPNTDGINPDSCS 245
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
RIEDCY+VSGDDCVA+KSGWD+YGIA GMP++ + +RRLTC+SP SAVIALGSEMSGG
Sbjct: 246 QVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAVIALGSEMSGG 305
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN 368
I+DVRAEDITAI +ES VRIKTAVGRG +V+DVY RRM + MK FW+TG Y SHPD+
Sbjct: 306 IRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMTGDYKSHPDDG 365
Query: 369 YDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
YD A+PV++NI+Y+D+VA V AAR++GI G PF GIC++NVT+E+T K +K+ WNC
Sbjct: 366 YDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTMEMT-KERKVSWNC 424
Query: 428 TDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
D+ G+S+GVTP PC L + C FP + L V+ + VQ CSY
Sbjct: 425 ADVEGVSAGVTPAPCAPL---QGTHGGACPFPTDTLAVDQITVQQCSY 469
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/429 (62%), Positives = 334/429 (77%), Gaps = 5/429 (1%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGG-SQLFVPPGKWLTGSFNLTS 106
CR H + E+G VGDG T NT AF A+ LSR ++GG + L VP GKWLTG FNLTS
Sbjct: 38 CRKHVKRITEYGAVGDGKTLNTAAFARAVADLSRRAADGGGAALVVPEGKWLTGPFNLTS 97
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
HFTLFLH+ A +LASQD +WP+I PLPSYGRGRD G RYS+ I G+NLTDV+ITG NG
Sbjct: 98 HFTLFLHRGAEILASQDLNDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIITGQNG 157
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TI+GQG++WW K+ A EL YTR YL+E++YS +I ISN+T +++PSWN+HP Y ++V +
Sbjct: 158 TINGQGQVWWDKYHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTIS 217
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
G+TILAPV SPNTDGI+PDS + +IEDCYIVSGDDC+AVKSGWD+YGI + MP++ +++
Sbjct: 218 GVTILAPVHSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVV 277
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
RRLTCISP SA+IALGSEMSGGIQDVRAED AI++ES VRIK+ VGRGGFVKDV+VR +
Sbjct: 278 RRLTCISPTSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGL 337
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
++ TMKW FW+TG+YG HPDN+ +P ALP + INYRD+ AENVTMA R+EGI DP+TG
Sbjct: 338 SLHTMKWVFWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTG 397
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVE 466
IC+SNVT +L KKLQWNCTD+ G++SGV+PKPC L A C FP+ L +
Sbjct: 398 ICMSNVTAQLAPDAKKLQWNCTDVKGVASGVSPKPCPEL----GAVGKPCTFPEEELVIG 453
Query: 467 NMGVQMCSY 475
+ C+Y
Sbjct: 454 PPELPKCTY 462
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/471 (59%), Positives = 348/471 (73%), Gaps = 16/471 (3%)
Query: 7 AKRT--QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDG 64
AK+T QV+C + LV +L GV + + + CR H A + E+GGVGDG
Sbjct: 2 AKKTILQVVCAVALV----ALCACGVAASPSSPA------GAGCRKHVARITEYGGVGDG 51
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
SNT AF A+ LS +GG+ L VP GKWLTG FNLTSHFTLFL A +LASQ+
Sbjct: 52 RRSNTAAFAKAVADLSLRAGDGGAALVVPKGKWLTGPFNLTSHFTLFLDHGAEILASQNL 111
Query: 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGEL 184
++WP+I PLPSYGRGRD G RYS+ I G+NLTDV+ITG NGTI+GQG++WW KF A EL
Sbjct: 112 EDWPLIAPLPSYGRGRDEPGPRYSNFIAGSNLTDVIITGRNGTINGQGQVWWDKFHAKEL 171
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
YTR YL+E++YS NI ISN+T ++SPSWN+HP Y ++V + GITILAP+ SPNTDGI+P
Sbjct: 172 TYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPNTDGIDP 231
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
DS ++ +IED YIVSGDDC+AVKSGWDQYGI + MP++ ++IRRLTCISP SA+IALGSE
Sbjct: 232 DSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAMIALGSE 291
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGI+DVRA D AID+ES VRIK+ VGRGG+VKDV+VR +++ TMKW FW+TG+YG H
Sbjct: 292 MSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMTGNYGQH 351
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PDN+ DP+ALP + INY D+ AENVTMA R+EGI DP+TGIC+SNVT +L KKLQ
Sbjct: 352 PDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAPDAKKLQ 411
Query: 425 WNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSY 475
WNCTD+ G++S V+P PC L A C FP+ L + + CSY
Sbjct: 412 WNCTDVKGVASDVSPVPCPEL----GAAGKPCAFPEEELVIGPPELPTCSY 458
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 332/433 (76%), Gaps = 4/433 (0%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y+ CR H A + E+G VGDG T NT AF A+ L+R +GG+ L VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTL+L + A +LASQD K WP+I PLPSYGRGRD G RYS+ I G+NLTDV+IT
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTI+GQG++WW KF A ELK+TR +L+E++YS NI ISN+T +++P WN+HP Y ++
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTN 214
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V + G+TILAPV SPNTDGI+PDS + +IEDCYIVSGDDCVAVKSGWD+YGI + MP++
Sbjct: 215 VTISGVTILAPVNSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQ 274
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
++IRRLTC+SP SA+IALGSEMSGGI+DVRAED AI++ES VR+K+ GRGGFV+D++
Sbjct: 275 HIVIRRLTCVSPTSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIF 334
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
VR +++ TMKW FW+TG+YG HPDN DP+A+P + INY D+ AENVTMA R+EGI D
Sbjct: 335 VRGLSLHTMKWVFWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKD 394
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNR 462
P+TGICISNVT L K+LQWNCT++ G++S V+PKPC L A+ C FP+
Sbjct: 395 PYTGICISNVTARLAPDAKELQWNCTNVKGVTSHVSPKPCPEL----AAEGKPCAFPEEE 450
Query: 463 LPVENMGVQMCSY 475
L + + CSY
Sbjct: 451 LVIGPPELPKCSY 463
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/445 (62%), Positives = 345/445 (77%), Gaps = 11/445 (2%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E + AR EY AI+CR HSA + EFG GDG TSNTKAFK+AIDHLS+F GG+ L
Sbjct: 20 ECQTARTMASVEYPAINCRNHSAVVMEFGAAGDGKTSNTKAFKSAIDHLSKFADVGGAHL 79
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
VPPGKWLTGSFNLTSHFTL++HKDA++L SQDE ++P+++ LPSYG GR+SSL
Sbjct: 80 IVPPGKWLTGSFNLTSHFTLYIHKDAIILGSQDESDYPIVKALPSYG----GTAGRFSSL 135
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
I GTNLTDVVITG NGT +GQG+ WW KF L TRP LIEI++S +QI+ TLI+S
Sbjct: 136 ILGTNLTDVVITGGNGTTNGQGKPWWDKFHEKRLNATRPNLIEIVFSYQVQITX-TLIDS 194
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSWNVHP+YS +VI+QG+TI+APVT PNTDGINPDSCTN R+EDCYIVSGDD +AVKS
Sbjct: 195 PSWNVHPIYSRNVIIQGLTIIAPVTVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSAL 254
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
++ G+ GMPT+ LIIRRLTCISP SAVIALG EM+G + +VRAEDITAID + G+RIKT
Sbjct: 255 NENGVKCGMPTEGLIIRRLTCISPHSAVIALGREMAGXM-NVRAEDITAIDXQFGIRIKT 313
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV 390
+ RGG+VKD+YVRRMTMKTM++AFWI G YG P H PVI+ INYRDMVA+NV
Sbjct: 314 GLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPG---HEGPVIEGINYRDMVADNV 370
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEP 450
T A+L GI+G PFTG CISNVTI LT + +K QW+C ++ GI+S VTP+PC+LL +
Sbjct: 371 TYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLSPSK- 429
Query: 451 AQTTECNFPDNRLPVENMGVQMCSY 475
+ C FP + LP+E++ +++CSY
Sbjct: 430 -EILNCPFPKDLLPIEDVKLRICSY 453
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/427 (59%), Positives = 323/427 (75%), Gaps = 4/427 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R H A + E+G VGDG T NT AF A+ LS +GG+ L VPPGKWLTG FNLTS F
Sbjct: 41 RKHVAKVTEYGAVGDGRTLNTGAFAKAVADLSHRARDGGAALVVPPGKWLTGPFNLTSCF 100
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L + A +LASQD WP+I PLPSYGRGRD G RY + I G+NLTDV+ITG NGTI
Sbjct: 101 TLYLDEGAEILASQDMNHWPLIAPLPSYGRGRDEPGPRYINFIGGSNLTDVIITGKNGTI 160
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+GQG++WW KF A ELK TR +L+E+++S NI ISN+T +++P WN+HP Y ++V + G+
Sbjct: 161 NGQGQVWWDKFHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGV 220
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS T+ +IEDCYIVSGDDCVAVKSGWD+YGI + MP++ ++IRR
Sbjct: 221 TILAPLNSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRR 280
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
LTCISP SA+IALGSEMSGGI+DVRAED AI++ES VRIK+ GRGGFVKD++VR +++
Sbjct: 281 LTCISPTSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSL 340
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
TMKW FW+TG+YG HPDN +P+A+P + INY D+ AENVT A R+EGI DP+TGIC
Sbjct: 341 HTMKWVFWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGIC 400
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENM 468
ISNVT L +LQWNCT++ G++S V+PKPC L A+ C FP L +
Sbjct: 401 ISNVTASLAPNATELQWNCTNVKGVTSNVSPKPCPEL----GAEGKPCAFPVEELVIGPP 456
Query: 469 GVQMCSY 475
+ CSY
Sbjct: 457 ALPKCSY 463
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/461 (58%), Positives = 328/461 (71%), Gaps = 58/461 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNS--DWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKA 74
LLV + I L +ESR RNS E+SA++CR HSA L +FG VGDG TSNTKAF+
Sbjct: 8 LLVFLAIFLFP-AIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRN 66
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AI LS+ ++GG+QL VPPGKWLTGSFNLTSHFTLF+ + A +LASQDE EWPVI PLP
Sbjct: 67 AISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLP 126
Query: 135 SYGRGRDTEG-GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIE 193
SYG+GRD G GR++SLI GTNLTDVVITG+NGTI+GQG+ WW KF+ + K TRPYLIE
Sbjct: 127 SYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIE 186
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
I++S+NIQISN+TLI+SPSWN+HPVY +SVIV+ +T+LAPVT PNTDGINPDSCTNT IE
Sbjct: 187 ILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIE 246
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYIVSGDDC+AVKSGWDQYGI A+G ++D+
Sbjct: 247 DCYIVSGDDCIAVKSGWDQYGIK----------------------TAVGR--GAYVKDIY 282
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
A IT MKTMK+ FW++G+YGSHPD +DP A
Sbjct: 283 ARRIT-----------------------------MKTMKYVFWMSGNYGSHPDEGFDPKA 313
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
LP I NINYRDM AENVTM+A L+GI DPFTGICISNVTI L K KK+QWNCTD+ G+
Sbjct: 314 LPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGV 373
Query: 434 SSGVTPKPCELLPDHEP-AQTTECNFPDNRLPVENMGVQMC 473
+S VTP+PC LLP+ + A+ +C FP + +P+E++ ++ C
Sbjct: 374 TSRVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 414
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/471 (53%), Positives = 331/471 (70%), Gaps = 43/471 (9%)
Query: 11 QVICIILLVGIIISLNTNGVESRKAR--NSDWFE---YSAISCRAHSASLEEFGGVGDGT 65
++ ++ VG S++ ESR + N D + Y+AI+CR H+A L +FGGVGDG
Sbjct: 14 EIFTALVFVG---SISVGIAESRNVQIFNKDSYNAVNYAAINCRKHTAFLTDFGGVGDGK 70
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
T NTKAF+AAI +LS++ +GG++L VP GKWLTGSFNLTSHFTLFLH+ A +LASQ+E
Sbjct: 71 TLNTKAFQAAIANLSQYADDGGAELIVPAGKWLTGSFNLTSHFTLFLHRGATILASQNEA 130
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
++P+I LPS+G +D GR+SSLI G NLTDVVITG+NGTIDGQG WW KF G K
Sbjct: 131 DFPIIAALPSFGVEKDFPDGRFSSLIRGINLTDVVITGNNGTIDGQGAPWWDKFEKGLFK 190
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
+RP LI+IMY+ +QISN+TL+NSPSW+VHPVY S+V+VQG+TI+APV PNTDGINP
Sbjct: 191 ASRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEVPNTDGINPS 250
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
+ S + QY IS A IALGSEM
Sbjct: 251 RF------------------LASSFHQY-------------LNFPLISTSDAGIALGSEM 279
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGGI++VR EDITA S+S VRIKTA GRGG+VKD++VRRMT++TMK+ FWI+G+Y +HP
Sbjct: 280 SGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNYKTHP 339
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
D+ +DP+AL I+NINYRD+VA NV M+ +G + FTGIC+SNVTI+L+ PKK QW
Sbjct: 340 DDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPKKPQW 399
Query: 426 NCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYK 476
NC+++ G+SS VTP PC L P+ + +C FP+++LP+E++ ++ C+ K
Sbjct: 400 NCSNVEGVSSHVTPTPCSLFPE----KPVDCTFPEDKLPIESIHLKTCTAK 446
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/371 (60%), Positives = 294/371 (79%), Gaps = 9/371 (2%)
Query: 110 LFLH--KDAVLLASQ---DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
L+LH +D L ++ D ++WP+I PLPSYGRGRD G RYS+ I G+NLTDV+I+G+
Sbjct: 12 LWLHSPRDLTSLTNRPVLDLEDWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIISGN 71
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NGTI+GQG++WW KF A EL YTR YL+E++YS++I ISN+T +++PSWN+HP Y ++V
Sbjct: 72 NGTINGQGQVWWDKFHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVT 131
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
+ G+TILAPV SPNTDGI+PDS ++ +IEDCYIVSGDDC+AVKSGWD+YGI + MP++ +
Sbjct: 132 ISGVTILAPVHSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHI 191
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
++RRLTCISP SA+IALGSEMSGGIQDVR ED AI++ES VRIK+ VGRGGFV+DV+VR
Sbjct: 192 VVRRLTCISPTSAMIALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVR 251
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
R+++ TMKW FW+TG+YG HPDN+ DP ALP + INYRD+ AENVTMA R+EGI DP+
Sbjct: 252 RLSLHTMKWVFWMTGNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPY 311
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLP 464
TGIC+SNVT +L K KKLQWNCTD+ G++ GV+P+PC L A+ C FPD L
Sbjct: 312 TGICMSNVTAQLAPKAKKLQWNCTDVQGVAYGVSPEPCPEL----GAEGKPCTFPDEELV 367
Query: 465 VENMGVQMCSY 475
+ + C+Y
Sbjct: 368 IGPPELPKCTY 378
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/439 (53%), Positives = 306/439 (69%), Gaps = 12/439 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
S W +S+ C R HS S+ EFG VGDG T NTKAF+ AI +L+ F +GG++
Sbjct: 20 SSWKVWSSTLCKETNLDKVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFSDKGGAK 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSF+L SH TL+L KDA++L S + ++WPV++PLPSYGRGR+ GGR+ S
Sbjct: 80 LFVPAGRWLTGSFDLISHLTLWLDKDAIILGSTNSEDWPVVDPLPSYGRGRELPGGRHRS 139
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LI+G NLTDV+ITG+ G IDGQG +WW FR L YTRP+L+E+M S + ISNLT +N
Sbjct: 140 LIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNSTRVLISNLTFLN 199
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP W +HPVY S V VQ +TILAP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSG
Sbjct: 200 SPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSG 259
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGIA+G P+ ++I RL + SA IA+GSEMSGG+ DVRAEDI DS + +RIK
Sbjct: 260 WDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIK 319
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
T+ GRGG+V+++YV MT+ + A TGSYG HPD+ YDP+ALPVI+ I D++ EN
Sbjct: 320 TSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNALPVIEKITIEDVIGEN 379
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH- 448
+T A +EGI GD F IC+SN+T+ N WNC++I G S V P+ CE L +
Sbjct: 380 ITKAGLIEGIEGDNFVNICLSNITL---NVSSNYPWNCSNIRGYSDMVFPEACEPLKERI 436
Query: 449 EPAQTTECNFPDNRLPVEN 467
P ++C + N N
Sbjct: 437 FPDHCSDCYYLSNHRQSSN 455
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/437 (55%), Positives = 306/437 (70%), Gaps = 15/437 (3%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+ W SA+ C R HS S+ EFG V DG T NTKAFK AI +LS F +GG++
Sbjct: 50 TQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAE 109
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSFNL SH T+ L DAV++ SQD +WPVI+PLPSYGRGR+ G R+ S
Sbjct: 110 LFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQS 169
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFG+NLTDV+ITG NGTIDGQGELWW F L YTRP L+E+MYS + ISNLT +N
Sbjct: 170 LIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMN 229
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
+P WN+HPVY S V+VQ +TILAP++SPNTDGI+PDS +N IEDCYI +GDD V +KSG
Sbjct: 230 APFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSG 289
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++ P+ + IR +T + SA IA GSEMSGGI DVRAE + I+S G+RIK
Sbjct: 290 WDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIK 349
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+VK++Y+ ++M + A ITG+YG HPD+NYD +ALPVI NI +++V N
Sbjct: 350 TAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVN 409
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL-PDH 448
+ A L GI GD F+ IC+SNV+ L++K WNC+ I G S+ V P+ CE L P
Sbjct: 410 IGTAGMLLGIQGDIFSNICLSNVS--LSSKSAD-PWNCSLIEGFSNSVAPEICEQLRPSP 466
Query: 449 EPAQTTECNFPDNRLPV 465
P Q + N PV
Sbjct: 467 GPGQVC---YDGNSYPV 480
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/421 (54%), Positives = 303/421 (71%), Gaps = 7/421 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NTKAF+ AI +L+ F +GG++LFVP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L KDAV+L S + ++WPV++PLPSYGRGR+ GGR+ SLI+G NLTDV+ITG+NGTI
Sbjct: 99 TLWLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW +F L YTRP+L+E+M S + ISNLT +NSP W +HPVY S V VQ +
Sbjct: 159 DGQGSIWWNRFMNRTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
ILAP SPNTDGI+PDS N IEDCYI +GDD +A+KSGWD+YGIAYG P+ +II R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + S IA+GSEMSGG+ +V AEDI DS +G+RIKT+ GRGG+V+++YV +++
Sbjct: 279 LVGKTQTSG-IAIGSEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSL 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A W TGSYG HPD+ YDP+ALPVI+ + +D+V EN+ A +EGI GD F IC
Sbjct: 338 ANVDIAIWFTGSYGEHPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 409 ISNVTIELT-NKPKKLQWNCTDITGISSGVTPKPCELLPDH-EPAQTTECNFPDNRLPVE 466
+SN+ + +T N P WNC+ + G S V P+ CE L + P ++C + N++
Sbjct: 398 LSNIILNVTSNYP----WNCSYVKGYSDLVQPEACEPLKERIFPDHCSDCYYLTNQIQSS 453
Query: 467 N 467
N
Sbjct: 454 N 454
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/437 (54%), Positives = 305/437 (69%), Gaps = 15/437 (3%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+ W SA+ C R HS S+ EFG V DG T NTKAFK AI +LS F +GG++
Sbjct: 50 TQWATSSAMYCNDLTASVHRPHSVSITEFGAVNDGVTLNTKAFKNAIFYLSSFADKGGAE 109
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSFNL SH T+ L DAV++ SQD +WPVI+PLPSYGRGR+ G R+ S
Sbjct: 110 LFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELPGKRHQS 169
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFG+NLTDV+ITG NGTIDGQGELWW F L YTRP L+E+MYS + ISNLT +N
Sbjct: 170 LIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVISNLTFMN 229
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
+P WN+HPVY S V+VQ +TILAP++SPNTDGI+PDS +N IEDCYI +GDD V +KSG
Sbjct: 230 APFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSG 289
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++ P+ + IR +T + SA IA GSEMSGGI DVRAE + I+S G+RIK
Sbjct: 290 WDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIK 349
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+VK++Y+ ++M + A ITG+YG HPD+NYD + LPVI NI +++V N
Sbjct: 350 TAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNVLPVISNITIKNVVGVN 409
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE-LLPDH 448
+ A L GI GD F+ IC+SNV+ L++K WNC+ + G S+ V P+ CE L P
Sbjct: 410 IGTAGMLLGIQGDIFSNICLSNVS--LSSKSAD-PWNCSLVKGFSNSVAPEICEQLRPSP 466
Query: 449 EPAQTTECNFPDNRLPV 465
P Q + N PV
Sbjct: 467 GPGQVC---YDGNSYPV 480
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/414 (55%), Positives = 296/414 (71%), Gaps = 11/414 (2%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W S + C R HS S+ EFG VGDG T NTKAF+ AI +LS F ++GG+QLF
Sbjct: 23 WSSVSGMYCKDLTASVYRPHSVSITEFGAVGDGMTRNTKAFQNAIFYLSSFANKGGAQLF 82
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+WLTGSF+L SH T+ L KDAV+L S D +WPVI+PLPSYGRGR+ G R+ SLI
Sbjct: 83 VPAGRWLTGSFSLVSHLTVSLDKDAVILGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLI 142
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
FG+NLTDV+ITG NGTIDGQGE+WW F L YTRP L+E MYS + +SNLT NSP
Sbjct: 143 FGSNLTDVIITGANGTIDGQGEIWWNWFHNHTLNYTRPPLVEFMYSTRVVVSNLTFTNSP 202
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+HPVY S V+VQ +TILAP++SPNTDGI+PDS TN IEDCYI +GDD V +KSGWD
Sbjct: 203 FWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWD 262
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+YGI++ P+ + I+ +T + SA IALGSEMSGGI +VRA I ++S G+RIKTA
Sbjct: 263 EYGISFAYPSSNISIQNITGQTRSSAGIALGSEMSGGISNVRAVGIRIVNSVHGIRIKTA 322
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+VK+VY+ ++M + A IT +YG HPD+ YD +ALP+I NI ++++ N+
Sbjct: 323 PGRGGYVKNVYIADVSMDNVSIAIRITANYGEHPDDKYDKNALPIISNITIKNVIGANIG 382
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+A L+GI GD F+ IC+SNVT+ + WNC+ + G S+ V+P+ CE L
Sbjct: 383 VAGMLQGIQGDSFSNICLSNVTLSTKSMDP---WNCSLVEGYSNSVSPEICEEL 433
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/409 (54%), Positives = 297/409 (72%), Gaps = 4/409 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLFVP G+WLTGSF+L SH
Sbjct: 39 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFDLISHL 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L KDAV+L S + +WPVI+PLPSYGRGR+ G R+ SLI+G NLTDV++TGDNGTI
Sbjct: 99 TLWLDKDAVILGSMNSNDWPVIDPLPSYGRGRELPGRRHRSLIYGCNLTDVIVTGDNGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F+ L YTRP+L+E + S + ISN+T +NSP W +HPVY S VI+Q +
Sbjct: 159 DGQGSIWWNWFQKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWD+YGI+Y P+ +IIRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + SA IA+GSEMSGG+ +V AE + +S++G+RIKT+ GRGG+V+++Y+ M +
Sbjct: 279 LVGKTNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNL 338
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+K A TG YG HPD YDP ALP+I+NI +D++ EN+ A LEGI GD F IC
Sbjct: 339 VDVKIAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNIC 398
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH-EPAQTTEC 456
+SN+T+ +T++ WNC+ I G S V+P+ CE L + P +C
Sbjct: 399 LSNITLNVTSESP---WNCSYIHGYSDLVSPEACEPLGERIYPGHVLDC 444
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/443 (52%), Positives = 307/443 (69%), Gaps = 5/443 (1%)
Query: 3 SLKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVG 62
S K + V+ ++L+ I+ T + + +A R H AS+ +FG VG
Sbjct: 5 SRKMGRSASVLQVLLVSATIVVAQTQWASGVWGMYCE--DLTASVERPHRASVTDFGAVG 62
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
DG T NTKAF+ A+ HL F +GG+QLFVP G+WLTGSF+L SH TL L KDAV+L S
Sbjct: 63 DGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILGSP 122
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG 182
D +WPVI+ LPSYGRGR+ G R+ SLIFG+NLTDV+ITG NGT+DGQG +WW F
Sbjct: 123 DSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFHNH 182
Query: 183 ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
L YTRP L+E+MYS + ISNLT INSP WN+HPVY S V+VQ +TILAP++SPNTDGI
Sbjct: 183 TLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTDGI 242
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+PDS TN IEDCY+ +GDD + +KSGWD+YGI++ P+ + IR +T + SA +A G
Sbjct: 243 DPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLAFG 302
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SEMSGGI DVRAE + ++S G+RIKTA GRGG+VK+VYV ++ + A ITG+YG
Sbjct: 303 SEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGNYG 362
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
HPD+ YD +ALP I NI +D+V N+ +A L+GI GD F+GIC+SNV++ + +
Sbjct: 363 EHPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTDP- 421
Query: 423 LQWNCTDITGISSGVTPKPCELL 445
WNC+ + G SS V+P+ CE L
Sbjct: 422 --WNCSLVEGYSSSVSPEVCEQL 442
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/435 (52%), Positives = 301/435 (69%), Gaps = 13/435 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
S W +S+ C R HS S+ EFG VGDG T NTKAF+ AI +L+ F +GG++
Sbjct: 28 STWTVWSSSCCNQINLNEVRPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSFADKGGAK 87
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSF+L SH TL+L DAV+L S + +WPV++PLPSYGRGR+ GGR+ S
Sbjct: 88 LFVPAGRWLTGSFDLISHLTLWLDNDAVILGSTNSDDWPVVDPLPSYGRGRELPGGRHRS 147
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LI+G NLTDVVITG+NGTIDGQG +WW F L YTRP+L+E+M S + ISN+T +N
Sbjct: 148 LIYGCNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFLN 207
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP W +HPVY S V +Q +TI+AP++SPNTDGINPDS N IEDCYI +GDD +++KSG
Sbjct: 208 SPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSG 267
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD YGI++G P+ + IRRL + SA IA+GSEMSGG+ +V AEDI DS S +RIK
Sbjct: 268 WDGYGISFGRPSTNINIRRLIGKTT-SAGIAIGSEMSGGVSEVHAEDIYIFDSHSAIRIK 326
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
T+ GRGG+V++VY+ M + + A TG YG HPD+ YDP ALPVI+ I +D++
Sbjct: 327 TSPGRGGYVRNVYISNMILANVDIAIRFTGLYGEHPDDTYDPDALPVIERITIKDVIGVK 386
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH- 448
V A ++GI GD F IC+SN+T+ N KL WNC+ I G S V+P+ CE L +
Sbjct: 387 VKHAGLIQGIKGDNFVNICLSNITL---NVSSKLPWNCSYIKGFSDLVSPEACEPLKERI 443
Query: 449 EPAQTTECNFPDNRL 463
P ++C + N L
Sbjct: 444 FPEHCSDCYYLPNHL 458
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/420 (53%), Positives = 297/420 (70%), Gaps = 5/420 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NTKAF+ AI +L+ F +GG++LFVP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGRWLTGSFDLISHL 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL L KDAV+L S + ++WPV++PLPSYGRGR+ GGR+ SLI+G NLTDV+ITG+NGTI
Sbjct: 99 TLSLDKDAVILGSTNPEDWPVVDPLPSYGRGRELPGGRHKSLIYGHNLTDVIITGNNGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW +F L YTRP+L+E+M S + ISNLT +NSP W +HPVY S V VQ +
Sbjct: 159 DGQGSIWWNRFWNRSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
ILAP SPNTDGI+PDS N IEDCYI +GDD +A+KSGWD+YGIAYG P+ +II R
Sbjct: 219 RILAPHDSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + S IA+GSEMSGG+ +V AEDI DS + +RIKT+ GRGG+V+++YV +T+
Sbjct: 279 LVGRTQTSG-IAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTL 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A TG YG HPD+ Y+P+ALPVI+ I +D+V EN+ A +EGI GD F IC
Sbjct: 338 ANVDIAITFTGLYGEHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH-EPAQTTECNFPDNRLPVEN 467
+SN+ + +T WNC+ + G S V P+ CE L + P ++C + N++ N
Sbjct: 398 LSNIILNVT---SNYPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCYYLTNQIQSSN 454
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/397 (56%), Positives = 290/397 (73%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HSAS+ +FG VGDG T NTKAF+ A+ +L+ F +GG+QLFVP G+WLTGSF+L SH
Sbjct: 56 RPHSASITDFGAVGDGATLNTKAFQNALFYLNSFAKKGGAQLFVPAGRWLTGSFSLISHL 115
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL L KDAV+L S D +WPVI+ LPSYGRGR+ G R+ SLIFG+NLTDV+ITG NGTI
Sbjct: 116 TLSLDKDAVILGSTDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGSNGTI 175
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F L YTRP L+E+MYS + ISNLT INSP WN+HPVY S V+ Q +
Sbjct: 176 DGQGAVWWDWFHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHL 235
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP++SPNTDGI+PDS TN IEDCYI +GDD V +KSGWD+YGI++ P+ + IR
Sbjct: 236 TILAPISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRN 295
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T + SA +A GSEMSGGI DVRAE I ++S G+RIKTA GRGG+VK+VYV ++
Sbjct: 296 ITGQTRNSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSF 355
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A ITG+YG HPD+ Y+ ALP I NI +D+V N+ +A L+GI GD F+ IC
Sbjct: 356 DNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNIC 415
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV++ + + WNC+ + G S+ V+P+ CE L
Sbjct: 416 LSNVSLSVRSTDP---WNCSLVEGYSNSVSPEVCEQL 449
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/435 (52%), Positives = 301/435 (69%), Gaps = 13/435 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
S W +S+ C R HS S+ EFG VGDG T NT AF+ AI +L+ F +GG++
Sbjct: 28 STWTVWSSSCCNQINSYEVRPHSVSITEFGAVGDGITLNTIAFQNAIFYLNSFADKGGAK 87
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSF+L SH TL+L DAV+L S + +WPV++PLPSYG GR+ GGR+ S
Sbjct: 88 LFVPAGRWLTGSFDLISHLTLWLDNDAVILGSMNSDDWPVVDPLPSYGHGRELPGGRHRS 147
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LI+G NLTDVVITG+NGTIDGQG +WW F L YTRP+L+E+M S + ISN+T +N
Sbjct: 148 LIYGRNLTDVVITGNNGTIDGQGSIWWNNFWNKTLNYTRPHLVELMNSTGVLISNVTFMN 207
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP W +HPVY S V +Q +TI+AP++SPNTDGINPDS N IEDCYI +GDD +++KSG
Sbjct: 208 SPFWTIHPVYCSHVTIQNVTIIAPLSSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSG 267
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD YGI++G P+ + IRRL + SA IA+GSEMSGG+ +V AEDI DS S +RIK
Sbjct: 268 WDGYGISFGRPSTNINIRRLIGKTT-SAGIAIGSEMSGGVSEVHAEDIYIFDSHSAIRIK 326
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
T+ GRGG+V++VY+ M + + A TG YG HPD+ YDP ALPVI+ I +D++ E
Sbjct: 327 TSPGRGGYVRNVYISNMILVNVDIAIRFTGLYGEHPDDTYDPDALPVIERITIKDVIGEK 386
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH- 448
V A ++GI GD F IC+SN+T+ N KKL WNC+ + G S V+P+ CE L +
Sbjct: 387 VKRAGLIQGIKGDNFVNICLSNITL---NVSKKLPWNCSYVKGYSDLVSPEACEPLRERI 443
Query: 449 EPAQTTECNFPDNRL 463
P ++C + N L
Sbjct: 444 FPEHCSDCYYLPNHL 458
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 292/405 (72%), Gaps = 8/405 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG++LFVP G+WLTGSF+L SH
Sbjct: 49 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFSDKGGAKLFVPAGRWLTGSFDLISHL 108
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L K+AV+L S + +WPV++ LPSYGRGR+ GGR+ SLI+G NLTDVVITGDNGTI
Sbjct: 109 TLWLDKNAVILGSTNSDDWPVVDALPSYGRGRELPGGRHRSLIYGRNLTDVVITGDNGTI 168
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F+ L YTRP+L+E+M S I ISNLT INSP W +HPVY S VIVQ +
Sbjct: 169 DGQGSIWWTWFKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKVIVQNV 228
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI AP+ SPNTDGI+PDS + IEDC+I +GDD +A+KSGWD+YGI YG P + + IRR
Sbjct: 229 TIRAPLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRR 288
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + SA IA+GSEMSGG+ +V AE+I +S +G+RIKT+ GRGG+V+++YV +T+
Sbjct: 289 LVGQTRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTL 348
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A TG+YG HPD +YDP ALP+I+ I ++ +N+ A L+GI D F IC
Sbjct: 349 NDVNIAIRFTGNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNIC 408
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL-----PDH 448
+SN+++ +T K WNC+ I G S V+P+ CE L PDH
Sbjct: 409 LSNISLNVT---SKFPWNCSYIQGYSESVSPEICEPLRESIPPDH 450
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/405 (55%), Positives = 293/405 (72%), Gaps = 9/405 (2%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG++LFVP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPTGRWLTGSFDLISHL 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L KDAV+L S + +WPVI+PLPSYGRGR+ G R+ SLI+G NLTDV+ITGDNGTI
Sbjct: 99 TLWLDKDAVILGSTNSDDWPVIDPLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR L YTRP+L+E M + + ISNLT INSP W +HPVY S VIVQ +
Sbjct: 159 DGQGSIWWDWFRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS + +EDCY+ +GDD +A+KSGWD+YG++YG P+K + IRR
Sbjct: 219 TILAPLDSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + SA IA+GSEMSGG+ +V AE++ +S +G+RIKT+ GRGG+V+++Y+ M++
Sbjct: 279 LVGQTT-SAGIAIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSL 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+K A TG YG HPD YDP ALP+I+ I D+ +NV A LEGI GD F IC
Sbjct: 338 TDVKTAISFTGRYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDIC 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE-----LLPDH 448
+ N+ + +T+K WNC+ I G S V+P+ CE + PDH
Sbjct: 398 LLNINLSVTSKSP---WNCSYIQGYSDTVSPEICEPLRERIFPDH 439
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/332 (67%), Positives = 272/332 (81%), Gaps = 1/332 (0%)
Query: 7 AKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTT 66
+++ + I+L V I+ L+ E + + + +Y A+ CR HSA L +FG GDG T
Sbjct: 7 SRKPHALGIVLAVLILGLLSFRVAECQTSSFMEPIKYKALRCRKHSAVLTDFGATGDGKT 66
Query: 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
NTKAFK+AIDHLS+F +GG++L VPPGKWLTGSFNLTSHFTL++ KDAV+L +QDE
Sbjct: 67 INTKAFKSAIDHLSQFADDGGAELIVPPGKWLTGSFNLTSHFTLYIDKDAVILGAQDESA 126
Query: 127 WPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKY 186
+P+IE LPSYG GRD GGR+SSLIFGTNLTDVVITG NGT++GQG+ WW KFRA +
Sbjct: 127 YPLIEVLPSYGVGRDG-GGRHSSLIFGTNLTDVVITGGNGTLNGQGKYWWDKFRAKKYND 185
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
TRPYLIEIMYS ++QISNLTLI+SPSWNVHPVYS +V+V+ +TILAP+ SPNTDGINPDS
Sbjct: 186 TRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPNTDGINPDS 245
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C RIEDC+IVSGDDC+AVKSGWDQYG +GMPTK L+IRRLTCISP SA IALGSEMS
Sbjct: 246 CKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSATIALGSEMS 305
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
GGI++V AEDITAID++SG+RIKT +GRGG++
Sbjct: 306 GGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/414 (54%), Positives = 291/414 (70%), Gaps = 11/414 (2%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W S+I C R HS ++ EFG +GDG T NTKAF+ AI +L+ F +GG+QLF
Sbjct: 6 WSTVSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 65
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+WLTGSFNL SH TL L KDAV++ S D WPVI+PLPSYGRGR+ G R+ SLI
Sbjct: 66 VPAGRWLTGSFNLISHLTLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKRHQSLI 125
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
FG NLTDV+ITG NG+IDGQG +WW FR L YTRP+L+E+MYS N+ ISNLT NSP
Sbjct: 126 FGLNLTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSP 185
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+HPVY S V+VQ +TILAP+ SPNTDG++PDS TN I CY+ +GDD + +KSGWD
Sbjct: 186 FWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWD 245
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+YGI++ P+ + I +T + A IA GSEMSGGI +VRA + ++S G+RIKTA
Sbjct: 246 EYGISFAQPSSNISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTA 305
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+VK+VY+ ++M + A ITG+YG HPD+ YD ALPVI NI +D+V N+
Sbjct: 306 PGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIG 365
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+A LEGI GD F+ IC+SNV++ + + WNC+ I G S+ V P+ CE L
Sbjct: 366 VAGILEGIQGDNFSNICLSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQL 416
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/416 (54%), Positives = 293/416 (70%), Gaps = 11/416 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+ W S I C R HS ++ EFG VGDG NTKAF+ AI +L+ F +GG+Q
Sbjct: 20 TQWPGVSGIYCKDMASGVYRPHSVTITEFGAVGDGVALNTKAFQNAIFYLNSFADKGGAQ 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTGSF+L SH TL L KDAV++ S D WPVI+PLPSYGRGR+ G R+ S
Sbjct: 80 LFVPAGRWLTGSFSLISHLTLSLDKDAVIIGSPDSSNWPVIDPLPSYGRGRELPGERHQS 139
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFG NLTDV+ITG NGTIDGQG +WW F L YTRP+L+E+MYS N+ ISNLT N
Sbjct: 140 LIFGYNLTDVIITGANGTIDGQGAVWWDWFHNHTLNYTRPHLVELMYSTNVVISNLTFKN 199
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN+HPVY S V+V+ +TILAP+ SPNTDGINPDS TN I+ CY+ +GDD + +KSG
Sbjct: 200 SPFWNIHPVYCSQVLVEHLTILAPLDSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSG 259
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++ P+ + I +T + A IA+GSEMSGGI +VRAE + ++S G+RIK
Sbjct: 260 WDEYGISFAHPSSNISITNITGETRGGAGIAIGSEMSGGISEVRAERLRIVNSLHGIRIK 319
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+V++VY+ ++M + A ITG+YG HPDNNYD +ALP+I NI ++V N
Sbjct: 320 TAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDNNYDRNALPMISNITIENVVGIN 379
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
V +A LEGI GD F+ ICISNV++ + + WNC+ I G S+ V P+ C+ L
Sbjct: 380 VGIAGILEGIEGDNFSSICISNVSLSVQSMHP---WNCSLIQGYSNSVIPESCDQL 432
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/397 (55%), Positives = 290/397 (73%), Gaps = 4/397 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG++LFVP G+WLTGSF+L SH
Sbjct: 32 RPHSVAITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHL 91
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L KDA++L S + +WPVI+ LPSYGRGR+ G R+ SLI+G NLTDV+ITGDNGTI
Sbjct: 92 TLWLDKDAIILGSTNSDDWPVIDSLPSYGRGRELPGRRHKSLIYGRNLTDVIITGDNGTI 151
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR L YTRP+L+E+M + + ISNLT +NSP W +HPVY S VIVQ +
Sbjct: 152 DGQGSIWWNWFRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVIVQNV 211
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWD+YG +Y P+K + IR
Sbjct: 212 TILAPLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRG 271
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L + SA IA+GSEMSGG+ +V AE++T +S +G+RIKTA GRGG+V+++Y+ M++
Sbjct: 272 LVGQTT-SAGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSL 330
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+K A TG YG HPD +YDP ALP+I+ I D+ +NV A LEG+ GD F IC
Sbjct: 331 TDVKTAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDIC 390
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN+ + +T+K WNC+ I G S V+P+ CE L
Sbjct: 391 LSNINLSVTSKSP---WNCSYIQGYSEAVSPEICEPL 424
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 300/419 (71%), Gaps = 4/419 (0%)
Query: 42 EYSAISC--RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
EYS+++ R HS S+ EFG VGDG T NTKAF+ A+ +L+ F +GG++LFVP G+WLT
Sbjct: 30 EYSSLASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLT 89
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSF+L SH TL+L K A +L S + WPV++PLPSYGRGR+ G R+ SLI+G NLTDV
Sbjct: 90 GSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDV 149
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG+NGTIDGQG +WW FR GEL YTRP+L+E+M S + ISNLT +NSP WN+HPVY
Sbjct: 150 VITGENGTIDGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVY 209
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
V+V+ +TILAP+ SPNTDG++PDS TN IEDCYIV+GDD V++KSGWD+YGI+Y
Sbjct: 210 CRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYAR 269
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +D+ +S +G+RIKT+ GRGG+V+
Sbjct: 270 PSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVR 329
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
+V++ + + +K A TG YG HPD +DP ALP I+ I + ++ + + +A LEGI
Sbjct: 330 NVHILNVKLDNVKKAIRFTGKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGI 389
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK-PCELLPDH-EPAQTTEC 456
AGD F IC NVT+ + KK W C+++ G S V+P+ C+ L + P ++C
Sbjct: 390 AGDEFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHQSDC 448
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 298/419 (71%), Gaps = 4/419 (0%)
Query: 42 EYSAISC--RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
EYS ++ R HS S+ EFG VGDG T NTKAF+ A+ +L+ F +GG++LFVP G+WLT
Sbjct: 30 EYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLT 89
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSF+L SH TL+L K A +L S + WPV++PLPSYGRGR+ G R+ SLI+G NLTDV
Sbjct: 90 GSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDV 149
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG+NGTIDGQG +WW FR GEL YTRP+L+E+M S + ISNLT +NSP WN+HPVY
Sbjct: 150 VITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVY 209
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
V+V+ +TILAP+ SPNTDG++PDS TN IEDCYIV+GDD V++KSGWD+YGI+Y
Sbjct: 210 CRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYAR 269
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +D+ +S +G+RIKT+ GRGG+V+
Sbjct: 270 PSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVR 329
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
+V++ + + +K A TG YG HPD YDP ALP I+ I + ++ + + +A LEGI
Sbjct: 330 NVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGI 389
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK-PCELLPDH-EPAQTTEC 456
GD F IC NVT+ + KK W C+++ G S V+P+ C+ L + P ++C
Sbjct: 390 EGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDC 448
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/414 (53%), Positives = 288/414 (69%), Gaps = 11/414 (2%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W S+I C R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLF
Sbjct: 22 WSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 81
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+WLTGSF+L SH TL L KDA+++ S D WPVI+PLPSYGRGRD G R+ SLI
Sbjct: 82 VPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLI 141
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
FG NLTDV+ITG NG+IDGQG +WW F L YTRP+L+E+MYS N+ ISNLT NSP
Sbjct: 142 FGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSP 201
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+HPVY S V+VQ +TILAP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWD
Sbjct: 202 FWNIHPVYCSQVLVQHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWD 261
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+YGI++ P+ + I +T + + IA GSEMSGGI +VRA + ++S G+RIKTA
Sbjct: 262 EYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTA 321
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+V++VY+ ++M + A ITG+YG HPD+ YD ALPVI NI +D+V N+
Sbjct: 322 PGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIG 381
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+A LEGI GD F+ IC+SNV++ + + WNC+ I G S+ V P+ CE L
Sbjct: 382 VAGILEGIQGDNFSNICLSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQL 432
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 298/419 (71%), Gaps = 5/419 (1%)
Query: 42 EYSAISC--RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
EYS ++ R HS S+ EFG VGDG T NTKAF+ A+ +L+ F +GG++LFVP G+WLT
Sbjct: 30 EYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLT 89
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSF+L SH TL+L K A +L S K WPV++PLPSYGRGR+ G R+ SLI+G NLTDV
Sbjct: 90 GSFDLISHLTLWLDKGATILGST-AKNWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDV 148
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG+NGTIDGQG +WW FR GEL YTRP+L+E+M S + ISNLT +NSP WN+HPVY
Sbjct: 149 VITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVY 208
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
V+V+ +TILAP+ SPNTDG++PDS TN IEDCYIV+GDD V++KSGWD+YGI+Y
Sbjct: 209 CRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYAR 268
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +D+ +S +G+RIKT+ GRGG+V+
Sbjct: 269 PSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVR 328
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
+V++ + + +K A TG YG HPD YDP ALP I+ I + ++ + + +A LEGI
Sbjct: 329 NVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGI 388
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK-PCELLPDH-EPAQTTEC 456
GD F IC NVT+ + KK W C+++ G S V+P+ C+ L + P ++C
Sbjct: 389 EGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKESIFPEHGSDC 447
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/397 (55%), Positives = 289/397 (72%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLFVP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL L KDA ++ S D +WPVI+PLPSYGRGR+ G R+ SLIFGTNLTDV+ITG NGTI
Sbjct: 99 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L YTRP+L+E+MYS ++ ISNLT NSP WN+HPVY S V+VQ +
Sbjct: 159 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS TN I+ CY+ +GDD + +KSGWD+YGI++ P+ + I
Sbjct: 219 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T + A IA GSEMSGGI +VRAE + ++S G+RIKTA GRGG+VK+VY+ ++M
Sbjct: 279 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 338
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A ITG++G HPD+ YD +ALP+I NI ++V NV +A LEGI GD F+ IC
Sbjct: 339 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 398
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV++ + + WNC+ I G S+ V P+ CE L
Sbjct: 399 LSNVSLSVQSMHP---WNCSLIEGYSNSVIPESCEQL 432
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/414 (53%), Positives = 288/414 (69%), Gaps = 11/414 (2%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W S+I C R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLF
Sbjct: 22 WSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 81
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+WLTGSF+L SH TL L KDA+++ S D WPVI+PLPSYGRGRD G R+ SLI
Sbjct: 82 VPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLI 141
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
FG NLTDV+ITG NG+IDGQG +WW F L YTRP+L+E+MYS N+ ISNLT NSP
Sbjct: 142 FGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSP 201
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+HPVY S V+V+ +TILAP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWD
Sbjct: 202 FWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWD 261
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+YGI++ P+ + I +T + + IA GSEMSGGI +VRA + ++S G+RIKTA
Sbjct: 262 EYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTA 321
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+V++VY+ ++M + A ITG+YG HPD+ YD ALPVI NI +D+V N+
Sbjct: 322 PGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIG 381
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+A LEGI GD F+ IC+SNV++ + + WNC+ I G S+ V P+ CE L
Sbjct: 382 VAGILEGIQGDNFSNICLSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCEQL 432
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/412 (53%), Positives = 287/412 (69%), Gaps = 11/412 (2%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W S+I C R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLF
Sbjct: 22 WSTVSSIYCKDMPPNVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLF 81
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+WLTGSF+L SH TL L KDA+++ S D WPVI+PLPSYGRGRD G R+ SLI
Sbjct: 82 VPAGRWLTGSFHLISHLTLSLDKDAIIIGSPDSSHWPVIDPLPSYGRGRDLPGKRHQSLI 141
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
FG NLTDV+ITG NG+IDGQG +WW F L YTRP+L+E+MYS N+ ISNLT NSP
Sbjct: 142 FGLNLTDVIITGANGSIDGQGAIWWGWFHNHTLNYTRPHLVELMYSTNVVISNLTFKNSP 201
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+HPVY S V+V+ +TILAP+ SPNTDG+ PDS TN I CY+ +G D + +KSGWD
Sbjct: 202 FWNIHPVYCSQVLVRHVTILAPLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWD 261
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+YGI++ P+ + I +T + + IA GSEMSGGI +VRA + ++S G+RIKTA
Sbjct: 262 EYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTA 321
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+V++VY+ ++M + A ITG+YG HPD+ YD ALPVI NI +D+V N+
Sbjct: 322 PGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIG 381
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
+A LEGI GD F+ IC+SNV++ + + WNC+ I G S+ V P+ CE
Sbjct: 382 VAGILEGIQGDNFSNICLSNVSLSVQSAHP---WNCSLIEGYSNSVIPESCE 430
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/397 (55%), Positives = 289/397 (72%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+QLFVP G+WLTGSF+L SH
Sbjct: 23 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 82
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL L KDA ++ S D +WPVI+PLPSYGRGR+ G R+ SLIFGTNLTDV+ITG NGTI
Sbjct: 83 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 142
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L YTRP+L+E+MYS ++ ISNLT NSP WN+HPVY S V+VQ +
Sbjct: 143 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 202
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ SPNTDGI+PDS TN I+ CY+ +GDD + +KSGWD+YGI++ P+ + I
Sbjct: 203 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 262
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T + A IA GSEMSGGI +VRAE + ++S G+RIKTA GRGG+VK+VY+ ++M
Sbjct: 263 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 322
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ A ITG++G HPD+ YD +ALP+I NI ++V NV +A LEGI GD F+ IC
Sbjct: 323 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 382
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV++ + + WNC+ I G S+ V P+ CE L
Sbjct: 383 LSNVSLSVQSMHP---WNCSLIEGYSNSVIPESCEQL 416
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/419 (51%), Positives = 295/419 (70%), Gaps = 4/419 (0%)
Query: 42 EYSAISC--RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
EYS ++ R HS S+ EFG VGDG T NTKAF+ A+ + + F +GG++LFVP G+WLT
Sbjct: 30 EYSNLASLHRPHSVSITEFGAVGDGVTLNTKAFQNALFYPNSFSDKGGAKLFVPAGQWLT 89
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSF+L SH TL+L A +L S + WPV++PLPSYGRGR+ G R+ SLI+G NLTDV
Sbjct: 90 GSFDLISHLTLWLDSGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDV 149
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG+NGTIDGQG +WW FR GEL YTRP+L+E+M S + ISNLT +NSP WN+HPVY
Sbjct: 150 VITGENGTIDGQGSVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVY 209
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
V+V+ +TILAP+ SPNTDG++PDS TN IEDCYIV+ DD V++K+GWD+YGI+Y
Sbjct: 210 CRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYAR 269
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+ ++ I RLT + S+ IA+GSEMSGG+ ++ +D+ +S +G+RIKT+ GRGG+V+
Sbjct: 270 PSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVR 329
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
+V++ + + +K A TG YG HPD N+DP ALP I+ I + ++ + + +A LEGI
Sbjct: 330 NVHILNVKLDNVKKAIRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGI 389
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK-PCELLPDH-EPAQTTEC 456
GD F IC NVT+ + KK W C+++ G S V+P C+ L + P ++C
Sbjct: 390 EGDEFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPGITCDSLKESIFPEHRSDC 448
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/416 (54%), Positives = 294/416 (70%), Gaps = 11/416 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+ W S + C R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+Q
Sbjct: 20 TQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQ 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTG FNL SH TL L KDAV++ S +WPVI+PLPSYGRGR+ GGR+ S
Sbjct: 80 LFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQS 139
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFG+NLTDV+ITG NGTIDGQG WW F L YTRP+L+E+MYS ++ ISNLT N
Sbjct: 140 LIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKN 199
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN+HPVY S VIV+ +TILAP+ SPNTDGINPDS TN I CY+ +GDD + +KSG
Sbjct: 200 SPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSG 259
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++ + + I +T + A IA+GSEMSGGI +VRAE + ++S G+RIK
Sbjct: 260 WDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIK 319
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+V++VY+ ++M + A ITG+YG HPD+ YD +ALP+I NI ++V +
Sbjct: 320 TAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGID 379
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
V +A LEGI GD F+ ICISNV++ + +P + WNC+ I G S+ VTP+ CE L
Sbjct: 380 VGVAGILEGIEGDNFSSICISNVSLSV--RP-RYPWNCSRIQGYSNSVTPESCEQL 432
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/416 (54%), Positives = 293/416 (70%), Gaps = 11/416 (2%)
Query: 38 SDWFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+ W S + C R HS ++ EFG VGDG T NTKAF+ AI +L+ F +GG+Q
Sbjct: 20 TQWSSVSGMYCADMASTVYRPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQ 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
LFVP G+WLTG FNL SH TL L KDAV++ S +WPVI+PLPSYGRGR+ GGR+ S
Sbjct: 80 LFVPAGRWLTGGFNLISHLTLSLDKDAVIIGSPHSSDWPVIDPLPSYGRGRELPGGRHQS 139
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LIFG+NLTDV+ITG NGTIDGQG WW F L YTRP+L+E+MYS ++ ISNLT N
Sbjct: 140 LIFGSNLTDVIITGANGTIDGQGAYWWDWFHNHTLNYTRPHLVELMYSTSVVISNLTFKN 199
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN+HPVY S VIV+ +TILAP+ SPNTDGINPDS TN I CY+ +GDD + +KSG
Sbjct: 200 SPFWNIHPVYCSQVIVEHVTILAPLDSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSG 259
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI++ + + I +T + A IA+GSEMSGGI +VRAE + ++S G+RIK
Sbjct: 260 WDEYGISFAQSSSNISISNITGETGGGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIK 319
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+V++VY+ ++M + A ITG+YG HPD+ YD +ALP+I NI ++V +
Sbjct: 320 TAPGRGGYVRNVYIADVSMHNVSMAIRITGNYGEHPDSKYDKNALPIISNITIENVVGID 379
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
V +A LEGI GD F+ ICISNV++ + + + WNC+ I G S+ VTP+ CE L
Sbjct: 380 VGVAGILEGIEGDNFSSICISNVSLSVRS---RYPWNCSRIQGYSNSVTPESCEQL 432
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/454 (48%), Positives = 307/454 (67%), Gaps = 41/454 (9%)
Query: 24 SLNTNGVESRK--ARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSR 81
SL ++G S + + D+ E++A++CR SA L +FG +GDG TSNTKAF+ AI +L+
Sbjct: 24 SLKSDGTHSARFPTPSRDFVEHAALNCRRQSAILTDFGAIGDGKTSNTKAFREAIRNLTS 83
Query: 82 FQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD 141
+GGSQL VP GKWLTGSFNLTSHFTL + + A +LASQDE E+P+++ LPSY RD
Sbjct: 84 RAGDGGSQLIVPKGKWLTGSFNLTSHFTLHIKEGATILASQDESEYPMLQVLPSY---RD 140
Query: 142 TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-YTRPYLIEIMYSQNI 200
T R++SLI+G+NLTDVVI GD GTI+GQG+ WW K+R G K RP LIEI S+N+
Sbjct: 141 T---RFASLIYGSNLTDVVIAGDKGTINGQGKSWWAKYRNGGFKSIQRPMLIEIQSSENV 197
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
QISN+ LI+SP W++HPVY +VI++G+ I P+ S NTDGINP
Sbjct: 198 QISNINLIDSPMWSIHPVYCRNVIIKGVKISNPIDSANTDGINP---------------- 241
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
G P + L+IRR +CI+P A IA+GSEMSGGI+ VR ED+T
Sbjct: 242 ----------------VGRPIEMLLIRRFSCIAPNGAGIAMGSEMSGGIKGVRMEDVTLH 285
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNI 380
+++S ++I+TA+GRGG+V++V+ RR T+KT K+ F +TGS+ P + P A PV+ NI
Sbjct: 286 NTQSAIKIETAMGRGGYVQNVWARRFTIKTSKYVFLMTGSHKPIPRDGNIPKAKPVVTNI 345
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK 440
N+RD+ ENV+ +A+LEG+ +PFTG+C+SNV+I L+ K Q++C DI G S V P+
Sbjct: 346 NFRDITGENVSTSAKLEGMKSNPFTGVCMSNVSISLSPNASKQQFHCMDIVGESRSVKPQ 405
Query: 441 PCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474
PC LLPD P EC FP ++P+EN+ ++ C+
Sbjct: 406 PCSLLPDKHPGVRFECTFPTEKIPIENVVLKRCA 439
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/396 (52%), Positives = 285/396 (71%), Gaps = 1/396 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ +L F +GG+QL+VP G+WLTGSF L SH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL +V+LASQD +WP+I+PLPSYGRGRD G R+ SL++G +L DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDLEDVVITGGNGTI 151
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR L YTR +L+E + S+NI +SN++L+NSPSW +HPVY S+V+++G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T++AP SPNTDG+ PDSCT IEDC I SG D V+VKSGWD+YGI G+P+ +++IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRR 271
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T +P SA IA GSEMSGGI++V ED+ +S+ GV +KT GRGG+VK++ V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 349 KTMKWAFWITGSYGS-HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ A ++G+ S HPD YDP A PV++ I + N++ A L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
C+SN+T+E+ + + +W+C+++ G S GVTP PC
Sbjct: 392 CLSNITLEVDDASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/396 (52%), Positives = 284/396 (71%), Gaps = 1/396 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ +L F +GG+QL+VP G+WLTGSF L SH
Sbjct: 32 RPHSVSITEFGAVGDGQTVNTVAFQNAVFYLQSFAHKGGAQLYVPAGRWLTGSFTLISHL 91
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL +V+LASQD +WP+I+PLPSYGRGRD G R+ SL++G ++ DVVITG NGTI
Sbjct: 92 TLFLDTGSVILASQDPHDWPLIDPLPSYGRGRDLPGRRHRSLVYGKDVEDVVITGGNGTI 151
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR L YTR +L+E + S+NI +SN++L+NSPSW +HPVY S+V+++G+
Sbjct: 152 DGQGSVWWHWFRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGV 211
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T++AP SPNTDG+ PDSCT IEDC I SG D V+VKSGWD+YGI G+P+ +++IRR
Sbjct: 212 TVVAPSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRR 271
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T +P SA IA GSEMSGGI++V ED+ +S+ GV +KT GRGG+VK++ V +TM
Sbjct: 272 ITAQAPASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTM 331
Query: 349 KTMKWAFWITGSYGS-HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ A ++G+ S HPD YDP A PV++ I + N++ A L G+ PF I
Sbjct: 332 DSVLTAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDI 391
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
C+SN+T+E+ + +W+C+++ G S GVTP PC
Sbjct: 392 CLSNITLEVDEASQGSKWDCSNVKGASLGVTPTPCR 427
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/388 (55%), Positives = 279/388 (71%), Gaps = 7/388 (1%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGR 138
+ R ++GG++LFVP G+WLTGSFNL SH T+ L DAV++ SQD +WPVI+PLPSYGR
Sbjct: 39 VHRPHNKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGR 98
Query: 139 GRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQ 198
GR+ G R+ SLIFG+NLTDV+ITG NGTIDGQGELWW F L YTRP L+E+MYS
Sbjct: 99 GRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSD 158
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
+ ISNLT +N+P WN+HPVY S V+VQ +TILAP++SPNTDGI+PDS +N IEDCYI
Sbjct: 159 RVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIR 218
Query: 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT 318
+GDD V +KSGWD+YGI++ P+ + IR +T + SA IA GSEMSGGI DVRAE +
Sbjct: 219 NGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLR 278
Query: 319 AIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQ 378
I+S G+RIKTA GRGG+VK++Y+ ++M + A ITG+YG HPD+NYD +ALPVI
Sbjct: 279 FINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVIS 338
Query: 379 NINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVT 438
NI +++V N+ A L GI GD F+ IC+SNV+ L++K WNC+ I G S+ V
Sbjct: 339 NITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVS--LSSKSAD-PWNCSLIEGFSNSVA 395
Query: 439 PKPCE-LLPDHEPAQTTECNFPDNRLPV 465
P+ CE L P P Q + N PV
Sbjct: 396 PEICEQLRPSPGPGQVC---YDGNSYPV 420
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/304 (66%), Positives = 250/304 (82%), Gaps = 5/304 (1%)
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KF + TRPY+IEIM+S IQISNLTL+NSPSW VHP+YSS++ ++G+TILAPV
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 61
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
SPNTDGI+PDSCTNTRIEDCYIVSGDDCVAVKSGWD+YGI +G PT+ L+IRRLTCISP
Sbjct: 62 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 121
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG--FVKDVYVRRMTMKTMK 352
SAVIALGSEMSGGIQDVR EDI AI ++S VRIKTAVGRG +VKD++V+ M++ TMK
Sbjct: 122 DSAVIALGSEMSGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMK 181
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
+ FW+TGSYGSHPD +DP ALP I INYRD+VA NVT +A+LEGI+ PFTGICISNV
Sbjct: 182 YVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNV 241
Query: 413 TIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQM 472
+I+++ + KKLQWNCTD+ G++S V+P C+LLP+ C FP+++LP+EN+ ++
Sbjct: 242 SIQVSEQRKKLQWNCTDVAGVTSNVSPNSCQLLPEK---GKLGCPFPNDKLPIENVQLKT 298
Query: 473 CSYK 476
CS K
Sbjct: 299 CSLK 302
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 284/417 (68%), Gaps = 2/417 (0%)
Query: 27 TNGVESR-KARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSE 85
+N VES + R + R HS S+ EFG VGDG T NT AF+ AI +L F +
Sbjct: 12 SNAVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADK 71
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG+QL+VPPGKWLTGSFNLTSH TLFL + AV+L SQD W VIEPLPSYGRG + GG
Sbjct: 72 GGAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGG 131
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNL 205
RY SLI G L DVVITGDNGTI+GQG +WW F + L Y+RP+L+E + S N+ +SNL
Sbjct: 132 RYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNL 191
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T +N+P++N+HPVY S+V VQ I++ AP SP T GI PDS +T IEDC I G D +A
Sbjct: 192 TFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIA 251
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSGWD+YGIAYG PT + IRR+ S + +A GSEMSGGI +V E + +S SG
Sbjct: 252 LKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSG 311
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDM 385
+ +T GRGG+++++ + + M+ + AF TG GSHPD+++DP+ALPV+ +I +++
Sbjct: 312 IEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNV 371
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+ N+T+A GI PFT IC+SN+++ T P + W C++++G S V P+PC
Sbjct: 372 IGTNITIAGSFTGIQESPFTSICLSNISLS-TTPPASISWVCSNVSGFSQWVFPEPC 427
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/417 (50%), Positives = 284/417 (68%), Gaps = 2/417 (0%)
Query: 27 TNGVESR-KARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSE 85
+N VES + R + R HS S+ EFG VGDG T NT AF+ AI +L F +
Sbjct: 14 SNAVESNGQERGGQCTNSLTLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADK 73
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG+QL+VPPGKWLTGSFNLTSH TLFL + AV+L SQD W VIEPLPSYGRG + GG
Sbjct: 74 GGAQLYVPPGKWLTGSFNLTSHLTLFLERGAVILGSQDPSHWEVIEPLPSYGRGIELPGG 133
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNL 205
RY SLI G L DVVITGDNGTI+GQG +WW F + L Y+RP+L+E + S N+ +SNL
Sbjct: 134 RYRSLINGYMLRDVVITGDNGTINGQGSVWWDWFTSHSLNYSRPHLVEFLASTNVVVSNL 193
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T +N+P++N+HPVY S+V VQ I++ AP SP T GI PDS +T IEDC I G D +A
Sbjct: 194 TFLNAPAYNIHPVYCSNVRVQNISVYAPPESPYTVGIVPDSSDSTCIEDCSIAMGHDAIA 253
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSGWD+YGIAYG PT + IRR+ S + +A GSEMSGGI +V E + +S SG
Sbjct: 254 LKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVCVEQVHLYNSFSG 313
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDM 385
+ +T GRGG+++++ + + M+ + AF TG GSHPD+++DP+ALPV+ +I +++
Sbjct: 314 IEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNALPVLDHITLQNV 373
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+ N+T+A GI PFT IC+SN+++ T P + W C++++G S V P+PC
Sbjct: 374 IGTNITIAGSFTGIQESPFTSICLSNISLS-TTPPASISWVCSNVSGFSQWVFPEPC 429
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/419 (50%), Positives = 290/419 (69%), Gaps = 12/419 (2%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQS--EGGSQLFVPPGKWLTGSFN 103
I R HSAS+ +FG +GDG T NT AF+ A+ +LS + +GG+ L+VP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
LTSHFTL+L + AV+L SQD +WP+I+PLPSYGRGR+ GGR+ SL+ G NL DVVITG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 164 DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+NGTIDGQG WWR + G L +TR +L+E + S NI ISN+TL+NSP W +HPVY ++V
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
++QG+TILAP SPNTDGI+PDS +N I+DCYI +GDD +A+KSGWD+YGIAYG P+
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
+ IRR+T + A IA+GSE SGGI++V ED+ A+ ++SG+ I+T VGRG ++++V +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVL 321
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+T+ ++ A I+G HPDN ++ A PV++ + R + + R+ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 404 FTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNR 462
F IC+ ++ ++ T W CTD+ G SS VTPK C +Q +E N PD R
Sbjct: 382 FRDICLEDIALDATTGLTA--WKCTDVEGYSSSVTPKIC--------SQLSENNTPDAR 430
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/409 (51%), Positives = 282/409 (68%), Gaps = 3/409 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+++FGGVGDG T NTKAF+AAI + + GG+ L++PPG +LT SFNLTSH
Sbjct: 39 RNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLYIPPGVYLTESFNLTSHM 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L KDAV+ A+QD WP+I PLPSYGRGR+ GGRY S I + DV+ITG+NGTI
Sbjct: 99 TLYLSKDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFIHADGVHDVIITGENGTI 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW +R L++TRP LIE++ S+NI ISN+ +SP WN+HPVY +V+VQ +
Sbjct: 159 DGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFV 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAYG P+ + IRR
Sbjct: 219 TILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ IA+GSE SGG+Q+V AE I + G+ +KT +GRGG ++++ V + M
Sbjct: 279 ITGSSPFAG-IAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYM 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + I G G HPD+N++P+ALPV++ + RD+ +V + G+ PFTGIC
Sbjct: 338 EKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGIC 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECN 457
+S + + KP W C+D++G + GV+P PC L P QT C+
Sbjct: 398 LSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELT--SPGQTGSCS 444
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/414 (50%), Positives = 288/414 (69%), Gaps = 9/414 (2%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQS--EGGSQLFVPPGKWLTGSFN 103
I R HSAS+ +FG +GDG T NT AF+ A+ +LS + +GG+ L+VP G+WLTGSFN
Sbjct: 22 IGARPHSASIVDFGAIGDGVTLNTLAFQNAMFYLSSITATDKGGAMLYVPEGRWLTGSFN 81
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
LTSHFTL+L + AV+L SQD +WP+I+PLPSYGRGR+ GGR+ SL+ G NL DVVITG
Sbjct: 82 LTSHFTLYLERGAVILGSQDPSQWPIIDPLPSYGRGRELPGGRHISLVHGENLEDVVITG 141
Query: 164 DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+NGTIDGQG WWR + G L +TR +L+E + S NI ISN+TL+NSP W +HPVY ++V
Sbjct: 142 ENGTIDGQGAKWWRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNV 201
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
++QG+TILAP SPNTDGI+PDS +N I+DCYI +GDD +A+KSGWD+YGIAYG P+
Sbjct: 202 LIQGVTILAPQDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSN 261
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
+ IRR+T + A IA+GSE SGGI++V ED+ A+ ++SGV I+T VGRG ++++V +
Sbjct: 262 IHIRRVTGQTKRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVL 321
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+T+ ++ A I+G HPDN Y+ A PV++ + R + + R+ GI P
Sbjct: 322 SSITLLDIQTAITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVP 381
Query: 404 FTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL-----PDHEPAQ 452
F IC+ ++ ++ + W CTD+ G SS VTPK C+ L PD P Q
Sbjct: 382 FRDICLEDIALDASTGLTA--WKCTDVEGYSSSVTPKICKELSENNSPDACPFQ 433
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/397 (53%), Positives = 277/397 (69%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FGGVGDG T NTKAF+AAI + + GG+ L++PPG +LT SFNLTSH
Sbjct: 37 RYDKISITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L K AV+ A QD WP+I+PLPSYGRGR+ GGRY S I G L DVVITG NGTI
Sbjct: 97 TLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW +R+ LKYTRP LIE S+ I ISN+ NSP WN+HPVY S+V++ +
Sbjct: 157 DGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS N IED YI +GDD VA+KSGWDQYGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRR 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ IA+GSE SGGI+++ AE IT + GV IKT +GRGG++K++ + + +
Sbjct: 277 ITGSSPFAG-IAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYV 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
T K+ I G G HPD NY+P+ALPV++ I+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+S + + + K W C+D++G S V+P PC L
Sbjct: 396 LSEINLHGSLNSYK-TWKCSDVSGTSLKVSPWPCSEL 431
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 245/293 (83%), Gaps = 4/293 (1%)
Query: 36 RNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS--QLFVP 93
R S Y A +CRAH+AS+ +FGGVGDGTTSNT AF++A+DHLS++ EGG L+VP
Sbjct: 35 RGSGQSMYLAPACRAHTASVADFGGVGDGTTSNTAAFRSAVDHLSQYSGEGGGGGMLYVP 94
Query: 94 PGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFG 153
GKWLTG FNLTSHFTL+LH+DAV+L SQD EWP+++PLPSYGRGRD GGR++SLI G
Sbjct: 95 AGKWLTGPFNLTSHFTLYLHQDAVILGSQDVGEWPIVDPLPSYGRGRDKVGGRFASLIGG 154
Query: 154 TNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSW 213
+NLTDVVITG NGTIDGQG +WW KF +LKYTR YLIE+M+S I ISNLTL+NSP+W
Sbjct: 155 SNLTDVVITGSNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAW 214
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
N+HPVYSS+++VQGITILAP SPNTDGINPDSC++ RIEDCYIVSGDDCVA+KSGWD+Y
Sbjct: 215 NIHPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEY 274
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326
GI+YGMP++ ++IRRLTC+SP SAVIALGSEMSGG VRA A E+GV
Sbjct: 275 GISYGMPSQHIVIRRLTCVSPTSAVIALGSEMSGG--GVRAAPDDAHHHEAGV 325
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
MSGGIQDVRAEDITAI++ES VRIKTAVGRG +V+
Sbjct: 1 MSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVR 35
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/397 (53%), Positives = 276/397 (69%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ E+GGVGDG T NTKAF+AAI + + GG+ L++PPG +LT SFNLTSH
Sbjct: 37 RYDKISITEYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L K AV+ A QD WP+I+PLPSYGRGR+ GGRY S I G L DVVITG NGTI
Sbjct: 97 TLYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW + + LKYTRP LIE S+ I ISN+ NSP WN+HPVY S+V++ +
Sbjct: 157 DGQGEVWWNMWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS N IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRR 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ IA+GSE SGGI+++ AE IT + GV IKT +GRGG++K++ + + +
Sbjct: 277 ITGSSPFAG-IAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYI 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
T K+ ITG G HPD NY+P+ALP+++ I+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKITGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+S + + + K W C+D+ G S V+P PC L
Sbjct: 396 LSEINLHGSLNSYK-TWKCSDVIGTSLKVSPWPCSEL 431
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/412 (50%), Positives = 276/412 (66%), Gaps = 2/412 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG TSNT AF+ AI +L F +GG+QL+VPPG+WLTGSFNLTSH
Sbjct: 58 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 117
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + A +L SQD W +++PLPSYGRG + GGRY SLI G NL+DVVITG+NGTI
Sbjct: 118 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 177
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+++E + S +I ISNLT +NSP+WN+HPVY S+V VQ I
Sbjct: 178 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 237
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T AP SP T G+ PDS IED I G D + +KSGWD+YGIAYG PT+ + IRR
Sbjct: 238 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 297
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + +A GSEMSGGI D+ E I DS +G+++KT GRGG++K + + + M
Sbjct: 298 VWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEM 357
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + TG SHPD+ YDP ALPV+ I ++DMV NV++A GI PFT IC
Sbjct: 358 ENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSIC 417
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTEC-NFP 459
+ N+++ +T+ K W C+++ G S V+P+PC L + C +FP
Sbjct: 418 LFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFP 468
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/397 (52%), Positives = 275/397 (69%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ ++GGVGDG T NTKAF+AAI + + GG+ L++PPG +LT SFNLTSH
Sbjct: 37 RYDKISITDYGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHM 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
T +L K AV+ A QD WP+I+PLPSYGRGR+ GGRY S I G L DVVITG NGTI
Sbjct: 97 TFYLAKGAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW +R+ LKYTRP LIE S+ I ISN+ NSP WN+HPVY S+V++ +
Sbjct: 157 DGQGEVWWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHV 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS N IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 217 TILAPQDSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRR 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ IA+GSE SGGI+++ AE IT + GV IKT +GRGG++K++ + + +
Sbjct: 277 ITGSSPFAG-IAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYI 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
T K+ I G G HPD NY+P+ALP+++ I+ +++ NV A ++G+ G PFTGIC
Sbjct: 336 DTAKYGIKIAGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+S + + + K W C+D+ G S V+P PC L
Sbjct: 396 LSEINLHGSLNSYK-TWKCSDVIGTSLKVSPWPCSEL 431
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/412 (50%), Positives = 276/412 (66%), Gaps = 2/412 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG TSNT AF+ AI +L F +GG+QL+VPPG+WLTGSFNLTSH
Sbjct: 123 RPHSVSILEFGAVGDGKTSNTIAFENAIFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 182
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + A +L SQD W +++PLPSYGRG + GGRY SLI G NL+DVVITG+NGTI
Sbjct: 183 TLFLERGATILGSQDFTHWEILDPLPSYGRGIELPGGRYRSLINGPNLSDVVITGNNGTI 242
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+++E + S +I ISNLT +NSP+WN+HPVY S+V VQ I
Sbjct: 243 DGQGSVWWENFSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNI 302
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T AP SP T G+ PDS IED I G D + +KSGWD+YGIAYG PT+ + IRR
Sbjct: 303 TAYAPPESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRR 362
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + +A GSEMSGGI D+ E I DS +G+++KT GRGG++K + + + M
Sbjct: 363 VWLQSSSGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEM 422
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + TG SHPD+ YDP ALPV+ I ++DMV NV++A GI PFT IC
Sbjct: 423 ENVGLTIGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSIC 482
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTEC-NFP 459
+ N+++ +T+ K W C+++ G S V+P+PC L + C +FP
Sbjct: 483 LFNISLSITSNSSK-PWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSSFP 533
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/397 (50%), Positives = 269/397 (67%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ AI +L F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 33 RPHSVTITEFGAVGDGVTVNTVPFQNAIFYLRSFADKGGAQLYVPKGRWLTGSFNLTSHL 92
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL KDAV++ +++ EWP++EPLPSYG+G D G R+ SLI G N+TDVVITG+NG I
Sbjct: 93 TLFLEKDAVIVGTKEVTEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGVI 152
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW FR+ +L Y+RP+L+E S+ I ISNLT +NSP+W +HPVY S+V V I
Sbjct: 153 DGQGLTWWNWFRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNI 212
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P +DGI PDSC+N IED I D +++KSGWD YGI +G PT + I R
Sbjct: 213 TIQTSLDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICR 272
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + A +ALGSEMSGGI DV + + S GV +TA GRGG+++DV + + M
Sbjct: 273 VDLQASLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQM 332
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + A TG + SHPD ++DP ALPVI I ++MV N+++A L GI GDPFT IC
Sbjct: 333 EDVHVAIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDIC 392
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV + + W+C++I+G S V P+PC L
Sbjct: 393 LSNVNFSIPDSAHSTSWSCSNISGYSELVFPEPCTDL 429
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/417 (49%), Positives = 277/417 (66%), Gaps = 9/417 (2%)
Query: 43 YSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPP 94
YS +C R+ S+ +FGGVGDG T NTKAF+AA+ + + GG+ L+VPP
Sbjct: 55 YSTTTCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPP 114
Query: 95 GKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGT 154
G +LT SFNLTSH TL+L AV+ A+Q+ WP+I PLPSYGRGR+ GGRY S I G
Sbjct: 115 GVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGD 174
Query: 155 NLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
L+DVVITG+NGTIDGQG++WW +R L++TRP L+E + SQ+I ISN+ NSP WN
Sbjct: 175 GLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWN 234
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HPVY S+V+V+ +TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YG
Sbjct: 235 IHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 294
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
IAYG P+ + IRRLT SPF+ IA+GSE SGG+++V AE I + G+ IKT GR
Sbjct: 295 IAYGRPSYGITIRRLTGSSPFAG-IAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGR 353
Query: 335 GGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAA 394
GG +K++ V + ++ + I G G HPD ++P+ALPV++ I +++ V A
Sbjct: 354 GGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAG 413
Query: 395 RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
+ G+ PFT +C+SN+ P+ W C+D+ G + V+P PC L EP
Sbjct: 414 LIHGLRNSPFTDVCLSNINFHGMRGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEPG 470
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/394 (51%), Positives = 269/394 (68%), Gaps = 4/394 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ +FG VGDG NT AF+ AI +L F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 1 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 60
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L SQD EWPVI LPSYGRGR+ GGR+ SLI G N+ DVVITG NGTI
Sbjct: 61 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 120
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F L +TR +L+E++ S++I ISN+T NSP W +HPVY S V++Q +
Sbjct: 121 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 180
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP +PN DGI+PDS +N I DCYI +GDD +++KSGWD++GI YGMP+ + I
Sbjct: 181 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 240
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ SP SA IA GSEMSGGI DV + + +S SG+RIKT GRGG++ ++ + + +
Sbjct: 241 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 300
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + AF T YG HPD+ YDP ALPVI+ I+ RD+V + A + G+ PF +C
Sbjct: 301 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 360
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+NV++ + WNC++ G S V P PC
Sbjct: 361 FANVSLSVGAG----AWNCSNTYGFSERVVPSPC 390
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/394 (51%), Positives = 269/394 (68%), Gaps = 4/394 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ +FG VGDG NT AF+ AI +L F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 58 RPHSVSITDFGAVGDGRIVNTLAFQNAIFYLKSFADKGGAQLYVPRGRWLTGSFNLTSHL 117
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L SQD EWPVI LPSYGRGR+ GGR+ SLI G N+ DVVITG NGTI
Sbjct: 118 TLFLEEGAVILGSQDLLEWPVIPALPSYGRGRELPGGRHISLIHGKNMVDVVITGANGTI 177
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F L +TR +L+E++ S++I ISN+T NSP W +HPVY S V++Q +
Sbjct: 178 DGQGSVWWDWFHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDV 237
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP +PN DGI+PDS +N I DCYI +GDD +++KSGWD++GI YGMP+ + I
Sbjct: 238 TILAPPYAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHN 297
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ SP SA IA GSEMSGGI DV + + +S SG+RIKT GRGG++ ++ + + +
Sbjct: 298 VSGQSPTSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQL 357
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + AF T YG HPD+ YDP ALPVI+ I+ RD+V + A + G+ PF +C
Sbjct: 358 ENVSVAFDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLC 417
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+NV++ + WNC++ G S V P PC
Sbjct: 418 FANVSLSVGAG----AWNCSNTYGFSERVVPSPC 447
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/247 (79%), Positives = 222/247 (89%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E RK R + EYSAISCRAHSASL +FGGVGDG T NTKAF+ A+ LS++ SEGG+QL
Sbjct: 27 ECRKGRILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQL 86
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
+VP GKWLTGSF+LTSHFTLFLH+DAVLLASQD +WPVI+PLPSYGRGRD GRY+SL
Sbjct: 87 YVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSL 146
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
IFGTNLTDV+ITGDNGTIDGQG LWW++F G+LKYTRPYLIE+MYS +IQISNLTL+NS
Sbjct: 147 IFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNS 206
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSWNVHPVYS ++++QGITILAPV SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW
Sbjct: 207 PSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 266
Query: 271 DQYGIAY 277
D+YGIAY
Sbjct: 267 DEYGIAY 273
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 71/95 (74%)
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCEL 444
MVAENV+MAARLEGI DPFTGICISNVTI L K KK+ W CTD+ GISSGVTP PC
Sbjct: 283 MVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCST 342
Query: 445 LPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANY 479
LPD P +T+ CNFP LP++ + +Q CSY NY
Sbjct: 343 LPDQGPEKTSLCNFPAESLPIDTVELQKCSYGINY 377
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/417 (49%), Positives = 278/417 (66%), Gaps = 9/417 (2%)
Query: 43 YSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPP 94
YSA +C R+ S+ +FGGVGDG T NTKAF+AA+ + + GG+ L+VPP
Sbjct: 23 YSAATCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPP 82
Query: 95 GKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGT 154
G +LT SFNLTSH TL+L AV+ A+Q+ WP+I PLPSYGRGR+ GGRY S I G
Sbjct: 83 GVYLTESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGD 142
Query: 155 NLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
L+DVVITG+NGTIDGQG++WW +R L++TRP L+E + SQ+I ISN+ NSP WN
Sbjct: 143 GLSDVVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWN 202
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HPVY S+V+V+ +TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YG
Sbjct: 203 IHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYG 262
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
IAYG P+ + IRR+T SPF+ IA+GSE SGG+++V AE I + G+ IKT GR
Sbjct: 263 IAYGRPSYGITIRRVTGSSPFAG-IAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGR 321
Query: 335 GGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAA 394
GG +K++ V + ++ + I G G HPD ++P+ALPV++ I +++ V A
Sbjct: 322 GGLIKNITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAG 381
Query: 395 RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
+ G+ PFT +C+S++ P+ W C+D+ G + V+P PC L EP
Sbjct: 382 LIHGLRNSPFTDVCLSDINFHGMEGPRSPSWKCSDVFGFAHQVSPWPCSQLSSQEPG 438
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 278/405 (68%), Gaps = 4/405 (0%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ R H+ S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPG WLT SFNL
Sbjct: 31 ALKPRPHTVSILEFGAVGDGKTLNTMAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 90
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TLFL K AV+L SQD W V++PLPSYGRG + GGRY SLI G L DVVITG+
Sbjct: 91 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLINGNMLHDVVITGN 150
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NG IDG G WW F + L Y+RP+LIE++ S ++ +SNLT +N+P++++HPVY S+V
Sbjct: 151 NGNIDGMGFAWWELFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVH 210
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
+ ++I AP SPNT GI PDS + IEDC I +G D +++KSGWD+YGIAYG PT+ +
Sbjct: 211 IHNVSISAPPESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 270
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
IRR+ + + IA GS+MSGGI ++ E++ +S+SG+ +T GRGG++K++ +
Sbjct: 271 HIRRVHLQASSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 330
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ M+ + A TG GSHPD+ +DP+ALP++ +I +DM+ N+T+A G+ PF
Sbjct: 331 DIEMENIYTAIAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 390
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
T IC+SN+T+ TN + W C++++G S V PKPC PD E
Sbjct: 391 TNICLSNITLS-TNSVSSIPWECSNVSGFSDYVLPKPC---PDLE 431
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/393 (49%), Positives = 267/393 (67%), Gaps = 1/393 (0%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
HS ++ EFG VGDG T NT +F+ A+ +L F +GG+QL++P G+WLTGSFNLTSH TL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
FL AV++ +QD +WPV+EPLPSYGRG D G R+ SLI G NL DVVITG+NGTIDG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLVDVVITGNNGTIDG 158
Query: 171 QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
QG WW FR+ +L Y+RP+L+E + S+ I ISN+T +NSP+W++HPVY S+V+V +TI
Sbjct: 159 QGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTI 218
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
+ +P GI PDSC+N IED I D +++KSGWD+ GIA+G PT + I RL
Sbjct: 219 QTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLD 278
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
S A +A GSEMSGGI D+ A+ + S GV KTA GRGG+++D + + M+
Sbjct: 279 LQSSLGAALAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMED 338
Query: 351 MKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICIS 410
+ A TG + SHPD+ +DP ALPV+ +I ++M +++A L GIAGDPFT IC+S
Sbjct: 339 VDVAIAFTGDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLS 398
Query: 411 NVTIELTNKPKKL-QWNCTDITGISSGVTPKPC 442
N+ L + W+C++++G S V P+PC
Sbjct: 399 NINFSLADSASPTSHWSCSNVSGYSELVFPEPC 431
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/410 (51%), Positives = 284/410 (69%), Gaps = 5/410 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FGGVGDG T NTKAF+AAI + + GG+ L++PPG +LTGSFNLTSH
Sbjct: 38 RNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFLTGSFNLTSHM 97
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L + AV+ A+QD WP+I PLPSYGRGR+ GGRY S I G L DVVITG+NGTI
Sbjct: 98 TLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHDVVITGENGTI 157
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG++WW +R L++TRP L+E + S+ I ISN+ NSP WN+HPVY S+V+++ +
Sbjct: 158 DGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIRFV 217
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAYG P+ + IRR
Sbjct: 218 TILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRR 277
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ IA+GSE SGG++ V AE+I D G+ +KT +GRGGF++++ + M
Sbjct: 278 ITGSSPFAG-IAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYM 336
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
K + I G G HPD+NY+P+ALPV++ I +R + ENV ++G+ PFTGIC
Sbjct: 337 KNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGIC 396
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC-ELLPDHEPAQTTECN 457
+SN+ + P+ W C+D++G + V+P PC EL H QT C+
Sbjct: 397 LSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPCSELATTH---QTGSCS 443
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/394 (49%), Positives = 269/394 (68%), Gaps = 1/394 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPG WLT SFNLTSH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNLTSHL 95
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV++ SQD W V++PLPSYGRG + GGRY SLI G L DVVITG+NGTI
Sbjct: 96 TLFLEKGAVIIGSQDHYNWDVLDPLPSYGRGLEVPGGRYQSLINGYMLQDVVITGNNGTI 155
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DG G WW F + L Y+RP+L+E++ S ++ +SNLT +N+P++N+HPVY +V + I
Sbjct: 156 DGMGSTWWESFSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNI 215
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+I AP SP T GI PDS + IEDC I +G D +A+KSGWD+YGIAYG PT+ + IRR
Sbjct: 216 SIFAPPESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRR 275
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + + + +A GS+MSGGI +V E + +S+ G+ +T GRGG++KD+ + + M
Sbjct: 276 VHLQASYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEM 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
K + A TG GSHPD+ +DP+ALP++ + ++D++ N+T+A G+ PFT IC
Sbjct: 336 KNIYRAISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+SN+T+ + N W C++++G S V P PC
Sbjct: 396 LSNITLSV-NYASSTSWECSNVSGFSDSVLPIPC 428
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/393 (49%), Positives = 266/393 (67%), Gaps = 1/393 (0%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
HS ++ EFG VGDG T NT +F+ A+ +L F +GG+QL++P G+WLTGSFNLTSH TL
Sbjct: 39 HSVTITEFGAVGDGVTLNTVSFQNAVFYLRSFADKGGAQLYIPRGRWLTGSFNLTSHLTL 98
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
FL AV++ +QD +WPV+EPLPSYGRG D G R+ SLI G NL DVVITG+NGTIDG
Sbjct: 99 FLESGAVIVGTQDVSQWPVVEPLPSYGRGMDLPGSRHRSLINGQNLIDVVITGNNGTIDG 158
Query: 171 QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
QG WW FR+ +L Y+RP+L+E + S+ I ISN+T +NSP+W++HPVY S+V+V +TI
Sbjct: 159 QGSTWWNWFRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTI 218
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
+ +P GI PDSC+N IED I D +++KSGWD+ GIA+G PT + I RL
Sbjct: 219 QTSLDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLD 278
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
S A + GSEMSGGI DV A+ + S GV KTA GRGG+++D + + M+
Sbjct: 279 LQSSLGAALTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMED 338
Query: 351 MKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICIS 410
+ A TG + SHPD+ +DP ALPV+ +I ++M +++A L GIAGDPFT IC+S
Sbjct: 339 VDVAIAFTGDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLS 398
Query: 411 NVTIELTNKPKKL-QWNCTDITGISSGVTPKPC 442
N+ L + W+C++++G S V P+PC
Sbjct: 399 NINFSLADSASPTSHWSCSNVSGYSELVFPEPC 431
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 270/397 (68%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGG GDG T NT AF A+ + R GG++L+VPPG WLTG FNLTS
Sbjct: 41 RGARVSVASFGGAGDGRTLNTAAFARAVATIERRAVPGGAELYVPPGVWLTGPFNLTSRM 100
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+IEPLPSYGRGR+ GGRY SLI G+ L DVVITG+NGTI
Sbjct: 101 TLFLARGAVVRATQDTSSWPLIEPLPSYGRGRELPGGRYISLIHGSGLQDVVITGENGTI 160
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW ++ G L YTRP+L+E+M S +I +SN+ +SP WN+HPVY S+V+++ +
Sbjct: 161 DGQGTPWWDMWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 220
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWD+YGIAYG P+ + +RR
Sbjct: 221 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRR 280
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ A+GSE SGG+++V AE + S G+ IKT GRGGF+++V V +T+
Sbjct: 281 ITGSSPFAG-FAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTL 339
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G+HPD Y+ ALP++ + +++ +N+ A ++GIA F+ IC
Sbjct: 340 DNVRYGLRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRIC 399
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV +LT W C ++G + V P PC L
Sbjct: 400 LSNV--KLTGGAPVQPWKCEAVSGGALDVQPSPCTEL 434
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/410 (48%), Positives = 275/410 (67%), Gaps = 1/410 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGSFNLTSH
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 92
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AVL+ +QD W V+EPLPSYGRG + GGRY SLI G L DVV+TG+NGTI
Sbjct: 93 TLFLEKGAVLIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 152
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DG G +WW + L ++RP+L+E + S + +SNLT +N+P++++HPVY S V +Q +
Sbjct: 153 DGMGMVWWDWYSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 212
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+I P SP T GI PDS N IEDC + G D +++KSGWD+YGIAYG PT+ + IRR
Sbjct: 213 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 272
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + + +A GS+MSGGI +V E +S SG+ +T GRGG++K++ + + M
Sbjct: 273 VQLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQM 332
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + A TG+ GSHPD+ +DP+ALP + +I +D++ N+T+A L GI PFT IC
Sbjct: 333 ENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNIC 392
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
+SN+T+ TN + W C++++G S V P+PC L + ++ C +
Sbjct: 393 LSNITLS-TNSVSPITWACSNVSGFSDSVLPEPCPELGNTSYDSSSSCFY 441
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/405 (48%), Positives = 276/405 (68%), Gaps = 4/405 (0%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ R H+ S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPG WLT SFNL
Sbjct: 42 ALKPRPHTVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGTWLTQSFNL 101
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TLFL K AV+L SQD W V++PLPSYGRG + GGRY SL+ G L DVVITG+
Sbjct: 102 TSHLTLFLEKGAVILGSQDPFHWEVVDPLPSYGRGVEVPGGRYQSLVNGYMLHDVVITGN 161
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NG IDG G WW F + L Y+RP+LIE++ S + +SNLT +N+P++++HPVY S+V
Sbjct: 162 NGIIDGMGLGWWELFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVH 221
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
+ ++I AP SP T GI PDS + IEDC I +G D +++KSGWD+YGIAYG PT+ +
Sbjct: 222 IHNVSISAPQESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENV 281
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
IRR+ + + IA GS+MSGGI ++ E++ +S+SG+ +T GRGG++K++ +
Sbjct: 282 HIRRVHLQAYSGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIIS 341
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ M+ + A TG GSHPD+ +DP+ALP++ +I +DM+ N+T+A G+ PF
Sbjct: 342 DIEMENIYTAMAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPF 401
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
T IC+SNVT+ + N + W C++++G S V PKPC PD E
Sbjct: 402 TNICLSNVTLSI-NSVSSIPWECSNVSGFSDSVLPKPC---PDLE 442
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/397 (50%), Positives = 276/397 (69%), Gaps = 1/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R +S S+ +FG VGDGTT NT AF+ A+ LS + +GG++L++P G+WLTGS L SH
Sbjct: 81 RPYSFSIIDFGAVGDGTTLNTHAFERAMLSLSNYADKGGAELYIPAGRWLTGSIRLISHL 140
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL A +L S+D ++P+I LPSYGRGR+ G RYSSLI G L DV+ITG+NGTI
Sbjct: 141 TLFLESGATILGSEDFNDYPLIPGLPSYGRGRELPGSRYSSLINGDGLEDVIITGNNGTI 200
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR+ L++TR +L+E++ +Q+I ISNLT NSP W +HPVYS +V+V+ +
Sbjct: 201 DGQGAVWWSSFRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRV 260
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TIL P+ SPNTDGI+PDS IEDCYI GDD +++KSGWDQYG +GMP+K + I+R
Sbjct: 261 TILNPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQR 320
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S SA I+ GSEMSGGI D+ +D+ +S GVR KT+VGRG ++++V V + M
Sbjct: 321 VVAFSHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVM 380
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
T++ A + G+YG HPD N++ A PVI+NI ++V EN+T A L G+ PF I
Sbjct: 381 HTVRTAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIH 440
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
++ V ++ T K+ WNC+ +TG + V PKPC L
Sbjct: 441 LTKVVLD-TRTTKQGPWNCSWVTGFYNFVLPKPCPEL 476
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/397 (52%), Positives = 281/397 (70%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ EFGGVGDG TSNT+ F+ AI +L RF GG+QL VP G+W+TGSFNLTS+F
Sbjct: 31 RKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNF 90
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L SQD KEWP+IEPLPSYGRGR+ GGR+ SL+ G LT+VVITG+NGTI
Sbjct: 91 TLFLEEGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTI 150
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG++WW + L++TR +L+E+M S NI I+NLT N+P W +HPVY S+V+V+ +
Sbjct: 151 DGQGKMWWELWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDM 210
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGI P+ +++RR
Sbjct: 211 TILAPLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRR 270
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ +P + + +GSEMSGGI ++ ED+ DS +GVRIKT GRGG++ ++ + +TM
Sbjct: 271 VSGTTPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTM 330
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ +K + HPD +DP A+PV++ I+ R++++ N T A LEG+ PF GIC
Sbjct: 331 ERVKVPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGIC 390
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+ NV+ L L W+C ++G + V P PC L
Sbjct: 391 MKNVS--LLGVVSSLSWHCEFVSGFADEVFPTPCPQL 425
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/397 (50%), Positives = 268/397 (67%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGSF+LTSH
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 94
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV+L SQD W +++PLPSYGRG + G RY SLI G LTDVV+TGDNGTI
Sbjct: 95 TLFLEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYRSLINGDMLTDVVVTGDNGTI 154
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+L+E S + +SNLT +N+P++N+HPVY S+V+VQ I
Sbjct: 155 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNI 214
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
++ AP SP T GI PDS N IED I G D +++KSGWD+YGIAY PT+ + IRR
Sbjct: 215 SVSAPGESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRR 274
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + IA GSEMSGGI +V E + +S SG+ +T GRGG++K + + + +
Sbjct: 275 VYLQSSSGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVEL 334
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
K + AF G GSHPD+++DP+A+P++ I +++ N+TMA G+A PFT IC
Sbjct: 335 KNINMAFGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSIC 394
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+ NV+ LT W C+++ G S V+P+PC L
Sbjct: 395 LFNVS--LTIPATSTSWTCSNVIGFSEFVSPEPCPEL 429
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 266/398 (66%), Gaps = 4/398 (1%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ +FGGV DG T NTKAF+ AIDH+ F GG+ L++P GKWLTG FNLTSH
Sbjct: 54 ARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSH 113
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DA +LAS+D ++WPV++PLPSYGRGR+ G RY+SL+ G +TDV ITG+NGT
Sbjct: 114 MTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGT 173
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQG +WW +FR+ L++TR L+E M+S NI + N+TLINSP W +HPVY+S V+++G
Sbjct: 174 IDGQGLIWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKG 233
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAP +PNTDG++PDS +N I D YI +GDD VAVKSGWD+YG+A+ P+ + +
Sbjct: 234 VTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLV 293
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
LT S I+LGSEMSGGI +V A ++ + G+ IKT+ GRG ++++
Sbjct: 294 NLTVSG--SHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFE 351
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ AF TG YG HPD Y+ A I+NI++RD+V V A G+ PF
Sbjct: 352 ILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHT 411
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
C ++V +EL K WNC+ I G S V+P PC L
Sbjct: 412 CFTDVALELNGKSN--HWNCSYIEGYSRHVSPPPCPEL 447
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/396 (52%), Positives = 284/396 (71%), Gaps = 2/396 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG TSNT+ F+ A+ ++ RF +GGSQL VP G+WLTGSFNLTS+FTLFL
Sbjct: 79 SIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLE 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ AV+L SQD KEWP+IEPLPSYGRGR+ GGR+ SLI G LT+V+ITG+NG+IDGQG+
Sbjct: 139 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGK 198
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L++TR +L+E+M S NI ISNLT NSP W +HPVY S+V+V+ +TILAP
Sbjct: 199 MWWELWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAP 258
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGI P+ +I+RR++ +
Sbjct: 259 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTT 318
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
P + + +GSEMSGGI +V +D+ DS +GVRIKT +GRGG++ ++ + +TM+ +K
Sbjct: 319 PTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKI 378
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
+ HPD +DP+A+PV++ ++ +++ N T A L+GI PF GIC+ NVT
Sbjct: 379 PIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVT 438
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
L W+C ++G ++ V P PC L +++
Sbjct: 439 --LVGLASSTSWHCEFVSGFANEVFPMPCPQLQNND 472
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/398 (49%), Positives = 266/398 (66%), Gaps = 4/398 (1%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ +FGGV DG T NTKAF+ AIDH+ F GG+ L++P GKWLTG FNLTSH
Sbjct: 25 ARPRVFSIADFGGVSDGITLNTKAFQKAIDHIGSFGKLGGATLYIPRGKWLTGCFNLTSH 84
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DA +LAS+D ++WPV++PLPSYGRGR+ G RY+SL+ G +TDV ITG+NGT
Sbjct: 85 MTLFLEQDATILASEDPQDWPVVDPLPSYGRGRELPGKRYTSLLHGLRITDVAITGNNGT 144
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQG +WW +FR+ L++TR L+E M+S NI + N+TLINSP W +HPVY+S V+++G
Sbjct: 145 IDGQGLVWWNRFRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKG 204
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAP +PNTDG++PDS +N I D YI +GDD VAVKSGWD+YG+A+ P+ + +
Sbjct: 205 VTILAPHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLV 264
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
LT S I+LGSEMSGGI +V A ++ + G+ IKT+ GRG ++++
Sbjct: 265 NLTVSG--SHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFE 322
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ AF TG YG HPD Y+ A I+NI++RD+V V A G+ PF
Sbjct: 323 ILDTGVAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHT 382
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
C ++V +EL K WNC+ I G S V+P PC L
Sbjct: 383 CFTDVALELNGKSN--HWNCSYIEGYSRHVSPPPCPEL 418
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/399 (47%), Positives = 269/399 (67%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ + F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL ++AV++ ++D +WP++EPLPSYG+G D G R+ SLI G NL+DVVITG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW + EL ++RP+++E ++S+ + ISNLT +NSP+W++HPVY S+V V +
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I G D +++KSGWD YGI++G PT + I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + A +A+GSEMSGGI D+ + I S G+ +T GRGG++ +V V + M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ A TG++ SHPD+++DP LPVI I ++M N+++A L GI GDPF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
+SN+ + + W C+++ G S V PKPC L D
Sbjct: 391 LSNLNFSIADSAPSSAWTCSNVHGYSELVFPKPCSELHD 429
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 276/410 (67%), Gaps = 1/410 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGSFNLTSH
Sbjct: 160 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 219
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV++ +QD W V+EPLPSYGRG + GGRY SLI G L DVV+TG+NGTI
Sbjct: 220 TLFLEKGAVIIGTQDPSHWDVVEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTI 279
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DG G +WW + L ++RP+L+EI+ S + +SNLT +N+P++++HPVY S V +Q +
Sbjct: 280 DGMGMVWWDWYSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNV 339
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+I P SP T GI PDS N IEDC + G D +++KSGWD+YGIAYG PT+ + IRR
Sbjct: 340 SISTPPESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRR 399
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + + +A GS+MSGGI +V E +S+SG+ +T GRGG++K++ + + M
Sbjct: 400 VHLHAFSGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQM 459
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + A TG+ GSHPD+ +DP+ALP + +I +D+ N+++A + GI PFT IC
Sbjct: 460 ENVHTAIAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNIC 519
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
+SN+T+ TN + W C++++G S V P+PC L + ++ C +
Sbjct: 520 LSNITLS-TNSVSPITWECSNVSGFSDSVLPEPCPELGNPSYDSSSSCFY 568
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/432 (46%), Positives = 278/432 (64%), Gaps = 6/432 (1%)
Query: 27 TNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG 86
+ +ES + + + A+ R HS S+ EFG VGDG T NT AF+ A+ + F +G
Sbjct: 14 STALESNGEDDHERCKQEAVDPRPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKG 73
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
G++L+VP GKWLTGSFNLTSH TLFL + A ++ASQD W ++PLPSYGRG D GR
Sbjct: 74 GAKLYVPSGKWLTGSFNLTSHLTLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPSGR 133
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
Y SLI+G NL+DVVITGDN IDGQG +WW L Y+RP++IE++ S NI ISNLT
Sbjct: 134 YRSLIYGQNLSDVVITGDNAIIDGQGSVWWDLIGTHSLNYSRPHIIELVGSDNITISNLT 193
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
+NSP+W++HPVY S+V +Q IT+ AP P T GI PDS + I + I +G D + +
Sbjct: 194 FLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSGIVPDSSEHVCIYNSNISTGHDAIVL 253
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326
KSGWDQYG+AYG PT ++ IR + S A +A GSEMSGGI D+ AE + +S G+
Sbjct: 254 KSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTIGI 313
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
+KT GRGG++K++++ ++ + +TGS GSHPD+ YDP+A+P + N+ + +++
Sbjct: 314 ELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVI 373
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLP 446
N+ +A GI PFT IC+ N T +++ W C+DI GIS V P+PC P
Sbjct: 374 GTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESSSPSWFCSDIMGISEEVFPEPC---P 430
Query: 447 DHEPAQTTECNF 458
D Q T NF
Sbjct: 431 D---LQNTYSNF 439
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/240 (79%), Positives = 216/240 (90%)
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DGINPDSCTNT+IEDCYIVSGDDCVAVKSGWD+YGIAYGMPTKQL+IRRLTCISP SAVI
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG 359
ALGSEMSGGI+DVRAEDI AI+SESGVRIKTA+GRGG+VKD+YV+ MTM+TMKW FW+TG
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 360 SYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
+YGSH DNNYDP+ALP+IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI L K
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 420 PKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKANY 479
PKKLQWNCTDI+GISS V P+PC LP+ P + CNFP++RL ++ + Q+CSY+ +
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNALPNQGPEKLPACNFPEDRLSIDEVEAQVCSYERKH 240
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/399 (47%), Positives = 269/399 (67%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ + F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 31 RPHSVTITEFGAVGDGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHL 90
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL ++AV++ ++D +WP++EPLPSYG+G D G R+ SLI G NL+DVVITG+NG I
Sbjct: 91 TLFLEEEAVIIGTKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVI 150
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW + EL ++RP+++E ++S+ + ISNLT +NSP+W++HPVY S+V V +
Sbjct: 151 DGQGSVWWDWLHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNV 210
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I G D +++KSGWD YGI++G PT + I R
Sbjct: 211 TIKTSLDAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISR 270
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + A +A+GSEMSGGI D+ + I S G+ +T GRGG++ +V V + M
Sbjct: 271 VDLQASSGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVM 330
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ A TG++ SHPD+++DP LPVI I ++M N+++A L GI GDPF+ IC
Sbjct: 331 DSVHLAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAIC 390
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
+SN+ + + W C+++ G S V PKPC L D
Sbjct: 391 LSNLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHD 429
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/410 (48%), Positives = 273/410 (66%), Gaps = 7/410 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ + F +GG++L+VP GKWLTGSFNLTSH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTVAFQNAVFYAKSFADKGGAKLYVPSGKWLTGSFNLTSHL 95
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + A ++ASQD W ++PLPSYGRG D GRY SLI+G NL+DVVITGDNG I
Sbjct: 96 TLFLERGATIIASQDYAHWTAMDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGII 155
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW L Y+RP++IE++ S NI ISNLT +NSP+W++HPVY S++ +Q I
Sbjct: 156 DGQGSVWWDLISTHSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKI 215
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+ AP P T GI PDS + I++C I +G D + +KSGWD+YG+AYG PT + IR
Sbjct: 216 TVQAPTKFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRG 275
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S A +A GSEMSGGI D+ AE + +S G+ +KT GRGG++K++++ +
Sbjct: 276 VYLQSSSGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKL 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + +TGS GSHPD+ YDP+A+P + N+ + +++ N+ +A GI PFT IC
Sbjct: 336 ENIYLGISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
+SNVT +++ W C+++ GIS V P+PC PD Q T NF
Sbjct: 396 LSNVTFSTSSE-SSPSWFCSNVMGISKEVFPEPC---PD---LQNTYSNF 438
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/397 (49%), Positives = 266/397 (67%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGSF+LTSH
Sbjct: 37 RPHSVSILEFGAVGDGKTLNTLAFQNAIFYLKSFTDKGGAQLYVPPGKWLTGSFSLTSHL 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLF+ K AV+L SQD W +++PLPSYGRG + G RY SLI G L DVV+TGDNGTI
Sbjct: 97 TLFVEKGAVILGSQDPSHWDLVDPLPSYGRGIELPGKRYQSLINGDMLHDVVVTGDNGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+L+E S + +SNLT +N+P++++HPVY S+V+VQ I
Sbjct: 157 DGQGSVWWDWFESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNI 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
++ AP SP T GI PDS N IED I G D +++KSGWD+YGIAY PT + IRR
Sbjct: 217 SVSAPGESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRR 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + +A GSEMSGGI +V E + +S SG+ +T GRGG++K + + + +
Sbjct: 277 VYLQSSSGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVEL 336
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
K AF G GSHPD+N+DP+A+PV+ I + ++ N+TMA G+A PFT +C
Sbjct: 337 KNTNTAFGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLC 396
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+ NV++ + N W C+++ G S V+P+PC L
Sbjct: 397 LFNVSLAIRNTLSP--WTCSNVVGFSESVSPEPCPEL 431
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/437 (46%), Positives = 281/437 (64%), Gaps = 10/437 (2%)
Query: 6 TAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGT 65
A ++ ++LLV I + VES N + +A R HS S+ EFG VGDG
Sbjct: 20 VAHMKSLVAVLLLVAI-----STAVESNGEDNGGPCKQNAFKARPHSVSILEFGAVGDGI 74
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
T NT AF+ A+ +L F +GG+QL+VP GKWLTGSFNLTSH TLFL + A+++ASQD
Sbjct: 75 TLNTVAFENAMFYLKSFADKGGAQLYVPSGKWLTGSFNLTSHLTLFLERGAIIIASQDYS 134
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
W +++ LPSYGRG GRY SLI+G NL+DVVITGDNGTIDGQG +WW F + L
Sbjct: 135 HWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWELFSSNSLN 190
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
Y+RP LIE + S +I ISNLT ++SP+W +HPV+ S+V +Q IT AP P T GI PD
Sbjct: 191 YSRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFPYTSGIVPD 250
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
S IE+ I +G D V +KSGWDQYGIAYG PT + I + S A +A GSEM
Sbjct: 251 SSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGAGLAFGSEM 310
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGGI D+ AE + ++S G+ +KT GRGG+++ +++ ++ + +TG G HP
Sbjct: 311 SGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISMTGYSGFHP 370
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
D+ YD ALP++ +I +++++ N+++A GI PF+ IC+SNVT L+++P W
Sbjct: 371 DDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLSSEPSP-SW 429
Query: 426 NCTDITGISSGVTPKPC 442
C+++ G S V P+PC
Sbjct: 430 FCSNVIGFSEDVIPEPC 446
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/394 (49%), Positives = 272/394 (69%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ AI +L F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 6 RPHSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHL 65
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
T+FL KDAV++ +++ EWP++EPLPSYG+G D G R+ SLI G N+TDVVITG+NG I
Sbjct: 66 TIFLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGII 125
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW FR+ +L Y+RP+L+E + S++I ISNLTL+NSP+W +HPV+ S+V+V +
Sbjct: 126 DGQGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDV 185
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I D +++KSGWD YGI G P + I R
Sbjct: 186 TIRTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISR 245
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + A +A GSEMSGGI D+ + + S G+ KTA GRGG+++DV + + M
Sbjct: 246 VDLQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQM 305
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + A TG + +HPDN++DP ALP+I I ++MV N+++A L GI GDPFT IC
Sbjct: 306 EDVNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNIC 365
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+SN++ L + + W+C++I+G S V P+PC
Sbjct: 366 LSNISFSLADSTQSSSWSCSNISGYSELVFPEPC 399
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/397 (50%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + S+ EFGGVGDG T NT AF A+ + + GG+ L VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AVL A+Q+ + WP+ EPLPSYGRGR+ G RY+S I G L DVVITGD G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYASFIHGDGLHDVVITGDKGII 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG++WW +R L++TRP L+E M+S I ISN+ L NSP WN+HPVY +V++ +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I+AP SPNTDG++PDS TN IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ SPFS IA+GSE SGG+ DV ED + +S G+ IKT +GRGGF++++ V + M
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G HPD ++ ALP + ++ +++ NV +EGI PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
++NV +L W C D+ G + GV P PC L
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/410 (50%), Positives = 279/410 (68%), Gaps = 1/410 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FGG+GDG T NT+AF+AAI + + GG+ L++PPG +LT +FNLTSH
Sbjct: 37 RNDKISIADFGGIGDGRTLNTRAFRAAIYRIQHLRRRGGTLLYIPPGVYLTETFNLTSHM 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L K AV+ A QD WPVI PLPSYGRGR+ GGRY SLI G + DVVITG+NGTI
Sbjct: 97 TLYLAKGAVIKAVQDSSNWPVIAPLPSYGRGRERPGGRYISLIHGDGVHDVVITGENGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG+ WW +R G LKYTRP L+E + S NI ISN+ +NSP WN+HPVY +V+V+ +
Sbjct: 157 DGQGDAWWNMWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYV 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDG++PDS N IED YI +GDD VAVKSGWD+YGIAYG + + IRR
Sbjct: 217 TILAPRDSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRR 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ SPF+ V A+GSE SGG+ +V AE + D G+ IKT +GRGGF+K++ V + M
Sbjct: 277 ISGSSPFAGV-AVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYM 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + I G G HPD+ +DP+ALP++++I +++ NV A + G+ PFTGIC
Sbjct: 336 ENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
+SN+ + +P+ + W C+ ++G +S V+P PC L + NF
Sbjct: 396 LSNINLRGATRPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDGLCSDNF 445
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/410 (49%), Positives = 267/410 (65%), Gaps = 3/410 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + S+ +FGGVGDG T NT AF+ A+ + + GG+ L VP G WLTGSFNLTSH
Sbjct: 41 RPEAISITDFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLTGSFNLTSHM 100
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AVL A+QD + WP++EPLPSYGRGR+ G RY+S I G L DV ITGD G I
Sbjct: 101 TLFLARGAVLKATQDTRRWPLMEPLPSYGRGRELPGARYASFIHGNGLRDVAITGDKGVI 160
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW +R L++TRP L+E M+S I ISN+ L NSP WN+HPVY +V+V +
Sbjct: 161 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 220
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
ILAP SPNTDGI+PDS +N IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 221 MILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 280
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ SPFS IA+GSE SGG++DV ED + DS G+ IKT VGRGG++++V V + M
Sbjct: 281 VRGSSPFSG-IAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRM 339
Query: 349 KTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ + I G G HPD ++ A+P++ + ++ NV LEGI PFT I
Sbjct: 340 SGVRISGVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 399
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECN 457
C+SNV + + W C D+ G + GV P PC L + + C+
Sbjct: 400 CLSNVKL-FGWRKNDAAWRCRDVRGAALGVQPSPCAELATSFASAGSSCS 448
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 270/399 (67%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ ++ F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L + AV++ ++D +W ++EPLPSYG+G D G R+ SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW+ R+ EL ++RP L+E +YS++I ISNLT +NSP+W++HPVY S+V V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I + +++KSGWD+YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +S A +A GSEMSGGI D+ + DS G+ KT+ GRGG+++DV + + M
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQM 339
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + TG+ +HPD+++DP LP I ++ ++M N+++A L GI G PFT IC
Sbjct: 340 ENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAIC 399
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
+SN+ + W+C+D++G S V P+PC L D
Sbjct: 400 LSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTELRD 438
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/397 (50%), Positives = 267/397 (67%), Gaps = 1/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGS NLTSH
Sbjct: 38 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHL 97
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV+L SQD W ++ PLPSYGRG + G RY SLI G NL DVVITGD+G I
Sbjct: 98 TLFLEKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVI 157
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+L+E SQ + +SNLT +N+P++N+HPVY S+V V I
Sbjct: 158 DGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNI 217
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
++ AP SP T GI PDS + IE C I +G D +A+KSGWDQYGIAYG P+K + IRR
Sbjct: 218 SVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRR 277
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + IA GSEMSGGI +V E + +S G++I+T GRGG++K + V + M
Sbjct: 278 VHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEM 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + AF +G +GSHPD+ YDP+ALP++Q+I +++ N+ +A GI PFT I
Sbjct: 338 ENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIY 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN+T + + W C+D++G S V P PC L
Sbjct: 398 LSNITFSINSS-SSTSWICSDVSGFSESVIPPPCSDL 433
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 270/397 (68%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGG GDG T NT AF A+ + R + GG++L+VPPG WLTG FNLTS
Sbjct: 40 RGARVSVASFGGAGDGRTLNTAAFARAVASIERRAAPGGAELYVPPGVWLTGPFNLTSRM 99
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+IEPLPSYGRGR+ GGRY+SLI G L DVVITG+NGTI
Sbjct: 100 TLFLARGAVIRATQDTSSWPLIEPLPSYGRGRELPGGRYTSLIHGNGLQDVVITGENGTI 159
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW ++ L YTRP+L+E+M S +I +SN+ +SP WN+HPVY S+V+++ +
Sbjct: 160 DGQGSAWWDMWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNV 219
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWD+YGIAYG + + +RR
Sbjct: 220 TILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRR 279
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF+ A+GSE SGG+++V AE + +S G+ +KT GRGGF++++ V +T+
Sbjct: 280 ITGSSPFAG-FAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTL 338
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G+HPD++Y+ ALP++ + +++ +NV A ++GI F+ IC
Sbjct: 339 DNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRIC 398
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SNV + T W C ++G + V P PC L
Sbjct: 399 LSNV--KFTGGAPVRPWKCEAVSGGALDVQPSPCTEL 433
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/397 (50%), Positives = 267/397 (67%), Gaps = 1/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ AI +L F +GG+QL+VPPGKWLTGS NLTSH
Sbjct: 33 RPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSINLTSHL 92
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV+L SQD W ++ PLPSYGRG + G RY SLI G NL DVVITGD+G I
Sbjct: 93 TLFLXKGAVILGSQDPSHWELVNPLPSYGRGIEVPGKRYRSLINGYNLQDVVITGDDGVI 152
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+L+E SQ + +SNLT +N+P++N+HPVY S+V V I
Sbjct: 153 DGQGLVWWNWFSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNI 212
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
++ AP SP T GI PDS + IE C I +G D +A+KSGWDQYGIAYG P+K + IRR
Sbjct: 213 SVSAPSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRR 272
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + IA GSEMSGGI +V E + +S G++I+T GRGG++K + V + M
Sbjct: 273 VHLQSSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEM 332
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + AF +G +GSHPD+ YDP+ALP++Q+I +++ N+ +A GI PFT I
Sbjct: 333 ENISTAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIY 392
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN+T + + W C+D++G S V P PC L
Sbjct: 393 LSNITFSINSS-SSTSWICSDVSGFSESVIPPPCSDL 428
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/395 (51%), Positives = 269/395 (68%), Gaps = 2/395 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA SAS+EEFG VGDG TSNT AF+ A+ L GG++L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFLH A++L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW + L +TR +LIE++ S NI ISN+TL NSP W VHPVY +V+++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+LAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI+ G P+ +II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ +P + + GSEMSGGI +V D+ +S VRIKT VGRGG++ ++ + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ +K + H D+ YD ALP I ++ RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
NV+ LT ++ +W+C + G + V P PCE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/392 (49%), Positives = 271/392 (69%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
HS ++ EFG VGDG T NT F+ AI +L F +GG+QL+VP G+WLTGSFNLTSH T+
Sbjct: 41 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 100
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
FL KDAV++ +++ EWP++EPLPSYG+G D G R+ SLI G N+TDVVITG+NG IDG
Sbjct: 101 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVITGNNGIIDG 160
Query: 171 QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
QG WW FR+ +L Y+RP+L+E + S++I ISNLTL+NSP+W +HPV+ S+V+V +TI
Sbjct: 161 QGLTWWNWFRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTI 220
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
+ +P TDGI PDSC+N IED I D +++KSGWD YGI G P + I R+
Sbjct: 221 RTSLDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVD 280
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
+ A +A GSEMSGGI D+ + + S G+ KTA GRGG+++DV + + M+
Sbjct: 281 LQASLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMED 340
Query: 351 MKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICIS 410
+ A TG + +HPDN++DP ALP+I I ++MV N+++A L GI GDPFT IC+S
Sbjct: 341 VNVAIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLS 400
Query: 411 NVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
N++ L + + W+C++I+G S V P+PC
Sbjct: 401 NISFSLADSTQSSSWSCSNISGYSELVFPEPC 432
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/395 (50%), Positives = 269/395 (68%), Gaps = 3/395 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ +L + +GG QL++P G+WLTGS L SH
Sbjct: 1 RPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGSIKLISHL 60
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG-DNGT 167
TLFL +A +L SQD K++P+I LPSYGRGR+ G R+SSLI G L DVVITG DNGT
Sbjct: 61 TLFLENEATILGSQDLKDYPIIPGLPSYGRGRELPGPRHSSLINGEGLEDVVITGSDNGT 120
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQG +WW F L YTR +L+E++ S +I ISNLT +SP W +HPVY +V+V+
Sbjct: 121 IDGQGAVWWDAFYNKTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKD 180
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAP+ SPNTDGI+PDS N IEDCYI G D +A+KSGWD+YG +YGMP+K + +R
Sbjct: 181 MTILAPLDSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVR 240
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
R+T S SA IA GSEMSGGI DV+ + + + G+R KT +GRGG++++V V +
Sbjct: 241 RITVHSKTSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVD 300
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
M ++ A TG+YG HPD N++ PVI+NI+ ++V EN+T A G+ PF I
Sbjct: 301 MHSVGTAIAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNI 360
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
++N+ +++ K + WNC+ + G V P+PC
Sbjct: 361 HLANIALDV--KSESDDWNCSSVAGTYFFVWPQPC 393
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/395 (51%), Positives = 269/395 (68%), Gaps = 2/395 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA SAS+EEFG VGDG TSNT AF+ A+ L GG++L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFLH A++L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW + L +TR +LIE++ S NI ISN+TL NSP W VHPVY +V+++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+LAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI+ G P+ +II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ +P + + GSEMSGGI +V D+ +S VRIKT VGRGG++ ++ + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ +K + H D+ YD ALP I ++ RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
NV+ LT ++ +W+C + G + V P PCE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/462 (45%), Positives = 292/462 (63%), Gaps = 25/462 (5%)
Query: 7 AKRTQV---------ICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEE 57
A++TQ+ + ++LLV I + VES N + +A+ R HS S+ E
Sbjct: 57 AQQTQILVVQWYGTEVAVLLLVAI-----STAVESNGEDNGGPCKQNALKARPHSVSILE 111
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG VGDG T NT AF+ AI +L F +GG+QL+VP G WLTGSFNLT+H TLFL + A
Sbjct: 112 FGAVGDGITLNTVAFENAIFYLKSFADKGGAQLYVPSGTWLTGSFNLTNHLTLFLERGAT 171
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
++ASQD W +++ LPSYGRG GRY SLI+G NL+DVVITGDNGTIDGQG +WW+
Sbjct: 172 IIASQDYSHWDIVDFLPSYGRGI----GRYRSLIYGQNLSDVVITGDNGTIDGQGSIWWK 227
Query: 178 KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
F + L YTRP LIE + S ++ ISNLT ++SP+W +HPVY S+V +Q IT AP P
Sbjct: 228 LFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFP 287
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
T GI PDS N IE+ I +G D + +KSGWDQYGIAYG PT + I + S A
Sbjct: 288 YTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGA 347
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+A GSEMSGGI + AE + ++S G+ +KT GRGG+++ +++ ++ + +
Sbjct: 348 GLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISM 407
Query: 358 TGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
TG G HPD+ YD +LPV+ +I +++++ N+++A GI PF+ IC+SNVT L+
Sbjct: 408 TGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLS 467
Query: 418 NKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFP 459
++P W C+++ G S V P+PC PD Q++ FP
Sbjct: 468 SEPSP-SWFCSNVIGFSEHVIPEPC---PD---IQSSYSKFP 502
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/395 (51%), Positives = 269/395 (68%), Gaps = 2/395 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA SAS+EEFG VGDG TSNT AF+ A+ L GG++L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFLH A++L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DVVITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW + L +TR +LIE++ S NI ISN+TL NSP W VHPVY +V+++ +
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+LAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI+ G P+ +II+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ +P + + GSEMSGGI +V D+ +S VRIKT VGRGG++ ++ + + M
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ +K + H D+ YD ALP I ++ RD+V ++ A LE + G + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
NV+ LT ++ +W+C + G + V P PCE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/409 (49%), Positives = 263/409 (64%), Gaps = 3/409 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FGGVGDG T NT AF+ A+ + + GG+ L VP G WL GSFNLTSH
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AVL A+QD + WP++EPLPSYGRGR+ G RY+S I G L DVVITGD G I
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGVI 165
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQGE+WW +R L++TRP L+E M+S I ISN+ L NSP WN+HPVY +V+V +
Sbjct: 166 DGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNM 225
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
ILAP SPNTDG++PDS +N IED YI +GDD VA+KSGWD+YGIAYG P+ + +RR
Sbjct: 226 MILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRR 285
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ SPFS IA+GSE SGG++DV ED DS G+ IKT VGRGG++++V V + +
Sbjct: 286 VRGSSPFSG-IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRL 344
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ I G G HPD ++ A+P + + ++ NV LEGI PFT IC
Sbjct: 345 TGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRIC 404
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECN 457
+SNV +L W C D+ G + GV P PC L + + C+
Sbjct: 405 LSNV--KLFGWRSDAAWKCRDVRGAALGVQPSPCAELATSFASARSSCS 451
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 271/394 (68%), Gaps = 2/394 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ +FG VGDG T NT AF+ AI +L + + GG+QL++P G WLTGS L SH
Sbjct: 1 RPHSVSITDFGAVGDGKTLNTHAFENAIFYLRSYAANGGAQLYIPVGLWLTGSITLISHL 60
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL A +L S+D ++PVI LPSYGRGR+ G R+SSLI G L DV+ITGDN TI
Sbjct: 61 TLFLENGATILGSEDFFDYPVIPGLPSYGRGRELPGPRFSSLINGNGLEDVIITGDNATI 120
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW FR L YTR +++E++ S+NI ISNLT NSP W +HPVY +V+V+ +
Sbjct: 121 DGQGAVWWSAFRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSL 180
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TIL P +PNTDGI+PDS + IEDCYI GDD +++KSGWDQ+G ++ MP+K + ++R
Sbjct: 181 TILNPFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQR 240
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S SA I+ GSEMSGGI DV+ + + + GVRIKTAVGRGG+V+ + V+ + +
Sbjct: 241 ILAFSRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVL 300
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ A + G+YG HPD N++ A P+I++I +++V EN+ A G+ PF I
Sbjct: 301 HSIRTAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIH 360
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
++N+ +++ N K++ WNC+D+ G V P+PC
Sbjct: 361 LANIALQV-NTTKQI-WNCSDVAGSYIFVFPQPC 392
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/266 (69%), Positives = 225/266 (84%), Gaps = 2/266 (0%)
Query: 182 GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
G+ TRPY+IEIMYS IQISNLTL+NSPSW VHP+YSS +I+QG+TILAPV SPNTDG
Sbjct: 120 GQFTLTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDG 179
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
I+PDSC+NTRIEDCYIVSGDDC+AVKSGWD+YGI GMP++ +IIRRLTCISP SA+IAL
Sbjct: 180 IDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIAL 239
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
GSEMSGGIQD+RAED+TAI+++S VRIKTAVGRG +V++++V M + TMK+ FW+TGSY
Sbjct: 240 GSEMSGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSY 299
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
GSHPD +DP ALP I INYRD++A+NV A+LEGIA DPFTGICISN IE K
Sbjct: 300 GSHPDTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVG--K 357
Query: 422 KLQWNCTDITGISSGVTPKPCELLPD 447
KL WNCTD+ G++S V+P+PC LL +
Sbjct: 358 KLAWNCTDVHGVTSNVSPEPCALLQE 383
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/397 (49%), Positives = 262/397 (65%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + S+ EFGGVGDG T NT AF A+ + + GG+ L VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AVL A+Q+ + WP+ EPLPSYGRGR+ G RY+S I G L D+VITGD G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGII 158
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG++WW +R L++TRP L+E M+S I ISN+ L NSP WN+HPVY +V++ +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I+AP SPNTDG++PDS TN IED YI +GDD VA+KSGWD+YGIAYG P+ + IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ SPFS IA+GSE SGG+ +V ED + +S G+ IKT +GRGGF++++ V + M
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G HPD ++ ALP + ++ +++ NV +EGI PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
++NV +L W C D+ G + GV P PC L
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPCAEL 432
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/401 (49%), Positives = 267/401 (66%), Gaps = 2/401 (0%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
+Y R HS S+ EFG VGDG T NT AF+ A+ +L + +GG QL++P G+WLTGS
Sbjct: 38 KYKNWKNRPHSVSISEFGAVGDGKTLNTHAFENAMFYLRTYADKGGVQLYIPAGRWLTGS 97
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L SH TLFL +A +L SQD ++PVI LPSYGRGR+ G R+ SLI G L DVVI
Sbjct: 98 IKLISHLTLFLENEATILGSQDLNDYPVIPGLPSYGRGRELPGPRHRSLINGEGLEDVVI 157
Query: 162 TGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
TGDNGTIDGQG +WW F+ L YTR +L+E++ S++I ISNLT +SP W +HPVY
Sbjct: 158 TGDNGTIDGQGAVWWNAFQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCR 217
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+V+V+ +T+LAP+ SPNTDGI+PDS IEDCYI GDD +A+KSGWD+YG AYGMP+
Sbjct: 218 NVVVKDMTLLAPLNSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPS 277
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
+ + IRR+ S SA IA GSEMSGGI DV+ + + + G+R KT GRGG+++++
Sbjct: 278 QHIDIRRIVVHSETSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNI 337
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG 401
V + M+++ A TG+YG HPD N++ PVI+N+ ++V E++T A G+
Sbjct: 338 TVDNVNMRSVNTAIAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPE 397
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
PF I ++N I L K + WNC+ + G V P+PC
Sbjct: 398 SPFLNIHLAN--IALDTKSESEDWNCSSVAGTYFFVWPQPC 436
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/412 (49%), Positives = 281/412 (68%), Gaps = 3/412 (0%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
+ R S+ +FGGVGDG T NTKAF+ A+ + + GG+ L++PPG +LT SFNLT
Sbjct: 1 MRLRNDKISIADFGGVGDGKTLNTKAFREAVYRIQHLRRRGGTLLYIPPGVYLTESFNLT 60
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
SH TL+L + AV+ A+QD WP+I PLPSYGRGR+ GGRY S I G L DV+ITG+N
Sbjct: 61 SHMTLYLARGAVIKATQDTGNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLQDVIITGEN 120
Query: 166 GTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GTIDGQG++WW +R L +TRP L+E + S+ I ISN+ NSP WN+HPVYS +V++
Sbjct: 121 GTIDGQGDVWWNMWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVI 180
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+ +TILAP+ SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAYG P+ +
Sbjct: 181 RYVTILAPLDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDIT 240
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
IRR+T SPFS IA+GSE SGG+++V E++ + G+ IKT +GRGGF+K++ V
Sbjct: 241 IRRITGSSPFSG-IAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTD 299
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ M+ ++ I G G HPD++++P+ALPV+ I + + E V ++G+ PFT
Sbjct: 300 VYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFT 359
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECN 457
GIC+SN+ + P+ W C+D++G + V+P PC L P QT C+
Sbjct: 360 GICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPCSELT--SPHQTGSCS 409
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/392 (52%), Positives = 278/392 (70%), Gaps = 2/392 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG TSNT+AF+ AI ++ RF +GGS+L VP G W+TGSFNLTS+FTLFL
Sbjct: 71 SITDFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQ 130
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ A++LASQD EWP+IEPLPSYGRGR+ GGR+ SLI G L++VVITG+NGTIDGQG+
Sbjct: 131 RGALILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGK 190
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L +TR +L+E++ S NI ISNLT NSP W +HPVY S+V+++ +TILAP
Sbjct: 191 MWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAP 250
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGI P+ ++IRR++ +
Sbjct: 251 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTT 310
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
P + + +GSEMSGGI ++ ED+ DS +G+RIK+ GRGG++ +V + M +K
Sbjct: 311 PTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKM 370
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
A + HPD +DP A+P ++ I ++++ N T A L GIAG + G+C+ NVT
Sbjct: 371 AIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVT 430
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
I L P +W+C ++G S+ V P PC L
Sbjct: 431 I-LGLTPSA-KWHCAFVSGFSTSVFPTPCPQL 460
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/392 (52%), Positives = 278/392 (70%), Gaps = 2/392 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+++FGGVGDG TSNT+AF+ A+ ++ F GG+QL VP G+W+TGSFNLTS+FTLFL
Sbjct: 2 SIKDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFLE 61
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ AV+L SQD KEWP+IEPLPSYGRGR+ GGR+ SLI G L +VVITG+NGTIDGQG+
Sbjct: 62 EGAVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGK 121
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L++TR +L+E+M SQ+I ISNLT NSP W +HP+Y S+++V+ +TILAP
Sbjct: 122 MWWELWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAP 181
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGI P+ +IIRR++ +
Sbjct: 182 LNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTT 241
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
P + + +GSEMSGGI +V ED+ DS +GVRIKT GRGG++ ++ + +TM+ +K
Sbjct: 242 PTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKI 301
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
+ HPD +DP A+PV++ ++ ++V+ N T A LEGI PF GIC+ N
Sbjct: 302 PIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKN-- 359
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
I L W C ++G ++ V P PC L
Sbjct: 360 ISLLGVVSSPSWRCEFVSGFANDVFPTPCPQL 391
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/413 (49%), Positives = 272/413 (65%), Gaps = 2/413 (0%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
+SR + F A RA +AS+EEFG VGDG T NT AF+ A+ L GG++L
Sbjct: 73 DSRSRDSCAGFYAGAGPSRAVTASVEEFGAVGDGATPNTAAFRRAVAELEARAGAGGARL 132
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
VPPG+WLTGSFNLTS FTLFLH+ AV+L SQD +EWP+I PLPSYGRGR+ G R+ SL
Sbjct: 133 EVPPGRWLTGSFNLTSRFTLFLHRGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISL 192
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
I G L DVVITG NGTIDGQG +WW + L +TR +LIE++ S NI IS++TL NS
Sbjct: 193 IHGEGLNDVVITGSNGTIDGQGNMWWELWWNRTLNHTRGHLIELVNSTNILISSITLRNS 252
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W VHPVY S+V+++ +TILAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGW
Sbjct: 253 PFWTVHPVYCSNVVMKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGW 312
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
DQYGI+ G P+ ++I+R++ +P + + GSEMSGGI +V D+ +S VR+KT
Sbjct: 313 DQYGISLGKPSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKT 372
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV 390
VGRGG++ ++ + +TM+ +K + H D+NYD ALP I N+ D+V ++
Sbjct: 373 DVGRGGYITNITISNVTMEKVKVPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDL 432
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
A LE + G + IC N ++ + + W+C + G + V P PCE
Sbjct: 433 QRAPMLEAVPGAVYEEICFRNFSLRGIRRQDR--WHCESVYGEAHEVFPAPCE 483
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/400 (49%), Positives = 272/400 (68%), Gaps = 3/400 (0%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R + +L +FGGVGDG T NT+AFK A+ +S+F +GG+QL VPPG+WLT FNLTSH
Sbjct: 68 LRPMAFNLTDFGGVGDGVTLNTEAFKRAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSH 127
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DAV+L DEK WP++ PLPSYG GR+ G RY SLI G +L DVVITG NGT
Sbjct: 128 MTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGT 187
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
I+GQG+ WW+K+R L +TR L++IM+S +I I+N+TL +SP W +HP ++ ++G
Sbjct: 188 INGQGQTWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKG 247
Query: 228 ITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+ ++I
Sbjct: 248 VTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMI 307
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R L S SA I++GSEMSGG+ +V E+I DS GVRIKTA GRG +V+ + R +
Sbjct: 308 RNLVVRSMVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNI 367
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T + ++ + Y HPD+ YDP ALP++++I++ + + V + R+ G P
Sbjct: 368 TFENVRVGIVMKTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRN 427
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ ++++ LT K K + + C + G G + P PCE L
Sbjct: 428 VTFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 466
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/407 (51%), Positives = 281/407 (69%), Gaps = 2/407 (0%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+ + R S+ +FGGVGDG TSNT+ F+ AI ++ F + GGSQL VP G+W+TGSF
Sbjct: 56 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 115
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS+FTLFL + AV+L SQD ++WP+IEPLPSYGRGR+ GGR+ SLI G L +VVIT
Sbjct: 116 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 175
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTIDGQG++WW + L++TR +L+EI S NI ISNLT +NSP W +HPVY S+
Sbjct: 176 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 235
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+++ +TILAP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGIA P+
Sbjct: 236 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 295
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+I+RRL+ +P + + +GSEMSGGI +V ED+ DS +GVRIKT GRGG+V ++
Sbjct: 296 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 355
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ + M+ +K + HPD+ +DP A+P I+ I ++V+ N T A LEGI G
Sbjct: 356 INNIRMERVKVPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 415
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
P+ GIC+ NVT L +W+C ++G + V P C + +E
Sbjct: 416 PYEGICMKNVT--LLGLAPAAKWHCEFVSGFTDAVFPVSCPQMQSNE 460
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/408 (47%), Positives = 268/408 (65%), Gaps = 3/408 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT +F+ AI +L F +GG++L+VPPG+WLTGSFNLTSH
Sbjct: 35 RPHSVSILEFGAVGDGKTLNTISFQNAIFYLKSFADKGGAKLYVPPGRWLTGSFNLTSHL 94
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K AV+L SQD + +IEPLPSYGRG + GGRY SLI G L DVVITGDNGTI
Sbjct: 95 TLFLEKGAVILGSQDPSHYDLIEPLPSYGRGIELPGGRYRSLINGYKLRDVVITGDNGTI 154
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW F + L Y+RP+L+E + S+ I +SNLT +N+P++N+HPVY S+V+VQ +
Sbjct: 155 DGQGSVWWDWFNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNVLVQNM 214
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
++ AP SP T GI PDS N IE+ I G D +++KSGWD+YGIAY T+ + IRR
Sbjct: 215 SLSAPPESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRR 274
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S + IA GSEMSGGI +V E + +S SG+ +T GRGG++K +++ + +
Sbjct: 275 VHLQSSSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVEL 334
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + A G +G HPD+ +DP A+PV+ I +++ N++ A GI PFT +C
Sbjct: 335 ENINLALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLC 394
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTEC 456
+ N+T+ +++ W C+++ G S V P PC L ++ C
Sbjct: 395 LFNITLMVSSSN---SWTCSNVIGYSDSVFPVPCPELKSPYSNSSSAC 439
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/404 (49%), Positives = 267/404 (66%), Gaps = 1/404 (0%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ-LFVPPGKWLT 99
F A R AS+EEFG VGDG T NT AF+ A+ L GG L VPPG+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSFNLTS FTLFLH+ AV+L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG NGTIDGQG +WW +R L +TR +LIE++ S N+ IS++TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
S+V+++ +TILAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI++G
Sbjct: 256 CSNVVMKDLTILAPLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGK 315
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+ ++I+R++ +P + + GSEMSGGI +V D+ +S VR+KT VGRGG++
Sbjct: 316 PSTNIVIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYIT 375
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
++ + + M+ +K + HPD+ YDP ALP I N+ D+V ++ A LE +
Sbjct: 376 NITIASVAMEKVKVPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAV 435
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
G + GIC N + + + +W+C + G + V P PCE
Sbjct: 436 PGAVYEGICFRNFSFRGIRRQQDSRWHCESVYGEAHDVFPAPCE 479
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 278/400 (69%), Gaps = 2/400 (0%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+ + R S+ +FGGVGDG TSNT+ F+ AI ++ F + GGSQL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS+FTLFL + AV+L SQD ++WP+IEPLPSYGRGR+ GGR+ SLI G L +VVIT
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTIDGQG++WW + L++TR +L+EI S NI ISNLT +NSP W +HPVY S+
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+++ +TILAP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGIA P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+I+RRL+ +P + + +GSEMSGGI +V ED+ DS +GVRIKT GRGG+V ++
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ + M+ +K + HPD+ +DP A+P I+ I ++V+ N T A LEGI G
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
P+ GIC+ NVT L +W+C ++G + V P C
Sbjct: 427 PYEGICMKNVT--LLGLAPAAKWHCEFVSGFTDAVFPVSC 464
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 278/405 (68%), Gaps = 1/405 (0%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ R + S+ EFGGVGDG T NTKAF+ AI + EGG+ L+VPPG +LT FNL
Sbjct: 35 ALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGGTLLYVPPGVYLTEPFNL 94
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TL+L AV++A+QD WP+I PLPSYGRGR+ GGRY S I G + DVVITG+
Sbjct: 95 TSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRYMSFIHGDGVQDVVITGE 154
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NGTIDGQG+ WW K+R G L++TRP L+E + S++I ISN+ NSP WN+HPVY S+V+
Sbjct: 155 NGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVV 214
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
V+ +TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAYG P+ +
Sbjct: 215 VRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDI 274
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
IRR+T SPF+ IA+GSE SGG+++V AE I + G+ IKT GRGGF+K++ +
Sbjct: 275 TIRRITGSSPFAG-IAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMS 333
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ M+ + I+G G HPD+ +D +ALP+++ + +++ V A ++G+ PF
Sbjct: 334 HVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPF 393
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
T IC+ ++ + P+ W C+D++G + V+P PC L ++
Sbjct: 394 TDICLYDINLHGVTGPRTPPWKCSDVSGFAHQVSPWPCSELSSNQ 438
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 278/400 (69%), Gaps = 2/400 (0%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+ + R S+ +FGGVGDG TSNT+ F+ AI ++ F + GGSQL VP G+W+TGSF
Sbjct: 67 FREVPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSF 126
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS+FTLFL + AV+L SQD ++WP+IEPLPSYGRGR+ GGR+ SLI G L +VVIT
Sbjct: 127 NLTSNFTLFLEEGAVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVIT 186
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTIDGQG++WW + L++TR +L+EI S NI ISNLT +NSP W +HPVY S+
Sbjct: 187 GQNGTIDGQGKMWWELWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSN 246
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+++ +TILAP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGIA P+
Sbjct: 247 VVIKDVTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSS 306
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+I+RRL+ +P + + +GSEMSGGI +V ED+ DS +GVRIKT GRGG+V ++
Sbjct: 307 NIIVRRLSGTTPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNIT 366
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ + M+ +K + HPD+ +DP A+P I+ I ++V+ N T A LEGI G
Sbjct: 367 INNIRMERVKVPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGA 426
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
P+ GIC+ NVT L +W+C ++G + V P C
Sbjct: 427 PYEGICMKNVT--LLGLAPAAKWHCEFVSGFTDAVFPVSC 464
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/397 (49%), Positives = 269/397 (67%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGG GDG T NT AF AA+ + R ++ GG L+VPPG WLTG FNLTSH
Sbjct: 42 RGEWVSVASFGGAGDGRTLNTAAFAAAVASIERRRAPGGGLLYVPPGVWLTGPFNLTSHM 101
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+I+PLPSYGRGR+ G RY SLI G L DV ITG NGTI
Sbjct: 102 TLFLSRGAVIRATQDTSSWPLIDPLPSYGRGREMPGKRYKSLIHGNGLQDVFITGANGTI 161
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW ++ G L +TRP+L+E+M S ++ +SNL +SP WN+HPVY S+V+++ +
Sbjct: 162 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNL 221
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IEDCYI +GDD VA+KSGWD+YGIAYG P+ + +RR
Sbjct: 222 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRR 281
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF A A+GSE SGG+++V AE + S GV IKT GRGGF+++V V +T+
Sbjct: 282 ITGSSPF-AGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTL 340
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G HPD +Y+ +ALP + ++ +++ +N+ A ++GIA F+ IC
Sbjct: 341 DNVRYGLRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRIC 400
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN I+L W C ++G + + P PC L
Sbjct: 401 LSN--IKLHGSVPVRPWKCESVSGGALDLQPSPCTEL 435
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/417 (49%), Positives = 278/417 (66%), Gaps = 3/417 (0%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y RA +AS+EEFG VGDG TSNT AF+ A+ L GG++L VP G+WLTGSF
Sbjct: 69 YRGAGRRAVTASVEEFGAVGDGVTSNTAAFQRAVAALEERGGGGGARLEVPAGRWLTGSF 128
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTLFLH AV+L SQD +EWP+I PLPSYGRGR+ G R+ SLI G +L DVVIT
Sbjct: 129 NLTSRFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGQDLNDVVIT 188
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G NGTIDGQG +WW + L +TR +LIE++ S N+ ISN+TL NSP W VHPVY +
Sbjct: 189 GSNGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRN 248
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+++ +TILAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI+ G P+
Sbjct: 249 VVIKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSS 308
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+II+R++ +P + + GSEMSGGI +V D+ +S S VR+KT VGRGG++ ++
Sbjct: 309 NIIIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNIT 368
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ +TM+ +K + H D+ YD ALP+I I+ D+V +V A LE + G
Sbjct: 369 IANVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGA 428
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFP 459
+ GIC NV++ ++++W C + G + V P PCE L ++ + ++ C P
Sbjct: 429 VYEGICFRNVSLRAIR--RQVRWQCESVYGEAHEVFPAPCEELRNNG-SSSSWCGLP 482
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/400 (49%), Positives = 267/400 (66%), Gaps = 5/400 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FG VGDG T NTKAF+ A+ +L G+QL +P G+WLTGS NL SH
Sbjct: 19 RPKKVSITDFGAVGDGKTLNTKAFENALQYLHSNADSDGAQLTIPAGRWLTGSINLISHL 78
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL A +L S+D ++P+I LPSYGRGR+ G RYSSLI G NL DV ITG+NGTI
Sbjct: 79 TLFLENGANILGSEDFNDYPIIPELPSYGRGRELPGARYSSLINGDNLEDVTITGENGTI 138
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW+ FR L Y+R +++E++ SQ+I I NLT NSPSW +HPVY +V+++ +
Sbjct: 139 DGQGGVWWKAFRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNL 198
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+L P SPNTDGI+PDS + IEDCYI GDD +++KSGWDQYGI+YGMP+K + IRR
Sbjct: 199 TVLNPNDSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRR 258
Query: 289 LTCISP---FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
+ S A ++ GSEMSGGI +V+ +D+ + GVR KT+ GRGG++K V V
Sbjct: 259 IVSASKTFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHN 318
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ + ++K A +YG HPD+N++ A PVI+NI +++V EN+T A L+G+ PF
Sbjct: 319 LLLHSVKTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFR 378
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
I + TI L + K WNC+ ++G V P+PC L
Sbjct: 379 HIHLK--TIALDVRSTKNVWNCSWVSGSYFFVVPQPCADL 416
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/392 (51%), Positives = 277/392 (70%), Gaps = 2/392 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+E+FGGVGDG TSNT++F+ AI ++ RFQ+ GG+QL +P G WLTGSFNLTS+FTLFLH
Sbjct: 76 SIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFNLTSNFTLFLH 135
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AV+LASQD KEWP+IEPLPSYGRGR+ GGR+ SLI G +++VVITG NGT+DGQG
Sbjct: 136 HGAVILASQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGR 195
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L++TR +L+E++ S N+ ISNLT NSP W +HPVY S+V+V+G+TILAP
Sbjct: 196 MWWELWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAP 255
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IED YI SGDD VA+KSGWD YGI P+ +I+RR++ +
Sbjct: 256 LNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTT 315
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
P + + +GSEMSGGI ++ E++ DS +GVRIK+ GRGG++ +V + + M+ +K
Sbjct: 316 PTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKI 375
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
+ HPD+ +DP A+P ++I ++V+ N T A LEG+ G F G+C N+T
Sbjct: 376 PIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNIT 435
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
L +W C ++G ++ V P PC L
Sbjct: 436 --LHGVALSARWRCEYVSGFATEVFPVPCPEL 465
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/405 (49%), Positives = 269/405 (66%), Gaps = 3/405 (0%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
+ A R +L +FGGVGDG T NTKAF+ A+ +S+F+++GG+QL VPPG WLT
Sbjct: 44 LNWEAPKLRPVVFNLTDFGGVGDGVTLNTKAFERAVSVISKFRNQGGAQLNVPPGFWLTS 103
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
FNLTS TLFL +DAV+LA QDEK WP++ LPSYG GR+ G RYSSLI G NL DVV
Sbjct: 104 PFNLTSRMTLFLARDAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLKDVV 163
Query: 161 ITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
ITG NGTI+GQG+ WW K L YTR L++IMYS +I ISN+TL +SP W +HP
Sbjct: 164 ITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDC 223
Query: 221 SSVIVQGITILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
+V ++ +TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAY
Sbjct: 224 KNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAK 283
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P+K +IIR L S SA I++GSEMSGG+ +V E+I +S +RIKTA GRGG+V+
Sbjct: 284 PSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVR 343
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
+ R +T ++ I Y HPD+ YDP ALP++++I++ ++ E V + R+ G
Sbjct: 344 QITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPVRITGS 403
Query: 400 AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCE 443
P + ++ + +T K K + + C + G G + PKPC
Sbjct: 404 EEIPVRNVTFHDMNVGITYKKKHI-FQCAFVEGRVIGTIFPKPCR 447
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 279/405 (68%), Gaps = 3/405 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG TSNT AF+ A+ HL F +EGG+QL VP G WL+GSFNLTS+FTLFL
Sbjct: 73 SITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLE 132
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ A++L S+D EWP+IEPLPSYGRGR+ GGR+ SLI G NLT+VVITG+NGTIDGQG+
Sbjct: 133 RGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGK 192
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L +TR +LIE+ S NI ISNLTL+NSP W +HPVY S+V+++ +TILAP
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAP 252
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYG+A P+ ++IRR++ +
Sbjct: 253 MNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTT 312
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ + +GSEMSGGI ++ EDI DS +G+RIKT GRGG++ ++ + ++ +K
Sbjct: 313 RTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKV 372
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
+ H D+ +DP ALP ++ I ++V+ N A L G+ G F +C+ NVT
Sbjct: 373 PIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT 432
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
L PK +W C D++G +S V P C L + +C++
Sbjct: 433 --LLGLPKTEKWKCKDVSGYASDVFPLSCPQLL-QKKGSIAQCSY 474
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/400 (48%), Positives = 271/400 (67%), Gaps = 3/400 (0%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R + +L +FGGVGDG T NT+AF+ A+ +S+F +GG+QL VPPG+WLT FNLTSH
Sbjct: 69 LRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSH 128
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DAV+L DEK WP++ PLPSYG GR+ G RY SLI G +L DVVITG NGT
Sbjct: 129 MTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGT 188
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
I+GQG+ WW+K+R L +TR L++IM+S +I I+N+TL +SP W +HP ++ ++G
Sbjct: 189 INGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKG 248
Query: 228 ITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TILAPV +PNTDGI+PDSC + IEDCYI GDD +AVKSGWDQYGI YG P+ ++I
Sbjct: 249 VTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMI 308
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R L S SA I++GSEMSGG+ +V E++ DS GVRIKTA GRG +V+ + R +
Sbjct: 309 RNLVVRSMVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNI 368
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T + ++ + Y HPD+ YDP ALP++++I++ + + V + R+ G P
Sbjct: 369 TFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRN 428
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ ++++ LT K K + + C + G G + P PCE L
Sbjct: 429 VTFKDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 467
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 268/394 (68%), Gaps = 3/394 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSE-GGSQLFVPPGKWLTGSFNLTSHFTLFL 112
+L +FGG+GDG T NT+AF+ A+ +S ++ GG+QL VP G WLT FNLTSH TLFL
Sbjct: 52 NLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFL 111
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+DA +LA+Q E WP+++PLPSYGRGR+ G RY SLI G +L D+VITG NGTIDG G
Sbjct: 112 EEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNG 171
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
WW K + +LK+TR LI+ M+S+ I+IS++TL NSP W VHP +V ++G+TI+A
Sbjct: 172 RKWWEKAKLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIA 231
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P +PNTDGI+PDSC N IE+CYI GDD VAVKSGWDQYGI YG P + IR +
Sbjct: 232 PPDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVN 291
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
+P SA +++GSEMSGGI +V E++ +S+ GVRIKT GRGG+V V+ R +TM+T++
Sbjct: 292 APVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVR 351
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I YG HPD YDP ALPV++ I + + V + AR+ G P G+ I ++
Sbjct: 352 VGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDM 411
Query: 413 TIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ +T K KK + C+ + G G + PKPCE L
Sbjct: 412 NVGVTRK-KKHVFQCSFLQGQVFGTIFPKPCEDL 444
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/400 (48%), Positives = 272/400 (68%), Gaps = 4/400 (1%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R + +L +FGGVGDG T NT+AF+ A+ +S+F +GG+QL VPPG+WLT FNLTSH
Sbjct: 69 LRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLTAPFNLTSH 128
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DAV+L DEK WP++ PLPSYG GR+ G RY SLI G +L DVVITG NGT
Sbjct: 129 MTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDVVITGHNGT 188
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
I+GQG+ WW+K+R L +TR L++IM+S +I I+N+TL +SP W +HP ++ ++G
Sbjct: 189 INGQGQSWWKKYRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKG 248
Query: 228 ITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TILAPV +PNTDGI+PDSC + IEDCYI GDD +AVKSGWDQYGI YG P+ ++I
Sbjct: 249 VTILAPVFGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMI 308
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R L +PF+ I++GSEMSGG+ +V E++ DS GVRIKTA GRG +V+ + R +
Sbjct: 309 RNLVKSTPFAG-ISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNI 367
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T + ++ + Y HPD+ YDP ALP++++I++ + + V + R+ G P
Sbjct: 368 TFENVRVGIVMKTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRN 427
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ ++++ LT K K + + C + G G + P PCE L
Sbjct: 428 VTFKDMSVGLTYKKKHI-FQCAFVQGRVIGTIYPAPCENL 466
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 280/405 (69%), Gaps = 3/405 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG TSNT+AF+ A+ HL F +EGG+QL VP G WL+GSFNLTS+FTLFL
Sbjct: 73 SITDFGGVGDGKTSNTEAFRRAVRHLEGFAAEGGAQLNVPMGTWLSGSFNLTSNFTLFLQ 132
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ AV+L S+D EWP++EPLPSYGRGR+ GGR+ SLI G NLT+VVITG+NGTIDGQG+
Sbjct: 133 RGAVILGSKDLDEWPIVEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGK 192
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + L +TR +LIE+ NI ISNLTL+NSP W +HPVY S+V+++ +TILAP
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAP 252
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDS TN IEDCYI SGDD +AVKSGWDQYG+A P+ ++IRR++ +
Sbjct: 253 INAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTT 312
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ + +GSEMSGGI ++ EDI DS +G+RIKT GRGG++ ++ + ++ +K
Sbjct: 313 RTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKV 372
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
+ H D+ +DP ALP ++ I ++V+ N A L G+ G F +C+ NVT
Sbjct: 373 PIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVT 432
Query: 414 IELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
L P+ +W C D++G +S V P C L + ++C++
Sbjct: 433 --LLGLPQTEKWKCKDVSGYASDVFPLSCPQLL-QKKGSISQCSY 474
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 268/394 (68%), Gaps = 3/394 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSE-GGSQLFVPPGKWLTGSFNLTSHFTLFL 112
+L +FGG+GDG T NT+AF+ A+ +S ++ GG+QL VP G WLT FNLTSH TLFL
Sbjct: 52 NLTDFGGIGDGRTINTRAFERAVAEISSAAAKSGGAQLNVPAGVWLTAPFNLTSHMTLFL 111
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+DA +LA+Q E WP+++PLPSYGRGR+ G RY SLI G +L D+VITG NGTIDG G
Sbjct: 112 EEDATILATQSEDLWPLMQPLPSYGRGRELPGPRYGSLIHGQHLEDIVITGHNGTIDGNG 171
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
WW K + +LK+TR LI++M+S+ I+IS++TL NSP W VHP +V ++G+TI+A
Sbjct: 172 RKWWEKAKRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIA 231
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P +PNTDGI+PDSC N IE CYI GDD VAVKSGWDQYGI YG P + IR +
Sbjct: 232 PPDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVN 291
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
+P SA +++GSEMSGGI +V E++ +S+ GVRIKT GRGG+V V+ R +TM+T++
Sbjct: 292 APVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVR 351
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I YG HPD YDP ALPV++ I + + V + AR+ G P G+ I ++
Sbjct: 352 VGIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDM 411
Query: 413 TIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ +T K KK + C+ + G G + PKPCE L
Sbjct: 412 NVGVTRK-KKHVFQCSFLQGEVFGTIFPKPCEDL 444
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/446 (44%), Positives = 281/446 (63%), Gaps = 4/446 (0%)
Query: 15 IILLVGIIISLNTNGV--ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAF 72
++LV + ++L V + W E + R HS ++ EFG VG+G T NT F
Sbjct: 3 FLVLVDVFLALTLAVVLGSAHSGGGRQWREQAPPGSRPHSVTITEFGAVGNGRTLNTLPF 62
Query: 73 KAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEP 132
+ A+ + F +GG+QL+VP G+WLTGSFNLTSH TLFL + AV++ +++ +WP++EP
Sbjct: 63 QNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEGAVIIGAKESSQWPIVEP 122
Query: 133 LPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLI 192
LPSYG+G D G R+ SLI G N+TDVVITG+NG I+GQG +WW + EL ++RP+L+
Sbjct: 123 LPSYGQGLDLPGPRHLSLINGYNVTDVVITGNNGVINGQGSIWWDWLHSHELNHSRPHLV 182
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
E ++S+ I ISNLT +NSP+W++HPVY S V V +TI +P TDGI PDS +N I
Sbjct: 183 EFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLTDGIVPDSSSNVVI 242
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
ED I D +++KSGWD+YGI+ G P + I R+ + A +A GSEMSGGI D+
Sbjct: 243 EDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAALAFGSEMSGGISDI 302
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A++I S G+ KT GRGG++ +V + + M + A TG++ SHPD ++DP
Sbjct: 303 HADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTGNWSSHPDEDFDPS 362
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432
LPVI I +DMV N+++A L GI GDPFT IC+SNV + W+C++++G
Sbjct: 363 QLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAESAHSSSWSCSNVSG 422
Query: 433 ISSGVTPKPCELLPDHEPAQTTECNF 458
S V P+PC L H P+ + F
Sbjct: 423 YSESVFPEPCSEL--HTPSSNSSMCF 446
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/406 (48%), Positives = 272/406 (66%), Gaps = 3/406 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R +L +FG VGDG T NTKAF+ AI +S+ +++GG QL VP G+WLT FNLTSH
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L QDEK WP++ PLPSYG GR+ G RY SLI G NL DVVITG NGTI
Sbjct: 131 TLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GQG+ WW+K+R L +TR L++IM+S++I ISN+TL +SP W +HP ++ V+ +
Sbjct: 191 SGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNV 250
Query: 229 TILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+K + IR
Sbjct: 251 TILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
+ S SA I++GSEMSGG+ + E++ +S GVRIKTA GRGG+V+D+ R +T
Sbjct: 311 NVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLT 370
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ T++ I Y HPD YDP ALPV+++I++ + + V + R+ G P +
Sbjct: 371 LDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNV 430
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
++++ +T K K + + C + G G + P PC+ L ++ Q
Sbjct: 431 TFKDMSVGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNLDRYDERQ 475
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/414 (48%), Positives = 283/414 (68%), Gaps = 5/414 (1%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
++ + R S+ +FGGVGDG TSNT++F+ AI ++ RF+ +GGSQL +P G WLTGSF
Sbjct: 66 FNNVPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSF 125
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTLFLH AV+L SQD KEWP+IEPLPSYGRGR+ GGR+ SLI + +VVIT
Sbjct: 126 NLTSDFTLFLHHGAVVLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVIT 185
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G+NGT+DGQG +WW + L +TR +L+E+M S+N+ +SNLT NSP W +HPVY S+
Sbjct: 186 GENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSN 245
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+++G+TILAP+ +PNTDGI+PDS TN IED YI SGDD VA+KSGWDQYGIA P+
Sbjct: 246 VVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPST 305
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+I+ R++ +P + + +GSEMSGGI ++ E++ +S +GVRIK+ GRGG++K+V
Sbjct: 306 NIIVSRVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVS 365
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ + M+ +K + HPD+ +DP A+P ++I ++++ N T A LEG+ G
Sbjct: 366 ISNIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGS 425
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTEC 456
F G+C N+T W+C + G ++GV P PC P+ + T+ C
Sbjct: 426 SFEGLCFKNIT--FLGVALSATWHCEYVAGFTNGVFPLPC---PELQNNGTSSC 474
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/406 (48%), Positives = 272/406 (66%), Gaps = 3/406 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R +L +FG VGDG T NTKAF+ AI +S+ +++GG QL VP G+WLT FNLTSH
Sbjct: 71 RPAVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPAGRWLTAPFNLTSHL 130
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L QDEK WP++ PLPSYG GR+ G RY SLI G NL DVVITG NGTI
Sbjct: 131 TLFLDEGAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGHNGTI 190
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GQG+ WW+K+R L +TR L++IM+S++I ISN+TL +SP W +HP ++ ++ +
Sbjct: 191 SGQGKTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNV 250
Query: 229 TILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+K + IR
Sbjct: 251 TILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
+ S SA I++GSEMSGG+ + E++ +S GVRIKTA GRGG+V+D+ R +T
Sbjct: 311 NVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLT 370
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ T++ I Y HPD YDP ALPV+++I++ + + V + R+ G P +
Sbjct: 371 LDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNV 430
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
++++ +T K K + + C + G G + P PC+ L ++ Q
Sbjct: 431 TFKDMSVGITYKKKHI-FQCAFVHGRVIGTIFPAPCDNLDRYDERQ 475
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 266/391 (68%), Gaps = 3/391 (0%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT+AF+ + +S+ +GG QL VPPG+WLT FNLTSH TLFL +
Sbjct: 73 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 132
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
DAV+LA QDEK WP++ LPSYG GR+ G RYSSLI G NL DVVITG NGTI+GQG+
Sbjct: 133 DAVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLVDVVITGHNGTINGQGQT 192
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW K+R L +TR L++I++S NI ISN+TL +SP W +HP +V V+ +TILAPV
Sbjct: 193 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPV 252
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGI YG P+K ++IR L S
Sbjct: 253 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 312
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA I++GSEMSGG+ +V E+I +S +RIKTA GRGG+V+ + + + +K ++
Sbjct: 313 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRV 372
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HP YDP ALP++++I++ ++ + V + R++G P + ++
Sbjct: 373 GIVIKTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 432
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCE 443
+ +T K K + + C + G + G + P PC+
Sbjct: 433 VGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 462
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 275/429 (64%), Gaps = 11/429 (2%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQ-SEGGSQ 89
S A++S W + + R S+ FG GDG T NT AF A+ + R + + GG+
Sbjct: 18 SSAGAQDSCWSGPAPL--RGAWMSVASFGARGDGQTLNTGAFARAVARIERRRGARGGTL 75
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
L+VPPG WLTG FNLTSH TLFL + AV+ A+QD WP+I+PLPSYGRGR+ GGRY S
Sbjct: 76 LYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMS 135
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
LI G L DV ITG+NGTIDGQG LWW ++ L +TRP+L+E+MYS ++ +SN+ +
Sbjct: 136 LIHGNGLQDVFITGENGTIDGQGSLWWDMWKKRTLPFTRPHLLELMYSTDVVVSNVVFQD 195
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN+HPVY S+V++ +T+LAP SPNTDGI+ DS +N IED YI +GDD +++KSG
Sbjct: 196 SPFWNIHPVYCSNVVIANVTVLAPHDSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSG 255
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGIA+G P+ + IRR+T PF+ A+GSE SGG+++V E + G+ IK
Sbjct: 256 WDEYGIAFGRPSSGITIRRITGSGPFAG-FAVGSETSGGVENVLVEHLNLFGMGVGIHIK 314
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
T GRGGF++++ V +T+ ++ I G G HPD +Y+P LPV+ ++ ++++ +N
Sbjct: 315 TNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQN 374
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
+ A + GI F+ IC+SNV +L W C ++G + V P PC E
Sbjct: 375 IRQAGLIRGIRNSVFSNICLSNV--KLYGSASIGPWKCRAVSGAALDVQPSPCT-----E 427
Query: 450 PAQTTECNF 458
A T+E F
Sbjct: 428 LASTSETGF 436
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/401 (51%), Positives = 270/401 (67%), Gaps = 4/401 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS--QLFVPPGKWLTGSFNLTS 106
RA SAS+EEFG VGDG TSNT AF+ A+ L + + G L VPPG+WLTGSFNLTS
Sbjct: 73 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEQRAAAAGGGAMLEVPPGRWLTGSFNLTS 132
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
FTLFLH AV+L SQD +EWP+I PLPSYGRGR+ G R+ SLI G NL DVVITG NG
Sbjct: 133 RFTLFLHHGAVILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGENLDDVVITGSNG 192
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TIDGQG +WW + L +TR +LIE++ S N+ ISN+TL NSP W VHPVY +V+++
Sbjct: 193 TIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIK 252
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TILAP+ +PNTDGI+PDS ++ IEDCYI SGDD VA+KSGWDQYGI+ P+ +II
Sbjct: 253 DLTILAPLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIII 312
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+R++ +P + + +GSEMSGG+ V D+ +S S VRIKT VGRGGFV +V V +
Sbjct: 313 QRVSGTTPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANV 372
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
TM+ +K + H D+ YD ALP I ++ D+V +V A LE + G + G
Sbjct: 373 TMERVKVPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEG 432
Query: 407 ICISNVTIELTNKPKKLQ--WNCTDITGISSGVTPKPCELL 445
IC NV++ L + ++ W C + G + GV P+ CE L
Sbjct: 433 ICFRNVSLRLREEVRRRHAGWQCESVYGEAHGVFPEACEEL 473
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 265/391 (67%), Gaps = 3/391 (0%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT+AF+ + +S+ +GG QL VPPG+WLT FNLTSH TLFL +
Sbjct: 78 LTEFGGVGDGVTLNTEAFERGVGAISKLGDKGGGQLNVPPGRWLTAPFNLTSHMTLFLAR 137
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
D+V+LA QDEK WP++ LPSYG GR+ G RYSSLI G NL DVVITG NGTI+GQG+
Sbjct: 138 DSVILAVQDEKYWPLMPALPSYGYGREHPGPRYSSLIHGQNLRDVVITGHNGTINGQGQT 197
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW K+R L +TR L++I++S NI ISN+TL +SP W +HP +V V+ +TILAPV
Sbjct: 198 WWTKYRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPV 257
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGI YG P+K ++IR L S
Sbjct: 258 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 317
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA I++GSEMSGG+ +V E+I +S +RIKTA GRGG+V+ + + + K ++
Sbjct: 318 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRV 377
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HP YDP ALP++++I++ ++ + V + R++G P + ++
Sbjct: 378 GIVIKTDYNEHPGTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMK 437
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCE 443
I +T K K + + C + G + G + P PC+
Sbjct: 438 IGITYKKKHI-FQCAFVQGQAIGTIFPSPCD 467
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 269/397 (67%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGG GDG T NT AF AA+ ++R ++ GG+ L+VPPG WLTG F+LTSH
Sbjct: 44 RGAWMSIASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHM 103
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+I+PLPSYGRGR+ G RY SLI G L DV ITG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTI 163
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW ++ G L +TRP+L+E+M S N +SNL +SP WN+HPVY S+V+++ +
Sbjct: 164 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNL 223
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWD+YGIAYG P+ + IRR
Sbjct: 224 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRR 283
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF A ++GSE SGG+++V AE + S GV IKT GRGGF++++ V + +
Sbjct: 284 ITGSSPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVIL 342
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G HPD Y+ +ALP++ ++ +++ +N+ A ++GI F+ IC
Sbjct: 343 DNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRIC 402
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN I+L W C ++G + V P PC L
Sbjct: 403 LSN--IKLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 269/397 (67%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGG GDG T NT AF AA+ ++R ++ GG+ L+VPPG WLTG F+LTSH
Sbjct: 44 RGAWMSVASFGGAGDGRTLNTAAFAAAVASIARRRARGGALLYVPPGVWLTGPFSLTSHM 103
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+I+PLPSYGRGR+ G RY SLI G L DV ITG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGKRYISLIHGNGLQDVFITGENGTI 163
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW ++ G L +TRP+L+E+M S N +SNL +SP WN+HPVY S+V+++ +
Sbjct: 164 DGQGSVWWDMWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNL 223
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TILAP SPNTDGI+PDS +N IEDCYI +GDD +A+KSGWD+YGIAYG P+ + IRR
Sbjct: 224 TILAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRR 283
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T SPF A ++GSE SGG+++V AE + S GV IKT GRGGF++++ V + +
Sbjct: 284 ITGSSPF-AGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVIL 342
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+++ I G G HPD Y+ +ALP++ ++ +++ +N+ A ++GI F+ IC
Sbjct: 343 DNVRYGLRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRIC 402
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN I+L W C ++G + V P PC L
Sbjct: 403 LSN--IKLHGSAPVRPWKCQAVSGGALDVQPSPCTEL 437
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/380 (50%), Positives = 263/380 (69%), Gaps = 3/380 (0%)
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
T +T AF+AA+ + R ++ GG+ L+VPPG WLTG FNLTSH TLFL + AV+ A+QD
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
WP+IEPL SYGRGR+ GGRY SLI G L DVVITGDNGTIDGQG WW ++ G L
Sbjct: 116 SWPLIEPLLSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
+TRP+L+E+M S ++ +SN+ +SP WN+HPVY S+V+++ +T+LAP SPNTDGI+PD
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPD 235
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
S +N IEDCYI +GDD +A+KSGWD+YG+AYG P+ + IRR+T SPF+ A+GSE
Sbjct: 236 SSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG-FAVGSET 294
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGG++ V AE + S G+ IKT GRGGF+++V V +T+ ++++ I G G HP
Sbjct: 295 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 354
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
D+ YD +ALPV+ + +++ +N+ A ++GIA F+ IC+SNV +L W
Sbjct: 355 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPW 412
Query: 426 NCTDITGISSGVTPKPCELL 445
C ++G + V P PC L
Sbjct: 413 KCEAVSGAALDVQPSPCTEL 432
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/398 (50%), Positives = 266/398 (66%), Gaps = 4/398 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHL-SRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ +FG VGDG T NTKAF +AID + + S G+ L+VP G +LT SFNLTSH
Sbjct: 41 RNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSH 100
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL+L AV+ A QD ++WP+ +PLPSYGRGR+ G RY S I G L DVVITG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQGE WW +R G LK+TRP LIE S NI +S++ L NSP W +HPVY S+V+V
Sbjct: 161 IDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHH 220
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAP S NTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAY P++ + IR
Sbjct: 221 VTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIR 280
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
R+T SPF+ IA+GSE SGGIQ+V E+IT +S G+ IKT +GRGG ++ + + +
Sbjct: 281 RITGSSPFAG-IAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ ++ I+G G HPD+ ++ ALP+++ I +++ V A ++G+ PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
C SNVT LT + W C+D+ G + V P PC L
Sbjct: 400 CFSNVT--LTGTKRSPIWKCSDVVGAADKVNPTPCPEL 435
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/413 (46%), Positives = 266/413 (64%), Gaps = 8/413 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGGVGDG NT AF A+ + R ++ GG+ L+VP G WLTG FNLTSH
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+I+PLPSYGRGR+ GGRY SLI G L DV ITG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTI 163
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW +R L +TRP+L+E++ S ++ ISN+ +SP WN+HPVY S+V++ +
Sbjct: 164 DGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNV 223
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+LAP SPNTDGI+PDS +N IED YI +GDD +++KSGWD+YGIA+G P+ + IRR
Sbjct: 224 TVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRR 283
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T PF+ A+GSE SGG+++V E + G+ +KT GRGGF++++ V +T+
Sbjct: 284 ITGSGPFAG-FAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTL 342
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ I G G HPD +YDP LPV+ + +++ +N+ A + GI F+ IC
Sbjct: 343 NGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRIC 402
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDN 461
+SNV +L W C ++G + V P PC E T+E +F N
Sbjct: 403 LSNV--KLYGGDSVGPWKCRAVSGGALDVQPSPCA-----ELTSTSEMSFCTN 448
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/413 (46%), Positives = 266/413 (64%), Gaps = 8/413 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGGVGDG NT AF A+ + R ++ GG+ L+VP G WLTG FNLTSH
Sbjct: 44 RGAWISVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+ A+QD WP+I+PLPSYGRGR+ GGRY SLI G L DV ITG+NGTI
Sbjct: 104 TLFLARGAVIRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGDGLQDVFITGENGTI 163
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW +R L +TRP+L+E++ S ++ ISN+ +SP WN+HPVY S+V++ +
Sbjct: 164 DGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNV 223
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+LAP SPNTDGI+PDS +N IED YI +GDD +++KSGWD+YGIA+G P+ + IRR
Sbjct: 224 TVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRR 283
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+T PF+ A+GSE SGG+++V E + G+ +KT GRGGF++++ V +T+
Sbjct: 284 ITGSGPFAG-FAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTL 342
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ I G G HPD +YDP LPV+ + +++ +N+ A + GI F+ IC
Sbjct: 343 NGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRIC 402
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDN 461
+SNV +L W C ++G + V P PC E T+E +F N
Sbjct: 403 LSNV--KLYGGDSVGPWKCRAVSGGALDVQPSPCA-----ELTSTSEMSFCTN 448
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/435 (46%), Positives = 269/435 (61%), Gaps = 10/435 (2%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
QV + LL I+ + G N+ E + R HS S+ EFG VGDG T NT
Sbjct: 2 QVALVWLLAFTILLIRGEG------NNAICKEIFKLDPRPHSVSILEFGAVGDGKTLNTL 55
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF+ AI +L F +GG+QL+VPPGKWLTGSFNLTSH TLFL K A +LAS D W V+
Sbjct: 56 AFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVV 115
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPY 190
PLPSYGRG + G RY SLI G NL DVVITG+NGT DGQG WW G L Y+RP+
Sbjct: 116 SPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLETGSLNYSRPH 175
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+IE + S++I ISNLT +N+PS N+HPVY S + ++ + I V SP G+ PDS N
Sbjct: 176 IIEFVSSKHILISNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGVAPDSSDNV 235
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
IED I G D V++KSGWDQYGI YG PT + IR L+ SP A I+ GSEMSGGI
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFGSEMSGGIS 295
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
DV E + S GV +T GRGG+++++ + + + ++ A G GSHPD+ +D
Sbjct: 296 DVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 355
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
ALPV+ +I R+ ++ +A L GI PFT IC++++ + + W C+++
Sbjct: 356 WDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLHTHSD----SWICSNV 411
Query: 431 TGISSGVTPKPCELL 445
+G S V+P+PC+ L
Sbjct: 412 SGFSDDVSPEPCQEL 426
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/403 (47%), Positives = 262/403 (65%), Gaps = 3/403 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + +L +FG VGDG T NT+AF+ A+ +S+ GG QL VPPGKWLT FNLTSH
Sbjct: 73 RPVAFNLTDFGAVGDGVTLNTEAFERAVSAISKLARRGGGQLNVPPGKWLTAPFNLTSHM 132
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL +DAV+L QDE WP++ PLPSYG GR+ G RY SLI G NL D+VITG NGTI
Sbjct: 133 TLFLAEDAVILGIQDENYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLRDIVITGHNGTI 192
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG+ WW+K+R L +TR L++IM+S +I N+TL NSP W +HP +V ++ +
Sbjct: 193 DGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNV 252
Query: 229 TILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAP+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+ ++IR
Sbjct: 253 TILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIR 312
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
L S SA I++GSEMSGG+ V E++ S VRIKTA GRG +V+++ R +T
Sbjct: 313 NLVVRSMVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLT 372
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ I Y HPD YDP A+P +Q+I++ + + V + R+ G P +
Sbjct: 373 FDDVRVGIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNV 432
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHE 449
++++ LT K K + + C + G G + P PCE L ++
Sbjct: 433 TFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENLDRYD 474
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 259/397 (65%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ +L F +GG+QL+VPPGKWLTGSFNLTSH
Sbjct: 36 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 95
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K A +LAS D W V+ PLPSYGRG + G RY SLI G NL DVVITG+NGT
Sbjct: 96 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 155
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW +G L Y+RP++IE + S++I ISNLT +N+P+ N+HPVY S + ++ +
Sbjct: 156 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 215
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I V SP+ G+ PDS N IED I G D V++KSGWDQYGI YG PT + IR
Sbjct: 216 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 275
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L SP A I+ GSEMSGG+ DV E + S GV +T GRGG+++++ + + +
Sbjct: 276 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 335
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ A G GSHPD+ +D ALPV+ +I R+ ++ +A L GI PFT IC
Sbjct: 336 TSVDTAIVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 395
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
++++ ++ ++ W C++++G S V+P+PC+ L
Sbjct: 396 LADIHLQTRSEE---SWICSNVSGFSDDVSPEPCQEL 429
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/435 (45%), Positives = 273/435 (62%), Gaps = 9/435 (2%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
QV + LL I+ ++ G N+ E + R HS S+ EFG VGDG T NT
Sbjct: 2 QVALVWLLAFTILLISGEG------NNAICKENFKLDPRPHSVSILEFGAVGDGKTLNTI 55
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF+ A+ +L F +GG+QL+VPPGKWLTGSFNLTSH TLFL K A +LAS D W V+
Sbjct: 56 AFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGATILASPDPSHWDVV 115
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPY 190
PLPSYGRG + G RY SLI G NL DVVITG+NGT DGQG WW +G L Y+RP+
Sbjct: 116 SPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTFDGQGAAWWEWLESGSLNYSRPH 175
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+IE + S++I ISNLT +N+P+ N+HPVY S + ++ + I V SP+ G+ PDS N
Sbjct: 176 IIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGVAPDSSDNV 235
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
IED I G D V++KSGWDQYGI YG PT + IR L SP A I+ GSEMSGG+
Sbjct: 236 CIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSEMSGGVS 295
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
DV E + S GV +T GRGG+++++ + + + ++ A G GSHPD+ +D
Sbjct: 296 DVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDKFD 355
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
ALPV+ +I R+ ++ +A L GI PFT IC++++ ++ ++ W C+++
Sbjct: 356 RDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEE---SWICSNV 412
Query: 431 TGISSGVTPKPCELL 445
+G S V+P+PC+ L
Sbjct: 413 SGFSDDVSPEPCQEL 427
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 259/397 (65%), Gaps = 3/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NT AF+ A+ +L F +GG+QL+VPPGKWLTGSFNLTSH
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL K A +LAS D W V+ PLPSYGRG + G RY SLI G NL DVVITG+NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG WW +G L Y+RP++IE + S++I ISNLT +N+P+ N+HPVY S + ++ +
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I V SP+ G+ PDS N IED I G D V++KSGWDQYGI YG PT + IR
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
L SP A I+ GSEMSGG+ DV E + S GV +T GRGG+++++ + + +
Sbjct: 274 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 333
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ A G GSHPD+ +D ALPV+ +I R+ ++ +A L GI PFT IC
Sbjct: 334 TSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 393
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
++++ ++ ++ W C++++G S V+P+PC+ L
Sbjct: 394 LADIHLQTRSEE---SWICSNVSGFSDDVSPEPCQEL 427
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/399 (46%), Positives = 269/399 (67%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ ++ F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 30 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 89
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
T++L + AV++ ++D +WP++EPLPSYG+G D G R+ SLI G NLTDVVITG+NG I
Sbjct: 90 TIYLEQGAVIVGAKDSSQWPIVEPLPSYGQGTDLPGPRHRSLINGYNLTDVVITGNNGVI 149
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW+ + EL ++RP+L+E +YS++I ISNLT +NSP+W++HPVY S+V V +
Sbjct: 150 DGQGLVWWQWLLSHELNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 209
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I + +++KSGWD+YGI++G PT + I R
Sbjct: 210 TIETSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISR 269
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +S A +A GSEMSGGI D+ + DS G+ KT+ GRGG++++V + + M
Sbjct: 270 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQM 329
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ + TG+ +HPD+++D LP I + ++MV N+++A L GI PFT IC
Sbjct: 330 ENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAIC 389
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
+SN+ + W+C++++G S V P+PC L D
Sbjct: 390 LSNLNFSMAADTGSSSWSCSNVSGYSEAVFPEPCTELRD 428
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/409 (46%), Positives = 267/409 (65%), Gaps = 2/409 (0%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
+ R H +L +FG VGDG + NT+ F+ AI + S+GG+QL V PG+WLT FN+TS
Sbjct: 31 NLRPHVFNLTDFGAVGDGYSVNTRCFEDAIAAIKERASDGGAQLIVGPGRWLTAPFNVTS 90
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
H TLFL + A ++A QD WP++ LPSYGRGR+ G RYSSLI G ++ D V+TG NG
Sbjct: 91 HMTLFLSRGATIVAIQDAGLWPILPALPSYGRGRELPGLRYSSLIHGQHVEDFVLTGHNG 150
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
+IDGQG WW + + L+YTR L+E+M+S NI IS++TL NSP W++HP ++V +
Sbjct: 151 SIDGQGGWWWEQHKQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTIS 210
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
G+TILAP+ +PNTDGI+PDSC N +E+CYI GDD VAVKSGWD+YGI Y P + I
Sbjct: 211 GVTILAPLDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTI 270
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R + S SA I++GSEMSGG++ V ED+ S G+RIKT+ GRGG+VK++ + +
Sbjct: 271 RNVIARSQISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNL 330
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T+ ++ + YG HPD ++DP ALPV+ NI++ + +V R+ G P TG
Sbjct: 331 TLIDVRVGIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITG 390
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQTT 454
I I N+ + LT K + + + C + G G V P PC+ L E +QT
Sbjct: 391 IDIRNMNVGLTRKKRNV-FTCDFLQGRVVGKVFPSPCKALIREEASQTA 438
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/407 (46%), Positives = 268/407 (65%), Gaps = 3/407 (0%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R +L +FGGVGD T NT+AF+ AI +S+ +GG QL VP G WLT FNLTSH
Sbjct: 70 LRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSH 129
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DAV+L QDEK WP++ PLPSYG GR+ G RY SLI G NL DVVITG NGT
Sbjct: 130 MTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVITGHNGT 189
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
I+GQG+ WW+K+R L +TR L++IM+S +I ISN+TL +SP W +HP +V ++
Sbjct: 190 INGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKN 249
Query: 228 ITILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TILAP+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYG+AYG P+ ++I
Sbjct: 250 VTILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILI 309
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R L S SA +++GSEMSGG+ +V E++ +S VRIKT+ GRGG+V+ + R +
Sbjct: 310 RNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNL 369
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T ++ I Y HPD+ +DP ALP++++I++ + + V + R+ G P
Sbjct: 370 TFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKK 429
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
+ ++++ +T K K + + C + G G V P PCE L ++ +
Sbjct: 430 VTFRDMSVGITYKKKHI-FQCAYVEGRVIGTVFPAPCENLDRYDEQE 475
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/396 (48%), Positives = 263/396 (66%), Gaps = 3/396 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + +L +FGGVGDG T NT AF+ A+ +S+ + +GG QL VPPG WLT FNLTSH
Sbjct: 60 RPVAFNLTDFGGVGDGVTLNTVAFERAVSAISKLREKGGGQLNVPPGLWLTAPFNLTSHM 119
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL +DAV+L QDEK WP++ LPSYG GR+ G RY SLI G NL DVVITG NGTI
Sbjct: 120 TLFLAQDAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTI 179
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+GQG+ WW K+R L +TR L++IM+S +I I+N+TL +SP W +HP +V ++ +
Sbjct: 180 NGQGQSWWTKYREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNV 239
Query: 229 TILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+K +IIR
Sbjct: 240 TILAPVYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIR 299
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
L S SA I++GSEMSGG+ +V E++ +S +RIKTA GRGG+++ + R +T
Sbjct: 300 NLVVRSNVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLT 359
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ I +Y HPD YDP A PV+ +I++ ++ + V + R+EG +
Sbjct: 360 FNNVRVGIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNV 419
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPC 442
++ + +T K K + + C + G G + P PC
Sbjct: 420 TFQDMNVGITYKKKHI-FQCAFVEGRVIGTIFPAPC 454
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/405 (46%), Positives = 268/405 (66%), Gaps = 3/405 (0%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
R + +L +FGGVGDG T NT+AF+ A+ +S+ +GG QL VPPG+W+T FNLTS
Sbjct: 70 KLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRWVTAPFNLTS 129
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
H TLFL +D+++L +DEK WP++ PLPSYG GR+ G RY SLI G NL DVVITG NG
Sbjct: 130 HMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDVVITGHNG 189
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TI+GQG+ WW+K+R L +TR L++IM+S +I I+N+TL +SP W +HP +V ++
Sbjct: 190 TINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIR 249
Query: 227 GITILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+TILAPV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAY P+ ++
Sbjct: 250 NVTILAPVLEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNIL 309
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
IR L S SA I++GSEMSGG+ ++ E++ S VRIKTA GRGG+V+ + R
Sbjct: 310 IRNLVVRSMVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRN 369
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+T ++ I Y HPD YDP A+PV+++I++ + + V + R+ G P
Sbjct: 370 LTFDNVRVGIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVR 429
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHE 449
+ ++++ LT K K + + C + G G + P PCE L ++
Sbjct: 430 NVTFQDMSVGLTYKKKHI-FQCAFVQGRVIGTIFPAPCENLDRYD 473
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/403 (47%), Positives = 263/403 (65%), Gaps = 3/403 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + +L +FG VGDG T NT+AF+ A+ +S+ GG QL VPPG+WLT FNLTSH
Sbjct: 73 RPVAFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVPPGRWLTAPFNLTSHM 132
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AV+L QDEK WP++ LPSYG GR+ G RY SLI G NL DVVITG NGTI
Sbjct: 133 TLFLAEGAVILGIQDEKYWPLMPALPSYGYGREHPGPRYGSLIHGQNLRDVVITGHNGTI 192
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG+ WW+K+R L +TR L++IM+S +I +N+TL +SP W +HP +V ++ +
Sbjct: 193 DGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNV 252
Query: 229 TILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAP+ +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+ ++IR
Sbjct: 253 TILAPIFEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIR 312
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
L S SA I++GSEMSGG+ +V E++ S VRIKTA GRGG+V+ + R +T
Sbjct: 313 NLVVRSMVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLT 372
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ I Y HPD YDP A+P++ +I++ + + V + R+ G P +
Sbjct: 373 FDNVRVGIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNV 432
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHE 449
++++ LT K K + + C + G G V P PCE L ++
Sbjct: 433 TFWDMSVGLTYKKKHI-FQCAFVQGRVIGTVFPAPCENLDRYD 474
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/401 (46%), Positives = 267/401 (66%), Gaps = 3/401 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +FG VGDG T NT+AF+ AI +S+ ++GG QL VPPG+WLT FNLTS+ TLFL
Sbjct: 70 NLTDFGAVGDGVTVNTEAFERAIYKISKLATKGGGQLNVPPGRWLTAPFNLTSYMTLFLA 129
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
++A +LA QDEK WP++ PLPSYG GR+ G RY S I G NL DVV+TG+NG+I+GQG+
Sbjct: 130 ENAEILALQDEKYWPLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 189
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K+R L +TR L++IM+S +I +N+TL +SP W +HP +V + +TILAP
Sbjct: 190 TWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 249
Query: 234 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWDQYG YG P+K ++IR L
Sbjct: 250 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIR 309
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA I++GSEMSGG+ ++ E+I S GVRIKTA GRGG+V+D+ R +T+ ++
Sbjct: 310 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 369
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y HPD ++P A P+++NINY + + V + R++G P + ++
Sbjct: 370 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 429
Query: 413 TIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
++ +T K K + + C + G G + P PCE L ++ +
Sbjct: 430 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCENLDRYDEQE 469
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 173/242 (71%), Positives = 207/242 (85%)
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TDGINPDSCTN RIEDCYIVSGDDCVAVKSGWD+YGIA+GMPT+QLIIRRLTCISP+SA
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
IALGSEMSGGI+DVRAEDI AI++ESG+RIKTAVGRG ++KD+YV++MTM TMKWAF +
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
G Y SHPDN YDP+ALPVIQNINYRDMVAENV++AAR GIAGD FTGIC++NVT+ +T
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 419 KPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKAN 478
K KK W CTD+ G++SGVTP PC+ LPD P + + C+FP N LP++ + ++ CSY +
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISACDFPANSLPIDEVQLKQCSYSMS 240
Query: 479 YL 480
Y
Sbjct: 241 YF 242
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/406 (49%), Positives = 277/406 (68%), Gaps = 8/406 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAI---DHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
R + SL +FGGVGDG T NTKAF+ AI +HLS Q EGG+ L+VPPG +LT FNLT
Sbjct: 40 RTDNISLTDFGGVGDGHTLNTKAFREAIYRINHLS--QREGGTTLYVPPGVYLTEPFNLT 97
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
SH TL L AV+ A+QD WP+I PLPSYGRGR+ GGRY S I G L DVVITG+N
Sbjct: 98 SHMTLHLAAGAVIKATQDSSNWPLIAPLPSYGRGRERPGGRYMSFIHGDGLQDVVITGEN 157
Query: 166 GTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GTIDGQG++WW +R L++TRP L+E + S++I ISN+ +SP WN+HPVY S+V++
Sbjct: 158 GTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVI 217
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+ TILAP SPNTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAYG + +
Sbjct: 218 RFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNIT 277
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
IRR++ SPF+ IA+GSE SGG++++ AE I + G+ IKT +GRGG++K++ V
Sbjct: 278 IRRVSGSSPFAG-IAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSN 336
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ ++ + I+G G H D+ YD +ALP+++ I ++ V A ++G+ PFT
Sbjct: 337 VYIENARKGIKISGDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFT 396
Query: 406 GICISNVTIELTN--KPKKLQWNCTDITGISSGVTPKPCELLPDHE 449
IC+S++ + N + + W C+D++G++ V+P PC L H+
Sbjct: 397 DICLSDINLHGVNGTRSRTPSWQCSDVSGVALQVSPWPCSELISHQ 442
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/395 (46%), Positives = 255/395 (64%), Gaps = 1/395 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS + +FG VGDG T NT AF+ A+ +L F +GG+QL+VPPG+WLTGSFNLTSH
Sbjct: 37 RPHSVKITDFGAVGDGETLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 96
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL KDAV+LASQD W V + LPSYGRG D G RY SLI G L DVV+TGDNGTI
Sbjct: 97 TLFLEKDAVILASQDPSHWQVADALPSYGRGIDLPGKRYMSLINGDTLHDVVVTGDNGTI 156
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW +F + L+Y+RP+L+E + S N+ +SNLT +N+P++ +H VY S++ + +
Sbjct: 157 DGQGLVWWDRFNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRV 216
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T SP T GI PDS N I+D I G D +++KSGWD+YGI+Y PT + I+
Sbjct: 217 TANTSPESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKN 276
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ + + I+ GSEMSGGI DV D +S SG+ +T GRGG++K++ + + M
Sbjct: 277 VYLGAASGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHM 336
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ AF GS+G+HPD+ +D +A P++ +I D+ EN++ A G PFT I
Sbjct: 337 VNVGTAFLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSIL 396
Query: 409 ISNVTIELTNKPKKLQ-WNCTDITGISSGVTPKPC 442
+SN+++ + N W C+ + G S V P+PC
Sbjct: 397 LSNISLSIKNSDSPADFWQCSYVDGSSEFVVPEPC 431
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/407 (45%), Positives = 264/407 (64%), Gaps = 1/407 (0%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
++S R HS S+ +FG VGDG T NT AF+ A+ +L F +GG+QL+VPPG WLTGSF+L
Sbjct: 35 SLSTRPHSVSITDFGAVGDGKTLNTLAFQNAVFYLMSFADKGGAQLYVPPGNWLTGSFSL 94
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TLFL AV++ASQD W V++PLPSYGRG D G RY SLI G L DVV+TGD
Sbjct: 95 TSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGTDLPGKRYKSLINGNMLHDVVVTGD 154
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NGTIDGQG +WW +F + LKY RP+LIE + S+N+ +SNLT +N+P++ +H +YSS V
Sbjct: 155 NGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVY 214
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
+ I + SP T GI PDS I++ I G D +++KSGWD+YGIAY PT+ +
Sbjct: 215 IHKILAHSSPESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENV 274
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
IR + + I+ GSEMSGGI DV ++ +S +G+ +T GRGG++K++ +
Sbjct: 275 HIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDIS 334
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ M + A GS+GSHPD+ YD +ALP++ +I ++ EN+ +A +L GI PF
Sbjct: 335 NIDMSRIGTAIVANGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPF 394
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
+ + +SN+ + ++ + W C+ + G S V P+PC L + A
Sbjct: 395 SAVALSNIALSTSSG-SSVSWQCSYVYGSSESVIPEPCPELKRDDDA 440
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 246/347 (70%), Gaps = 9/347 (2%)
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
H+ + +AVL Q+ ++WPV++PLPSYGRGR+ GGR+ SLI+G NLTDV+ITG+NG
Sbjct: 227 HYDIVCETNAVLCLLQNSEDWPVVDPLPSYGRGRELPGGRHRSLIYGCNLTDVIITGNNG 286
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TIDGQG +WW KFR L +TRP+L+E++ S + ISN T +NSP W +HPVY S+V VQ
Sbjct: 287 TIDGQGSIWWSKFRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQ 346
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+TI+ P SPNTDGI+PDS N IEDCYI +GDD +++KSGWD+YGI++G P+ + I
Sbjct: 347 NVTIIVPFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISI 406
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
RLT + SA IA+GSEMSGG+ +V AEDI DS+S +RIKT+ GRGG+V++VY+ M
Sbjct: 407 HRLTGRTT-SAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNM 465
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
T+ + A TG YG HPD++YD ALPVI+ I +++ EN+ A ++GI GD F
Sbjct: 466 TLINVDIAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVD 525
Query: 407 ICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE-----LLPDH 448
IC+SN+T+ N K WNC+D+ G S V+P+ CE + PDH
Sbjct: 526 ICLSNITL---NVSKNNPWNCSDVKGYSELVSPESCEQLNERIFPDH 569
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ EFG VGDG T NTKAF+ AI +L+ + +GG++LFVP G+WLTGSF+L SH
Sbjct: 78 RPHSVSITEFGAVGDGITLNTKAFQNAIFYLNSYADKGGAKLFVPAGRWLTGSFDLISHL 137
Query: 109 TLFLHKDAVLLAS 121
TL+L KDAV+L S
Sbjct: 138 TLWLDKDAVILGS 150
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/403 (46%), Positives = 269/403 (66%), Gaps = 3/403 (0%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A R + +L +FGGVGDG T NT+AF+ A++ ++ F GG+QL VPPG+WLTG FNL
Sbjct: 69 APRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETITAFADRGGAQLNVPPGRWLTGPFNL 128
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TLFL + A +L DEK WP++ LPSYG GR+ +G R+ SLI G NL DVVITG
Sbjct: 129 TSHMTLFLAEGAEILGITDEKNWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGY 188
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NG+I+GQGE+WW K R LK TRP L+++M+S++I ++N+TL NSP W+ HP ++V
Sbjct: 189 NGSINGQGEVWWLKHRRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTNVT 248
Query: 225 VQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
V +TIL+P++ +PNTDGI+PDSC + IE+CYI GDD +A+KSGWDQYGIAYG +
Sbjct: 249 VSNVTILSPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSN 308
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
++IR +T S SA I++GSEMSGG+ ++ E++ DS GVRIKTA+GRGG+++++
Sbjct: 309 ILIRNVTVRSLVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISY 368
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+T ++ I Y H D+ YD +A P I I+++ + V + R G P
Sbjct: 369 SNITFDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNYIP 428
Query: 404 FTGICISNVTIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
I ++++ ++ K K + + C+ I G + V PKPCE L
Sbjct: 429 IKDITFQDMSVGISYKKKHI-FQCSYIEGRVIGSVFPKPCENL 470
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/392 (46%), Positives = 268/392 (68%), Gaps = 4/392 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQ-SEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
L++FGGVGDG T NT+AF+ A+ +S+ + + GG QL VPPG+WLT FNLTSH TLFL
Sbjct: 89 LKDFGGVGDGVTLNTEAFERAVISISKLERNSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+D+ +L +DEK WP++ PLPSYG GR+ G RY SLI G NL D+VITG NGTI+GQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K++ L YTR L++IM+S +I I+N+T+ +SP W +HP +V ++ +TILAP
Sbjct: 209 SWWKKYQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 234 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWDQ+GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA +++GSEMSGGI +V E++ +S G+RIKTA GRGG+++++ + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y H D+NYD A P++ ++ + + V + R+ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 413 TIELTNKPKKLQWNCTDITG-ISSGVTPKPCE 443
++ LT K K + + C+ + G + + P+PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/439 (43%), Positives = 266/439 (60%), Gaps = 34/439 (7%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ FGGVGDG NT AF A+ + R ++ GG+ L+VP G WLTG FNLTSH
Sbjct: 44 RGAWMSVASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHM 103
Query: 109 TLFLHKDAVLLASQ--------------------------DEKEWPVIEPLPSYGRGRDT 142
TLFL + AV+ A+Q D WP+I+PLPSYGRGR+
Sbjct: 104 TLFLARGAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGREL 163
Query: 143 EGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQI 202
GGRY SLI G L DV ITG+NGTIDGQG +WW +R L +TRP+L+E++ S ++ I
Sbjct: 164 PGGRYMSLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVII 223
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
SN+ +SP WN+HPVY S+V++ +T+LAP SPNTDGI+PDS +N IED YI +GDD
Sbjct: 224 SNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDD 283
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
+++KSGWD+YGIA+G P+ + IRR+T PF+ A+GSE SGG+++V E +
Sbjct: 284 LISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAG-FAVGSETSGGVENVHVEHLNFFGM 342
Query: 323 ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINY 382
G+ +KT GRGGF++++ V +T+ ++ I G G HPD +YDP LPV+ +
Sbjct: 343 GVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTI 402
Query: 383 RDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPC 442
+++ +N+ A + GI F+ IC+SNV +L W C ++G + V P PC
Sbjct: 403 KNVWGQNIRQAGLVRGIRDSVFSRICLSNV--KLYGGDSVGPWKCRAVSGGALDVQPSPC 460
Query: 443 ELLPDHEPAQTTECNFPDN 461
E T+E +F N
Sbjct: 461 A-----ELTSTSEMSFCTN 474
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/401 (46%), Positives = 265/401 (66%), Gaps = 3/401 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +FG VGDG T NT+AF+ AI +S+ +GG QL VPPG+WLT FNLTS+ TLFL
Sbjct: 67 NLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLS 126
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
++A +LA QDEK W ++ PLPSYG GR+ G RY S I G NL DVV+TG+NG+I+GQG+
Sbjct: 127 ENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 186
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K+R L +TR L++IM+S +I +N+TL +SP W +HP +V + +TILAP
Sbjct: 187 TWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 246
Query: 234 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWDQYG YG P+K ++IR L
Sbjct: 247 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIR 306
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA I++GSEMSGG+ ++ E+I S GVRIKTA GRGG+V+D+ R +T+ ++
Sbjct: 307 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 366
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y HPD ++P A P+++NINY + + V + R++G P + ++
Sbjct: 367 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 426
Query: 413 TIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
++ +T K K + + C + G G + P PC+ L ++ +
Sbjct: 427 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNLDRYDEQE 466
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 263/397 (66%), Gaps = 2/397 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS S+ +FG VG G T N AF+ AI +L F +GG+Q VP GKWLT S N T +
Sbjct: 65 RPHSVSVLDFGAVGHGKTINNVAFQNAIFYLKSFADKGGAQFNVPAGKWLTRSINFTCTY 124
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
T+ L KDAV+LAS+D W V+E LPSYGRG + + GRY SLI G NLTDVVITG+NGTI
Sbjct: 125 TV-LEKDAVILASEDFDHWDVVEALPSYGRGIEAQYGRYRSLISGNNLTDVVITGNNGTI 183
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW KF + L YTRP+L+E + S+N+ ISNLTL+N+P WN+ P Y S+V++Q +
Sbjct: 184 DGQGSIWWEKFNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNL 243
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+ P SP T+GI PDS + IE+ I G D + +KSGWD+YGI+YG PT + IRR
Sbjct: 244 TVYTPQDSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRR 303
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ S A +ALGSEMSGGI DV E + DS G+ +KTA GRGGF+KD+ + + M
Sbjct: 304 VRLQSAAGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVM 363
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
++ TG HPD YDP +LP + I + D+V N+++A G++ PFT IC
Sbjct: 364 DNLQVGIKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSIC 423
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+SN++I +++ W C++I+G S V+P+PC L
Sbjct: 424 LSNISISISSD-PSTPWLCSNISGSSKNVSPEPCPEL 459
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/401 (46%), Positives = 264/401 (65%), Gaps = 3/401 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +FG VGDG T NT+AF+ AI +S+ +GG QL VPPG+WLT FNLTS+ TLFL
Sbjct: 67 NLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLFLS 126
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
++A +LA QDEK W ++ PLPSYG GR+ G RY S I G NL DVV+TG+NG+I+GQG+
Sbjct: 127 ENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQGQ 186
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K+R L +TR L +IM+S +I +N+TL +SP W +HP +V + +TILAP
Sbjct: 187 TWWKKYRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAP 246
Query: 234 V-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
V +PNTDGI+PDSC + IE+ YI GDD +A+KSGWDQYG YG P+K ++IR L
Sbjct: 247 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIR 306
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA I++GSEMSGG+ ++ E+I S GVRIKTA GRGG+V+D+ R +T+ ++
Sbjct: 307 SMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELR 366
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y HPD ++P A P+++NINY + + V + R++G P + ++
Sbjct: 367 VGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDM 426
Query: 413 TIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEPAQ 452
++ +T K K + + C + G G + P PC+ L ++ +
Sbjct: 427 SVGITYKKKHI-FQCAYVEGRVIGTIFPAPCDNLDRYDEQE 466
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/242 (73%), Positives = 205/242 (84%), Gaps = 1/242 (0%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
I+CR HSA L EFGG+GDG TSNTKAFK AIDHL +F ++GG++L VPPGKWLTGSFNLT
Sbjct: 42 INCRKHSALLTEFGGIGDGKTSNTKAFKTAIDHLKQFATDGGAELIVPPGKWLTGSFNLT 101
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
SHFTL++HKDAV+L SQ+E ++P I PLPSYG+GRD GGR+SSLIFGTNLTDVVI G N
Sbjct: 102 SHFTLYIHKDAVILGSQEESDYPHIPPLPSYGKGRDG-GGRFSSLIFGTNLTDVVIIGGN 160
Query: 166 GTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GTI+GQG +WW KF+ +L TRPYLIEIM+S +QISNLTLI+SPSWNVHPVY S VI+
Sbjct: 161 GTINGQGRVWWDKFKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVII 220
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
QG+TILAPV PNTDGINPDSC N +IEDCYIVSGDDC+AVKSGWDQYGI YG + I
Sbjct: 221 QGMTILAPVDVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGAWEGEAI 280
Query: 286 IR 287
R
Sbjct: 281 GR 282
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 176/249 (70%), Positives = 203/249 (81%), Gaps = 1/249 (0%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
EY AI+CR HSA L +FG GDG T NTKAFK+AI +LS+ +GG+QL VPPGKWLTGS
Sbjct: 290 EYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIANLSQVAGDGGAQLIVPPGKWLTGS 349
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
FNLTSHFTLF+HKDAV+L +QDE +P+IE LPSYG GRD GGR++SLIFGTNLTDVVI
Sbjct: 350 FNLTSHFTLFVHKDAVILGAQDEAAYPLIEILPSYGAGRDG-GGRHASLIFGTNLTDVVI 408
Query: 162 TGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
TG NGTI GQG+ WW KFRA +LK TRPYLIEIMYS +QISNL LI+SPSWNVHP YSS
Sbjct: 409 TGGNGTIHGQGQYWWDKFRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSS 468
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+VI+Q +TI+APV SPNTDGINPDS N IEDC+IVSGDDC+AVKSGWDQYGI G
Sbjct: 469 NVIIQWLTIIAPVGSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGR 528
Query: 282 KQLIIRRLT 290
++ +T
Sbjct: 529 IYMVAENVT 537
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCEL 444
MVAENVT +ARL+GI+GDPFTGICISNV I LT KPKKLQWNCT++ G+SS VTP C+L
Sbjct: 531 MVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDL 590
Query: 445 LPDHEPAQTTECNFPDNRLPVENM 468
L H + C FP+++LP+E++
Sbjct: 591 L--HPSKKVFNCPFPEDKLPIEDL 612
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 264/399 (66%), Gaps = 3/399 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + +L +FGGVGDG T NT+AF+ A++ ++ GG QL VPPG+WLT FNLTSH
Sbjct: 74 RPGAYNLTDFGGVGDGRTLNTQAFERAVEAIAALADRGGGQLNVPPGRWLTAPFNLTSHM 133
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + A +L DEK W ++ LPSYG GR+ +G RY SLI G NL DVVITG NG+I
Sbjct: 134 TLFLAEGAEILGITDEKYWTLMPALPSYGYGRERKGPRYGSLIHGQNLKDVVITGYNGSI 193
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+GQGE+WW K R LK TRP L+++M+S +I ++N+TL NSP W+ HP ++V V +
Sbjct: 194 NGQGEVWWLKHRRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVTVSNV 253
Query: 229 TILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
TILAPV+ +PNTDGI+PDSC + IE+CYI GDD +AVKSGWDQYGIAYG P+ ++IR
Sbjct: 254 TILAPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIR 313
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
+ S SA I++GSEMSGG+ +V E++ DS GVRIKTA GRGG+++++ R +T
Sbjct: 314 NVAVRSLVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNIT 373
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ I Y H D+ YD +A P I I+++++ V + R G P +
Sbjct: 374 FDNVRAGIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIPIKDV 433
Query: 408 CISNVTIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
++++ ++ K K + + C+ I G + V PKPCE L
Sbjct: 434 TFQDMSVGISYKKKHI-FQCSYIEGRVIGSVFPKPCENL 471
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/397 (45%), Positives = 256/397 (64%), Gaps = 1/397 (0%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
S R HS + +FG VGDG T NT AF+ A+ +L F +GG+QL+VPPG+WLTGSFNLTS
Sbjct: 35 SERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTS 94
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
H TLFL KDAV+LASQD W V + LPSYGRG D G RY SLI G L DVV+TGDNG
Sbjct: 95 HLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNG 154
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TIDGQG +WW +F + L+Y+RP+L+E + ++N+ +SNLT +N+P++ +H VY ++ +
Sbjct: 155 TIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIH 214
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+T SP T GI PDS N I++ I G D +++KSG D+YG++Y PT + I
Sbjct: 215 RVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQI 274
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R + + + I+ GSEMSGGI DV D +S SG+ +T GRGG++K++ + +
Sbjct: 275 RNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNI 334
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
M + AF GS+G+HPD+ +D +A P++ +I D+V EN++ A G PFT
Sbjct: 335 HMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTS 394
Query: 407 ICISNVTIELTNKPKKL-QWNCTDITGISSGVTPKPC 442
I +SN+++ + N W C+ + G S V P+PC
Sbjct: 395 ILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPC 431
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/397 (45%), Positives = 256/397 (64%), Gaps = 1/397 (0%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
S R HS + +FG VGDG T NT AF+ A+ +L F +GG+QL+VPPG+WLTGSFNLTS
Sbjct: 37 SERPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTS 96
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
H TLFL KDAV+LASQD W V + LPSYGRG D G RY SLI G L DVV+TGDNG
Sbjct: 97 HLTLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNG 156
Query: 167 TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
TIDGQG +WW +F + L+Y+RP+L+E + ++N+ +SNLT +N+P++ +H VY ++ +
Sbjct: 157 TIDGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIH 216
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+T SP T GI PDS N I++ I G D +++KSG D+YG++Y PT + I
Sbjct: 217 RVTANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQI 276
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R + + + I+ GSEMSGGI DV D +S SG+ +T GRGG++K++ + +
Sbjct: 277 RNVYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNI 336
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
M + AF GS+G+HPD+ +D +A P++ +I D+V EN++ A G PFT
Sbjct: 337 HMVNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTS 396
Query: 407 ICISNVTIELTNKPKKL-QWNCTDITGISSGVTPKPC 442
I +SN+++ + N W C+ + G S V P+PC
Sbjct: 397 ILLSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPC 433
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/434 (44%), Positives = 276/434 (63%), Gaps = 6/434 (1%)
Query: 13 ICIILLVGII-ISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
I I+ L +I I N +G + D ++S R HS S+ +FG VGDG T NT A
Sbjct: 6 ILILALTSVIPIYANVHGA----GKICDELGRRSLSTRPHSVSITDFGAVGDGKTLNTLA 61
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
F+ A+ +L F +GG+QL+VPPG WLTGSF+LTSH TLFL AV++ASQD W V++
Sbjct: 62 FQNAVFYLMSFADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVD 121
Query: 132 PLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYL 191
PLPSYGRG D G RY SLI G L DVV+TGDNGTIDGQG +WW +F + LKY RP+L
Sbjct: 122 PLPSYGRGIDLPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHL 181
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
IE + S+N+ +SNLT +N+P+++++ +YSS V + I + SP T GI PDS
Sbjct: 182 IEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVC 241
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
I++ I G D +++KSGWD+YGIAY PT+ + IR + + I+ GSEMSGGI D
Sbjct: 242 IQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISD 301
Query: 312 VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
V ++ S +G+ +T GRGG++K++ + + M + A GS+GSHPD+ YD
Sbjct: 302 VVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDV 361
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
+ALP++ +I ++ EN+ +A +L GI PF+ + +SNV++ +++ + W C+ +
Sbjct: 362 NALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVY 420
Query: 432 GISSGVTPKPCELL 445
G S V P+PC L
Sbjct: 421 GSSESVIPEPCPEL 434
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 268/422 (63%), Gaps = 19/422 (4%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R +L +FGGVGD T NT+AF+ AI +S+ +GG QL VP G WLT FNLTSH
Sbjct: 71 RPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWLTAPFNLTSHM 130
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL +DAV+L QDEK WP++ PLPSYG GR+ G RY SLI G NL DVV+TG NGTI
Sbjct: 131 TLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKDVVVTGHNGTI 190
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+GQG+ WW+K+R L +TR L++IM+S +I ISN+TL +SP W +HP +V ++ +
Sbjct: 191 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNV 250
Query: 229 TILAPV-TSPNTDGIN----------------PDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
TILAP+ +PNTDGI+ P+SC + IEDCYI GDD +A+KSGWD
Sbjct: 251 TILAPIFEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWD 310
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
QYG+AYG P+ ++IR L S SA +++GSEMSGG+ +V E++ +S VRIKT+
Sbjct: 311 QYGVAYGRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTS 370
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
GRGG+V+ + R +T ++ I Y HPD+ +DP ALP++++I++ + + V
Sbjct: 371 PGRGGYVQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVR 430
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELLPDHEP 450
+ R+ G P + ++++ +T K K + + C + G G V P PCE L ++
Sbjct: 431 VPVRIHGSEEIPVKKVTFRDMSVGITYKKKHI-FQCAYVEGRVIGTVFPAPCENLDRYDE 489
Query: 451 AQ 452
+
Sbjct: 490 QE 491
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/392 (46%), Positives = 264/392 (67%), Gaps = 4/392 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS-QLFVPPGKWLTGSFNLTSHFTLFLH 113
L++FGGVGDG T NT+AF+ A+ +S+ G QL VPPG+WLT FNLTSH TLFL
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+D+ +L +DEK WP++ PLPSYG GR+ G RY SLI G NL D+VITG NGTI+GQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K + L YTR L++IM+S +I I+N+T+ +SP W +HP +V ++ +TILAP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 234 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWDQ+GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA +++GSEMSGGI +V E++ +S G+RIKTA GRGG+++++ + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y H D+NYD A P++ ++ + + V + R+ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 413 TIELTNKPKKLQWNCTDITG-ISSGVTPKPCE 443
++ LT K K + + C+ + G + + P+PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/415 (45%), Positives = 264/415 (63%), Gaps = 19/415 (4%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + L +FGGVGDG NT+AF+ A+ ++ GG QL VP G+WLT FNLTSH
Sbjct: 80 RPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAERGGGQLNVPLGRWLTAPFNLTSHM 139
Query: 109 TLFLHKDAVLLA----------------SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIF 152
TLFL + + +L +DE+ WP++ LPSYG GR+ +G R+ SLI
Sbjct: 140 TLFLAEGSEILGIPSFREVQKLVLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIH 199
Query: 153 GTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPS 212
G NL DVVITG NG+I+GQGE+WW K R L TRP L+++M+S++I ++N+TL NSP
Sbjct: 200 GQNLKDVVITGHNGSINGQGEVWWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPF 259
Query: 213 WNVHPVYSSSVIVQGITILAPVTS-PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W+ HP +++ V +TILAP++S PNTDGI+PDSC + IE+CYI GDD +AVKSGWD
Sbjct: 260 WHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWD 319
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
QYGIAYG P++ ++IR + S SA I++GSEMSGGI +V ED+ +S G+RIKTA
Sbjct: 320 QYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTA 379
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
+GRGG++ D+ R +T ++ I Y H D+ YD A P I NI+++++ V
Sbjct: 380 IGRGGYIHDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVR 439
Query: 392 MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
+ R G + P I +++I ++ K K + + C+ I G + V PKPCE L
Sbjct: 440 VPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGRVIGSVFPKPCENL 493
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 259/390 (66%), Gaps = 4/390 (1%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ RA + S+ EF GVG+ T NTK F+ A S +GG+ L+VPPG +LT +F+L
Sbjct: 59 ALGHRADNISITEFVGVGNERTLNTKTFREA---FSTCHXDGGTLLYVPPGVYLTETFHL 115
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TSH TL+L +++A+QD WP+I PLPSYGRGR+ GRY S I G + DVVITG+
Sbjct: 116 TSHRTLYLATGTIIMATQDSSNWPLIAPLPSYGRGRERPAGRYMSFIHGDGVXDVVITGE 175
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NGTIDGQG+ WW K++ L++TRP L+E + S++I ISN+ +SP WN+HP S+V+
Sbjct: 176 NGTIDGQGDEWWNKWKQRTLQFTRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSNVV 235
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
V+ +TILAP SPNTDGI+P S +N IED YI +GDD VA KSGWD+YGI YG P+ +
Sbjct: 236 VRYVTILAPRDSPNTDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDI 295
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
IRR+T SPF+ IA+GSE SGG+++V +E I + G+ IKT GR G++K++ +
Sbjct: 296 TIRRVTGSSPFAG-IAIGSETSGGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMS 354
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ M+ + I+G G HPD+ YDP+ALP+++ + +++ V A ++G++ PF
Sbjct: 355 HVYMEEARKGIRISGDVGDHPDDKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPF 414
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGIS 434
IC ++ + P+ W CTD++G +
Sbjct: 415 RDICQYDINLHGVTGPRTPPWKCTDVSGFA 444
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/394 (46%), Positives = 262/394 (66%), Gaps = 3/394 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG VGDG NT AF+ A++ ++ GG QL VPPG+WLT FNLTSH TLFL
Sbjct: 78 NITDFGAVGDGRAVNTAAFERAVEAIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 137
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ A +L DEK WP++ LPSYG GR+ +G R+ SLI G NL DVVITG NG+I+GQGE
Sbjct: 138 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITGHNGSINGQGE 197
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW K R L TRP L+++M+S++I ++N+TL NSP W++HP ++V V +TI++P
Sbjct: 198 VWWMKHRRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSP 257
Query: 234 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
V+ +PNTDGI+PDSC + IE+CYI GDD +A+KSGWDQYGIAYG P+ ++IR +T
Sbjct: 258 VSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTAR 317
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA I++GSEMSGG+ +V E++ +S GVRIKTA GRGG+++++ R +T ++
Sbjct: 318 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 377
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y H D+ YD A P I +I+++ + + V + R G P I ++
Sbjct: 378 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDM 437
Query: 413 TIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
++ ++ K K + + C+ + G + V PKPCE L
Sbjct: 438 SVGISYKKKHI-FQCSYLEGRVIRPVFPKPCENL 470
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/392 (46%), Positives = 263/392 (67%), Gaps = 4/392 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS-QLFVPPGKWLTGSFNLTSHFTLFLH 113
L++FGGVGDG T NT+AF+ A+ +S+ G QL VPPG+WLT F LTSH TLFL
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFYLTSHMTLFLA 148
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+D+ +L +DEK WP++ PLPSYG GR+ G RY SLI G NL D+VITG NGTI+GQG+
Sbjct: 149 EDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDIVITGHNGTINGQGQ 208
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+K + L YTR L++IM+S +I I+N+T+ +SP W +HP +V ++ +TILAP
Sbjct: 209 SWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 234 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
VT +PNTDGI+PDSC + IEDCYI +GDD +A+KSGWDQ+GIAYG P+ ++IR L
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA +++GSEMSGGI +V E++ +S G+RIKTA GRGG+++++ + +T+ ++
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y H D+NYD A P++ ++ + + V + R+ G P + ++
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDM 448
Query: 413 TIELTNKPKKLQWNCTDITG-ISSGVTPKPCE 443
++ LT K K + + C+ + G + + P+PCE
Sbjct: 449 SVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 479
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/393 (47%), Positives = 254/393 (64%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT+AF AA+ ++ GG +L VP G+WLT FNLTS TLFL
Sbjct: 13 LREFGGVGDGRTLNTEAFVAAVASIAE---RGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 69
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ G RY SLI G +L DV ITG NGTI+GQG+
Sbjct: 70 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 129
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H V + TILAP+
Sbjct: 130 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 189
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD +A+KSGWDQYGIAYG P+ +II +T S
Sbjct: 190 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 249
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ +V E++ DS GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 250 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 309
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+P+I+NI+Y + V + R++G A P + +++
Sbjct: 310 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 369
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ L ++ K + C+ + G G V P PC+ L
Sbjct: 370 VGLVDR-KNHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 187/393 (47%), Positives = 254/393 (64%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT+AF AA+ ++ GG +L VP G+WLT FNLTS TLFL
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIA---ERGGGRLVVPAGRWLTAPFNLTSRMTLFLAA 169
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ G RY SLI G +L DV ITG NGTI+GQG+
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H V + TILAP+
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD +A+KSGWDQYGIAYG P+ +II +T S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ +V E++ DS GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+P+I+NI+Y + V + R++G A P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ L ++ K + C+ + G G V P PC+ L
Sbjct: 470 VGLVDR-KNHVFQCSFVQGQVIGYVFPVPCKNL 501
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/398 (45%), Positives = 255/398 (64%), Gaps = 2/398 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNT-KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ FG GDG T NT +A R + GG+ L+VPPG WLTG FNLTSH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL + A++ A+QD WP+I+PLP YGRGR+ GGRY SLI G L DV ITG+NGT
Sbjct: 100 MTLFLARGAIVRATQDTSSWPLIDPLPXYGRGRELPGGRYMSLIHGHGLQDVFITGENGT 159
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQG +WW ++ L +TRP+L+E+MYS ++ +SNL +SP WN+HPVY S+V++
Sbjct: 160 IDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIAN 219
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+T+LAP SPNTDGI+ DS +N +EDCYI +GDD +++KSGWD+YG+A+G P+ + +R
Sbjct: 220 LTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVR 279
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
R+T PF+ A+GSE SGG++DV AE ++ GV +KT GRGGF+++V V ++T
Sbjct: 280 RITGSGPFAG-FAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVT 338
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ ++ I G G HP +Y+ LPV+ + R++ NV A + GI F+ I
Sbjct: 339 LDGARYGLRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNI 398
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
C+SNV + W C ++G + V P PC L
Sbjct: 399 CLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAEL 436
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 168/241 (69%), Positives = 206/241 (85%), Gaps = 4/241 (1%)
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TDG++PDSCTNTRIED +IVSGDDCVAVKSGWD+YGI+YGMPTKQL+IRRLTCISP+SA+
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
IALGSEMSGGI+DVRAEDITAI++ESG+RIKTA+GRGG+VKD+YVR M M TMKWAFW+
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
G+YGSHPD +YDP A P+I INYRD+VAENVTM A+L+GI G+PFTGICISN TI +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 419 KPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCSYKAN 478
+ KK W C+DI GI+SGVTP+PC +L PA+TT C+FP+ LP+E + + C Y+ +
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGML----PAETTTCHFPERSLPIEEVKFKKCIYRGS 236
Query: 479 Y 479
+
Sbjct: 237 H 237
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/398 (49%), Positives = 261/398 (65%), Gaps = 4/398 (1%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHL-SRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ +FG VGDG T NT AF AID + + S G+ L VP G +LT SFNLTSH
Sbjct: 41 RTEMLSIFDFGAVGDGKTLNTNAFNTAIDRIRNSNNSSQGTLLHVPRGVYLTQSFNLTSH 100
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL+L AV+ A QD +W + +PLPSYGRGR+ G RY S I G L DVVITG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTGKWRLTDPLPSYGRGRERPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQGE WW +R G L++TRP LIE S NI +S++ L NS W +HPVY S+V+V
Sbjct: 161 IDGQGEPWWNMWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHH 220
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+TILAP S NTDGI+PDS +N IED YI +GDD VAVKSGWD+YGIAY +P++ + IR
Sbjct: 221 VTILAPTDSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIR 280
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
R+T SPF+ IA+GSE SGGIQ+V E+IT +S G+ IKT +GRGG ++ + + +
Sbjct: 281 RITGSSPFAG-IAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
++ ++ I+G G HPD+ ++ ALP+++ I +++ V A ++G+ PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
C SNVT LT W C+D+ G +S V P PC L
Sbjct: 400 CFSNVT--LTGTKSTPIWKCSDVVGAASKVNPTPCPEL 435
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 259/394 (65%), Gaps = 3/394 (0%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +FG VGDG NT+AF+ A++ ++ GG QL VPPG+WLT FNLTSH TLFL
Sbjct: 83 NLTDFGAVGDGRAVNTEAFERAVETIAALAERGGGQLNVPPGRWLTAPFNLTSHMTLFLA 142
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ A +L DEK WP++ LPSYG GR+ +G R+ SLI G NL DVVITG NG+I+GQGE
Sbjct: 143 EGAEILGITDEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGE 202
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW K R L TRP L+++M+S++I I+N+TL NSP W++HP ++V V +TIL+P
Sbjct: 203 VWWMKHRRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSP 262
Query: 234 VT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
V+ +PNTDGI+PDS + IE+CYI GDD +A+KSGWDQYGIAYG P+ + IR +
Sbjct: 263 VSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNAR 322
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
S SA I++GSEMSGG+ +V E++ +S GVRIKTA GRGG+++++ R +T ++
Sbjct: 323 SLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVR 382
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
I Y H D+ YD A P I +I+++ + V + R G P I ++
Sbjct: 383 AGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDM 442
Query: 413 TIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
++ ++ K K + + C+ + G + V PKPCE L
Sbjct: 443 SVGISYKKKHI-FQCSYVEGRVVRPVFPKPCENL 475
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 253/393 (64%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT+AF AA+ ++ GG +L VP G+WLT FNLT+ TLFL
Sbjct: 113 LREFGGVGDGRTLNTEAFVAAVASIA---ERGGGRLVVPAGRWLTAPFNLTNRMTLFLAA 169
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ G RY SLI G +L DV ITG NGTI+GQG+
Sbjct: 170 GAEILGVQDERYWPLMSPLPSYGYGREHRGPRYGSLIHGQDLKDVTITGQNGTINGQGQS 229
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H V + TILAP+
Sbjct: 230 WWSKFRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD +A+KSGWDQYGIAYG P+ +II +T S
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ +V E++ DS GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+P+I+NI+Y + V + R++G A P + +++
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMS 469
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ L ++ + + C+ + G G V P PC L
Sbjct: 470 VGLVDRRNHV-FQCSFVQGQVIGYVFPVPCRNL 501
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/410 (45%), Positives = 256/410 (62%), Gaps = 14/410 (3%)
Query: 49 RAHSASLEEFGGVGDGTTSNT-KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ FG GDG T NT +A R + GG+ L+VPPG WLTG FNLTSH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 108 FTLFLHKDAV------------LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTN 155
TLFL + A+ L++ QD WP+I+PLPSYGRGR+ GGRY SLI G
Sbjct: 100 MTLFLARGAIVRATQPCLATIELISEQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHG 159
Query: 156 LTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
L DV ITG+NGTIDGQG +WW ++ L +TRP+L+E+MYS ++ +SNL +SP WN+
Sbjct: 160 LQDVFITGENGTIDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNI 219
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HPVY S+V++ +T+LAP SPNTDGI+ DS +N +EDCYI +GDD +++KSGWD+YG+
Sbjct: 220 HPVYCSNVVIANLTVLAPHDSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGV 279
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
A+G P+ + +RR+T PF+ A+GSE SGG++DV AE ++ GV +KT GRG
Sbjct: 280 AFGRPSSGITVRRITGSGPFAG-FAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRG 338
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAAR 395
GF+++V V ++T+ ++ I G G HP +Y+ LPVI + R++ NV A
Sbjct: 339 GFIRNVTVSQVTLDGARYGLRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGL 398
Query: 396 LEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
+ GI F+ IC+SNV + W C ++G + V P PC L
Sbjct: 399 IRGIRDSVFSNICLSNVKLYGIGSDSIGPWRCRAVSGSALDVQPSPCAEL 448
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 253/393 (64%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFG VGDG T NT AF++AI ++ GG +L VP G+WLT FNLTSH LFL
Sbjct: 105 LREFGAVGDGRTVNTAAFESAIAAIA---ERGGGRLTVPAGRWLTAPFNLTSHMILFLAA 161
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ +G RY SLI G +L DV ITG NGTI+GQG+
Sbjct: 162 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVTITGHNGTINGQGQS 221
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S +I ISN+TL +SP W +H +V + TILAP+
Sbjct: 222 WWVKFRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 281
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD +A+KSGWDQYGIAYG P+ ++I+ + S
Sbjct: 282 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRS 341
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ DV E++ DS GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 342 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRV 401
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+P I NI+Y + V + R++G A P + +++
Sbjct: 402 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMS 461
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
I + +K K + C+ + G G V P PC+ L
Sbjct: 462 IGIVDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 251/393 (63%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFG VGDG T NT AF++AI ++ GG +L VP G+WLT FNLTSH TLFL
Sbjct: 103 LREFGAVGDGRTVNTAAFESAIAAIA---ERGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 159
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ +G RY SLI G +L V ITG NGTI+GQG+
Sbjct: 160 GAEILGIQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKHVTITGHNGTINGQGQS 219
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H +V + TILAP+
Sbjct: 220 WWVKFRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPI 279
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD +A+KSGWDQYGIAYG P+ + I+ + S
Sbjct: 280 AGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRS 339
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ DV E++ DS GVRIKTA GRG +V +V + +T + ++
Sbjct: 340 MVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRV 399
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+P I NI+Y + V + R++G A P + +++
Sbjct: 400 GIVIKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMS 459
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
I + +K K + C+ + G G V P PC+ L
Sbjct: 460 IGIVDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/419 (43%), Positives = 264/419 (63%), Gaps = 31/419 (7%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS-QLFVPPGKWLTGSFNLTSHFTLFLH 113
L++FGGVGDG T NT+AF+ A+ +S+ G QL VPPG+WLT FNLTSH TLFL
Sbjct: 89 LKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTLFLA 148
Query: 114 KDAVLLA---------------------------SQDEKEWPVIEPLPSYGRGRDTEGGR 146
+D+ +L QDEK WP++ PLPSYG GR+ G R
Sbjct: 149 EDSEILGVEEHNLGDFETLRDGCVRLVYLTCHFNCQDEKYWPLMPPLPSYGYGRERPGPR 208
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
Y SLI G NL D+VITG NGTI+GQG+ WW+K + L YTR L++IM+S +I I+N+T
Sbjct: 209 YGSLIHGQNLKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANIT 268
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ +SP W +HP +V ++ +TILAPVT +PNTDGI+PDSC + IEDCYI +GDD +A
Sbjct: 269 MRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIA 328
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSGWDQ+GIAYG P+ ++IR L S SA +++GSEMSGGI +V E++ +S G
Sbjct: 329 IKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRG 388
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDM 385
+RIKTA GRGG+++++ + +T+ ++ I Y H D+NYD A P++ ++ +
Sbjct: 389 IRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGI 448
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG-ISSGVTPKPCE 443
+ V + R+ G P + ++++ LT K K + + C+ + G + + P+PCE
Sbjct: 449 HGQGVRVPVRIHGSEQIPVRNVTFRDMSVGLTYKKKHI-FQCSFVKGRVFGSIFPRPCE 506
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 256/393 (65%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGGVGDG T NT AF+AA+ +S GG +L VP G+WLT FNLTSH TLFL
Sbjct: 117 LREFGGVGDGRTLNTAAFEAAVAAIS---ERGGGRLTVPAGRWLTAPFNLTSHMTLFLAA 173
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ +G RY SLI G +L DV+ITG NGTI+GQG+
Sbjct: 174 GAEILGVQDERYWPLMSPLPSYGYGREHKGPRYGSLIHGQDLKDVIITGHNGTINGQGQS 233
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H +V + G TILAP+
Sbjct: 234 WWIKFRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPI 293
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N IE+CYI GDD VA+KSGWDQYGIAYG P+ + IR + S
Sbjct: 294 VGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRS 353
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ +V E++ S GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 354 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 413
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD +DP A+PV NI+Y + + V + R++G A P + +++
Sbjct: 414 GIVIKTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMS 473
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ + +K K + C+ + G G V P PC+ L
Sbjct: 474 VGILDK-KHHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 177/380 (46%), Positives = 242/380 (63%), Gaps = 29/380 (7%)
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
T +T AF+AA+ + R ++ GG+ L+VPPG WLTG FNLTSH TLFL + AV+ A+QD
Sbjct: 56 TLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVIRATQDTS 115
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK 185
WP+IEPLPSYGRGR+ GGRY SLI G L DVVITGDNGTIDGQG WW ++ G L
Sbjct: 116 SWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLP 175
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
+TRP+L+E+M S ++ +SN+ +SP WN+HPVY SS
Sbjct: 176 FTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSS----------------------- 212
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
N IEDCYI +GDD +A+KSGWD+YG+AYG P+ + IRR+T SPF+ A+GSE
Sbjct: 213 ---NVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG-FAVGSET 268
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGG++ V AE + S G+ IKT GRGGF+++V V +T+ ++++ I G G HP
Sbjct: 269 SGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHP 328
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
D+ YD +ALPV+ + +++ +N+ A ++GIA F+ IC+SNV +L W
Sbjct: 329 DDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPW 386
Query: 426 NCTDITGISSGVTPKPCELL 445
C ++G + V P PC L
Sbjct: 387 KCEAVSGAALDVQPSPCTEL 406
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/393 (46%), Positives = 255/393 (64%), Gaps = 6/393 (1%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFGG+GDG T NT AF+AA+ +S GG +L VP G+WLT FNLTS TLFL
Sbjct: 119 LREFGGIGDGRTLNTAAFEAAVAAIS---ERGGGRLTVPAGRWLTAPFNLTSGMTLFLAS 175
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A +L QDE+ WP++ PLPSYG GR+ +G RY SLI G +L DV +TG NGTI+GQG+
Sbjct: 176 GAEILGIQDERYWPLMPPLPSYGYGREHKGPRYGSLIHGQDLKDVTVTGHNGTINGQGKS 235
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW KFR L +TR L+++M S NI ISN+TL +SP W +H +V + TILAP+
Sbjct: 236 WWTKFRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPI 295
Query: 235 T-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+PDSC N I++CYI GDD VA+KSGWDQYGIAYG P+ + IR +T S
Sbjct: 296 VGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRS 355
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA +++GSEMSGG+ +V E++ S GVRIKTA GRG +V ++ R +T++ ++
Sbjct: 356 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 415
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y HPD ++P A+P++ NI+Y + + V + R++G A P + +++
Sbjct: 416 GIVIKTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMS 475
Query: 414 IELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
+ + +K K + C+ + G G V P PC+ L
Sbjct: 476 VGILDK-KHHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/350 (48%), Positives = 225/350 (64%), Gaps = 3/350 (0%)
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL + AVL A+QD + WP++EPLPSYGRGR+ G RY+S I G L DVVITGD G
Sbjct: 1 MTLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGDRGV 60
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQGE+WW +R L++TRP L+E M+S I ISN+ L NSP WN+HPVY +V+V
Sbjct: 61 IDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTN 120
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ ILAP SPNTDG++PDS +N IED YI +GDD VA+KSGWD+YGIAYG P+ + +R
Sbjct: 121 MMILAPRDSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVR 180
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
R+ SPFS IA+GSE SGG++DV ED DS G+ IKT VGRGG++++V V +
Sbjct: 181 RVRGSSPFSG-IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVR 239
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
+ ++ I G G HPD ++ A+P + + ++ NV LEGI PFT I
Sbjct: 240 LTGVRSGVRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRI 299
Query: 408 CISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECN 457
C+SNV +L W C D+ G + GV P PC L + + C+
Sbjct: 300 CLSNV--KLFGWRSDAAWKCRDVRGAALGVQPSPCAELATSFASARSSCS 347
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARN-SDWFEYSAISCRAHSASLEEFGGVGD 63
K R QVI ++ V ++ L++ ESRK + F+Y AI+CR HSASL +FGGVGD
Sbjct: 6 KDHMRVQVIRLVCAVLLVTLLSSEVAESRKVKTVGTSFKYEAINCRTHSASLTDFGGVGD 65
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G TSNTKAF++AI HLS++ S+GG+QL+VP GKWLTGSF+L SHFTL+L+KDAVLLASQD
Sbjct: 66 GKTSNTKAFQSAISHLSQYASKGGAQLYVPAGKWLTGSFSLISHFTLYLNKDAVLLASQD 125
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
EWP IEPLPSYGRGRD GRY+SLIFGTNLTDV++TG NGTIDGQG WW+KF +
Sbjct: 126 ISEWPAIEPLPSYGRGRDAPAGRYTSLIFGTNLTDVIVTGGNGTIDGQGAFWWQKFHKKK 185
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
LKYTRPYLIE+M+S IQISNLTL+NSPSWN+HPVYSS++I++G+TI+APV SPNTDG
Sbjct: 186 LKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPNTDG 243
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/364 (45%), Positives = 240/364 (65%), Gaps = 1/364 (0%)
Query: 82 FQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD 141
F +GG+QL+VPPG WLTGSF+LTSH TLFL DAV++ASQD W V++PLPSYGRG D
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENDAVIVASQDPSHWEVVDPLPSYGRGID 62
Query: 142 TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQ 201
G RY SLI G L DVV+TGDNGTIDGQG +WW +F + LKY RP+LIE + S+N+
Sbjct: 63 LPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVI 122
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+SNLT +N+P+++++ +YSS V + I + SP T GI PDS I++ I G
Sbjct: 123 VSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGY 182
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
D +++KSGWD+YGIAY PT+ + IR + + I+ GSEMSGGI DV ++
Sbjct: 183 DAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHY 242
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNIN 381
S +G+ +T GRGG++K++ + + M + A GS+GSHPD+ YD +ALP++ +I
Sbjct: 243 SLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIR 302
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKP 441
++ EN+ +A +L GI PF+ + +SNV++ +++ + W C+ + G S V P+P
Sbjct: 303 LSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEP 361
Query: 442 CELL 445
C L
Sbjct: 362 CPEL 365
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 239/364 (65%), Gaps = 1/364 (0%)
Query: 82 FQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD 141
F +GG+QL+VPPG WLTGSF+LTSH TLFL AV++ASQD W V++PLPSYGRG D
Sbjct: 3 FADKGGAQLYVPPGHWLTGSFSLTSHLTLFLENGAVIVASQDPSHWEVVDPLPSYGRGID 62
Query: 142 TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQ 201
G RY SLI G L DVV+TGDNGTIDGQG +WW +F + LKY RP+LIE + S+N+
Sbjct: 63 LPGKRYKSLINGNKLHDVVVTGDNGTIDGQGLVWWDRFTSHSLKYNRPHLIEFLSSENVI 122
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+SNLT +N+P+++++ +YSS V + I + SP T GI PDS I++ I G
Sbjct: 123 VSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPYTIGIVPDSSDYVCIQNSTINVGY 182
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
D +++KSGWD+YGIAY PT+ + IR + + I+ GSEMSGGI DV ++
Sbjct: 183 DAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSEMSGGISDVVVDNAHIHY 242
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNIN 381
S +G+ +T GRGG++K++ + + M + A GS+GSHPD+ YD +ALP++ +I
Sbjct: 243 SLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIR 302
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKP 441
++ EN+ +A +L GI PF+ + +SNV++ +++ + W C+ + G S V P+P
Sbjct: 303 LSNISGENIGIAGKLFGIKESPFSSVTLSNVSLSMSSG-SSVSWQCSYVYGSSESVIPEP 361
Query: 442 CELL 445
C L
Sbjct: 362 CPEL 365
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/401 (42%), Positives = 248/401 (61%), Gaps = 9/401 (2%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
+ R+ S ++ ++G VGD T NT F + + + G ++++PPG +++G+FNLT
Sbjct: 49 LPVRSKSFNIVDYGAVGDNVTVNTAVFNKIV---ALVAANGDGEIYIPPGIFVSGTFNLT 105
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG-GRYSSLIFGTNLTDVVITGD 164
SH TL L AVL S + + +I LPSYGRGR+TE RYSSL+ G NL DVVIT D
Sbjct: 106 SHVTLRLASGAVLAGSPNFADHEIIPALPSYGRGRETESIFRYSSLVHGENLDDVVITSD 165
Query: 165 NG--TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
NG IDG G WW RA L YTR +L+E+MY+ +I + N+ L NSP W +HP S++
Sbjct: 166 NGQGVIDGNGMGWWAAHRASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTN 225
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V+V +TI P+ SPNTDG +PDSC I++C GDDC+AVKSGWD GI YG+PT
Sbjct: 226 VLVSNVTINNPLDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTT 285
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
++IR +T +P SA IA+GSEMSGG+ ++ A+DI A + SG+R+K+A GRGG+++++
Sbjct: 286 DVVIRNMTMHTPTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLT 345
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+T+ +K A I YG H YDP A+P+I +I ++V +T+ +G+
Sbjct: 346 FDGVTLNDVKTALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDA 405
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
T + ISNV++ + + C+ TG V P C+
Sbjct: 406 KITNVAISNVSLAVVGSGS---YTCSYATGTQHAVVPVLCD 443
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/206 (77%), Positives = 187/206 (90%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
YSA++CRAHS SL++FGGVGDG TSNTKAFK+AI HLS+ SEGGSQL+VP GKWLTGSF
Sbjct: 1 YSALNCRAHSVSLKDFGGVGDGKTSNTKAFKSAISHLSQNASEGGSQLYVPAGKWLTGSF 60
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+L SHFTL+LHKDAVLLASQD EWPVI+PLPSYGRGRD GR++SLIFGTNLTDV++T
Sbjct: 61 SLISHFTLYLHKDAVLLASQDINEWPVIKPLPSYGRGRDAAAGRHTSLIFGTNLTDVIVT 120
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
GDNGTIDGQG WW++F +LKYTRPYLIE+M+S NIQISNLTL++SPSWN+HPVYSS+
Sbjct: 121 GDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSN 180
Query: 223 VIVQGITILAPVTSPNTDGINPDSCT 248
+I++GITI+AP+ SPNTDGINPDSCT
Sbjct: 181 IIIKGITIIAPIRSPNTDGINPDSCT 206
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 223/336 (66%), Gaps = 3/336 (0%)
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L + + +A DEK WP++ PLPSYG GR+ G RY SLI G NL DVVITG NGTI+GQ
Sbjct: 204 LWRCLIHIADPDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQNLKDVVITGHNGTINGQ 263
Query: 172 GELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
G+ WW+KFR L YTR L++IM+S +I I+++TL +SP W +HP ++ ++G+TIL
Sbjct: 264 GQAWWKKFRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTIL 323
Query: 232 APV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
APV +PNTDGI+PDSC + IEDCYI GDD +A+KSGWDQYGIAYG P+ ++IR L
Sbjct: 324 APVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLV 383
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
S SA I++GSEMSGGI +V E++ DS GVRIKTA GRGG+V+ + R +T +
Sbjct: 384 VRSMVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFEN 443
Query: 351 MKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICIS 410
++ + Y HPD+ YDP ALPVI++I++ ++ V + R+ G P +
Sbjct: 444 VRVGIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFR 503
Query: 411 NVTIELTNKPKKLQWNCTDITGISSG-VTPKPCELL 445
++++ LT K K + + C + G G + P PCE L
Sbjct: 504 DMSVGLTYKKKHI-FQCAFVHGRVIGTIFPSPCENL 538
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +FGGVGDG T NT+AF+ A+ +S+F +GG+QL VPPG+WLT FNLTSH TLFL
Sbjct: 75 NLTDFGGVGDGVTLNTEAFERAVSAISKFGKKGGAQLNVPPGRWLTAPFNLTSHITLFLA 134
Query: 114 KDAVLLASQDEKEW 127
+DAV+LA D + W
Sbjct: 135 QDAVILAI-DRENW 147
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 235/393 (59%), Gaps = 10/393 (2%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L FG +GDG +N+ A AA++ + Q GG +++PPG +L FN+TSH L+L
Sbjct: 75 NLTAFGAIGDGRHNNSLAMAAALEAV---QQSGGGTIYIPPGDFLLAPFNMTSHLVLYLE 131
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
++L A+ +WP+I P+PSYG+GRD G R++S + G NLTDV +TG+NGTI+ G+
Sbjct: 132 AGSILRATDRLADWPIIPPMPSYGQGRDHPGPRHASFLHGFNLTDVTVTGNNGTINATGD 191
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW + G YTR +L E+M+S+ +++S+LTL +SP W VHPVYS +TIL P
Sbjct: 192 IWWARHNNGTEVYTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNP 251
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
SPNTDG++PDS + I DCY +GDD VA+KSGWD YG + + + I S
Sbjct: 252 PYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHS 311
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-TMK 352
P +A I LGSEMSGGI +V A +IT G RIKT +GRGG+V +V V + ++ +++
Sbjct: 312 PNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQ 371
Query: 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
A G YG HP Y+P A P + NI+ + N T A L G+ F + NV
Sbjct: 372 LAVGYNGHYGGHPA-GYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNV 430
Query: 413 TIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
I K W C+DI+G + VTP C L
Sbjct: 431 HIT-----GKQGWTCSDISGTAQNVTPAACPSL 458
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 172 GELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
G +WW +FR L YTRP+L+E+M S + ISNLT +NSP W +HP+Y S VIVQ +TI
Sbjct: 1 GSMWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIR 60
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
AP+ SPNTDGI+PDS + IEDCYI +GDD +A+KSGWD+YGI+YG P+K +IIRRL
Sbjct: 61 APLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIG 120
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
S+ IA+GSEMSGG+ DV AEDI +S +G+RIKT+ GRGG+V+++++ +++ +
Sbjct: 121 -ETHSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANV 179
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
K A TG YG HPD +YDP A+P I+ I ++D+ EN+T+A +EGI GD F IC+ N
Sbjct: 180 KVAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYN 239
Query: 412 VTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDH-EPAQTTECNFPDNRLPVENMGV 470
+T+ + + WNC+++ G SS V P+ CELL + P TEC + N G
Sbjct: 240 ITLSVNSISP---WNCSNVQGFSSLVFPQTCELLEESIFPDHCTECYHLLQEHRIRNKGA 296
Query: 471 QMCSY 475
++ S+
Sbjct: 297 RLLSW 301
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 223/333 (66%), Gaps = 5/333 (1%)
Query: 117 VLLA--SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
VLL+ +DE+ WP++ LPSYG GR+ +G R+ SLI G NL DVVITG NG+I+GQGE+
Sbjct: 106 VLLSGFDRDERYWPLMPALPSYGYGRERKGPRFGSLIHGQNLKDVVITGHNGSINGQGEV 165
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WW K R L TRP L+++M+S++I ++N+TL NSP W+ HP +++ V +TILAP+
Sbjct: 166 WWMKHRRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPI 225
Query: 235 TS-PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+S PNTDGI+PDSC + IE+CYI GDD +AVKSGWDQYGIAYG P++ ++IR + S
Sbjct: 226 SSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARS 285
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
SA I++GSEMSGGI +V ED+ +S G+RIKTA+GRGG+++D+ R +T ++
Sbjct: 286 LVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRA 345
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I Y H D+ YD A P I NI+++++ V + R G + P I +++
Sbjct: 346 GIVIKVDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMS 405
Query: 414 IELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
I ++ K K + + C+ I G + V PKPCE L
Sbjct: 406 IGISYKKKHI-FQCSFIEGRVIGSVFPKPCENL 437
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 200/285 (70%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ ++ F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L + AV++ ++D +W ++EPLPSYG+G D G R+ SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW+ R+ EL ++RP L+E +YS++I ISNLT +NSP+W++HPVY S+V V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I + +++KSGWD+YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333
+ +S A +A GSEMSGGI D+ + DS G + VG
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGPPEEVLVG 324
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 196/274 (71%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R HS ++ EFG VGDG T NT F+ A+ ++ F +GG+QL+VP G+WLTGSFNLTSH
Sbjct: 40 RPHSVTITEFGAVGDGRTLNTVPFQNAVFYVRSFADKGGAQLYVPRGRWLTGSFNLTSHL 99
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TL+L + AV++ ++D +W ++EPLPSYG+G D G R+ SLI G NLTDVVITG+NG I
Sbjct: 100 TLYLEEGAVIVGAKDSSQWLIVEPLPSYGQGLDLPGPRHQSLISGYNLTDVVITGNNGVI 159
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
DGQG +WW+ R+ EL ++RP L+E +YS++I ISNLT +NSP+W++HPVY S+V V +
Sbjct: 160 DGQGLVWWQWLRSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNV 219
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI + +P TDGI PDSC+N IED I + +++KSGWD+YGI++G PT + I R
Sbjct: 220 TIKTSLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISR 279
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
+ +S A +A GSEMSGGI D+ + DS
Sbjct: 280 VDLLSSSGAALAFGSEMSGGISDIHVNHLRIHDS 313
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 174/209 (83%)
Query: 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA 181
+D K WP+I PLPSYGRGRD G RYS+ I G+NLTDV+ITG NGTI+G+G++WW KF A
Sbjct: 24 KDMKHWPLIAPLPSYGRGRDEPGARYSNFIGGSNLTDVIITGKNGTINGKGQVWWDKFHA 83
Query: 182 GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
ELK+ R +L+E++YS+NI ISN+T +N+P WN+HP Y ++V + G+TILAPV SPNTDG
Sbjct: 84 KELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPNTDG 143
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
I+P S + +IEDCYIVSGDDCVAVKSGWD+YGI + MP++ ++I+RLT +SP SA+IAL
Sbjct: 144 IDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAMIAL 203
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKT 330
SEMSGGI+DVRA+D AI++ES +R+KT
Sbjct: 204 SSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/297 (47%), Positives = 201/297 (67%), Gaps = 3/297 (1%)
Query: 149 SLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
SLI G L DVVITGDNGTIDGQG WW ++ G L +TRP+L+E+M S ++ +SN+
Sbjct: 2 SLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHLLELMNSSDVVVSNVVFQ 61
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP WN+HPVY S+V+++ +T+LAP SPNTDGI+PDS +N IEDCYI +GDD +A+KS
Sbjct: 62 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 121
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
GWD+YG+AYG P+ + IRR+T SPF+ A+GSE SGG++ V AE + S G+ I
Sbjct: 122 GWDEYGMAYGRPSSHITIRRITGSSPFAG-FAVGSETSGGVEHVLAEHLNFFSSGFGIHI 180
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
KT GRGGF+++V V +T+ ++++ I G G HPD+ YD +ALPV+ + +++ +
Sbjct: 181 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 240
Query: 389 NVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
N+ A ++GIA F+ IC+SNV +L W C ++G + V P PC L
Sbjct: 241 NIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPWKCEAVSGAALDVQPSPCTEL 295
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 241/410 (58%), Gaps = 26/410 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG TSNT AF+ A+ HL F +EGG+QL VP G WL+GSFNLTS+FTLFL
Sbjct: 73 SITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLE 132
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI----- 168
+ A++L S+D EWP+IEPLPSYGRGR+ GGR+ SLI G NLT+VVIT
Sbjct: 133 RGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITVSVLRFSVMIK 192
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+ G+L R G T + I + I +++ TLI S S S+++ G
Sbjct: 193 EKMGQLMDRGKCGGSYGGTEHWCIR----EAILLNSRTLIISSSLTSL----CSILLSGQ 244
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+IL DS TN IEDCYI SGDD VAVKSGWDQYG+A P+ ++IRR
Sbjct: 245 SIL----------FIADSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRR 294
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ + + + +GSEMSGGI ++ EDI DS +G+RIKT GRGG++ ++ + +
Sbjct: 295 ISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLL 354
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ +K + H D+ +DP ALP ++ I ++V+ N A L G+ G F +C
Sbjct: 355 EKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVC 414
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNF 458
+ NVT L PK +W C D++G +S V P C L + +C++
Sbjct: 415 LRNVT--LLGLPKTEKWKCKDVSGYASDVFPLSCPQLL-QKKGSIAQCSY 461
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/289 (47%), Positives = 193/289 (66%), Gaps = 2/289 (0%)
Query: 159 VVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
VV +G+NGTIDGQG++WW + L +TR +L+E++ S NI ISNLT NSP W +HPV
Sbjct: 36 VVFSGENGTIDGQGKMWWELWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPV 95
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
Y S+V+++ +TILAP+ +PNTDGI+PDS TN IEDCYI SGDD VAVKSGWDQYGI
Sbjct: 96 YCSNVVIKDMTILAPLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLA 155
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
P+ ++IRR++ +P + + +GSEMSGGI ++ ED+ DS +G+RIK+ GRGG++
Sbjct: 156 RPSSNIVIRRVSGTTPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYI 215
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398
+V + M +K A + HPD +DP A+P ++ I ++++ N T A L G
Sbjct: 216 ANVSITNFVMNRVKMAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYG 275
Query: 399 IAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
IAG + G+C+ NVTI L P +W+C ++G S+ V P PC L +
Sbjct: 276 IAGTSYDGVCMKNVTI-LGLTPSA-KWHCAFVSGFSTSVFPTPCPQLQN 322
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 223/407 (54%), Gaps = 32/407 (7%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL--------TSHFTLFLHKD 115
G +T AF+ AID + +S GG +L +P GSFNL TSH LFL K+
Sbjct: 23 GRRDDTAAFEQAIDII---RSNGGGRLIIPGAP--DGSFNLYRIRPINLTSHLVLFLQKN 77
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN---GTIDGQG 172
AV+ A DE WP+I PLPSYG+GRD G RYSSL+ G LT++ I G+ G IDGQG
Sbjct: 78 AVITAIADESVWPLIPPLPSYGQGRDHVGPRYSSLLHGEYLTNITIRGEPDSPGIIDGQG 137
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
WW + R +YTR +L+E MYS I++ NL L NSP W H V VQ + + A
Sbjct: 138 RYWWDRRRHNRDRYTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKA 197
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P +SPNTDG +PDS N IED GDDCVA+KSGWD +GI Y P++ + IR +TC
Sbjct: 198 PWSSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQ 257
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR--RMTMKT 350
P++ IA+G+EMSGG+++V E++T + IKT RGG+V DV + R+T
Sbjct: 258 GPYAG-IAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHI 316
Query: 351 MKWAFWITGSYGSHPD----NNYDPHALPVIQNINYRDMVAENVTMAA----RLEGIAGD 402
+ Y + P+ NNY P+ LP ++++ + + + G+
Sbjct: 317 DQAIHVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPES 376
Query: 403 PFTGICISNVTIELTNKPKKLQWNCTDITG--ISSGVTP-KPCELLP 446
P + + N I L WNC+++ G ++ VTP PC P
Sbjct: 377 PIEYVFLEN--ISFPTPVSSLGWNCSNVQGSVKNNSVTPWPPCPEFP 421
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 190/295 (64%), Gaps = 3/295 (1%)
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
NGTIDGQG +WW + L +TR +LIE++ S N+ ISN+TL NSP W VHPVY +V+
Sbjct: 6 NGTIDGQGRMWWELWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVV 65
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
++ +TILAP+ +PNTDGI+PDS + IEDCYI SGDD VAVKSGWDQYGI+ G P+ +
Sbjct: 66 IKDLTILAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNI 125
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
II+R++ +P + + GSEMSGGI +V D+ +S S VR+KT VGRGG++ ++ +
Sbjct: 126 IIQRVSGTTPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIA 185
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+TM+ +K + H D+ YD ALP+I I+ D+V +V A LE + G +
Sbjct: 186 NVTMEKVKVPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVY 245
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFP 459
GIC NV++ ++++W C + G + V P PCE L ++ + ++ C P
Sbjct: 246 EGICFRNVSLRAIR--RQVRWQCESVYGEAHEVFPAPCEELRNNG-SSSSWCGLP 297
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGIQDVRAEDITAI +ESG+RIKTAVGRGG+ KD+YV+RMTM TMKW FW+TG+YGSH
Sbjct: 1 MSGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSH 60
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
D NYDP+ALP I+ INYRDMVA+ VTMA LEGI+ D FTGICI+NVTI + K KK
Sbjct: 61 ADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQP 120
Query: 425 WNCTDITGISSGVTPKPCELLPDHEPAQ-TTECNFPDNRLPVENMGVQMCS 474
W C+D+ GI+SGVTPKPC LLPD P + TT C FP LP++ + ++ C+
Sbjct: 121 WTCSDVEGITSGVTPKPCNLLPDQGPEKITTTCEFPTETLPIDMLELKKCT 171
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 211/379 (55%), Gaps = 23/379 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG V DG T T+AFK A+ + + GG ++VP GK+LTG +L S+ L +
Sbjct: 8 NITDFGAVPDGKTLCTEAFKKAV---KKCEEAGGGTIYVPAGKFLTGPIHLVSNTNLHID 64
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVLL SQ+ +++P++ Y R E YS LI+G + +V ITG +GT+DGQGE
Sbjct: 65 AGAVLLFSQNIEDYPLV-----YSRWEGEEAEVYSPLIYGDKVENVSITG-HGTLDGQGE 118
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WWR R +LKY RP I S+ + I + +INSP+W ++PV ++V++ GITI P
Sbjct: 119 PWWRLQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNP 178
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
SPNTDGINPDSC N RI +CYI GDDCVA+KSG + Y +P + + I T +
Sbjct: 179 ADSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGVEYS--KYRIPCENITITNCTMLD 236
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
V+ +GSEMSG ++++ + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 237 GHGGVV-IGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMC 295
Query: 354 -----AFWITGSYGSHP---DNNYDP--HALPVIQNINYRDMVA-ENVTMAARLEGIAGD 402
++ G G P D N P PV + ++ ++ A E A G+
Sbjct: 296 PLVMNMYYFCGKGGKEPIVKDKNPHPVNEGTPVFRRVHLSNISAREAGACAGFFYGLPEM 355
Query: 403 PFTGICISNVTIELTNKPK 421
P I +V I + + K
Sbjct: 356 PIEDISFHDVYIHMADDAK 374
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 152/218 (69%), Gaps = 6/218 (2%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ-LFVPPGKWLT 99
F A R AS+EEFG VGDG T NT AF+ A+ L GG L VPPG+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSFNLTS FTLFLH+ AV+L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG NGTIDGQG +WW +R L +TR +LIE++ S N+ IS++TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
S+V+++ +TILAP+ +PNTDGI+P C + CY
Sbjct: 256 CSNVVMKDLTILAPLDAPNTDGIDPGLCAS-----CYF 288
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 204/380 (53%), Gaps = 23/380 (6%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG G+G +T+AFK AI+ + +GG +FVP G + G+ +L S+ TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL SQDE+++P++ Y R E YS LI+ N +V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E WWR R ELKY RP I N+ I + +INSPSW V+P+ +V V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P SPNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 232 HGHGGVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 353 WAFWITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D P+ + P+++ I D+V AA L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 402 DPFTGICISNVTIELTNKPK 421
P + SNVT+E+ P+
Sbjct: 351 MPIEDVVFSNVTVEMAQNPE 370
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 202/380 (53%), Gaps = 23/380 (6%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG G+G +T+AFK AI+ + +GG +FVP G + G+ +L S+ TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL SQDE+++P++ Y R E YS LI+ N +V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E WWR R ELKY RP I N+ I + ++NSPSW V+P+ +V V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P SPNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 232 HGHGGVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 353 WAFWITGSY----GSHPDNNYDP------HALPVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D + P+++ I D+V AA L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 402 DPFTGICISNVTIELTNKPK 421
P + SNVT+E+ P+
Sbjct: 351 MPIEDVVFSNVTVEMAQNPE 370
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 203/380 (53%), Gaps = 23/380 (6%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG G+G +T+AFK AI+ + +GG +FVP G + TG +L S+ TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL SQD +++P++ Y R E YS LI+ N +V + G GTIDGQG
Sbjct: 60 ENGAVLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVGF-GTIDGQG 113
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E WWR R ELKY RP I N+ I + ++NSPSW V+P+ +V V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQN 173
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P SPNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 232 HGHGGVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 353 WAFWITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D P+ + PV++ I D+V AA L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 402 DPFTGICISNVTIELTNKPK 421
P + SNVT+E+ P+
Sbjct: 351 MPIEDVVFSNVTVEMAQNPE 370
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 202/379 (53%), Gaps = 23/379 (6%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG G+G T+AFK AI+ + +GG +FVP G + G+ +L S+ TL++
Sbjct: 3 VNVREFGAKGNGIDKVTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL SQDE+++P++ Y R E YS LI+ N +V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 113
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E WWR R ELKY RP I N+ I + +INSPSW V+P+ +V V + I
Sbjct: 114 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 173
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P SPNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 174 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 231
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 232 HGHGGVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 290
Query: 353 WAFWITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D P+ + P+++ I D+V AA L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTE 350
Query: 402 DPFTGICISNVTIELTNKP 420
P + SNVT+E+ P
Sbjct: 351 MPIEDVVFSNVTVEMAQNP 369
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 209/376 (55%), Gaps = 24/376 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL++F + DG + +TKAF+AAI R +GG + VPPG +LTG L S+ +
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVVPPGTYLTGPIRLISNLVFEIQ 63
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A LL + D +++P ++ R + Y I+G NLT+V++TG +GT+DGQG
Sbjct: 64 AGATLLFTDDVEQFPTVD-----SRWEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGT 117
Query: 174 LWWRKFRAG--ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
WW+ R +L Y RPYLI YS I IS+L L SPSW VHP+ V +Q I+IL
Sbjct: 118 NWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISIL 177
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
P SPNTDGI+P+SC N RI +C I GDDC+A+KSG +Q + + + I T
Sbjct: 178 NPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCTM 236
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ AV+ LGSEMSG I++V + ++ G+R+KT GRGG V+++ V + M+ +
Sbjct: 237 VHGHGAVV-LGSEMSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDV 295
Query: 352 KWAFWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIA 400
F I Y P D N P P ++I++ ++VA+ V AA + G+
Sbjct: 296 LCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGLP 355
Query: 401 GDPFTGICISNVTIEL 416
P + +N+ IE+
Sbjct: 356 EMPVQDVSFTNIQIEM 371
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 172/261 (65%), Gaps = 3/261 (1%)
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS-PNTDGINPD 245
TRP L+++M+S++I ++N+TL NSP W+ HP +++ V +TILAP++S PNTDGI+PD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
SC + IE+CYI GDD +AVKSGWDQYGIAYG P++ ++IR + S SA I++GSEM
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
SGGI +V ED+ +S G+RIKTA+GRGG+++D+ R +T ++ I Y H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
D+ YD A P I NI+++++ V + R G + P I +++I ++ K K + +
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-F 239
Query: 426 NCTDITG-ISSGVTPKPCELL 445
C+ I G + V PKPCE L
Sbjct: 240 QCSFIEGRVIGSVFPKPCENL 260
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 200/376 (53%), Gaps = 23/376 (6%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
EFG G+G +T+AFK AI+ + GG +FVP G + TG +L S+ TL++ A
Sbjct: 7 EFGAKGNGIDKDTEAFKRAIEACEK---HGGGTIFVPAGIYHTGPIHLKSNMTLYIENGA 63
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VL SQD +++P++ Y R E YS LI+ N +V + G GTIDGQGE WW
Sbjct: 64 VLKFSQDIEDYPLV-----YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQGEKWW 117
Query: 177 RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
R R ELKY RP I N+ I + ++NSPSW V+P+ +V V + I P S
Sbjct: 118 RLHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDS 177
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 178 PNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHG 235
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK + F
Sbjct: 236 GVV-IGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFA 294
Query: 357 ITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAGDPFT 405
Y G +D P+ + PV++ I D+V AA L G+ P
Sbjct: 295 FYMYYHCGKGGKEKKVWDKSPYPVDSTTPVVRRIYISDVVVREARAAAGFLYGLTEMPIE 354
Query: 406 GICISNVTIELTNKPK 421
+ SNVT+E+ P+
Sbjct: 355 DVVFSNVTVEMAQNPE 370
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 135/179 (75%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y+ CR H A + E+G VGDG T NT AF A+ L+R +GG+ L VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTL+L + A +LASQD K WP+I PLPSYGRGRD G RYS+ I G+NLTDV+IT
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
G NGTI+GQG++WW KF A ELK+TR +L+E++YS NI ISN+T +++P WN+HP Y +
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCT 213
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 200/380 (52%), Gaps = 27/380 (7%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG G+G +T+AFK AI+ + +GG +FVP G + G+ +L S+ TL++
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEK---QGGGTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL SQDE+E Y R E YS LI+ N +V + G GTIDGQG
Sbjct: 60 ESGAVLKFSQDEEE---------YTRWEGEEMQVYSPLIYAENAENVAVVG-FGTIDGQG 109
Query: 173 ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E WWR R ELKY RP I N+ I + +INSPSW V+P+ +V V + I
Sbjct: 110 EKWWRLHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQN 169
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P SPNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 170 PYDSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMA 227
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 228 HGHGGVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVM 286
Query: 353 WAFWITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D P+ + P+++ I D+V AA L G+
Sbjct: 287 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDDTTPIVRRIYISDVVVREARAAAGFLYGLTE 346
Query: 402 DPFTGICISNVTIELTNKPK 421
P + SNVT+E+ P+
Sbjct: 347 MPIEDVVFSNVTVEMAQNPE 366
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 158/237 (66%), Gaps = 3/237 (1%)
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP WN+HPVY S+V+++ +T+LAP SPNTDGI+PDS +N IEDCYI +GDD +A+KS
Sbjct: 15 DSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKS 74
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
GWD+YG+AYG P+ + IRR+T SPF+ A+GSE SGG++ V AE + S G+ I
Sbjct: 75 GWDEYGMAYGRPSSHITIRRITGSSPFAG-FAVGSETSGGVEHVLAEHLNFFSSGFGIHI 133
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
KT GRGGF+++V V +T+ ++++ I G G HPD+ YD +ALPV+ + +++ +
Sbjct: 134 KTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQ 193
Query: 389 NVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELL 445
N+ A ++GIA F+ IC+SNV +L W C ++G + V P PC L
Sbjct: 194 NIREAGSIKGIATSAFSRICLSNV--KLNGGAAVRPWKCEAVSGAALDVQPSPCTEL 248
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 199/376 (52%), Gaps = 23/376 (6%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG G+G +T+AFK AI+ + GG ++VP G + G+ +L S+ TL++ A
Sbjct: 7 DFGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHVGALHLKSNMTLYIESGA 63
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VL SQDE+++P++ Y R E YS LI+ + +V + G GTIDGQGE WW
Sbjct: 64 VLKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGEKWW 117
Query: 177 RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
R R ELKY RP I N+ I + +INSPSW V+P+ +V V I I P S
Sbjct: 118 RLHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDS 177
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PNTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 178 PNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHG 235
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK + F
Sbjct: 236 GVV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFA 294
Query: 357 ITGSY----GSHPDNNYDP------HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFT 405
Y G +D + P+++ I D+V AA L G+ P
Sbjct: 295 FYMYYHCGKGGKEKRVWDKSPYPVDESTPIVRRIYISDVVVREARAAAGFLYGLTEMPIE 354
Query: 406 GICISNVTIELTNKPK 421
+ SNVT+E+ P+
Sbjct: 355 DVVFSNVTVEMAQNPE 370
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 200/375 (53%), Gaps = 23/375 (6%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG G+G +T+AFK AI+ + GG ++VP G + G+ +L S+ TL++ AV
Sbjct: 8 FGAKGNGVDKDTEAFKKAIEVCEK---NGGGTVYVPAGIYHIGALHLKSNMTLYIESGAV 64
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
L SQDE+++P++ Y R E YS LI+ + +V + G GTIDGQGE WWR
Sbjct: 65 LKFSQDEEDYPLV-----YTRWEGEEMQVYSPLIYAEDAENVAVVG-FGTIDGQGEKWWR 118
Query: 178 KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
R ELKY RP I N+ I + +INSPSW V+P+ +V V I I P SP
Sbjct: 119 LHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSP 178
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
NTDGINP+SC RI +CYI GDDCV +KSG + +P + + I
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG 236
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
V+ +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK + F
Sbjct: 237 VV-IGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAF 295
Query: 358 TGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAGDPFTG 406
Y G +D P+ + PV++ I D+V AA L G+ P
Sbjct: 296 YMYYHCGKGGKEKRVWDKSPYPVDDTTPVVRRIYISDVVVRQARAAAGFLYGLTEMPIED 355
Query: 407 ICISNVTIELTNKPK 421
+ SNVT+E+ P+
Sbjct: 356 VVFSNVTVEMAQNPE 370
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 207/376 (55%), Gaps = 24/376 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL++F + DG + +TKAF+AAI R +GG + PPG +LTG L S+ +
Sbjct: 7 SLQDFSPIADGISLDTKAFEAAIKVAER---QGGGHIVAPPGTYLTGPIRLISNLVFEIQ 63
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A LL + D +++P+++ R + Y I+G NLT+V++TG +GT+DGQG
Sbjct: 64 AGATLLFTDDVEQFPIVD-----SRLEGVKSKAYMPCIYGKNLTNVILTG-SGTLDGQGT 117
Query: 174 LWWRKFRAG--ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
WW+ R +L Y RPYLI YS I IS+L L SPSW VHP+ V +Q I+IL
Sbjct: 118 NWWKLHRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISIL 177
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
P SPNTDGI+P+SC N RI +C I GDDC+A+KSG +Q + + + I T
Sbjct: 178 NPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCTM 236
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ AV+ LGSEMS I++V + ++ G+R+KT GRGG V+++ V + M+ +
Sbjct: 237 VHGHGAVV-LGSEMSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDV 295
Query: 352 KWAFWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMA-ARLEGIA 400
F I Y P D N P P ++I++ ++VA+ V A + G+
Sbjct: 296 LCPFVINAYYFCGPKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLP 355
Query: 401 GDPFTGICISNVTIEL 416
P + +N+ IE+
Sbjct: 356 EMPVQDVSFTNIQIEM 371
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 205/380 (53%), Gaps = 25/380 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG VG+G +T+AFK AI+ +GG ++VP G +LTG +L S+ TL++
Sbjct: 4 NVRDFGAVGNGQVKDTEAFKKAIEAS---WEQGGGTVYVPAGVYLTGPIHLKSNITLYIE 60
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A L S D ++P++ Y R E YS LI+ N ++ + G GTIDGQGE
Sbjct: 61 SGATLKFSNDLDDFPLV-----YTRWEGEEQEAYSPLIYAENAENIAVVG-FGTIDGQGE 114
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+WW+ R ELKY RP + +N+ I + ++NSPSW V+P+ +V V + I P
Sbjct: 115 MWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNP 174
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
SPNTDGINP+SC RI +CYI GDDCV +KSG + + +P + + I CI
Sbjct: 175 YDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVR--IPCENIAI--TNCIM 230
Query: 294 PFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
I +GSEMSGG+++V + ++ G+RIKT GRGG V+D+ V + MK +
Sbjct: 231 AHGHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVI 290
Query: 353 WAFWITGSY----GSHPDNNYD--PHAL----PVIQNINYRDMVAENVTMAA-RLEGIAG 401
F Y G +D P+ + P+++ I D++ AA L G+
Sbjct: 291 CPFAFYMYYHCGKGGKEKRVWDKSPYPVDSTTPIVRRIYISDVIVRQARAAAGFLYGLTE 350
Query: 402 DPFTGICISNVTIELTNKPK 421
P + SNVT+E+ P+
Sbjct: 351 MPIEDVVFSNVTVEMAQNPE 370
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 124/146 (84%)
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA+GRGG+VKDVYVR MTM TMK+ FW+TGSYGSHPD +YDP ALPVIQNINY+DMVA
Sbjct: 1 IKTAIGRGGYVKDVYVRGMTMNTMKYVFWMTGSYGSHPDEHYDPKALPVIQNINYQDMVA 60
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
ENVTM A+L GI+GD FTGICISNVTI L+ KPKK+ WNCTD++G +SGVTP+PC+LLP+
Sbjct: 61 ENVTMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE 120
Query: 448 HEPAQTTECNFPDNRLPVENMGVQMC 473
+P CNFP++ +P++ + +Q C
Sbjct: 121 KQPGTIVPCNFPEDPIPIDEVKLQRC 146
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 150/213 (70%), Gaps = 5/213 (2%)
Query: 153 GTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPS 212
G L DVVI G+NGTIDGQG +WW +R G L +TRP L+E M S+ I ISN+ NSP
Sbjct: 8 GDGLPDVVIRGENGTIDGQGGIWWNMWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPF 67
Query: 213 WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
WN+ PVY S+V+++ +TILAP SPNTDGI+PDS +N IED +I +GDD VAVKSGWD+
Sbjct: 68 WNIPPVYCSNVVIRYVTILAPTDSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDE 127
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332
YGI YG P+ + IRR+T SPF+ IA+GSE SGG++ V AE+I +S GV IKT +
Sbjct: 128 YGIGYGRPSSHITIRRVTGSSPFAG-IAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNI 186
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
GRGGF+K++ V + M+ ++ I SHP
Sbjct: 187 GRGGFIKNITVSPVFMENVRTGIKIA----SHP 215
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 136/213 (63%), Gaps = 43/213 (20%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E R A D FEY AISCR HSA L +FGGVGDG TSNTKAF+ AI +LS + S+GG+ L
Sbjct: 149 ECRVANGLDCFEYPAISCRKHSAVLTDFGGVGDGKTSNTKAFQYAISNLSHYASDGGALL 208
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
VPPGKWLTGSFNLTSHFTLFL K+A +L SQDE EWP + LPSYGRGRD G
Sbjct: 209 VVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESEWPTLPVLPSYGRGRDAPDG----- 263
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
PY+IEIM+ +IQISNLTLINS
Sbjct: 264 --------------------------------------PYMIEIMFFDHIQISNLTLINS 285
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
S VHP+YSS +I+QG+TILAP+ SPNTDGI+
Sbjct: 286 LSLFVHPIYSSDIIIQGLTILAPIDSPNTDGID 318
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 32/382 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G +G+ T T+AF+ AID S GG ++ VP G +++G L S+ +
Sbjct: 11 NVNDYGAIGNHTLC-TEAFQKAIDTAS---DRGGGKVIVPAGDYVSGPLFLRSNIEFEVC 66
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A + S D P+I G E Y+SL G +L +V ITG G IDGQG+
Sbjct: 67 SGATIYFSNDIANTPIIN-----GSWEGIERKVYASLFTGHDLKNVTITG-RGRIDGQGK 120
Query: 174 LWWRKF--------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSW 213
WW F LKY RP +I + +N++I++LT+ NSPSW
Sbjct: 121 AWWDAFWETDKMRTAAGIREREPENPEGSPLKYPRPRMINLYRCENVKIADLTITNSPSW 180
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
VHPVY +VI+ GI+I+ P SPNTDGI+PD C RI +CYI GDDC+ +KSG++++
Sbjct: 181 TVHPVYCRNVIIDGISIIQPYESPNTDGIDPDCCNGVRISNCYIDCGDDCITLKSGYNEH 240
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333
G G+P + ++I T SAV +GSEMSGGI++V + + G+R+KT G
Sbjct: 241 GRKKGIPCENIVISNCTFAHGRSAV-GIGSEMSGGIKNVTVMNCVFKGTLRGLRVKTGRG 299
Query: 334 RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD-PHALPVIQNINYRDMVAENVTM 392
RGG V++++ + M+ ++ I Y Y + P +NI ++D++ NV
Sbjct: 300 RGGTVENIFASGIIMENLREGISIDMGYEGVSGKIYPVTESTPFFKNIRFKDIIGTNVEQ 359
Query: 393 AARLEGIAGDPFTGICISNVTI 414
A + G+A P I + ++ +
Sbjct: 360 AINIIGLAEAPPQFIVLEDIRM 381
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 165/253 (65%), Gaps = 3/253 (1%)
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS-PNTDGINPDSCTNTRIE 253
M+S++I ++N+TL NSP W+ HP +++ V +TILAP++S PNTDGI+PDSC + IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+CYI GDD +AVKSGWDQYGIAYG P++ ++IR + S SA I++GSEMSGGI +V
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
ED+ +S G+RIKTA+GRGG+++D+ R +T ++ I Y H D+ YD A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG- 432
P I NI+++++ V + R G + P I +++I ++ K K + + C+ I G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI-FQCSFIEGR 239
Query: 433 ISSGVTPKPCELL 445
+ V PKPCE L
Sbjct: 240 VIGSVFPKPCENL 252
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 199/373 (53%), Gaps = 23/373 (6%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ FG DG T +T A AAI+ + + GG +++P G++LTG L SH L L
Sbjct: 10 IRTFGAQPDGETPSTAAITAAIETCA---AAGGGVVYIPAGRFLTGPLRLKSHVRLHLEA 66
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A LL SQD ++PV+E R E Y+ I+G +L V ITG GTIDG+GE
Sbjct: 67 GAHLLFSQDPADYPVLET-----RWEGKEVLTYAHQIYGEDLEGVAITG-RGTIDGRGET 120
Query: 175 WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
WWR FRA + RP LI ++I I +TL+NSP+W ++PV V + +TI+ P
Sbjct: 121 WWRLFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
SPNTDGI+PDS N I +CYI GDDC+A+K+G + Y P + ++I
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHG 238
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
V+ +GSE SGGI+ V + D++ G+R+K+ GRGGFV+D+ + M+ +
Sbjct: 239 HGGVV-IGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCP 297
Query: 355 FWITGSYGS------HPDNNYDPH----ALPVIQNINYRDMVAENVTMAAR-LEGIAGDP 403
F + Y + ++ +PH A P + +++ + A V AA L G+ P
Sbjct: 298 FVLNMYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQP 357
Query: 404 FTGICISNVTIEL 416
+ ++ IEL
Sbjct: 358 LEDVLFDDIWIEL 370
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 129/165 (78%), Gaps = 2/165 (1%)
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN 368
+ DV D+T I+++S +RIKTAVGRGG+VK+++ RR TMKTMK+ FW+TGSY HP
Sbjct: 948 LTDVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTMKYVFWMTGSYKLHPVGG 1007
Query: 369 YDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCT 428
+DP ALP I NINYRDM AENVT++A+LEGI DPFTG+C+SNVTI L+ PKKLQWNCT
Sbjct: 1008 FDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQWNCT 1067
Query: 429 DITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMC 473
D++G++S V P+PC LLPD T +C+FP +++P+E++ + C
Sbjct: 1068 DVSGVTSRVKPEPCSLLPD--KGTTMDCDFPTDKIPIESVVLNKC 1110
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 28/231 (12%)
Query: 1 MGSLKTAKRTQVICIILLVGIIISLN---------TNGVESRKARNSDWFEYSAISCRAH 51
G + TAK +I + ++++++ N V S ++ EY A++CR H
Sbjct: 790 FGLISTAKSRPMIQTSFWIFVLLAISGFSIMESRIQNNVGSTSIESNKGIEYLALNCRKH 849
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
A L +FG +GDG TSNTKAF+ AI L+ +GG QL VPPG WLTGSFNLTSHFTLF
Sbjct: 850 RAVLTDFGAIGDGKTSNTKAFREAITKLTTKAVDGGVQLIVPPGNWLTGSFNLTSHFTLF 909
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ + A +LASQDE E+P+I PLPSYG R++SLI+G+NLTDVVIT D I+ Q
Sbjct: 910 IQQGATILASQDESEYPMIPPLPSYGE------ARFTSLIYGSNLTDVVIT-DVTLINTQ 962
Query: 172 GELWWRKF--RAGELK--YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
+ + R G +K + R + ++ M + S+ +HPV
Sbjct: 963 SAIRIKTAVGRGGYVKNIFARRFTMKTM--------KYVFWMTGSYKLHPV 1005
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 145/226 (64%), Gaps = 23/226 (10%)
Query: 40 WFEYSAISC--------RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
W +S SC R HS S+ EFG VGD T NTKAF+ AI +L + +GG++LF
Sbjct: 21 WTVWSNSSCKLINIKEVRPHSVSITEFGAVGDWITLNTKAFQNAIFYLKLYADKGGAKLF 80
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
VP G+W TGSF+L SH TL L KDAV+L S + +WPV++P PSYGRGR+ GG + SLI
Sbjct: 81 VPAGRWFTGSFDLISHLTLLLDKDAVILGSTNPGDWPVVDPPPSYGRGRELPGGWHRSLI 140
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
+G NLTDV+ITG+NGTIDGQ +WW IE M S+N+ ISN+T +NSP
Sbjct: 141 YGCNLTDVIITGNNGTIDGQRSIWW---------------IESMNSKNVLISNVTFLNSP 185
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
W +H VY S V VQ +TILAP PNTDGI+ S ++ YI
Sbjct: 186 FWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLIMYALKTGYI 231
>gi|414864492|tpg|DAA43049.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 205
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 128/169 (75%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y+ CR H A + E+G VGDG T NT AF A+ L+R +GG+ L VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTL+L + A +LASQD K WP+I PLPSYGRGRD G RYS+ I G+NLTDV+IT
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
G NGTI+GQG++WW KF A ELK+TR +L+E++YS NI ISN+T +++P
Sbjct: 155 GKNGTINGQGQVWWDKFHAKELKFTRGHLLELLYSDNIIISNVTFVDAP 203
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 128/165 (77%)
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN 368
+ DV ++T I+++S +RIKTA+GRGG++KD++ RR TMKTMK+ FW+TGSY HP
Sbjct: 947 LTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTMKYVFWMTGSYKLHPVGG 1006
Query: 369 YDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCT 428
+DP ALP I NI+YRDM AENVT++A+LE I PFTG+C+S+VTI L+ PKKLQWNCT
Sbjct: 1007 FDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCT 1066
Query: 429 DITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMC 473
D++G++S VTP+PC LLPD ++C+FP +++P+E++ + C
Sbjct: 1067 DVSGVTSRVTPEPCSLLPDKRTTMDSDCDFPTDKIPIESVVLNKC 1111
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 109/170 (64%), Gaps = 14/170 (8%)
Query: 1 MGSLKTAKRTQVICIILLVGIIISLNTNG---VESRKARN-----SDWFEYSAISCRAHS 52
G + T+K + I I++ L +G +ESR N + EY A++CR HS
Sbjct: 790 FGLISTSKSRPLKMIQTSFKILVVLAISGFPMMESRIQSNLGSTSNKSIEYLALNCRKHS 849
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
A L FG +GDG SNTKAF+ AI L+ ++GG QL VPPG WLTGSFNLTSHFTLF+
Sbjct: 850 AVLTNFGAIGDGKPSNTKAFREAISKLTPLAADGGVQLIVPPGSWLTGSFNLTSHFTLFI 909
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+ A +LASQDE E+P+I PLPSYG R++ L++G+NLTDVVIT
Sbjct: 910 QQGATILASQDESEYPMIPPLPSYG------DARFTGLVYGSNLTDVVIT 953
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 207/403 (51%), Gaps = 52/403 (12%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
+ ++++FG +GDG + +T+A + AID + + G L+VP G + T L S
Sbjct: 127 AQGKMVNVKQFGAIGDGKSDDTRALQRAIDAVPK-----GGTLYVPAGTYYTAPLQLKSD 181
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL+L K A LL S + + P + R TE RY SLI G N+ +V ITG+ G
Sbjct: 182 MTLYLAKGATLLGSSNIDAYK-----PIWSRWEGTEMYRYMSLITGDNVRNVTITGE-GV 235
Query: 168 IDGQGEL------------WWRK------------------FRAGELKYTRPYLIEIMYS 197
IDG GE WW K + G L Y RP LIE ++S
Sbjct: 236 IDGNGETPIHDNAGNTYGNWWSKQYKEPLSDPAVSLVQSPNYSQG-LPYARPSLIEFLHS 294
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
QNI I +T+ NSPSW +HPVY V + + I+ P TS NTDG++PDS +I D
Sbjct: 295 QNILIQGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVDPDSVNGMQIIDDTF 354
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
GDD +A+KSG D G G+P++ +++R ++ +++GSEMSGG+Q+V E+
Sbjct: 355 SVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNGHG--VSIGSEMSGGVQNVLVENC 412
Query: 318 TAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-WAFWITGSYGSH-----PDNNYDP 371
+ +G+RIKT GRGG V+++ ++M ++ AF I +Y S+ P D
Sbjct: 413 DFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYASNGSALPPGPVTD- 471
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
A P I+N+N+ ++ A G+A P I NV I
Sbjct: 472 -ATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAI 513
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 202/375 (53%), Gaps = 25/375 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++E+FG VGDG +NT A K A++ S+ GG ++VP G ++TG+ + S+ L L
Sbjct: 10 NIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTIYVPAGVFVTGAIEMKSNMHLHLE 66
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ LL S D ++PVI G RD Y S I+ + ++ ITG GT++GQG
Sbjct: 67 AGSELLFSNDRADYPVISSRWE-GASRDV----YMSCIYACHAENIAITG-FGTLNGQGA 120
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+ F+ L Y RP L+ + + + I + +I+SPSW VHP +V + G++I+ P
Sbjct: 121 YWWKLFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNP 180
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
SPNTDGINP+SC N +I DC I GDDC+A+K+G + A +P + + I T +
Sbjct: 181 ANSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERA--IPCENITITNCTMLH 238
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
V+ GSEMSG I++V + ++ G+R K+ GRGG ++++ V + M +
Sbjct: 239 GHGGVV-FGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVIC 297
Query: 354 AFWITGSYGSHPDNNYDPHA-----------LPVIQNINYRDMVAENVTMAA-RLEGIAG 401
F I Y H +P+ P ++I++ ++ A +VT AA + G+
Sbjct: 298 PF-ILNLYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPE 356
Query: 402 DPFTGICISNVTIEL 416
P I S++ I +
Sbjct: 357 MPVEDITFSHIRIAM 371
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 182/301 (60%), Gaps = 10/301 (3%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFN 103
A++ + S+ +G DG T +T AF+AA L+ + + + VPPG + L N
Sbjct: 1 AVTTAKETISVASYGARCDGATEDTAAFEAA---LAHAGAHAHTTILVPPGARCLIAPIN 57
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
LTSH TL + +A + D WP+I PSYG+GRD G RY+SL+ G ++ DV I G
Sbjct: 58 LTSHTTLRIAANATVAGVADAARWPLIPGAPSYGQGRDHPGPRYTSLVHGEHVEDVTIQG 117
Query: 164 DNGT--IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
+ T +DG G+ WW + + + TR +LIE MYS++I+I +L++ +SP WN H S
Sbjct: 118 EGPTSVLDGNGQYWWDQVHS--MTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSE 175
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V V+ + I A SPNTDG +PDS + +E V GDDCVA+KSGWD +G+AYG P+
Sbjct: 176 RVHVRNVHISAKDNSPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPS 235
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV-RIKTAVGRGGFVKD 340
+ + IR + C A IA+GSEMSGG++DV + + + +G+ +KT RGG+V++
Sbjct: 236 RNITIRDVNCTGS-KAGIAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRN 294
Query: 341 V 341
V
Sbjct: 295 V 295
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 201/375 (53%), Gaps = 25/375 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++E+FG VGDG +NT A K A++ S+ GG ++VP G ++TG+ L S+ L L
Sbjct: 9 NIEQFGAVGDGWANNTSAIKRAVEACSQ---GGGGTVYVPAGVFVTGAIELKSNMHLHLE 65
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ LL S D +++PVI G RD Y S I+ + ++ ITG GT++GQG
Sbjct: 66 AGSELLFSNDREDYPVISSRWE-GASRDV----YMSCIYACHAKNIAITG-FGTLNGQGA 119
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
WW+ F+ L Y RP L+ + + + + + +I+SPSW VHP +V + ++I+ P
Sbjct: 120 YWWKLFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSIVNP 179
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
SPNTDGINP+SC N RI DC I GDDC+A+KSG + +P + + I T +
Sbjct: 180 ANSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTED--AERVIPCENITITNCTMLH 237
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
V+ GSEMSG I++V + ++ G+R K+ GRGG ++++ V + M +
Sbjct: 238 GHGGVV-FGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIIC 296
Query: 354 AFWITGSYGSHPDNNYDPHA-----------LPVIQNINYRDMVAENVTMAA-RLEGIAG 401
F I Y H +P+ P ++I++ ++ A +VT AA + G+
Sbjct: 297 PF-ILNLYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPE 355
Query: 402 DPFTGICISNVTIEL 416
P I S++ I +
Sbjct: 356 MPVEDITFSHIRIAM 370
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 132/186 (70%)
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRP 189
++PLPSYGRG D GRY SLI+G NL+DVVITGDNG IDGQG +WW L Y+RP
Sbjct: 1 MDPLPSYGRGIDVPVGRYRSLIYGQNLSDVVITGDNGIIDGQGSVWWDLISTHSLNYSRP 60
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
++IE++ S NI ISNLT +NSP+W++HPVY S++ +Q IT+ AP P T GI PDS +
Sbjct: 61 HIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSGIVPDSSEH 120
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
I++C I +G D + +KSGWD+YG+AYG PT + IR + S A +A GSEMSGGI
Sbjct: 121 VCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAFGSEMSGGI 180
Query: 310 QDVRAE 315
D+ AE
Sbjct: 181 SDIIAE 186
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 137/196 (69%), Gaps = 1/196 (0%)
Query: 49 RAHSASLEEFGGVGDGTTSNT-KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S+ FG GDG T NT +A R + GG+ L+VPPG WLTG FNLTSH
Sbjct: 40 RGAWMSVASFGARGDGQTLNTGAFARAVARIARRRGARGGTLLYVPPGVWLTGPFNLTSH 99
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL + A++ A+QD WP+I+PLPSYGRGR+ GGRY SLI G L DV ITG+NGT
Sbjct: 100 MTLFLARGAIVRATQDTSSWPLIDPLPSYGRGRELPGGRYMSLIHGHGLQDVFITGENGT 159
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
IDGQG +WW ++ L +TRP+L+E+MYS ++ +SNL +SP WN+HPVY S+V++
Sbjct: 160 IDGQGGVWWDMWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIAN 219
Query: 228 ITILAPVTSPNTDGIN 243
+T+LAP SPNTDGI+
Sbjct: 220 LTVLAPHDSPNTDGID 235
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ-LFVPPGKWLT 99
F A R AS+EEFG VGDG T NT AF+ A+ L GG L VPPG+WLT
Sbjct: 76 FYAGAGPAREVWASVEEFGAVGDGATLNTAAFRRAVAELGARAVGGGGARLDVPPGRWLT 135
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
GSFNLTS FTLFLH+ AV+L SQD +EWP+I PLPSYGRGR+ G R+ SLI G L DV
Sbjct: 136 GSFNLTSRFTLFLHRGAVILGSQDPEEWPLITPLPSYGRGRERLGPRHISLIHGEGLNDV 195
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
VITG NGTIDGQG +WW +R L +TR +LIE++ S N+ IS++TL NSP W VHPVY
Sbjct: 196 VITGSNGTIDGQGHMWWELWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVY 255
Query: 220 SSSVIVQ 226
SV+
Sbjct: 256 CRSVLAS 262
>gi|307135908|gb|ADN33771.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Cucumis melo subsp. melo]
Length = 188
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 124/161 (77%), Gaps = 4/161 (2%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTK 70
++ +ILL ++SL T VE ++ +++ + AI+CR H+A L +FGGVGDG TSNT+
Sbjct: 16 RISAVILLA--LVSLAT--VEGKRQCPTNYLQVPAINCRQHTAVLTDFGGVGDGVTSNTQ 71
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF+ AI+HLS + GG+QL VPPGKWLTGSFNLTSHFTLF+HKDA +LASQDE EWP +
Sbjct: 72 AFRRAIEHLSPLAANGGAQLIVPPGKWLTGSFNLTSHFTLFVHKDATILASQDESEWPQV 131
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
LPSYG GRD GGRYSSLI+GTNLTDVVITG+NG Q
Sbjct: 132 AILPSYGVGRDAPGGRYSSLIYGTNLTDVVITGNNGCKSSQ 172
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 187/344 (54%), Gaps = 22/344 (6%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG +FVP G +LTG+ L S+ L L A+L S D ++PV+E R +
Sbjct: 57 GGGTVFVPSGTYLTGAIFLKSNIELHLSPGAILSFSTDLVDYPVVE-----SRWEGVQRE 111
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG--ELKYTRPYLIEIMYSQNIQIS 203
++S I+G NL ++ +TG +GT+DG G+ WW K R EL+Y RP LI Q + I
Sbjct: 112 VHASCIYGQNLENISVTG-SGTLDGNGQPWWEKHRKHPEELQYPRPKLISFDRCQRVTIK 170
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
++ L NSPSW V+P+ +V + ++IL P SPNTDGINP+SC+N RI +C I GDDC
Sbjct: 171 DVMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGINPESCSNVRISNCNIDVGDDC 230
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323
+A+K+G + +P + + I T + AV+ LGSEMSG I++V + ++
Sbjct: 231 IAIKAGTED--TQERIPCENITITNCTMVHGHGAVV-LGSEMSGDIRNVTISNCVFKQTD 287
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP--------DNNYDP--HA 373
G+R+K+ GRGG V+D+ V + M+ + F + Y P D N P
Sbjct: 288 RGIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCGPRGKDKYVWDKNPYPITDE 347
Query: 374 LPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIEL 416
P + I++ D+ A V AA L G+A I SN+ I +
Sbjct: 348 TPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNIDISM 391
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 25/373 (6%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G V DGT T+A AAI+ S + GG +FVP G +LTG+ L S+ L + A
Sbjct: 8 DYGAVQDGTKMATEAIAAAIEAAS---NAGGGTVFVPAGTYLTGAIFLKSNIELHVSPGA 64
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
+L S + ++PV+E R + ++S I+G NL ++ ITG +GT+DG G+ WW
Sbjct: 65 ILSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISITG-SGTLDGNGQPWW 118
Query: 177 RKFR--AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
K R EL+Y RP LI Q + I ++ L NSPSW V+P+ +V + ++IL P
Sbjct: 119 EKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPA 178
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
SPNTDGINP+SC+N RI +C I GDDC+A+K+G + +P + + I T +
Sbjct: 179 DSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHG 236
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
AV+ LGSEMSG I++V + ++ G+R+K+ GRGG ++D+ + + M+ +
Sbjct: 237 HGAVV-LGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICP 295
Query: 355 FWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDP 403
F + Y P D N P P + I++ D+ A V AA L G+A
Sbjct: 296 FILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQY 355
Query: 404 FTGICISNVTIEL 416
I SN+ I +
Sbjct: 356 IAEITFSNIDISM 368
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 207/399 (51%), Gaps = 36/399 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
++ FG GDG +T A A + GG + V PG++LTG+ L S+ TL +
Sbjct: 24 VKTFGAAGDGKKKDTAAIARA---IDAAAKAGGGTVVVSPGRYLTGALTLKSNVTLDVEA 80
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A LL S D +++P+ E + +G ++ YSSLI+ + I G GTIDGQG+
Sbjct: 81 GATLLGSPDPEDYPLRENV--WGEKKE-----YSSLIYADGAVHITIRG-RGTIDGQGQA 132
Query: 175 WWRKF-----------------RA--GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
WW++ RA +L+Y RP++I+++ S+++ I L LINS SW V
Sbjct: 133 WWKRMGWPDRRKIAPEQRTAAERAELAKLEYGRPHMIKLVRSKHVVIEGLHLINSASWTV 192
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
+P+ V + GITI PV SPNTDGINP+SC N +I + I GDDCV +KSG D+ G
Sbjct: 193 NPLLCEFVRIDGITIENPVPSPNTDGINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGR 252
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G P + + I + AV +GSEMSGG+++V + ++ G+R+K+ GRG
Sbjct: 253 RVGRPDENITITNCVMLKGHGAV-TIGSEMSGGVRNVVVSNCVFQGTDVGIRVKSQRGRG 311
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSY-GSHPDNNYDP--HALPVIQNINYRDMVAENVTM 392
G V+ V + M+ + AF +T Y G+ + P P +++ + ++ A
Sbjct: 312 GIVEGFVVSNVVMQDVASAFTLTSFYAGTDKPGDLFPVGEGTPRLRDFRFSNITARGSKT 371
Query: 393 AARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
A ++ G+ P I + V I+ K N D+T
Sbjct: 372 AGQITGLKEMPIENITFTGVRIQAETGMKIT--NAKDVT 408
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 143/201 (71%), Gaps = 1/201 (0%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
R S +L +FG VGDG T NT+AF+ A+ +S+ +GG QL VPPG+WLT FNLTS
Sbjct: 78 LRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSKKGGGQLNVPPGRWLTAPFNLTSF 137
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TLFL +DA +LA QDE WP++ PLPSYG GR+ G RY S I G NL DVV+TG+NG+
Sbjct: 138 MTLFLAEDAEILAVQDETLWPLLPPLPSYGYGREHYGPRYGSFIHGQNLKDVVVTGNNGS 197
Query: 168 IDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
++GQG WW+K+R+ L +TR L++IM+S + +N+TL +SP W +HP +V +
Sbjct: 198 VNGQGVYWWKKYRSKLLNHTRGPLVQIMWSSDAVFANITLRDSPFWTLHPYDCKNVTITN 257
Query: 228 ITILAPV-TSPNTDGINPDSC 247
+TILAPV +PNTDGI+PDSC
Sbjct: 258 MTILAPVFEAPNTDGIDPDSC 278
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 196/390 (50%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG VG G +T A ++A+D + G + VP GK+LTG + SH TL L
Sbjct: 10 VRDFGAVGTGDERDTAALQSALDECAGT----GGTVVVPSGKYLTGPLTVGSHTTLELEA 65
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L +D + +P E S G + G + + +V ITG GT+DGQG+
Sbjct: 66 GATLSFVRDHEAFPARE---SRWEGWEQTG--FHPCLLVAEAENVEITG-RGTVDGQGDY 119
Query: 175 WWRKF-----------------------RAGELK--YTRPYLIEIMYSQNIQISNLTLIN 209
WW+ + +A ++ RP L ++ S N+ +S +TL N
Sbjct: 120 WWQFYGVDDDELPASLADRLDSFHEANDKADDVSSFTLRPPLFQVDRSTNVSVSGITLRN 179
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + + P +PN DGI+ DS RI DCY+ +GDD V +KSG
Sbjct: 180 SPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRYVRISDCYLNAGDDAVCIKSG 239
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D+ G G P + + T + V+ +GSEMSG ++DV + T D++ G+RIK
Sbjct: 240 KDEEGRRIGRPASGITVTNCTVEAGHGGVV-IGSEMSGDVRDVTVSNCTFTDTDRGIRIK 298
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
T GRGG V+D + M+ + F I G Y D++ P + P+++NI Y D++A
Sbjct: 299 TQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSDPIPVDESTPMVRNIAYSDIIA 358
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
+V A G+ F I SNV I+ T
Sbjct: 359 RDVETAGFFAGLPEQRFENISFSNVEIDAT 388
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 201/373 (53%), Gaps = 25/373 (6%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G V DGTT T A +A + + GG +FVP G +LTG+ L S+ L + A
Sbjct: 8 DYGAVQDGTTLATGAIASA---IEAASNAGGGTVFVPSGTYLTGAIFLKSNIELHVSPGA 64
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L S + ++PV+E R + ++S I+G NL ++ +TG +GT+DG G+ WW
Sbjct: 65 TLSFSTELADYPVVE-----SRWEGVQREVHASCIYGENLENISVTG-SGTLDGNGQPWW 118
Query: 177 RKFR--AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
+K R EL+Y RP LI Q + I ++ L NSPSW V+P+ +V + ++IL P
Sbjct: 119 QKHRNHPEELQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPA 178
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
SPNTDGINP+SC+N RI +C I GDDC+A+K+G + +P + + I T +
Sbjct: 179 DSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHG 236
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
AV+ LGSEMSG I++V + ++ G+R+K+ GRGG ++D+ V + M+ +
Sbjct: 237 HGAVV-LGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVICP 295
Query: 355 FWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMAAR-LEGIAGDP 403
F + Y P D N P P + I++ D+ A V AA L G+A
Sbjct: 296 FILNLYYFCGPRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQY 355
Query: 404 FTGICISNVTIEL 416
I SN+ I +
Sbjct: 356 IAEITFSNIDISM 368
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 196/390 (50%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ E+G GD +T+A +AA+D + E G ++VP G ++TG + TL+L
Sbjct: 11 IREYGATGDSDEPDTEAIQAALDECA----ESGGTVYVPSGTYVTGPLRVGDRTTLYLDA 66
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D + +P ++ S G + G + + + +V ITG GTIDG GE
Sbjct: 67 GATLQFVGDYEAFPTVQ---SRWEGWNQYG--FHPCLLVDDAENVSITG-RGTIDGGGEY 120
Query: 175 WWRKFRAGELKYT-------------------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + A E + RP L +I S+N+ +S +TL N
Sbjct: 121 WWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQIYGSENVSVSGVTLEN 180
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKSG 240
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
+ G G P Q+ + T + V+ +GSEMSG ++DV + T D++ GVRIK
Sbjct: 241 KNAEGREVGEPASQITVTNCTVEAGHGGVV-IGSEMSGDVRDVTVTNCTFTDTDRGVRIK 299
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
TA RGG V+D+ + M+ + F I G Y D++ +P P+++N+++ ++ A
Sbjct: 300 TARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFTNITA 359
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
V A G+ F GI S+V I+ T
Sbjct: 360 RQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 195/390 (50%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ EFG SNT+A + A+D + G + VPPG ++TG + TL L
Sbjct: 11 IREFGAQSGSDDSNTEAIQTALDECAGT----GGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D + +P ++ S G D G L+ GT+ V ITG G IDG GE
Sbjct: 67 GATLRFVGDYEAFPTVQ---SRWEGWDQIGFHPCLLVDGTDT--VSITG-QGAIDGNGEY 120
Query: 175 WWRKF-------------RAGELKYT------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + R E + RP L++I ++N+ +S +TL N
Sbjct: 121 WWQFYGEPEPMLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQIFDAENVTVSGVTLRN 180
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D G G P Q+ + T + V+ +GSEMSG ++DV + T D++ G+RIK
Sbjct: 241 KDAEGREVGEPASQITVANCTVEAGHGGVV-IGSEMSGDVRDVTVSNCTFTDTDRGIRIK 299
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
T GRGG V+D+ ++ M+ + F I G Y + D++ +P P+++N+++ ++ A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPTGEGTPLVRNVSFSNITA 359
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
NV A G+ F GI +V I+ T
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 202/402 (50%), Gaps = 54/402 (13%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
TT NT A AAI+ S + GG ++VP G ++TG L SH TL L +VL +
Sbjct: 15 TTRNTPAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSVLRFTPRF 71
Query: 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW---RKFRA 181
+P P+ + G + G YS LI+G L V I G+ G I+GQG+ WW R RA
Sbjct: 72 DAYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWDAYRVIRA 125
Query: 182 G------------------------------ELKYTRPYLIEIMYSQNIQISNLTLINSP 211
G + ++ RP L+++M+ + + + +TL NSP
Sbjct: 126 GGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEGITLQNSP 185
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN H VY V ++G+ P T+PN DG++ DSC+N RI DC+ GDDC+ +KSG D
Sbjct: 186 FWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCLCLKSGID 245
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
+ G G PT+ + + T + V+ LGSE +GGI++V + I ++ G+RIKT
Sbjct: 246 EDGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIGTDRGIRIKTN 304
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHAL------PVIQNIN 381
RGG V++V + + M+ + I Y D + P A+ PVI++I
Sbjct: 305 RARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGTPVIRHIQ 364
Query: 382 YRDMVAENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKK 422
D+ A+N AA + G+ P + + +VT E+T P +
Sbjct: 365 ISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 406
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 29 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 85
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 86 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 139
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 140 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 199
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 200 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 257
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 258 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 316
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 377 ---VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCI 432
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 433 FENCERIT 440
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 195/390 (50%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ EFG SNT+A + A+D + G + VPPG ++TG + TL L
Sbjct: 11 IREFGAQSGSDDSNTEAIQTALDECAGT----GGTVSVPPGTYVTGPLRVGDRTTLHLEA 66
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D + +P ++ S G D G L+ G + V ITG GTIDG GE
Sbjct: 67 GATLRFVGDYEAFPTVK---SRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 120
Query: 175 WWRKF-------------RAGELKYT------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + R E + RP L+++ ++N+ +S +TL N
Sbjct: 121 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 180
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 181 SPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 240
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D G G P Q+ + T + V+ +GSEMSG ++DV + T D++ G+RIK
Sbjct: 241 KDAEGREVGEPASQITVTNCTVEAGHGGVV-IGSEMSGDVRDVTVTNCTFTDTDRGIRIK 299
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
T GRGG V+D+ ++ M+ + F I G Y + D++ +P P+++N+++ ++ A
Sbjct: 300 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 359
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
NV A G+ F GI +V I+ T
Sbjct: 360 RNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 195/390 (50%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ EFG SNT+A + A+D + G + VPPG ++TG + TL L
Sbjct: 33 IREFGAQSGSDDSNTEAIQTALDECA----GTGGTVSVPPGTYVTGPLRVGDRTTLQLEA 88
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D + +P ++ S G D G L+ G + V ITG GTIDG GE
Sbjct: 89 GATLRFVGDYEAFPTVK---SRWEGWDQVGFHPCLLVDGADT--VSITG-RGTIDGNGEY 142
Query: 175 WWRKF-------------RAGELKYT------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + R E + RP L+++ ++N+ +S +TL N
Sbjct: 143 WWQFYGEPESTLPDGLQDRLAEFEAQNDKQDDVSSFTHRPPLLQVFDAENVTVSGVTLRN 202
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 203 SPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSSRYVRISDAYINAGDDAICIKSG 262
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D G G P Q+ + T + V+ +GSEMSG ++DV + T D++ G+RIK
Sbjct: 263 KDAEGREVGEPASQITVTNCTVEAGHGGVV-IGSEMSGDVRDVTVTNCTFTDTDRGIRIK 321
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
T GRGG V+D+ ++ M+ + F I G Y + D++ +P P+++N+++ ++ A
Sbjct: 322 TQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSDPEPIDEGTPLVRNVSFSNITA 381
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
NV A G+ F GI +V I+ T
Sbjct: 382 RNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 29 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 85
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 86 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 139
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 140 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 199
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 200 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 257
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 258 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 316
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 377 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 432
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 433 FENCERIT 440
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 30 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 86
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 87 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 140
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 141 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFF 200
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 201 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 258
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 259 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 317
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 318 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 377
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 378 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 433
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 434 FENCERIT 441
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPLWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGIYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-EGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQSMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 194/390 (49%), Gaps = 38/390 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ E+G GD +T+A + A+D + E G ++VP G ++TG + TL L
Sbjct: 36 IREYGATGDSDALDTEAIQTALDECA----ESGGTVYVPSGTYVTGPLRVGDQTTLHLDA 91
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D + +P ++ S G + G + + + +V ITG GTIDG GE
Sbjct: 92 GATLQFVGDYEAFPTVQ---SRWEGWNQYG--FHPCLLVDDAENVSITG-RGTIDGGGEY 145
Query: 175 WWRKFRAGELKYT-------------------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + A E + RP L +I S+N+ +S +TL N
Sbjct: 146 WWQFYDAPESEIPDGLQERLAEFEEKNEKQDDVSSFTHRPPLFQISESENVSVSGVTLEN 205
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP WN H VYS +V + + I P +PN DGI+ DS RI D YI +GDD + +KSG
Sbjct: 206 SPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSSRYVRISDTYINAGDDAICIKSG 265
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
+ G G P Q+ + T + V+ +GSEMSG ++DV + T D++ GVRIK
Sbjct: 266 KNAEGREVGEPASQITVTNCTVEAGHGGVV-IGSEMSGDVRDVTVSNCTFTDTDRGVRIK 324
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVA 387
TA RGG V+D+ + M+ + F I G Y D++ +P P+++N+++ ++ A
Sbjct: 325 TARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSDSEPVDEGTPMVRNVSFTNITA 384
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELT 417
V A G+ F GI ++V I+ T
Sbjct: 385 RQVETAGFFAGLPEQYFEGISFNDVQIDAT 414
>gi|357139199|ref|XP_003571172.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 266
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ EFGGVGDG T NT A + A+ ++ + G+ L +P G WL+GSFNLTSH
Sbjct: 99 RPEVVSITEFGGVGDGRTLNTWALRKAV-----YRIQCGTTLLLPVGTWLSGSFNLTSHM 153
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
TLFL + AVL A+QD + W ++EPLPSYGRGR+ G RY+S I G L DVVITGD G I
Sbjct: 154 TLFLARGAVLKATQDTRSWLLMEPLPSYGRGRELPGARYASFIHGNGLRDVVITGDKGVI 213
Query: 169 DGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
DGQG++WW +R L++TRP L+E ++S I ISN+ L NS WN+HPVYS
Sbjct: 214 DGQGDVWWNMWRRRTLQHTRPNLVEFVHSSGIHISNVVLKNSLFWNIHPVYS 265
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 197/409 (48%), Gaps = 54/409 (13%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G DG T NTK + ID R + GG LF P G +LTGS + SH
Sbjct: 22 RAERVDMLKAGAKVDGKTLNTKLINSTID---RLNANGGGTLFFPAGTYLTGSIRMKSHI 78
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 79 TLELEAGATLLFSDSFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 132
Query: 168 IDGQGELWWRKF--------------------------------------RAGEL--KYT 187
+DGQG+ WW +F G L ++
Sbjct: 133 LDGQGKKWWMEFFRVMIDLRDNGMRNVNKYQTMWDQANDTTAIYAETNKDYIGTLQRRFF 192
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP I+ + ++++I + ++NSP W V+P + +V V+G+TI V SPNTDGINP+SC
Sbjct: 193 RPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTI-HNVPSPNTDGINPESC 251
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I DC+I GDDC+ +KSG D G G+P + + I +S V+ +GSEMSG
Sbjct: 252 RNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHGGVV-IGSEMSG 310
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPD 366
G++ V + ++ G+R+K+ GRGG V+D+ V + M+ +K A + Y P
Sbjct: 311 GVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGMPA 370
Query: 367 NNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P+ +NI+ M +V ++ G+ P + I + ++ ++
Sbjct: 371 EPKSERT-PLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHVQ 418
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 207/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKTGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVTTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +VI++GITI AP SPNTDG+NP+S
Sbjct: 191 RPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M +V ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 207/427 (48%), Gaps = 61/427 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDTENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + ++V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDI 430
NC I
Sbjct: 424 FENCERI 430
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 206/428 (48%), Gaps = 61/428 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G T NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDS 246
RP I+ + + ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+S
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPES 248
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMS
Sbjct: 249 CRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMS 307
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHP 365
G + V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 308 GSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 366 DNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+P + P+ +N++ M NV ++ G+ P + I + ++ I+ K K +
Sbjct: 368 ---AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCI 423
Query: 424 QWNCTDIT 431
NC IT
Sbjct: 424 FENCERIT 431
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 173/324 (53%), Gaps = 43/324 (13%)
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG 182
DEK WP++ LPSYG GR+ +G R+ SLI G NL DVVIT
Sbjct: 7 DEKYWPLMPALPSYGYGRERKGPRFGSLIHGQNLRDVVITA------------------- 47
Query: 183 ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
+Y L + Q +++ ++HP + + + I LA VT
Sbjct: 48 -FEYIIHVLNALALYQTLEVP---------VDIHPFFYN---ILSILTLALVT------- 87
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
DSC + IE+CYI GDD +A+KSGWDQYGIAYG P+ ++IR +T S SA I++G
Sbjct: 88 --DSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGISIG 145
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SEMSGG+ +V E++ +S GVRIKTA GRGG+++++ R +T ++ I Y
Sbjct: 146 SEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVDYN 205
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
H D+ YD A P I +I+++ + + V + R G P I ++++ ++ K K
Sbjct: 206 EHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSVGISYKKKH 265
Query: 423 LQWNCTDITG-ISSGVTPKPCELL 445
+ + C+ + G + V PKPCE L
Sbjct: 266 I-FQCSYLEGRVIRPVFPKPCENL 288
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 190/382 (49%), Gaps = 46/382 (12%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
T+A + AI+ S+ GG +F P G++LTG+ L S+ T+ L A+L S++ ++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLKSNITIHLDSGALLKFSENFDDFL 95
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF-------- 179
P +E R + L + ++ ++ ITG G IDGQG+ WW +
Sbjct: 96 PYVEM-----RYEGIVMKSFQPLFYAKDVENIAITG-RGIIDGQGKAWWNEVYRIETAKE 149
Query: 180 -------------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
R + K+ RP + +NI I +T NSP W
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWT 209
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
++P + +V V GI+I P SPNTDGINP SCTN I DC+I GDDC+ +KSG D G
Sbjct: 210 INPEFCDNVRVTGISIFNP-HSPNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDG 268
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
YG T+ + I T +S V+ +GSEMSGGI+ + + ++ G+RIK+A GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHGGVV-IGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 335 GGFVKDVYVRRMTMKTMK-WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMA 393
GG V+D+ V + MK +K A ++ Y P+ +NI+ ++ A NV A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTTVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 394 ARLEGIAGDPFTGICISNVTIE 415
++ GI P I SN+ ++
Sbjct: 388 GQILGITEMPIQNITFSNINMD 409
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 205/427 (48%), Gaps = 59/427 (13%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAANDTTAIYAETNKDYVSTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP I+ + + I+I + ++NSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPESC 249
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMSG 308
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPD 366
++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y P
Sbjct: 309 SVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKMP- 367
Query: 367 NNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+P + P+ +N++ M +V ++ G+ P + I + ++ I+ K K +
Sbjct: 368 --AEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIF 424
Query: 425 WNCTDIT 431
NC IT
Sbjct: 425 ENCERIT 431
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 187/344 (54%), Gaps = 22/344 (6%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G ++TG+ L SH L L AVL S + ++PV++ R +
Sbjct: 34 GGGTVVVPAGTFVTGAIFLKSHIELRLSPGAVLSFSTNPDDYPVVK-----SRWEGVQRE 88
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGELKYTRPYLIEIMYSQNIQIS 203
++S I+G +L +V +TG +G I+G G+ WW K R EL Y RP LI + + I
Sbjct: 89 VHASCIYGEDLENVTVTG-SGCINGNGQPWWEKQRNRPEELHYPRPKLISFDRCRRVTIR 147
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
+++L++SPSW V+P+ +V + ++IL P SPNTDGINP+SC+N RI +C+I GDDC
Sbjct: 148 DVSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNTDGINPESCSNVRISNCHIDVGDDC 207
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323
+A+K+G ++ A +P + + I T I V+ +GSEMSG I++V + ++
Sbjct: 208 IAIKAGTEE--TAERVPCENITITNCTMIHGHGGVV-IGSEMSGNIRNVTISNCVFQHTD 264
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP--------DNNYDP--HA 373
G+R+K+ GRGG V+D+ V + M+ + F + Y P D N P
Sbjct: 265 RGIRLKSRRGRGGIVEDIRVSNLVMENVICPFIMNLYYFCGPRGKEKYVWDKNPYPVTEE 324
Query: 374 LPVIQNINYRDMVAENVTMAAR-LEGIAGDPFTGICISNVTIEL 416
P + I++ D+ A V AA L G+A + + + I +
Sbjct: 325 TPQFRRIHFSDITAREVHAAAGFLYGLAEQYISEVTFDQIEISM 368
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 190/363 (52%), Gaps = 27/363 (7%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT+A + AID + S GG + VP G++LTG+ L S+ L L AVL S D K++
Sbjct: 15 NTEAIQKAIDAAA---SAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDY 71
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGELK 185
P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR L
Sbjct: 72 PIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLA 125
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTDGI+P+
Sbjct: 126 YPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPE 185
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+ LGSE
Sbjct: 186 SCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV-LGSE 241
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-----WITG 359
MSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F + G
Sbjct: 242 MSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCG 301
Query: 360 SYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVT 413
G P + P P + I++ ++ A NV +A + G+A I N+
Sbjct: 302 PRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNID 361
Query: 414 IEL 416
+ +
Sbjct: 362 VSM 364
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 190/382 (49%), Gaps = 46/382 (12%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
T+A + AI+ S+ GG +F P G++LTG+ L S+ T+ L A+L S++ ++
Sbjct: 39 TQAIQNAIEKASK---NGGGTIFFPAGEYLTGALTLRSNITIHLDSGALLKFSENFDDFL 95
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF-------- 179
P +E R + L + ++ ++ ITG G IDGQG+ WW +
Sbjct: 96 PYVEM-----RYEGIVMKSFQPLFYAKDVQNITITG-RGVIDGQGKAWWNEVYRIETAKE 149
Query: 180 -------------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
R + K+ RP + +NI I +T NSP W
Sbjct: 150 PLPPTKYQTMWEEQNKGLYTEPYYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWT 209
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
++P + +V V GI+I P SPNTDGINP SCTN I +C+I GDDC+ +KSG D G
Sbjct: 210 INPEFCDNVTVTGISIFNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDG 268
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
YG T+ + I T +S V+ +GSEMSGGI+ + + ++ G+RIK+A GR
Sbjct: 269 RKYGKATENVTITNCTMLSGHGGVV-IGSEMSGGIKKITISNCVFDGTDRGIRIKSARGR 327
Query: 335 GGFVKDVYVRRMTMKTMK-WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMA 393
GG V+D+ V + MK +K A ++ Y P+ +NI+ ++ A NV A
Sbjct: 328 GGVVEDIRVDNIVMKNIKEEAIVLSLFYDKGTQVEPVTEKTPIFRNIHMSNITASNVNKA 387
Query: 394 ARLEGIAGDPFTGICISNVTIE 415
++ GI P I SN+ ++
Sbjct: 388 GQILGITEMPIQNITFSNINMD 409
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 205/409 (50%), Gaps = 54/409 (13%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G GDG NT A AAI+ S + GG ++VP G ++TG L SH TL L +V
Sbjct: 9 YGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSV 65
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW- 176
L + +P P+ + G + G YS LI+G L V I G+ G I+GQG+ WW
Sbjct: 66 LRFTPRFDAYP---PVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWD 119
Query: 177 --RKFRAG------------------------------ELKYTRPYLIEIMYSQNIQISN 204
R RAG + ++ RP L+++M+ + + +
Sbjct: 120 AYRVIRAGGAAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEG 179
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+TL NSP WN H VY V ++G+ P T+PN DG++ DSC+N RI DC+ GDDC+
Sbjct: 180 ITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCL 239
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+KSG D+ G G PT+ + + T + V+ LGSE +GGI++V + I ++
Sbjct: 240 CLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIGTDR 298
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHAL------ 374
G+RIKT RGG V++V + + M+ + I Y D + P A+
Sbjct: 299 GIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGT 358
Query: 375 PVIQNINYRDMVAENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKK 422
PVI++I D+ A+N AA + G+ P + + +VT E+T P +
Sbjct: 359 PVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 187/367 (50%), Gaps = 23/367 (6%)
Query: 68 NTKAFKAAID-HLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
N K+ A I ++ + GG +L G + TGS L S+ L L AVL S D KE
Sbjct: 12 NEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKE 71
Query: 127 WPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGEL 184
+PV+ R + Y+S I+ ++ ITG GTIDGQG+ WW FR +L
Sbjct: 72 YPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQL 125
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
+Y RP LI Q I + +++L+NSPSW V+P+ + V I I P SPNTDGI+P
Sbjct: 126 EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDP 185
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
+SC N RI +C I GDDC+A+KSG ++ + + + I + V+ LGSE
Sbjct: 186 ESCKNVRISNCLIDVGDDCIAIKSGTEE--TKERVSCENITISNCQMLHGHGGVV-LGSE 242
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSG I++V + D++ G+R+K+ GRGG ++D+ V + M + F + Y
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDNVICPFTLNLYYFCG 302
Query: 365 P--------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVT 413
P D N P P + I++ ++ A NV AA + G++ + I V
Sbjct: 303 PKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVA 362
Query: 414 IELTNKP 420
I + +P
Sbjct: 363 ISMAKEP 369
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 203/418 (48%), Gaps = 61/418 (14%)
Query: 59 GGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVL 118
G +G T NTK + ID L+R GG LF P G +LTGS +L S+ TL L A L
Sbjct: 5 GAKANGKTLNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNITLELEAGATL 61
Query: 119 LASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
L S + ++ P +E R + LI+ + ++ I G+ GT+DGQG+ WW
Sbjct: 62 LFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GTLDGQGKKWWM 115
Query: 178 KF----------------------------------------RAGELKYTRPYLIEIMYS 197
+F + ++ RP I+ +
Sbjct: 116 EFFRVMIDLKDNGMRDVNKYQPMWDAANDTTAIYAETNKDYVNTLQRRFFRPPFIQPVRC 175
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITI-LAPVTSPNTDGINPDSCTNTRIEDCY 256
+ ++I + +INSP W V+P + +V ++GITI AP SPNTDG+NP+SC N I DC+
Sbjct: 176 KKVKIEGVKIINSPFWTVNPEFCDNVTIKGITIDNAP--SPNTDGVNPESCRNVHISDCH 233
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSG ++ V +
Sbjct: 234 ISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMSGSVRKVTISN 292
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHA-- 373
++ G+RIK+ GRGG V+D+ V + M +K A + Y P +P +
Sbjct: 293 CVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP---AEPKSER 349
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
P+ +N++ M NV ++ G+ P + I + ++ I+ K K + NC IT
Sbjct: 350 TPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ-GGKQKCIFENCERIT 406
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 204/432 (47%), Gaps = 59/432 (13%)
Query: 44 SAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFN 103
+A A + + G +G NTK ID L+R GG LF P G +LTGS
Sbjct: 8 AATVLHAERVDMLKIGAKANGKVLNTKLINTTIDRLNR---NGGGTLFFPAGTYLTGSIR 64
Query: 104 LTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
L S+ TL L A LL S + ++ P +E R + LI+ + ++ I
Sbjct: 65 LKSNITLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIK 119
Query: 163 GDNGTIDGQGELWWRKF----------------------------------------RAG 182
G+ GT+DGQG+ WW +F
Sbjct: 120 GE-GTLDGQGKKWWMEFFRVMIDLKDNGMHDLNKYQPMWDAENDTTAIYTETNKDYVSTL 178
Query: 183 ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
+ ++ RP I+ + + ++I + ++NSP W V+P + +V ++GITI V SPNTDGI
Sbjct: 179 QRRFFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGI 237
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP+SC N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +G
Sbjct: 238 NPESCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IG 296
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSG ++ V + +E G+RIK+ GRGG V+D+ V + M +K A + Y
Sbjct: 297 SEMSGSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKY 356
Query: 362 GSHPDNNYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
P +P + P+ +N++ M +V ++ G+ P + I + ++ I+ K
Sbjct: 357 SPMP---AEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GGK 412
Query: 420 PKKLQWNCTDIT 431
K + +C IT
Sbjct: 413 QKCIFEDCERIT 424
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 187/367 (50%), Gaps = 23/367 (6%)
Query: 68 NTKAFKAAID-HLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
N K+ A I ++ + GG +L G + TGS L S+ L L AVL S D KE
Sbjct: 12 NEKSVTATIQGYIDQLHQAGGGRLMFASGVYPTGSLMLKSNVELHLQPGAVLRFSDDPKE 71
Query: 127 WPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGEL 184
+PV+ R + Y+S I+ ++ ITG GTIDGQG+ WW FR +L
Sbjct: 72 YPVV-----VSRWEGVKREVYASCIYADGAENIAITG-FGTIDGQGQKWWDVFRNHPEQL 125
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
+Y RP LI Q I + +++L+NSPSW V+P+ + V I I P SPNTDGI+P
Sbjct: 126 EYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGIDP 185
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
+SC N RI +C I GDDC+A+KSG ++ + + + I + V+ LGSE
Sbjct: 186 ESCKNVRISNCLIDVGDDCIAIKSGTEE--TKERVSCENITISNCQMLHGHGGVV-LGSE 242
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSG I++V + D++ G+R+K+ GRGG ++D+ V + M + F + Y
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDNVICPFTLNLYYFCG 302
Query: 365 P--------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVT 413
P D N P P + I++ ++ A NV AA + G++ + I V
Sbjct: 303 PKGKEKYVWDKNPYPISEETPQFRRIHFVNISARNVHAAAGFIYGLSEQFISDISFHEVA 362
Query: 414 IELTNKP 420
I + +P
Sbjct: 363 ISMAKEP 369
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 198/405 (48%), Gaps = 51/405 (12%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ + G G NT+A AI +R +GG + VPPG WLTG+ + S L L
Sbjct: 22 IRDHGARPGGALLNTRAIAEAIQACAR---QGGGHVVVPPGIWLTGAIHFRSRIDLHLEA 78
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGG----RYSSLIFGTNLTDVVITGDNGTIDG 170
A L SQ+ ++ LP+ R GG YS ++ D+ ITG G ++G
Sbjct: 79 GAELRFSQNPDDY-----LPAVLSQR---GGVMIYNYSPFLYAHRCEDISITG-AGLLNG 129
Query: 171 QGELWW---------------------------RKFRAGELKYTRPYLIEIMYSQNIQIS 203
QG+ WW R F E RP + + + + I
Sbjct: 130 QGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAG-VRPVFCQPIECKRVLIE 188
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAP--VTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+T +SPSW + PV+ S +I++ TIL P + S NTDGI+PD+C N IE C + +GD
Sbjct: 189 GVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVVDTGD 248
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
D + +K+G D+ G+P++ ++IR S I +GSEMS G++++ A D T
Sbjct: 249 DAICIKAGRDEDAWEAGIPSENILIRHCEIRSGHGG-ITIGSEMSAGVRNLHAHDCTCDG 307
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL---PVI 377
+++ +RIKT GRGGF+KD+ + +T + ++ A +T YG + DP L P +
Sbjct: 308 TDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAV 367
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
+NI R++ ++ A L G+ G P + + N+ I P +
Sbjct: 368 ENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNPLR 412
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + N+ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKNIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 202/383 (52%), Gaps = 29/383 (7%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + ++ ++G DG T T+A AI+ S + GG + +P G +LTG+ S+
Sbjct: 51 KMQAYNIVDYGAPQDGKTPATEAIANAIEAAS---NAGGGTVVIPSGTYLTGAIFFKSNI 107
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A+L S + ++PV+E R + ++S I+G NL ++ +TG +G +
Sbjct: 108 ELHLSPGAILSFSTNPADYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGIL 161
Query: 169 DGQGELWWRKFR--AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
+G G+ WW K R EL+Y RP LI Q + I ++ L NSPSW ++P+ +V +
Sbjct: 162 EGNGQPWWEKHRNHPEELQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTID 221
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD--QYGIAYGMPTKQL 284
++IL P SPNTDGINP+SC+N RI +C I GDDC+A+K+G + Q IA + +
Sbjct: 222 NLSILNPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA----CENI 277
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
I T + V+ LGSEMSG I++V + ++ G+R+K+ GRGG ++D+ V
Sbjct: 278 TITNCTMVHGHGGVV-LGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVS 336
Query: 345 RMTMKTMKWAFWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMAA 394
+ M+ + F + Y P D N P P + I++ D+ A V AA
Sbjct: 337 NIVMEEVICPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAA 396
Query: 395 -RLEGIAGDPFTGICISNVTIEL 416
L G+A I SN+ I +
Sbjct: 397 GFLYGLAEQYIAEITFSNIDISM 419
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 191/362 (52%), Gaps = 25/362 (6%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+ + AID +Q+ GG ++ +P G++LTG L + L L A L S ++++P
Sbjct: 18 TEGIQKAIDEA--YQN-GGGKVVIPAGEFLTGPLFLKDNIELHLENGAHLKFSDKQEDYP 74
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGELKY 186
V+ R + Y+S +F ++ +TG GTIDG G WW FR ELKY
Sbjct: 75 VVT-----SRWEGVKRKVYASCLFAEGARNIAVTG-FGTIDGNGMEWWDVFRNRREELKY 128
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP LI + ++I + ++ LINSPSW V+P+ + V ++IL P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNTDGIDPES 188
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N RI +C+I GDDC+A+KSG + + + + I T + AV+ GSEMS
Sbjct: 189 CRNVRISNCHIDVGDDCIAIKSGTED--TEERVACENITITNCTMVHGHGAVV-FGSEMS 245
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP- 365
G I++V + D++ G+R K+ GRGG V+DV V + M+ + F I Y P
Sbjct: 246 GDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVMEGVICPFIINLYYFCGPR 305
Query: 366 -------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
D N P P+ + +++ ++ A NV +A + G+A T I S + I
Sbjct: 306 GKDQYVWDKNPYPVTAETPMFRRLHFANITARNVHASAGYIYGLAEQYATDITFSQIDIS 365
Query: 416 LT 417
L
Sbjct: 366 LA 367
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 200/424 (47%), Gaps = 53/424 (12%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP I+ + + ++I + ++NSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMSG 308
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
++ V + ++ G+RIK+ GRGG V+D+ V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 368 NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
P+ +N++ M +V ++ G+ P + I + ++ I+ + K + +C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQ-GARQKCIFEDC 427
Query: 428 TDIT 431
IT
Sbjct: 428 ERIT 431
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 124/191 (64%), Gaps = 17/191 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
F VG S F A + +L ++ V GKW F L TL H ++
Sbjct: 1016 FDLVGAAAESGDDEFTAKLRYLFEL---SATETDVAFGKW----FGLRYIDTLLDHSKSM 1068
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
+ + L SYGRGRD GR+SSLIFGTNLTDV+ITG NGTIDGQG WW
Sbjct: 1069 ---------FQTLLLLYSYGRGRDAPDGRFSSLIFGTNLTDVIITGYNGTIDGQGCYWWD 1119
Query: 178 KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
KF GELK TRPY+IEIM+S +IQISNLTLINSPSW VHP+Y+S +I+QG+TILAPV SP
Sbjct: 1120 KFHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSP 1179
Query: 238 NTDGINP-DSC 247
NTDGI+P DSC
Sbjct: 1180 NTDGIDPGDSC 1190
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 97/103 (94%)
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
++TRPYLIE+M+S NIQISNLTL+NSPSWNVHPVYSS++IVQGITI APVTSPNTDGINP
Sbjct: 97 RHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGINP 156
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
DSCTN RIEDCYIVSGDDCVAVKSGWD+YGI +G PTKQL+I
Sbjct: 157 DSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 190/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
+ L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 SDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 4/214 (1%)
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+PDS TN I CY+ +G D + +KSGWD+YGI++ P+ + I +T + + IA G
Sbjct: 9 HPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFG 68
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SEMSGGI +VRA + ++S G+RIKTA GRGG+V++VY+ ++M + A ITG+YG
Sbjct: 69 SEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYG 128
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
HPD+ YD ALPVI NI +D+V N+ +A LEGI GD F+ IC+SNV++ + +
Sbjct: 129 EHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHP- 187
Query: 423 LQWNCTDITGISSGVTPKPCELLPDHEPAQTTEC 456
WNC+ I G S+ V P+ CE L + QT+ C
Sbjct: 188 --WNCSLIEGYSNSVIPESCEQLRSN-CRQTSIC 218
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 188/383 (49%), Gaps = 48/383 (12%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
T+A + AI+ S+ GG +F P G++LTG+ L S+ T+ L A+L S++ ++
Sbjct: 41 TEAIQGAIEKASK---NGGGTIFFPAGEYLTGALKLKSNITIHLDSGALLKFSENFDDYL 97
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF-------- 179
P +E R +S L + ++ ++ I G G IDGQG+ WW +
Sbjct: 98 PYVEM-----RYEGIVMQSFSPLFYAKDVENITIKG-RGVIDGQGKAWWNEVYRIETAKG 151
Query: 180 -------------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
R + + RP + +NI I +T NSP W
Sbjct: 152 PIPETKYQKMWTEQNKGIVYEPYYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWT 211
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
++P + +V V GITI P SPNTDGINP SCTN I +C+I GDDC+ +KSG D G
Sbjct: 212 INPEFCDNVTVTGITINNP-HSPNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADG 270
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
YG T+ + I T +S V+ +GSEMSGGI+ + + ++ G+RIK A GR
Sbjct: 271 RKYGKATENVTITNCTMLSGHGGVV-IGSEMSGGIKKITISNCVFDGTDRGIRIKAARGR 329
Query: 335 GGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTM 392
GG V+D+ V + MK +K I + DN +P P+ +NI+ ++ NV
Sbjct: 330 GGVVEDIRVDNIVMKNIKEEAIILDLF-YDKDNPVEPVTERTPIFRNIHISNVTGGNVNK 388
Query: 393 AARLEGIAGDPFTGICISNVTIE 415
A + GI P I SN+ ++
Sbjct: 389 AGFVRGIVEMPIQNITFSNINMD 411
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 199/424 (46%), Gaps = 53/424 (12%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDINKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP I+ + + ++I + ++NSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGSEMSG 308
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
++ V + ++ G+RIK+ GRGG V+D+ V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 368 NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
P+ +N++ M +V ++ G+ P I + ++ I+ + K + +C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHIQ-GARQKCIFEDC 427
Query: 428 TDIT 431
IT
Sbjct: 428 ERIT 431
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTYE---RIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 190/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG 359
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F +
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 360 SYGSHPDNN----YDPHALPV------IQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
Y P ++ A P+ + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTSAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 199/375 (53%), Gaps = 29/375 (7%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G DGTT T+A AI+ S + GG + +P G + TG+ L S+ L + A
Sbjct: 8 DYGAPQDGTTPATEAIANAIEAAS---NAGGGTVVIPSGTYFTGAIFLKSNIELHVSPGA 64
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
+L S + ++PV+E R + ++S I+G NL ++ +TG +G ++G G+ WW
Sbjct: 65 ILSFSTNPADYPVVE-----SRWEGVQREVHASCIYGQNLENISVTG-SGILEGNGQPWW 118
Query: 177 RKFR--AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
K R +L+Y RP LI Q + I ++ L NSPSW V+P+ +V + ++IL P
Sbjct: 119 EKHRNHPEDLQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPA 178
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD--QYGIAYGMPTKQLIIRRLTCI 292
SPNTDGINP+SC+N RI +C I GDDC+A+K+G + Q IA + + I T +
Sbjct: 179 DSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA----CENITITNCTMV 234
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
V+ LGSEMSG I++V + ++ G+R+K+ GRGG ++D+ V + M+ +
Sbjct: 235 HGHGGVV-LGSEMSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVI 293
Query: 353 WAFWITGSYGSHP--------DNNYDP--HALPVIQNINYRDMVAENVTMAAR-LEGIAG 401
F + Y P D N P P + I++ D+ A V AA L G+A
Sbjct: 294 CPFILNLYYFCGPRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLYGLAE 353
Query: 402 DPFTGICISNVTIEL 416
I SN+ I +
Sbjct: 354 QYIAEITFSNIDISM 368
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 24/347 (6%)
Query: 84 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE 143
S+GG + VP G++LTG+ L S+ L L AVL S D K++PV+ + R
Sbjct: 28 SDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSDDPKDYPVV-----HSRWEGVH 82
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--AGELKYTRPYLIEIMYSQNIQ 201
Y+S I+ N+ ++ +TG GT+DG G+ WW FR L Y RP L+ I
Sbjct: 83 RKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNEPDNLAYPRPKLMSFHNCHRIT 141
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+ ++ LI SPSW ++P+ S+ +TIL P SPNTDGI+P+SC N RI +C+I GD
Sbjct: 142 VKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGIDPESCKNVRISNCHIDVGD 201
Query: 262 DCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DC+A+K+G D Y + + + I T + V+ LGSEMSG I+++ +
Sbjct: 202 DCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV-LGSEMSGSIRNITISNCIFQ 257
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-----WITGSYGSHP---DNNYDP- 371
+++ G+R+K+ GRGG V+D+ V + M + F + G G P + P
Sbjct: 258 ETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFCGPRGKEPYVWEKKAYPI 317
Query: 372 -HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIEL 416
P + I++ ++ A NV +A + G+A I N+ + +
Sbjct: 318 DERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNIDVSM 364
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 195/402 (48%), Gaps = 40/402 (9%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+S ++ + ++ +FG D + T A K AI S+ GG ++ PPG +LTG
Sbjct: 13 FSFVAQAQLALNVLDFGAKNDSSALATTAIKEAIAKASQ---AGGGTIYFPPGTYLTGPI 69
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+L S+ TLF+ A L S + + + P R T +S I+ ++ IT
Sbjct: 70 HLKSNITLFIEAGAELCFSDNFDHYLPMVP----SRWEGTMVTNFSPFIYAYEAENIRIT 125
Query: 163 GDNGTIDGQGELWW----------------RKFRA-------------GELKYTRPYLIE 193
G GT++G G+ WW ++F E + RP I+
Sbjct: 126 G-RGTLNGNGKKWWAYSEVHVKNSPESKWQKEFHKLNKNVLHPDLPGWVERGFLRPPFIQ 184
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
MY +N++I +T+ NSP W V+P + +V + G+TI P SPNTDGINP+SC+N I
Sbjct: 185 PMYCKNVRIDGITIKNSPFWTVNPEFCDNVTIDGVTINNP-PSPNTDGINPESCSNVHIS 243
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+C+I GDDC+ +KSG D+ G P + I T +S V+ +GSEMSG ++ +
Sbjct: 244 NCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGHGGVV-IGSEMSGDVKKIV 302
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
+ ++ G+RIKTA GRGG V+D+ V + MK +K + + D
Sbjct: 303 ISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLDMQYAKTDREPVSER 362
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P NI+ ++ A+ A L G+ P + SN+ +E
Sbjct: 363 TPRFSNIHLSNITAQG-EQAGYLNGLEEMPIENVSFSNMVME 403
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 205/402 (50%), Gaps = 47/402 (11%)
Query: 47 SCRAHSA-SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
S +A S ++ ++G D + T A K AID S+ GG ++ P GK+LTG+ +L
Sbjct: 24 SAQAQSYYNVTKYGAKNDSSKLATVAIKKAIDAASK---AGGGTVYFPAGKYLTGAIHLK 80
Query: 106 SHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
S+ T+F+ A L S + ++ P++E S G D + +S L + ++ I G
Sbjct: 81 SNITIFIDAGAELHFSDNFDDYLPMVE---SRYEGVDVKS--FSPLFYAYKAENISIIG- 134
Query: 165 NGTIDGQGELWW---RKFRAGELK--------------------------YTRPYLIEIM 195
G IDG G+ WW ++ G+ + + RP I+ M
Sbjct: 135 RGLIDGHGKKWWDFVEGYKEGQARSKWQYEFDKLNKDIVLPDDPKQMKRGFLRPPFIQTM 194
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
+ +N+ I +T+ NSP W V+P +S +V + +TI P SPNTDGINP+SC N I DC
Sbjct: 195 FCKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNTDGINPESCKNVHISDC 253
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+I GDDC+ +KSG D+ G +P + +I T +S V+ +GSEMSG ++ +
Sbjct: 254 HISVGDDCITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGGVV-IGSEMSGDVRKITIS 312
Query: 316 DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA-- 373
+ ++ G+RIKTA GRGG V+++ V + MK +K + + N P +
Sbjct: 313 NCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIMKDIKQQAIVLDM--QYAKTNVQPVSDR 370
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P +NI++ ++ + V AA L G+ P I +++ +E
Sbjct: 371 TPKFRNIHFSNITGQ-VNQAAYLNGLEEMPIENITFNDINME 411
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + +F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCSFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 199/424 (46%), Gaps = 53/424 (12%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + + G +G NTK + ID L+R GG LF P G +LTGS +L S+
Sbjct: 20 RAERVDMLKAGAKANGKALNTKLINSTIDRLNR---GGGGTLFFPAGTYLTGSIHLKSNI 76
Query: 109 TLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
TL L A LL S + ++ P +E R + LI+ + ++ I G+ GT
Sbjct: 77 TLELEAGATLLFSDNFDDYLPFVEV-----RHEGVMMKSFQPLIYAVDAENITIKGE-GT 130
Query: 168 IDGQGELWWRKF----------------------------------------RAGELKYT 187
+DGQG+ WW +F + ++
Sbjct: 131 LDGQGKKWWMEFFRVMIDLKDNGMRDVNKYQPMWDAQNDTTAIYAETNKDYVSTLQRRFF 190
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP I+ + + ++I + ++NSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 191 RPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESC 249
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I DC+I GDDC+ +KSG D G+P + + I T ++ V+ +GSEMSG
Sbjct: 250 RNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHGGVV-IGSEMSG 308
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
++ V + ++ G+RIK+ GRGG V+D+ V + M +K + S
Sbjct: 309 SVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMPA 368
Query: 368 NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
P+ +N++ M + ++ G+ P + I + ++ I+ + K + +C
Sbjct: 369 EAKSERTPIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHIQ-GARQKCIFEDC 427
Query: 428 TDIT 431
IT
Sbjct: 428 ERIT 431
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 201/429 (46%), Gaps = 53/429 (12%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+ A+ A + E G NT+ I+ L++ GG LF P G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASI 69
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
++ S+ TL L A L S + ++ P +E R + LI+ T+ ++ I
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITI 124
Query: 162 TGDNGTIDGQGELWWRKF-----------------------RAGELK------------- 185
G+ G +DGQG+ WW++F +A ++K
Sbjct: 125 KGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHST 183
Query: 186 ----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
+ RP I+++ +N++I +T++NSP W V+P + +V V+G+TI V SPNTDG
Sbjct: 184 LDRRFLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDG 242
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
INP+SC+N I DC+I GDDC+ +KSG D G P + + I T +S V+ +
Sbjct: 243 INPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGGVV-I 301
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
GSEMSGG++ V + ++ G+RIK+ GRGG V+D+ V + M +K +
Sbjct: 302 GSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLK 361
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
S PV +NI + +++G+ P GI ++ + K +
Sbjct: 362 YSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVN-DAKEE 420
Query: 422 KLQWNCTDI 430
L +C D+
Sbjct: 421 CLFRDCKDL 429
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 39/391 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ E+G + D T A + A+D + E G ++VP G++ TG + TL L
Sbjct: 11 IREYGAISDSDDPATDAIQTALDECA----ETGGTVYVPAGRFRTGPLRIGDRTTLHLDP 66
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L D +P +E S G + G + ++ T+ +V I+G GTIDG G+
Sbjct: 67 GATLTFVGDYDAFPTVE---SRWEGWNQYG--FHPCLWVTDAENVEISG-RGTIDGNGQY 120
Query: 175 WWRKFRAGELKYT-------------------------RPYLIEIMYSQNIQISNLTLIN 209
WW+ + A + + RP L +I S+N+ +S +TL N
Sbjct: 121 WWQFYGADDDELPEGLRERLAEFNGKNDKADDVSSFTLRPPLFQISESENVTVSGVTLQN 180
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
SP WN H VYS +V + + +L P +PN DGI+ DS RI D YI +GDD + +KS
Sbjct: 181 SPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDSSRYVRISDAYINAGDDAICIKS 240
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G + G G P Q+ + T + V+ +GSEMSG ++DV + T D++ GVRI
Sbjct: 241 GKNAEGREVGEPASQITVTNCTVEAGHGGVV-IGSEMSGDVRDVAVTNCTFTDTDRGVRI 299
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMV 386
KT RGG V+D+ + M+ + F I G Y + D+ +P P+++N+ + ++
Sbjct: 300 KTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDSEPEPVDEGTPMVRNVTFSNIT 359
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELT 417
A NV A G+ F GI NV I+ T
Sbjct: 360 ARNVETAGFFAGLPEQYFEGIEFDNVRIDAT 390
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 200/395 (50%), Gaps = 38/395 (9%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ +FG GDG T +T +AAI + G ++F P G +LTG L S+ TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY------------SSLIFGTNLTDVV 160
KDAVLL + D +P+ LP+ + ++++ Y +SLI G N+ +V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 161 ITGDNGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
I G+ GTIDG E WW++ + + + RP + + +NI I LT+ NSP+W +HP
Sbjct: 197 IIGE-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGLTIKNSPAWTIHPF 254
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
S ++ +TI P SPNTDG+NP++ N I C GDDC+A+KSG G
Sbjct: 255 QSENLKFINLTIENPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLG 314
Query: 279 MPTKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
T+++ +R C + + +GSEMSGG+++V E +++ G+RIKT GRGGF
Sbjct: 315 KLTEKVFVR--NCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMVA 387
+ +++ ++ M +K F I Y D + LP+ I NI +D+
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGC 432
Query: 388 ENVTMAA-RLEGIAGDPFTGICISNVTIELTNKPK 421
N +AA + G+ + + N+ + K
Sbjct: 433 TNTQVAAGFMYGLPERKIEKVIMENIYVHFDENAK 467
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 203/428 (47%), Gaps = 55/428 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
AI+ +A + + G DG T NT +D LS+ GG LF P G +LTG+ L
Sbjct: 17 AITLKAERVDMLKSGAKADGKTLNTTLINHTVDRLSQ---AGGGTLFFPAGTYLTGAIRL 73
Query: 105 TSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL L A LL S + ++ P +E R +S LI + ++ I G
Sbjct: 74 KSNITLELEAGATLLFSDNFDDYLPFMEV-----RHEGVMMKSFSPLISAMDAENITIKG 128
Query: 164 DNGTIDGQGELWWRKFRA--------------------------------------GELK 185
+ GT+DGQG+ WW +F G LK
Sbjct: 129 E-GTLDGQGKAWWTEFFRIYVDLEKNGMRELNKYQPLWERENDVEALYAETNEDWHGTLK 187
Query: 186 --YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
+ RP I+ + + ++I + +INSP W V+P + +V+V G+TI V SPNTDGIN
Sbjct: 188 RRFFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTI-HNVPSPNTDGIN 246
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
P+SC N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GS
Sbjct: 247 PESCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHGGVV-IGS 305
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYG 362
EMSG ++ V + ++ G+RIK+ GRGG V+D+ V + M +K A + Y
Sbjct: 306 EMSGSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYS 365
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
P P+ ++I+ + A V ++ G+ P T I + ++ ++ + K
Sbjct: 366 EMPVEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVK-NAREKC 423
Query: 423 LQWNCTDI 430
+ NC I
Sbjct: 424 IFENCERI 431
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 203/409 (49%), Gaps = 54/409 (13%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G GDG NT A AAI+ S + GG ++VP G ++TG L SH TL L ++
Sbjct: 9 YGAQGDGLQDNTAAIAAAIEACS---AGGGGTVYVPAGDYVTGPIVLRSHITLQLEAGSM 65
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW- 176
L + + P+ + G + G YS LI+G L V I G+ G I+GQG+ WW
Sbjct: 66 LRFT---PRFDAYAPVQTRWSGYEMWG--YSPLIYGNGLKQVAIKGE-GVIEGQGQAWWD 119
Query: 177 --RKFRAG------------------------------ELKYTRPYLIEIMYSQNIQISN 204
R RAG + ++ RP L+++M+ + + +
Sbjct: 120 AYRVIRAGGTAPASEHLPKLVELNRVLTDTVKSNIVEWQTQFLRPPLLQLMHCEEVVLEG 179
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+TL NSP WN H VY V ++G+ P T+PN DG++ DSC+N RI DC+ GDDC+
Sbjct: 180 ITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDSCSNVRISDCHFDVGDDCL 239
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+KSG D G G PT+ + + T + V+ LGSE +GGI++V + I ++
Sbjct: 240 CLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVV-LGSETAGGIRNVTISNCIFIGTDR 298
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHAL------ 374
G+RIKT RGG V++V + + M+ + I Y D + P A+
Sbjct: 299 GIRIKTNRARGGGVENVRISNIYMEDVLCPLAINAFYKHGIDESNPLLTSPEAVPVTEGT 358
Query: 375 PVIQNINYRDMVAENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKK 422
PVI++I D+ A+N AA + G+ P + + +VT E+T P +
Sbjct: 359 PVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTFEMTLDPAE 407
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 188/366 (51%), Gaps = 33/366 (9%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTI 414
N+ +
Sbjct: 357 FDNIDV 362
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
DS +T IEDC I G D +A+KSGWD+YGIAYG PT + IRR+ S + +A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGI +V E + +S SG+ +T GRGG+++++ + + M+ + AF TG GSH
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PD+++DP+ALPV+ +I ++++ N+T+A GI PFT IC+SN+++ T P +
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-TTPPASIS 229
Query: 425 WNCTDITGISSGVTPKPC 442
W C++++G S V P+PC
Sbjct: 230 WVCSNVSGFSQWVFPEPC 247
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWNTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 192/366 (52%), Gaps = 28/366 (7%)
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
+G + T +A I+ + GG QL + G + GS L S FTLFL AVL
Sbjct: 13 LGGTVSERTNCLQATINDI---LEAGGGQLNLTAGVYEVGSLELGSDFTLFLEAGAVLKF 69
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF- 179
S + +P +E R Y + ++G++L V ITG+ G +DGQG+ WWR+F
Sbjct: 70 SHETDVYPPVE-----SRWEGATQTVYRACLYGSHLKRVKITGE-GVVDGQGKKWWRRFD 123
Query: 180 -RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+A EL+Y RPYL I +S+ + I N+T +NSP+W +HP +V + +T++ P SPN
Sbjct: 124 EKAAELEYPRPYLCSIEHSEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNPKNSPN 183
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TDG++P+SC N RI +C GDDC+A+KSG + + + + +II + V
Sbjct: 184 TDGLDPESCRNIRIANCCFDVGDDCIAIKSGTED--ASQSIACENIIISGCNMVHGHGGV 241
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
+ GSEMSG I++V + D++ G+R KT GRGG + + V + M + I
Sbjct: 242 V-FGSEMSGDIRNVTISNCVFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCPLIIN 300
Query: 359 GSY--GSHPDNNY--DPHALPV------IQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
Y G + Y ALPV + N+++ ++A N+ A I G P +
Sbjct: 301 SYYFCGKRGNEAYVWTKEALPVDERTPKLSNLSFSHLIATNIRSCAGF--IYGLP--EMA 356
Query: 409 ISNVTI 414
ISNVT+
Sbjct: 357 ISNVTL 362
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+ I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYAFCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASAGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++P++ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPIV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 204/425 (48%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADIQGRKLNTALINSTID---RLNANGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ +T+INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M + K A + Y P
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG + WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNEKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI +C+I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNCHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 218/443 (49%), Gaps = 67/443 (15%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S +++++G V DGTT NT AF+ AI + GG ++ VP GK+LTG+ +L S+ L
Sbjct: 57 SYNIKDYGAVADGTTLNTGAFEKAIKECAE---NGGGKVIVPNGKYLTGAIHLESNVNLH 113
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L +A +L S + K++P++ + TE YS L++ N T+V ITG GT++GQ
Sbjct: 114 LDDNAEILFSTNPKDYPIV-----HTSFEGTEVMNYSPLVYAKNKTNVAITGK-GTLNGQ 167
Query: 172 GEL--WW--------------------------------------RKFRAGELKYTRPYL 191
WW R F GE +Y RP
Sbjct: 168 ANSSNWWVWSGGKSYGWQKGNPSQNDPANREVLVDMAEKGVPVTERVF--GEGRYLRPNF 225
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
IE + I ++ +IN+P W +HP+ S+++I+ G+T+ + PN DG +P+ N
Sbjct: 226 IEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCDPEYSQNII 283
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
I++C +GDDC+A+KSG D G +P+K +I++ I V+ +GSE+S G+ +
Sbjct: 284 IKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHGGVV-IGSEISAGVNN 342
Query: 312 VRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF----WITGSYGSHP 365
V E+ + + + + +RIKT RGG ++DVYVR + + T+K YGS
Sbjct: 343 VFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNVYGSQT 402
Query: 366 DNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+ +PVI+NI+ ++ + EG P + + NV IE + L+
Sbjct: 403 GS-----FIPVIRNISLENVTVKKAGKYGVWAEGYKESPVENVTLKNVVIEKADSIYLLK 457
Query: 425 WNCTDITGISSGVTPKPCELLPD 447
N + I++ + K E + +
Sbjct: 458 -NIKNFNFINTYINEKKVESIKN 479
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 200/429 (46%), Gaps = 53/429 (12%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+ A+ A + E G NT+ I+ L++ GG LF P G +LT S
Sbjct: 13 FVALQVFAERVDMREAGVDNQEALKNTEIINNTINRLNK---AGGGTLFFPSGDYLTASI 69
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
++ S+ TL L A L S + ++ P +E R + LI+ T+ ++ I
Sbjct: 70 HMKSNITLELEAGATLRFSDNFDDYMPFVEM-----RHEGVMMKSFQPLIYATDAENITI 124
Query: 162 TGDNGTIDGQGELWWRKF-----------------------RAGELK------------- 185
G+ G +DGQG+ WW++F +A ++K
Sbjct: 125 KGE-GKLDGQGKAWWKEFFRVLIDLRDNGKRDINKYQPLFEQANDMKTLYAETNVDWHST 183
Query: 186 ----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
+ RP I+ + +N++I +T++NSP W V+P + +V V+G+TI V SPNTDG
Sbjct: 184 LDRRFLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDG 242
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
INP+SC+N I DC+I GDDC+ +KSG D G P + + I T +S V+ +
Sbjct: 243 INPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGGVV-I 301
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
GSEMSGG++ V + ++ G+RIK+ GRGG V+D+ V + M +K +
Sbjct: 302 GSEMSGGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLK 361
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
S PV +NI + +++G+ P GI ++ + K +
Sbjct: 362 YSQMKMEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDIYVN-DAKEE 420
Query: 422 KLQWNCTDI 430
L +C D+
Sbjct: 421 CLFRDCKDL 429
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 189/365 (51%), Gaps = 25/365 (6%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A + ID L +GG ++ G++ TG+ L S+ L L A L+ S D K++P
Sbjct: 18 TEAIQEKIDEL---HQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG--ELKY 186
V+ R + Y+S ++ N ++ +TG G +DGQG+ WW+ FR +L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP LI Q I + ++ L++SPSW V+P+ ++ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N RI +C+I GDDC+A+KSG + + + + I + AV+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED--TKERVACENITIVNCHMLHGHGAVV-LGSEMS 245
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP- 365
G I++V + D++ GVR+K+ GRGG ++D+ V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 366 -------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
D N P P + I++ ++ A NV AA + G+A + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 416 LTNKP 420
+ P
Sbjct: 366 MAEHP 370
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 193/408 (47%), Gaps = 60/408 (14%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G +T AF+ A LSR + GG +L VPPG +L G L SH + + A + QD
Sbjct: 14 GLRESTDAFREA---LSRIEGAGGGRLHVPPGDYLVGPLRLCSHLEFEVARGARIRFVQD 70
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--- 180
+PV+ + R E Y+ +IF D+ I+G G IDGQG+ WWR +R
Sbjct: 71 PDRYPVV-----FTRWEGVECHAYAPMIFVEGAEDIRISG-GGVIDGQGDAWWRMYRDYR 124
Query: 181 ------------------------------AGELKYTRPYLIEIMYSQNIQISNLTLINS 210
E + RP L+++ S+ + I + L NS
Sbjct: 125 EGRVTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVVIEGIILRNS 184
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
WN H +YS V ++G++ P +PNTDG+N DS N RIEDC GDDC+ +KSG
Sbjct: 185 AFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGDDCLGLKSGI 244
Query: 271 DQYGIAYGMPTKQLIIRRLTCI-SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D+ G G PT+ ++IR CI I GSE++GG+++V D++ G+RIK
Sbjct: 245 DEDGRRVGRPTEHVVIR--GCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQDTDRGIRIK 302
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY--GSHPDNNYDPHAL------------P 375
+ GRGGFV++V V ++ M+ + + Y G P L P
Sbjct: 303 SRRGRGGFVENVMVHQIVMERVLVPLVVNLYYRCGIDPGEEETISRLASLLPLPVDETTP 362
Query: 376 VIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
++NI+ + A V + A L G+ P G+ +S+ + + + ++
Sbjct: 363 AVRNISISQVFATGVKSSAGFLLGLPERPIEGLMLSDYRVVMDEEGQE 410
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 204/425 (48%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADIQGRKLNTALINSTID---RLNAHGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ + +INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M+ + K A + Y P
Sbjct: 313 VKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 189/365 (51%), Gaps = 25/365 (6%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A + ID L +GG ++ G++ TG+ L S+ L L A L+ S D K++P
Sbjct: 18 TEAIQEKIDEL---HQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG--ELKY 186
V+ R + Y+S ++ N ++ +TG G +DGQG+ WW+ FR +L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP LI Q I + ++ L++SPSW V+P+ ++ + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTDGIDPES 188
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N RI +C+I GDDC+A+KSG + + + + I + AV+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED--TKERVACENITIVNCHMLHGHGAVV-LGSEMS 245
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP- 365
G I++V + D++ G+R+K+ GRGG ++D+ V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 366 -------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
D N P P + I++ ++ A NV AA + G+A + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 416 LTNKP 420
+ P
Sbjct: 366 MAEHP 370
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T A +AA+D + EGG ++++PPG + + + T L A L
Sbjct: 12 GIDDDDSLDTAAIQAALDDCA---GEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
QD E+P +E S G D +G + + + ++V ITG+ G IDG G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGSYWWEFV 121
Query: 178 ----------------KFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+ R G + RP L++I +N+ +S +TL NSP WN
Sbjct: 122 SLPPEEYPAELAERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D+ +P A P ++N+++ + AE V A
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSEPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T A +AA+D + EGG ++++PPG + + + T L A L
Sbjct: 12 GIDDDDSLDTAAIQAALDDCA---GEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
QD E+P +E S G D +G + + + +V ITG+ G IDG G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADAENVTITGE-GVIDGGGSYWWEFV 121
Query: 178 ----------------KFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+ R G + RP L++I +N+ +S +TL NSP WN
Sbjct: 122 SLPPEQYPSELTERLEEIRRGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 182 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 241
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D++ +P A P ++N+++ + AE V A
Sbjct: 301 GTVEDLRFDTIAMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 188/365 (51%), Gaps = 25/365 (6%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A + ID L +GG ++ G++ TG+ L S+ L L A L+ S D K++P
Sbjct: 18 TEAIQEKIDEL---HQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG--ELKY 186
V+ R + Y+S ++ N ++ +TG G +DGQG+ WW+ FR +L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP LI Q I + ++ L++SPSW V+P+ + + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N RI +C+I GDDC+A+KSG + + + + I + AV+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED--TKERVACENITIVNCHMLHGHGAVV-LGSEMS 245
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP- 365
G I++V + D++ G+R+K+ GRGG ++D+ V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 366 -------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
D N P P + I++ ++ A NV AA + G+A + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 416 LTNKP 420
+ P
Sbjct: 366 MAEHP 370
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 188/365 (51%), Gaps = 25/365 (6%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A + ID L +GG ++ G++ TG+ L S+ L L A L+ S D K++P
Sbjct: 18 TEAIQEKIDEL---HQQGGGRITFSAGRYPTGALFLKSNIELHLLLGATLVFSDDPKDYP 74
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAG--ELKY 186
V+ R + Y+S ++ N ++ +TG G +DGQG+ WW+ FR +L Y
Sbjct: 75 VV-----VSRWEGVKREVYASCLYAENAENIAVTG-LGMLDGQGQRWWKTFRENREQLAY 128
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP LI Q I + ++ L++SPSW V+P+ + + + I P SPNTDGI+P+S
Sbjct: 129 PRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTDGIDPES 188
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N RI +C+I GDDC+A+KSG + + + + I + AV+ LGSEMS
Sbjct: 189 CKNVRISNCHIDVGDDCIAIKSGTED--TKERVACENITIVNCHMLHGHGAVV-LGSEMS 245
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP- 365
G I++V + D++ G+R+K+ GRGG ++D+ V + M + F + Y P
Sbjct: 246 GDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDNVICPFTLNLYYFCGPK 305
Query: 366 -------DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
D N P P + I++ ++ A NV AA + G+A + I ++ +
Sbjct: 306 GKEKYVWDKNPYPITEETPHFRRIHFANISARNVHAAAGFVYGLAEQFISDITFQDIAVS 365
Query: 416 LTNKP 420
+ P
Sbjct: 366 MAEHP 370
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 196/384 (51%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T A +AA+D + EGG ++++PPG + + + T L A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDCA---GEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW--- 176
QD E+P +E S G D +G + + + ++V ITG+ G IDG G WW
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GVIDGGGSYWWVFV 158
Query: 177 ---------------RKFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+ R+G + RP L++I +N+ +S +TL NSP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D++ P A P ++N+++ + AE V A
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITAEEVESA 397
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 398 AFLAGLPEQRFEGISFTDVDIDAT 421
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 203/425 (47%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADVQGRKLNTALINSTID---RLNAHGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ + +INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M + K A + Y P
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 203/425 (47%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADVQGRKLNTALINSTID---RLNAHGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ + +INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M + K A + Y P
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 32/389 (8%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
+ +FG GDG T +T A +AAI EGG+ +F PPG +L L S+ T+ +
Sbjct: 82 VDVRDFGAKGDGKTLDTFAVQAAIMSCP----EGGTVVF-PPGTYLLTPVFLKSNLTIEI 136
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGR-------DTEGGRYSSLIFGTNLTDVVITGDN 165
KDAVLL + +P++ L S G ++SL+ G + +V I G
Sbjct: 137 QKDAVLLGVSERTLYPILPGLLSSKLGEIYLSSWEGEPAESFASLVTGIGVENVRIIG-Q 195
Query: 166 GTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
G ID WW + + + RP I + +NI I +T+ NSPSW VHP++ +
Sbjct: 196 GVIDANANFDDWWFNPKVKRIAW-RPRSIFLNRCKNILIEGITIRNSPSWTVHPLFCKDL 254
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ + I+ P SPNTDGINP+SC+N I C I GDDCVAVK+G + + +P++
Sbjct: 255 KLLTLNIVNPKNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSEN 314
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
+ IR AV+ +GSEMS G+++V+ + ++++ G+RIKT RGG+V ++ +
Sbjct: 315 IEIRNCLMEHGHGAVV-IGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIEL 373
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNNYDP------------HALPVIQNINYRDMVAENV- 390
+ + M + I Y D YDP P I +I ++++ E+V
Sbjct: 374 KNVQMNGVFVPLAINCFYNCGAD--YDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVK 431
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNK 419
+MAA + G+ I + NV IE++ +
Sbjct: 432 SMAAFVYGLPEKKIEKIYMENVRIEISKE 460
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 193/408 (47%), Gaps = 60/408 (14%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G +T AF+ A LSR ++ GG +L VPPG +L G L SH + + A + QD
Sbjct: 14 GLRESTDAFREA---LSRIEAAGGGRLHVPPGDYLVGPLRLCSHLEFEVARGARIRFVQD 70
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR--- 180
+PV+ + R E Y+ ++F DV I+G G IDGQG WWR +R
Sbjct: 71 PDRYPVV-----FTRWEGVECHAYAPMLFVEGAEDVRISG-GGVIDGQGASWWRMYRDYR 124
Query: 181 ------------------------------AGELKYTRPYLIEIMYSQNIQISNLTLINS 210
E + RP L+++ S+ + I + L NS
Sbjct: 125 EGRLTRFPFSSVEEIARRNAHLSTKASGGGGRESHFLRPPLLQVKDSRRVVIEGIVLRNS 184
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
WN H +YS V ++G++ P +PNTDG+N DS N RIEDC GDDC+ +KSG
Sbjct: 185 AFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIEDCTFDVGDDCLGLKSGI 244
Query: 271 DQYGIAYGMPTKQLIIRRLTCI-SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
D+ G G PT+ ++IR CI I GSE++GG+++V D++ G+RIK
Sbjct: 245 DEDGRRVGRPTEHVVIR--GCIMRRGHGGIVCGSEIAGGVRNVVVTGCIFQDTDRGIRIK 302
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--------------HALP 375
+ GRGGFV++V + ++ M+ + + Y D + P
Sbjct: 303 SRRGRGGFVENVMIHQIVMERVLVPLVVNLYYRCGIDPGEEEIVSRLASLLPLPVDETTP 362
Query: 376 VIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
++NI+ ++A V + A L G+ P G+ +S+ + + + ++
Sbjct: 363 AVRNISISQVLATGVKSSAGFLLGLPERPIEGLVLSDYRVFMDEEGQE 410
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 196/384 (51%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T A +AA+D + EGG ++++PPG + + + T L A L
Sbjct: 49 GIEDDDSLDTAAIQAALDDCA---GEGG-EVYLPPGTYRSAPLRVGDDTTFRLANGAELR 104
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
QD E+P +E S G D +G + + + ++V ITG+ G IDG G WW
Sbjct: 105 FVQDFTEFPTVE---SRWEGWDQDG--FHPCLHVADASNVTITGE-GIIDGGGSYWWEFV 158
Query: 178 ----------------KFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+ R+G + RP L++I +N+ +S +TL NSP WN
Sbjct: 159 SLPPEQYPSELAARLEEIRSGNQQDEVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 218
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 219 HVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEQGR 278
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 279 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 337
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D++ P A P ++N+++ + AE V A
Sbjct: 338 GTVEDLRFDTIIMRRVACPFVINGYYQTDIDSDPKPVTEATPNVRNVDFHHITAEEVESA 397
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 398 AFLAGLPEQRFEGISFTDVDIDAT 421
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 203/425 (47%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADIQGRKLNTALINSTID---RLNANGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ + +INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M + K A + Y P
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 188/368 (51%), Gaps = 33/368 (8%)
Query: 72 FKAAIDHLS---------RFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
F A+ID L+ S+GG + VP G++LTG+ L S+ L L AVL S
Sbjct: 7 FGASIDELNTEAIQQAIDAAASDGGGTVVVPAGEFLTGALFLKSNVELHLSAGAVLKFSD 66
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-- 180
D K++PV+ + R Y+S I+ N+ ++ +TG GT+DG G+ WW FR
Sbjct: 67 DPKDYPVV-----HSRWEGVHRKVYASCIYAQNVENISVTG-FGTLDGNGKKWWHTFRNE 120
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
L Y RP L+ I + ++ LI SPSW ++P+ S+ +TIL P SPNTD
Sbjct: 121 PDNLAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTD 180
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSG-WDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
GI+P+SC N RI + +I GDDC+A+K+G D Y + + + I T + V+
Sbjct: 181 GIDPESCKNVRISNYHIDVGDDCIAIKAGTEDTY---ERIACENITITNCTMVHGHGGVV 237
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF---- 355
LGSEMSG I+++ + +++ G+R+K+ GRGG V+D+ V + M + F
Sbjct: 238 -LGSEMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNL 296
Query: 356 -WITGSYGSHP---DNNYDP--HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGIC 408
+ G G P + P P + I++ ++ A NV +A + G+A I
Sbjct: 297 YYFCGPRGKEPYVWEKTAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEIT 356
Query: 409 ISNVTIEL 416
N+ + +
Sbjct: 357 FDNIDVSM 364
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 203/425 (47%), Gaps = 59/425 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A +++ G G NT + ID R + GG LF P G +LTGS ++ S+ T
Sbjct: 24 AERVDMQQAGADIQGRKLNTTLINSTID---RLNANGGGTLFFPAGTYLTGSIHMKSNIT 80
Query: 110 LFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A L S++ ++ P +E R + LI+ + ++ I G+ GT+
Sbjct: 81 LELEAGATLKFSENFDDFLPYVEV-----RHEGIMMKSFQPLIYAVDAENITIKGE-GTL 134
Query: 169 DGQGELWWRKF-----------------------RAGELK-----------------YTR 188
DGQG+ WW +F + +LK + R
Sbjct: 135 DGQGKAWWTEFFRVLVDLRDNGKRNINKYQPMFEKENDLKALYAETNEDWHGTLDRRFFR 194
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I + +N+++ + +INSP W V+P + +V ++GITI V SPNTDGINP+SC
Sbjct: 195 PPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPESCK 253
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I DC+I GDDC+ +KSG D G+P + + I T +S V+ +GSEMSGG
Sbjct: 254 NVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVV-IGSEMSGG 312
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDN 367
++ V + ++ G+R+K+ GRGG V+D+ V + M + K A + Y P
Sbjct: 313 VKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP-- 370
Query: 368 NYDPHA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P + P +NI + +V + G+ P TGI + +V I+ K + +
Sbjct: 371 -AEPKSDRTPEFRNIYVSGVTVRDVNTPIMVVGLPEAPITGIVMRDVYIQ-NAKQRCVFE 428
Query: 426 NCTDI 430
+C D+
Sbjct: 429 DCKDL 433
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 196/384 (51%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G D + +T A +AA+D + EGG ++++PPG + + + TL L A L
Sbjct: 5 GTDDDDSLDTAAIQAALDDCA---GEGG-EVYLPPGTYRSAPLRVGDDTTLRLANGAELR 60
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
QD E+P +E S G + +G + + + +V ITG+ G IDG G WW
Sbjct: 61 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 114
Query: 178 ----------------KFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+ R+G + RP L++I +N+ +S +TL NSP WN
Sbjct: 115 SVPPEEYPPALAERLAEIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 174
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V V ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 175 HVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 234
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 235 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 293
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D++ +P A P ++N+++ + AE V A
Sbjct: 294 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 353
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 354 AFLAGLPERRFEGISFTDVDIDAT 377
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 202/404 (50%), Gaps = 53/404 (13%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+G G +T A ++AID R + G ++ +P G +LTG+ L SH L LH++A
Sbjct: 58 HYGADEKGEVLSTNAIQSAIDDAHRLK---GGRVVIPKGTFLTGALELKSHVELHLHENA 114
Query: 117 VLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-- 173
+ SQD +++ P++ R E YS LI+ + ++ ITG +GT+DG+G+
Sbjct: 115 YVTFSQDPRDYLPLV-----LTRYEGIELYNYSPLIYAHHAENMAITG-SGTLDGRGDEH 168
Query: 174 LWW-------------------------------RKFRAGELKYTRPYLIEIMYSQNIQI 202
WW R F GE Y R I+ QNI I
Sbjct: 169 HWWPWKYGTNGQPSQDRDRQLLFEMAEKRIPVEERVF--GEGHYLRSSFIQPYQCQNILI 226
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
+T+ +SP W +HPV +VIV+G+ I+ PNTDG+NP+SC N IEDCY +GDD
Sbjct: 227 EGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAI 320
C+A+KSG ++ G G+P++ ++IRR V +GSE+SGG++ V AED + +
Sbjct: 285 CIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHGGV-TIGSEISGGVRYVYAEDNIMDSP 343
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNI 380
+ + +RIKT RGG ++ +Y + T+K++K + + + PH PV+++I
Sbjct: 344 NLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMM--YEEGDAGPHK-PVVRHI 400
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+ + ++ P T + + I+ P L+
Sbjct: 401 EVEGLKSSGGRYGVKIAAYPHSPVTHFKMKDCVIDDVTYPLSLE 444
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 201/405 (49%), Gaps = 55/405 (13%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+G GT +T A ++AID R + G ++ +P G ++TG+ L SH L LH+ A
Sbjct: 58 HYGADAKGTELSTDAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLHEKA 114
Query: 117 VLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-- 173
+ SQ+ K++ P++ R E YS LI+ + ++ ITG GT+DG+G+
Sbjct: 115 YVAFSQNRKDYLPLV-----LTRYEGVELYNYSPLIYAHHAENIAITG-AGTLDGRGDEH 168
Query: 174 LWW-------------------------------RKFRAGELKYTRPYLIEIMYSQNIQI 202
WW R F GE Y R I+ Q + I
Sbjct: 169 HWWPWKYGTNGQPSQDRDRQLLFDMAEKRIPVEERVF--GEGHYLRSSFIQPYQCQQVLI 226
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
+T+ +SP W +HPV S VIV+G+ I+ PNTDG+NP+SC N IEDCY +GDD
Sbjct: 227 EGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDD 284
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
C+A+KSG ++ G G+P++ ++IRR V +GSE+SGG++ + AE+ +DS
Sbjct: 285 CIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGV-TIGSEISGGVRYIYAEN-NVMDS 342
Query: 323 ---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQN 379
+ +RIKT RGG ++ +Y + T+K++K + + + PH PV+++
Sbjct: 343 PNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMM--YEEGDAGPHR-PVVRH 399
Query: 380 INYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
I + + ++ + P T + N I+ P L+
Sbjct: 400 IQVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLSLE 444
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 201/403 (49%), Gaps = 51/403 (12%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+G G +T+A ++AID R + G ++ +P G ++TG+ L SH L LH+ A
Sbjct: 58 HYGADAQGIELSTEAIQSAIDDAHRLK---GGRVLIPEGTFVTGALELKSHVELHLHEKA 114
Query: 117 VLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-- 173
+ SQ+ K++ P++ R E YS LI+ + ++ ITG GT+DG+G+
Sbjct: 115 YVSFSQNPKDYLPLV-----LTRYEGVELYNYSPLIYAHHAENIAITG-AGTLDGRGDEH 168
Query: 174 LWW-----------------------RKFRA------GELKYTRPYLIEIMYSQNIQISN 204
WW K R GE Y R I+ Q + I
Sbjct: 169 HWWPWKYGTNGQPSQERDRQLLFDMAEKRRPVEERVFGEGHYLRSSFIQPYQCQQVLIEG 228
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+T+ +SP W +HPV S VIV+G+ I+ PNTDG+NP+SC N IEDCY +GDDC+
Sbjct: 229 VTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDNGDDCI 286
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-- 322
A+KSG ++ G G+P++ ++IRR V +GSE+SGG++ V AE+ +DS
Sbjct: 287 AIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGV-TIGSEISGGVRYVYAEN-NVMDSPN 344
Query: 323 -ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNIN 381
+ +RIKT RGG ++ +Y + T+K++K + + + PH PV+++I
Sbjct: 345 LDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMM--YEEGDAGPHR-PVVRHIE 401
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+ + ++ + P T + N I+ P L+
Sbjct: 402 VEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVTYPLSLE 444
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 216/438 (49%), Gaps = 69/438 (15%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG V DG T NT AF+ AI + GG ++ VP GK+LTG+ +L ++ L L
Sbjct: 59 NINDFGAVADGKTLNTAAFEKAIQTCTE---NGGGKVLVPNGKYLTGAIHLENNVNLHLE 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A +L S + K++P++ + TE YS LI+ N T+V ITG G ++GQ +
Sbjct: 116 DKAEILFSLNPKDYPIV-----HTSWEGTELMNYSPLIYAKNKTNVAITGK-GILNGQAD 169
Query: 174 L--WW--------------------------------------RKFRAGELKYTRPYLIE 193
WW R F GE +Y RP IE
Sbjct: 170 STNWWIWSGAKMYGWKKGIPSQNDPTNREVLVDMAEKDIPVEQRIF--GEGRYLRPNFIE 227
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+ + ++T+INSP W +HP+ ++++I+ G+T+ + PN DG +P+ N I+
Sbjct: 228 FFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNIVIK 285
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+C +GDDC+A+K+G D G +P+K +I++ I V+ +GSE+S G+ +V
Sbjct: 286 NCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHGGVV-IGSEISAGVNNVF 344
Query: 314 AEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF----WITGSYGSHPD 366
E+ +DS + +RIKT RGG +++V+VR + + T+K YGS
Sbjct: 345 VEN-CVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECVLKLNMFYNVYGSQTG 403
Query: 367 NNYDPHALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
N +PVI+NIN ++ +N + EG P I + NV I+ + L+
Sbjct: 404 N-----FIPVIRNINLENVNVKNGGKYSIWAEGYKESPVENITLKNVKIQKVDSIYLLK- 457
Query: 426 NCTDITGISSGVTPKPCE 443
N +I I++ + K E
Sbjct: 458 NVKNINFINTYINEKKVE 475
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 183/363 (50%), Gaps = 46/363 (12%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG ++ P GK+LTG +L S+ T+F+ A L S + + + P R TE
Sbjct: 57 GGGTVYFPAGKYLTGPIHLKSNITIFIDAGAELHFSDNFDHYLPMVP----SRWEGTEVI 112
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------- 185
+S L + ++ ++ I G G IDG G+ WWR F E+K
Sbjct: 113 NFSPLFYAKDVENIAIVG-RGLIDGHGKNWWR-FSEVEVKKLTEDSKWQKEFKRLNPNVL 170
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
+ RP I+ M +N+QI ++ + NSP W ++P Y +V V GITI P
Sbjct: 171 APDLPGWIERGFLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNP- 229
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
SPNTDGINP+SC N RI +C+I GDDC+ +KSG D+ G +P + I T +
Sbjct: 230 PSPNTDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRG 289
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-W 353
V+ +GSEMSGG++++ + ++ G+RIK+A GRGG V+D+ V + M+ ++
Sbjct: 290 HGGVV-IGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRDQ 348
Query: 354 AFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
A + Y N +P P+ +NI+ D+ A A L G+ P + I +N
Sbjct: 349 AIVLDLQYAK---TNPEPISERTPIFRNIHISDITAS-TNRAGYLNGLEELPISNISFNN 404
Query: 412 VTI 414
V +
Sbjct: 405 VNM 407
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 182/376 (48%), Gaps = 40/376 (10%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVL-LASQD 123
T N + A+D R + GG+ + VP G+W +G+ +L S+ L+L + V+ +S
Sbjct: 8 TEGNQNVIQEAVD---RLPASGGT-VIVPRGEWKSGAIHLKSNVKLYLEEGCVIHFSSCM 63
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR------ 177
E P P + R E YS LI+ + +V I G G +DG G WW
Sbjct: 64 EDYLP-----PVFTRWEGVECYNYSPLIYAADCENVTICG-TGVLDGAGSAWWHWKKLQQ 117
Query: 178 ------------------KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
+ A RP I+ + +++ + + T+ + P W +HPVY
Sbjct: 118 NAADHLIRAESQEIPVEERIFATRKDALRPSFIQFINCKHVTLEDFTIEDGPQWTIHPVY 177
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
V+V+G+T+ PNTDG NPDSC IEDC +GDDC+A+ SG ++ G G
Sbjct: 178 CEDVVVRGVTV--NTKGPNTDGCNPDSCRKVLIEDCTFETGDDCIAINSGMNEDGWRVGR 235
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
P +Q+ ++ I +AV A+GS MSGGI D+ D A +E G+RIK+ GRGG+VK
Sbjct: 236 PCEQIEVKNCRFIGGHAAV-AIGSGMSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVK 294
Query: 340 DVYVRRMTMKTM-KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398
V V RM M + K A ++ +YGS A P + + + + + L G
Sbjct: 295 RVNVERMQMDEIEKEAIEVSMNYGSSTAVPVSQKA-PEFSELRFAHIRGNHAAIGVSLCG 353
Query: 399 IAGDPFTGICISNVTI 414
+ P I + +V+I
Sbjct: 354 LPESPLREITLEDVSI 369
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 206/398 (51%), Gaps = 42/398 (10%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T+A +AA+D + EGG ++++P G +L+ + TL + A L
Sbjct: 35 GIEDDDSLDTEAIQAALDDCA---GEGG-EVYLPSGTYLSAPLRVGDDTTLRVANGAELR 90
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
D +E+P +E S G + +G + ++ + +V ITG+ G +DG G WW
Sbjct: 91 FVGDFREFPTVE---SRWEGWNQDG--FHPCLYVADAENVTITGE-GVVDGGGSHWWDLV 144
Query: 178 -----------KFRAGELKY-----------TRPYLIEIMYSQNIQISNLTLINSPSWNV 215
K R E++ RP L++I +N+ +S +TL NSP WN
Sbjct: 145 ETPEAEFPDDLKERLAEIRSGHRQDDVSTFTVRPPLLQIHECENVTVSGVTLRNSPFWNT 204
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 205 HVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 264
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 265 EVGRPTENVVVTNCTVEHGHGGVV-VGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 323
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F + G Y + D++ P A P ++N+N+ + AE V A
Sbjct: 324 GTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSDPKPVDEATPNVRNVNFHHITAEEVESA 383
Query: 394 ARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
A L G+ F GI ++V I+ T +P ++ TD++
Sbjct: 384 AFLAGLPERRFEGISFTDVDIDAT-RP----FDATDLS 416
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 214/436 (49%), Gaps = 60/436 (13%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEF-----GGVGDGTTSNTKAFKAAIDHLSRFQSE 85
+ +K + +D ++ +A EF G G +T A ++AID R +
Sbjct: 27 QGKKDKETDGIDHVLKQIKAPKFPDREFNVIHYGADNKGIELSTNAIQSAIDDAHRLK-- 84
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
G ++ +P G +LTG+ L S+ L LH++A + SQD +++ P++ R E
Sbjct: 85 -GGRVLIPEGTFLTGALELKSNVELHLHENAYVSFSQDTRDYLPLV-----LTRYEGIEL 138
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQGE--LWW-------------------------- 176
YS LI+ + ++ ITG GT+DG+G+ WW
Sbjct: 139 YNYSPLIYAHHAENIAITG-AGTLDGRGDEHHWWPWKYGTNGQPSQDRDRQLLFEMAEKR 197
Query: 177 -----RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
R F GE Y R I+ QNI I +T+ +SP W VHPV S +VIV+G+ I+
Sbjct: 198 IPVEERVF--GEGHYLRSSFIQPYNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNII 255
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
PNTDG+NP+SC + IEDCY +GDDC+A+KSG ++ G G+P++ ++IRR T
Sbjct: 256 G--HGPNTDGVNPESCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTM 313
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTM 348
V +GSE+SGG++ V AED +DS + +RIKT RGG ++ +Y + +
Sbjct: 314 RDGHGGV-TIGSEISGGVKYVYAED-NVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLV 371
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
K++K + + + PH PV+++I + + ++ + P T
Sbjct: 372 KSLKHEVVCIDMM--YEEGDAGPHR-PVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTHFK 428
Query: 409 ISNVTIELTNKPKKLQ 424
+ + I+ P L+
Sbjct: 429 MKDCVIDDVTYPLSLE 444
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 209/448 (46%), Gaps = 80/448 (17%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ +L++FG +GDG++ T AF AID L++ +GG +L VP G W TG L S+
Sbjct: 46 ANEVNLKDFGAIGDGSSLCTTAFAKAIDALTQ---KGGGKLIVPQGVWFTGPIVLKSNIN 102
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L L K AV+L S D+ +P IE + G DT R S I G +LT+V ITG G ID
Sbjct: 103 LHLEKGAVILFSPDDALYPFIE---TSFEGLDTR--RCQSPISGHHLTNVAITG-QGCID 156
Query: 170 GQGELW------------WRKF--RAGELK------------------------------ 185
G GE W W++ R G K
Sbjct: 157 GNGEYWRPLKKQKVTAAQWKQITSRGGAFKRADYWFPSEGALKADNSANMNVPKTPASEE 216
Query: 186 -------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+ RP +I ++ +N+ ++ + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 217 EWNEIKRFLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQN 276
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ +SC N I + GDD + +KSG D G G+P + +I+ T
Sbjct: 277 GDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGHGGF 336
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKW 353
+ +GSEMSGG+++++ D + ++ G+R K+ GRGG V+++Y+ M+M + +
Sbjct: 337 V-VGSEMSGGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVITF 395
Query: 354 AFWITGSYGSHPDNNYDP------------HALPVIQNINYRDMVAENVTMAARLEGIAG 401
+ G N+ D P +NI+ ++ AA G+
Sbjct: 396 DLYYGGKSAVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGLPE 455
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTD 429
P + I I + +E+ N + + N TD
Sbjct: 456 MPVSNIHIKD--MEVNNAQQGIVINRTD 481
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 195/405 (48%), Gaps = 51/405 (12%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ + G G NT+A AI +R +GG ++ VP G WLTG+ + S L L
Sbjct: 22 IRDHGAHPGGALLNTRAIADAIQACAR---QGGGRVVVPSGIWLTGAIHFRSRIDLHLEA 78
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGG----RYSSLIFGTNLTDVVITGDNGTIDG 170
A L SQ+ ++ LP R GG YS ++ D+ ITG G ++G
Sbjct: 79 GAELRFSQNPDDY-----LPPVLSQR---GGVMIYNYSPFLYAHRCEDISITG-AGLLNG 129
Query: 171 QGELWW---------------------------RKFRAGELKYTRPYLIEIMYSQNIQIS 203
QG+ WW R F E RP + + + + I
Sbjct: 130 QGQSWWPWKHSQPGMSSIQGPDNFAALRTPLEERVFGTREAG-VRPVFCQPIECKRVLIE 188
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVT--SPNTDGINPDSCTNTRIEDCYIVSGD 261
+T +SPSW + PV+ + + ++ TIL P + S NTDGI+PD+C N IE C + +GD
Sbjct: 189 GVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVVDTGD 248
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
D + +K+G D+ G+P + ++IR S I +GSEMS G++++ A D T
Sbjct: 249 DAICIKAGRDEDAWEAGIPCENILIRHCEIRSGHGG-ITIGSEMSAGVRNLHAHDCTCDG 307
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL---PVI 377
+++ +RIKT GRGGF+KD+ + +T + ++ A +T YG + DP L P +
Sbjct: 308 TDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTLEKPPDPKNLKHVPAV 367
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKK 422
+NI R++ ++ A L G+ G P + + N+ I P +
Sbjct: 368 ENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNPLR 412
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 196/398 (49%), Gaps = 32/398 (8%)
Query: 29 GVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS 88
G+ S A S +C HS +G GDG + +T A + AID ++ GG
Sbjct: 14 GIASLLAVPSAHAAPGMTTCNPHS-----YGAKGDGVSKDTAAIQHAIDACAK---RGGG 65
Query: 89 QLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYS 148
+ + PG +L+ L S+ TL L K A LL S D ++P I + GR
Sbjct: 66 TVLLTPGTYLSAPIVLKSNITLKLEKGATLLGSPDFNDYPAITEFRAPGR---------Q 116
Query: 149 SLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE------LKYTRPYLIEIMYSQNIQI 202
SLI N +++ I G GTI+G G WW+ R + +YTRP LI + +++ +
Sbjct: 117 SLISAQNASNITIEGA-GTINGNGASWWKMAREHKDTGVMGSQYTRPRLIVFNHCKHVVL 175
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
+T+ NSP W + P YS VI++ I +LAP +PNTD I+P S ++ IE GDD
Sbjct: 176 EGVTVENSPMWQIVPYYSDDVIIRNIHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDD 235
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
+A+KSG + P+ + IR CI +++GSE++GG Q + AE+IT +
Sbjct: 236 DIAIKSG-EANSPGPDAPSTYITIR--DCIFLHGHGLSVGSEIAGGAQHILAENITMTGT 292
Query: 323 ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT----GSYGSHPDNNYDPHAL-PVI 377
++G+R+K RG V D+ + + M +K A I+ Y PDN L P
Sbjct: 293 DNGIRVKANRDRGNDVSDLVFKNIQMTNVKNALIISEFYPHIYPPMPDNPAPITRLTPHF 352
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
NI ++ A N A + G+ P + + NV+I+
Sbjct: 353 HNITVENVTATNSKNAGAIAGLPEAPIRDVVLKNVSID 390
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 200/411 (48%), Gaps = 48/411 (11%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
F S + ++ + GG +G T+A ++AID + GG LF P G +LTG
Sbjct: 16 FSQSLTAANPGWTNILDVGGNNEGQLC-TEAIQSAIDKAAE---AGGGTLFFPAGDYLTG 71
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
+ ++ S+ TL L AVL S + + P ++ R T +S LI+ ++
Sbjct: 72 AIHMKSNTTLHLDAGAVLRFSTNFDHYLPFVQ-----MRWEGTVMNNFSPLIYAYEAENI 126
Query: 160 VITGDNGTIDGQGELWWRK-FRAGE---------------------------------LK 185
ITG G IDGQG+ WW + +R E LK
Sbjct: 127 TITG-RGKIDGQGKDWWMEMYRIHEAAPETLEESKYQKMWTAANEGLETSPNYQKTMRLK 185
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
+ RP LI+ +N++I +T++NSP W V+P + +V + G+TI P SPNTDGINP
Sbjct: 186 FFRPPLIQPFRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENP-PSPNTDGINPT 244
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
SC N I D +I GDDC+ +KSG D G + PT+ + I T +S V+ +GSE+
Sbjct: 245 SCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHGGVV-IGSEV 303
Query: 306 SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSH 364
SG I+ V + ++ G+R+K A GRGG V+++ V + MK ++ A + Y +
Sbjct: 304 SGSIRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVMKDIQLEAIVMNLFYDKN 363
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P +NI+ ++ + +A ++ GI P I SN+ ++
Sbjct: 364 TKEGPVTEETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINMD 414
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 177/329 (53%), Gaps = 27/329 (8%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ +FG GDG T +T +AAI + G ++F P G +LTG L S+ TL L
Sbjct: 85 VNVRDFGAKGDGKTIDTSFIQAAI-----YSCPEGGRVFFPGGIYLTGPIFLKSNITLEL 139
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY------------SSLIFGTNLTDVV 160
KDAVLL + D +P+ LP+ + ++++ Y +SLI G N+ +V
Sbjct: 140 SKDAVLLGANDRNLYPI---LPNTIKSQNSDEELYLATWEGEAAECFASLITGINIENVN 196
Query: 161 ITGDNGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
I G+ GTIDG E WW++ + + + RP + + +NI I +T+ NSP+W +HP
Sbjct: 197 IIGE-GTIDGNANFETWWKEHKIKKGAW-RPRTVFLNQCKNILIEGVTIKNSPAWTIHPF 254
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
S ++ +TI P SPNTDG+NP++ N I C GDDC+A+K+G G
Sbjct: 255 QSENLKFINLTIENPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLG 314
Query: 279 MPTKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
T+++ +R C + + +GSEMSGG+++V E +++ G+RIKT GRGGF
Sbjct: 315 KLTEKVFVR--NCYMEYGHGGVVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGF 372
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPD 366
+ +++ ++ M +K F I Y D
Sbjct: 373 IDEIHADKIRMNRVKTPFTINSFYFCDVD 401
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 37/384 (9%)
Query: 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLL 119
G+ D + +T A +AA+D + G ++++PPG + + + T L A L
Sbjct: 12 GIDDDGSLDTAAIQAALDDCAGT----GGEVYLPPGTYRSAPLRVGDDTTFRLANGAELR 67
Query: 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR-- 177
QD E+P +E S G + +G + + + +V ITG+ G IDG G WW
Sbjct: 68 FVQDFTEFPTVE---SRWEGWNQDG--FHPCLHVADAANVTITGE-GVIDGGGSYWWEFV 121
Query: 178 ----------------KFRAGELK------YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
R+G + RP L++I +N+ +S +TL NSP WN
Sbjct: 122 SVPPEQYPSELTERLEAIRSGNKQDAVSTFTVRPPLLQIDGCENVTVSGVTLRNSPFWNT 181
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
H VYS V + ++I P +PN DGI+ DS R+ D +I +GDD + +KSG D+ G
Sbjct: 182 HVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSSRFVRVSDTHIDAGDDAICLKSGKDEEGR 241
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G PT+ +++ T V+ +GSE +G ++ V + T D++ G+RIK+ GRG
Sbjct: 242 EVGRPTENVVVTNCTVEHGHGGVV-IGSETAGDVRHVTVTNCTFTDTDRGIRIKSKRGRG 300
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMA 393
G V+D+ + M+ + F I G Y + D++ +P A P ++N+++ + AE V A
Sbjct: 301 GTVEDLRFDTIVMRRVACPFVINGYYQTDIDSDPEPVTEATPNVRNVDFHHITAEEVESA 360
Query: 394 ARLEGIAGDPFTGICISNVTIELT 417
A L G+ F GI ++V I+ T
Sbjct: 361 AFLAGLPEQRFEGISFTDVDIDAT 384
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 204/405 (50%), Gaps = 48/405 (11%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ +L E G G S T AF AID L+ ++GG L VP G+WLTG L SH L
Sbjct: 18 ATNLLEHGAQEGGIQSCTTAFANAIDTLA---AQGGGTLTVPAGRWLTGPICLRSHIRLH 74
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L A ++ S++ ++ +P P + L++ + T + ITG GT DGQ
Sbjct: 75 LETGAHVVFSREHADY---QP-PVLAHRAGCWVMNFHPLLYARDATHIAITG-RGTFDGQ 129
Query: 172 GELWW-----------------RKFRAGELKY------TRPYLIEIMYSQNIQISNLTLI 208
G+ WW R+ E + RP ++E + +++ I N+TL
Sbjct: 130 GDAWWEWKKNEDGVRRLIDMVARRVPIAERIFGTVADCVRPNMLEFINCRDVLIENVTLR 189
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP++ VHPV +V ++G++IL PN DGI+P+ C N IEDC + +GDDC+ +KS
Sbjct: 190 DSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYCRNVLIEDCLVDTGDDCICLKS 247
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G DQ G A PT+ +I+RR+ ++ LGSE+S GI++V ED +E G+RI
Sbjct: 248 GRDQDGWAENRPTENVIVRRIRTRRGHGGIV-LGSELSSGIRNVLVEDCDFSGTERGIRI 306
Query: 329 KTAVGRGGFVKDVYVRRMTMK-TMKWAFWITGSYGS---------HPDNNYDPHALPVIQ 378
K+A GRGGFV+++++R + M + A I YGS N P + +
Sbjct: 307 KSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKGQVGSAFQSNTPSPTRM---R 363
Query: 379 NINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
NI D+ + A + G A P I + N+ + T +P L
Sbjct: 364 NILIEDVTCASAGKALDITGDAALPPESITLRNLRLHAT-RPATL 407
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 215/438 (49%), Gaps = 69/438 (15%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG V DG T NT AF+ AI + + GG ++ VP GK+LTG+ +L S+ L L
Sbjct: 72 NINDFGAVADGKTLNTLAFQKAIQECA---ANGGGRVLVPNGKYLTGAIHLESNVNLHLE 128
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A +L S + K++P++ + TE YS LI+ N T++ ITG GT++GQ +
Sbjct: 129 DHAEILFSLNPKDYPIV-----HTSWEGTEVMNYSPLIYAKNKTNIAITGK-GTLNGQAD 182
Query: 174 L--WW--------------------------------------RKFRAGELKYTRPYLIE 193
WW R F G+ +Y RP IE
Sbjct: 183 STNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGIPVSERVF--GDGRYLRPNFIE 240
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+ ++ +INSP W +HP+ ++++I+ G+T+ + PN DG +P+ N I
Sbjct: 241 FFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCDPEYSQNILIR 298
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+C +GDDC+A+K+G D G +P+K +I++ I V+ +GSE+S G+ +V
Sbjct: 299 NCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHGGVV-IGSEISAGVNNVF 357
Query: 314 AEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF----WITGSYGSHPD 366
E+ +DS + +RIKT RGG ++++YVR + + T+K YGS
Sbjct: 358 VEN-CVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMFYNVYGSQTG 416
Query: 367 NNYDPHALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
N +P I+N++ ++ +N + EG A P I + NV I+ + L+
Sbjct: 417 N-----FIPTIRNVSLENVTVKNGGKYSVWAEGYAESPVENITLKNVKIQKVDSLYLLK- 470
Query: 426 NCTDITGISSGVTPKPCE 443
N +I I++ + K E
Sbjct: 471 NVKNINFINTYINEKKVE 488
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 200/397 (50%), Gaps = 36/397 (9%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + EFG VGDG T NT A + AI + S + + G +LTG L S+ T
Sbjct: 79 AFILDIREFGAVGDGKTVNTFAIQTAI-----LSAPENSIIEIRDGNYLTGPVLLKSNIT 133
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPS----------YGRGRDTEGGRYSSLIFGTNLTDV 159
+ + +A L A ++ + +P+ LP+ G ++SL G ++ +V
Sbjct: 134 INIAGNARLTALKEREMYPI---LPASINKADRTFYLGSWEGEPAACFASLFTGVSVNNV 190
Query: 160 VITGDNGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
ITG+ GTIDG E WW+ + + + RP I + NI I + + NSPSW +HP
Sbjct: 191 NITGE-GTIDGNSDRETWWKDAKIKRISW-RPRTIFLTDCSNINIVGINIENSPSWTLHP 248
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
V+SS++ + I P SPNTDGI+P+SC N I GDDC+A+KSG + G
Sbjct: 249 VFSSNLGFFDMKIRNPKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREI 308
Query: 278 GMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
G+P++ + I C F + +GSEMSGGI++V ++ +++ G+RIKT GRGG
Sbjct: 309 GIPSENINIE--NCHMEFGHGGVVIGSEMSGGIKNVNIKNCLFENTDRGLRIKTRRGRGG 366
Query: 337 FVKDVYVRRMTMKTMKWAFWITGSYGSHPDN------NYDPHAL----PVIQNINYRDMV 386
+ ++ + M + F I Y D N D + PVI+NI +++MV
Sbjct: 367 IIDGIHAENIVMDKVLTPFVINEFYYCDSDGKTEYVWNKDKLEITEETPVIKNITFKNMV 426
Query: 387 AENVTM-AARLEGIAGDPFTGICISNVTIELTNKPKK 422
+N + A + G+ + + N+TI+ P++
Sbjct: 427 CKNSEVCAGFMYGLPERKIERVVLENLTIDFAEDPRR 463
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 165/327 (50%), Gaps = 41/327 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L+ FG DG +N AF A+ S GG L VP G W TG L + TL L
Sbjct: 5 NLKNFGAKADGIYNNAAAFAEAV---SVLHEAGGGTLTVPAGIWKTGPIRLCAKMTLHLA 61
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ AVL D + +P P Y R E + ++ + V +TG G IDG G+
Sbjct: 62 EGAVLRFIPDPELYP-----PVYTRWEGVECYAMQACLYCADSDSVTVTG-KGVIDGSGD 115
Query: 174 LWW----RKFRAG---------------------------ELKYTRPYLIEIMYSQNIQI 202
WW +K G E+++ RP L++ N+++
Sbjct: 116 TWWDLRWQKADQGGPKSPIECKLAALNPGYRSQPGGGGGREVQFLRPALVQFYNCTNVRL 175
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
+TL NSP W VHPVY +++V+GITI P +PNTDGI+ DSCTN +I DC + GDD
Sbjct: 176 EQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGIDIDSCTNVQIVDCEVSVGDD 235
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
+A+KSG + GI PT+ + +R T ++ +GSE + GI+ V AE+ +
Sbjct: 236 GIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMV-IGSETAAGIRHVLAENCRFPGT 294
Query: 323 ESGVRIKTAVGRGGFVKDVYVRRMTMK 349
+ GVRIK+ GRGG + DV +R + M+
Sbjct: 295 DRGVRIKSRRGRGGEIYDVKLRNLVME 321
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 201/398 (50%), Gaps = 61/398 (15%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +G VGDG T NT+AF+ AI R GG ++ VP G++LTG+ L S L + +
Sbjct: 67 ITRYGAVGDGVTKNTRAFRDAIRACHR---AGGGRVVVPRGRFLTGAIQLRSQVELHVRE 123
Query: 115 DAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+L S D +++ P++ + R TE YSS I+ D+ ITG GT+DGQG
Sbjct: 124 GGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAITG-RGTLDGQGM 177
Query: 174 LW-WRKFRA---------------------------GELKYTRPYLIEIMYSQNIQISNL 205
W+ +R G+ + RP +I+ +NI + ++
Sbjct: 178 AGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQDI 237
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T++ P W +HPV +V ++ + ++ + N+DG++P+ ++ I C + DD +A
Sbjct: 238 TVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSIA 295
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV---IALGSEMSGGIQDVRAED--ITAI 320
VKSG D+ G G+P++ ++IR C+ FS +A+GSEMSGG++DV AED I +
Sbjct: 296 VKSGRDEDGHRIGVPSRNIVIR--DCV--FSGRWGGVAVGSEMSGGVRDVFAEDCRINPV 351
Query: 321 D------SESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDNNYDPHA 373
D V IKT RGG + VY+RR T + + + ++T Y
Sbjct: 352 DFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQGER----- 406
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
VI++I DMV + A LEG+ DPFTG+ I+
Sbjct: 407 PAVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 444
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 198/396 (50%), Gaps = 55/396 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +G VGDG T NT+AF+ AI R GG ++ VP G++LTG+ L S L +
Sbjct: 51 DITRYGAVGDGVTKNTRAFRDAIRACHR---AGGGRVVVPRGRFLTGAIQLRSQVELHVR 107
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ +L S D +++ P++ + R TE YSS I+ D+ ITG GT+DGQG
Sbjct: 108 EGGTVLFSTDPRDYLPMV-----FTRWEGTECWNYSSFIYARGQQDLAITG-RGTLDGQG 161
Query: 173 ELW-WRKFRA---------------------------GELKYTRPYLIEIMYSQNIQISN 204
W+ +R G+ + RP +I+ +NI + +
Sbjct: 162 MAGPWKSWRDPGGNALVDQAELRRMGTEGVPVDQRLFGDGHHLRPNMIQFYDCRNILMQD 221
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+T++ P W +HPV +V ++ + ++ + N+DG++P+ ++ I C + DD +
Sbjct: 222 ITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECTSDMLITGCRFHTEDDSI 279
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAID- 321
AVKSG D+ G G+P++ ++IR + V A+GSEMSGG++DV AED I +D
Sbjct: 280 AVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGV-AVGSEMSGGVRDVFAEDCRINPVDF 338
Query: 322 -----SESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDNNYDPHALP 375
V IKT RGG + VY+RR T + + + ++T Y
Sbjct: 339 PGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTTRYAGQQGER-----PA 393
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
VI++I DMV + A LEG+ DPFTG+ I+
Sbjct: 394 VIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIAR 429
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 208/413 (50%), Gaps = 55/413 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ ++G VGDGTT NT+A K AI GG ++ +P GK+LTG +L S+ L L
Sbjct: 50 SIMDYGAVGDGTTDNTQAIKDAIQACVE---AGGGKVVIPAGKFLTGPIHLKSNVNLHLE 106
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K++ ++ ++D++ + PV+ SY E YS LI+ ++ +TG +GT +GQ
Sbjct: 107 KNSEVIFTKDKQAYLPVVRT--SY---EGVELMNYSPLIYAYQQKNIAVTG-SGTFNGQA 160
Query: 173 --ELWW--------------------------RKFRA----------GELKYTRPYLIEI 194
E WW RK GE + RP E
Sbjct: 161 GKENWWPWSGAERYGHKKGDPHQRDSINLPRLRKMNEDATPVSERIFGEGHHLRPTFFEP 220
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
S+N+ I +T IN+P W +HP+ ++V V G+ +++ PN DG NP+ N I +
Sbjct: 221 FESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYSKNVHITN 278
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD--V 312
C +GDDC+A+KSG + G G+ ++ +++ V+ +GSE+S G+++ V
Sbjct: 279 CVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHGGVV-MGSEISAGVRNVYV 337
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
R + + + + +RIKT RGGFV++V+V+ + + +K AF +Y + DN H
Sbjct: 338 RNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIYDNQEGEH 397
Query: 373 ALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+P I+NI+ ++ E+ ++G +P + NVTI+ P +++
Sbjct: 398 -IPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVTIKKAEMPMRVE 449
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 204/409 (49%), Gaps = 56/409 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L EFGG + NT AFK AI S+ GG ++ VP G++ TG+ +L S+ L +
Sbjct: 54 NLLEFGG--KEGSDNTLAFKKAIAACSK---AGGGKVVVPAGRFETGAIHLESNVNLHIS 108
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A + D K + LP+ + R E YS LI+ T++ ITG GT+DGQ
Sbjct: 109 EGATIAFFTDPKYY-----LPAVFTRWEGMECMGYSPLIYAYGKTNIAITGK-GTLDGQA 162
Query: 173 E--LWW---------------------------------RKFRAGELKYTRPYLIEIMYS 197
+ WW R+ + Y RP ++
Sbjct: 163 DPTHWWAWKGNKEWGVEGYPSQKESRNQLFAQAEAGDPVRERVYADGHYLRPSFVQPYKC 222
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+N+ I ++T+IN+P W +HP S +V V+G+ + + PN+DG +P+SC N IE+C+
Sbjct: 223 ENVLIEDITIINAPFWLLHPTLSQNVTVRGVHLES--LGPNSDGCDPESCKNVVIENCFF 280
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED- 316
+GDDC+A+KSG + G PT+ +IIR + V+ +GSE+SGG+++V AE+
Sbjct: 281 NTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHGGVV-IGSEISGGVRNVFAENN 339
Query: 317 -ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALP 375
+++ D E G+RIKT RGG ++++YVR T+ ++ A I Y +D P
Sbjct: 340 VMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEGDAGKFD----P 395
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
++N+ R++V ++ + G P I + T + P ++
Sbjct: 396 TVRNVEIRNLVCQHALQVFNIRGFERAPIQNFRIIDSTFVRGDNPGVIE 444
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 33/368 (8%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG +T +AAI R S++ +P G + S L H T+
Sbjct: 79 YTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTM 133
Query: 111 FLHKDAVLLASQDEKEWPVI---------EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L K AVL A + + + ++ E G ++ ++ G + DV I
Sbjct: 134 ELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTI 193
Query: 162 TGDNGTIDGQG--ELWWRKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
G+ GTIDG E WW A E++ RP +I + +++ I+ +T+ NSPSWN+HP
Sbjct: 194 CGE-GTIDGNASWENWW--LDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPY 250
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ S + G+T+L P SPNTDG+NP+SC + I C GDDC+AVK+G G Y
Sbjct: 251 FCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYK 310
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--G 336
+P+ + IR+ C+ I LGSEM+ GI++++A ++++ G+RIKT GRG
Sbjct: 311 VPSSNIRIRQ-CCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRGKDA 369
Query: 337 FVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN------YDPHAL----PVIQNINYRDMV 386
+ + + M ++ F I Y PD + +P A+ P I+ + +R++
Sbjct: 370 VIDGILFEDIRMDSVLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKELCFRNIQ 429
Query: 387 AENVTMAA 394
A+N +AA
Sbjct: 430 AKNCHVAA 437
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 198/413 (47%), Gaps = 53/413 (12%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
++ EFG GD T NT++ +AI R GG L++P G +LTG +L S+ T+++
Sbjct: 3 CNITEFGAKGDSNTDNTESISSAI---KRCADSGGGTLYIPAGTYLTGPISLISNLTIYI 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
A L+ D +P P+ + G + G +S L++G LT+V I G +G IDGQG
Sbjct: 60 ESGAKLVFIDDFSAYP---PVKTRWSGYECYG--FSPLLYGNGLTNVSIIG-SGCIDGQG 113
Query: 173 ELWW---RKFRAGEL-----------------------------KYTRPYLIEIMYSQNI 200
E WW R GE ++ RP L+++ ++
Sbjct: 114 EAWWEVNHLLRKGEEYDHPQTKEIAELNKSITEPKNTNLVEWPSQFLRPPLLQMYDCDSV 173
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
+ +TL NSP WN H VY +V + + P +PN DG++ DSC+N R+ +C+ G
Sbjct: 174 TLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVSNCHFDVG 233
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DDC+A KSG ++ G PT+ + + T + ++ +GSE SGGI+++ + I
Sbjct: 234 DDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGGIV-MGSENSGGIRNIAVSNCVFI 292
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPD------NNYDP--- 371
++ G+R+KT RG +++D+ + + M + I Y D N P
Sbjct: 293 GTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLDKSDSLINELSPIEI 352
Query: 372 -HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIELTNKPKK 422
P I+ I+ ++ A N AA + G+ I + +V IE+T P +
Sbjct: 353 SEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLIEMTINPDE 405
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 195/392 (49%), Gaps = 46/392 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D + T+A K AID S+ GG ++ P GK+LTG+ +L S+ T+F+ A
Sbjct: 45 KYGARNDSSKLATQAIKKAIDAASK---AGGGTVYFPAGKYLTGAIHLKSNITIFIDAGA 101
Query: 117 VLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
L S + ++ P+++ R + +S L + ++ ITG G IDG G+ W
Sbjct: 102 ELHFSDNFDDYLPMVK-----SRYEGVDVTSFSPLFYAYKAENIAITG-RGIIDGHGKKW 155
Query: 176 W---RKFRAGELK--------------------------YTRPYLIEIMYSQNIQISNLT 206
W ++A + + + RP I+ MY +N+ I +T
Sbjct: 156 WDFVEGYKADQPRSKWQYMFDDLNREILLPDDPKQMKRGFLRPPFIQTMYCKNVFIEGIT 215
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ NSP W V+P + +V + +TI P + +PNTDGINP+SC N I +C+I GDDC+
Sbjct: 216 IRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPESCNNVHISNCHISVGDDCIT 275
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSG D G P + I T +S V+ +GSEMSG ++ + + ++ G
Sbjct: 276 IKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGVV-IGSEMSGDVRKISISNCVFDGTDRG 334
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--HALPVIQNINYR 383
+RIK+A GRGG V+++ V + MK +K + + +P P +NI++
Sbjct: 335 IRIKSARGRGGIVEEIRVDNIIMKNIKQQAIVLDL--QYAKTTLEPVSERTPRFRNIHFS 392
Query: 384 DMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
++ + V AA L G+ P I +++ +E
Sbjct: 393 NITGQ-VNEAAYLNGLEEMPIENISFNDINME 423
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 198/392 (50%), Gaps = 32/392 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG G+G +T A + AI ++ VP G++ S L S TL L
Sbjct: 87 NVKDFGAYGNGEHDDTNAIQCAI-----MSCPKAGRILVPAGEYKISSIFLKSDITLDLA 141
Query: 114 KDAVLLASQDEKEWPVIE-PLPSYGRGRDTEGGR--------YSSLIFGTNLTDVVITGD 164
K AVL A + +++P++ + SY + G +S+++ G N+ +VVITG+
Sbjct: 142 KGAVLSAFTEREKFPILPGVIESYDETDEYNLGSWEGNPLDCFSAIVCGINVENVVITGE 201
Query: 165 NGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
GTIDG WW + + + RP L I + +N+ + +T+ NSPSW +HP +S
Sbjct: 202 -GTIDGNAGFDNWWYNVKVRNIAW-RPRLFFINHCRNVTMHGITVQNSPSWTLHPYFSDH 259
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
+ + I P S NTDG++P+SCT+ R+ YI GDDC+A+KSG G + +PT
Sbjct: 260 LKFIDVKIKNPANSHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPTS 319
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
+ +R+ C+ + +GSE++ G++DV D ++++ G+R+KT GRG + D
Sbjct: 320 DMEVRQ-CCMRDGHGAVTVGSEIAAGVKDVHIRDCIFMNTDRGLRVKTRRGRGRDSVLDD 378
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV------IQNINYRDMVAENV 390
+ +TM + F + Y PD + ALPV I+ + ++D+ A N
Sbjct: 379 ISFENITMDNVMTPFVVNSFYFCDPDGKTEYVATSKALPVDDRTPAIKRLTFKDIKATNC 438
Query: 391 TMA-ARLEGIAGDPFTGICISNVTIELTNKPK 421
+A A + G+ + NV I + K
Sbjct: 439 HVAGAYICGLPESKIERLTFENVDISYADDAK 470
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 202/403 (50%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GDG T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ R E YS L++ + +V ITG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 135
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + + +INSP W VHPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 253
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + + + I Y +N +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 368
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ IE
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 411
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 193/419 (46%), Gaps = 54/419 (12%)
Query: 40 WFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
W +A++ A + ++ G G T AID + +EGG ++ P G +LT
Sbjct: 13 WCLSTAVT-HARTFDMKRLGADLTGIKPCTDLINRAIDEAA---AEGGGTIYFPAGTYLT 68
Query: 100 GSFNLTSHFTLFLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTD 158
+ + S+ TL + A L + + E P ++ R T S LI+ N +
Sbjct: 69 ATIRMKSNITLDIESGATLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYADNADN 123
Query: 159 VVITGDNGTIDGQGELWWR---------KFRAGEL------------------------- 184
+ ITG GT+DG G WW K G+L
Sbjct: 124 LTITG-RGTLDGNGFKWWAWEVDTRRLIKENGGKLPSLNKLQQMWVDANKDLEISDYYKP 182
Query: 185 ----KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP--- 237
+ RP I+ NI I N+ +INSP W ++P + ++ V G+TI P +P
Sbjct: 183 SLERRMFRPPFIQFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGP 242
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
NTDGINP SC+N RI DC+I GDDC+ +KSG D G YG P + L I +S
Sbjct: 243 NTDGINPTSCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGHGG 302
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFW 356
V+ +GSEMSGG++ V + +++G+R+K + GRGG V+D+ V + MK + + AF
Sbjct: 303 VV-IGSEMSGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNIGRNAFI 361
Query: 357 ITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
Y PV +NI+ ++ +V ++GI P + SN+ +E
Sbjct: 362 FDLFYDKLSKPEPVSERTPVFRNIHLSNITGSDVKQIGYIKGIEEMPINELSFSNINME 420
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 202/403 (50%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GDG T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ R E YS L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 133
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + + +INSP W VHPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + + + I Y +N +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ IE
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 409
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 195/414 (47%), Gaps = 53/414 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A++ + + +++E G G S T+ I+ S SEGG ++ P G +LT + ++
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCTELINQTIEKAS---SEGGGTIYFPAGVYLTATIHM 70
Query: 105 TSHFTLFLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL++ AVL + + E P ++ R T S LI+ + ++ ITG
Sbjct: 71 KSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT+DG G WW K G+L +
Sbjct: 126 -RGTLDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERR 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ N+ I N+ ++NSP W ++P + +V V G+TI P P NTDGI
Sbjct: 185 MFRPPFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ V + +SG+R+K++ GRGG V+++ V + MK ++ AF Y
Sbjct: 304 SEMSGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
PV +NI+ ++ ++ ++GI P G+ SN+ ++
Sbjct: 364 DKESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 53/414 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A++ + + +++E G G S T+ I+ S SEGG ++ P G +LT + ++
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCTELINQTIEKAS---SEGGGTIYFPAGVYLTATIHM 70
Query: 105 TSHFTLFLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL++ AVL + + E P ++ R T S LI+ + ++ ITG
Sbjct: 71 KSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT++G G WW K G+L +
Sbjct: 126 -RGTLNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERR 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ N+ I N+ ++NSP W ++P + +V V G+TI P P NTDGI
Sbjct: 185 MFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ V + ++SG+R+K++ GRGG V+++ V + MK ++ AF Y
Sbjct: 304 SEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
PV +NI+ ++ ++ ++GI P G+ SN+ ++
Sbjct: 364 DKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 202/403 (50%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GDG T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 26 REVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 82
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ R E YS L++ + +V ITG +G +DG
Sbjct: 83 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 135
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 136 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 195
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + + +INSP W +HPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 196 YRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 253
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 313
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + + + I Y +N +
Sbjct: 314 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 368
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ IE
Sbjct: 369 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 411
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 204/412 (49%), Gaps = 77/412 (18%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG VGDG+T ++A K+AI + GG ++ VPPG + TG L S+ L L K
Sbjct: 60 ISDFGAVGDGSTDASQAIKSAIQACAE---AGGGKVVVPPGDYPTGPIYLESNVNLHLEK 116
Query: 115 DAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
DA L+ S D K++ P++ Y R E YS L++ ++ ITG+ G +DGQ
Sbjct: 117 DARLMFSTDPKDYLPLV-----YTRWEGVELMNYSPLVYAFEEENIAITGE-GILDGQAN 170
Query: 174 L--WW--------------------------------------RKFRAGELKYTRPYLIE 193
WW RKF GE Y RP ++
Sbjct: 171 ETNWWPWKGKTQYGYTEGDPQQEDADKRHALFQMAEDGVPVEERKF--GEGFYLRPQFVQ 228
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+N+ + + ++NSP W ++PV +V ++G+T+ + PN+DG +P+S N I+
Sbjct: 229 PYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDPESSKNVLIK 286
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCY +GDDC+A+KSG + G +P++ +II+ V+ +GSE+SGG+++V
Sbjct: 287 DCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVV-IGSEISGGVRNVF 345
Query: 314 AE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-------FWITGSYGSH 364
AE ++ + + +RIKT+ RGG ++D+Y+R + + + + +G+Y
Sbjct: 346 AENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNMFYEDSGAY--- 402
Query: 365 PDNNYDPHALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIE 415
+P ++NI+ +M EN + LEG P I + NV I+
Sbjct: 403 ---------VPTVRNIHVENMTVENGGKVGVLLEGYENSPVENITLENVNIK 445
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 53/414 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A++ + + +++E G G S T+ I+ S SEGG ++ P G +LT + ++
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCTELINQTIEKAS---SEGGGTIYFPAGVYLTATIHM 70
Query: 105 TSHFTLFLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL++ AVL + + E P ++ R T S LI+ + ++ ITG
Sbjct: 71 KSNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT++G G WW K G+L +
Sbjct: 126 -RGTLNGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEDLEISDYYKPSLERR 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ N+ I N+ ++NSP W ++P + +V V G+TI P P NTDGI
Sbjct: 185 MFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ V + ++SG+R+K++ GRGG V+++ V + MK ++ AF Y
Sbjct: 304 SEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
PV +NI+ ++ ++ ++GI P G+ SN+ ++
Sbjct: 364 DKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 204/408 (50%), Gaps = 56/408 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG VGDG T NT+AFK AI+ + GG ++ VP GK+LTG L S+ L L
Sbjct: 70 ITDFGAVGDGLTKNTEAFKKAIEAC---HNNGGGRVVVPYGKFLTGGIYLKSNVNLHLAD 126
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG-- 172
A ++ S+D ++P++ + R E Y+S I+ ++ +TG NG +DG
Sbjct: 127 SATIVFSRDSSDYPIV-----FTRWEGMECMNYASFIYAYGEENIAVTG-NGILDGNANN 180
Query: 173 ELWW----------------------------------RKFRAGELKYTRPYLIEIMYSQ 198
+ WW +K G+ Y RP I+ +
Sbjct: 181 DYWWWWCGAKKYGWREELGKQTPARNALHEMMHEEVDPKKRIFGDGHYLRPNFIQPYQCK 240
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
N+ I+++ LINSP WN++PV +V+++ + +++ PN DG +P++C N I DCY
Sbjct: 241 NVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPEACKNVWIRDCYFD 298
Query: 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE--D 316
+GDDC+A+KSG D+ G G P + II V+ +GSE++GG +++ A +
Sbjct: 299 TGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHGGVV-IGSEIAGGAKNIYAINCE 357
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPV 376
+ + + + +RIKT+ RGG +++V+++ + + T K A + P N+ +P
Sbjct: 358 MDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEKPGNH-----IPT 412
Query: 377 IQNINYRDM-VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
I+NI ++ V + A + P T + + N ++ +P K+
Sbjct: 413 IRNIWVENLNVEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKEPFKV 460
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 201/403 (49%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GD T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDRRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ R E YS L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCENVAITG-SGVLDG 133
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + + +INSP W VHPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + M + I Y +N +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRINLRY-----DNEEGE 366
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ IE
Sbjct: 367 YLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIE 409
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 195/414 (47%), Gaps = 53/414 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A++ + + +++E G G S T+ I+ S SEGG ++ P G +LT + +
Sbjct: 14 AVTAWSRTFNMKELGADPRGIESCTELINQTIEKAS---SEGGGTIYFPAGVYLTATIYM 70
Query: 105 TSHFTLFLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
++ TL++ AVL + + E P ++ R T S LI+ + ++ ITG
Sbjct: 71 KNNITLYVESGAVLRFSDRFEDYLPFVKI-----RWEGTVMNTLSPLIYAHDAENLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT+DG G WW K G+L +
Sbjct: 126 -RGTLDGNGFKWWSWEKETRELIKKNGGKLPALNKLQRMWEEANEELEISDYYKPSLERR 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ N+ I N+ ++NSP W ++P + +V V G+TI P P NTDGI
Sbjct: 185 MFRPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ V + ++SG+R+K++ GRGG V+++ V + MK ++ AF Y
Sbjct: 304 SEMSGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
PV +NI+ ++ ++ ++GI P G+ SN+ ++
Sbjct: 364 DKESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMK 417
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 206/417 (49%), Gaps = 58/417 (13%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S + ++G VGDG T NT AF+A I R GG Q+ VP G++LTG+ +L S L
Sbjct: 67 SFRITDYGAVGDGRTMNTAAFRATIAACHR---AGGGQVVVPEGRFLTGAIHLRSRVNLH 123
Query: 112 LHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ A + S D +++ PV+ R TE YS I+ DV +TG GT+DG
Sbjct: 124 VTAGATIAFSPDPRDFLPVV-----LTRWEGTECYNYSPFIYAYGARDVAVTGP-GTLDG 177
Query: 171 QGEL-----WWR-----------------------KFRAGELKYTRPYLIEIMYSQNIQI 202
Q L W+R + G+ RP +++ +N+ +
Sbjct: 178 QARLGPWESWYRDSGPQGADQKLLREMGSTGAPVARRVFGDGHCLRPKMVQFYRCRNVLV 237
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
S+LT+++ P W VHPV SS+V V+G+T+ + T NTDG +P+ C++ I C + DD
Sbjct: 238 SDLTIVDPPMWTVHPVLSSNVTVRGVTVDS--TLYNTDGCDPECCSDVLITGCRFNTNDD 295
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE--DITAI 320
CVAVKSG D+ G G+P++ +++R + + +GSEMSGG++D+ AE +I
Sbjct: 296 CVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWGG-MTVGSEMSGGVRDIFAENCEINPP 354
Query: 321 DSESGVRIKTAV------GRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNNYDPHA 373
D +K A+ RGGF+ V++R T + ++ ++T +Y D
Sbjct: 355 DFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFVTMAYNGGEDGT----- 409
Query: 374 LPV-IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
LPV ++NI+ M + RL G+ D G+ +S T P + CTD
Sbjct: 410 LPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGILNPDSIA--CTD 464
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 191/374 (51%), Gaps = 42/374 (11%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG +T +AAI R S++ +P G + S L H T+
Sbjct: 89 YTLNVRDFGAKGDGVQDDTTYIQAAIMSCPR-----NSRVLIPEGTYRVTSLFLKDHLTM 143
Query: 111 FLHKDAVLLASQDEKEWPVI---------EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L K AVL A + + + ++ E G ++ ++ G + DV I
Sbjct: 144 ELAKGAVLSAYTERERFSILRGTYQSEDQENEYILGTWEGEAQNMFAGIMNGIGIKDVTI 203
Query: 162 TGDNGTIDGQG--ELWWRKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
G+ GTIDG E WW A E++ RP +I + +++ I+ +T+ NSPSWN+HP
Sbjct: 204 CGE-GTIDGNASWENWW--LDAKEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPY 260
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ S + G+T+L P SPNTDG+NP+SC + I C GDDC+AVK+G G Y
Sbjct: 261 FCSHLKFIGVTVLGPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYK 320
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
+P+ + IR+ C+ I LGSEM+ GI++++A ++++ G+RIKT GRG
Sbjct: 321 VPSSNIRIRQ-CCMRDGHGSITLGSEMAAGIKNLQARQCVFLNTDRGLRIKTRRGRG--- 376
Query: 339 KDVY--------VRRMTMKTMKWAFWITGSYGSHPDNN------YDPHAL----PVIQNI 380
KD +R ++ T+ F I Y PD + +P A+ P I+ +
Sbjct: 377 KDAVIDGILFEDIRMDSVLTLLTPFVINSFYFCDPDGHSEYVQCKEPLAVDERTPQIKEL 436
Query: 381 NYRDMVAENVTMAA 394
+R++ A+N +AA
Sbjct: 437 CFRNIQAKNCHVAA 450
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 194/427 (45%), Gaps = 78/427 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S S+ ++G VGDG T NT+AF AI S+ GG ++ +P G WLTG +L S L
Sbjct: 26 RSFSVTDYGAVGDGVTDNTEAFHKAIAACSQ---AGGGRVVIPAGVWLTGPLSLASRLDL 82
Query: 111 FLHKDAVLLASQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
A++L S+ +++P+I E PS R S + G L V ITG G
Sbjct: 83 HAQAGALVLFSRRFEDYPMIFSQYEGQPSI---------RCQSPLDGEGLEHVAITG-AG 132
Query: 167 TIDGQGELW------------WRKF-------------------------RAGELK---- 185
DG G+ W W K + +LK
Sbjct: 133 VFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEDAGMWWPSEAAMNGPAKVAQLKREGS 192
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
Y RP L+ + + + + T NSP+WN+HP V ++G+T+ P
Sbjct: 193 TDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPW 252
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
N DG++ DSC +EDC GDD + +KSG D+ G A G+P + ++IR
Sbjct: 253 YGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHG 312
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----K 349
+ +GSEMSGG++ +R ED T + ++ G+R K+ GRGG V+D+ + R+ M +
Sbjct: 313 HGGFV-IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGE 371
Query: 350 TMKWAFWITGSYGSH-PDNNYDPHAL--PVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
+ + + G GS N P ++ P+ + I RD+ A + G+ P G
Sbjct: 372 AISFHLFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDG 431
Query: 407 ICISNVT 413
+ + N T
Sbjct: 432 LVVENFT 438
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 198/399 (49%), Gaps = 34/399 (8%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ ++ +FG GDG +T ++A+ S++ VP G + S L + +
Sbjct: 92 TLNVRDFGAKGDGIQDDTLFIQSAV-----MACPKDSRVLVPAGTYRIVSLFLKDNVKIE 146
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGG---RYSSLIFGTNLTDVVIT 162
L K AVL A D +PV++ + G+D EG +S+++ G N+ + VI
Sbjct: 147 LEKGAVLSADTDRSRFPVLKGMIKSFDGKDEYNLGTWEGDPLPMFSAVVTGINIENAVIY 206
Query: 163 GDNGTIDGQG----ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
G G I+G E WW + + + RP ++ + +++ I LTL NSPSWN+HP
Sbjct: 207 G-RGVIEGNAGFGEENWWHDPKRMKTAF-RPRMVFLERCKHVVIQGLTLRNSPSWNIHPY 264
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+S + + +L+P SPNTDG++P+SC + I GDDC+AVKSG G Y
Sbjct: 265 FSEHLKFLDLRVLSPKDSPNTDGLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYK 324
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--G 336
P++ +++ R C+ + +GSEM+GG++++ D ++ G+RIKT GRG
Sbjct: 325 RPSEDIVVSR-CCMRDGHGSVTIGSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNA 383
Query: 337 FVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV------IQNINYRDMV 386
V + R+ M +K F I Y PD N + LPV I+++ +RD+
Sbjct: 384 VVDGILFERIHMDQVKTPFVINSFYYCDPDGNSEYVRTKERLPVDDRTPWIKHLTFRDIE 443
Query: 387 AENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKKLQ 424
A N +AA L G+ + + V+I T + +K Q
Sbjct: 444 AVNCHVAAAYLYGLPERKIGKVEMERVSISFTPEAQKGQ 482
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 194/387 (50%), Gaps = 32/387 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG GDG +++ +AAI+ + +++P GK+L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDLWID 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGGR---YSSLIFGTNLTDVVITGD 164
KDA+L+ +D K++P++ + D EG +++LI G ++ +V+I G+
Sbjct: 139 KDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGE 198
Query: 165 NGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G +DG + WW+ + + + RP + + +NI + L ++NSPSW VHP YS +
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDN 256
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
++ TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAK 316
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
++IR + + +GSE++ G+ DV E ++ G+RIKT GRG + +
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYRDMVAENV 390
+ + MK + F Y PD + D P I I RD+ ENV
Sbjct: 376 ICFENIIMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 391 -TMAARLEGIAGDPFTGICISNVTIEL 416
+ A L G+ P I + N+T+
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLNF 462
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 198/415 (47%), Gaps = 48/415 (11%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ ++ +FG GDG +TK +AAI S++ +P G + S L S+ L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAI-----LACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG------------RYSSLIFGTNLTDV 159
L K A L+A D +P P D +G ++ +I G ++ +V
Sbjct: 137 LAKGAELIADTDRAAYP---KFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENV 193
Query: 160 VITGDNGTIDGQG--ELWWR--KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+I G GTI+G E WW+ K G RP L + + QN+ + +T NSPSW +
Sbjct: 194 LIYG-RGTINGNASKENWWKNPKVMVGAF---RPRLFFLSHCQNVTLCGVTFKNSPSWTL 249
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP +S ++ G+TI P SPNTDG++P+SC N I GDDC+AVKSG G
Sbjct: 250 HPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGK 309
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
Y P++ + IR+ + AV +GSEM+GG++++ E+ D++ G+RIKT GRG
Sbjct: 310 KYRTPSENIHIRQCLMENGHGAV-TVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRG 368
Query: 336 --GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYR 383
+ + R++ M + F I Y PD + P I +++
Sbjct: 369 KDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFE 428
Query: 384 DMVAENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGV 437
D+ A+N +AA +G+ I + N+T+ PK + + +SSGV
Sbjct: 429 DIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPK------SGVPAMSSGV 477
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 200/410 (48%), Gaps = 44/410 (10%)
Query: 41 FEYSAISCRAHSASLEEFGGV---GDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW 97
F + + C A SA + + V G S+ KA KA ++ + GG ++ P GK+
Sbjct: 5 FLIAVVGCFAISAGAQSYFDVTKYGAKKNSSIKATKAIEKTITAAAAAGGGTVYFPAGKY 64
Query: 98 LTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNL 156
LTG +L S+ T+ + A L S D ++ P++E S G D +S L + +
Sbjct: 65 LTGPIHLKSNITILIDAGAELHFSDDFDDYLPMVE---SRYEGVDVTS--FSPLFYANGV 119
Query: 157 TDVVITGDNGTIDGQGELWW---RKFRAGELK--------------------------YT 187
++ ITG G IDG G+ WW ++ G+ + +
Sbjct: 120 ENIAITG-RGVIDGHGKKWWDFVEGYKEGQPRTKWQLEFDRRNKNILLPDDPRQMKRGFL 178
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP-VTSPNTDGINPDS 246
RP I+ ++S+NI I + + NSP W ++P + +V V +TI P +PNTDGINP+S
Sbjct: 179 RPPFIQFLHSKNILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPES 238
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C+N I DC+I GDDC+ +KSG D G + P + I T + V+ +GSEMS
Sbjct: 239 CSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGGVV-IGSEMS 297
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHP 365
GG++ + + ++ G+RIKTA GRGG V+D+ V + MK + + A + Y
Sbjct: 298 GGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLDMEYAKGA 357
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
+ P +NI ++ A A + GI P +GI +++V E
Sbjct: 358 EEPVSERT-PTFRNIRLSNITAY-TNQALLINGIREMPVSGISLNDVVFE 405
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 192/405 (47%), Gaps = 56/405 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L +G VGDG T T AF+ AI+ R GG ++ VP G +LTG +L S+ L L
Sbjct: 59 LTRYGAVGDGRTDCTDAFRQAIEACHR---AGGGRVVVPRGTFLTGPIHLASNVNLHLDD 115
Query: 115 DAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A + QD + PV+ + R EG YS I+ +V ITG +G +DGQ +
Sbjct: 116 GATVRFKQDPAAYLPVV-----FTRWEGVEGMNYSPFIYAFGQENVAITG-SGVLDGQAD 169
Query: 174 --LWW----------------------RKFRA------------GELKYTRPYLIEIMYS 197
WW R F GE Y RP I+
Sbjct: 170 ENHWWPWKGRKEYGWREGMPTQDEARRRLFEMAEAGVPPEQRILGEGSYLRPNFIQFYRC 229
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+N+ I +T++NSP W +HPV +V V+G+T+ + PN DG NP+SC IEDC
Sbjct: 230 RNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPESCRYVLIEDCLF 287
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE-- 315
+GDDC+A+KSG + G +P+ ++IR V+ +GSE+SGG + AE
Sbjct: 288 DTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHGGVV-IGSEISGGAHHIYAERC 346
Query: 316 DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN-YDPHAL 374
++++ + + +RIKT RGG ++ +Y+R + + + A Y D +D
Sbjct: 347 EMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEEGDAGPFD---- 402
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
P++++I R++ + A L G A P + + + T + K
Sbjct: 403 PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGVEK 447
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 202/403 (50%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GD T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ R E YS L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTRFEGIELYNYSPLVYALDCKNVAITG-SGVLDG 133
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 134 SADNEHWWSWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + ++ +INSP W VHPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + + + I Y +N +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ +E
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIME 409
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 198/415 (47%), Gaps = 48/415 (11%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ ++ +FG GDG +TK +AAI S++ +P G + S L S+ L
Sbjct: 82 TLNVRDFGATGDGKQDDTKFIQAAI-----LACPKESRVLIPKGSYRITSLFLKSNLRLE 136
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG------------RYSSLIFGTNLTDV 159
L K A L+A D +P P D +G ++ +I G ++ +V
Sbjct: 137 LAKGAELIADTDRAVYP---KFPGMIESYDEQGEYNLGTWEGNPLPMFAGIITGLDVENV 193
Query: 160 VITGDNGTIDGQG--ELWWR--KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+I G GTI+G E WW+ K G RP L + + QN+ + +T NSPSW +
Sbjct: 194 LIYG-RGTINGNASKENWWKNPKVMVGAF---RPRLFFLSHCQNVTLCGVTFKNSPSWTL 249
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP +S ++ G+TI P SPNTDG++P+SC N I GDDC+AVKSG G
Sbjct: 250 HPYFSDNLKFYGLTINNPSDSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGK 309
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
Y P++ + IR+ + AV +GSEM+GG++++ E+ D++ G+RIKT GRG
Sbjct: 310 KYRTPSENIHIRQCLMENGHGAV-TVGSEMAGGVKNLVVEECRFYDTDRGLRIKTRRGRG 368
Query: 336 --GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYR 383
+ + R++ M + F I Y PD + P I +++
Sbjct: 369 KDAVLDQIIFRKIDMDQVMTPFVINCFYFCDPDGKTEFVQSREKMPVDDGTPAILRLDFE 428
Query: 384 DMVAENVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGV 437
D+ A+N +AA +G+ I + N+T+ PK + + +SSGV
Sbjct: 429 DIKAQNCHVAAAYFDGLPEQKIEQIIMKNITVTYAKNPK------SGVPAMSSGV 477
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 219/476 (46%), Gaps = 85/476 (17%)
Query: 9 RTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRA-----HSASLEEFGGVGD 63
R ++CI L SL+ N V ++K E+ + ++ +L++FG V
Sbjct: 5 RKILLCIALTS---FSLSFNTVSAQKYDTYKNIEFKMTEVQEPVIPNYNVNLKDFGAVNG 61
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G NTKAF AID LS+ +GG +L +PPG WLTG L S+ L + A++ S D
Sbjct: 62 GYVLNTKAFADAIDALSK---KGGGKLIIPPGIWLTGPIILKSNIELHAERGALIKFSTD 118
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW-------- 175
+ +P+IE + G +T R S I+G NL ++ TG NG DG GE W
Sbjct: 119 KSLYPIIE---TSFEGLNT--WRCISPIYGKNLENIAFTG-NGVWDGSGEAWRQVKKSKL 172
Query: 176 ----WRKFRAG------------------------------ELK----------YTRPYL 191
W+KF A +LK + RP L
Sbjct: 173 TDEQWKKFVASGGVLNEKKDSWYPSEQYLKGAKGADQNIRHDLKTKEDFEAIHDFLRPVL 232
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
+ I S+ + NSP+WN+HP+ +IV+ +T+ P S N DG++ +SC N
Sbjct: 233 VSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVESCKNVI 292
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
IE+ GDD + +KSG D+ G G+P + +I++ V +GSEMSGG+++
Sbjct: 293 IENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHGGV-TVGSEMSGGVKN 351
Query: 312 VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYG-------- 362
+ + T + ++ G+R K+ GRGG V+++Y+ + M + A YG
Sbjct: 352 LHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISFDLYYGGKSIAETL 411
Query: 363 SHPDNNYDPHALPV------IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
+ N A+PV +NI+ +++ + A L+G+ I I+N+
Sbjct: 412 AEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEITNL 467
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 195/393 (49%), Gaps = 31/393 (7%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + +++ FG GDG +++T A + AI ++++P GK+L S L +
Sbjct: 77 ESFTLNVKRFGAKGDGVSNDTLALQTAI-----MSCPENGRVYIPKGKYLITSLFLKDNL 131
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR--------YSSLIFGTNLTDVV 160
T+ L + A LL + + ++ L + + G ++SLI G N+ +V
Sbjct: 132 TIELGEGAELLGDTKRENFGILPGLIDNDKNEEYYLGSWEGNPLDSFTSLITGINVKNVR 191
Query: 161 ITGDNGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
I G G ++GQ E WW+ + + + RP I + +N+ I + ++NSPSW +HP
Sbjct: 192 IIG-RGCLNGQASKENWWKNPKVKNIAW-RPRSIFLNSCENVVIEGIKIMNSPSWTIHPF 249
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
++++ + I P SPNTDGI+P+SC N GDDC+A+KSG G
Sbjct: 250 LTNNLRFINLKIENPADSPNTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLN 309
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--G 336
P+K II+ + V+ +GSEMSGG++++ E ++ G+RIKT GRG G
Sbjct: 310 KPSKNFIIKNCSMKYGHGGVV-IGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENG 368
Query: 337 FVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMV 386
+ +YV+ ++MK +K F Y PD Y LPV I+NI++ ++
Sbjct: 369 VIDGIYVKNISMKEVKVPFVFNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIK 428
Query: 387 AEN-VTMAARLEGIAGDPFTGICISNVTIELTN 418
AE+ + A L G+ P + NV ++ +
Sbjct: 429 AEDTLVCAGFLYGLPEKPIENVKFKNVEVDFKD 461
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 192/412 (46%), Gaps = 51/412 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ + + +++ G G S T+ I+ + SEGG ++ P G +LT + ++
Sbjct: 14 AVVAMSRTFDMKQLGADAKGIKSCTELINRTIEKAA---SEGGGTIYFPVGTYLTATIHM 70
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
S+ TL+L AVL S +++ L R T S LI+ + +V I+G
Sbjct: 71 KSNITLYLESGAVLRFSDKFEDYLPFVTL----RWEGTVMKSLSPLIYAHSADNVTISG- 125
Query: 165 NGTIDGQGELWWR---------KFRAGEL-----------------------------KY 186
GT+DG G WW K G+L +
Sbjct: 126 RGTLDGNGLKWWLWEFDTRKVIKENGGKLPTLDKLQQMWVDANKDLEISDYYKPSLERRM 185
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGIN 243
RP I+ NI I N+ +INSP W ++P + +V + G+TI P ++P NTDGIN
Sbjct: 186 FRPPFIQFYECTNILIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGIN 245
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
P SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +GS
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVV-IGS 304
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYG 362
EMSGG++ V + + +G+R+K + GRGG V+D+ V + MK ++ AF Y
Sbjct: 305 EMSGGVKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFYD 364
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
P+ +NI+ ++ ++ ++GI P + + SN+ I
Sbjct: 365 RLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNI 416
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 193/427 (45%), Gaps = 78/427 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S S+ ++G VGDG T NT+AF AI S+ GG ++ +P G WLTG +L S L
Sbjct: 26 RSFSVTDYGAVGDGVTDNTEAFHKAIAACSQ---AGGGRVVIPAGVWLTGPLSLASRLDL 82
Query: 111 FLHKDAVLLASQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
A++L S+ +++P+I E PS R S + G L V ITG G
Sbjct: 83 HAQAGALVLFSRRFEDYPMIFSQYEGQPSI---------RCQSPLDGEGLEHVAITG-AG 132
Query: 167 TIDGQGELW------------WRKF-------------------------RAGELK---- 185
DG G+ W W K + +LK
Sbjct: 133 VFDGGGDAWRPVKDWKMTEKHWAKLIASGGVVDEAAGMWWPSEAAMNGPAKVAQLKREGS 192
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
Y RP L+ + + + + T NSP+WN+HP V ++G+T+ P
Sbjct: 193 TDPKDYEAARDYLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPW 252
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
N DG++ DSC +EDC GDD + +KSG D+ G G+P + ++IR
Sbjct: 253 YGQNGDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHG 312
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----K 349
+ +GSEMSGG++ +R ED T + ++ G+R K+ GRGG V+D+ + R+ M +
Sbjct: 313 HGGFV-IGSEMSGGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGE 371
Query: 350 TMKWAFWITGSYGSH-PDNNYDPHAL--PVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
+ + + G GS N P ++ P+ + I RD+ A + G+ P G
Sbjct: 372 AISFHLFYEGKEGSGVAGENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDG 431
Query: 407 ICISNVT 413
+ + N T
Sbjct: 432 LVVENFT 438
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 39/412 (9%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ ++ FG GDG +T A + AI + ++++P GK+L S L S FTL
Sbjct: 81 TLNVRRFGAKGDGIHDDTLAIQTAIASCPK-----DGRVYIPEGKYLVTSLFLKSDFTLD 135
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR------------YSSLIFGTNLTDV 159
+ K+AVLL + +++ V LP + D G ++S+I G ++++V
Sbjct: 136 IGKNAVLLGHAEREKFGV---LPGMIQSYDETGEYNLGSWEGNPLDIFTSMITGIHVSNV 192
Query: 160 VITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
VITG+ GT+DG WW RA + + RP ++ + + ++ + +T+ NSPSWN+HP
Sbjct: 193 VITGE-GTLDGCATFDDWWEDDRAKIIAF-RPRMVFLNHCDHVVLHGVTIQNSPSWNLHP 250
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
+S + +TIL P SPNTDG++P+S I Y GDDC+A+KSG G Y
Sbjct: 251 YFSDDLRFLDLTILNPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKY 310
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-- 335
+P++ + +R+ C++ + +GSEM+ G++ V +D + ++ G+RIKT GRG
Sbjct: 311 KVPSQNIEVRQ-CCMNNGHGAVTIGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRGKD 369
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYG-SHPDNNYD----PHALPV------IQNINYRD 384
V+D+ + M + F + Y PD + D LPV ++ + +R+
Sbjct: 370 AVVEDICFENIRMDHVLTPFVLNSFYNCCDPDCHSDYVKCKSPLPVDERTPSVKQMVFRN 429
Query: 385 MVAENVTMA-ARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISS 435
+ A N +A A L G+ + +VTI+ P+ + D G+++
Sbjct: 430 IEAHNCHVAGAFLYGLPEKKVDYVEFDHVTIDYDENPEPDEPAMMDDIGLTA 481
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 193/391 (49%), Gaps = 36/391 (9%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + + G V G T NT AF A ++ GG ++ VP G+WLTG +L S+
Sbjct: 51 ARVEDIRDHGAVPGGKTKNTAAFAQA---IAACAEAGGGRVLVPAGRWLTGPIHLRSNIE 107
Query: 110 LFLHKDA-VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L +DA V+ + + E PV+ R E YS I+ + T+V ITG G +
Sbjct: 108 LHLAQDAEVIFSDRFEDYLPVV-----LVRVGGIELYNYSPFIYARDCTNVAITGP-GRL 161
Query: 169 DGQGELWW--------RKFRAGE-------------LKYTRPYLIEIMYSQNIQISNLTL 207
+G + WW R FR RP + +N+ + T+
Sbjct: 162 NGNSQRWWAWKTKETKRIFRLAPDGVPVEQRIFGTPEAAIRPNFVVFFNCRNVLMEGFTI 221
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
P+W +HPVYS ++I++ + +L PN DGI+PDSC N IE C +GDDCV +K
Sbjct: 222 GGGPNWTIHPVYSENIIIRRVHVL--TEGPNNDGIDPDSCRNVLIEHCVFDTGDDCVVLK 279
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SG+++ G PT+ +++R + ++ +GSEMSG +++V D ++ VR
Sbjct: 280 SGYNEDGWRVARPTENVVMRWCSSARGHGGLV-VGSEMSGDVRNVYMHDCDFAGTDRAVR 338
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG-SYGSHPDNNYDPHALPVIQNINYRDMV 386
IK+ GRGG V++++ + ++ M+ I YG+ + + P+ +NI+ R +
Sbjct: 339 IKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQAFT-EKPPLFRNIHVRRVT 397
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELT 417
A+ A R+ G+A P + ++TI+ T
Sbjct: 398 ADGAPAAIRIAGLADSPIEHVTFEDLTIQST 428
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 194/387 (50%), Gaps = 32/387 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG GDG +++ +AAI+ + +++P GK+L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKTDSVCIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDLWID 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGGR---YSSLIFGTNLTDVVITGD 164
KDA+L+ +D K++P++ + D EG +++LI G ++ +V+I G+
Sbjct: 139 KDAILIGEKDRKKYPILPGMTQSSDENDEYNIGSWEGNPLDCFAALITGISVENVLIFGE 198
Query: 165 NGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G +DG + WW+ + + + RP + + +NI + L ++NSPSW +HP YS +
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSDN 256
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
++ TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAK 316
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
++IR + + +GSE++ G+ DVR ++ G+RIKT GRG + +
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDN 375
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYRDMVAENV 390
+ + MK + F Y PD + D P I I RD+ ENV
Sbjct: 376 ICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENV 435
Query: 391 -TMAARLEGIAGDPFTGICISNVTIEL 416
+ A L G+ P I + N+T+
Sbjct: 436 KNIFACLYGLPEMPVEEIVLENITLNF 462
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 198/418 (47%), Gaps = 69/418 (16%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++++G VGDG T ++KA + AID + G + +P G + T L S TL +
Sbjct: 146 NVKDYGAVGDGVTKDSKAIQDAIDACTP-----GGVVVIPAGTYYTAPLKLKSDMTLNIE 200
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ-- 171
K A +LAS+D ++ +I+ R T Y S+I + ++ I G+ GTIDG
Sbjct: 201 KGATILASRDVSDYKIIDS-----RWEGTSFKSYMSIITAIDAKNLNIIGE-GTIDGNAG 254
Query: 172 ------------------------GE---------------------LWWRKFRAGE--L 184
GE LWW +A +
Sbjct: 255 PIKEAAAGETEDAYGYPVNKVNVSGEYDYNMGKYNGDKSTAVNFDMGLWWDNPKATDPTK 314
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL---APVTSPNTDG 241
+ RP I+++ + I + + NSPSW +HP+YS ++ + + + +PV SPNTDG
Sbjct: 315 QTARPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDG 374
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
++PDS N + + GDDC+A+KSG D G G+P+ + IR + V L
Sbjct: 375 LDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHGGV-TL 433
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGS 360
GSEMSGGI ++ +D + GVR+KT GRGG ++DV + MK + AF I +
Sbjct: 434 GSEMSGGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSN 493
Query: 361 YGSH----PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
Y S+ P P I+N+ ++++ A A+ +G+ P G+ +SN+ +
Sbjct: 494 YSSNGAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINV 551
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 188/383 (49%), Gaps = 31/383 (8%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T++ +A ID + + GG ++ V PG TGS L SH L + AVL D +P
Sbjct: 26 TESLQARIDEAA---ARGGGRVTVGPGVHRTGSLRLRSHVELHVEAGAVLQFVPDPALYP 82
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTR 188
+E R + ++ + V ITGD G G WW FRAG L + R
Sbjct: 83 PVE-----ARWEGAPATIHQPCLYAHDAEHVAITGDGVIDGGGGP-WWEAFRAGTLAHPR 136
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P L+ + ++++ ++TL +SP+W VHP+ V V+ +TI+ P SPNTDGI+P+SC
Sbjct: 137 PTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPNTDGIDPESCR 196
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N RI C+I GDDC+A+K+G + + + +++ T + V+ LGSEMSGG
Sbjct: 197 NVRISGCHIDVGDDCIALKAGTEAS--PERVACENVVVTGCTLVHGHGGVV-LGSEMSGG 253
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN 368
I++V D ++ G+R+K GRGG V+DV V + M + + Y P +
Sbjct: 254 IRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQHYDRGPGGD 313
Query: 369 YDPH-----ALPV------IQNINYRDMVAENVTMAARLE-GIAGDPFTGICISNVTIEL 416
PH ALPV + I + A NV AA G+A P + + +V +
Sbjct: 314 -SPHVGDRGALPVDATTPLFRRITVAHVSARNVRAAAVFALGLAEQPVAELVLDDVAVSF 372
Query: 417 TNKPKKLQWNCTDITGISSGVTP 439
P+ + +++GV P
Sbjct: 373 APDPEPFE------PAMAAGVGP 389
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 202/403 (50%), Gaps = 55/403 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG GD T +++FK AI+ LS+ +GG +L VP G +LTG +L S+ L
Sbjct: 24 REVNLLDFGARGDERTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIEL 80
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K + E+ PV+ + E YS L++ + +V ITG +G +DG
Sbjct: 81 HV-KGTIKFIPDPERYLPVV-----LTKFEGIELYNYSPLVYALDCKNVAITG-SGVLDG 133
Query: 171 QG--ELWW---------------------RKFRA-------------GELKYTRPYLIEI 194
E WW +K + G+ Y RP ++
Sbjct: 134 SADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQF 193
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N+ + ++ +INSP W VHPV S +VI++ I I + T PN DGI+P+SC IE
Sbjct: 194 YRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDPESCKYMLIEK 251
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVR 313
C +GDD V +KSG D G G+P++ +++R IS S + +GSEMSGG+++V
Sbjct: 252 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVV 311
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDV-YVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
A + ++ E +R+KT RGG+++++ ++ + + + I Y +N +
Sbjct: 312 ARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRY-----DNEEGE 366
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
LPV++++ +++ A A R+EG+ D I IS+ +E
Sbjct: 367 YLPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIME 409
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 205/413 (49%), Gaps = 59/413 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG T NT+AF+ AI+ + +EGG ++ VP G +LTG+ L S+ L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIE---KCHAEGGGRVVVPHGVFLTGAIYLKSNVNLHLT 113
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+L S+D ++P++ + R E YSS I+ ++ ITG GT+DG +
Sbjct: 114 DGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGTLDGNSD 167
Query: 174 ----LWW---RKF-----RAGELK-------------------------YTRPYLIEIMY 196
WW RK+ R+GE K Y RP ++
Sbjct: 168 NDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYN 227
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
+NI I ++ +INSP WN++PV +V ++ + +++ PN DG +P++C N I+DCY
Sbjct: 228 CKNILIEDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCY 285
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+GDDC+A+KSG D+ G G P + II V+ +GSE++GG +++ A +
Sbjct: 286 FDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHGGVV-IGSEIAGGARNIYALN 344
Query: 317 ITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
+DS + +R+KT+ RGG +++V+++ + + T K A + P ++
Sbjct: 345 -NKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFYEKPGDH----- 398
Query: 374 LPVIQNINYRDM-VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P I+N+ +M V + A P + N I +P K+ +
Sbjct: 399 IPTIRNVWVENMHVKKGGKYALMSAAYESSPIKNFRMVNCEINGVKEPYKVDY 451
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 201/410 (49%), Gaps = 55/410 (13%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S + FG G G T A + AID + GG ++ VP G +L+G+ L S+ L
Sbjct: 23 SFDVTAFGADGSGKKDATGAIQKAIDQAHK---AGGGRVAVPEGVFLSGALRLKSNVELH 79
Query: 112 LHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L + AV+ SQ+ +++ PV+ R E YS LI+ ++ ITG GT+DG
Sbjct: 80 LAQGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 171 QG--ELWW-------------------------------RKFRAGELKYTRPYLIEIMYS 197
QG E WW R+F G Y RP I+
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
++I I +T++NSP W VHPV +V V GI ++ PNTDG+NP+SC N I+ C+
Sbjct: 192 KDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED- 316
+GDDC+AVKSG + G MP++ ++I V +GSE+SGG+++V AE
Sbjct: 250 DNGDDCIAVKSGRNADGRRINMPSENIVIEHNEMKDGHGGV-TIGSEISGGVKNVIAEGN 308
Query: 317 -ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL 374
+ + + + +RIKT RGG ++++Y + T+K++K I Y ++
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK---- 364
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PV++NI+ + + R+ P TG+ +++ I+ + P +L+
Sbjct: 365 PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELK 414
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 206/443 (46%), Gaps = 66/443 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVP--PGKWLTGSFNLTS 106
RA + ++G D + +T A + AI+ SR EGG L P G +LTGS L S
Sbjct: 517 RACICDVSDYGARDDNKSISTHAIQTAIEACSRC-PEGGHVLLRPLDKGIYLTGSLFLKS 575
Query: 107 HFTLFLHKDAVLL--ASQDEKEWPVIEPLPSYGRGRDT-EGGRYSSLIFGTNLT------ 157
+ + LL A++ WP I Y R E R + L GT LT
Sbjct: 576 NIIFEVTAGVRLLGTANKSTVHWPQI-----YRRNAGVLELSRAALLNAGTCLTFHSTNQ 630
Query: 158 ------------DVVITGDNGTIDGQGELWWR--KFRAGELKYTRPYLIEIMYSQNIQIS 203
++ ITG GTIDG G W + G RP LI M+ + +S
Sbjct: 631 TGDQCAEWSRYSNITITG-AGTIDGNGFSGWYLPPYLNGSFT-NRPMLIAPMWVDGLYLS 688
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
+LTL + W V P + +V + + I+ + PNTDG++PDSC N +E CYI +GDDC
Sbjct: 689 DLTLTDPAFWTVAPAFCKNVHIHDLRII--TSGPNTDGVDPDSCQNVLVERCYISTGDDC 746
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRL----------TCISPFSAV-------------IA 300
+A+KSG +A MPT + IR + T I ++ I+
Sbjct: 747 IAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTGHGIS 806
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
+GSEMSGGI DV +++T + +GVR+KT +GRGG V++V R M + ++ A I
Sbjct: 807 IGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYRNMVIDSVDTAVLINQD 866
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
Y S ALP +I ++++A NV MA LE + + G+ NVT+
Sbjct: 867 YNS---VTCVGDALPNFSDILVQNVIANNVKMAFELECLQDNSCAGLRFENVTVTAFQNA 923
Query: 421 KKLQWNCTDITG-ISSGVTPKPC 442
K C + I V+P PC
Sbjct: 924 SK----CAHVQPEIGPNVSPVPC 942
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 191/413 (46%), Gaps = 53/413 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ + + +++ G G TK I+ + SEGG ++ P G +LT + ++
Sbjct: 14 AVVATSRTFDMKQLGADAKGIKPCTKLINQTIEKAA---SEGGGTIYFPAGTYLTATIHM 70
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL L A++ S +++ LP R T S LI+ + ++ ITG
Sbjct: 71 KSNITLHLESGAIVRFSDRFEDY-----LPFVTARWEGTVMQTLSPLIYAHSADNLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT+DG G WW K G+L K
Sbjct: 126 -RGTLDGNGLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANKDLEISDYYKPSLERK 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ NI I N+ +INSP W V+P + +V + G+TI P ++P NTDGI
Sbjct: 185 MFRPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ + + + +G+R+K + GRGG V+D+ V + MK ++ AF Y
Sbjct: 304 SEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
P+ +NI+ ++ ++ ++GI P + + SN+ I
Sbjct: 364 DRLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 191/413 (46%), Gaps = 53/413 (12%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
A+ + + +++ G G TK I+ + SEGG ++ P G +LT + ++
Sbjct: 14 AVVATSRTFDMKQLGADAKGIKPCTKLINQTIEKAA---SEGGGTIYFPAGTYLTATIHM 70
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITG 163
S+ TL L A++ S +++ LP R T S LI+ + ++ ITG
Sbjct: 71 KSNITLHLESGAIVRFSDRFEDY-----LPFVTARWEGTVMQTLSPLIYAHSADNLTITG 125
Query: 164 DNGTIDGQGELWWR---------KFRAGEL-----------------------------K 185
GT+DG G WW K G+L K
Sbjct: 126 -RGTLDGNGLKWWLWEFETRKVIKENGGKLPSLDKLQQMWVDANNDLEISDYYKPSLERK 184
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGI 242
RP I+ NI I N+ +INSP W V+P + +V + G+TI P ++P NTDGI
Sbjct: 185 MFRPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGI 244
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
NP SC N RI DC+I GDDC+ +KSG D G YG + + I +S V+ +G
Sbjct: 245 NPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVV-IG 303
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY 361
SEMSGG++ + + + +G+R+K + GRGG V+D+ V + MK ++ AF Y
Sbjct: 304 SEMSGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNIQGDAFIFDLFY 363
Query: 362 GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
P+ +NI+ ++ ++ ++GI P + + SN+ I
Sbjct: 364 DRLSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNI 416
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 194/409 (47%), Gaps = 63/409 (15%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L +F GDG NT AFKAAID + GG Q+ VP G +LTG+ L S+ L +
Sbjct: 57 LTDFDARGDGIFDNTAAFKAAIDACRK---AGGGQIRVPDGHYLTGAIQLHSNIELNVSA 113
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG-- 172
A L+ S D ++PV+ R E YS LI+ + +V ITG+ G +DGQ
Sbjct: 114 GARLIFSTDPMDYPVV-----LTRYEGVEVMNYSPLIYARDAKNVAITGE-GVLDGQASN 167
Query: 173 ELWW----------------------------------RKFRAGELKYTRPYLIEIMYSQ 198
E WW + R G Y RP +E +
Sbjct: 168 EHWWPWCGAERFGWREGVGHQTPDRQALFEMAESGIPVEQRRFGPGHYLRPSFVEFYNCE 227
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
N+ + ++ L +SP WN+HPV S +VIV+G+ ++ PN DG NP+S + IE+CY
Sbjct: 228 NVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPESVDHMLIENCYFD 285
Query: 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT 318
+GDDC+A+KSG + G +P++ ++IR + V+ +GSE+SG + +V AE
Sbjct: 286 TGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHGGVV-IGSEISGDVFNVYAEG-C 343
Query: 319 AIDSES---GVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA-- 373
A+DS +RIK RGG V+++++R + + + A I D NY+
Sbjct: 344 AMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMIC-------DFNYEEGING 396
Query: 374 --LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
PV++N++ + + + +G A I + + + P
Sbjct: 397 PFTPVLRNVSMQSIAVKKAVRVLDSQGFAKAEIENISLKDCIFNGVSSP 445
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 204/412 (49%), Gaps = 57/412 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG T NT+AF+ AI+ + +EGG ++ VP G +LTG+ L S+ L L
Sbjct: 57 NIADFGAKGDGVTKNTEAFRLAIE---KCHAEGGGRVVVPNGVFLTGAIYLKSNVNLHLT 113
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+L S+D ++P++ + R E YSS I+ ++ ITG GT+DG +
Sbjct: 114 DGTTILFSRDSSDYPIV-----FTRWEGMECMNYSSFIYAYGEENIAITG-KGTLDGNSD 167
Query: 174 ----LWW---RKF-----RAGELK-------------------------YTRPYLIEIMY 196
WW RK+ R+GE K Y RP ++
Sbjct: 168 NDNWWWWCGARKYGWNESRSGEQKPARARLHTMMHQEVDAKQRVFGDGQYLRPNFVQPYN 227
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
+NI I ++ +INSP WN++PV +V ++ + +++ PN DG +P++C N I+DCY
Sbjct: 228 CKNILIEDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCDPEACKNVLIKDCY 285
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA-- 314
+GDDC+A+KSG D+ G G P + II V+ +GSE++GG +++ A
Sbjct: 286 FDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHGGVV-IGSEIAGGARNIYALN 344
Query: 315 EDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL 374
+ + + + +R+KT+ RGG +++V+++ + + T K A + P ++ +
Sbjct: 345 NKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAAVKFNMFYEKPGDH-----I 399
Query: 375 PVIQNINYRDM-VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
P I+N+ +M V + A P + N I +P K+ +
Sbjct: 400 PTIRNVWVENMHVKKGGRYALMSAAYESSPIKNFRMVNCDINGVKEPYKVDY 451
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 194/409 (47%), Gaps = 51/409 (12%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S S+ +FGG GDG NT+AF+AAI ++ GG ++ VPPG + TG L SH L
Sbjct: 43 SVSILQFGGKGDGKALNTEAFRAAIQACAK---AGGGRVVVPPGTFRTGPIELASHVALI 99
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ K A++ AS ++ + +PLP+ + D LI GT L D+ I G+ G IDG
Sbjct: 100 VEKGAIIQASDRFSDFGLPDPLPATQQEIDGYKKLLRPLISGTKLDDIAIAGE-GIIDGA 158
Query: 172 GELWWRKFRA----------------------------------GELKYTRPYLIEIMYS 197
G WW K L RP+LI +
Sbjct: 159 GSGWWAKSDKAAERAAAAAKAGESASTKPADSTSPKSEKPAPPEKPLYVPRPFLITLRDC 218
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+ + +TL NSP ++ P + V+V+ +TI +P +PNTDGI+P + + I C I
Sbjct: 219 ARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPANSRDVLIRRCTI 278
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
+GDD +AVK G G+A PT+ + + C +++GSE G+++ +
Sbjct: 279 DTGDDNIAVKGG----GVA-NEPTENVTV--TDCKFLHGHGVSIGSETEAGVRNFLVQRC 331
Query: 318 TAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-----FWITGSYGSHPDNNYDPH 372
++ + +RIK+ RGG V++V R +TMK ++ A F+ +HP+
Sbjct: 332 AFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDDKKAAAHPELAPVTK 391
Query: 373 ALPVIQNINYRDMVAENVT-MAARLEGIAGDPFTGICISNVTIELTNKP 420
P+++NI ++ +V T A L G+ P + + +V I+ P
Sbjct: 392 QTPMVRNITFQKIVCHGTTRKAGELVGLPESPISDVVFDDVHIDGAAAP 440
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 201/398 (50%), Gaps = 46/398 (11%)
Query: 55 LEEFGGV---GDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ +FG D T T A AID S GG + VP G+WLTG +L S+ L
Sbjct: 68 IRDFGAKEMDADKTNKCTDAIHKAIDAASE---SGGGTVLVPAGQWLTGPVHLKSNINLH 124
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L K+A L S+D+ ++ + P R E YS LI+ N+T+V ITG GT++GQ
Sbjct: 125 LEKNASLFFSEDKTDYLPVVP----QRYEGVEVYNYSPLIYAANVTNVSITG-KGTLEGQ 179
Query: 172 GELW--W-----------------RKFRAGELKY-TRPYLIEIMYSQNIQISNLTLINSP 211
G+ W W + F G K RP + S+NI + +TL SP
Sbjct: 180 GQHWLEWGTVQPRANAAKVPLSRRKNFGKGAGKEGMRPNFVVFWKSKNILVEGITLNESP 239
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+H VYS + IV+ IT+ + + S N DG+ DS + +E + +GDD + +KSG++
Sbjct: 240 MWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSSHDVLLEYNQLHTGDDAIVLKSGFN 298
Query: 272 QYGIAYGMPTKQLIIRRLTC--ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
+ G+A +PT+ ++IR + S + GSE SGGI++V D + G+R K
Sbjct: 299 EDGLAINIPTENVVIRNYYAYKVRTGSGGVVFGSETSGGIRNVYVHDAVFEKCDRGIRFK 358
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSY---GSHPDNNYDPHALPVIQNINYRDM 385
TA GRG +++++VR ++MK + + A I +Y G P P+++NI+ R++
Sbjct: 359 TARGRGNVIENIFVRDISMKDITYEAININTAYAGAGIGPS--------PMVRNIDIRNI 410
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+ V A L G+ I + N+ + + K +L
Sbjct: 411 RIDGVPDAIVLNGLPEKWIENIRMDNIIVTNSEKGIRL 448
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 214/415 (51%), Gaps = 50/415 (12%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ-LFVPPGKWLT 99
FE +SC ++ G VGDG T NT+ + A+D L+ +++G +Q L PPG+WLT
Sbjct: 186 FECPVLSC----VNVALAGAVGDGMTVNTETIQNALDSLT-MKAQGRTQTLAFPPGRWLT 240
Query: 100 GSFNLTSHFTLFLH-KDAVLLASQDEKEWPVIE-----PLPSYGRGRDTEGGRYSSLIFG 153
G L S+ + L + L A + WP+ + LPS D + + I
Sbjct: 241 GPLELKSNVKIVLDGPRSFLEAVKSTDLWPIDDWKEHPSLPS-----DDPTPIFRAFIHA 295
Query: 154 TNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTR--------PYLIEIMYSQNIQISNL 205
N T++ I+G GTI+G G+ WW R + KY+ P L+ ++ +++I N+
Sbjct: 296 YNQTNIEISG-GGTINGHGDFWWD--RKTDQKYSPSMRKKAHVPNLVHLVGCSDVKIENI 352
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD--DC 263
L NSP + V P Y + V V I I P SP T+G+ DS +N+ + D +I +GD D
Sbjct: 353 VLTNSPHFTVRPQYCNKVSVSRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDA 412
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT--AID 321
VA+KSG D +G +P+K + + +T + +++GSEMSGG+ ++ DIT +
Sbjct: 413 VAIKSGKDYHGRKANVPSKNIRVEHVTILG--GHALSVGSEMSGGVSNIIFSDITFDGRN 470
Query: 322 SESGV---RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP---HALP 375
++ GV R+KT GRGG V + + + +A + Y S D N P P
Sbjct: 471 NKFGVGSARVKTMRGRGGVVDQITFQNIRGWNALYALELY-EYYSKQDTNVGPVSREETP 529
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE---LTNKPKKLQWNC 427
+++NIN++++ E + A + IAG P + +SN+ IE LTN K WNC
Sbjct: 530 IVKNINFKNVHIEGIKRYAGV--IAGLP--EMAVSNLVIENVHLTNVHKG--WNC 578
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 196/398 (49%), Gaps = 54/398 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
++ +G V DG + +T A +AI + GG ++ VP G +LTG+ +L S+ L L +
Sbjct: 55 IQHYGAVADGQSLSTGAINSAIIACHK---AGGGRVLVPAGHYLTGAVHLLSNVELHLAE 111
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+A L S+D ++ LP+ + R E YS LI+ ++ ITG G +DG
Sbjct: 112 NARLSFSRDPNDY-----LPAVFTRWEGVEYMGYSPLIYAYQAENIGITG-TGVLDGSAS 165
Query: 174 --LWW---------------------------------RKFRAGELKYTRPYLIEIMYSQ 198
WW R+ + Y RP I+ +
Sbjct: 166 EMHWWPWKGTSEWARPGFASQDNSRAQLFAQAEAGVPPRQRHYSDGHYLRPPFIQPYQCR 225
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
N+ + ++T+IN+P W VHPV +V + + + + PN+DG NP+SC N IE C+
Sbjct: 226 NVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQS--LGPNSDGCNPESCRNVLIEHCFFD 283
Query: 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED-- 316
+GDDC+A+KSG + G +P++ ++IR + V+ +GSE+SGG+++V A D
Sbjct: 284 TGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHGGVV-IGSEISGGVRNVYAHDNR 342
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPV 376
+++ D E G RIKT RGG ++++Y+R + + +K A I Y +D P
Sbjct: 343 MSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFD----PT 398
Query: 377 IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
++NIN ++ E+ ++ G P + I+N T
Sbjct: 399 VRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITNSTF 436
>gi|302143794|emb|CBI22655.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 109/148 (73%), Gaps = 5/148 (3%)
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKT + RGG+VKD+YVRRMTMKTM++AFWI G YG P H PVI+ INYRDMVA
Sbjct: 5 IKTGLERGGYVKDIYVRRMTMKTMRFAFWIIGDYGPPPAPG---HEGPVIEGINYRDMVA 61
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD 447
+NVT A+L GI+G PFTG CISNVTI LT + +K QW+C ++ GI+S VTP+PC+LL
Sbjct: 62 DNVTYPAQLHGISGGPFTGFCISNVTIGLTEESRKQQWDCDEVQGITSRVTPQPCDLLSP 121
Query: 448 HEPAQTTECNFPDNRLPVENMGVQMCSY 475
+ + C FP + LP+E++ +++CSY
Sbjct: 122 SK--EILNCPFPKDLLPIEDVKLRICSY 147
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 173/349 (49%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ + +FGG+GDG NT+AF AID LS ++GG L VP G WLTG S+ L
Sbjct: 45 NKVKITDFGGIGDGIYLNTQAFSKAIDALS---AKGGGMLTVPAGIWLTGPIQFKSNINL 101
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L A++L S D+ +P++E + G DT R S I+G NLT++ ITG +G IDG
Sbjct: 102 HLEDRAIILFSPDKNLYPIVE---TSFEGLDTR--RCQSPIWGKNLTNIAITG-SGAIDG 155
Query: 171 QGELW------------WRK----------------------------------FRAGE- 183
G+ W W+K F+ E
Sbjct: 156 NGQFWRPLKKQKVTESFWKKTVSGGGVFKRSDYWMPSAQYLHGDTISDMNVPRHFKTDEE 215
Query: 184 ----LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ +N+ + + NSP+WN+HP+ +VI+ GI + P + N
Sbjct: 216 WQSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNG 275
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N + + GDD + +KSG ++ G GMP + +I+ T +
Sbjct: 276 DGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFV 335
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG++++ + + ++ G+R K+ GRGG V+++++ ++M
Sbjct: 336 -VGSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISM 383
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 203/434 (46%), Gaps = 83/434 (19%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++++FG V G NTKAF AID +S+ +GG ++ +PPG WLTG L S+ L
Sbjct: 51 NSVNIKDFGAVNGGYVLNTKAFADAIDAVSK---KGGGKVIIPPGIWLTGPIILKSNIEL 107
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNGT 167
+ A++ S D+ +P+I G + EG R S I+G NL ++ TG NG
Sbjct: 108 HAERGALIKFSTDKSLYPII--------GTNFEGLNTWRCISPIYGKNLENIAFTG-NGV 158
Query: 168 IDGQGELW------------WRKFRAG------------------------------ELK 185
DG GE+W W+KF + +LK
Sbjct: 159 WDGSGEVWRQVKKSKLTESQWKKFVSSGGVLNKDKTSWYPSETFMNASKGADQNVRPDLK 218
Query: 186 ----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT 235
+ RP ++ I S+ + NSP+WN+HP +IV+ +T+ P
Sbjct: 219 TKEEFETIHDFLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWY 278
Query: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295
S N DG++ + C N +E+ GDD + +KSG D+ G+ G+P + +I+R
Sbjct: 279 SQNGDGLDVECCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGH 338
Query: 296 SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG-----FVKDVYVRRMTMKT 350
V +GSEMSGG++++ + T + ++ G+R K+A GRGG F+ DV++ + +
Sbjct: 339 GGV-TVGSEMSGGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQA 397
Query: 351 MKWAFWITGSY--------GSHPDNNYDPHAL--PVIQNINYRDMVAENVTMAARLEGIA 400
+ + + G G N P + P +NI+ +++ + A L+G+
Sbjct: 398 ISFNLYYGGKSIAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLP 457
Query: 401 GDPFTGICISNVTI 414
I ISN+T+
Sbjct: 458 EMNLENIEISNLTV 471
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 208/411 (50%), Gaps = 56/411 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G VGDG T NT+AF+AAI R GG + VP G++LTG+ +L S L +
Sbjct: 63 TITDYGAVGDGQTMNTEAFRAAIADCHR---AGGGHVLVPEGRFLTGAIHLRSGVDLHVT 119
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A + S D +++ PV+ + R TE YS I+ +V +TG GT+DGQ
Sbjct: 120 EGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP-GTLDGQA 173
Query: 173 EL-----WWR-----------------------KFRAGELKYTRPYLIEIMYSQNIQISN 204
L W+R + G+ Y RP +++ +N+ +S
Sbjct: 174 RLGPWESWYRTSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVLVSG 233
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
LT+++ P W VHPV S++V V+ IT+ + T NTDG +P+ C++ I C + DDCV
Sbjct: 234 LTIVDPPMWTVHPVLSTNVTVRDITVDS--TLYNTDGCDPECCSDVLITGCRFNTNDDCV 291
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE--DITAID- 321
AVKSG D+ G G+P++ +++R + + +GSEMSGG++D+ AE +I + D
Sbjct: 292 AVKSGRDEDGHRVGVPSRNIVVRDCRFSGRWGG-MTVGSEMSGGVRDIFAENCEINSPDF 350
Query: 322 -----SESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDNNYDPHALP 375
+ + +K + RGG + V++R T + + + A ++ +Y N + LP
Sbjct: 351 PGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAVFVNMNY-----NGGEGGTLP 405
Query: 376 V-IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
V ++NI+ M + +L G+ D G+ +S T P + +
Sbjct: 406 VSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGILNPDSIAY 456
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 194/390 (49%), Gaps = 38/390 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG +GDG+ ++ +AAI+ + +++P GK+L L S+ +++
Sbjct: 84 NVKDFGALGDGSGLDSGYIQAAINACPK-----DGTVYIPKGKYLCTPVFLKSNIDIWID 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT---------EGGR---YSSLIFGTNLTDVVI 161
KDA+L+ +D K++P+ LP D EG +++LI G ++ +V I
Sbjct: 139 KDAILIGEKDRKKYPI---LPGMIESSDEKKEYNIGSWEGNPLDCFAALITGISVENVHI 195
Query: 162 TGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
G+ G +DG + WW+ + + + RP + + +NI + L ++NSPSW VHP Y
Sbjct: 196 YGE-GILDGNASMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYY 253
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
S +++ TI+ P SPNTDG++P+SC N I I GDDCVA+KSG + +
Sbjct: 254 SDNLLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYK 313
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GF 337
P K ++IR + + +GSE++ G+ DV E ++ G+RIKT GRG
Sbjct: 314 PAKNIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVEKCIFEGTDRGLRIKTRRGRGEKSV 372
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYRDMVA 387
+ ++ + MK + F Y PD + D P I I RD+
Sbjct: 373 LDNICFENILMKDVCMPFTANMFYFCDPDGHSDYVQNQDKMEVNEKTPKIGKIAARDIRC 432
Query: 388 ENV-TMAARLEGIAGDPFTGICISNVTIEL 416
ENV + A L G+ P I + N+T+
Sbjct: 433 ENVKNIFACLYGLPEMPVEEIVLENITLNF 462
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 215/471 (45%), Gaps = 82/471 (17%)
Query: 16 ILLVGIIISLNTNGVESR--KARNSDWFEYSAISCRA---HSASLEEFGGVGDGTTSNTK 70
+L+ I++S++T E+R + FE AI + S+ +FGG+ DG T NT
Sbjct: 9 FVLLYILLSVSTAKAENRYNHLYKNLPFEMPAIQRPVFPDNKVSITDFGGIPDGITLNTD 68
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
AF A+D LS ++GG LFVP G W TG S+ L L K A++L S D +P++
Sbjct: 69 AFAKAMDALS---NKGGGTLFVPSGVWYTGPIVFKSNINLHLEKGALILFSADFNLYPLV 125
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------------WRK 178
+ G DT R S I G NL ++ ITG+ G+I+G GE W W+K
Sbjct: 126 N---TVFEGLDTR--RCQSPISGRNLENIAITGE-GSINGSGEAWRPLKKSKVTEIHWKK 179
Query: 179 F---------------RAGELK------------------------YTRPYLIEIMYSQN 199
G LK + RP ++ + +N
Sbjct: 180 VINSGGVVKDGNYWFPSKGSLKGLEISDMNVPRHDLTEAEWMEIKDFLRPVMVSFIECKN 239
Query: 200 IQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS 259
+ + + NSPSWN+HP+ +VI+ + + P + N DG++ +SC N+ I +
Sbjct: 240 VLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLESCKNSIIVNSIFDV 299
Query: 260 GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITA 319
GDD + +KSG D+ G PT+ ++I + +GSEMSG ++++ +
Sbjct: 300 GDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFV-VGSEMSGSVRNILVSNCQF 358
Query: 320 IDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-WAFWITGSYG------SHPDNNYDP- 371
+ ++ G+R K+ GRGG V+++Y+R + M + +F YG S D + P
Sbjct: 359 LGTDVGLRFKSCRGRGGVVENIYIRDINMFDIATESFLFDLYYGGKSAVESLEDGDTIPV 418
Query: 372 --------HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
P +NI +++V+ N A G+ I + +VTI
Sbjct: 419 TSTILAVDETTPAFKNIYVKNLVSRNARRAMFFNGLPEMKIENINVEDVTI 469
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 199/410 (48%), Gaps = 55/410 (13%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S + FG G G T A + AID + GG ++ VP G +L+G+ L S+ L
Sbjct: 23 SFDVTAFGADGSGKKDATGAIQKAIDQAHK---AGGGRVAVPEGVFLSGALRLKSNVELH 79
Query: 112 LHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L + AV+ SQ+ +++ PV+ R E YS LI+ ++ ITG GT+DG
Sbjct: 80 LAQGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEAENIAITG-KGTLDG 133
Query: 171 QG--ELWW-------------------------------RKFRAGELKYTRPYLIEIMYS 197
QG E WW R+F G Y RP I+
Sbjct: 134 QGDDEHWWPWKRGTNGQSSQEKDRNALFEMAERGVPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
++I I + ++NSP W VHPV +V V GI ++ PNTDG+NP+SC N I+ C+
Sbjct: 192 KDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED- 316
SGDDC+AVKSG + MP++ ++I V +GSE+SGG+++V AE
Sbjct: 250 DSGDDCIAVKSGRNADARRINMPSENIVIEHNEMKDGHGGV-TIGSEISGGVKNVIAEGN 308
Query: 317 -ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL 374
+ + + + +RIKT RGG ++++Y + T+K++K I Y ++
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK---- 364
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PV++NI+ + + R+ P TG+ +++ I+ + P +L+
Sbjct: 365 PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPMELK 414
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 209/412 (50%), Gaps = 58/412 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +G VGDG NT+AF+AAI R GG + VP G++LTG+ +L S L +
Sbjct: 19 TITHYGAVGDGQKMNTEAFRAAIAACHR---AGGGHVLVPEGRFLTGAIHLRSGVDLHVT 75
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A + S D +++ PV+ + R TE YS I+ +V +TG GT+DGQ
Sbjct: 76 EGATIAFSPDPRDFLPVV-----FTRWEGTECYNYSPFIYAYGERNVAVTGP-GTLDGQA 129
Query: 173 EL--WWRKFRA--------------------------GELKYTRPYLIEIMYSQNIQISN 204
L W +R+ G+ Y RP +++ +N+ +S
Sbjct: 130 RLGPWESWYRSSGPQGPDQSLLRRMGSAGVPVAERVFGDGHYLRPKMVQFYRCRNVLVSG 189
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
LT+++ P W VHPV S++V V+ IT+ + T NTDG +P+ C++ I C + DDCV
Sbjct: 190 LTIVDPPMWTVHPVLSTNVTVRDITVDS--TLYNTDGCDPECCSDVLITGCRFNTNDDCV 247
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTC-ISPFSAVIALGSEMSGGIQDVRAE--DITAID 321
AVKSG D+ G G+P++ +++R C S + +GSEMSGG++DV AE +I + D
Sbjct: 248 AVKSGRDEDGHRVGVPSRNIVVR--DCWFSGRWGGMTVGSEMSGGVRDVFAENCEINSPD 305
Query: 322 ------SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL 374
+ + +K + RGG++ V++R T ++++ A ++ +Y N + L
Sbjct: 306 FPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAVFVNMNY-----NGGEGGTL 360
Query: 375 PV-IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
PV ++NI+ M + +L G+ D G+ +S T P + +
Sbjct: 361 PVSVRNIHMDRMEIDGARAVLQLVGLETDHLRGVSLSRSTFTGILSPDSIAY 412
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 32/395 (8%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ +++EFG GDG +T + AI+ + ++ +P G + + L S L
Sbjct: 81 TLNVKEFGAKGDGVHDDTTMIQCAINSCPK-----NGRVLIPEGCYKISTLFLKSDLRLE 135
Query: 112 LHKDAVLLASQDEKEWPVIE-PLPSYGRGRDTEGGR--------YSSLIFGTNLTDVVIT 162
L + AVL A D ++P++ + S+ + G ++ +I G N+++V IT
Sbjct: 136 LGRGAVLSAFTDRSKFPILPGRIESFDETEEYNLGSWEGNPLDSFAGIITGINVSNVEIT 195
Query: 163 GDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
G+ GTIDG + WW + + + RP LI + + NI + +T+ NSP WN+HP +S
Sbjct: 196 GE-GTIDGCADETNWWNNPKVRNIAW-RPRLIFLNHCNNITVQGITVKNSPCWNIHPYFS 253
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
+ +TIL P SPNTDG++P+SC N I Y GDDC+A+KSG G + P
Sbjct: 254 DDLKFVDLTILNPKDSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRP 313
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338
++ L IR+ C+ I +GSEM+GG++++ + I ++ G+RIKT GRG +
Sbjct: 314 SENLEIRQ-CCMRDGHGSITIGSEMAGGVKNLTVRECLFIHTDRGLRIKTRRGRGKDAII 372
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPD------NNYDPHAL----PVIQNINYRDMVAE 388
V + M + I Y PD + +P+ + P I + +R++
Sbjct: 373 DGVLFENIRMDHVMTPVVINCFYFCDPDGHSEYVQSKNPYEVDDRTPHIGELTFRNLDCT 432
Query: 389 NVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKK 422
N AA + G+ I NV I P K
Sbjct: 433 NCHAAASYMYGLPEQKIEKITFENVNISFAENPIK 467
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 168/339 (49%), Gaps = 43/339 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL E+GG+G+G T NT+AF AAI LS GG L VP G WLTG L S+ L +
Sbjct: 51 SLAEYGGIGNGMTLNTQAFAAAIADLSE---RGGGHLIVPEGIWLTGPIVLKSNIDLHVL 107
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A++L + D+ ++P++ P T G R S I + ++ ITG+ G DG GE
Sbjct: 108 KNAIVLFTPDKTQYPLLSP------DEGTSGSRCQSPISAYHESNFSITGE-GVFDGNGE 160
Query: 174 LW------------WRKF------------------RAGELKYTRPYLIEIMYSQNIQIS 203
LW W F + +L RP ++ + + + +
Sbjct: 161 LWRPVKRFKVSNAEWNSFIKTGGTVKQDGAIWYPETSSEKLAKKRPRMVRFVRCERVLLQ 220
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
+ NSPS++V+ + S +++V GI + P + N DGI+ SCTN I +C + +GDD
Sbjct: 221 GVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGIDLSSCTNALIVNCAVDAGDDA 280
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323
+ +KSG G G P +II T + +GS+ GGI V + ID++
Sbjct: 281 ICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFV-IGSDTGGGIDRVSVRNCRFIDTD 338
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSY 361
+G+R K+ GRGG V +VYV + M + +A W Y
Sbjct: 339 TGLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYY 377
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 196/415 (47%), Gaps = 79/415 (19%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ E G V DG T NT+AF AID ++ S+GG ++ VP G WLTG S+ L L
Sbjct: 61 SILEHGAVSDGVTKNTEAFAKAIDAVA---SKGGGKVLVPRGIWLTGPIQFKSNINLHLE 117
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A++L S+D ++P+IE + G +T R S I+ + ++ ITG GT+DG G+
Sbjct: 118 AGALILFSKDFDDYPLIE---TSFEGLNTV--RCISPIYADGVENIAITG-TGTLDGNGD 171
Query: 174 LW------------WRKFRAG------------------------------------ELK 185
W W+ A EL+
Sbjct: 172 AWRPVKKSKMTSSQWKSLLASGGLLNEKGDMWFPSESSIKGYQASSNFNVPDLIDPSELE 231
Query: 186 ----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
+ RP ++ I S+ I + T NSP+WN+HP+ S +I++ + + P S N DG
Sbjct: 232 TVKDFLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDG 291
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
++ +SC N I D GDD + KSG DQ G GMPT+ ++++ + +
Sbjct: 292 LDLESCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGFV-I 350
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWAFW 356
GSEMSGG+++V D T + ++ G+R K+ GRGG V+++Y+ + M + + +
Sbjct: 351 GSEMSGGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMINIPTDVINFNLF 410
Query: 357 ITGSY------GSHPDNNYDPHALPV------IQNINYRDMVAENVTMAARLEGI 399
G+ S D D A+PV +NI +++ A +AA +G+
Sbjct: 411 YGGNSPVLEADQSAEDEARDEVAVPVSETTPSFKNIFMKNIKATGSGVAANFQGL 465
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 190/377 (50%), Gaps = 38/377 (10%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
EY +++ ++++FG G G +T + +AAI ++ +P G +LT
Sbjct: 78 EYESVTL-----NVKDFGATGTGEKHDTASLQAAI-----MSCPPSGRVLIPEGTYLTAP 127
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGGR---YSSLIF 152
L S+ TL + K A LL S +++P++ G+D EG ++SL+
Sbjct: 128 LYLKSNITLEIQKGAKLLGSNVREDYPILPGTTKTTDGKDEFYLGSWEGDPMDCFASLLT 187
Query: 153 GTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
G + +V I G G IDG WW+ + + + RP LI I ++I I +T+ NS
Sbjct: 188 GIGVNNVKIIG-KGIIDGNASFDNWWKDAKKKRVAW-RPRLIFIKNCRDILIEEVTVQNS 245
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
PSW +HP++S ++ + + ++ P SPNTDGINP+SC N +I GDDC+A+KSG
Sbjct: 246 PSWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGK 305
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
G + ++ ++IR C F I +GSEM+GG+++V A +++ G+RIK
Sbjct: 306 LYLGQRLKIASQDIMIR--NCHMKFGHGGIVIGSEMAGGVKNVSAIRCIFEETDRGIRIK 363
Query: 330 TAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVI 377
T GRG G + + + MK + F I Y PD + PV+
Sbjct: 364 TRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPDGKTEYVWSKEKLPVDERTPVV 423
Query: 378 QNINYRDMVAENVTMAA 394
+N+ ++M+ E+ +AA
Sbjct: 424 KNVYLKNMICEDCEVAA 440
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 126/204 (61%)
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TD + DSC+N IED I D +++KSGWD YGI G P + I R+ + A
Sbjct: 137 TDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 196
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
+A GSEMSGGI D+ + + S G+ KTA GRGG+++DV + + M+ + A T
Sbjct: 197 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 256
Query: 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
G + +HPDN++DP ALP+I I ++MV N+++A L GI GDPFT IC+SN++ L +
Sbjct: 257 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 316
Query: 419 KPKKLQWNCTDITGISSGVTPKPC 442
+ W+C++I+G S V P+PC
Sbjct: 317 STQSSSWSCSNISGYSELVFPEPC 340
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 86/112 (76%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
HS ++ EFG VGDG T NT F+ AI +L F +GG+QL+VP G+WLTGSFNLTSH T+
Sbjct: 31 HSVTISEFGAVGDGVTVNTLPFQNAIFYLRSFADKGGAQLYVPRGRWLTGSFNLTSHLTI 90
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
FL KDAV++ +++ EWP++EPLPSYG+G D G R+ SLI G N+TDVVIT
Sbjct: 91 FLEKDAVIIGAKEVSEWPIVEPLPSYGQGIDLPGARHRSLINGHNVTDVVIT 142
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 198/417 (47%), Gaps = 57/417 (13%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + +FG +GDG T NT AFK AI+ + EGG ++ VP G +LTG+ L S+
Sbjct: 47 RKKDYLVTDFGAIGDGKTKNTGAFKKAIE---KCNVEGGGRVVVPKGIFLTGAIYLKSNV 103
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L + + A +L SQD ++P++ + R E YSSLI+ ++ ITG GT+
Sbjct: 104 DLHISEGATILFSQDSNDYPIV-----FTRWEGMECMNYSSLIYAHEEENIAITG-KGTL 157
Query: 169 DGQ--GELWW-----------------------------------RKFRAGELKYTRPYL 191
DG + WW R+ G+ Y RP
Sbjct: 158 DGNSDNDHWWFWCGAKKYGWNESRPGRQNPARAKLHEYMAQKKDPRERIFGDGYYLRPNF 217
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
++ S+N ++++ + NSP WN++PV +V+++ + +++ PN DG +P++C N
Sbjct: 218 VQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDPEACKNVW 275
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
I+D Y +GDDC+A+KSG D+ G G P + II V+ +GSE++GG ++
Sbjct: 276 IKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKDGHGGVV-IGSEIAGGAKN 334
Query: 312 VRA--EDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
+ A + + + E +RIKT+ RGG +++V+ + K A + P N
Sbjct: 335 IYAIGNVMDSKNLERALRIKTSSNRGGIIENVFFYNTKVGAYKEAAVRFNMHYEKPGN-- 392
Query: 370 DPHALPVIQNINYRDMVAENVTMAARL-EGIAGDPFTGICISNVTIELTNKPKKLQW 425
+P I+NI ++ E A L + P T + N I P K+ +
Sbjct: 393 ---FIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKINNVEIPYKVDF 446
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 163/327 (49%), Gaps = 43/327 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+++FGG GDG +N+ AF A +SR GG +L VP G W +G + S TL L +
Sbjct: 6 IDDFGGKGDGKFNNSNAFALAFAEISR---NGGGKLTVPKGVWASGPIEIPSDTTLELEE 62
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
+ + D + P + R E L+ ++ +V ITG GT++G GE
Sbjct: 63 GSEISFIPDPNLY-----TPVFTRWEGVECFAMHPLVLSSHTKNVRITG-KGTLNGNGET 116
Query: 175 WWRKFRAG---------------------------------ELKYTRPYLIEIMYSQNIQ 201
WW +A E+++ RP L+EI +++N+
Sbjct: 117 WWNLKKAKKERGQSAPEDMYEKILAELNPGYENQPGGGGGREIQFLRPSLLEISFAENVS 176
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+ + + +SP W VHP+Y ++ ++GI I P T+PNTDGI+ DSC N IEDC++ GD
Sbjct: 177 VEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGIDVDSCENVVIEDCFVSVGD 236
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
D + +KSG GI PT + IR T + ++ +GSE + G+ + A
Sbjct: 237 DGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHGGIV-IGSETAAGMSHIHAVGCDLSG 295
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTM 348
++ G+RIK+ GRGG + D+ +R M M
Sbjct: 296 TDRGIRIKSRRGRGGDIFDIELRDMVM 322
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 55/410 (13%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S + FG +G +T+A + AID + GG ++ VP G +L+G+ L S+ L
Sbjct: 23 SFDVTSFGADENGKNDSTEAIQKAID---QAHQAGGGRVTVPEGVFLSGALRLKSNVDLH 79
Query: 112 LHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K AV+ SQ+ +++ PV+ R E YS LI+ ++ ITG GT+DG
Sbjct: 80 IAKGAVIKFSQNPEDYLPVV-----LTRFEGVELYNYSPLIYAYEADNIAITG-KGTLDG 133
Query: 171 QG--ELWW-------------------------------RKFRAGELKYTRPYLIEIMYS 197
QG E WW R+F G Y RP I+
Sbjct: 134 QGDDEHWWPWKRGTNGQPSQEKDRNALFEMAERGIPVTERQFGKGH--YLRPNFIQPYRC 191
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
++I I +T++NSP W VHPV +V V GI ++ PNTDG+NP+SC N I+ C+
Sbjct: 192 KHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHF 249
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED- 316
+GDDC+AVKSG + G +P++ ++I V +GSE+SGG+++V AE
Sbjct: 250 DNGDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHGGV-TIGSEISGGVKNVIAEGN 308
Query: 317 -ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHAL 374
+ + + + +RIKT RGG ++++Y + T+K++K I Y ++
Sbjct: 309 LMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEEGDAGDFK---- 364
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PV++ ++ + + + R+ P TG+ +++ I+ + P +L+
Sbjct: 365 PVVRTVDVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEIDGVDVPMELK 414
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 126/194 (64%), Gaps = 2/194 (1%)
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DGI+PDS ++ IED YI +GDD VAVKSGWDQYGI Y P+ + IRRLT SPF+ I
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPFAG-I 59
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG 359
A+GSE SGG+ +V AE IT + G+ +KT +GRGG ++++ V + M ++ I+
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 360 SYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE-LTN 418
G HPD NY+P+ALPV++++ +++ + V A + G+ PFT IC+SN+ ++
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 419 KPKKLQWNCTDITG 432
+ + W C+ ++G
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 197/392 (50%), Gaps = 23/392 (5%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
++ A S ++ +G GDG T +T A + AID + + GG+ + +++G L
Sbjct: 16 LAFAAKSCDVKAYGATGDGVTKDTAAIQKAIDDCA--AAGGGTVVLAGAPMYVSGPLVLK 73
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
SH TL + L S++ ++P+IE L GR L+ TD+ I G
Sbjct: 74 SHITLSIATGTTLAGSEEHDDYPLIEELRESGR---------QPLLSSDKATDITING-G 123
Query: 166 GTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GTIDG+G+ WW A RP LI +S +I + N+T+ NSPSW + P YS+ ++
Sbjct: 124 GTIDGRGQSWWPDRSAAN---KRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVF 180
Query: 226 QGITILAP-VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
+ +T+ AP S NTDGI+P S ++ IE I +GDD +A+KSG P+ +
Sbjct: 181 RNMTVYAPDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPN-SPGGDEPSHDI 239
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
+IR T + +++GSE++GG+ +V AE I + +GVRIK+ RG +K R
Sbjct: 240 VIRDSTFLHGHG--LSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYR 297
Query: 345 RMTMKTMKWAFWITGSYGSHPDN-NYDP--HALPVIQNINYRDMVAENVTMAARLEGIAG 401
+ M+ + I+ Y PD + P P +I ++ A AA + G+
Sbjct: 298 DLKMEDVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPE 357
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
P TG+ ++NV I+ +K +++ D G
Sbjct: 358 SPVTGLKLTNVRIK-ADKGAVIKYAHMDTKGF 388
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 174/350 (49%), Gaps = 24/350 (6%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGR 138
L + GG ++ VP G TG+ L S L L A+L D +P +E R
Sbjct: 24 LDEAAAAGGGRVSVPAGVHRTGALRLRSGVELHLEAGALLQFVPDPALYPAVE-----AR 78
Query: 139 GRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA--GELKYTRPYLIEIMY 196
G +S ++ DV ITG GTIDG G+ WW FR EL + RP LI +
Sbjct: 79 WEGAVGRVHSPCLYAHGERDVAITG-LGTIDGGGQTWWDTFRHRREELAHPRPTLIGLHE 137
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
+ + I ++ L NSP+W VHP V + + I P SPNTDGI+P+SC N RI DC+
Sbjct: 138 CERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNTDGIDPESCRNVRISDCH 197
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
I GDDC+A+K+G ++ + T+ + I T + V+ +GSEMSGG+++V +
Sbjct: 198 IDVGDDCIALKAGTER--TPDRVATENVTITGCTMVRGHGGVV-IGSEMSGGVRNVVISN 254
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH---- 372
++ G+R+KT RGG V++V V + M + + Y PD +PH
Sbjct: 255 CVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPFYFCGPDGK-EPHVGDR 313
Query: 373 -------ALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTI 414
P +++++ + A NV +A + G+ P + + +V+I
Sbjct: 314 TARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSLHDVSI 363
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 200/439 (45%), Gaps = 76/439 (17%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
E A + +L++FG VGDGTT T+AF AID LS +GG +L VP G W TG
Sbjct: 42 ELKAPAIPDRQVNLKDFGAVGDGTTLCTEAFAKAIDKLS---EQGGGKLIVPGGVWFTGP 98
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L L AV+ S DE +PVI+ + G +T R S + ++ I
Sbjct: 99 IVLKSNINLHLEVGAVIQFSGDESLYPVIK---TSFEGLETR--RCQSPLSANGAKNIAI 153
Query: 162 TGDNGTIDGQGELW------------WRKF--RAGEL----------------------- 184
TG G IDG G+ W W++ R G +
Sbjct: 154 TG-QGVIDGNGQFWRPVKRGKVTDGQWKEILARPGGVEAKKGYWVPNQAYADAEKNADMN 212
Query: 185 --------------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
++ RP ++ ++ +N+ + ++ NSP+WN+HP+ +VI+ G+
Sbjct: 213 VPRAETDEEWNAIKRFLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLA 272
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
P + N D ++ +SC N + + +GDD + +KSG D+ G G P + +++ T
Sbjct: 273 RNPSYAQNGDALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCT 332
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
+ + +GSEMSGG++++ + + ++ G+R K+ GRGG V+++++ ++M
Sbjct: 333 VFAGHGGFV-VGSEMSGGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTD 391
Query: 351 MKWAFWITGSY------------GSHPDNNYD---PHALPVIQNINYRDMVAENVTMAAR 395
+K Y G +PDN P+ ++I+ R++V A
Sbjct: 392 IKTDAITFNMYYGGKSVAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAME 451
Query: 396 LEGIAGDPFTGICISNVTI 414
G+ P I + NV I
Sbjct: 452 FNGLPEMPIENINLENVHI 470
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 206/446 (46%), Gaps = 76/446 (17%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
E S S + ++ +FG + DG T NT+A AI +S S+GG ++ +P G WLTG
Sbjct: 48 EVSKPSFPDYEVNIRDFGALSDGVTLNTEAINNAIKTVS---SKGGGKVIIPEGLWLTGP 104
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L+ K+A+++ S D +P+IE + G DT+ R S I N ++ I
Sbjct: 105 VVLLSNVNLYTEKNALIVFSSDTSLYPIIE---ASFEGLDTK--RCQSPISAMNAENIAI 159
Query: 162 TGDNGTIDGQGELW------------WRKF----------------RAGELK-------- 185
TG +G DG G+ W W+ AG LK
Sbjct: 160 TG-SGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQ 218
Query: 186 -----------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+ RP ++ I+ S+ I + +T NSP W +HP+ S+ + +
Sbjct: 219 NSGQKEITDEEWIYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDV 278
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ P S N D ++ +SC N + +C+ +GDD + +KSG D+ G G P + +II+
Sbjct: 279 KVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN 338
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
T + + +GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ + M
Sbjct: 339 NTVLHGHGGFV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM 397
Query: 349 -------KTMKWAFWITGSYGSH-PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
TM + + S + PD N PV +NI +++ A G+
Sbjct: 398 IDIPNDALTMDLYYAVNDSPETPIPDVN---EETPVFRNIYISNVLCRGAGRAVYFNGLP 454
Query: 401 GDPFTGICISNVTIELTNKPKKLQWN 426
P I I N+T+ TN K + N
Sbjct: 455 EMPLKNILIKNMTV--TNAKKGIVIN 478
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 202/403 (50%), Gaps = 49/403 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FG G +T AF+ AI+ +S + GG ++ +P G++LTG+ +L S+ L +
Sbjct: 74 SITDFGADPTGEHLSTAAFRDAIEEVS---AAGGGRVVIPAGEFLTGAIHLRSNVELHVG 130
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AV+ SQ+ + LP+ Y R E YS I+ + +V ITG +G +DGQ
Sbjct: 131 SGAVVRFSQNPDHY-----LPAVYTRWEGVELYNYSPFIYARGVENVAITG-SGVLDGQA 184
Query: 173 E--LWW--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISN 204
+ WW R+F AG + RP ++ S+NI +
Sbjct: 185 DEKHWWNWSGSTQAEDRETLFRMGEQGVPVEQRRFGAGH--HLRPNFVQFYDSRNILVQG 242
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+TL NSP W +HPV S ++ V G+ + +P PN DG+NP+S + I++ +GDDC+
Sbjct: 243 VTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESSRDVVIKNSRFDNGDDCI 301
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-- 322
A+KSG + G G+P++ ++I V+ +GSEMSG +++V A+ +DS
Sbjct: 302 AIKSGRNADGRRIGVPSENILIENNHMQDGHGGVV-MGSEMSGSVRNVFAQH-NVMDSPN 359
Query: 323 -ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNIN 381
+RIKT RGG V++VY R T+ + + D+ PH P+++NI+
Sbjct: 360 LHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEADSG--PHT-PIVRNIH 416
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
D+ ++N A L G P + + +++ P+ L+
Sbjct: 417 IEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGVEHPQLLE 459
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 177/345 (51%), Gaps = 60/345 (17%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ E+G VGDG T+N++AFKAAI+ +S ++GG ++ VP G WLTG L + L L
Sbjct: 52 SIMEYGAVGDGLTNNSQAFKAAIEEVS---NQGGGKVLVPRGIWLTGPITLLDNVNLHLE 108
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+++ S+++ E+P++E + G +T R S I + ++ ITG NGTIDG GE
Sbjct: 109 DGSLITFSKNKDEYPLVE---TSFEGLNT--FRCLSPINAYRVENIAITG-NGTIDGSGE 162
Query: 174 LW------------WRKFRAG----------------------------------ELK-- 185
W W + + EL+
Sbjct: 163 AWRAVKRSKMTDSQWNELVSSGGIVVGTNWFPSQSFLDGHNASSSFNVPDVTDRKELEKM 222
Query: 186 --YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
+ RP ++ I S+ + + T NSP+WN+HP+ S VI++ +T+ P S N DG++
Sbjct: 223 KDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLD 282
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
+SC N I + GDD + KSG D G GMPT+ +I++ + +GS
Sbjct: 283 LESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKN-NIVYHGHGGFTVGS 341
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
EMSGGI++V + T + ++ G+R K+ GRGG V+++++ ++ M
Sbjct: 342 EMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINM 386
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 197/430 (45%), Gaps = 77/430 (17%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
SL +FG VG+G T+AF+ AI+ LS S GG L VP G WLTG L S+ L
Sbjct: 48 KVSLPDFGAVGNGVELCTEAFEKAIETLS---SRGGGHLIVPAGIWLTGPIVLKSNIDLH 104
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ K AV+L S D + +P++E + G DT R S + G NLT+V ITG G IDG
Sbjct: 105 IEKGAVVLFSPDVELYPLVE---TVFEGLDTR--RCQSPVSGRNLTNVAITGQ-GAIDGN 158
Query: 172 GELW------------WRK--FRAGELK-------------------------------- 185
G W W++ R G K
Sbjct: 159 GHFWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLTTEEEW 218
Query: 186 -----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+++ + + P + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 278
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
G++ +SC N I + GDD + +KSG D+ G + +++ T +
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFV- 337
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWAF 355
+GSEMSGG+++V + + ++ G+R K+ GRGG V++++VR ++M + + +
Sbjct: 338 VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNL 397
Query: 356 WITG-------SYGSHPDNNYDP----HALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ G G DP P +NI+ ++V N A GI P
Sbjct: 398 YYGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPI 457
Query: 405 TGICISNVTI 414
GI + N+ I
Sbjct: 458 DGITLENLDI 467
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 62/347 (17%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL E+GGVGDG T NT+ F+ AI+HLS ++GG L VP G WLTG L SH L L
Sbjct: 37 SLTEYGGVGDGITLNTECFREAIEHLS---AKGGGTLVVPTGIWLTGPIRLKSHIELHLE 93
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A+L+ + D +P + R + S I N +D+ ITG+ G IDG G+
Sbjct: 94 KNALLIFTSDFWSYPSRSTFFTEVFYRQLQ-----SPISAYNESDIAITGE-GVIDGSGQ 147
Query: 174 LW------------WRKFR--------AGEL----------------------------- 184
W W + AG +
Sbjct: 148 DWRPVRKNKVTVDEWEHLQRKSGVLNDAGTIWYPMADDVQRYARREENIIHKYNTPDEWV 207
Query: 185 ---KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
Y RP L+ + + + + + +T NSP WN+HP +IV G+ + P S N DG
Sbjct: 208 RLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDG 267
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
++ +SC N + GDD V +KSG ++ G GMP K +++ T + +
Sbjct: 268 LDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHGGFV-V 326
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
GSEMSGG+ + + +++++G+R K+ RGG V D+Y++ + M
Sbjct: 327 GSEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYM 373
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 179/388 (46%), Gaps = 64/388 (16%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVL-LASQDEKEW 127
T++ KAAI ++GG ++ +P G++ T + +L S+ L L K AVL + E
Sbjct: 566 TESLKAAIQAC---HTDGGGRVVIPKGEYYTAAIHLLSNVNLHLEKGAVLRFLTSPEDYL 622
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWR-------- 177
PV+ R + S LI+ T+V ITG GT+DGQ + WW
Sbjct: 623 PVV-----VSRWEGVDCRTLSPLIYANGQTNVAITG-AGTLDGQASRDNWWSWKGRKSSS 676
Query: 178 ----KFRAGELKY--------------------TRPYLIEIMYSQNIQISNLTLINSPSW 213
+ + G+ K RP I+ + + +T+I SP W
Sbjct: 677 EQNTEAKVGKDKLLWMEQNRISLDERIFSVNDKLRPPFIQFYRCNRVLVEGVTIIRSPFW 736
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
+HP+ S +VIV+G+ + PN DG +P+SC N IE C +GDDCVA+KSG +
Sbjct: 737 MLHPLLSKNVIVRGVKFDS--HGPNNDGCDPESCENVLIESCDFNNGDDCVAIKSGKNND 794
Query: 274 GIAYGMPTKQLIIRRLTCI-SPFSAVIALGSEMSGGIQDVRAEDITAIDSES---GVRIK 329
G + +P++ +I+R CI A +A+GSE+SG DV D +DS S +RIK
Sbjct: 795 GRTWNLPSRNIIVR--NCIMRDGHAGVAVGSEISGSCYDVWVRD-CVMDSPSMDRPLRIK 851
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
+ RGG V Y R + + K A + Y Y+P +R++ E
Sbjct: 852 SNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQSGPYNP---------VFRNIYLE 902
Query: 389 NVTMAARLEGIAGDPFTG-ICISNVTIE 415
NVT GI + F I I NV ++
Sbjct: 903 NVTCKKSSYGILIEGFEDRISIFNVRLK 930
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 202/443 (45%), Gaps = 70/443 (15%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
E S S + ++ +FG + DG T NT+A AI +S S+GG ++ +P G WLTG
Sbjct: 48 EVSQPSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGP 104
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L+ K+A+++ S D +P+I+ + G DT+ R S I N ++ I
Sbjct: 105 VVLLSNVNLYAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAI 159
Query: 162 TGDNGTIDGQGELW------------WRKF----------------RAGELK-------- 185
TG NG DG G+ W W+ AG LK
Sbjct: 160 TG-NGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQ 218
Query: 186 -----------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+ RP ++ I+ S+ I + +T NSP W +HP+ S+ + +
Sbjct: 219 NNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDV 278
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ P S N D ++ +SC N + +C+ +GDD + +KSG D+ G G P + +II+
Sbjct: 279 KVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN 338
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
T + + +GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ + M
Sbjct: 339 NTVLHGHGGFV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM 397
Query: 349 KTMKWAFWITGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ Y + D P PV +NI +++ A G+ P
Sbjct: 398 IDISNDALTMDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMP 457
Query: 404 FTGICISNVTIELTNKPKKLQWN 426
I I N+T+ TN K + N
Sbjct: 458 LKNIFIKNMTV--TNAKKGIVIN 478
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 179/365 (49%), Gaps = 33/365 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG GDG +T +AAI S++ +P G + S L + + L +
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAI-----MACPEKSRVLIPAGTYRIVSLFLKDNVNIELAE 138
Query: 115 DAVLLASQDEKEWPVIEPL-PSYGRGRDTEGG--------RYSSLIFGTNLTDVVITGDN 165
AVL A D +PV + + SY + G ++ +I G N+ + VI G
Sbjct: 139 GAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIITGVNVKEAVIYG-Q 197
Query: 166 GTIDGQGEL----WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
G IDG WW + + RP +I + + + + +T+ NSPSWN+HP +S
Sbjct: 198 GIIDGNAGTGEGNWWHEPKVIHTA-CRPRMIFLERCRQVTVQGITVRNSPSWNIHPYFSD 256
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ + +L+P SPNTDG++P+SC + I GDDC+AVKSG G Y P+
Sbjct: 257 HLRFFDLKVLSPKDSPNTDGLDPESCKDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKCPS 316
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVK 339
K + IRR C+ + +GSEM+GG++D+ +D + ++ G+RIKT GRG V
Sbjct: 317 KNISIRR-CCMRDGHGSVTIGSEMAGGVKDLTVKDCMFLHTDRGLRIKTRRGRGKDAVVD 375
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV------IQNINYRDMVAEN 389
+ + M + F I Y PD + + ALPV I+++ +RD+ AEN
Sbjct: 376 KIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALPVDDKTPFIKSLCFRDIEAEN 435
Query: 390 VTMAA 394
+AA
Sbjct: 436 CHVAA 440
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 190/428 (44%), Gaps = 78/428 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
H+ ++ ++G VGDG NT+AF AI+ ++ GG L +PPG WLTG L S L
Sbjct: 19 HTVTITDYGAVGDGVYDNTQAFHQAIEACAK---AGGGTLVIPPGIWLTGPIKLQSRIEL 75
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
A ++ S+ +++P+ L S GR R S + G L DV ITG G DG
Sbjct: 76 HASAGAFVMFSKFFEDYPI---LMSTYEGRQMF--RCQSPLDGEGLEDVAITG-GGIFDG 129
Query: 171 QGELWWRKFRAGEL---------------------------------------------- 184
GE W R + G+L
Sbjct: 130 SGEAW-RPVKRGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 185 ------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
Y RP L+ + + I +S T NS +W +HP S + +Q IT+ P + N
Sbjct: 189 DYEPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ DSC +E+ GDD + +KSG ++ G G P++++ IR T +
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGI 308
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-----TMKW 353
+ +GSEMSGGI+DV D T I ++ G+R K+ GRGG V+++ + R+ M+ + +
Sbjct: 309 V-VGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 354 AFWITGSYGSHPDNNYDPHAL-------PVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
+ G GS Y + PV +NI +D+V A + G+ P
Sbjct: 368 NLYYEGKAGS---GEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVEN 424
Query: 407 ICISNVTI 414
+ + I
Sbjct: 425 LTVKRSAI 432
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 187/368 (50%), Gaps = 33/368 (8%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ ++ +FG GDG +T +AAI + ++ VP G + S L L
Sbjct: 101 TLNVRDFGAKGDGVQDDTGFIQAAIMCCPK-----NGRVLVPEGIYRVSSLFLKDDLRLE 155
Query: 112 LHKDAVLLASQDEKEWPVIEPL-PSYGRGRDTEGGR--------YSSLIFGTNLTDVVIT 162
+ K AVL A D ++PV++ L SY + G +S++I G N+ +VV+
Sbjct: 156 IGKGAVLSAFTDRTKFPVLKGLIDSYDEKEEYNLGSWEGNPLDMFSAIITGINVKNVVLY 215
Query: 163 GDNGTIDG----QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
G G I+G + + WW + + + RP +I + + +++ + + + NSPSWN+HP
Sbjct: 216 G-QGLIEGNAGYEEDNWWYNAKVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSWNIHPY 273
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+S+ + +T+L P SPNTDG++P+SC + I Y GDDC+A+KSG G Y
Sbjct: 274 FSNHLRFLDLTVLNPKDSPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYR 333
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--G 336
+P++ ++IR+ C+ I +GSEM+GG++ + +D + ++ G+RIKT GRG
Sbjct: 334 VPSEDIVIRQ-CCMRDGHGSITIGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRGEAA 392
Query: 337 FVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA----------LPVIQNINYRDMV 386
+ + + M + F I Y PD + + A P ++ + +R++
Sbjct: 393 VIDGILFEHIRMDHVMTPFVINCFYYCDPDGHSEYVATKEMLPIDERTPYVKELVFRNIE 452
Query: 387 AENVTMAA 394
A N +AA
Sbjct: 453 ASNCHVAA 460
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 68/402 (16%)
Query: 5 KTAKRTQVICIILLVGIIISLNTNGVESRKARNSDW----FEYSAIS---CRAHSASLEE 57
K + R + II+++ ++ + + VE S + FE IS + ++ +
Sbjct: 3 KNSDRLKWCLIIVMMLPNLACSVHSVEQEDTLKSLYKDVEFEMPVISEPQFPDYVVNISD 62
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG +GDG T N++AF A+ID ++ + GG ++ V G WLTG + S+ L+L AV
Sbjct: 63 FGAIGDGITDNSEAFAASIDDVA---ANGGGKVVVSRGIWLTGPIKMKSNINLYLEDGAV 119
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW-- 175
+L S D ++P+IE + G +T R S I NL ++ TG NG DG G+ W
Sbjct: 120 VLFSSDFDKYPLIE---TSFEGLETY--RCMSPIHAHNLENIAFTG-NGVFDGSGDAWRP 173
Query: 176 ----------WR--------------------KFRAGELK-------------------Y 186
W+ K +AG+ K +
Sbjct: 174 VKKSKMTASQWKNLVESGGVLSDDGKIWYPTEKSKAGDGKDNFNVPDLSSKEEYEKVKDF 233
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP ++ I + + + T NSP+WN+HP+ S +VI++ +TI P S N DG++ +S
Sbjct: 234 LRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGDGLDLES 293
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
C N I + GDD + KSG ++ G GMPT+ +I++ + +GSEMS
Sbjct: 294 CKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFV-VGSEMS 352
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
GG+++V T + +++G+R K+ GRGG V+++Y+ + M
Sbjct: 353 GGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDM 394
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 195/427 (45%), Gaps = 77/427 (18%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L +FG VG+G T AF AI+ LS + GG L VP G WLTG L S+ L + K
Sbjct: 51 LPDFGAVGNGVELCTDAFAKAIETLS---ARGGGYLIVPAGIWLTGPIVLKSNINLHIEK 107
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
AV+L S D + +P++E + G DT R S I G NLT+V ITG G IDG G
Sbjct: 108 GAVILFSPDVELYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITG-QGAIDGNGHY 161
Query: 175 W------------WRK--FRAGELK----------------------------------- 185
W W++ R G K
Sbjct: 162 WRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEEWQSV 221
Query: 186 --YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
+ RP ++ ++ +N+ + NSP+WN+HP+ +V+++ I + P + N DG++
Sbjct: 222 RHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGDGLD 281
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
+SC N I + GDD + +KSG D+ G P + +++ T + +GS
Sbjct: 282 LESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV-VGS 340
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWAFWIT 358
EMSGG+++V + + ++ G+R K+ GRGG V+++++R ++M + + + +
Sbjct: 341 EMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLYYG 400
Query: 359 GS-------YGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
G G DP + P +NI+ ++V N A GI P GI
Sbjct: 401 GKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPIDGI 460
Query: 408 CISNVTI 414
+ N+ I
Sbjct: 461 TLDNLDI 467
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 212/473 (44%), Gaps = 78/473 (16%)
Query: 11 QVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISC-RAHSASLEEFGGVGDGTTSNT 69
Q++ IL + ++IS G +++KA + D A + + + ++ ++G DG T NT
Sbjct: 3 QIVSAILAIPLLISTFQAGAQNKKAYSFDNLPVIAKTFFKKDTINILKYGAKNDGITLNT 62
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
K+ AI ++ GG + +P G WLTG L S+ L L K+A+L ++D ++P+
Sbjct: 63 KSINQAITDCNK---RGGGVVVIPEGLWLTGPIELKSNVNLHLKKNALLQFTKDMDQYPL 119
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------------WR 177
+E G R S I+ +N ++ ITG G +DG GE W W+
Sbjct: 120 VE-----GNWEGLPQMRNQSPIWASNQQNIAITG-YGIVDGGGEAWRMVKKDKLTESQWK 173
Query: 178 KFRA---------------------------------------GELK-YTRPYLIEIMYS 197
A E+K + RP L+ +
Sbjct: 174 SLLASGGVVGEDNKSWYPSAKSLKGAKMKNAGVITKDKDAAFYAEIKDFLRPNLLVLNRC 233
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+ + + +T NSP+WN+HP+ S + ++ + P + N DG++ +SC N +E
Sbjct: 234 KRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKNVLVEGSTF 293
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
GDD + +KSG D G MPT+ ++IR T + +GSEMSGG +++ D
Sbjct: 294 DVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHGGFV-IGSEMSGGAKNIFISDC 352
Query: 318 TAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK---------TMKWA----FWITGSYGSH 364
T I ++ G+R KT GRGG V+++Y R + MK M +A +TG
Sbjct: 353 TFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVDPVPLTGEKRET 412
Query: 365 PDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P P PV + ++V + A + G+ + I + N+TI+
Sbjct: 413 PKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDNLTIK 465
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 185/371 (49%), Gaps = 36/371 (9%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
++ ++++FG GDG +T A +A+I ++ VP G++L L S+
Sbjct: 52 ESYVLNVKDFGAKGDGLELDTAAVQASIAACPLH-----GRIIVPKGRYLLTPIFLKSNI 106
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE-----------GGRYSSLIFGTNLT 157
T+ L + AVLL +QD ++P+ LP +G E ++SLI G N+
Sbjct: 107 TIELEEGAVLLGAQDRNKYPI---LPGLLKGSSKEEYFLGSWEGDPDDCFASLITGINVE 163
Query: 158 DVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
+V I G NG IDG + WW + + + + RP +I ++ +NI + ++T+ NSPSW +
Sbjct: 164 NVNIIG-NGIIDGNASIDNWWFEAKKKRIAW-RPRMIFLVGCKNILVESVTVKNSPSWTI 221
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP+ S + + I P SPNTDG++P+SC N I GDDC+A+KSG
Sbjct: 222 HPLMSEDLKFINLYIENPKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISK 281
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
MP++ + IR AV+ LGSEMS GI ++ E+ +++ G+RIKT GRG
Sbjct: 282 IKTMPSQHIYIRNCNMNFGHGAVV-LGSEMSSGINNIYVENCLFNETDRGIRIKTRRGRG 340
Query: 336 --GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYR 383
+ ++Y R + M + F I Y D + LP+ I NI +
Sbjct: 341 DTAIIDEIYARNIKMNKVLTPFTINCFYFCDIDGKTEYVWSKEKLPIDDKTPYIGNIYLQ 400
Query: 384 DMVAENVTMAA 394
++ N +AA
Sbjct: 401 NITCLNAQVAA 411
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 180/376 (47%), Gaps = 51/376 (13%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGR 138
+ + S GG L + G + +G L S+ L++ ++A L + D + P + R
Sbjct: 28 IKKLTSVGGGILKLTSGVFFSGPLQLYSNIHLYIEENATLTFNADFSLYK-----PVWTR 82
Query: 139 GRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW---------------------- 176
E LIF + ++ I G +G IDG GE WW
Sbjct: 83 WEGVECWAMHPLIFASKAENITIAG-SGHIDGNGEPWWNSLWQAKAEKRTHPKYPYELQL 141
Query: 177 ----RKFR-------AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
+ +R EL++ RP LI+ + +NI + N+TL NSP WN H + S +
Sbjct: 142 ADLNKDYRNQPSGGGGRELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTI 201
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+ + P +PNTDG+N DSC++ I++C GDDC+ +KSG + GI PT+ ++
Sbjct: 202 TGVHFINPKEAPNTDGLNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENIL 261
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
I T + V+ +GSE +GGI +++ + + +++ G+RIKT GRGG ++++ +
Sbjct: 262 IDSCTMKNGHGGVV-IGSETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEH 320
Query: 346 MTMKTMKWAFWITGSYG------SHPDNNYDPHAL----PVIQNINYRDMVAENVTMAAR 395
MK + + YG S P + DP L P IQNI ++AE+ AA
Sbjct: 321 CYMKNILCPLVVNCYYGPGGPKSSSPIFSLDPQPLSATTPKIQNIYISHLIAEHCRAAAA 380
Query: 396 -LEGIAGDPFTGICIS 410
+ G+ P + IS
Sbjct: 381 FIVGLPEQPIKNLYIS 396
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 170/349 (48%), Gaps = 62/349 (17%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG V DG T NTK+ +AAID + ++GG + VPPG WLTG L S+ L L
Sbjct: 40 ITKFGAVPDGYTLNTKSIQAAIDACT---AKGGGVVAVPPGLWLTGPLTLKSNVNLNLAA 96
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A LL ++D+ ++P+++ E R S I N ++ ITG NG IDG G+
Sbjct: 97 GATLLFTKDKTQYPLVK-----ANWEGFEQMRNQSPISAKNAVNIAITG-NGIIDGNGDA 150
Query: 175 W------------WRKFRA---------------------------GELK---------- 185
W W+ A G L
Sbjct: 151 WRMVKKDKLTESQWKNLVASGGVLAEGGKTWMPSESYAKGNAMKDPGRLSPDKDAAFYQS 210
Query: 186 ---YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
+ RP L+ + + + +T NSP+W +HP+ S ++ V+ + + P + N DGI
Sbjct: 211 VKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQNGDGI 270
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+ +SC+N IE+ GDD + +KSG D G MPTK +IIR T + + +G
Sbjct: 271 DLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGFV-VG 329
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
SEMSGG+ +V + T I S+ G+R KT GRGG V++++++ + MK +
Sbjct: 330 SEMSGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDI 378
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 196/406 (48%), Gaps = 66/406 (16%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L EFG GDG T T AF+ AID R + GG ++ VPPG +LTG+ +L S+ L + +
Sbjct: 57 LTEFGAKGDGRTDCTLAFRRAID---RCTNAGGGRVVVPPGSYLTGAIHLKSNVDLHISE 113
Query: 115 DAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ-- 171
+ SQ+ K++ PV+ + R E YS I+ T++ ITG GT++GQ
Sbjct: 114 GTTVKFSQNPKDYLPVV-----FSRWEGVEVFNYSPFIYAFEQTNIAITG-KGTLNGQSD 167
Query: 172 GELWW------------------------------------RKFRAGELKYTRPYLIEIM 195
E WW R F GE Y RP I+
Sbjct: 168 NEHWWPWNGRAAYGWKEGMSNQRPDRNALFAMAEKGVPVQERIF--GEGHYLRPQFIQPY 225
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
+N+ I +T+ NSP W +HPV +VIVQ + I + PN DG NP+SCT+ I+DC
Sbjct: 226 RCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVIINS--HGPNNDGCNPESCTDVLIKDC 283
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+GDDC+A+KSG + G PT+ +I+ + I +GSE+SGG++++ A
Sbjct: 284 DFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCR-MKDGHGGITVGSEISGGVRNLFAS 342
Query: 316 D--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
+ + + + + +R+K RGG +++++ R + + + A D NY+ A
Sbjct: 343 NCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAHAVITI-------DFNYEEGA 395
Query: 374 ----LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
PV+++ + + A ++G+A P + ++N +
Sbjct: 396 KGSFTPVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTNCIFD 441
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 206/446 (46%), Gaps = 76/446 (17%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
E S S + ++ +FG + DG T NT+A AI ++ S+GG ++ +P G WLTG
Sbjct: 48 EVSQPSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVN---SKGGGKVIIPEGLWLTGP 104
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L+ K+A+++ S D +P+I+ + G DT+ R S I N ++ I
Sbjct: 105 VVLLSNVNLYAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAI 159
Query: 162 TGDNGTIDGQGELW------------WRKF----------------RAGELK-------- 185
TG +G DG G+ W W+ AG LK
Sbjct: 160 TG-SGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQ 218
Query: 186 -----------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+ RP ++ I+ S+ I + +T NSP W +HP+ S+ + +
Sbjct: 219 NNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDV 278
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ P S N D ++ +SC N + +C+ +GDD + +KSG D+ G G P + +II+
Sbjct: 279 KVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN 338
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
T + + +GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ + M
Sbjct: 339 NTVLHGHGGFV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM 397
Query: 349 -------KTMKWAFWITGSYGSH-PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
TM + + S + PD N PV +NI +++ A G+
Sbjct: 398 IDIPNDALTMDLYYAVNDSPETPIPDVN---EETPVFRNIYISNVLCRGAGRAVYFNGLP 454
Query: 401 GDPFTGICISNVTIELTNKPKKLQWN 426
P I I N+T+ TN K + N
Sbjct: 455 EMPLKNIFIKNMTV--TNAKKGIVIN 478
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 193/397 (48%), Gaps = 34/397 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V DG T NT +AA+ R G ++VP G++ T S + S TL+L K AV
Sbjct: 87 YGLVADGETDNTGRLQAALSTCPR-----GGTVYVPAGRYRTASLFMKSCTTLYLEKGAV 141
Query: 118 LLASQDEKEWPVIEP-LPSYGRGRDT-----EGG---RYSSLIFGTNLTDVVITGDNGTI 168
LL D +P++ +PS + EG ++ L+ T + DVV+TG+ GT+
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLNSFAGLLNITQVHDVVVTGE-GTL 200
Query: 169 D--GQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
D Q WW + + + RP + ++ S+NI + +T+ NS SW +HP++ + +
Sbjct: 201 DCDAQNGDWWIDPKVKRIAW-RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVKHLDLL 259
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
I P +PNTDGI+P+SC TRI I GDDC+A+K+ G+ + +I
Sbjct: 260 SFNINNPYNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVI 319
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVR 344
R + I +GSEMSGG++D+ ++ G+R+KT GRG + + R
Sbjct: 320 RN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 378
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPH-----ALPV------IQNINYRDMVAENVTMA 393
+ M+ +K F I Y PD + P+ ALPV + + D+VA + A
Sbjct: 379 NVEMRGVKAPFVINMFYFCDPD-GHSPYVQCREALPVDEYTPKLGTLTMEDIVATDAQFA 437
Query: 394 A-RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
+G+ P G+ + NVTI K+ Q D
Sbjct: 438 GCYFDGLPEQPIEGVSMKNVTITFDPDAKEGQAAMAD 474
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 194/432 (44%), Gaps = 79/432 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ +L +FG VGDGT T+AF AID LS+ +GG +L VP G W TG L S+ L
Sbjct: 48 NEVNLSDFGAVGDGTQLCTEAFARAIDALSQ---KGGGRLTVPAGVWFTGPIVLKSNINL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K AV+L S D +P++E + G DT R S I G NLT+V ITG G IDG
Sbjct: 105 HVEKGAVILFSPDIDLYPLVE---TVFEGLDTR--RCQSPISGRNLTNVAITG-QGAIDG 158
Query: 171 QGELW------------WRKF--RAGELK------------------------------- 185
G W W+ R G K
Sbjct: 159 NGHFWRPLKRQKVTESQWKAATSRGGVYKRADYWFPYPGTLKGDTISNMNVPQNLKTEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 219 WQSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G P + +I+ T +
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V++++VR ++M + + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFN 397
Query: 355 FWITGSYGSH------------PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGD 402
+ G P D P +NI+ + A GI
Sbjct: 398 LYYGGKSAVEVLESGEVVPAEVPAMPVD-ETTPCFRNIHIERLTCAGARRAMYFNGIPEM 456
Query: 403 PFTGICISNVTI 414
P GI + +V I
Sbjct: 457 PIDGITLKHVRI 468
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 34/392 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++ F GDG T +T A +AAI ++F+P G + T + L S+ TL L
Sbjct: 85 NVKHFNAKGDGITDDTLAIQAAI-----MSCPDDGRVFIPKGTYATKTIFLKSNLTLELE 139
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEG-----------GRYSSLIFGTNLTDVVIT 162
K A LL S + + LP Y + + E +++LI G N+++V +
Sbjct: 140 KGATLLYSASFESGAI---LPGYTKNSNHEEYYLGSWEGNPLDTFTALIQGVNVSNVNLI 196
Query: 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G+ G +DG G + W F RP L +I++S ++ + +TL NSPSW VHP++S
Sbjct: 197 GE-GVLDGNGSIGWWDFPKVRNVAWRPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDD 255
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
+ + I+ P SPNTDG++P+SC I + GDDC+A+KSG G ++
Sbjct: 256 LKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASE 315
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
+ IR + AV+ +GSEM+GG++ + E +++ G+RIKT GRG V+D
Sbjct: 316 YITIRNCSMNFGHGAVV-IGSEMAGGVKHILVEQCLFNETDRGLRIKTRRGRGEAAIVED 374
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV-IQNINYRDMVAENVT---- 391
V R + M+ + + Y PD + + LPV + + RD E++
Sbjct: 375 VTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTKETLPVDYRTPDIRDFCFEDIKCRHS 434
Query: 392 --MAARLEGIAGDPFTGICISNVTIELTNKPK 421
AA G+ P + + + T + +
Sbjct: 435 EIAAAYFYGLPEKPIERLSLKDCVFHFTTEAE 466
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 206/425 (48%), Gaps = 50/425 (11%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFLH 113
+ +FG VGDG T + F+ AI S GG ++ VP G ++ G S+ + L
Sbjct: 49 ITDFGAVGDGKTLCKEPFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K A+L S +E ++ LP+ R TE YS LI+ ++ ++ +TG+ GT++G G
Sbjct: 106 KGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNG 159
Query: 173 ---------------ELWWRKFRA---------GELKYTRPYLIEIMYSQNIQISNLTLI 208
E+ + R GE RP IE N++I +T+I
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRVFGEGYKLRPGFIEPFGCANVRIEGVTII 219
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP W +HP++ S+VIV+ +T+ + + N DG +P+SC N IE C +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCSNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G D G PT+ ++IR + S + V +GSE++GG++++ E+IT S + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNCSFRSKINGV-CIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALP--VIQNINYRDMV 386
K+ + RG +++DVYVR + T++ A + + P +I+N+ +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGERSAFHPTLFNSFLIENVTCKQSN 396
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKP------KKLQWNCTDITGISSGVTPK 440
+ MA G A P I + NVTI P + +++ I G P
Sbjct: 397 ECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKINGKKLDEKPT 452
Query: 441 PCELL 445
P EL+
Sbjct: 453 PKELV 457
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 190/372 (51%), Gaps = 45/372 (12%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
T A AID + + GG ++ +P G WLTG +L S+ L L + A L S+D++++
Sbjct: 84 TDAIHRAIDAAT---TAGGGKVLIPRGNWLTGPIHLKSNINLHLEEGASLYFSEDKEDYL 140
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW--W--------- 176
PV++ R E YSSLI+ N+ +V ITG G ++GQGE W W
Sbjct: 141 PVVKH-----RYEGVETYNYSSLIYAKNIENVAITG-KGILEGQGEHWLKWGTVQPRATA 194
Query: 177 --------RKFRAGELKY-TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
+ F G K RP + S+NI I +TL SP WN+H +YSS ++V+
Sbjct: 195 TKVPLSRRKNFGKGAGKEGMRPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRD 254
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
ITI + V S N DGI DS ++ +E ++ +GDD + +KSG+++ G+ +PT+ ++IR
Sbjct: 255 ITINS-VESHNGDGIVLDSSSDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIR 313
Query: 288 RLTC--ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
+ S + GSE SGGI+++ D + G+R KTA GRG +++ +
Sbjct: 314 NYYAYDVRTGSGGVVFGSETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISD 373
Query: 346 MTMKTMKW-AFWITGSY---GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG 401
+ MK +++ A +Y G P P+++NI R++ + V A L G+
Sbjct: 374 VQMKNIRYEAINFNTAYTGAGVGPS--------PLVRNIEIRNVKIDGVPNAIVLNGLPE 425
Query: 402 DPFTGICISNVT 413
I + N++
Sbjct: 426 KWIENIYMENIS 437
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 196/429 (45%), Gaps = 72/429 (16%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ +G DG T NT+A AI +R GG + +P G WLTG L S+
Sbjct: 266 RKDTFNIARYGSKADGITLNTQAINQAI---TRCSQAGGGTVLIPEGLWLTGPLVLRSNV 322
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L A+L S++ ++P++ + G+D R + I+G +L +V ITG +G I
Sbjct: 323 NLHLASGALLQFSRNRDDYPIVA---TTWEGQDAY--RCQAPIWGVDLVNVAITG-SGVI 376
Query: 169 DGQGELW------------WRKF----------------RAGELK--------------- 185
DG GE+W W K AG +K
Sbjct: 377 DGGGEVWRAVKKSKQTASQWAKLVASGGVLDDKKETWYPSAGSMKGAQSPDLARIANGKT 436
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP ++ + Q + + +T NSP+W +HP+ V ++G+T+ +
Sbjct: 437 PAELTEIRDFLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYA 496
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N DG++ +SC N +E+C +GDD + +KSG D+ G G+PT+ IIR
Sbjct: 497 QNGDGVDLESCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHG 556
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ + + ++ G+R KTA GRGG V+++YV ++M +
Sbjct: 557 GFV-IGSEMSGGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAI 615
Query: 357 ITGSYGSHPD---NNYDPHALPVIQNI-------NYRDMVAENVTMAARLEGIAGDPFTG 406
+ Y + D D + LP I+ +R NV+ GI
Sbjct: 616 LFDMYYAAKDPVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPE 675
Query: 407 ICISNVTIE 415
+ +SN+ IE
Sbjct: 676 MPVSNILIE 684
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 194/404 (48%), Gaps = 55/404 (13%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG G T +T AF+ AID +GG ++ VP G +LTG+ L S+ L + KDAV
Sbjct: 29 FGADSGGKTDSTAAFQQAIDEA---HQKGGGRVTVPKGVFLTGALRLKSNVELHVTKDAV 85
Query: 118 LLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE--L 174
+ SQ+ ++ LP+ R E YS LI+ ++ ITG G +DGQ +
Sbjct: 86 IRFSQNPADY-----LPAVLTRFEGVELYNYSPLIYAYEAENIAITG-GGMLDGQADDRH 139
Query: 175 WW-------------------------------RKFRAGELKYTRPYLIEIMYSQNIQIS 203
WW R+F G Y RP I+ +N+ I
Sbjct: 140 WWPWKRGTNGQPSQEKDRDALFEMAERNVPVEERRFGTGH--YLRPNFIQPYRCKNVFIQ 197
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
+T++NSP W +HPV +V V G+ ++ PNTDG++P+SC + I++C +GDDC
Sbjct: 198 GVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPESCKSMIIKNCLFDNGDDC 255
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAID 321
+A+KSG + G +P++ ++I V +GSE+SGG+++V AE + + +
Sbjct: 256 IAIKSGRNADGRRINVPSENIVIENNEMKDGHGGV-TIGSEISGGVKNVFAEGNLMDSPN 314
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHALPVIQNI 380
+ +RIKT RGG +K++Y +K++K I Y + PV++ I
Sbjct: 315 LDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEEGDAGEFK----PVVRGI 370
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
++ + R+ P TG+ ++N I N P +L+
Sbjct: 371 EVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEINDVNIPMELK 414
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 200/407 (49%), Gaps = 56/407 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++ +G GDG + +T AFK AI+ ++ GG ++ VPPG ++TG+ L S+ L +
Sbjct: 50 NIKRYGAAGDGKSDSTAAFKKAIEAANK---AGGGRVVVPPGIYVTGAIYLKSNVNLHVM 106
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K A + SQ+ ++ LP+ R E YS LI+ N ++ ITG+ GT+DGQG
Sbjct: 107 KKATIKFSQNPDKY-----LPAVLTRWEGVELYNYSPLIYAYNEKNIAITGE-GTLDGQG 160
Query: 173 --ELWW----RK------------------FRAGELK------------YTRPYLIEIMY 196
E WW +K F+ E K Y RP I+ +
Sbjct: 161 DNEHWWPWKGKKEFGWKEGEPNQQQDRDLLFKMAEEKVPVKERVFGKGHYLRPSFIQPYH 220
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
S+NI I +T++NSP W ++PV S ++++ + I+ PN DG++P+S N I+D Y
Sbjct: 221 SKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIG--HGPNNDGVDPESSKNVLIKDSY 278
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+GDDC+A+KSG + G +P++ +II V+ +GSE+SG +++V A+
Sbjct: 279 FDNGDDCIAIKSGRNADGRRINVPSENIIIEGNEMKDGHGGVV-IGSEISGSVRNVFAQH 337
Query: 317 ITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
+DS + +RIKT RGG ++D+ T+K++ Y D +
Sbjct: 338 -NVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQIDMYYEEGDTG---NF 393
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
PV++NIN ++ + + P T + I + + P
Sbjct: 394 TPVVRNINIENLQSNGGKYGLWIRAYERSPVTNLTIRHSNFQHVATP 440
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 168/338 (49%), Gaps = 62/338 (18%)
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
T NT A AI S GG ++ VP G WLTG + S+ LFL K A++ +++
Sbjct: 2 TKNTDAINKAIAACSE---NGGGKVIVPAGIWLTGPIEMKSNVNLFLEKGAMIQFTKNFD 58
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW---------- 175
++P++ L +Y TE R S I G NL ++ ITG G IDG G+ W
Sbjct: 59 DYPLV--LTTY---EGTEQYRCQSPISGWNLENIAITG-YGVIDGGGDAWRYVKKSKLTE 112
Query: 176 --WRKFRA-------------------------------GEL---------KYTRPYLIE 193
W+K + GEL Y RP ++
Sbjct: 113 SQWKKLVSSGGVVDKKNQWWPSEQAMNGQRILDSLLEANGELTKEDYRKVRDYLRPVMVN 172
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
++ +NI + +T NSP+WN+HP+ S ++I++ +T+ P S N DGI+ +SC N I
Sbjct: 173 LVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDVESCKNVVIY 232
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DC GDD + +KSG +++G G+PT+ +II +GSEMSGG+++++
Sbjct: 233 DCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHGG-FTIGSEMSGGVRNIK 291
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ I ++ G+R K+ GRGG V+++Y+ + MK +
Sbjct: 292 VTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDI 329
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 205/428 (47%), Gaps = 63/428 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++++G V DG T+N+KA K AI + GG ++ VP GK++TG +L S+ L
Sbjct: 52 NIKDYGAVNDGETNNSKAIKDAIKACN---DAGGGKVIVPKGKYVTGPIHLLSNVNFHLE 108
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A +L ++D+K + PV+ SY E YS LI+ ++ +TG GT +GQ
Sbjct: 109 EGAEILFTKDKKAYLPVVH--TSY---EGVELMNYSPLIYAYKQKNIAVTG-KGTFNGQA 162
Query: 173 --ELWW--------------------------RKFRA----------GELKYTRPYLIEI 194
+ WW RK GE RP E
Sbjct: 163 GKDNWWPWCGAERYGHIEGEPQQKDSVNLPRLRKMNEAGTPVAERVFGEGYQLRPTFFEP 222
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+NI + ++T N+P W +HP+ S ++ V G+T+ + PN DG +P+ N I++
Sbjct: 223 FECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYSKNVHIKN 280
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD--V 312
C +GDDC+A+KSG + G +P++ +++ V+ +GSE+S G+++ V
Sbjct: 281 CLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHGGVV-MGSEISAGVRNVYV 339
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW-ITGSYGSHPDNNYDP 371
R + + + + +RIKT RGGFV++V+V+ + + +K AF + YG + + D
Sbjct: 340 RNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYANQEGD- 398
Query: 372 HALPVIQNINYRDMVAENVTMAARL-EGIAGDPFTGICISNVTIELTNKP------KKLQ 424
+P I+NI+ D+ +N L G P I NV I P + +Q
Sbjct: 399 -YMPSIKNIHIEDVKVDNGGKYGILVRGREALPVKNITFKNVVINKAATPMLIEHSEPIQ 457
Query: 425 WNCTDITG 432
+ T I G
Sbjct: 458 FTNTSING 465
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 35/366 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG GDG +T +AAI S++ +P G + S L + L +
Sbjct: 84 VRDFGAKGDGIQDDTLFIQAAI-----MACPEKSRVLIPAGTYRIVSLFLKDDVNIELAE 138
Query: 115 DAVLLASQDEKEWPVIEPL-PSYGRGRDTEGG--------RYSSLIFGTNLTDVVITGDN 165
AVL A D +PV + + SY + G ++ +I G N+ VI G
Sbjct: 139 GAVLSAYTDRTRFPVFQGMIQSYDEQGEYNLGTWEGNPLPMFTGIINGVNVKGAVIYG-Q 197
Query: 166 GTIDG-----QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
GTIDG +G WW + + RP +I + + + + +T+ NSPSWN+HP +S
Sbjct: 198 GTIDGNAGDSEGN-WWHEPKVIHTA-CRPRMIFLERCRQVTVQGITVRNSPSWNIHPYFS 255
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
+ + +L P SPNTDG++P+SC + I Y GDDC+AVKSG G Y P
Sbjct: 256 DHLRFFDLKVLNPKDSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRP 315
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338
+K + IRR C+ + +GSEM+GG++++ +D + ++ G+RIKT GRG V
Sbjct: 316 SKDISIRR-CCMRDGHGSVTIGSEMAGGVKNLTVKDCMFLHTDRGLRIKTRRGRGKDAVV 374
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHAL------PVIQNINYRDMVAE 388
+ + M + F I Y PD + + AL P+I+++ ++D+ AE
Sbjct: 375 DGIVFEHIRMDHVMTPFVINCFYFCDPDGHSEYVRTKEALLVDERTPLIKSLCFKDIEAE 434
Query: 389 NVTMAA 394
N +AA
Sbjct: 435 NCHVAA 440
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 188/392 (47%), Gaps = 38/392 (9%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
++++ GDG ++T A AAI + + S + P G++L L S L+L +
Sbjct: 82 IKDYNAAGDGIRNDTAAIHAAI-----YSAPPRSVVIFPRGEYLVEHLFLKSGVDLYLEE 136
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDT---------EGGR---YSSLIFGTNLTDVVIT 162
AVL + + +++ Y + D EG + SLI+G ++ V I
Sbjct: 137 GAVLRQNPNRDALAIVK---GYQKSYDYTDAVINASWEGNPLDCFCSLIYGKDVQQVRIY 193
Query: 163 GDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
GD GT++G G WW + + Y RP + ++ +I + LT NS +WN+HP+YS
Sbjct: 194 GD-GTLNGSGMEGGWWNEPKKKNRAY-RPRNVSLVNCSDITVCGLTSQNSAAWNIHPLYS 251
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
S++ G+TI + SPNTDG+NP+SC N I C GDDC+A+KSG + P
Sbjct: 252 SNLAFYGLTIQSDPDSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRP 311
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338
++++ +RR V+ +GSE+S G+QDV ++ ++ G RIKT GRG V
Sbjct: 312 SRKITVRRCLMEEGHGGVV-IGSEISCGVQDVLVQNCLFRRTDRGFRIKTRRGRGSTSVV 370
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV------IQNINYRDMVAE 388
V + M+ + F I Y PD + D ALPV +QNI D+ A+
Sbjct: 371 DGVRFSHVKMEQVSHCFVINMFYHCDPDGHSDLVQCKEALPVGAETPAVQNITLSDICAD 430
Query: 389 NVT-MAARLEGIAGDPFTGICISNVTIELTNK 419
+ A L G+ P + + N +
Sbjct: 431 EIAGSAVFLYGLPESPIRNVTVKNSRFRFAQQ 462
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 207/425 (48%), Gaps = 50/425 (11%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFLH 113
+ +FG VGDG T +AF+ AI S GG ++ VP G ++ G S+ + L
Sbjct: 49 ITDFGAVGDGKTLCKEAFEKAITICS---DNGGGKITVPAGTYYMNGPLVFKSNVNVHLE 105
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K A+L S +E ++ LP+ R TE YS LI+ ++ ++ +TG+ GT++G G
Sbjct: 106 KGAILDFSTNESDY-----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGE-GTVNGNG 159
Query: 173 ---------------ELWWRKFRA---------GELKYTRPYLIEIMYSQNIQISNLTLI 208
E+ + R GE RP IE N++I +T++
Sbjct: 160 SKKFSPWNNIQTVEQEMLRKMGRTNVPVYRRIFGEGYKLRPGFIEPFGCANVRIEGVTIM 219
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP W +HP++ ++VIV+ +T+ + + N DG +P+SC N IE C +GDD +A+KS
Sbjct: 220 DSPFWVIHPIFCNNVIVRNVTVDS--HNYNNDGCDPESCRNVLIEGCTFSTGDDAIAIKS 277
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G D G PT+ ++IR + S + V +GSE++GG++++ E+IT S + +
Sbjct: 278 GRDNDAWRIGQPTENVVIRNCSFRSKINGV-CIGSEIAGGVRNIFIENITIPKSSNAIYF 336
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALP--VIQNINYRDMV 386
K+ + RG +++DVYVR + T++ A + + P +I+N+ +
Sbjct: 337 KSNLDRGAYIQDVYVRNVQADTVRTALIRFEPNYKGERSAFHPTLFDSFLIENVTCKQSN 396
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIELTNKP------KKLQWNCTDITGISSGVTPK 440
+ MA G A P I + NVTI P + +++ + G P
Sbjct: 397 ECGIYMA----GFAERPLQNIVLKNVTIGKVPTPYCFQNGENIRFQSVKVNGKKLDEKPT 452
Query: 441 PCELL 445
P EL+
Sbjct: 453 PKELV 457
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 192/401 (47%), Gaps = 53/401 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ S+ +FG NT A AI +S+ GG ++ +P G W+TG+ + S+ L
Sbjct: 24 YEVSIIDFGAQCGPDHVNTMAINQAIKAVSQ---HGGGKVIIPAGYWMTGAIEMQSNVNL 80
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG---RYSSLIFGTNLTDVVITGDNGT 167
+L +A + + + ++ +++ D EG R + I GT+L ++ ITG +G
Sbjct: 81 YLDYNAFVSFTTNISDYRLVDT--------DFEGSPSKRCIAPISGTHLQNIAITG-HGV 131
Query: 168 IDGQGELW------------WRKF--RAGELKYT-------------RPYLIEIMYSQNI 200
DG GE W W+ F R G + RP L+ +N+
Sbjct: 132 FDGSGERWRPVKRSKLTSAQWKNFTSRPGSVNKKGDVWEPDSNAANIRPVLLNFTSCKNV 191
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
++ +T NSP+W VHP+ +V + I + P + N D ++ +SC N I + +G
Sbjct: 192 KLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESCKNVVIINSLFDAG 251
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DD + +KSG ++ G G+P + + I+ T + + +GSEMSGG++++ D T I
Sbjct: 252 DDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFV-IGSEMSGGVKNIYISDCTFI 310
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMK-------TMKWAFWITGSYGSHPDNNYDPHA 373
++ G+R K+A GRGG V+++Y+ R+ MK TM + G D N
Sbjct: 311 GTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKPAERTDVN---EG 367
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
PV +NI ++++ E + L G+ P I I N+ +
Sbjct: 368 TPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRV 408
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 201/443 (45%), Gaps = 70/443 (15%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
E S S + ++ +FG + DG T NT+A AI +S S+GG ++ +P G WLTG
Sbjct: 48 EVSQPSFPDYEVNIRDFGALSDGVTLNTEAINNAIKAVS---SKGGGKVIIPEGLWLTGP 104
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L+ K+A+++ S D +P+I+ + G DT+ R S I N ++ I
Sbjct: 105 VVLLSNVNLYAEKNALIVFSSDTSLYPIID---TSFEGLDTK--RCQSPISAMNAENIAI 159
Query: 162 TGDNGTIDGQGELW------------WRKF----------------RAGELK-------- 185
TG NG DG G+ W W+ AG LK
Sbjct: 160 TG-NGVFDGAGDRWRPVKKDKMTERQWKNLVSSGGKVDENGKVWYPDAGALKASVLMTGQ 218
Query: 186 -----------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
+ RP ++ I+ S+ I + +T NSP W +HP+ S+ + +
Sbjct: 219 NNGQKEITDEEWTYMKSWLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDV 278
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ P S N D ++ +SC N + +C+ +GDD + +KSG D+ G G + +II+
Sbjct: 279 KVFNPWYSQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKN 338
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
T + + +GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ + M
Sbjct: 339 NTVLHGHGGFV-IGSEMSGGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINM 397
Query: 349 KTMKWAFWITGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ Y + D P PV +NI +++ A G+ P
Sbjct: 398 IDIPNDALTMDLYYAVNDFPETPIPDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMP 457
Query: 404 FTGICISNVTIELTNKPKKLQWN 426
I I N+T+ TN K + N
Sbjct: 458 LKNIFIKNMTV--TNAKKGIVIN 478
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 196/441 (44%), Gaps = 85/441 (19%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
++ +A + S+ FG GDG + NT++ AI +S+ +GG + +P G WLTG L
Sbjct: 40 VNIKADTTSIVSFGAKGDGVSMNTESINKAIAAVSQ---KGGGVVLIPGGLWLTGPIELK 96
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
S+ L L +DA+L + D ++ ++E G R S I GT+L ++ ITG +
Sbjct: 97 SNVNLHLKRDALLQFTDDFNQYKLVE-----GNWEGQPAWRNQSPISGTDLQNIAITG-S 150
Query: 166 GTIDGQGELW------------WRK---------------------FRAGELK------- 185
G IDG G W W+K F+ + K
Sbjct: 151 GIIDGNGGAWRMVKRDKLTESQWKKLTTSGGLVSEDGKMWYPSEKTFKGSKTKNAGVVAA 210
Query: 186 ------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ RP L+ + + I + +T NSP+WN+HP+ + ++ + + P
Sbjct: 211 GQSAADLQSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNP 270
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ N DG++ +SC N IE GDD + +KSG D+ G G PT+ +IIR
Sbjct: 271 WFAQNGDGVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYH 330
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ +GSEMSGG +++ D + I ++ G+R KT GRGG V+D+Y+ + M +
Sbjct: 331 AHGGFV-VGSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPG 389
Query: 354 AFWITGSYGSHPDNNYDP-------------------HALPVIQNINYRDMVAENVTMAA 394
+ Y + DP A P +NI +D+VA A
Sbjct: 390 EAILFDMYYAA----VDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAI 445
Query: 395 RLEGIAGDPFTGICISNVTIE 415
+ G+ I + NVTI+
Sbjct: 446 FVRGLPEMNIKDIYLENVTIQ 466
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 26/370 (7%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L +FG VGDGTT NT+AF A ++ GG +L VP G + TG F L S L L
Sbjct: 91 LTDFGAVGDGTTLNTEAFARA---IAAVAKAGGGKLVVPAGTFRTGPFALCSSLELHLEA 147
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR-YSSLIFGTNLTDVVITGDNGTIDGQGE 173
A++ A +W + EP + + LI G L DV ITG +G IDG G
Sbjct: 148 GALIQAPATFADWGLPEPTTFSSQAEVNAAVKPVPPLIHGRKLHDVAITG-SGQIDGNGA 206
Query: 174 LWW----RKFRA--GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
LWW R RA G L Y R ++I I + ++++++TL NS +++ P + + ++
Sbjct: 207 LWWAWSERAARAQRGRLVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDLTIER 266
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + AP +PNTD I+P S TN I C I +GDD + +KSG I
Sbjct: 267 VKVRAPEEAPNTDAIDPGSVTNAWIHHCDIDTGDDNIVIKSGGTNILIE----------- 315
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
C+ I++GSE + G++++ + +++G+RIK+ G GG V+++ +T
Sbjct: 316 --DCVIKHGHGISIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTGIT 373
Query: 348 MKTMKWAFWITGSY--GSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
MK ++ A + +Y + P+ DP +PVI++I + A ++ G+ P +
Sbjct: 374 MKDVENAIVLDLTYTDNNRPNFRGDPTKIPVIRDILIDHVTVTGSLKAGKIVGLPDSPIS 433
Query: 406 GICISNVTIE 415
G+ + +VTI+
Sbjct: 434 GVTLRDVTIQ 443
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 231/489 (47%), Gaps = 84/489 (17%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWF---EYSAISCR-----AHSASLEEFGGVGDGTTSN 68
+L+ ++I+ + + ++K+++++ + E+ + ++ ++++FG V G N
Sbjct: 11 ILLAVLITCCSENMAAQKSKSNETYQNIEFKMDKVKEPLIPKNTVNIKDFGAVNGGYVLN 70
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
TKAF AID +S+ +GG ++ +PPG WLTG L S+ L A++ S D+ +P
Sbjct: 71 TKAFADAIDAVSK---KGGGKVVIPPGIWLTGPIILKSNLELHAETGALIKFSTDKSLYP 127
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------------W 176
++E + G +T R S I+G NL ++ TG G DG GE+W W
Sbjct: 128 LVE---TSFEGLNT--WRCISPIYGKNLENIAFTG-KGVWDGSGEVWRQVKKSKLTESQW 181
Query: 177 RKFRAG------------------------------ELK----------YTRPYLIEIMY 196
+KF A +LK + RP L+ I
Sbjct: 182 KKFVASGGVLNEKKESWYPSETFMKASVGADQNVRLDLKTKEEFEAIHDFLRPVLVSIQN 241
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
S+ + NSP+WN+HP+ +IV+ +T+ P S N DG++ +SC N +E+
Sbjct: 242 SKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVESCKNVIVENSS 301
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
GDD + +KSG D+ G G+P + +I++ V +GSEMSGG++++ +
Sbjct: 302 FDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHGGV-TVGSEMSGGVKNLHVSN 360
Query: 317 ITAIDSESGVRIKTAVGRGG-----FVKDVYVRRMTMKTMKWAFWITGSYGSHP----DN 367
+ + ++ G+R K+ GRGG F+ D+Y+ + + + + + G + N
Sbjct: 361 CSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISFDLYYGGKSIAETLAEGGN 420
Query: 368 NYDPHALPVIQNI-NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ-- 424
+PV + ++++ +NVT+A + + + + N IE+TN K +
Sbjct: 421 TVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEMNLEN--IEITNLIAKAEKG 478
Query: 425 WNCTDITGI 433
++ D GI
Sbjct: 479 FSIIDANGI 487
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 195/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ +L+EF VG+G T T AF AI+ LS +GG L VP G WLTG L S+ L
Sbjct: 58 RTVNLKEFNAVGNGETLCTSAFADAINALS---EQGGGHLVVPAGVWLTGPIVLKSNIDL 114
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K AV+L S D +P++E + G DT R S I G NL +V ITG+ G IDG
Sbjct: 115 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 168
Query: 171 QGELW------------WRK--FRAGELK------------------------------- 185
G W W++ R G K
Sbjct: 169 NGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLKTEEE 228
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+V+ + + P + N
Sbjct: 229 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 288
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G P + +++ T +
Sbjct: 289 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV 348
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ ++M + + +
Sbjct: 349 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFN 407
Query: 355 FWITG-------SYGSHPDNNYDP----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G G DP P +NI+ +++V A GI P
Sbjct: 408 LYYGGKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMP 467
Query: 404 FTGICISNVTI 414
+ + +V I
Sbjct: 468 IENVVLEDVDI 478
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 200/425 (47%), Gaps = 42/425 (9%)
Query: 23 ISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRF 82
+ L +G E+ +D+ E+ I+ ++EFG GDG +T +AAI
Sbjct: 59 VCLKRDGAEAGTVFRTDY-EFVTIN-------VKEFGAKGDGLQDDTGFIQAAI-----L 105
Query: 83 QSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPL-PSYGRGRD 141
++ +P G + S L SH L L A+L A D ++P + + SY D
Sbjct: 106 ACPKNGRVLIPKGTYRITSLFLKSHIRLELGAGAILAADTDRFKYPRLPGMIESYDETED 165
Query: 142 TEGG--------RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKYT-RPY 190
G ++ +I G + +VVI G+ G IDGQ E WW+ AG ++ RP
Sbjct: 166 YNLGTWEGNPLPMFAGIINGIEVENVVIYGE-GLIDGQASFENWWKD--AGTMRGAFRPR 222
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
++ + ++I + L NSP+W +HP +S + + I P SPNTDG++P+SC +
Sbjct: 223 MVFLERCKDITLQGFYLKNSPAWVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESCKDV 282
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I + GDDC+AVKSG G Y P++ + IR+ + AV +GSE+ G++
Sbjct: 283 EITGLHFSLGDDCIAVKSGKIYMGRRYKTPSENIEIRQCLMENGHGAV-TVGSEVGAGVK 341
Query: 311 DVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN 368
VR D ++ G+R+KT GRG + D+ + + M + F + Y PD
Sbjct: 342 AVRVRDCLFRHTDRGLRVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPDGK 401
Query: 369 YD----PHALPV------IQNINYRDMVAENVTMAAR-LEGIAGDPFTGICISNVTIELT 417
+ ALP IQN+++ D+ A N AA L G+ I + NV I
Sbjct: 402 TEYVQCREALPADERTPEIQNLSFTDIKAANCHAAASFLCGLPEQKIRQIELRNVDISFA 461
Query: 418 NKPKK 422
+ ++
Sbjct: 462 EQARE 466
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 198/396 (50%), Gaps = 41/396 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG VGDG +T + +AAI G +++ P G +LT L S+ T+ L
Sbjct: 85 NVKDFGAVGDGKRLDTFSIQAAI-----MACPDGGRVYFPEGVYLTYPIFLKSNITIELG 139
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG-----------RYSSLIFGTNLTDVVIT 162
K AVLL ++ + +P+ LP ++ + G ++SLI G ++ +V I
Sbjct: 140 KGAVLLGAKGREMYPI---LPGEIDSQEFKNGYLGSWEGETNNMFASLITGISVENVNII 196
Query: 163 GDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
GD G IDG WW+ + + + RP + + +N+ I +T+ NSPSW +HP+ S
Sbjct: 197 GD-GIIDGNSSFDTWWQDAKVKRIAW-RPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMS 254
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
++ + I P +PNTDG++P+SC + I GDDC+A+KSG MP
Sbjct: 255 QNLKFVNLNIENPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMP 314
Query: 281 TKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GF 337
++ LIIR C+ + + +GSEMSGG+++V E+ ++ G+RIKT GRG G
Sbjct: 315 SENLIIR--NCLMEYGHGAVVIGSEMSGGVKNVHVENCIFRKTDRGIRIKTRRGRGKTGV 372
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMVA 387
+ +++ + M+ + F I Y D + LPV + NI +D+
Sbjct: 373 IDEIHASNIRMEGVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYVGNIYLKDITC 432
Query: 388 ENVTMAA-RLEGIAGDPFTGICISN--VTIELTNKP 420
+ +AA + G+ + + N V+ +L KP
Sbjct: 433 IDTQVAAGYMYGLPERKIERVDMENIYVSFDLNAKP 468
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 171/349 (48%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ EFG VGD T N +AF AI+ +S +GG ++ VP G WLTG + S+ L
Sbjct: 57 YAVSIVEFGAVGDAVTPNGEAFTRAIEQVSE---KGGGRVIVPRGIWLTGPIQMKSNINL 113
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L AV+ S + E+P+I+ + G DT R S I NL ++ ITG NG IDG
Sbjct: 114 HLEDGAVIRFSSNFDEYPLIK---TSFEGLDTY--RCISPIHAHNLENIAITG-NGVIDG 167
Query: 171 QGELW------------WRKF--------------------RAGELK------------- 185
G+ W W+K +AG+ +
Sbjct: 168 NGDAWRPVKKSKMTPSQWKKLVQSGGVLSDDGKIWYPSEKSKAGDGRDNFNVPDFDNRDA 227
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ I + I + T NSP+WN+HP+ S V ++ +TI P S N
Sbjct: 228 FEEVKDFLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNG 287
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + KSG ++ G G+PT+ +I++ +
Sbjct: 288 DGLDLESCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGFV 347
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSG +++V D T + ++ G+R K+ GRGG V+++Y+ + M
Sbjct: 348 -VGSEMSGDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDM 395
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 62/350 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FGGVGDGTT N++AF AI+ L + +GG L +P G W TG L S+ +
Sbjct: 53 YKVTITQFGGVGDGTTLNSEAFAKAIEALEK---KGGGTLVIPQGIWYTGPIVLKSNIHI 109
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+L A++L S D +P++ + G DT R S I ++ ITG GTIDG
Sbjct: 110 YLQGGAIILFSDDFDLYPIVH---TSFEGLDTR--RCQSPISAKGAVNIAITG-KGTIDG 163
Query: 171 QGELW------------WRKF--RAGELK------------------------------- 185
G+ W W+ + G L
Sbjct: 164 NGDAWRPVKKSKLTASQWKALLQKGGVLNDKKDIWYPSAKSKLGNERSDMNVPRGLKTDE 223
Query: 186 -------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+ RP L+ + N+ + +T NSPSWN+HP+ +V ++ +T+ P S N
Sbjct: 224 EWEEVKDFLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQN 283
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ +SC NT + +C GDD + +KSG D G G+P + +I+
Sbjct: 284 GDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGF 343
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +GSEMSGG++++ + + ++ G+R K+ GRGG V++++++ + M
Sbjct: 344 V-VGSEMSGGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDM 392
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 193/405 (47%), Gaps = 39/405 (9%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
+EY ++ R EFG GDG +T A + AI + S++ VP G +
Sbjct: 77 YEYVTLNVR-------EFGAYGDGEHDDTNAIQCAI-----MAAPKDSRVLVPEGVYKIS 124
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGG---RYSSLI 151
S L + L L K AVL A + +++P++ +D EG +S+++
Sbjct: 125 SIFLKDNLNLELAKGAVLSAFTEREKFPILPGQIETYDEKDYYNLGTWEGNPLDMFSAIV 184
Query: 152 FGTNLTDVVITGDNGTIDG--QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
G N ++V ITG+ GTIDG + WW+ + + RP L I N+ + +T+ N
Sbjct: 185 CGINCSNVTITGE-GTIDGCTTHDNWWKNCKIRNTAW-RPRLFFINNCSNVTMHGITVQN 242
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SPSW +HP +S + + IL P S NTDG++P+SC + + YI GDDC+A+KSG
Sbjct: 243 SPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSG 302
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
PT+ + +R+ C+ + +GSE++ G++DV D ++++ G+R+K
Sbjct: 303 KIYMAQKEKTPTEDMTVRQ-CCMRDGHGAVTVGSEIAAGVKDVHIRDCMFMNTDRGLRVK 361
Query: 330 TAVGRGGF--VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV------I 377
T GRG + D+ + M + F + Y PD + LPV I
Sbjct: 362 TRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPDGKTEYVGSRKPLPVDDRTPSI 421
Query: 378 QNINYRDMVAENVTMA-ARLEGIAGDPFTGICISNVTIELTNKPK 421
+++ ++D+ A+N +A A + G+ + N+ K
Sbjct: 422 KSLTFKDINAKNCHVAGAYIFGLPESKVEKLTFENINFSYAKDAK 466
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 185/374 (49%), Gaps = 36/374 (9%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + ++ +G GDG T +T A + AID + +GG+ + K++T L S
Sbjct: 23 AKTCNVRAYGARGDGATKDTVAIQKAIDACA---GKGGTVVIGGSSKFITAPLTLKSKMI 79
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
+ L AS D ++P E +GR +++ D+ ITG G ID
Sbjct: 80 FRVEAGTTLEASTDHNDFPEKEEFKDHGR---------QAMLTAKAAEDITITG-GGVID 129
Query: 170 GQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
G+GE WW + RP LI + ++I++ N+T NS W + P YS ++ + +
Sbjct: 130 GRGESWWP-----QPNLPRPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMK 184
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
+LAP TS NTDGI+P + T I+ YI +GDD VA+KSG G P L R +
Sbjct: 185 VLAPQTSHNTDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDI 238
Query: 290 T---CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
T C +++GSE++GG+Q+VRAE I ++ G+R+K+ RG + + R +
Sbjct: 239 TITDCEFLHGHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDI 298
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQ-NINYRDMVAENVTM-----AARLEGIA 400
TM+ +K A ++ Y PD + PV + ++ D+ ENV AA + G+
Sbjct: 299 TMENVKTAILLSEFYPKIPDTITEE---PVTRLTPHFHDITIENVQAVGSRDAAVIVGLP 355
Query: 401 GDPFTGICISNVTI 414
P + ++NV I
Sbjct: 356 ESPIRNLKLTNVHI 369
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 213/447 (47%), Gaps = 64/447 (14%)
Query: 16 ILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAH-------SASLEEFGGVGDGTTSN 68
IL++ ++IS + + S K NS+W + + I + ++ ++G + DG N
Sbjct: 14 ILIMLLLISCASK-LSSEKKSNSNWDQLNTIFKDVQPPVFPNKTFNVMDYGAISDGVFDN 72
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T F I S +GG + +P G + TG +L ++ L L + A ++ S + K++P
Sbjct: 73 TVVFNKTIKTCSE---KGGGMVLIPKGTYFTGPIHLDNNVNLHLSEGAEIVFSTNPKDYP 129
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW---------- 176
++ + TE YS LI+ N T+V ITG G ++G+ + WW
Sbjct: 130 LV-----HTSFEGTELMNYSPLIYAYNKTNVAITGK-GILNGKASNDNWWPWCGKSVYGW 183
Query: 177 ------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPS 212
R F G+ Y RP IE +N+ + + ++N+P
Sbjct: 184 KKGDPIQNVKQLMESAEKGMAVKDRVF--GDGNYLRPNFIEFFECKNVHLKDFKIVNAPF 241
Query: 213 WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
W +HP+ S+ VIV GI I + PN DG +P+ N I +C +GDDC+A+K+G D
Sbjct: 242 WIIHPIKSNHVIVDGIHIES--HGPNNDGCDPEYSKNVIIRNCTFDTGDDCIAIKAGRDS 299
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKT 330
G + ++ ++I+ V +GSE+S G+ +V E+ + + + + +RIK+
Sbjct: 300 DGRRVAIKSENILIQNCKMFDGHGGV-TIGSEISAGVSNVFVENCIMDSPELDRAIRIKS 358
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
RGG ++++YVR +T+ +K + I YG H N +P+++NI + +N
Sbjct: 359 NTRRGGIIENIYVRNITVGEVKESVLGIDLHYGVH--GNQTGTFMPIVRNIFIENSTIKN 416
Query: 390 VTMAARL-EGIAGDPFTGICISNVTIE 415
+ L +G G P + I VTIE
Sbjct: 417 GGLYGILAKGHPGFPISNIRFKEVTIE 443
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 176/341 (51%), Gaps = 53/341 (15%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+EE+G G +T A AAI + GG ++ VP G +LTG+ +L S+ L L
Sbjct: 60 SIEEYGAEAGGEVLSTDAIAAAIKACN---EAGGGRVVVPKGVYLTGAVHLLSNVNLHLE 116
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A L S++ K++ P++ R E YS I+ ++ ITG NGT+DG
Sbjct: 117 EGATLRFSRNPKDYLPLVR-----SRWEGMELMNYSPFIYAYQQENIAITG-NGTLDGHA 170
Query: 173 EL--WW--------------------RKFRA--------------GELKYTRPYLIEIMY 196
++ WW RK GE + RP ++
Sbjct: 171 DMEHWWPWCGAKHFGWKEGMGRQNPSRKLLHEMVHDRVPLEERIFGEGHFMRPQFVQPFE 230
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
+N+ I ++ LIN+P WN+HPV +V V+ + I PN DG +P++C N I+DCY
Sbjct: 231 CKNVLIQDVKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPEACKNVLIKDCY 288
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+GDDC+A+KSG ++ G G+P++ +II V+ +GSE+SGG ++V A++
Sbjct: 289 FDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHGGVV-IGSEISGGARNVFAQN 347
Query: 317 ITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +DS + +RIKT+ RGG V+++Y+R + + T + A
Sbjct: 348 LV-MDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREA 387
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 196/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG VG+G T+AF AID L+ +GG L VP G W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTEAFAKAIDALA---EKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K A++L S + +P++E + G DT R S + G NL +V ITG+ G IDG
Sbjct: 105 HLEKGAIILFSPNVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 171 QGELW------------WRK--FRAGELK------------------------------- 185
G W W++ R G K
Sbjct: 159 NGHYWRPLKREKVTESVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKSEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC NT I + GDD + +KSG D+ G G + +++ T +
Sbjct: 279 DGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V+++++R ++M + + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFN 397
Query: 355 FWITG-------SYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G G +P + P +NI+ ++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEMP 457
Query: 404 FTGICISNVTI 414
GI + NV I
Sbjct: 458 IDGITLKNVDI 468
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 194/390 (49%), Gaps = 39/390 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG VGDG T +T A +AAI + GS++ +P G + L SH TL L
Sbjct: 81 NVKDFGAVGDGVTMDTAAIQAAIMAAPK-----GSRVVIPAGTYKILPLFLKSHMTLELL 135
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT--------EGGR---YSSLIFGTNLTDVVIT 162
+ A LLA D K++P+ LP D EG Y+S+I G + DV I
Sbjct: 136 EGATLLAHTDRKDYPI---LPGKMILEDGSIAYLASWEGDMADCYASIITGIGVRDVRII 192
Query: 163 GDNGTIDGQGE--LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
G GTIDG G+ WW + + RP + ++ +++ + +T+ NSPSW VHPV S
Sbjct: 193 G-QGTIDGNGQNADWWVDCKVKRGAW-RPRSLYLVDCEDVVVEGITIKNSPSWTVHPVRS 250
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
+ + +T+ P SPNTDGI+P+SC I GDDC+A+KSG + P
Sbjct: 251 TKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSLGDDCIAIKSGKISVPVDMRRP 310
Query: 281 TKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GF 337
++ +IIR C+ + + LGSEMSGGI+ V E +++ G+RIKT GRG
Sbjct: 311 SENIIIR--NCLMEYGHGGVVLGSEMSGGIKHVYVERCFFRNTDRGLRIKTRRGRGNTAV 368
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMVA 387
+ ++Y++ + M + F + Y PD + LPV I +N+ ++
Sbjct: 369 IDEIYIKNIKMDGVLTPFTLNCFYFCDPDGKTEYVWSKDKLPVDERTPYIGTLNFENIYC 428
Query: 388 ENVTM-AARLEGIAGDPFTGICISNVTIEL 416
EN + A + G+ + NV IE
Sbjct: 429 ENSEVCAGFIYGLPEQTIKELNFKNVFIEF 458
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 192/427 (44%), Gaps = 70/427 (16%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ FG DG + NT+A AI S+ +GG + VP G WLTG L S+
Sbjct: 42 RRDTTNIIAFGAKPDGVSLNTQAINKAISTCSQ---KGGGVVLVPAGIWLTGPIVLKSNV 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L K A LL + D+ ++ ++E + R R S + GTNL +V ITG G +
Sbjct: 99 NLHLKKAATLLFTTDKNQYALVEGVYEGKRA-----ARNQSPVSGTNLANVAITGQ-GIL 152
Query: 169 DGQGELW------------WRKF--RAGELK----------------------------- 185
DG G++W W++ G LK
Sbjct: 153 DGNGDVWRAVHKSQLTESQWKEKVESGGVLKDDGKTWYPSEQFKKASTENRSMLLAPGKT 212
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + + +T NSP+W +HP+ + ++ +T P +
Sbjct: 213 PQDFADMKDFLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYA 272
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N DG++ +SC N IE C + GDD + +KSG D+ G GMPT+ IIR T +
Sbjct: 273 HNGDGMDIESCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHG 332
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK---- 352
+ +GSEMSGG + + + T + ++ G+R K+ GRGG V+ +Y + + MK +
Sbjct: 333 GFV-VGSEMSGGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAI 391
Query: 353 ----WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ F + G + PV +N+ + ++V + G+ I
Sbjct: 392 FFDMYYFVKFATDGERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIA 451
Query: 409 ISNVTIE 415
++N+ +E
Sbjct: 452 MANMVLE 458
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 187/414 (45%), Gaps = 65/414 (15%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + FG DG T T A + AID +R GG ++ G +LTG+ +L S+
Sbjct: 48 AKQFEITRFGARADGKTDCTDAIRKAIDEAARV---GGGRVMAREGAFLTGAIHLKSNVN 104
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L + K A L S D K +P++ R E YS I+ N ++ ITG GT+D
Sbjct: 105 LVVEKGATLRFSPDPKLYPIV-----LTRFEGLECMNYSPFIYAFNQQNIAITG-GGTLD 158
Query: 170 GQ--GELWW---------------RKFRA-----------------GELKYTRPYLIEIM 195
GQ GE WW RK RA G+ + RP I+
Sbjct: 159 GQASGEHWWPWAGKRGARPDDPNQRKARAALVEMAEKGVPVADRKFGDGAWLRPMFIQPY 218
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
N+QI ++T+ NSP + +HPV +VI + + + + PN DG +P+S + I+ C
Sbjct: 219 RCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGC 276
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+GDDC+A+KSG + G P++ LI++ V +GSE SGGI++V A+
Sbjct: 277 TFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHGGV-TMGSECSGGIRNVFAQ 335
Query: 316 DITAIDSES---GVRIKTAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGSHPD 366
D +DS + +R K RGG ++ VY+R + + A ++ G GS
Sbjct: 336 DCQ-MDSPNLNVALRFKNNAVRGGVIEHVYMRNVKAGQVAQAAIDVDFYYEEGEKGSF-- 392
Query: 367 NNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
PV++++ ++ + T L G P I I N T KP
Sbjct: 393 -------TPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTFAGATKP 439
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 192/428 (44%), Gaps = 78/428 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
H+ ++ ++G VG+G NT+ F AI+ ++ GG + +PPG W TG L S L
Sbjct: 19 HTVTISDYGAVGNGVYDNTRVFHQAIEACAK---AGGGTVVIPPGIWRTGPIKLQSRIEL 75
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
A+++ S+ +++P++ + +Y GR R S + G L DV ITG +G DG
Sbjct: 76 HASAGALVVFSKFFEDYPLL--MSTY-EGRQMF--RCQSPLDGEGLEDVAITG-SGIFDG 129
Query: 171 QGELWWRKFRAGEL---------------------------------------------- 184
GE W R + G+L
Sbjct: 130 SGEAW-RPVKQGKLTESQWERLIQSGGVVDDQGLWWPTPAARDGQETLDRIEQTGSEEPQ 188
Query: 185 ------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
Y RP L+ + + I +S T NS +W +HP S + +Q IT+ P + N
Sbjct: 189 DYVPVRDYLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ DSC +E+ GDD + +KSG ++ G G P++++ IR T +
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGGI 308
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-----TMKW 353
+ +GSEMSGGI+DV D T I ++ G+R K+ GRGG V+++ + R+ M+ + +
Sbjct: 309 V-VGSEMSGGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRDIDGDAISF 367
Query: 354 AFWITGSYGSHPDNNYDPHAL-------PVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
+ G GS Y + PV +NI +D+V A + G+ P
Sbjct: 368 NLYYEGKAGS---GEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVEN 424
Query: 407 ICISNVTI 414
+ + I
Sbjct: 425 LTVKRSAI 432
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 189/407 (46%), Gaps = 66/407 (16%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + ++ +G DG + NT A AI S+ +GG + VP G WLTG L ++
Sbjct: 42 KKDTFNITNYGAKPDGISLNTDAINKAISDCSK---KGGGVVLVPNGYWLTGPIKLQNNV 98
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L K+A+L S++ ++ ++E G R S I G N+++V ITG G I
Sbjct: 99 NLHLKKNALLQFSKNFDDYKLVE-----GVYEGKPSARNESPIMGVNVSNVAITGQ-GII 152
Query: 169 DGQGELW------------WR-KFRAGE-------------------------------- 183
DG G+ W W+ K GE
Sbjct: 153 DGNGDAWRMVRTSDLTEYEWKAKIAKGEGILSEDKKRWYPSEKNKRGHDQNISFWLGPGV 212
Query: 184 --------LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT 235
+ RP LI + +N+ + +T NSP+WNVHP+ ++ ++G+ I P
Sbjct: 213 KLSDFEPVKDFLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDY 272
Query: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295
+ N DG + +SC N +E C GDD + +KSG D+ G G+ T+ +IIR T
Sbjct: 273 AHNGDGADIESCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKGH 332
Query: 296 SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM--KW 353
+ +GSEMSGG +++ D T + ++ G+R KT+ GRGG V++++++ + M + +
Sbjct: 333 GGFV-VGSEMSGGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINMFDIDQEA 391
Query: 354 AFWITGSYGSHPDNNYDPHALPVIQNIN-YRDMVAENVTMAARLEGI 399
F+ + P N PV + +R++ EN+T +GI
Sbjct: 392 IFFDMYYWVKSPKANEAVEIPPVTEETPIFRNVYIENITCNGAKKGI 438
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 185/399 (46%), Gaps = 42/399 (10%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ S+++FG VGDG +T + + A++ L G +L P G +LTG NL SH T+
Sbjct: 76 AVSVKDFGAVGDGVADDTLSIQTAVNCLP-----AGGRLRFPEGTYLTGPINLKSHITIE 130
Query: 112 LHKDAVLLASQDEKEWP----VIEPLPS-----YGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+ A LL + D +P VI L + +G + +L+F D+ I
Sbjct: 131 FTEKATLLGTTDMARYPKIPGVITDLVTGEEVHFGTWEGNAVPMHQALLFAEYAEDIKIV 190
Query: 163 GDNGTIDG--QGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
G GT+DG Q WW + E+ RP LI + + + +T N+ SW +HP +S
Sbjct: 191 G-RGTVDGNAQNSQWWVDVKNQEVP--RPRLIFFNRCKLVTVHGITAQNAASWQLHPYFS 247
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
+ + +++ AP SPNTD ++P++C I C GDDC+A+KSG + G + P
Sbjct: 248 TELQFLDLSVNAPKDSPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQP 307
Query: 281 TKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ IR CI F I LGSEM+GG++++ +++ G+RIKT GRG K
Sbjct: 308 ANRHTIR--NCIMQFGHGAITLGSEMAGGVKNLSVSRCIFKETDRGLRIKTRRGRG---K 362
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP----------HALPV------IQNINYR 383
D + + K +K +T + N DP LPV + +R
Sbjct: 363 DAVIDGIEFKNIKMDGVLTPIVMNMWYNCCDPDRYSEYNTTREKLPVDDRTPYLGKFTFR 422
Query: 384 DMVAENVTMAA-RLEGIAGDPFTGICISNVTIELTNKPK 421
DM N +AA +G+ P I + N+ K
Sbjct: 423 DMECLNCHVAACYCDGLPEMPIDEITVDNIKFTYAENAK 461
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 217/489 (44%), Gaps = 80/489 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
H ++ +G VG+G NT AF AID +++ GG ++ VP G WLTG L S+ L
Sbjct: 53 HEVNITAYGAVGNGIEKNTAAFAKAIDEVAQ---AGGGRVIVPRGIWLTGPVTLQSNINL 109
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L + A++L S+D ++P+++ + G +T R +S I ++ ITG G IDG
Sbjct: 110 HLEEGALVLFSRDFDDYPLVK---TSFEGLNTV--RCTSPINAFEAENIAITG-KGVIDG 163
Query: 171 QGELW------------WRK------------------------------FRAGEL---- 184
G+ W W K F +L
Sbjct: 164 NGDAWRPVKKGKMTPGQWDKLVKSGGVLSDDEKMWFPTANSKKGYTSSSNFNVPDLISDD 223
Query: 185 ------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+ RP ++ ++ + + T NSP+WN+HP+ S +V+++ + + P S N
Sbjct: 224 ELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQN 283
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ +SC N + + GDD + KSG +Q G GMPT+ +I++ T
Sbjct: 284 GDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGGF 343
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWI 357
+ +GSEMSGG+++V + T I ++ G+R K+ GRGG V+++++ + M + A
Sbjct: 344 V-VGSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIRF 402
Query: 358 TGSYGSH----------PDNNYDPHALPVIQNI-NYRDMVAENVTM-----AARLEGIAG 401
YG + D D +PV + ++D+ +N+T AA G+
Sbjct: 403 NMFYGGNSPVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPE 462
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDN 461
+ + N +E N + + + + + + Q TE +F DN
Sbjct: 463 KSLENVRLENALLEAKNGITVIDTDGLVLKNVEVRAAKTSALTIYNSRNVQVTEFSFGDN 522
Query: 462 -RLPVENMG 469
+ PV +G
Sbjct: 523 GKTPVRVLG 531
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 39/415 (9%)
Query: 36 RNSDWFEYSAISCRAHSAS----LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLF 91
+N D E S + R + +++FG VGDG +T + ++AI G +++
Sbjct: 63 KNEDTGEKSTVFQRTKPETAYINVKDFGAVGDGKRIDTFSIQSAI-----MACPDGGRVY 117
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI-------EPLPSY-GRGRDTE 143
P G +LT L S+ T+ L K AVLL +++ + +P++ E SY G
Sbjct: 118 FPEGVYLTYPIFLKSNITIELGKGAVLLGAKEREMYPILPGEIDSQEFSNSYLGSWEGEA 177
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQ 201
++SLI G ++ +V I GD G IDG WW + + + RP + + +N+
Sbjct: 178 NDMFASLITGISVENVNIIGD-GVIDGNSSFDTWWYDAKVKRIAW-RPRTVYLNKCKNVL 235
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
I +T+ NSPSW +HP+ S ++ + I P +PNTDG++P+SC + I GD
Sbjct: 236 IEGITIRNSPSWTIHPLMSQNLKFINLNIENPKDAPNTDGLDPESCKDVLIAGTRFSVGD 295
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAI 320
DC+A+KSG MP++ L IR C+ + + +GSEMSGG+++V E+
Sbjct: 296 DCIAIKSGKLSVSQKLPMPSENLYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVENCVFK 353
Query: 321 DSESGVRIKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHAL 374
++ G+RIKT GRG G + +++ + M+ + F I Y D + L
Sbjct: 354 KTDRGIRIKTRRGRGKTGIIDEIHAANIKMEGVLTPFTINSFYFCDADGKTEYVWSKEKL 413
Query: 375 PV------IQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISN--VTIELTNKP 420
PV + NI +++ + +AA + G+ + + N V+ +L KP
Sbjct: 414 PVDDRTPYVGNIYLKNITCIDAHVAAGYMYGLPERKIERVDMENIYVSFDLNAKP 468
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 221/481 (45%), Gaps = 81/481 (16%)
Query: 6 TAKRTQVICIILLVGIIISLNTNGVESRKARNS--DWFEYSAISCRAHSASLEEFGGVGD 63
T K +ICI+L I +S V S N + + +S + S+E++G V
Sbjct: 10 TFKMHILICILLSFTIGMSQEIEPVPSSIYENVAIEMSKVPLVSFPKLTVSIEKYGAVAG 69
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G NT+A + AI +S+ +GG + +P G WLTG L S+ L L A+LL S++
Sbjct: 70 GLEKNTQAIEKAISEVSK---KGGGTVKIPRGIWLTGPITLKSNINLHLEDGALLLFSKN 126
Query: 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE---------- 173
+++P+ + + G +T R S I N+ ++ ITG G IDG G+
Sbjct: 127 FEDYPLTD---TSFEGLNTM--RCISPINAMNVENIAITGK-GVIDGNGDAWRPVKKGKM 180
Query: 174 --------------------LWW------RKFRAGEL----------------KYTRPYL 191
+W+ + F + E + RP +
Sbjct: 181 TSKQWDNLVASGGVLSEDGKIWFPTKSSKKGFDSREYFNVPNLTKKEDLESVKDFLRPVM 240
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
+ I+ + + T NSP+WN+HP+ S +VI++ + + P S N DG++ +SC N
Sbjct: 241 VSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLESCKNVL 300
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
I + GDD + +KSG D+ G G+PT+ +I++ T + +GSEMSGG+++
Sbjct: 301 IYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFV-IGSEMSGGVKN 359
Query: 312 VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWAFWITGSY----- 361
+ + I ++ G+R K+ GRGG V+++Y+ + M + +++ + +G+
Sbjct: 360 INVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFNMFYSGNAPILEE 419
Query: 362 -GSHPDNNYDPHAL------PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
+ D D + PV +NI ++++A N AA G+ + + N +
Sbjct: 420 NQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEKSLENVTLENAML 479
Query: 415 E 415
E
Sbjct: 480 E 480
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 196/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ +L++FG VG+G T+AF +AI+ LS +GG L VP G W TG L S+ L
Sbjct: 48 RTVNLKDFGAVGNGKDLCTEAFASAINTLS---GQGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K AV+L S D +P++E + G DT R S I G NL +V ITG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 158
Query: 171 QGELW------------WRKF--RAGELK------------------------------- 185
G W W++ R G K
Sbjct: 159 NGHFWRPLKREKVTESVWKQTVSRGGVYKRPTYWFPYPETLKGDTISNMNVPRHLITEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+V+ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G + +++ T +
Sbjct: 279 DGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V++++V ++M + + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFN 397
Query: 355 FWITG-------SYGSHPDNNYDP----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G G +P P +NI+ R++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFFNGIPEMP 457
Query: 404 FTGICISNVTI 414
GI + ++ I
Sbjct: 458 IDGIVLEDIDI 468
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 186/403 (46%), Gaps = 54/403 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH-FTLFL 112
+L+ FG VG+G + ++AF A+ LS G L + G +LTG ++ + L L
Sbjct: 5 TLKSFGAVGNGQQNESEAFAKALAALSD-----GGVLHIEEGTYLTGPLHIQAKGLVLEL 59
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ AV+ DE + P Y R + N +++ G+ G IDG G
Sbjct: 60 DRGAVIQFIADENLYT-----PVYSRWEGVNCYCMHPCLLIENSDGLIVRGE-GIIDGNG 113
Query: 173 ELWW------RKFRAGELK--------------------------YTRPYLIEIMYSQNI 200
+ WW R + G + + RP L++I+ S N+
Sbjct: 114 QWWWDTAHKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNV 173
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
++ LTL NSP W +HP+YS+++I + +L P +PNTDGI+ DSC I+ C + G
Sbjct: 174 KLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVG 233
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DD +A+KSG G+A PT ++I T S + +GSE + GI+DVR D
Sbjct: 234 DDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAV-IGSETAAGIRDVRVHDCLFD 292
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY--GSHPDNNYDPHAL---- 374
++ G+RIKT GRGG + +++ + MK + Y GS ++ L
Sbjct: 293 GTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITD 352
Query: 375 --PVIQNINYRDMVAENVT-MAARLEGIAGDPFTGICISNVTI 414
P I+ + D +E+ T AA + G+ P + I N T
Sbjct: 353 TTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTF 395
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 193/431 (44%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG VG+G T AF AID L+ +GG L VP G W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAIDALA---EKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K AV+L S D +P++E + G DT R S + G NL +V ITG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 171 QGELW------------WRK--FRAGELK------------------------------- 185
G W W++ R G K
Sbjct: 159 NGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G G + +++ T +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V+++++R + M + + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFN 397
Query: 355 FWITG-------SYGSHPDNNYDP----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G G +P P +NI+ +++V A GI P
Sbjct: 398 LYYGGKSAVEVLESGEKVLAKVEPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMP 457
Query: 404 FTGICISNVTI 414
GI + ++ I
Sbjct: 458 IDGIVLEDIDI 468
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 200/459 (43%), Gaps = 71/459 (15%)
Query: 2 GSLKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASL------ 55
GSL T ++ V L + L +G S +S W I R + S+
Sbjct: 8 GSLFTRRQVNV----GLASALAVLGASGCSSLTPTHS-WLSADDIVARTQAPSIPSDRFV 62
Query: 56 -EEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
E FG V DG + A + AI+H +S+GG + G +LTG +L S L L K
Sbjct: 63 VENFGAVSDGVFDCSDAIQKAIEHA---ESQGGGTVVFTQGVYLTGPIHLRSKIALHLEK 119
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG--Q 171
DA L D + LP+ + R E +S LI+ L DV ITG GT+DG
Sbjct: 120 DATLKFVTDPNRY-----LPAVFTRWEGMELMGFSPLIYAYGLNDVAITG-QGTLDGGAN 173
Query: 172 GELWW------------------------------------RKFRAGELKYTRPYLIEIM 195
+ WW R+ + + RP ++
Sbjct: 174 DQTWWPWKGPHKEAHWDLIEGQDQKPARDYLFAMAERGVPPRERVFADGGFLRPPFLQFY 233
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
Q I + + + N+P W +HPV S V ++G+ + PN+DG +P+SC IEDC
Sbjct: 234 DCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQS--YGPNSDGCDPESCERVVIEDC 291
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+GDDC+A+KSG + G G+P K ++++ V+ +GSE+SGG+ +V
Sbjct: 292 VFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHGGVV-IGSEISGGVANVHVR 350
Query: 316 DITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
T +DS E +RIKT RGG ++ + ++T+ ++K F I Y +
Sbjct: 351 HCT-MDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVFVINFYYEEGDRGKW--- 406
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
+P++++I D+ L G P T + + N
Sbjct: 407 -MPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLRN 444
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 195/403 (48%), Gaps = 34/403 (8%)
Query: 45 AISCRAHSA--SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
+I + SA ++ +FG VGDG NT +AAI F ++ +P G +LTG
Sbjct: 74 SIKTKLESAVVNILDFGAVGDGNHVNTAFIQAAIQVCPAF-----GRVIIPKGTYLTGPL 128
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-------YGRGRDTEGGRYSSLIFGTN 155
L S+ TL L + +VLL ++ + +P+++ S G E ++SLI N
Sbjct: 129 FLKSNITLELEEGSVLLGLKEREHYPILKANISMTNRDFYLGSWEGNEADCFASLITAIN 188
Query: 156 LTDVVITGDNGTIDGQGEL--WWRKFRAGELKYT-RPYLIEIMYSQNIQISNLTLINSPS 212
+ +V I G GTIDG + WW F+A E + RP + + +NI + +T+ NSPS
Sbjct: 189 VENVNIIG-KGTIDGNSDFDTWW--FKAKEKRIAWRPRTLFLNACKNILVEGVTIKNSPS 245
Query: 213 WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
W +HP+ S + ++I P +PNTD ++P+SC N I GDDC+A+KSG
Sbjct: 246 WTIHPLMSDHLKFINLSIENPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSGKID 305
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332
+ ++ + IR S AV+ LGSEMS G++ + E ++ G+RIKT
Sbjct: 306 ISKKNPVSSENINIRNCNMRSGHGAVV-LGSEMSSGLKSIFIEKCIFNATDRGLRIKTRR 364
Query: 333 GRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNI 380
GRG G + +++++ + M + F I Y D + LPV I +I
Sbjct: 365 GRGSKGIIDNIHMKNIKMDKVLTPFSINSFYFCDDDGKTEYVWSKEKLPVDDKTPYIGSI 424
Query: 381 NYRDMVAENVTM-AARLEGIAGDPFTGICISNVTIELTNKPKK 422
D+ N + AA + G+ + + NV++ K+
Sbjct: 425 YVEDVTCTNAHVCAAFMYGLPEQKIEKVSMKNVSVSFDENAKE 467
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 195/401 (48%), Gaps = 57/401 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ ++G D T +T+A + AI+ + GG ++ VP G +L+G +L S+ L L
Sbjct: 56 KITDYGASLDSTVKSTEAIRKAIEAC---HTNGGGRVIVPKGTFLSGPIHLKSNVNLHLE 112
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG- 172
A +L S+D ++ +PL + R E YS LI+ ++ ITG NG +DG
Sbjct: 113 DGAKILFSRDVNDY---KPL-VFSRWEGMECMNYSPLIYAYEQENIAITG-NGILDGNAN 167
Query: 173 -ELWW----------------------------------RKFRAGELKYTRPYLIEIMYS 197
E WW R+ G+ Y RP I+ S
Sbjct: 168 NEYWWPWKAKKEYGWKEGIPNQLAAVKILTQQVKDLVPARERIHGDGSYLRPPFIQPYLS 227
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+N+ I+++ +IN+P WN++PV +V V+ + ++ PN DG +P+SC N I CY
Sbjct: 228 KNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPESCKNVLITGCYF 285
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
+GDDC+A+KSG ++ G P + II V+ +GSE+SGG +++ A+++
Sbjct: 286 DTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHGGVV-IGSEISGGARNIFAQNL 344
Query: 318 TAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL 374
+DS + +R+KT+ RGG +++VY+R + + T K A + + P + L
Sbjct: 345 I-MDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEKPGD-----FL 398
Query: 375 PVIQNINYRDM-VAENVTMAARLEGIAGDPFTGICISNVTI 414
P I+NI+ ++ + + + P + ISN TI
Sbjct: 399 PTIRNISVENLNIKQGGKFGVLINAYKESPVENLRISNSTI 439
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 177/355 (49%), Gaps = 25/355 (7%)
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
+ DGTT K+ + ID + GG L VP G++L +L S L L A LLA
Sbjct: 23 LADGTTDQAKSLQQTIDSCG---ATGGGTLIVPAGRYLISPISLCSRVNLQLASGATLLA 79
Query: 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
S + ++ P +LI G +LTDV +TG GTIDG G +WW++F
Sbjct: 80 STNAADYTPKLP----------------NLINGDSLTDVSLTG-TGTIDGNGAVWWQRFI 122
Query: 181 AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
RP LI + S+N+ I LTLINSPS+++ P +V +Q +TI AP SPNTD
Sbjct: 123 DSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPSDSPNTD 182
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
GI+P +CT+ I++C I +GDD +A+K G I P + + IR C ++
Sbjct: 183 GIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRN--CRFLHGHGLS 238
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
+GSE S G+ V + T + +G+RIK+ G GG ++++ ++TM + I +
Sbjct: 239 VGSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQNLSYSQITMTNVTNPLIIDLA 298
Query: 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
Y + +N Y +P + + + A L G+ + +SN+ I
Sbjct: 299 YSLNNNNGY-ASDIPSVSGLTIDQLSVTGAKNAGSLVGLTNSLLQNLTLSNLQIS 352
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 194/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ +L EF VG+G T T AF AI+ LS +GG L VP G WLTG L S+ L
Sbjct: 48 RTVNLAEFNAVGNGETLCTSAFADAINTLS---EQGGGHLVVPAGVWLTGPIVLKSNIDL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K AV+L S D +P++E + G DT R S I G NL +V ITG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLENVAITGE-GAIDG 158
Query: 171 QGELW------------WRK--FRAGELK------------------------------- 185
G W W++ R G K
Sbjct: 159 NGHYWRPLKREKVTESVWKQTTARGGVYKRPTYWFPYPETLKGDTISNMNVPQNLQTEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+V+ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G P + +++ T +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG+++V + + ++ G+R K+ GRGG V+++++ ++M + + +
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFN 397
Query: 355 FWITG-------SYGSHPDNNYDP----HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G G +P P +NI+ ++++ A GI P
Sbjct: 398 LYYGGKSAVEVLESGEKVPAKVEPLPVDETTPCFRNIHVKNLICAGARRALFFNGIPEMP 457
Query: 404 FTGICISNVTI 414
+ + ++ I
Sbjct: 458 IENVVLEDIDI 468
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 25/354 (7%)
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG 144
EGG+ L VPPG++ L + TL+L + A L A D WP++ P GR T
Sbjct: 110 EGGT-LRVPPGRFAISPVFLKARMTLWLEEGAELCALHDRAGWPILPPRDDAGRVIGTWE 168
Query: 145 G----RYSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQ 198
G +++ + + + ITG G +D G+ WW + RP + + + Q
Sbjct: 169 GLPEAAFAAPLTAIDCDGLTITG-LGILDAGGDRGDWWSWPKETRAGARRPRALFLAHGQ 227
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
+Q+S +T+ NSPSW VHP + G+ I P SPNTDG+NP+SCT+ + +
Sbjct: 228 GVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFS 287
Query: 259 SGDDCVAVKSGWDQYGIAYGM-----PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
GDDC+AVKSG G G+ PT++L + ++ LGSEMSG I DV
Sbjct: 288 VGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMV-LGSEMSGDITDVT 346
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPD------N 367
I ++ G+RIKT GRGG V V+ + M+ + I Y PD
Sbjct: 347 VTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYCDPDGRSPEVQ 406
Query: 368 NYDPHAL----PVIQNINYRDMVAENVTM-AARLEGIAGDPFTGICISNVTIEL 416
+ P + P I +I + D++A +V + A + G+ P TG+ + N L
Sbjct: 407 SRSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLKNFRASL 460
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 87/489 (17%)
Query: 37 NSDWFEYSAI----------SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG 86
N+DW Y I S +S S+ +FG V DG T +T AF+ AI + ++G
Sbjct: 49 NTDWV-YEGIEFDMPRVQEPSFGNYSVSITDFGAVSDGLTKSTAAFEKAIADVV---AKG 104
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
G ++ VP G WLTG L S+ L + A++L S+D ++P+++ + G +T R
Sbjct: 105 GGKVIVPRGMWLTGPIVLKSNINLHVEDGALVLFSKDFDDYPLVK---TSFEGLNTF--R 159
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGEL-------------WWRKFRAGEL--------- 184
S I G +L +V ITG G IDG G+ W ++G +
Sbjct: 160 CQSPISGRDLENVAITG-KGVIDGNGDAWRPVKKGKMTESQWKTLLKSGGVLSDDGKIWY 218
Query: 185 ------------------------------KYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
+ RP ++ ++ + + + T NSP+WN
Sbjct: 219 PTESSKRGAVTGNFNVPLDLTEKEQFEPIKDFMRPVMVSLINCKKVLLDGPTFQNSPAWN 278
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HP+ V ++ +T+ P S N DG++ +SC N+ I + GDD + +KSG DQ+G
Sbjct: 279 IHPLMCEDVTIRNLTVRNPWYSQNGDGLDLESCKNSVIYNNTFDVGDDAICIKSGKDQHG 338
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
G+PT+ +I++ + +GSEMS G+++V + T I ++ G+R K+ GR
Sbjct: 339 RDRGIPTENVIVKNNVVYHGHGGFV-VGSEMSSGVKNVHVSNCTFIGTDIGLRFKSTRGR 397
Query: 335 GGFVKDVYVRRMTM-----KTMKWAFWITGSY----GSHPDNNYDPHALPVIQNI-NYRD 384
GG V+++Y+ + M + + + + G+ + +PV + +++D
Sbjct: 398 GGVVENIYISNIDMINIPTQAISFNLFYGGNSPTMDAEQGGAKKEEKLMPVTEETPSFKD 457
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCEL 444
+ +N+ +A E +A + + NV IE N K + T + S G+ K +
Sbjct: 458 IYMKNIRVAGADEALALQGLPEMNLQNVNIE--NAVLKAKKGITAVD--SDGIVLKNVRV 513
Query: 445 LPDHEPAQT 453
+ PA T
Sbjct: 514 ETEQGPALT 522
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 193/432 (44%), Gaps = 79/432 (18%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ +G DG T NT A AID GG + +P G W+TG L S+
Sbjct: 264 RKDTFNIVRYGAKADGFTVNTTAIAQAIDLA---HEAGGGTVLIPAGVWVTGPLKLKSNV 320
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L K A+L S + ++P++E + G+ + R + I+ ++ ITG G +
Sbjct: 321 NLHLQKGALLQFSNNRDDYPIVE---TTWEGQ--KALRCHAPIWAVGQVNIAITG-QGIM 374
Query: 169 DGQGELW------------WRKF--------RAGELKY---------------------- 186
DG GE+W WRK + G+ Y
Sbjct: 375 DGSGEVWKQVKKNKLTSTQWRKLVESGGVVGKKGDAWYPSEQSRYGNEDVRDWANLWVEG 434
Query: 187 ------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
RP +I I +N+ I +T NSP+W +HP+ S + ++ + + P
Sbjct: 435 KTLEDYMTVKDFLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPW 494
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
N D ++ +SC+ ++ C +GDD + +KSG D+ G G+PT+ +II+ T
Sbjct: 495 FGQNNDALDLESCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFHG 554
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG+++V ++ + + ++ G+R KT RGG V+++Y+ + M +
Sbjct: 555 HGGFV-IGSEMSGGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNIPGE 613
Query: 355 FWITGSYGSHPDN---NYDPHALPVI------------QNINYRDMVAENVTMAARLEGI 399
+ Y D + D HALPVI +N +++V+ A L G+
Sbjct: 614 AILFDMYYEAKDPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGL 673
Query: 400 AGDPFTGICISN 411
P GI I +
Sbjct: 674 PEMPIRGIKIED 685
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 188/382 (49%), Gaps = 34/382 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V DGTT NT +AA+ + G ++VP G++ T S + S TL+L K AV
Sbjct: 87 YGLVADGTTDNTGKLQAALSTCPK-----GGTVYVPAGRYRTSSLFMKSCTTLYLEKGAV 141
Query: 118 LLASQDEKEWPVIEP-LPSYGRGRDT-----EGG---RYSSLIFGTNLTDVVITGDNGTI 168
LL D +P++ +PS + EG ++ L+ T + DVV+TG+ GT+
Sbjct: 142 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 169 D--GQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
D Q WW + + + RP + + S+N+ + +T+ NS SW +HP++ + +
Sbjct: 201 DCDAQNGDWWINQKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLL 259
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ + +I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVI 319
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVR 344
R + I +GSEMSGG++D+ ++ G+R+KT GRG + + R
Sbjct: 320 RN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 378
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPH-----ALPV------IQNINYRDMVAENVTMA 393
+ M+ +K F I Y PD + P+ A+PV + ++ D+VA + A
Sbjct: 379 NVEMRGVKTPFVINMFYFCDPD-GHSPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFA 437
Query: 394 A-RLEGIAGDPFTGICISNVTI 414
+G+ P I + NVTI
Sbjct: 438 GCYFDGLPEQPIERISMKNVTI 459
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 192/437 (43%), Gaps = 77/437 (17%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
++ +A + S+ FG GDG + NT+A AI S+ +GG + +P G W+TG L
Sbjct: 53 VNIKADTISIVRFGAQGDGISLNTQAINRAIAETSQ---KGGGVVLIPAGVWVTGPIELK 109
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
S+ L + +DA+LL + D ++ ++E R S I G+NL ++ ITG
Sbjct: 110 SNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAWRNQSPISGSNLENIAITG-T 163
Query: 166 GTIDGQGELW------------WRKF---------------------------------- 179
G IDG G W W+K
Sbjct: 164 GIIDGNGGAWRMVKKSKMTASQWKKLVESGGVLNEEKNIWYPSASSLNGSKTKNPSAVVP 223
Query: 180 ------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
A + RP L+ + + I + +T NSP+WN+HP+ + V+ + + P
Sbjct: 224 GKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNP 283
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ N DGI+ +SC N +E+ GDD + +KSG D+ G +PT+ +IIR
Sbjct: 284 WYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYH 343
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ +GSEMSGG +++ D + I ++ G+R KT GRGG V+++++ R++M +
Sbjct: 344 AHGGFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPG 402
Query: 354 AFWITGSYGSHPD------NNYDP---------HALPVIQNINYRDMVAENVTMAARLEG 398
+ Y D + + A P +N +D+V A G
Sbjct: 403 EAILADMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRG 462
Query: 399 IAGDPFTGICISNVTIE 415
+ G+ + N++I+
Sbjct: 463 LPEMNIKGMSLENISIK 479
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 189/382 (49%), Gaps = 34/382 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V DGTT NT +AA+ + G ++VP G++ T S L S+ TL+L K AV
Sbjct: 79 YGLVADGTTDNTLKLQAALSTCPK-----GGTVYVPAGRYRTCSLFLKSNTTLYLEKGAV 133
Query: 118 LLASQDEKEWPVIEP-LPSYGRGRDT-----EGG---RYSSLIFGTNLTDVVITGDNGTI 168
LL D +P++ +PS + EG ++ L+ T + DVV+TG+ GT+
Sbjct: 134 LLGDNDRTHYPILPGVIPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 192
Query: 169 DGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
D E WW + + + RP + + S+NI + +T+ NS SW +HP++ + +
Sbjct: 193 DCDAENGDWWVTPKIKRIAW-RPRAVAAVDSENICLHGITVQNSYSWTIHPIFVKHLDLL 251
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ + +I
Sbjct: 252 NFNINNPYNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVI 311
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVR 344
R + I +GSEMSGG++D+ ++ G+R+KT GRG + + R
Sbjct: 312 RNCL-LDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 370
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPH-----ALPV------IQNINYRDMVAENVTMA 393
+ M+ +K F I Y PD + P+ A+PV + ++ D+VA + A
Sbjct: 371 NVEMRGVKAPFVINMFYFCDPD-GHGPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFA 429
Query: 394 A-RLEGIAGDPFTGICISNVTI 414
+G+ P + + NVTI
Sbjct: 430 GCYFDGLPEQPIERVSMKNVTI 451
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 206/482 (42%), Gaps = 96/482 (19%)
Query: 35 ARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPP 94
A +D + S + R + ++ + G V DG T NT A AID ++ GG + VP
Sbjct: 21 ASPADLPKVSVPTFRKDTIAISKLGAVADGLTLNTAAINKAIDQCTK---AGGGVVLVPR 77
Query: 95 GKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGT 154
G WLTG L S+ L L K A+L + + +P+I E R + I G
Sbjct: 78 GLWLTGPVTLKSNVNLHLAKGALLQFTNRREVYPLINTT-----WEGEEAIRNQAPISGV 132
Query: 155 NLTDVVITGDNGTIDGQGELW------------WRKFRA--------------------- 181
L ++ ITG+ G +DG GE W W+K A
Sbjct: 133 GLENIAITGE-GILDGAGEAWRMVKKGKLTSDQWKKLVASGGVLNDKQDTWYPTAQSLKG 191
Query: 182 ---------------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
G + RP ++ + + I + +T NSP+W +HP+ + ++
Sbjct: 192 ASEPVKAGQPMTYYEGIKDFLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLR 251
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
+T P + N DG++ +SC N ++DC GDD + +KSG D+ G G+PT+ + +
Sbjct: 252 RVTAKNPWYAQNGDGLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITV 311
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
R + +GSEMSGG++++ + T + ++ G+R KTA GRGG V++++V +
Sbjct: 312 RNSRVYHAHGGFV-IGSEMSGGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGI 370
Query: 347 TMKTMKWAFWITGSYGSHPD---NNYDPHALPVIQ------------------------- 378
M + + Y + D + + LPVIQ
Sbjct: 371 DMTDIAGEAILFDMYYAAKDPVPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAE 430
Query: 379 ---------NINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
+ +D++ EN + +R +G+ I + NV++ TNK N D
Sbjct: 431 TAILIRGLPEMAVKDILIENAVLQSR-KGLVCIEAENIRLKNVSLLTTNKTVMQVQNSRD 489
Query: 430 IT 431
IT
Sbjct: 490 IT 491
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 212/439 (48%), Gaps = 62/439 (14%)
Query: 16 ILLVGIIISLNTNGVESRKARNSDW-------FEYSAISCRAHSASLEEFGGVGDGTTSN 68
L+V I+I NT + A++S W E + ++ + ++ +FG V DG
Sbjct: 16 FLIVFILIVTNTANL---AAKSSPWDIADKIVAELNPVTFPDKTYNIADFGAVADGRMPC 72
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
AF AI S +GG ++ VP G + + G S+ + L A+L S +++++
Sbjct: 73 KGAFDKAITQCS---DQGGGRIIVPAGTYYMNGPLVFKSNVNIHLEDGAILNFSSNQEDY 129
Query: 128 PVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG-------------- 172
LP+ R TE YS LI+ ++ ++ +TG GTI+G G
Sbjct: 130 -----LPAVITRWEGTELFNYSPLIYAYHVQNIALTGK-GTINGNGSKKFSAWADNQNID 183
Query: 173 -ELWWRKFRA---------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
E+ R R GE RP IE N++I +T+ +SP W +HP++ ++
Sbjct: 184 KEILRRMGRENLPIYRRIFGEGFRLRPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFCNN 243
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
VIV+ +T+ + + N DG +P+SC+N IE C +GDD +A+KSG D G PT+
Sbjct: 244 VIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTE 301
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
++IR T S + V +GSE+SGG+++V E+I+ + S + + K+ + RGG+++++Y
Sbjct: 302 NVVIRNCTFWSKINGV-CIGSEISGGVRNVFIENISILKSSNAIYFKSNLDRGGYIENIY 360
Query: 343 VRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT------MAARL 396
VR + +++ A + + P + + ENVT A +
Sbjct: 361 VRNIQADSVRTALVRVEPNYKGERSGFHPTL--------FNKITVENVTCGQTNECAISM 412
Query: 397 EGIAGDPFTGICISNVTIE 415
G P I + N+T++
Sbjct: 413 AGFPELPIRNITLKNITVD 431
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 192/428 (44%), Gaps = 83/428 (19%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ + ++G VGDG NT AF AI+ ++ GG ++ +PPG W TG L S L
Sbjct: 18 YTVMITDYGAVGDGVYDNTLAFHQAIEACAK---AGGGKVVIPPGIWHTGPLTLQSRIEL 74
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
A+++ S+ + +P+ + +Y GR R S + G L D+ TG +G DG
Sbjct: 75 HASAGALVMFSKQFEAYPI--RMSAY-EGRQMF--RCQSPLDGEGLEDIAFTG-SGIFDG 128
Query: 171 QGELWWRKFRAGEL---------------------------------------------- 184
GE W R + G+L
Sbjct: 129 GGEAW-RPVKQGKLTESQWDRLIHTGGVVDDGGLWWPTPAARDGMENLARIEQTGSRNPQ 187
Query: 185 ------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
Y RP L+ + + I ++ T NS +W +HP S + +Q IT+ P + N
Sbjct: 188 DYEPVRDYLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 247
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++ DSC +E+ GDD + +KSG ++ G G P++++ IR T +
Sbjct: 248 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGI 307
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-----TMKW 353
+ +GSEMSGGI+DV D I ++ G+R K+ GRGG V+++++ R+ M+ + +
Sbjct: 308 V-VGSEMSGGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMREIDGDAISF 366
Query: 354 AFWITGSYGSHPDNNYDPHAL-------PVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
+ G GS Y A+ PV +NI +D+V A + G+ P
Sbjct: 367 NLYYEGKAGS---GEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMP--- 420
Query: 407 ICISNVTI 414
+ NVT+
Sbjct: 421 --VENVTV 426
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 192/379 (50%), Gaps = 30/379 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG +GDG T T++ + ID R GG ++ +P G++LTGS +L + TL L
Sbjct: 51 NVRDFGAIGDGITLETESLQRTID---RCGVLGGGEVIIPAGRYLTGSVSLRTKVTLRLA 107
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ V+L S D + V + G+ G Y LI + + + G G+I+G
Sbjct: 108 AECVILGSPDLAHYAVSQ---VRWEGKWIPG--YLGLIHALDARKIAVLGP-GSIEGNVA 161
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ R + L+ RP LIE +Y ++ + + + W++HP +++ + +T+ +
Sbjct: 162 VAGRPTKENPLR--RPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLTVRST 219
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+T N DGI+ DSC + I+ C I SGDDC+++KSG + PT+ + I T
Sbjct: 220 LT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTLEG 277
Query: 294 PFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
A I +GSE S GI+ V E +T++ + V IK+ VGRG F++D+ VR M+ M
Sbjct: 278 RGFACIGIGSETSAGIRRVLIEGCRVTSV-YKFAVYIKSRVGRGAFIEDLTVRDMSAAKM 336
Query: 352 KWAFW-ITGSYGSHPDNNYDP--HALPVIQNINYRDM---------VAENVTMAARLEGI 399
+ F I+ + D N P LP+ +NI++ + A+ ++ L+G+
Sbjct: 337 RMGFLKISQTSAGVQDENPVPGLDGLPLFRNISFLRIHVDDAPVLVEAKEISADKLLDGL 396
Query: 400 AGDPFTGICISNVTIELTN 418
D FTG C +EL N
Sbjct: 397 TLDGFTGTCAKG--LELAN 413
>gi|356566220|ref|XP_003551332.1| PREDICTED: uncharacterized protein LOC100780755 [Glycine max]
Length = 366
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 97/139 (69%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E + A D FEY AI+CR HSA L +FGGVGDG TSNTK F+ AI +LS + S+GG+ L
Sbjct: 117 ECKVANGLDCFEYPAINCRKHSAVLTDFGGVGDGKTSNTKGFQYAISNLSHYASDGGALL 176
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
VPPGKWLTGSFNLTSHFTLFL K+A +L SQDE +WP + LPSYGRGRD G+ +
Sbjct: 177 VVPPGKWLTGSFNLTSHFTLFLQKEATILGSQDESKWPTLPVLPSYGRGRDAPYGQGDII 236
Query: 151 IFGTNLTDVVITGDNGTID 169
I G + + + + ID
Sbjct: 237 IQGLTILAPIDSPNTDGID 255
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 217 PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
P +I+QG+TILAP+ SPNTDGI+ + + I
Sbjct: 229 PYGQGDIIIQGLTILAPIDSPNTDGIDLEDSVSVLI 264
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 192/408 (47%), Gaps = 75/408 (18%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG VGDG T AF+ + + GG ++ VP G +LTG + S+ L++ K+A
Sbjct: 42 DFGAVGDGIMDCTDAFRRV---MMAANTAGGGRVVVPAGIYLTGPIHFKSNVNLYVSKEA 98
Query: 117 VLLASQD-EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--E 173
+ SQD EK P++ R E YS LI+ ++ ITG+ G +DG G E
Sbjct: 99 TVKFSQDLEKYLPMV-----LNRFEGVELYNYSPLIYSYGAVNIAITGE-GILDGNGDNE 152
Query: 174 LWW------------------------------------RKFRAGELKYTRPYLIEIMYS 197
WW RKF +G Y RP I+ S
Sbjct: 153 HWWPWKGLTQYGWQEGQAHQAEDRDVLFAMAEQNVPVEERKFGSGH--YLRPSFIQFYNS 210
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+NI I +T+ +SP W + PV ++ + + I+ PNTDG NPDSC N I++CY
Sbjct: 211 KNILIEGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNPDSCKNILIKNCYF 268
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
+GDDC+A+KSG + G +P + ++I+ + I +GSE+SG +++V A D
Sbjct: 269 NNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSEISGSVRNVFA-DH 326
Query: 318 TAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP--- 371
+DS + +R KT RGG ++++Y + T+K++ +I D +Y+
Sbjct: 327 NVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIV-------DMDYEEGDA 379
Query: 372 -HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
P+++NI EN+ GI + ISNV + TN
Sbjct: 380 GEYTPIVRNI-----FVENLESYGGKTGILMSAYDRTPISNV--QFTN 420
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 194/436 (44%), Gaps = 77/436 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++++FG V DG T NT+A AI +S + GG ++ +P G WLTG L S+ L
Sbjct: 12 YEVNIKDFGAVADGKTLNTEAINKAIQKVS---ARGGGKVIIPQGLWLTGPIELQSNVNL 68
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ +++++L S + ++P+IE + G +T R S I N ++ ITG +G DG
Sbjct: 69 YTEENSLILFSDNFNDYPIIE---TSFEGLETR--RCQSPISAVNAENIAITG-HGVFDG 122
Query: 171 QGELW------------WRKFRA--------------GELK------------------- 185
G+ W W+ A G LK
Sbjct: 123 AGDSWRPVKKGKMTESQWKSLLASGGVVENNIWYPTEGSLKGAKACKEFNNPEGIETEEQ 182
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ + +N+ + +T NSPSW +HP+ + + G+ + P S N
Sbjct: 183 WNEIRPWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNG 242
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SCTN + + +GDD + +KSG D+ G G P + +I++ + +
Sbjct: 243 DALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFV 302
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWIT 358
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+++++ + M + A
Sbjct: 303 -VGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINMIDIPHEALLFD 361
Query: 359 GSYGSHPDNNYDPHAL---------------PVIQNINYRDMVAENVTMAARLEGIAGDP 403
YG L P ++I ++ A V A G+ P
Sbjct: 362 LFYGGKAAGEETAEELAGRMKAEVPPVTEETPAFRDIYISNVTARGVGRAMFFNGLPEMP 421
Query: 404 FTGICISNVTIELTNK 419
+ I +VT+ K
Sbjct: 422 IRNVHIKDVTVSRAEK 437
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 69/420 (16%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
L +FGG GDG T N++AF+ AI +L+ S+GG +L VP G WLTG L ++ L L
Sbjct: 51 LTDFGGSGDGVTLNSEAFEKAIQYLA---SKGGGRLIVPQGVWLTGPIELENNVELHLSD 107
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
+++++ SQD+ +P++E + + R + ++V +TG G IDG G++
Sbjct: 108 NSIVVFSQDKSLYPIVETV-----FEGCKTFRCKPQLSAVRKSNVAVTG-KGIIDGAGDI 161
Query: 175 W------------WRKF--------RAGELKY---------------------------- 186
W W + GEL Y
Sbjct: 162 WRLGKKNEMPPMVWNECIQSGGILSEDGELWYPTESYYRGAKDAIQNIVPWAKTMEDFES 221
Query: 187 ----TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
RP ++ + + + NSP WNVH S +IV I + P + N DGI
Sbjct: 222 VRDFLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGI 281
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+ +SCTN + D + GDD + +KSG D+ G G+P +I+ C + +G
Sbjct: 282 DIESCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFV-VG 340
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSY 361
SEMSGG++++ + ++ G+R K+ GRGG V+++Y++ + M + A Y
Sbjct: 341 SEMSGGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMNDIVSEALLFDLFY 400
Query: 362 GSH-----PDNNYDPHALPVIQNI-NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
G P+ + D A + ++D+ VT + + + + NV IE
Sbjct: 401 GKRVSVKLPEQDEDMIAFDADETTPQFKDIYISQVTCHGAKRAMLFNGLPEMNVRNVFIE 460
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 184/415 (44%), Gaps = 72/415 (17%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
E+G G +T A AI SE +++PPG +L+ + L S+ L + K A
Sbjct: 15 EYGADPKGLDDSTGAINEAITQ----ASETRGIVYIPPGNYLSRNIILRSNVMLLIDKGA 70
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
V+ S D K +P+IE R LIFG ++ +V I G+ G DGQG WW
Sbjct: 71 VVKFSTDYKSYPIIET-----RREGVHHCGVMPLIFGKDVRNVRIIGE-GVFDGQGYAWW 124
Query: 177 --RKFRAGE--------------------------------------------------- 183
R+FR E
Sbjct: 125 PIRRFRVTEDYWRRLVESGGVVGDDGKTWWPTRNAMEGAEAFRKITSEGGKPSTEDCERY 184
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
++ RP L+++ ++N+ I +T +SP W +H +YS V + + +AP SPNTDG+
Sbjct: 185 REFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTDGVV 244
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALG 302
DS ++ + C I GDDC+ +KSG D+ G G+P++ I C+ +G
Sbjct: 245 VDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSEN--IHASGCLMKRGHGGFVIG 302
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT-MKWAFWITGSY 361
SEMSGG+++V +D +E GVRIKT GRGG +++VYV + M+ + A + Y
Sbjct: 303 SEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVDMFY 362
Query: 362 GSHPDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
P +P P I+ + R+ + A + G+ P I I N I
Sbjct: 363 EKRP---VEPVSERTPKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRI 414
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 192/435 (44%), Gaps = 77/435 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ +L++FG VGDG T+AF AID L + +GG +L VP G W TG L S+ L
Sbjct: 48 NEVNLKDFGAVGDGMHLCTEAFAKAIDALDK---KGGGKLTVPAGVWFTGPIVLKSNINL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K A++L S D +P++E + G DT R S I G NL +V ITG G IDG
Sbjct: 105 HIEKGAIVLFSPDVDLYPLVE---TVFEGLDTR--RCQSPISGRNLVNVAITG-QGAIDG 158
Query: 171 QGELW------------WRKF--RAGELK------------------------------- 185
G W W+ R G K
Sbjct: 159 NGHYWRPLKKQKVTEGQWKAATSRGGVYKRPDYWFPYPETLKGDTISNMNVPQNLKTEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ + +N+ + + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G + +I+ T +
Sbjct: 279 DGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM-----KTMKWA 354
+GSEMSGG++++ + + ++ G+R K+ GRGG V+++++R ++M + + +
Sbjct: 339 -VGSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFN 397
Query: 355 FWITGSYGSHPDNNYD-----------PHALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G + + P +NI+ + N A GI P
Sbjct: 398 LYYGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMP 457
Query: 404 FTGICISNVTIELTN 418
GI + ++ I N
Sbjct: 458 IDGITLKHIRISAKN 472
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 179/404 (44%), Gaps = 42/404 (10%)
Query: 41 FEYSAISCRA--HSASLEEFGGVG----DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPP 94
E+ +SC +A+ + V +G +N +A + A+ + + G L +
Sbjct: 73 LEFRTVSCAGLVDAAAFQLLPDVALDDEEGARANAQALERAVAAVPQ-----GGTLRLAA 127
Query: 95 GKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR----YSSL 150
G W L S+ L + AVL A + WP++ GR + G +++
Sbjct: 128 GVWTASPVRLKSNMAFHLAQGAVLRAPSTRRGWPILPARDEAGRMLGSWEGLPDACFTAP 187
Query: 151 IFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
+ + ++VI G G +DG G+ WWR + RP + ++ + + T+
Sbjct: 188 VHAIGVDNLVIEG-RGILDGSGDKGDWWRWPKETRDGARRPRGLHLVSCRKTNLLGFTIR 246
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
N+ SW +HP +I G++I AP SPNTDG NP+SC N I GDDC+AVK+
Sbjct: 247 NAASWTIHPQGCEDLIAAGLSIAAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKA 306
Query: 269 GW-------DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
G D G+ ++ R + +GSEMSGG+ DV ED I
Sbjct: 307 GKRGPDGEDDHLAETRGVRVGHCLMER------GHGGLVIGSEMSGGVHDVAVEDCDMIG 360
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------P 371
++ G+R+KT GRGG V ++ +RR+ + +K A Y D + D
Sbjct: 361 TDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAHYHCDADGHDDWVQSRNPAPVD 420
Query: 372 HALPVIQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTI 414
P I I D+ N++ AA G+A P + I NVTI
Sbjct: 421 SGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPIRNVTIRNVTI 464
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 180/409 (44%), Gaps = 41/409 (10%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+E R A + E +A S R A +E +G +N A + A+ + G
Sbjct: 73 LEFRTAPCAGLVEATAFSLRPDIALDDE-----EGARANATALENAVAAVP-----AGGT 122
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR--- 146
L + PG W L S TL L + AVL A WP++ GR + G
Sbjct: 123 LRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPSVRNRWPILPARDEAGRMLGSWEGLPDA 182
Query: 147 -YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQIS 203
+++ + ++VI G G +DG G+ WW + RP + ++ Q+
Sbjct: 183 CFAAPVHAIGADNLVIEG-RGILDGSGDKGDWWSWPKETREGARRPRGLHLVSCHKTQLL 241
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
T+ N+ SW +HP + G+TI+AP SPNTDG NP+SC N I GDDC
Sbjct: 242 GFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDC 301
Query: 264 VAVKSGW-------DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+AVK+G D G+ + +++R + +GSEMSGG+ DV ED
Sbjct: 302 IAVKAGKRGPDGEDDHLAETRGISVRHCLMQR------GHGGLVIGSEMSGGVHDVTVED 355
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD------ 370
I ++ G+R+KT GRGG V ++ +RR+ + ++ A Y D + D
Sbjct: 356 CDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRN 415
Query: 371 ----PHALPVIQNINYRDMVAENVTMAARL-EGIAGDPFTGICISNVTI 414
P + I D+ N+ AA + G+ P I + N+TI
Sbjct: 416 PAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 216/470 (45%), Gaps = 70/470 (14%)
Query: 8 KRTQVICIILLVGIIISLNTNGVESRKARN----SDWFEYSAISCRAHSASLEEFGGVGD 63
KR + CI+L+ ++ T+ SR +N + I C ++ +L++FG GD
Sbjct: 3 KRAVLSCIVLVYAFLLHAQTD--YSRYYQNLPKPMPTVQAPVIPC--NTVNLKDFGATGD 58
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
GT NT+AF AI L++ +GG +L VP G WLTG +L + L L ++AV++ S D
Sbjct: 59 GTAMNTEAFSKAISALNK---QGGGRLVVPAGIWLTGLISLKDNIDLHLERNAVIVFSPD 115
Query: 124 EKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------- 175
+++ PV + P + + I + +V ITG+ G IDG GE W
Sbjct: 116 KRDLIPVKDGKPD---------AKAAPCIRASKRKNVSITGE-GIIDGNGEYWRPVKRGK 165
Query: 176 -----WRKFRA--------GELKY-------------------TRPYLIEIMYSQNIQIS 203
W +++A G+L Y R +L+ QN+ +
Sbjct: 166 VSDTEWNQYKAMGGTITEKGDLWYPFNLKHLPNVADNYDAQEKMRTHLVRFTDCQNVLVQ 225
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
+TL NSP +++ P ++VI+ + ++ P + N D I+ +C N I + I +GDD
Sbjct: 226 GVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNCKNVLIVNNTIDAGDDG 285
Query: 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323
+ +K G Q G+ G P + + I+ + +GSE GG++++ + T ++
Sbjct: 286 ICMKGGVGQKGVKDG-PCENINIQDNIVYHAHGGFV-IGSEFCGGMKNIFVHNNTFAGTD 343
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMK------WAFWITGSYGSHPDNNYDPHALPVI 377
+G+R K+ VGRGG D+Y+ ++ M +K ++ + G+ N P
Sbjct: 344 TGLRFKSGVGRGGTTSDIYISKIYMTDIKDEAIVFQCDYVDRAVGAKAQTNKPTSFSPNF 403
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
+I+ D+V + G G GI +SN TI T K + C
Sbjct: 404 TDIHISDVVCYGAKTGIKATGAKG-MIHGIEVSNSTIIYTKTDKAIDPEC 452
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 169/353 (47%), Gaps = 69/353 (19%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ +FG VGDG N+ AF AID++S +GG ++ VP G WLTG + S+ L
Sbjct: 61 YAVSIVDFGAVGDGVFDNSDAFAQAIDNVSE---KGGGRVVVPRGLWLTGPIIMKSNIDL 117
Query: 111 FLHKDAVLLASQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
L AV+ S D ++P+I E L +Y R S + L ++ TG NG
Sbjct: 118 HLEDGAVVHFSSDFDDYPLIDTSFEGLNTY---------RCMSPVHAHGLENIAFTG-NG 167
Query: 167 TIDGQGELW------------WRK-----------------------------FRAGELK 185
DG G+ W W+K F +LK
Sbjct: 168 IFDGNGDAWRPVKKSKMTESQWKKLVNSGGVLSDDGEIWYPSEKSKAGDSRDNFNVPDLK 227
Query: 186 ----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT 235
+ RP ++ I + + + T NSP+WN+HP+ S +I++ +T+ P
Sbjct: 228 TKEDFEKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWY 287
Query: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295
S N DG++ +SC N I + GDD + KSG ++ G G+PT+ +I++
Sbjct: 288 SQNGDGLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGH 347
Query: 296 SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +GSEMSGG+++V + T I ++ G+R K+ GRGG V+++Y+ + M
Sbjct: 348 GGFV-IGSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDM 399
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 186/389 (47%), Gaps = 35/389 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG + + A +AAI + G+++ P G + T L SH T+ L
Sbjct: 82 NIRDFGAKGDGESMDAAAIQAAIAAAPK-----GARIVFPAGTYRTTPIFLKSHITIELM 136
Query: 114 KDAVLLASQDEKEWPVI----------EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
+ A LL + +P++ E G Y+SL+ G + DV I G
Sbjct: 137 EGATLLGHHERDAYPILPGKLTKEDDNENFYFLGTWEGEIAECYASLLTGIGVEDVRIIG 196
Query: 164 DNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
+ GT+DG G+ WW + + RP + ++ +I + +T+ NSPSW VHP+ SS
Sbjct: 197 E-GTLDGNGQNGDWWINCKVKREAW-RPRSLYLLECHDILVEGITIKNSPSWTVHPIRSS 254
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ +T+ P SPNTDGI+P+SC I GDDC+A+KSG + P+
Sbjct: 255 KLRFINLTLNNPKDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERRPS 314
Query: 282 KQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338
+ +IIR C+ + + LGSEMSGG+++V E D++ G+RIKT GRG +
Sbjct: 315 ENIIIR--NCLMQYGHGAVVLGSEMSGGVKNVFVERCFFEDTDRGLRIKTRRGRGNTAII 372
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYRDMVAE 388
+YV+ + MK + F + Y PD + P+I ++ + +M +
Sbjct: 373 DQIYVKNIQMKGVLTPFTLNAFYFCDPDGKTEYVRTKEKLAVDERTPLIGSLEFENMECK 432
Query: 389 NVTM-AARLEGIAGDPFTGICISNVTIEL 416
+ + A + G+ + N++I
Sbjct: 433 DAEICAGFIYGLPEQKVKSLTFKNISINF 461
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 191/437 (43%), Gaps = 77/437 (17%)
Query: 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLT 105
+ +A + S+ FG GDG + NT++ AI S+ +GG + +P G W+TG L
Sbjct: 60 VHVKADTISIVRFGAQGDGISLNTQSINRAIAETSQ---KGGGVVLIPAGVWVTGPIELK 116
Query: 106 SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN 165
S+ L + +DA+LL + D ++ ++E R S I G+NL ++ ITG
Sbjct: 117 SNINLHIQRDAILLFTDDFDQYKLVE-----ANWEGQPAWRNQSPISGSNLENIAITG-T 170
Query: 166 GTIDGQGELW------------WRKF---------------------------------- 179
G IDG G W W+K
Sbjct: 171 GIIDGNGGAWRMVKKSKMTASQWKKLIESGGVLNDEKNIWYPSASSLNGSKTKNPSAVVP 230
Query: 180 ------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
A + RP L+ + + I + +T NSP+WN+HP+ + V+ + + P
Sbjct: 231 GKTAADYADVKDFFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNP 290
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+ N DGI+ +SC N +E+ GDD + +KSG D+ G +PT+ +IIR
Sbjct: 291 WYAQNGDGIDIESCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYH 350
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ +GSEMSGG +++ D + I ++ G+R KT GRGG V+++++ R++M +
Sbjct: 351 AHGGFV-IGSEMSGGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPG 409
Query: 354 AFWITGSYGSHPD------NNYDP---------HALPVIQNINYRDMVAENVTMAARLEG 398
+ Y D + + A P +N +D+V A G
Sbjct: 410 EAILVDMYYEAKDPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRG 469
Query: 399 IAGDPFTGICISNVTIE 415
+ G+ + N++I+
Sbjct: 470 LPEMNIKGMSLENISIK 486
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 191/393 (48%), Gaps = 35/393 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG +T + +AAI G ++F P G +LT L S+ TL L
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFPEGIYLTYPLFLKSNITLELG 139
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR--------YSSLIFGTNLTDVVITGDN 165
K AVLL +++ + +P++ + D+ G ++SLI G + +V I G+
Sbjct: 140 KGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE- 198
Query: 166 GTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
GTIDG WW + + + RP I + +N+ I +T+ NSPSW +HP+ S ++
Sbjct: 199 GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQNL 257
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ I P +PNTDG++P+SC + I GDDC+A+KSG + ++
Sbjct: 258 KFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSEN 317
Query: 284 LIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
L IR C+ + + +GSEMSGG+++V + ++ G+RIKT GRG G + +
Sbjct: 318 LYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDE 375
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMVAENV 390
++ + M + F I Y D + LPV I NI +D+ +
Sbjct: 376 IHASNIKMDKVLTPFTINSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDT 435
Query: 391 TMAA-RLEGIAGDPFTGICISNVTI--ELTNKP 420
+AA + G+ + + N+ I +L KP
Sbjct: 436 QVAAGYMYGLPERKIEKVTMENIYIKFDLNAKP 468
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 181/409 (44%), Gaps = 41/409 (10%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
+E R A + E +A S R A +E +G +N A + A+ + G
Sbjct: 73 LEFRTAPCAGLVEATAFSLRPDIALDDE-----EGARANATALENAVAAVP-----AGGT 122
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR--- 146
L + PG W L S TL L + AVL A WP++ GR + G
Sbjct: 123 LRLGPGVWTAFPVRLKSEMTLHLAEGAVLRAPSVRNSWPILPARDEAGRMLGSWEGLPDA 182
Query: 147 -YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQIS 203
+++ + ++VI G G +DG G+ WW + RP + ++ + Q+
Sbjct: 183 CFAAPVDAIGADNLVIEG-RGILDGSGDKGDWWSWPKETRDGARRPRGLHLVSCRKTQLL 241
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
T+ N+ SW +HP + G+TI+AP SPNTDG NP+SC N I GDDC
Sbjct: 242 GFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDC 301
Query: 264 VAVKSGW-------DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+AVK+G D G+ + +++R + +GSEMSGG+ DV ED
Sbjct: 302 IAVKAGKRGPDGEDDHLAETRGISVRHCLMQR------GHGGLVIGSEMSGGVHDVTVED 355
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD------ 370
I ++ G+R+KT GRGG V ++ +RR+ + ++ A Y D + D
Sbjct: 356 CDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRN 415
Query: 371 ----PHALPVIQNINYRDMVAENVTMAARL-EGIAGDPFTGICISNVTI 414
P + I D+ N+ AA + G+ P I + N+TI
Sbjct: 416 PAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 201/413 (48%), Gaps = 65/413 (15%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ ++ ++G V DG+ NT+A AI + + GG ++ +P GK++TG +L +
Sbjct: 51 KNQEFNVMDYGAVADGSVLNTEAIAEAIKACN---AAGGGKVVLPAGKYVTGPIHLLDNV 107
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L + + A +L + D+ +P+ SY TE +S LI+ + ++ ITG G +
Sbjct: 108 NLEIAEGAEVLFTTDKSLFPLAHT--SY---EGTELMNFSPLIYAKDKKNIAITGK-GVL 161
Query: 169 DGQGEL--WW-------------------------------------RKFRAGELKYTRP 189
+GQ WW R F GE + RP
Sbjct: 162 NGQANNGNWWPWCGNTKYGWAEGDPKQHSSLKKLKEDMSEKGVPVADRIFGMGE--FLRP 219
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
IE +N+ I ++T+IN+P W VHP+ S++V+V GIT+ + PN DG +P+ N
Sbjct: 220 TFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEYAKN 277
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
I++C +GDDC+A+KSG ++ G +P++ +++ I V+ +GSE+S G+
Sbjct: 278 VWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHGGVV-MGSEISAGV 336
Query: 310 QDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT----GSYGS 363
++V ++ + + + + +RIKT RGGFV++VYVR + + +K A G YG
Sbjct: 337 RNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGIYGV 396
Query: 364 HPDNNYDPHALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIE 415
+ +P + N+ ++ +N + G P + + NVTI+
Sbjct: 397 QKGS-----FMPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTIK 444
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 191/422 (45%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAIKVV---HDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G DT R S I N+ ++ ITG G DG
Sbjct: 113 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNVENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ S+I+ + + P S
Sbjct: 227 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 406 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 413 TI 414
+
Sbjct: 466 VV 467
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 193/417 (46%), Gaps = 78/417 (18%)
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
+A + AID +++ GG ++ +P G W TG+ L SH L L A L +++ V
Sbjct: 83 QAIQQAIDDMAQ---AGGGRVEIPAGIWYTGALELKSHVELHLVAGARLCFIRNKSN--V 137
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG-ELWW------------ 176
PL Y R E +S I+ D+ ITG GT+DGQ E W
Sbjct: 138 FYPL-RYTRWEGVECMNFSPFIYAEGAEDISITG-QGTLDGQADEFNWMPWKFGYFGEPD 195
Query: 177 ------RKFRAG-------------ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
R FRAG ++ RP I+ S++I+I + ++NSP W ++P
Sbjct: 196 QEEQRQRLFRAGAEGIPVQQRIFADDVSTLRPPFIQFYNSKDIRIMGVHIVNSPFWEINP 255
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
V +V ++G+ I + N DGI+P+S N IEDCY ++GDDC+A+KSG ++ G
Sbjct: 256 VLCENVWIKGVHIETDLY--NNDGIDPESSRNVLIEDCYFLTGDDCIAIKSGRNEDGRRI 313
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA--EDITAIDSESGVRIKTAVGRG 335
G+PT +IIR + I LGSE+SGG+ DV A + + + +R KT RG
Sbjct: 314 GVPTANVIIRHNRFANGHGG-ITLGSEISGGVHDVFATGNHFDSPNLDYPIRFKTNAMRG 372
Query: 336 GFVKDVYVRRMTMKTMKWA------FWITGSYGSHP-------------------DNNYD 370
G +++VYV+ + + A F+ G G + D Y
Sbjct: 373 GTLENVYVKDSVVNKARLAVVHADFFYEEGHAGENLPQLDNITLDGFWTAEGGSIDAKYA 432
Query: 371 PH----ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
+ A +I+N+ +RDM E V A LE I + NVTI +P +L
Sbjct: 433 FYLKGFADALIENVTFRDMKLEGVKGEAVLENI-----HALAFENVTINGKRQPDRL 484
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 196/399 (49%), Gaps = 54/399 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLH 113
+ +FG G A AAID SR EGG ++ +P G+W + G L SH L L
Sbjct: 44 ITDFGAEAGGEADCRPAVAAAIDRCSR---EGGGRVVIPAGRWFSKGPVVLKSHVNLHLE 100
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
AVL S DE ++ LP+ R TE YS LI+ T++ +TG G IDG+G
Sbjct: 101 AGAVLFFSSDEADY-----LPAVLTRWEGTEVYNYSPLIYAWQATNIAVTG-QGVIDGRG 154
Query: 173 EL----WWRKFRA--------------------GELKYTRPYLIEIMYSQNIQISNLTLI 208
W + +A GE Y RP ++E + ++ I +T +
Sbjct: 155 SHNFAHWKPRQKADQKALRRMGTDLVPVSDRLFGEGHYLRPAMLEPVNCTDVLIEGVTFV 214
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP W +HP+ +V V+G+T+ + + N DG +P+SCTN IEDC +GDD +A+KS
Sbjct: 215 DSPFWVIHPLACENVTVRGVTVDS--YNLNNDGCDPESCTNVLIEDCTFRTGDDGIAIKS 272
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G D G PT+ ++IR + S + V +GSE+SGG+++V E++ D +G+
Sbjct: 273 GRDNDAWRIGRPTENVLIRNCSFRSKANGV-CIGSEISGGVRNVVVENVRMSDVGNGIYF 331
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWI-TGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
K+ + RGG+++DV+V + +++ + Y S N+ P A +R V
Sbjct: 332 KSNLDRGGYIEDVFVCGVEADSVRKTLVLFEPDYKSESRENH-PTA--------FRGFVI 382
Query: 388 ENV------TMAARLEGIAGDPFTGICISNVTIELTNKP 420
E+V + G A P + IS +T+ T +P
Sbjct: 383 EDVRAQWAGKAGIDIRGFADMPVRDVTISRLTLASTPEP 421
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 61/412 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ +G V DG T T++ + AI S+ +GG ++ VP GK+L+G +L ++
Sbjct: 65 RDANYNIVSYGAVADGKTMATESIRKAILACSK---DGGGKVIVPSGKFLSGPIHLENNV 121
Query: 109 TLFLHKDA-VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
L L + A +L ++ + +P++ + E YS LI+ N ++ +TG G
Sbjct: 122 NLHLMEGAEILFSTNPDDFYPLV-----HTSFEGMELMNYSPLIYAKNKKNIAVTGK-GI 175
Query: 168 IDGQG--ELWW--------------------------------------RKFRAGELKYT 187
++GQ + WW R F G +Y
Sbjct: 176 LNGQASNDNWWTWKGSSAYGFKPGMPSQLDPNNLPKLMEMADTNVPVSNRTFGNG--RYL 233
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP IE +N+ I +T+IN+P W +HP+ S ++IV G+ I + PN DG++P+
Sbjct: 234 RPNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLDPEYS 291
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I++ +GDDC+A+K+G D+ G G+ T+ +I+R I V+ +GSEMS
Sbjct: 292 QNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHGGVV-IGSEMSA 350
Query: 308 GIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSH 364
G+++V + + + + + +R+KT RGG V VYV+ +T+ +K A IT +Y +
Sbjct: 351 GVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEVKEAVLHITMNYKDY 410
Query: 365 PDNNYDPHALPVIQNINYRDMVAEN-VTMAARLEGIAGDPFTGICISNVTIE 415
N + P I+NI D+ +N A +G+ I NVTI+
Sbjct: 411 K--NRTGNFTPQIRNILLEDVKVKNGGKYAIFADGLENSKIQNITFKNVTID 460
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 185/390 (47%), Gaps = 54/390 (13%)
Query: 36 RNSDWFEYSAISCRAHSASLEE-------FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGS 88
+ SDW + I + S + + FG D A AI+ ++ GG
Sbjct: 34 KQSDWKQMDVILKKIESPKIPQTDYVITAFGASADAQADARPAIMRAINAAAK---AGGG 90
Query: 89 QLFVPPGKWLT-GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGR 146
++ +P GKWL+ G L S L L + A LL S K + LP+ + R TE
Sbjct: 91 RVVIPAGKWLSNGPVELQSRINLHLEEGATLLFSAQTKHY-----LPAVFTRWEGTEIYG 145
Query: 147 YSSLIFGTNLTDVVITGDNGTIDGQGE---LWWRKFRA---------------------G 182
YS LI+ +TDV ITG GTIDG + L W K +A G
Sbjct: 146 YSPLIYANKVTDVAITG-KGTIDGNAQSEFLGWAKHQAADIAKLRQMGFDGVPLEKRQFG 204
Query: 183 ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
E + RP LI+I+ ++ + + + T +NSP W H VY+ V+G+ + + N DG+
Sbjct: 205 EGHFLRPSLIQILNAERVLLQDYTALNSPFWVNHLVYTDHAQVRGVKVDSMFA--NNDGL 262
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+ DS +E+ + +GDD +A+KSG D G G P++ +++R + + LG
Sbjct: 263 DIDSGRWILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLG 320
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SEMSGGI++V D + S R+K + RGG V+ V +R M + + K+ FW SY
Sbjct: 321 SEMSGGIKNVYFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAKYLFWFDLSYV 380
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENVTM 392
+ Y P Y+D+V EN+T+
Sbjct: 381 A----GYLGGNFPS----RYQDIVFENITV 402
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 190/422 (45%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 50 YQVNICDFGAKSDGVTLNTEAINKAIKVV---HDKGGGKVIIPEGLWLTGPIVLQSNVNL 106
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G DT R S I N ++ ITG G DG
Sbjct: 107 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDG 160
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 161 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 220
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ S+I+ + + P S
Sbjct: 221 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 280
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 281 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 340
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 341 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 399
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 400 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
Query: 413 TI 414
+
Sbjct: 460 VV 461
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 191/388 (49%), Gaps = 52/388 (13%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKD 115
FG + A AI S EGG Q+ VPPGK+ + G S+ L+L +
Sbjct: 53 HFGAQKGAVKDSRPAINTAITKCS---DEGGGQVTVPPGKYFIKGPIIFKSNVNLYLSEG 109
Query: 116 AVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE- 173
A L+ S DEK++ LP+ R TE YS LI+ + ++ ITG G ++GQG
Sbjct: 110 AELIFSHDEKDY-----LPAVLTRWEGTEVFNYSPLIYAYQVENIAITG-KGILNGQGSK 163
Query: 174 -------------------------LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
++ R F GE RP IE + +NI I + +I
Sbjct: 164 NIANWKPEQKKDQALIRKMGREGAPVYNRLF--GEKHKLRPAFIEPLNCRNILIEGVRII 221
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
++ W +HP+ ++V V+ ++I + + N+DG +P+S TN +E+C+ +GDD +A+KS
Sbjct: 222 DATFWVIHPIGCNNVTVRNVSIDS--FNANSDGFDPESTTNALVENCHFRTGDDGIAIKS 279
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G DQ G G PT+ +I+R T S S V +GSE+SGG+++V E+I + + +
Sbjct: 280 GRDQDGWRIGQPTENIIVRNSTFESLASGV-CIGSEISGGVRNVFIENIKIPKASNAIYF 338
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
K+ + RGG++++ ++R + M ++ A Y S NY + + E
Sbjct: 339 KSNLDRGGYMENTWIRNVNMDSVGTAIRFDPDYKSESKENYATR---------FNNFTIE 389
Query: 389 NVTMA-ARLEGIAGDPFTGICISNVTIE 415
N+ A A GI + F + I+NV ++
Sbjct: 390 NINCAYASRSGIEVNGFKDMPITNVALK 417
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 190/422 (45%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAIKVV---HDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G DT R S I N ++ ITG G DG
Sbjct: 113 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ S+I+ + + P S
Sbjct: 227 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 406 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 413 TI 414
+
Sbjct: 466 VV 467
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 190/422 (45%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINKAIKVV---HDKGGGKVIIPEGLWLTGPIVLQSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G DT R S I N ++ ITG G DG
Sbjct: 113 HAEKNALIVFSGDTSLYPIIT---TSFEGLDTR--RCQSPISAMNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGNVDENGKVWYPNEGALKASVLMSGQGNQQAEITS 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ S+I+ + + P S
Sbjct: 227 EEWEEMKSWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 406 ADLYYAAKSAPGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 413 TI 414
+
Sbjct: 466 VV 467
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S S+ EFG V DG T NT+AF AI ++ +GG ++ VP G WLTG L S+ L
Sbjct: 57 YSRSITEFGAVADGITLNTEAFDKAIKAVAE---KGGGKVIVPAGLWLTGPIVLQSNINL 113
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+L ++A++L + D ++P+++ + G +T R S I N ++ ITG G +DG
Sbjct: 114 YLEENALVLFTADHTQYPIVK---TSFEGLETR--RCQSPISALNAENLAITG-KGVMDG 167
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+K G +K
Sbjct: 168 NGDTWRPVKKGKMTANQWKKLVDSGGVLDESGRIWYPSEGSIKGAMACKNFNVPEGINTD 227
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ + + + + +T NSPSW +HP+ + + I++ P S
Sbjct: 228 EEWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQ 287
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC I++ +GDD + +KSG D+ G G P + +IIR +
Sbjct: 288 NGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGG 347
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK-----DVYVRRMTMKTMK 352
+ +GSEMSGG++++ ++ T + ++ G+R K+ GRGG V+ ++ + + + +
Sbjct: 348 FV-VGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLI 406
Query: 353 WAFWITGSYGSHPDNNYDP---------HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ + G D +P P ++I +++ A+NV A G+ P
Sbjct: 407 FDLFYGGKAPGEGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMP 466
Query: 404 FTGICISNVTI 414
I I NVT+
Sbjct: 467 IKNIHIENVTM 477
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 196/428 (45%), Gaps = 61/428 (14%)
Query: 37 NSDWFEYSAI-------SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
++DW + I A + + ++G VGDG+T A +AA+ + R GG +
Sbjct: 31 STDWHHAAEIVRSIDEPDIPARTVDVTDYGAVGDGSTDARPAIEAALADMER---AGGGR 87
Query: 90 LFVPPGKWLT-GSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRY 147
+ +PPG W + G L SH L + A L S+D ++ PV+ PS G + G Y
Sbjct: 88 VVLPPGTWFSAGPIRLRSHVDLHVSSGATLRFSEDPADYLPVV---PSRWEGTEMFG--Y 142
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGE---LWWRKFRA---------------------GE 183
S L+ + DV +TG G IDG E WR+ + GE
Sbjct: 143 SPLLHAHRVHDVAVTG-GGLIDGNAEDGFAAWRELQGEDQQALRRMGKEGVPVEERVFGE 201
Query: 184 LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
Y RP +++ S ++ + +T++++P W H +YS + V+ +T+ PN DG+
Sbjct: 202 GHYLRPSMLQFYESSDVLVEGVTIVDAPMWVNHFIYSDDITVRDVTV--KTHRPNNDGVA 259
Query: 244 PDSCTNTRIEDC-YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
DS ++ +E+ + GDDCV VKSG D+ G G P++ +++R +S A+G
Sbjct: 260 IDSSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRG-NRMSGTEGGFAIG 318
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SEMSGG+ V E T S + IK + RGG V+ V +R +T+ T + Y
Sbjct: 319 SEMSGGVNTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYS 378
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENV------TMAARLEGIAGDPFTGICISNVTIEL 416
+ N+ P +RD V ENV A G+ P + + + ++
Sbjct: 379 GYQGGNHPP---------AFRDFVVENVRAGIVSDAAITAVGVPSSPVRDVTVRRMWVDQ 429
Query: 417 TNKPKKLQ 424
P +L+
Sbjct: 430 ARIPLELK 437
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+L +FG VG+G T AF AID L+ +GG L VP G W TG L S+ L
Sbjct: 48 RKVNLADFGAVGNGEELCTAAFAKAIDTLA---EKGGGHLIVPAGVWFTGPIVLKSNIDL 104
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K AV+L S D +P++E + G DT R S + G NL +V ITG+ G IDG
Sbjct: 105 HLEKGAVILFSPDVDLYPLVE---TVFEGLDTR--RCQSPVSGRNLENVAITGE-GAIDG 158
Query: 171 QGELW------------WRK--FRAGELK------------------------------- 185
G W W++ R G K
Sbjct: 159 NGHYWRPLKREKVTEGVWKQTIARGGVYKRPTYWFPYPQTLKGDTISNMNVPQNLKTEEE 218
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP ++ ++ +N+ + + NSP+WN+HP+ +V+++ + + P + N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNG 278
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DG++ +SC N I + GDD + +KSG D+ G G + +++ T +
Sbjct: 279 DGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFV 338
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG+++V + + ++ G+R K+ GRGG V+++++R + M
Sbjct: 339 -VGSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGVWLTGPIELLSNVN 103
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-HGTFD 157
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 396
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 397 LFDLFYGGKGAGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 457 EMPISNITVKNVVM 470
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 182/418 (43%), Gaps = 79/418 (18%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++G V G SNT+A AAI S EGG + VP G WLTG + +
Sbjct: 19 REAQYDIRDYGAVAGGRVSNTEAINAAIRTCSE---EGGGHVIVPSGLWLTGPVRILTGV 75
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG---RYSSLIFGTNLTDVVITGDN 165
L + AVL+ ++ +E+P+I D EG R S I + +V ITG+
Sbjct: 76 DLHVENGAVLMFDKNREEYPLIIS--------DYEGQPRIRTVSPIMAADAQNVAITGE- 126
Query: 166 GTIDGQGELW------------WRKFRA---------------------------GE--- 183
GTIDG GELW W KF A GE
Sbjct: 127 GTIDGNGELWRPLKKFKVTQRQWDKFVATSPDTVIPTNEGGMWFPTVTSYDGCMEGEPSL 186
Query: 184 ------------LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
+ RP ++ + + I +TL NSP+WNVHP+ +++ V I
Sbjct: 187 DDPDALKKAERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIK 246
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
P + N DGI+ +SC I + GDD + +KSG ++ G PTK + I T
Sbjct: 247 NPYYAQNGDGIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTV 306
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-- 349
+ + +GSEMS G+ +V ++ + ++ G+R K+ +GRGG V+++ + + M
Sbjct: 307 MHAHGGFV-VGSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINMTGI 365
Query: 350 -------TMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
TM ++ + D +PV +N+N +++ A + EGIA
Sbjct: 366 VGEAIIFTMGYSLYKLEHEKKDEDVFVSTEDIPVFRNVNMKNITCVGAKTAFKAEGIA 423
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++ +FG GDG T NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 56 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLSNVN 112
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I P+ G +T R S I N ++ ITG G D
Sbjct: 113 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 166
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W K AG LK
Sbjct: 167 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 226
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + S+ I + +T NSPSW +HP+ V I ++ P S
Sbjct: 227 DEEWNEIRAWLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 186/410 (45%), Gaps = 45/410 (10%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
F + SC + S+ +FG GDG + +T + + AI+ L +L+ P G +LT
Sbjct: 68 FRTAKESC---AVSVRDFGAKGDGFSDDTVSIQTAINCLPN-----NGRLYFPEGVYLTA 119
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGR----GRDTEGG--------RYS 148
L SH TL + + A LL D+ + VI P + G D G +
Sbjct: 120 PIVLKSHITLDISEKAKLLGLPDQSAYNVI---PGTAKDIITGEDIHFGTWEGNAVPMHQ 176
Query: 149 SLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
+LIF D+ I G G IDG E WW + E RP L+ + I + +T
Sbjct: 177 ALIFAEYAEDIRIVG-RGVIDGNAEAGGWWENVK--ERNIPRPRLLFFNRCKLITVHGIT 233
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
+ N+ SW +HP +SS + + I AP SPNTD ++P++C N I C GDDC+A+
Sbjct: 234 VCNAASWQIHPYFSSYLHFLDLDITAPKDSPNTDALDPEACDNVWISGCRFSVGDDCIAI 293
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESG 325
KSG G + P + IR C+ F + LGSEM+GG++++ E ++ G
Sbjct: 294 KSGKIDIGRKFKQPAENHNIR--NCLMQFGHGAVTLGSEMAGGVRNLTVERCIFDHTDRG 351
Query: 326 VRIKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH-----ALPV-- 376
+RIKT GRG + V +M M + I Y + Y + LPV
Sbjct: 352 LRIKTRRGRGKDAVIDGVLFEKMKMNGVLTPIVINMWYNCCDPDRYSEYNTTREKLPVDD 411
Query: 377 ----IQNINYRDMVAENVTMAA-RLEGIAGDPFTGICISNVTIELTNKPK 421
+ +RDM + ++AA +G+ P + I + ++ + +
Sbjct: 412 RTPYLGKFTFRDMECLDCSVAACYCDGLPEMPISEINVEDIHFTFADDAR 461
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---HGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 114 LYTKQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-HGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 406
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 407 LFDLFYGGKGAGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 467 EMPISNITVKNVVM 480
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 166/343 (48%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I+ + G +T R S I N ++ ITG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIID---TSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 197/431 (45%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
HS S+ EFG V DG T NT+AF ID +S+ +GG + VP G WLTG L S+ L
Sbjct: 57 HSRSITEFGAVADGITLNTEAFAQTIDAVSQ---QGGGTVVVPAGLWLTGPIVLKSNINL 113
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L ++A++L + D ++P+I+ + G +T R S + ++ ITG G +DG
Sbjct: 114 HLEENALVLFTADHTQYPIIK---TSFEGLETR--RCQSPVSANGAENIAITG-KGVMDG 167
Query: 171 QGELW------------WRKFRA----------------GELK----------------- 185
G+ W W K A G +K
Sbjct: 168 NGDTWRPVKKGKMTASQWNKLVASGGVLNEKGDIWYPSEGSIKGANACKDFNVPEGIETE 227
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ + + + + +T NSPSW +HP+ + V I++ P S
Sbjct: 228 EDWNSIRDWLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQ 287
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC + + +GDD + +KSG D+ G G P + +IIR +
Sbjct: 288 NGDALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGHGG 347
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG++++ ++ T + ++ G+R K+ GRGG V+++++ + M + I
Sbjct: 348 FV-VGSEMSGGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALI 406
Query: 358 TGSY--GSHPDNNYDPHA------------LPVIQNINYRDMVAENVTMAARLEGIAGDP 403
+ G+ P P A P ++I +++ A+NV A G+ P
Sbjct: 407 FDLFYGGNAPGEGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMP 466
Query: 404 FTGICISNVTI 414
I + NVTI
Sbjct: 467 IKNIFLENVTI 477
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++ +FG GDG T NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 46 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLSNVN 102
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I P+ G DT R S I + ++ ITG G D
Sbjct: 103 LYTERNALVLFTGDFEAYPII---PTSFEGLDTR--RCQSPISARDAENIAITG-YGIFD 156
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W K AG LK
Sbjct: 157 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDAQERIWYPTAGSLKGAMACKDFNVPEGINT 216
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + S+ + + +T NSPSW +HP+ + V I ++ P S
Sbjct: 217 DEEWNEIRAWLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYS 276
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 277 QNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 336
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 337 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++ +FG GDG T NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 56 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLSNVN 112
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I P+ G +T R S I N ++ ITG G D
Sbjct: 113 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 166
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W K AG LK
Sbjct: 167 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 226
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + S+ I + +T NSPSW +HP+ V I ++ P S
Sbjct: 227 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 286
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++ +FG GDG T NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 53 AYEVNISKFGAKGDGMTLNTKAINDAIKEVNQ---RGGGKVIIPEGTWLTGPIELLSNVN 109
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I P+ G +T R S I N ++ ITG G D
Sbjct: 110 LYTERNALILFTGDFEAYPII---PTSFEGLETR--RCQSPISARNAENIAITG-YGIFD 163
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W K AG LK
Sbjct: 164 GNGDCWRPVKKEKLTASQWNKLVKSGGVLDEQERIWYPTAGSLKGAMACKDFNVPEGINT 223
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + S+ I + +T NSPSW +HP+ V I ++ P S
Sbjct: 224 DEEWNEIRAWLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYS 283
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 284 QNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHG 343
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 344 GFV-VGSEMSGGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---HGGGKVIIPEGIWLTGPIELLSNVN 103
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-HGTFD 157
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVKSGGVLDEKQEVWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 396
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 397 LFDLFYGGKGAGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 457 EMPISNITVKNVVM 470
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 178/385 (46%), Gaps = 62/385 (16%)
Query: 73 KAAIDH-LSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PV 129
K A+D + GG ++ +P G + G + S+ L L K+AV+L S + K++ PV
Sbjct: 64 KPALDKAIEECGKSGGGKIIIPEGVYKCNGPIHFKSNINLHLEKNAVVLFSTNPKDYLPV 123
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWR---------- 177
+ + R E YS LI+G + +V ITG+ G DG E WW+
Sbjct: 124 V-----FTRWEGVECYNYSPLIYGFEVDNVAITGE-GVFDGMASDENWWKWKGRKNPKDD 177
Query: 178 -----------------------KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
K GE Y RP ++ S+NI I +T NSP W
Sbjct: 178 ETQNNPNSRPRLFEMNNQDVPVDKRVFGEGHYLRPNFVQFYKSKNILIEGVTFKNSPMWF 237
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HPV S ++I++ + + PN DG +P+SC N IE CY +GDDC+A+KSG + G
Sbjct: 238 LHPVLSENIIIRNVKTIG--HGPNNDGCDPESCKNVLIEGCYFDNGDDCIAIKSGRNNDG 295
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAV 332
P++ +IIR T V+ +GSE+SGG + V AE+ + + + + +RIK+
Sbjct: 296 RRINAPSENIIIRNCTMKDGHGGVV-IGSEISGGCRFVFAEECKMDSPNLDRMLRIKSNT 354
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL------PVIQNINYRDMV 386
RGG V+ VYVR + + + A + YDP + P +NI ++
Sbjct: 355 VRGGVVEHVYVRNIEVGEVSNAIVRMNMF-------YDPKEIGPRDFPPKFRNIRVENVT 407
Query: 387 AENVTMAARLEGIAGDPFTGICISN 411
+ A G+ P + I N
Sbjct: 408 SRKSDYALEFLGLEESPIENVEIIN 432
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 169/349 (48%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ +FG GDGTT NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVSILQFGAKGDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A+++ + D +P++E + G +T R S I N ++ ITG +G DG
Sbjct: 113 YTEKNALVVFTDDFNAYPILE---TSFEGLNTR--RCQSPISARNTENIAITG-HGVFDG 166
Query: 171 QGELW------------WRKF--------------RAGELK------------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKSKLTASQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 226
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV 346
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 -VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 197/406 (48%), Gaps = 51/406 (12%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
RA ++G GDG T+NT A ++AID ++ GG+ +F G +LTGS L S
Sbjct: 20 ARAAEFRANDYGAKGDGVTANTVAIQSAIDAAAK---TGGTIVFAS-GVYLTGSIFLKSG 75
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
L + K + QD+ +PV +P+ G E ++LI ++V I+G G
Sbjct: 76 TRLRVDKGVEIRGMQDQAAYPV---MPTRIAG--IEMKWPAALINVYEQSNVKISG-QGV 129
Query: 168 IDGQGELWWRKFR-------------AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
IDG G++WW K+ A + RP LI+I S N+++ LTL S W
Sbjct: 130 IDGDGKMWWDKYWQVRKDYEPKGLRWAADYDTPRPRLIQIYKSDNVELQGLTLRRSGFWT 189
Query: 215 VHPVYSSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
VH YS V V G+TI + P+TDGI+ DS ++ +++ I DD + +K+G D
Sbjct: 190 VHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDA 249
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID-SESGVRIKTA 331
G+ PT+ ++I +T + +A I GSE SGGI+ V A I + S G+ K+A
Sbjct: 250 DGLRVNRPTENVVIHDVT-VRDGAAGITFGSETSGGIRHVEAYRIHVLAPSPIGILFKSA 308
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------------------P 371
RGG V+D+ + + M+ + AF + ++ +P+ +Y P
Sbjct: 309 ATRGGTVEDISIHDIDMRNVPTAFSV--NFNWNPNYSYAKIPQGLQNVPDYYKVMTQEVP 366
Query: 372 HA--LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
A LP ++NI ++ A T A + A P G+ N+ I+
Sbjct: 367 RAQGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQGVTFRNIDIQ 412
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 87/440 (19%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ +G DG T NTKA AI+ + GG + VP G WLTG L ++
Sbjct: 267 RKDTFNICRYGAKADGLTVNTKAISQAIEAC---HAAGGGTVLVPAGLWLTGPIVLKNNV 323
Query: 109 TLFLHKDAVLLASQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
L + K+A+L S++ ++P++ E SY R + I+G +LT++ ITG+
Sbjct: 324 NLHIAKNALLQFSRNHDDYPIVITTWEGQESY---------RCQAPIWGVDLTNIGITGE 374
Query: 165 NGTIDGQGEL-------------WWRKFRAG----------------------------- 182
G +DG GE+ W R+G
Sbjct: 375 -GVLDGGGEVWRAIKRDKQTNTQWANLLRSGGVVSEKGDLWYPSEKSKKGNNLPNAGRIL 433
Query: 183 --------ELK----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
EL+ + RP +I + +N+ + +T NSP+W +HP+ V ++ +T+
Sbjct: 434 NGIHPTPTELESYKDFLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTV 493
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
+ N+D ++ +SC N +E C +GDD + +KSG D+ G G+PT+ II+
Sbjct: 494 KNHWYAQNSDALDLESCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK 553
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
+ +GSEMSGG++++ + T + S+ G+R KTA GRGG V+D+YV + M
Sbjct: 554 VYHAHGGFV-IGSEMSGGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTE 612
Query: 351 MKWAFWITGSYGSHPD---NNYDPHALPVI------------QNINYRDMVAENVTMAAR 395
+ + Y + D + + LP I +N ++++ A
Sbjct: 613 IPGEAILFDMYYAAKDPVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAIL 672
Query: 396 LEGIAGDPFTGICISNVTIE 415
+ G+ I + N IE
Sbjct: 673 VRGLPEMSIKNINVENAVIE 692
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 189/377 (50%), Gaps = 33/377 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG+T T + + A+D R GG ++ +P G++LTG +L S TL L
Sbjct: 51 NVRDFGATGDGSTLETASLQQALD---RCNVLGGGEVLIPAGRYLTGGLSLRSRVTLRLD 107
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
KDA LL S D +PV + G+ G Y++L+ + ++ I G+ G I+G
Sbjct: 108 KDATLLGSPDLAHYPVAQ---VRWEGKWIPG--YTALLHALDARNIAIVGE-GKIEGNEA 161
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ R + L+ RP L+E + + + ++ + W++HP +++ + +TI +
Sbjct: 162 VAGRPTKDNPLR--RPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTIRS- 218
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
T N DGI+ DSC + I+ C I SGDDC+++KSG + PT+ + I T
Sbjct: 219 -TKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTLEG 277
Query: 294 PFSAVIALGSEMSGGIQDVRAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
A + +G+E S GI++V E IT++ + + IK+ +GRG F++++ VR M M
Sbjct: 278 RGFACLGIGTESSAGIRNVIIEHCHITSV-YKYAIYIKSRIGRGAFIENLTVRDMDAARM 336
Query: 352 KWAFW-ITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMAAR------------- 395
+ F I + D + P LP+ +N + ++ ++ +
Sbjct: 337 RMGFLRIDQTNAGIQDADPVPGLEGLPLFRNFRFENIRVQDAPVLVEAINTDSGKMLDGL 396
Query: 396 -LEGIAGDPFTGICISN 411
L+GI+G GI I+N
Sbjct: 397 VLQGISGTCAKGISIAN 413
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 173/347 (49%), Gaps = 54/347 (15%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + S+ +FG DG T NT+A I+ S+ +GG + +P G WLTG L S+
Sbjct: 36 KKDTLSITQFGAKSDGLTLNTEAINKTIEACSK---QGGGVVLIPQGIWLTGPIVLKSNV 92
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L++ + A++ + D+ ++P+IE +Y G+ + R + I GT+L +V ITGD G I
Sbjct: 93 NLYVSRAALIQFTADKTQYPLIE---TYFEGK--KAVRNQAPISGTDLENVAITGD-GVI 146
Query: 169 DGQGELW------------WRKFRA-------------------------------GELK 185
DG G++W W+K A +K
Sbjct: 147 DGNGDIWRMVKKDKVTEGEWKKLTASGGVVTADGRSWYPSEAYMKAETEKGPKTDYAAIK 206
Query: 186 -YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
Y RP ++ + + + + N T NSP WN+H +Y + + G+ + ++ N DG++
Sbjct: 207 DYLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDI 266
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
+SC+ +++ + GDD + +KSG D+ G G ++ + I + +GSE
Sbjct: 267 ESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFV-IGSE 325
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
MSGG D+ + + I ++ G+R KT GRGG V+++Y++ ++M+ +
Sbjct: 326 MSGGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRDI 372
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 189/422 (44%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 56 YQVNICDFGAKSDGVTLNTEAINNAIKVV---HDKGGGKVVIPEGLWLTGPIVLQSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G D + R S I N ++ ITG G DG
Sbjct: 113 HAEKNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 167 AGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITS 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ I + +T NSPSW +HP+ S+ + + + P S
Sbjct: 227 EEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 287 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 347 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 405
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 406 ADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 465
Query: 413 TI 414
+
Sbjct: 466 VV 467
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 197/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLYLNTKAINDAIKEVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVSSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 406
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 407 LFDLFYGGKGAGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 467 EMPISNITVKNVVM 480
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I+ + G +T R S I N ++ +TG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPIID---TSFEGLETR--RCQSPISARNAENIAVTG-YGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKEKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 197/409 (48%), Gaps = 56/409 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ E G +++A + I ++ S GG + VP G++ TG +L S+
Sbjct: 58 YAMSITELGAKPGFENDSSEAIRQTI---AKVVSAGGGTVVVPAGEFYTGPVHLESNINF 114
Query: 111 FLHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
+ K AVL + E+ P + + R TE S LI+ T+V ITG G ++
Sbjct: 115 HIAKGAVLHFYPEPERYKPYV-----FTRWEGTELMGLSPLIYAYKKTNVAITG-KGILE 168
Query: 170 GQG--ELWW------------------RKF-----------------RAGELKYTRPYLI 192
G G + WW +KF R + Y RP I
Sbjct: 169 GGGSEQHWWPWKGPWKKSTWGDDPIENQKFTRDVLREMAEQELPVAQRVFKNNYLRPPFI 228
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ N+ I +T+ NSP W V+PV +V V+ I + PN+DG +P++CT+ I
Sbjct: 229 QPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVRNIHCDS--HGPNSDGCDPEACTDVLI 286
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
E+C +GDDC+A+KSG + G G P + ++I S V+ +GSE+SGG++++
Sbjct: 287 ENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHGGVV-IGSEISGGVRNL 345
Query: 313 RAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
A+ ++++ D + G+RIKT RGG +K++ R + + +K A I Y +
Sbjct: 346 YAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEGDVGKF- 404
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
PV+++IN ++ E+ T A L G P TG+ I N+TI +K
Sbjct: 405 ---TPVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTILKVDK 450
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 165/343 (48%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 103
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 157
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 29/357 (8%)
Query: 89 QLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG---- 144
+ F+P G + T + L S+ TL L K A LL S + + LP Y + + E
Sbjct: 4 EFFIPKGTYATKTIFLKSNLTLELEKGATLLYSASFESGAI---LPGYTKNSNHEEYYLG 60
Query: 145 -------GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYS 197
+++LI G N+++V + G+ G +DG G + W F RP L +I++S
Sbjct: 61 SWEGNPLDTFTALIQGVNVSNVNLIGE-GVLDGNGSIGWWDFPKVRNVAWRPRLFQIIHS 119
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
++ + +TL NSPSW VHP++S + + I+ P SPNTDG++P+SC I +
Sbjct: 120 HHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESCHRVLILGVHF 179
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
GDDC+A+KSG G ++ + IR + AV+ +GSEM+GG++ + E
Sbjct: 180 SVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGAVV-IGSEMAGGVKHILVEQC 238
Query: 318 TAIDSESGVRIKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----P 371
+++ G+RIKT GRG V+DV R + M+ + + Y PD + +
Sbjct: 239 LFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKVLTPLVVNCFYFCDPDGHSEYVKTK 298
Query: 372 HALPV-IQNINYRDMVAENVT------MAARLEGIAGDPFTGICISNVTIELTNKPK 421
LPV + + RD E++ AA G+ P + + + T + +
Sbjct: 299 ETLPVDYRTPDIRDFCFEDIKCRHSEIAAAYFYGLPEKPIERLSLKDCVFHFTTEAE 355
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 165/343 (48%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 170/369 (46%), Gaps = 48/369 (13%)
Query: 84 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE 143
S G ++ +P G W TG L S T L + + L+ DE + +P Y R
Sbjct: 31 SRHGGEVLIPSGTWHTGPVTLASGITFRLAEGSRLVFIPDEDLY-----VPVYSRWEGVS 85
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW---RKFRAGELK--------------- 185
+F + DV +TG G IDG G+ WW R+ RA +K
Sbjct: 86 CWCMHPCLFISESHDVTVTG-TGVIDGSGKSWWESARRKRALHMKPETPMEKKLAALNPG 144
Query: 186 --------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
+ RP L++I+ S + + +TL SP W +HPV+SS + + + I+
Sbjct: 145 YADQPGGGGGRQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKII 204
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
P +PNTDGI+ DSC + + C + GDD +A+KSG GIA G PT+ + + T
Sbjct: 205 NPADAPNTDGIDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTV 264
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
S ++ +GSE + GI + AED ++ G+RIKT GRGG + D+ R+TM+
Sbjct: 265 RSAHGGIV-IGSETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNN 323
Query: 352 KWAFWITGSY------GSHPDNNYDP--HALPVIQNINYRDMVAENVTMAAR-LEGIAGD 402
I Y GS + +P P I NI RD VA +A + G+
Sbjct: 324 LCPLAINMYYRCGTTEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPER 383
Query: 403 PFTGICISN 411
P T + + +
Sbjct: 384 PITELVVED 392
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 192/403 (47%), Gaps = 48/403 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHKD 115
+FG VGDG T + A AA ++ ++GG ++ +P G W + G +L SH L +
Sbjct: 60 DFGAVGDGRTDSHDAITAA---IAAAHTDGGGRVVLPEGTWRSDGPLHLESHIELHVSDG 116
Query: 116 AVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE- 173
A L+ D ++ LP+ + R TE YS LI+ ++ DV ITG NG IDG +
Sbjct: 117 AHLIFGPDPADY-----LPAVHTRWEGTEMYGYSPLIYAHDVHDVAITG-NGVIDGNPDS 170
Query: 174 -------------------------LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
L R+F GE + RP +I+I ++ + +++ T+
Sbjct: 171 EFHTWTDKQDADVQALRRMGFDGVPLEQRQF--GEGHHLRPSMIQIFDAERVLLADYTVR 228
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP W H VY+ +V+G+T+ + +PN DG++ DS T+ IE +GDD V VKS
Sbjct: 229 NSPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDVDSSTDVLIEHNTFRTGDDSVVVKS 286
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G D+ G G P++ +++R IALGSEMSGGI V D T + +R
Sbjct: 287 GRDKDGRDIGRPSRNVVVRHNDMGGEDG--IALGSEMSGGISHVYFTDNTLRSGAAAIRF 344
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
K + RGG V+ + VR + + + W Y ++ PV ++I + D
Sbjct: 345 KGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGDF----PPVYRDIVFSDFTVT 400
Query: 389 NVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
+ + G P + + N+T+ T+ P L N D+T
Sbjct: 401 SADTLLEIHGPDAAPLRDVTLRNITVAHTDTPMILD-NVEDLT 442
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 205/447 (45%), Gaps = 71/447 (15%)
Query: 40 WFEYSAISCRAHSAS-------LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFV 92
W +Y A+ R + + +FG D T A +AAID GG ++ V
Sbjct: 428 WSDYEAVLARIQPPTFPDRDFPITDFGAKPDADC--TDAIRAAIDAC---HQAGGGRVVV 482
Query: 93 PPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIF 152
P G+WLTG+ +L S+ L + K A L D ++P++ + R E +S I+
Sbjct: 483 PAGEWLTGAIHLRSNVNLHVAKGATLRWVFDLAKYPIV-----FTRWEGVECMNFSPFIY 537
Query: 153 GTNLTDVVITGDNGTIDGQGE--LWW------------------RKFRAGELK------- 185
++ ITG+ GT+DG + WW R + GE
Sbjct: 538 AWEQENIAITGE-GTLDGGSDWSTWWGWNDKRDGTAPKQRAARNRLIQMGETNVPVAERV 596
Query: 186 -----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
+ RP ++ +NI I +++I SP W +HPV S ++ V+ + I + PN D
Sbjct: 597 FGANDFLRPNFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNND 654
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
G +P+SC + +ED +GDDC+A+KSG + G +PT+ ++IRR V+
Sbjct: 655 GFDPESCRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHGGVV- 713
Query: 301 LGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA---- 354
LGSE +GGI+++ ED + + D + G+R K RGG +++V++R + + + A
Sbjct: 714 LGSECTGGIRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLENVFMRNVKIGRVGEAVLTI 773
Query: 355 --FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
+ G+ G+ P+++N+ ++ + + G G I ISN
Sbjct: 774 DLLYEEGAKGAFK---------PIVRNVQMENITSSASPRVMYIRGFPGAVIEDIRISNS 824
Query: 413 TIELTNKPKKLQWNCTDITGISSGVTP 439
T + + +Q T IT + +TP
Sbjct: 825 TFNSVTETEVVQHAGT-ITLKNVTITP 850
>gi|414864495|tpg|DAA43052.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 216
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 88/121 (72%)
Query: 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102
Y+ CR H A + E+G VGDG T NT AF A+ L+R +GG+ L VPPGKWLTG F
Sbjct: 35 YAGPGCRKHVARVTEYGAVGDGRTLNTAAFARAVADLARRAPDGGAALVVPPGKWLTGPF 94
Query: 103 NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
NLTS FTL+L + A +LASQD K WP+I PLPSYGRGRD G RYS+ I G+NLTDV+IT
Sbjct: 95 NLTSCFTLYLDEGAEILASQDMKHWPLIAPLPSYGRGRDEPGPRYSNFIGGSNLTDVIIT 154
Query: 163 G 163
G
Sbjct: 155 G 155
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 192/397 (48%), Gaps = 34/397 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V DG T NT +AA+ + G ++VP G++ T S + S+ TL+L K AV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 118 LLASQDEKEWPVIE-PLPSYGRGRDT-----EGG---RYSSLIFGTNLTDVVITGDNGTI 168
LL D +P++ LPS + EG ++ L+ T + DVV+TG+ GT+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 169 D--GQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
D Q WW + + + RP + + S+N+ + +T+ NS SW +HP++ + +
Sbjct: 201 DCDAQNGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSFSWTIHPIFVKHLDLL 259
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ + +I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVI 319
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVR 344
R + I +GSEMSGG++D+ ++ G+R+KT GRG + + R
Sbjct: 320 RN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 378
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPH-----ALPV------IQNINYRDMVAENVTMA 393
+ M+ +K F I Y PD + P+ A+PV + ++ ++VA + A
Sbjct: 379 NVEMRGVKAPFVINMFYFCDPD-GHGPYVQCREAMPVDEYTPKLGSLTMENIVATDAQFA 437
Query: 394 A-RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
+G+ P + + +V+I K+ Q D
Sbjct: 438 GCYFDGLPEQPIERVTMRDVSITFDPNAKEGQAAMAD 474
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGVWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-HGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG L+
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 406
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 407 LFDLFYGGKGAGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 467 EMPISNITVKNVVM 480
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 191/397 (48%), Gaps = 42/397 (10%)
Query: 44 SAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFN 103
+A +A + EFG V DG T NT+A +AAID + G ++ VP G ++TG+
Sbjct: 49 AATRPQADRFEITEFGAVADGQTINTEAIQAAIDACT-----AGGKVVVPKGTFVTGAIF 103
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTN-----LTD 158
L S TL++ + VLL S + ++PV++ R E Y+SLI + L
Sbjct: 104 LKSRMTLYIEQGGVLLGSDNPDDYPVMQY-----RWEGREQLCYASLINTKDPAEGRLEQ 158
Query: 159 VVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
++I G+ G ID G + K A E K R + + + + ++T+ SP+W VH +
Sbjct: 159 IIIEGE-GKIDANGMALFHKEMA-EKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLI 216
Query: 219 YSSSVIVQGITILAPVTSP--------NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
Y + V V I I N DG+NPDS ++ I + I S DDC+A+KSG
Sbjct: 217 YCNGVSVNHIEIHTKKDEQGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGR 276
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
++ G G+P++ + I T S F +A GSEMSGG+++VR D D S IK
Sbjct: 277 NEEGRRVGIPSQNIRISNCTFKSGFG--VATGSEMSGGVRNVRISDCRFEDVYSIATIKA 334
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAF----WITGS-----YGSHPDNNYDP-----HALPV 376
GRG +++V V T+ W G+ + SH D + D V
Sbjct: 335 PRGRGAVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSV 394
Query: 377 IQNINYRDMVAE-NVTMAARLEGIAGDPFTGICISNV 412
I+NI+ +++V + + A + G+ P I + NV
Sbjct: 395 IRNIHLKNIVLDTHAGNAVFMAGLPESPLQNIRLENV 431
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 2 GSLKTAKRTQVICII--LLVGIIISLNTNG---VESRKARNSDWFEYSAISCRAHSASLE 56
G L+T K T V+ ++ L +G +E R A + E +A S A +
Sbjct: 47 GDLRTGKTTTVVTLLHDLRPDTRYVFEADGFASLEFRTAPCAGLVEATAFSLTPDIALDD 106
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
E G +N +A + A+ + G L G W L S T L + A
Sbjct: 107 EAG-----ARANARALEEAVAAVP-----AGGTLQFAAGLWTAFPVRLKSDMTFHLAEGA 156
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGR----YSSLIFGTNLTDVVITGDNGTIDGQG 172
VL A WP++ GR + G +++ + ++VI G G +DG G
Sbjct: 157 VLRAPSTRNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSG 215
Query: 173 EL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
+ WW + RP + ++ +N+ + T+ N+PSW VHP ++ G+TI
Sbjct: 216 DRGDWWSWPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTI 275
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DQYGIAYGMPTKQ 283
AP SPNTDG NP+SC N I GDDC+AVK+G D G+ +
Sbjct: 276 SAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRH 335
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
++ R + +GSEMSGG+ DV ED + ++ G+R+KT GRGG V ++ +
Sbjct: 336 CLMER------GHGGLVIGSEMSGGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITM 389
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNN------YDPHAL----PVIQNINYRDMVAENVTMA 393
RR+ + + A Y D + DP + P I I D+ ++ A
Sbjct: 390 RRVLLDGVHTALSANAHYHCDADGHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHA 449
Query: 394 ARL-EGIAGDPFTGICISNVTI 414
A + G+ P I I N+TI
Sbjct: 450 AGVFLGLPEAPIRNIAIRNLTI 471
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 189/422 (44%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG DG T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 50 YQVNICDFGAKSDGVTLNTEAINNAIKVV---HDKGGGKVVIPEGLWLTGPIVLQSNVNL 106
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G D + R S I N ++ ITG G DG
Sbjct: 107 HAEKNALIVFSSDTSLYPIIT---TSFEGLDAK--RCQSPISAMNAENIAITG-YGVFDG 160
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 161 AGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSGDKRTEITS 220
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ I + +T NSPSW +HP+ S+ + + + P S
Sbjct: 221 EEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQ 280
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 281 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGG 340
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 341 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 399
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 400 ADLYYAAKSAPSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 459
Query: 413 TI 414
+
Sbjct: 460 VV 461
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 188/400 (47%), Gaps = 59/400 (14%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +G G TKAF AI + GG ++ V G +L+G +L S+ L + K
Sbjct: 74 IRAYGARAGGAIDATKAFANAIAACH---AAGGGKVLVSGGTYLSGPIHLLSNVNLHVEK 130
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A + D K + LP+ + R E YS LI+ ++ ITG+ GT+DGQ
Sbjct: 131 GARIAFITDPKAY-----LPAVFTRWEGMELMGYSPLIYAYRQENIAITGE-GTLDGQAN 184
Query: 174 --LWW-----------------------------RKFRAG---------ELKYTRPYLIE 193
WW R AG E RP ++
Sbjct: 185 RTTWWPWKGGAWKGGKNWSVPGFPTQDEGREQLQRAMEAGVAPEQRLFAEGANLRPPFVQ 244
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+ + I +T++NSP W ++PV + VIV+G+T + PN+DG +P+SC IE
Sbjct: 245 PYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDS--MGPNSDGCDPESCDRVLIE 302
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCY +GDDC+A+KSG + G P++ ++IR V+ +GSEMSGG+++V
Sbjct: 303 DCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHGGVV-IGSEMSGGVRNVF 361
Query: 314 AE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
E ++ + D E G+RIKT RGG V++ + R +T+ +K A I Y + +
Sbjct: 362 VEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQY---EEGDAGE 418
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
H P+++NI++R + ++ G P + + + N
Sbjct: 419 HT-PIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRN 457
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 196/444 (44%), Gaps = 66/444 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG +GDG + NT+AF AA + S+GG + +P G WLTG L S L
Sbjct: 30 NIADFGAIGDGLSDNTEAFAAA---IEACASQGGGTVLIPAGLWLTGPIRLQSGIRLHAD 86
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A++ S + ++P+I SY R R I+G +L +V ITG G DG GE
Sbjct: 87 AGALVHFSANRDDYPLIRT--SYEGLRTV---RCMPAIYGEDLENVAITG-TGIFDGSGE 140
Query: 174 LW------------WRKF-------------------RAGEL------------------ 184
W W++ ++ L
Sbjct: 141 AWRPVKRMKLTEGQWKQLIQSGGYEEGGVWWPTEQSLKSAALVKSLIAQNVQDPSAFEPA 200
Query: 185 -KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
+ RP L+++ + + T NSP+WNVHP V ++ ++I S N DG++
Sbjct: 201 RDHLRPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLD 260
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
DSC I D GDD + +KSG D G A +PT+ + IR + +GS
Sbjct: 261 LDSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFV-IGS 319
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363
EMSG ++++ D I +++G+R K+ GRGG V+ +Y+R + MK + I SY S
Sbjct: 320 EMSGDVRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYS 379
Query: 364 HPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
+N DP A+ PV ++ + D A ++G+ P I V +LT +
Sbjct: 380 GKNNTDDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRV--QLTAR 437
Query: 420 PKKLQWNCTDITGISSGVTPKPCE 443
N +IT + V P+ E
Sbjct: 438 NGATCTNARNITFRQTKVLPENGE 461
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 197/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKEVNQ---RGGGKVIIPEGIWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V + ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 406
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 407 LFDLFYGGKGAGEESEEDLLNRMKTSIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 466
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 467 EMPISNITVKNVVM 480
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 37/367 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG +T A ++AI ++ +P G++ L L L
Sbjct: 83 NVRDFGAAGDGIKDDTLAIQSAI-----MACPPQGRVLIPAGRYSFVCLFLKDGINLELE 137
Query: 114 KDAVLLASQDEKEWPVIEPLPSY---------GRGRDTEGGRYSSLIFGTNLTDVVITGD 164
K A L A D + +P + Y G + LI G ++ +V I G+
Sbjct: 138 KGAELSAVTDRERFPFYPGMVPYTDQTGDYCLGTWEGDPQKMFCGLITGVHVKNVNIYGE 197
Query: 165 NGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
GT++G E WW + ++ + RP + + +NI + LT+ NSPSW +HP +S+
Sbjct: 198 -GTLNGNASHENWWHNCKEMKIAW-RPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSNH 255
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
+ G+ +LAP S NTDG++P+SC + + GDDC+AVKSG G Y P++
Sbjct: 256 LRFLGLNVLAPKDSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSE 315
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+ IR+ + +V+ +GSE+ G++D+ D D++ G+RIKT GRG +D
Sbjct: 316 HITIRQCSMNDGHGSVV-IGSEIGAGVRDLTVRDCIFKDTDRGLRIKTRRGRG---EDCV 371
Query: 343 VRRMTMKTMKW-----AFWITGSYGSHPDNNYD----PHALPV------IQNINYRDMVA 387
V R+ + ++ F + Y PD + LPV IQ ++++D+ A
Sbjct: 372 VDRVAFENIRMDGVLTPFVVNCFYFCDPDGRTEYVQSKEPLPVDERTPSIQELSFKDIHA 431
Query: 388 ENVTMAA 394
EN AA
Sbjct: 432 ENAHYAA 438
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 190/422 (45%), Gaps = 68/422 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG +G T NT+A AI + +GG ++ +P G WLTG L S+ L
Sbjct: 57 YQVNICDFGAKSNGVTLNTEAINNAIKAV---HDKGGGKVVIPEGLWLTGPIVLQSNVNL 113
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ S D +P+I + G D + R S I N ++ ITG G DG
Sbjct: 114 HAEKNALIVFSSDTSLYPII---TTSFEGLDVK--RCQSPISAMNAENIAITG-YGVFDG 167
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 168 AGDRWRPVKKDKMTDRQWKNLVNSGGKVDENGKVWYPNEGALKASVLMAGSEDKRTEITS 227
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ I + +T NSPSW +HP+ S+I+ + + P S
Sbjct: 228 EEWEDMKSWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQ 287
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I +C+ +GDD + +KSG D+ G G P + +I+R T +
Sbjct: 288 NGDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGG 347
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +GSEMSGG+++V + + I ++ G+R K+A GRGG V+++Y+ + M + I
Sbjct: 348 FV-IGSEMSGGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALI 406
Query: 358 TGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
Y + +P P +NI D+ AA L G+ P I I N+
Sbjct: 407 ADLYYAVKSAPGEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNM 466
Query: 413 TI 414
+
Sbjct: 467 VV 468
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 190/393 (48%), Gaps = 35/393 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG +T + +AAI G ++F G +LT L S+ TL L
Sbjct: 85 NVRDFGANGDGKRIDTFSIQAAI-----ISCPDGGRVFFHEGIYLTYPLFLKSNITLELG 139
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR--------YSSLIFGTNLTDVVITGDN 165
K AVLL +++ + +P++ + D+ G ++SLI G + +V I G+
Sbjct: 140 KGAVLLGAKEREMYPILPGEIDCKKIEDSYLGSWEGEAKEIFASLITGIGVENVNIIGE- 198
Query: 166 GTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
GTIDG WW + + + RP I + +N+ I +T+ NSPSW +HP+ S ++
Sbjct: 199 GTIDGNSSFDTWWHDAKVKRIAW-RPRTIFLNKCKNVLIEGITIKNSPSWTIHPLLSQNL 257
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ I P +PNTDG++P+SC + I GDDC+A+KSG + ++
Sbjct: 258 KFINLNIENPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSEN 317
Query: 284 LIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
L IR C+ + + +GSEMSGG+++V + ++ G+RIKT GRG G + +
Sbjct: 318 LYIR--NCLMEYGHGAVVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDE 375
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV------IQNINYRDMVAENV 390
++ + M + F I Y D + LPV I NI +D+ +
Sbjct: 376 IHASNIKMDKVLTPFTINSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDT 435
Query: 391 TMAA-RLEGIAGDPFTGICISNVTI--ELTNKP 420
+AA + G+ + + N+ I +L KP
Sbjct: 436 QVAAGYMYGLPERKIEKVTMENIYIKFDLNAKP 468
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 191/397 (48%), Gaps = 34/397 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V DG T NT +AA+ + G ++VP G++ T S + S+ TL+L K AV
Sbjct: 87 YGLVADGETDNTVRLQAALSTCPK-----GGTVYVPAGRYRTASLFMKSNTTLYLEKGAV 141
Query: 118 LLASQDEKEWPVIE-PLPSYGRGRDT-----EGG---RYSSLIFGTNLTDVVITGDNGTI 168
LL D +P++ LPS + EG ++ L+ T + DVV+TG+ GT+
Sbjct: 142 LLGDNDRTHYPILPGVLPSENEVDEYYLTGWEGNPLDSFAGLLNITQVHDVVVTGE-GTL 200
Query: 169 DGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQ 226
D E WW + + + RP + + S+N+ + +T+ NS SW +HP++ + +
Sbjct: 201 DCDAENGDWWVNPKVKRIAW-RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLL 259
Query: 227 GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
I P +PNTDGI+P+SC RI I GDDC+A+K+ G+ + +I
Sbjct: 260 NFNINNPYNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVI 319
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVR 344
R + I +GSEMSGG++D+ ++ G+R+KT GRG + + R
Sbjct: 320 RN-CLLDKGHGGIVIGSEMSGGVKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFR 378
Query: 345 RMTMKTMKWAFWITGSYGSHPDNNYDPHA-----LPV------IQNINYRDMVAENVTMA 393
+ M+ +K F I Y PD + P+ LPV + ++ ++VA + A
Sbjct: 379 NVEMRGVKAPFVINMFYFCDPD-GHGPYVQCREPLPVDEYTPKLGSLTMENIVATDAQFA 437
Query: 394 A-RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
+G+ P + + +V+I K+ Q D
Sbjct: 438 GCYFDGLPEQPIERVTMRDVSITFDPNAKEGQAAMAD 474
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 192/402 (47%), Gaps = 59/402 (14%)
Query: 84 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDT 142
+ GG ++ +P G++LTG +L S+ L L + A +L + D+ + PV+ SY
Sbjct: 94 AAGGGRVLIPAGRFLTGPIHLKSNVNLHLEEGAEVLFTTDKSAYLPVVHT--SY---EGM 148
Query: 143 EGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW------------------------ 176
E YS LI+ ++ +TG GT +GQ E WW
Sbjct: 149 EIMNYSPLIYAKGQKNIAVTGK-GTFNGQADKENWWPWCGAERYGHKEGAPKQKDDHNIP 207
Query: 177 --------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
R F GE RP +E + +N+ I +T N+P W +HP+ S
Sbjct: 208 ALFTMIEDGTPVEERIF--GEGHQLRPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKY 265
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V V G+T+ + PN DG +P+ I +C +GDDC+A+KSG + G +P++
Sbjct: 266 VTVDGVTVNS--HGPNNDGCDPEYSKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSE 323
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT--AIDSESGVRIKTAVGRGGFVKD 340
+++ V+ +GSE+S G+++V + T + + + +RIKT RGGFV++
Sbjct: 324 NIVVENCDMKDGHGGVV-MGSEISAGVRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVEN 382
Query: 341 VYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARL-EG 398
VYV+ + + +K A I YG + + +P IQNIN ++ EN L +G
Sbjct: 383 VYVKDIEVGQVKEAVLKINTYYGIY--GKQEGEFIPTIQNINLENVTVENGGKYGLLIQG 440
Query: 399 IAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPK 440
P TGI NVTI+ + P K++ +C I+ ++ + K
Sbjct: 441 REEKPVTGISFKNVTIKNADTPLKVE-HCEPISYTNTTINQK 481
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGVWLTGPIELLSNVN 103
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + + + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 104 LYTEQNALVLFTGNFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-HGTFD 157
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG LK
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLKGAMACKDFNVPEGINT 217
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 396
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 397 LFDLFYGGKGAGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 457 EMPISNITVKNVVM 470
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 170/347 (48%), Gaps = 61/347 (17%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
S+ +FG VGDG T N++AF AID++S +GG ++ VP G WLTG + S+ L +
Sbjct: 63 VSIVDFGAVGDGVTDNSEAFAKAIDYVS---EKGGGRVIVPRGIWLTGPIIMKSNIDLHV 119
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ AV+ S D +++P+IE + G +T R S I NL ++ TG G DG G
Sbjct: 120 QQGAVVRFSPDFEDYPLIETI---FEGLNT--FRCMSPIHAHNLENIAFTG-KGIFDGNG 173
Query: 173 ELW------------WRKF--------------------RAGELK--------------- 185
+ W W+K +AG+ +
Sbjct: 174 DAWRPVKKSKLTESQWKKLVNSGGVLSDDGQIWYPSEKSKAGDSRDNFNVPDLERKEDFE 233
Query: 186 ----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG 241
+ RP ++ I + + + T NSP+WN+HP+ V ++ +T+ P S N DG
Sbjct: 234 KIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDG 293
Query: 242 INPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301
++ +SC N I + GDD + KSG D+ G +PT+ ++++ + +
Sbjct: 294 LDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFV-I 352
Query: 302 GSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
GSEMSGG+++V + T I ++ G+R K+ GRGG V+++Y+ + M
Sbjct: 353 GSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDM 399
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 185/415 (44%), Gaps = 66/415 (15%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G V DG T NTK+ AID S+ GG + +P G W+TG L S+ L + + A
Sbjct: 48 KYGAVADGITLNTKSINNAIDACSK---NGGGVVLIPQGLWMTGPIVLKSNVNLHIDRAA 104
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG---- 172
++ + D+ ++P++E G R S + GTNL ++ ITG G IDG G
Sbjct: 105 MVQMTDDKSQYPLVE-----GNYEGHAAVRNQSPVSGTNLVNIAITG-GGIIDGNGTGVW 158
Query: 173 ---------ELWWRKFRAG---------------------------------------EL 184
E W++ A E
Sbjct: 159 RAIGKDRLTESEWKELVASGGVVSENGKSWYPSQSYAKGNAIKDVSLLKPGKSLSDYEEY 218
Query: 185 K-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGIN 243
K Y RP ++ + + I +S T NSP+W +H + + +Q + + P + N D I+
Sbjct: 219 KDYFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAID 278
Query: 244 PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303
+SC N +E+ +GDD + +KSG D+ G G+PT+ +++R + +GS
Sbjct: 279 VESCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHGGFV-IGS 337
Query: 304 EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-TMKWAFWITGSYG 362
EMSGG +++ D T I ++ G+R KTA GRGG V+++Y++ ++M+ + A Y
Sbjct: 338 EMSGGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRDILHEAILFDMYYM 397
Query: 363 SHPDNNYDPHALPVIQNI--NYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
S + P + +R+ NV GI + I N+ +E
Sbjct: 398 SKAGSTLGLKTFPPVTEATPQFRNFYVSNVACNGAETGIFVRGLPEMSIKNIYLE 452
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 63/351 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ EFG GDG NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVSIVEFGAKGDGIMLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ +A++L + D + +P+I+ + G DT R S I N ++ ITG +G DG
Sbjct: 113 YTEMNALILFTDDFEAYPIIK---TSFEGLDTR--RCQSPISAWNAENIAITG-HGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTSGQWSSLVKSGGVVDESGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +GSEMSGG+++V D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 FV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 198/434 (45%), Gaps = 79/434 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 47 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGVWLTGPIELLSNVN 103
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 104 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISVRNAENIAITG-HGTFD 157
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG L+
Sbjct: 158 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 217
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 277
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 278 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 337
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 338 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVENIYINNINMINIPNEPL 396
Query: 357 I----TGSYGSHPDNNYD------------PHALPVIQNINYRDMVAENVTMAARLEGIA 400
+ G G+ ++ D P +NI+ ++V A G+
Sbjct: 397 LFDLFYGGKGAGEESEEDLLSRMKTAIPPVTEETPAFRNIHISNIVCRGSGRAMFFNGLP 456
Query: 401 GDPFTGICISNVTI 414
P + I + NV +
Sbjct: 457 EMPISNITVKNVVM 470
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 57 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---RGGGKVIIPEGVWLTGPIELLSNVN 113
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG +GT D
Sbjct: 114 LYTEQNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISVRNAENIAITG-HGTFD 167
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K AG L+
Sbjct: 168 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTAGSLRGAMACKDFNVPEGINT 227
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ + + +T NSPSW +HP+ V I ++ P S
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 287
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 288 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 347
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 348 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 42/392 (10%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+A + EFG V DG T NT+A +AAID + G ++ VP G ++TG+ L S
Sbjct: 97 QADRFDITEFGAVADGQTLNTEAIQAAIDACT-----AGGKVVVPKGTFVTGAIFLKSRM 151
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTN-----LTDVVITG 163
TL++ + VLL S + ++PV++ R E Y+SLI + L ++I G
Sbjct: 152 TLYVEQGGVLLGSDNPDDYPVMQY-----RWEGREQLCYASLINTKDPAEGRLEQIIIEG 206
Query: 164 DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+ G ID G + K A E K R + + + + ++T+ SP+W VH +Y + V
Sbjct: 207 E-GKIDANGMALFHKEMA-EKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGV 264
Query: 224 IVQGITILAPVTSP--------NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
V I I N DG+NPDS ++ I + I S DDC+A+KSG ++ G
Sbjct: 265 SVNHIEIHTKKDEHGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGR 324
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G+P++ + I T S F +A GSEMSGG+++VR D D S IK GRG
Sbjct: 325 RVGIPSQNIRISNCTFKSGFG--VATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRG 382
Query: 336 GFVKDVYVRRMTMKTMKWAF----WITGS-----YGSHPDNNYDP-----HALPVIQNIN 381
+++V V T+ W G+ + SH D + D VI+NI+
Sbjct: 383 AVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIH 442
Query: 382 YRDMVAE-NVTMAARLEGIAGDPFTGICISNV 412
+++V + + A + G+ P I + NV
Sbjct: 443 LKNIVLDTHAGNAVFMAGLPESPLQNIRLENV 474
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 171/382 (44%), Gaps = 48/382 (12%)
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
+G +N +A + A+ + G L + G W + L S+ T L + AVL A
Sbjct: 101 EGARANAEALETAVAAVPH-----GGTLRLAAGLWTSFPVRLKSNMTFHLAEGAVLRAPS 155
Query: 123 DEKEWPVIEPLPSYGRGRDTEG---GRYSSL---IFGTNL----TDVVITGDNGTIDGQG 172
K WP+ LP+ RD G G + L F + TD +I G +DG G
Sbjct: 156 SRKAWPI---LPA----RDDAGHMLGSWEGLPDACFAAPVQAIGTDNLIIEGRGVLDGSG 208
Query: 173 EL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
+ WW + RP + ++ + IQ+ T+ N+ SW +HP +I G+TI
Sbjct: 209 DRGDWWSWPKETRDGARRPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTI 268
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DQYGIAYGMPTKQ 283
AP SPNTDG NP+SC N I GDDC+AVK+G D G+ +
Sbjct: 269 NAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRH 328
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
++ R + +GSEMSGG+ DV ED + ++ G+R+KT GRGG V ++ +
Sbjct: 329 CLMER------GHGGLVIGSEMSGGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAM 382
Query: 344 RRMTMKTMKWAFWITGSYGSHPDNNYD----------PHALPVIQNINYRDMVAENVTMA 393
RR+ + ++ A Y D + + P I I D+ N+ A
Sbjct: 383 RRVLLDGVQTALSANAHYHCDADGHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHA 442
Query: 394 ARL-EGIAGDPFTGICISNVTI 414
A + G+ P + I N+TI
Sbjct: 443 AGVFLGLPEAPIRNVAIRNLTI 464
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 56 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---HGGGKVIIPEGIWLTGPIELLSNVN 112
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 113 LYTERNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 166
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K G LK
Sbjct: 167 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINT 226
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I S+ I + +T NSPSW +HP+ V I ++ P S
Sbjct: 227 DEEWNEIRPWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 198/435 (45%), Gaps = 72/435 (16%)
Query: 32 SRKARNSDWFEYSAISCRAHSASLEE-------FGGVGDGTTSNTKAFKAAIDHLSRFQS 84
S R DW AI S + FG GD T+NT A AI + +
Sbjct: 35 SSPVRGDDWKMADAIKSSIKVPSFPDKTFNIIDFGANGDNKTNNTVAINNAIKSCN---A 91
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
+GG Q+ +P G+++TG+ +L S+ L L + A+L S +++ LP+ + R E
Sbjct: 92 QGGGQVIIPQGQFITGAIHLLSNVNLHLEEGAILSFSTSPEDY-----LPAVFTRWEGLE 146
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGE--LWW------------------------- 176
YS LI+ ++ ITG G ++G WW
Sbjct: 147 MMGYSPLIYAFEQENIAITG-KGILEGNANNTTWWPWKGKHKEAHWELLTDNNGQIIEQK 205
Query: 177 ----RKFRAGELK------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
+ R E Y RP I+ N+ I +T+ NSP W V+PV
Sbjct: 206 TARDKLMRDAEQHIPVEQRIYADGAYLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLC 265
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
+SV V +T + PN+DG +P+SC + I++C +GDDC+A+KSG + G
Sbjct: 266 NSVTVCDVTFSS--HGPNSDGCDPESCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTA 323
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGF 337
++ ++I V+ +GSE+SGG+ +V ++ T +DS E +RIKT RGG
Sbjct: 324 SQNIVIENCHMKEGHGGVV-IGSEISGGVNNVFVQNCT-MDSPHLERAIRIKTNSVRGGL 381
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARL 396
++ + +R + + T+K A I Y +D P++++I ++ +NV + A L
Sbjct: 382 IEHIRIRNIEVGTVKNAIVINFYYEEGDAGQFD----PIVRDIKIDNLHCKNVLSKALYL 437
Query: 397 EGIAGDPFTGICISN 411
G A DP I ++N
Sbjct: 438 NGFARDPIKDITLTN 452
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 62/388 (15%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEY-----SAISCRAHSASLEEFGGVGDGTTSNTKA 71
+L+ ++I+L+ N E A D E+ + + + +FG GDG NT+A
Sbjct: 7 ILIFLLITLSVNAQEMPLASLYDDVEFKMELITEPKFQETEYLITDFGAKGDGQFKNTEA 66
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
F A ++ S+GG + VP G W TG L S+ L L + A++L S ++P++E
Sbjct: 67 FHKA---FAKAFSQGGGTVVVPEGIWYTGPITLKSNINLHLKQGALILFSDQFDDYPLVE 123
Query: 132 PLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------------WRKF 179
SY + R +S I ++ ITG G IDG G W W
Sbjct: 124 T--SY---EGLKSARSTSPINALGAKNIAITG-KGIIDGNGGAWRPVKKSKMTQHQWNAL 177
Query: 180 RA----------------GELK-------------------YTRPYLIEIMYSQNIQISN 204
A LK + RP ++ ++ +NI +
Sbjct: 178 VASGGVLSDNKSVWYPDEAALKGSKSDLSDWTIEQLQTVRSFLRPVMVSLVDCENILLDG 237
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
T NSP+WN+HP+ S ++IV+ +T+ P + N DG++ +SC N + + GDD +
Sbjct: 238 PTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCENVLVYNNTFDVGDDAI 297
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+KSG ++ G MPT+ +II+ T + +GSEMSGG+ + I +++
Sbjct: 298 CIKSGKNEDGRKRNMPTQNVIIKNNTVYHGHGGFV-VGSEMSGGVSKIHISHCNFIGTDT 356
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
G+R K+ GRGG V+ +Y+ + M +K
Sbjct: 357 GLRFKSTRGRGGVVEQIYISHIYMNEIK 384
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 175/375 (46%), Gaps = 55/375 (14%)
Query: 92 VPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSL 150
VP G++LTG+ +L S+ L L K AVL+ S + + LP+ + R E S L
Sbjct: 109 VPQGRFLTGAIHLKSNVNLHLDKGAVLVFSPNPDHY-----LPAVFTRWEGMEMMGLSPL 163
Query: 151 IFGTNLTDVVITGDNGTIDGQGE--LWW-------------------------------- 176
I+ ++ +TG G +DG + WW
Sbjct: 164 IYAYGQRNIAVTG-QGVLDGGADDNTWWPWKGPHPEGHWRQDPIAQTQKAARDKLQQEVL 222
Query: 177 -----RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
R G+ + RP I+ QN+ I +TL+NSP W +HPV SV V+G+T
Sbjct: 223 AGTDPRTRLHGQGSFLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCR 282
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
+ PN DG +P+ C + IE C +GDDC+A+KSG ++ G G + L++R
Sbjct: 283 S--HGPNNDGCDPECCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQM 340
Query: 292 ISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
++ LGSE+SGG+ +V ++ + + + E RIKT RGG ++ + +R + +
Sbjct: 341 KDGHGGLV-LGSEISGGVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVG 399
Query: 350 TMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICI 409
+K A I Y + + LP +++I+ ++V + A L G A P G+ +
Sbjct: 400 EVKDAVSINFFYEEGQEGRF----LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTL 455
Query: 410 SNVTIELTNKPKKLQ 424
SN I+ P L+
Sbjct: 456 SNCRIDKVAAPSVLE 470
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 66/420 (15%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ + +FG DG T NT+A AI +S +GG ++ +P G WLTG L ++ L
Sbjct: 56 YQVDIRDFGAKADGETLNTEAINNAIKAVSE---KGGGKVVIPEGLWLTGPVVLQNNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A++L S D +P++ + G D R S I N ++ ITG +G +DG
Sbjct: 113 HVEKNALVLFSGDADLYPLVR---TSFEGLDML--RCQSPISAMNAENIAITG-HGVLDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W+ G LK
Sbjct: 167 SGDSWRPVKRNKMTDGQWKSLLKSGGVVDESGKVWYPNEGALKASILTGSKEKREISDSE 226
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + G+ + P S N
Sbjct: 227 WEGMKRWLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNG 286
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N + + +GDD + +KSG + G G P + ++++ T + +
Sbjct: 287 DALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGHGGFV 346
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG 359
+GSEMSGG+++V D T I ++ G+R K+ GRGG V++VYV + M + I
Sbjct: 347 -VGSEMSGGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMINIPGDALIAD 405
Query: 360 SYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
Y + D P P +NI+ ++ + A L G+ P + N+ I
Sbjct: 406 LYYAVKDAPGAPVPAVTEETPSFKNIHISNISCKGAGRAMFLNGLPEMPIENFSVRNMRI 465
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 199/408 (48%), Gaps = 56/408 (13%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
+ S+++FG ++ A +AAI ++ S GG + VP G++ TG +L S+ L
Sbjct: 61 TKSIKDFGAKPGKQNDSSMAIRAAIADVA---SAGGGTVLVPAGEFYTGPVHLESNINLH 117
Query: 112 LHKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ + AVL + E+ P + + R TE S LI+ T+V +TG G ++G
Sbjct: 118 IAQGAVLHFYPEPERYKPYV-----FTRWEGTELMGLSPLIYAFEKTNVAVTG-KGILEG 171
Query: 171 QGE--LWW------------------RKFRAGELK-----------------YTRPYLIE 193
G WW +KF L+ Y RP I+
Sbjct: 172 GGSHTHWWPWKGKWKEAEWGDHPVENQKFTRDPLREMAENEVPVAQRVFDDNYLRPPFIQ 231
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+ +N+ I +T+ NSP W V+PV +V VQGI + PN+DG +P++C + I+
Sbjct: 232 PIRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQGIHCES--YGPNSDGCDPEACKDVLIQ 289
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+C +GDDC+A+KSG + G G+ ++ ++I + V+ +GSE+SGG++++
Sbjct: 290 NCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHGGVV-IGSEISGGVRNLY 348
Query: 314 AE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
+ ++++ D + G+RIKT RGG +K++ R + + +K A I Y +
Sbjct: 349 VDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEGDVGKF-- 406
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
PV+++I ++ E+ T A L G P TG+ + N+T +K
Sbjct: 407 --TPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFVKVDK 452
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 192/431 (44%), Gaps = 77/431 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVNILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A+++ S D +P++E + G +T R S I N ++ ITG G DG
Sbjct: 113 YTEKNALIVFSDDFNAYPILE---TSFEGLNTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF--------------RAGELK------------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEE 226
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFV 346
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA----- 354
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+ +Y+ + M +
Sbjct: 347 -VGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHMIDIPHEPLLFD 405
Query: 355 -FWITGSYGSHPDNNYDPH----------ALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
F+ + G + + P +NI+ +++ + A G+ P
Sbjct: 406 LFYGGKAAGEETEEDLKSRMKASIPEVTVETPSFRNIHISNIICKGSGRAMFFNGLPEMP 465
Query: 404 FTGICISNVTI 414
+ + NV I
Sbjct: 466 IRNVTVKNVII 476
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 167/351 (47%), Gaps = 63/351 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVNIIDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVVIPGGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ +A++L + D + +P+IE + G +T R S I N ++ ITG NG DG
Sbjct: 113 YTEMNALILFTDDFEAYPIIE---TSFEGLNTR--RCQSPISAWNAENIAITG-NGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTSSQWNSLVNSGGVVDEAGSIWYPTAGALKGAMATKDFNNPEGIETD 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 NGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +GSEMSGG+++V D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 FV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 168/375 (44%), Gaps = 36/375 (9%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G +N +A + A+ + G L G W L S T L + AVL A
Sbjct: 101 GARANARALEEAVAAVP-----AGGTLRFAAGLWTAFPVRLKSDMTFHLAEGAVLRAPST 155
Query: 124 EKEWPVIEPLPSYGRGRDTEGGR----YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWR 177
WP++ GR + G +++ + ++VI G G +DG G+ WW
Sbjct: 156 RNGWPILPARDETGRMLGSWEGLPDACFAAPVHAIGADNLVIEG-TGVLDGSGDRGDWWS 214
Query: 178 KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP + ++ +N+ + T+ N+PSW VHP ++ G+TI AP SP
Sbjct: 215 WPKETRDGARRPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSP 274
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW-------DQYGIAYGMPTKQLIIRRLT 290
NTDG NP+SC N I GDDC+AVK+G D G+ + ++ R
Sbjct: 275 NTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMER-- 332
Query: 291 CISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350
+ +GSEMSGG+ +V ED + ++ G+R+KT GRGG V +V +RR+ +
Sbjct: 333 ----GHGGLVIGSEMSGGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDG 388
Query: 351 MKWAFWITGSYGSHPDNN------YDP----HALPVIQNINYRDMVAENVTMAARL-EGI 399
++ A Y D + DP + P I I D+ ++ AA + G+
Sbjct: 389 VQTALSANAHYHCDADGHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGL 448
Query: 400 AGDPFTGICISNVTI 414
P I I N+TI
Sbjct: 449 PEAPIRNIAIRNLTI 463
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 72/416 (17%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH-KD 115
++G V D +T+A + AID +S +GG ++ +P G + TG+ L + L L K+
Sbjct: 23 DYGAVADDDKLDTQAIQKAIDEVSE---KGGGKVVIPKGTYDTGAITLKDNVNLCLEDKE 79
Query: 116 AVLLASQD--EKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L +QD +P++ E P Y YS+ I+ + ++ +TG GT+D
Sbjct: 80 TKLQFTQDINHDNYPLVYSHWEGQPMY---------NYSAFIYAKDAVNIALTG-QGTLD 129
Query: 170 GQ---GELW-W--RKFRA-------------------------GELKYTRPYLIEIMYSQ 198
GQ G W W R + GE + RP I+++ +
Sbjct: 130 GQAGDGTPWCWMSRDYMTDYQDDDRTALINMNNDRVPVEERIFGEGHFLRPNFIQVIGCE 189
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258
N+ + +TL+ SP W V+PV ++V V+GI I + N DGI+P+S IED Y
Sbjct: 190 NVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHI--STKAANNDGIDPESSNYVLIEDNYFD 247
Query: 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED-- 316
+GDDC+A+KSG + G A P++ +IIR + I +GSE+SGG+ +V A++
Sbjct: 248 TGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVSGGVNNVFADNNQ 306
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGSHPDNNYD 370
+ + + +R KT RGG ++++Y+R T++++ A + G +G +
Sbjct: 307 FNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEEGRHGDY------ 360
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI-ELTNKPKKLQW 425
+P +NI ++ + +E P TG+ + NV + E+ N + + W
Sbjct: 361 ---MPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENPLRAVNW 413
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 168/342 (49%), Gaps = 40/342 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+F V D T+ +T+A + AID S G + +P G++LTG+ L S TL L KDA
Sbjct: 8 DFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTLELAKDA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
+LL SQ +++P I P+ G D + + + N V +GT DGQG +WW
Sbjct: 63 MLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGAVWW 116
Query: 177 RKF-----RAGEL-KYTR-------------PYLIEIMYSQNIQISNLTLINSPSWNVHP 217
KF +G L YTR P + + S+ + + + T +S WN+H
Sbjct: 117 HKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHV 176
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
YS V +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 177 CYSKQVNLQRLRVMN-ATGPSTDGIDIDSSQLVRVESCTVSCNDDNICVKSGRGAEAQQL 235
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
G + +IIR T + + I LGSE SGGI++V E + G RIK+A RGG+
Sbjct: 236 GRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGW 293
Query: 338 VKDVYVRRMTMKTMKWAFWI------TGSYGSHP-DNNYDPH 372
+K++ VR + M+ + + F + SY P D PH
Sbjct: 294 IKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPPH 335
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 190/407 (46%), Gaps = 65/407 (15%)
Query: 62 GDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLAS 121
GDG T + A + AID +S + GG +++ PG +LTGS L S TL + + L
Sbjct: 14 GDGRTDCSNAIQRAIDTVS---ASGGGKVYFRPGIYLTGSIFLKSGVTLEIGEGVELRGI 70
Query: 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF-- 179
DE +P I + R E + LI +V ITG GTIDGQG WW K+
Sbjct: 71 IDETAYPDI-----WTRVAGIEMEWPAGLINVIGQANVTITG-KGTIDGQGFYWWNKYWG 124
Query: 180 --RAGELK--YT-------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
R G ++ YT RP I I S + + +LTL SP WNVH YS+
Sbjct: 125 EDRLGGMRKEYTGKGLRWAVDYDCKRPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTD 184
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V V G+ ++ P+TDGI+ DS N IE+C I DD + +K+G D G+ P++
Sbjct: 185 VYVSGL-VIKDNEGPSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSE 243
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
+++R C A + +GSE SG I++V I A ++ G RIK+A+ RGG ++++
Sbjct: 244 NIVVR--NCSIGSGAGVTIGSETSGSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIR 301
Query: 343 VRRMTMKTMKWAFWI------TGSYGSHPDN---NYDPH------------ALPVIQNIN 381
V M + F + SY S P+N N H +P ++NI
Sbjct: 302 VHDFEMVNVLRPFIFQLNWNPSYSYASLPENWKGNIPAHWKVLTEHVPEELGIPTVRNIE 361
Query: 382 YRDMVAENV-------------TMAARLEGIAGDPFTGICISNVTIE 415
+VA+++ + A +E P T + NV IE
Sbjct: 362 ISGVVAKSIHEISELSSGKHAESQAMEIEAHPSRPITWVKWKNVYIE 408
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVNILQFGAKGDGITLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A+++ S D +P++E + G +T R S I N ++ ITG G DG
Sbjct: 113 YTEKNALIVFSDDFNAYPILE---TSFEGLNTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF--------------RAGELK------------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKEFNNPEGIETEEE 226
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 286
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFV 346
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 -VGSEMSGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 188/392 (47%), Gaps = 42/392 (10%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+A + EFG V DG T NT+A +AAID + G ++ VP G ++TG+ L S
Sbjct: 97 QADRFDITEFGAVADGQTINTEAIQAAIDACT-----AGGKVVVPKGTFVTGAIFLKSRM 151
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTN-----LTDVVITG 163
TL++ + VLL S + ++PV++ R E Y+SLI + L ++I G
Sbjct: 152 TLYVEQGGVLLGSDNPDDYPVMQY-----RWEGREQLCYASLINTKDPAEGRLEQIIIEG 206
Query: 164 DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+ G ID G + K A E K R + + + + ++T+ SP+W VH +Y + V
Sbjct: 207 E-GKIDANGMALFHKEMA-EKKGFRGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGV 264
Query: 224 IVQGITILAPVTSP--------NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
V + I N DG+NPDS ++ I + I S DDC+A+KSG ++ G
Sbjct: 265 SVNHVEIHTKKDERGRRYEHIFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGR 324
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G+P++ IR CI +A GSEMSGG+++VR D D S IK GRG
Sbjct: 325 RVGIPSQN--IRISNCIFKSGFGVATGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRG 382
Query: 336 GFVKDVYVRRMTMKTMKWAF----WITGS-----YGSHPDNNYDP-----HALPVIQNIN 381
+++V V T+ W G+ + SH D + D VI+NI+
Sbjct: 383 AVIENVTVEDCTLTNYSLEHEDCRWFRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIH 442
Query: 382 YRDMVAE-NVTMAARLEGIAGDPFTGICISNV 412
+++V + + A + G+ P I + NV
Sbjct: 443 LKNIVLDTHAGNAVFMAGLPESPLQNIRLENV 474
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 187/395 (47%), Gaps = 60/395 (15%)
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTE 143
+GG ++ VPPG++ TG+ +L S+ L + + A L SQD ++ P++ + R E
Sbjct: 91 KGGGKVVVPPGEYRTGAIHLRSNIELHVSRGATLRFSQDPADYLPMV-----HTRWEGIE 145
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW------------------------- 176
YS ++ + DV ITG+ G +DGQ E WW
Sbjct: 146 LYNYSPFVYAYGVHDVAITGE-GVLDGQADPEHWWPWKTEPDGHGGVVETEHRNALHAMA 204
Query: 177 --------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
R+F +L RP ++ S I +S +TL NSP W +HPV S +V+V G+
Sbjct: 205 EQGVPVAQRRFADSKL---RPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGV 261
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+ +P PN+DG+NP+S N I + +GDDC+AVKSG + G G+P++ ++I
Sbjct: 262 TLDSP-DGPNSDGVNPESSRNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHD 320
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+ V+ +GSEMSG +++V AE + + + +RIKT RGG V+ VY R
Sbjct: 321 NRMFAGHGGVV-IGSEMSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDN 379
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ + A I Y ++ P ++ I+ ++ + A L G P T
Sbjct: 380 DVPAVADAVIRINFHYEEGDVGDF----TPTVRGIHIDNVHSVGGEFALYLRGYERSPIT 435
Query: 406 GICISNVTIELTNKP------KKLQWNCTDITGIS 434
I I + T P + L ++ I G+S
Sbjct: 436 DITIRDSTFSEATTPMLLEHVRGLTFDNVTINGVS 470
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 183/410 (44%), Gaps = 57/410 (13%)
Query: 71 AFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVI 130
+ + AIDHL++ +G L +P G TG L S T+ L K AVL D +
Sbjct: 15 SIQEAIDHLAK--CDGARVLTIPKGTTETGPLELISDLTIILEKGAVLKFKDDPHLYK-- 70
Query: 131 EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF----------- 179
P + R E L++ + ++ I G+ G IDG G WWR F
Sbjct: 71 ---PIWTRWEGIECHAMHPLLYAADCHNITIDGE-GIIDGNGAWWWRTFAQIERTDRTQP 126
Query: 180 -----------------RAG-----ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
RAG ++ RP LI+ +++ +T+ NSP W +H
Sbjct: 127 QEDYELELARLNPDYKERAGGGARPSTQFLRPPLIQFWKCTAVKLKGITVQNSPFWTIHF 186
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
VY + V + G+T+ P + NTD ++ DS TN + + GDD + +KSG G+
Sbjct: 187 VYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGDDAITLKSGSGPDGLRV 246
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
PT + ++ T ++ IA+GSE +GGI DV E T ++ G+R+K+ GRGG
Sbjct: 247 NKPTAHVNVKDCTILASHGG-IAIGSETAGGINDVNVEKCTFSGTQRGIRLKSRRGRGGT 305
Query: 338 VKDVYVRRMTMKTMKWAFWITGSY---GSHP---DNNYDPHALPV------IQNINYRDM 385
+K + +R + M W + G Y G P D A PV I+NI D+
Sbjct: 306 IKGITLRHLEMDHC-WCPIVLGMYFAPGVLPQEEDYVLSKSAQPVEATTPHIRNIRIEDV 364
Query: 386 VAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ-WNCTDITGI 433
A+NV + AA + G+ P + I L + + ++ W+ G+
Sbjct: 365 RADNVRSTAAFIVGLPESPIENVSIDQFEWHLAPEEELMETWHTEPTKGL 414
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 21/365 (5%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG VGDG T +T A + +D S GG ++FVP G++LTG+ L S+ L L
Sbjct: 58 NVRDFGAVGDGKTKDTLALQQTLDRCSLL---GGGEVFVPAGEYLTGALVLRSNTLLRLD 114
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
DA LL S D ++P+ + GR +G Y I + ++ I G G I G
Sbjct: 115 GDASLLGSPDVADYPLTQ---VRWEGRWIKG--YIGFISAMDAENIGIVG-KGKIVGNTA 168
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ R RA + + P L+E + +N+++ + + W++HP Y ++ + +T+ +
Sbjct: 169 IKGRVERATQFR--NPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITFKNVTVHS- 225
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
DGI+ DSC + I+ C + DDC+++KSG + G PT+ + I T +
Sbjct: 226 ----GADGIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTFMD 281
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSES-GVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
F A I +GSE SGGI++VR + + + + IK+ GRG F++D+ + + + K
Sbjct: 282 HFWACIGIGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEVSGAK 341
Query: 353 WAFWITGSYGSHPDNNY---DPHALPVIQNINYRDMVAENVTMAARLEGI-AGDPFTGIC 408
F S + + +P I+N ++ ++ ++ + GI P G
Sbjct: 342 QGFLRFNILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSKPLEGFS 401
Query: 409 ISNVT 413
++NVT
Sbjct: 402 LTNVT 406
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 176/359 (49%), Gaps = 36/359 (10%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+F V D T+ +T+A + AID S G + +P G++LTG+ L S TL L KDA
Sbjct: 8 DFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTLELAKDA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VLL SQ +++P I P+ G D + + + N V +GT+DGQG +WW
Sbjct: 63 VLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTLDGQGAVWW 116
Query: 177 RKF--------------RAG-----ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
KF R G + RP + + S+ + + + T +S WN+H
Sbjct: 117 HKFWGDDETSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHV 176
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
YS V +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 177 CYSKQVNLQRLRVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQL 235
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
G + +IIR T + + I LGSE SGGI++V E + G RIK+A RGG+
Sbjct: 236 GRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGW 293
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARL 396
+K++ VR + M+ + + F + ++ P +Y Q ++R + A VT A L
Sbjct: 294 IKNIVVRHLKMEDVCYPFMLQLNW--FPQYSYSEQPADTEQPSHWRKL-ASGVTGDAGL 349
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 167/359 (46%), Gaps = 70/359 (19%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + S+ FG + G NT++ AID + +GG + +P G WL+G L S+
Sbjct: 33 KKDTVSITAFGAISGGRHLNTESINQAIDQTHK---KGGGVVLIPAGVWLSGPITLKSNI 89
Query: 109 TLFLHKDAVLLASQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
L L +A+L ++D ++ ++ E +P R S I+ N ++ ITG
Sbjct: 90 NLHLAANALLQFTKDFSQYSLVQTSWEGIPQM---------RNQSPIWALNQQNIAITG- 139
Query: 165 NGTIDGQGELW------------WRKFRAG------------------------------ 182
G IDG G+ W W+K +
Sbjct: 140 KGVIDGNGDAWRMVKKAKMTETQWKKLISSGGVLNEKGDIWYPSQSSLKGASYKDPGLVE 199
Query: 183 ---------ELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILA 232
E+K Y RP +I + + I + +T NS +WN+HP+ S+ + ++ I +
Sbjct: 200 KGKNAQFYEEIKDYLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRN 259
Query: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292
P S N DG++ +SC N +E GDD + +KSG ++ G GMPT+ L +R T
Sbjct: 260 PWYSQNGDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVY 319
Query: 293 SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ +GSEMSGG +++ ++ T I ++ G+R KT GRGG V++VY+ + MK +
Sbjct: 320 HAHGGFV-VGSEMSGGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDI 377
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 95/137 (69%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ +ALGSEMSGGI+ V A+DI +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+VKDVY+ +TMK + TG YG HPD+ YDP+ALP IQ I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 167/351 (47%), Gaps = 63/351 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ ++ +FG GDG NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 56 YTVNIVDFGAKGDGIVLNTKAINDAIKAVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ +A++L + D + +P+I+ + G DT R S I N ++ ITG +G DG
Sbjct: 113 YTEMNALVLFTDDFEAYPIIK---TSFEGLDTR--RCQSPISAWNAENIAITG-HGVFDG 166
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTAGQWSSLVSSGGVVDASGSIWYPTAGALKGAMATKDFNNPEGINTD 226
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S
Sbjct: 227 EEWNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQ 286
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T +
Sbjct: 287 NGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGG 346
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ +GSEMSGG+++V D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 FV-VGSEMSGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 173/356 (48%), Gaps = 24/356 (6%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG + + N +A ++AI + G L +P G W +G L S+ TL + +
Sbjct: 88 IRDFGASTE-SADNARAIQSAIAAIP-----AGGTLRLPAGSWSSGPVFLKSNMTLLIEE 141
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR----YSSLIFGTNLTDVVITGDNGTIDG 170
AVL + + V+ + GR T G ++SLI + ++ ITG GTIDG
Sbjct: 142 GAVLADTGSRQGRKVLPARHADGRVLGTWEGVAEPCFASLINAIDCQNLAITG-QGTIDG 200
Query: 171 QGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
G+ WW + RP I + +++ +S +T+ NSPSW +HPV V+ G+
Sbjct: 201 GGDRGDWWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVLAVGL 260
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
TI SPNTDG+NP++ ++ R+ I GDDC+A+K+G PT+++ IR
Sbjct: 261 TIRNDPLSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRVEIRN 320
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
AV+ +GSEMS GI DV + ++ G+RIKT GRGG V D+++ + M
Sbjct: 321 CLMQLGHGAVV-MGSEMSRGIHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLSQCRM 379
Query: 349 KTMKWAFWITGSYGSHPD------NNYDPHAL----PVIQNINYRDMVAENVTMAA 394
+ + Y D + +P L P I NI RD+V AA
Sbjct: 380 DGVATPIAVNAFYFCDADGRSEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAA 435
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 188/377 (49%), Gaps = 27/377 (7%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + + FG GDGTT +T A + AID + ++ G +L G +L+G +L S+ T
Sbjct: 22 AKTCDVRAFGAKGDGTTKDTVAIQKAIDTCAGYKKGGVVKL--SGGIFLSGPISLKSNIT 79
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L + + A LL S D +++P + ++ R + L+ N ++ ITG GTID
Sbjct: 80 LDIAEGATLLGSPDREDYPKV----TFARQPTVQ-----PLVGSVNAENITITG-GGTID 129
Query: 170 GQGELWWRKFRA----GEL--KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
G G +WW A G L + RP + +S++I++ +T+ N+ W + P Y+ +
Sbjct: 130 GNGHIWWEYVHAVKEAGVLGNDHPRPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDL 189
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ + + ILAP SPNTD I+P S +N I+ + GDD VA+KSG P+K
Sbjct: 190 VFRNLKILAP-HSPNTDAIDPFSSSNIVIDHVFSSVGDDNVAIKSGAIN-SPGPDAPSKN 247
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
+ I C +++GSE++GG+Q+V AE I ++ G+RIK RG V ++
Sbjct: 248 ITIT--DCTFENGHGLSIGSEIAGGVQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISF 305
Query: 344 RRMTMKTMKWAFWITGSY-GSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEG 398
+ + M +K A IT Y + PD + P +I ++ A A + G
Sbjct: 306 KDIDMVDVKTAILITEYYPKAAPDGEVPSMPMGRLTPRFHDIAIENVHATGSGSAGTIVG 365
Query: 399 IAGDPFTGICISNVTIE 415
+ P G+ + NV ++
Sbjct: 366 LPESPVEGLSLKNVDLQ 382
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ +ALGSEMSGGIQ V A+D+ +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+V+DVY+ +TMK + TG YG HPD+ YDP+ALP IQ I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 94/137 (68%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ +ALGSEMSGGIQ V A+D+ +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+V+DVY+ +TMK + TG YG HPD+ YDP+ALP IQ I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ A +EGI PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 203/473 (42%), Gaps = 102/473 (21%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FG DG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A++L S D +P+I + G +T R S I N ++ ITG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 171 QGELW------------WRKFRA---------------------------------GEL- 184
G+ W W+K A GEL
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + T NSPSW +HP+ ++ + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC I + +GDD + +KSG D+ G G P + +I+ T +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG+ ++ ++ T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 357 ITGSY----GSHPDNNYDP-----------HALPVIQNINYRDMVA-------------- 387
I Y G D N D P+ +NI +D+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 388 --------ENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW-NCTDIT 431
EN+ ++ EG+ + + N+ IEL K L+ N +++T
Sbjct: 469 MRIKNINMENIIVSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVT 521
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 40/342 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+F V D T+ +T+A + AID S G + +P G++LTG+ L S TL L KDA
Sbjct: 8 DFAAVPDATSLSTQAIQRAIDSAS-----AGDTVLIPAGRFLTGALFLKSEMTLELAKDA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
+LL SQ +++P I P+ G D + + + N V +GT DGQG +WW
Sbjct: 63 MLLGSQRLEDYPDI---PTRVAGIDMV---WPAAMLNINHCRNVTVCGSGTFDGQGAVWW 116
Query: 177 RKF-----RAGEL-KYTR-------------PYLIEIMYSQNIQISNLTLINSPSWNVHP 217
KF +G L YTR P + + S+ + + + T +S WN+H
Sbjct: 117 HKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNVVVYESECVTLEDFTSQDSGFWNLHV 176
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
YS V +Q + ++ T P+TDGI+ D+ R+E C + DD + VKSG
Sbjct: 177 CYSKQVNLQRLRVMN-ATGPSTDGIDIDTSQLVRVESCTVSCNDDNICVKSGRGAEAQQL 235
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
G + +IIR T + + I LGSE SGGI++V E + G RIK+A RGG+
Sbjct: 236 GRTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGW 293
Query: 338 VKDVYVRRMTMKTMKWAFWI------TGSYGSHP-DNNYDPH 372
+K++ VR + M+ + + F + SY P D PH
Sbjct: 294 IKNIVVRHLKMEDVCYPFMLQLNWFPQYSYSEQPADTKQPPH 335
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 203/473 (42%), Gaps = 102/473 (21%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FG DG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A++L S D +P+I + G +T R S I N ++ ITG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 171 QGELW------------WRKFRA---------------------------------GEL- 184
G+ W W+K A GEL
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLVASGGVVDTDGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + T NSPSW +HP+ ++ + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC I + +GDD + +KSG D+ G G P + +I+ T +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG+ ++ ++ T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 357 ITGSY----GSHPDNNYDP-----------HALPVIQNINYRDMVA-------------- 387
I Y G D N D P+ +NI +D+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 388 --------ENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW-NCTDIT 431
EN+ ++ EG+ + + N+ IEL K L+ N +++T
Sbjct: 469 MRIKNINMENIIVSNAKEGVVLSEADEVNMKNIKIELLKSGKNLKMQNVSNVT 521
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 202/463 (43%), Gaps = 49/463 (10%)
Query: 40 WFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99
W SA + A ++ ++G DG+ T+AF++AI ++ GG ++VP G++++
Sbjct: 12 WIGASAWAA-APVFNIADYGARKDGSALATEAFRSAIQAA---KAAGGGTVYVPAGQYIS 67
Query: 100 GSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
G L S+ L + A L +P S GR + E LI G NL +V
Sbjct: 68 GPIELVSNLVLHIDAGATL-------RFPATRLPFSRGRWQGIEALTPVPLIGGRNLENV 120
Query: 160 VITGDNGTID-------------GQGELWWRKFRAGELK-------YTR------PYLIE 193
ITG G + G G W ELK Y + P I
Sbjct: 121 SITG-RGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFIS 179
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+M S+N+ I + ++ S W + VY + +V G+ ++ +T GI DS N RI
Sbjct: 180 LMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGV-MVETFGGHDTGGIYVDSSRNVRIS 238
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DCYI +GDD + +KSG D G P + + I AV+ LGSE+SG I+++
Sbjct: 239 DCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVV-LGSEISGWIRNLV 297
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
A +IT ++ GVRIKT GRGG ++DV TM+ + I+ Y P+N P
Sbjct: 298 ASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPE 357
Query: 374 LPV------IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNC 427
PV +NI M N + +EGI P G+ IS++ K
Sbjct: 358 EPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIGMKAYNTKA 417
Query: 428 TDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGV 470
++ + P L+ D + E + +R P+E V
Sbjct: 418 MELHNVQLSAKTGPVFLIRD---STDLELDNVGSRRPLEEAPV 457
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 82/452 (18%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
+ + ++++F GDG T NT + AI S +GG + VP G WLTG +L S+
Sbjct: 36 KTDTFNIKQFDAKGDGLTLNTNSINDAITSCSE---KGGGVVLVPGGVWLTGPIDLKSNV 92
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L + +D +LL ++D ++P++E G GR S I G +L ++ ITG G I
Sbjct: 93 NLHIDRDGILLFTKDFNQYPIVE-----GSYEGLPAGRCKSPISGKDLQNIAITG-TGII 146
Query: 169 DGQGELW------------WR-KFRAGEL------------------------------- 184
DG G+ W W+ K +G L
Sbjct: 147 DGNGDAWRMVKKDKLTATQWQDKIASGGLLSADKKTWYPTEKSLKGSQAKDPGILKEGRS 206
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP ++ + + I + +T NSP+WN+HP S + ++G+ + P +
Sbjct: 207 IQDFEVYKDFLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYA 266
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N DGI+ +S TNT IE+ GDD + +KSG D+ G G PT+ +I+R
Sbjct: 267 QNGDGIDLESSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAHG 326
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM----- 351
+ +GSEMSGG +++ + + + ++ G+R KT GRGG V+++YV + MK +
Sbjct: 327 GFV-IGSEMSGGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAEAI 385
Query: 352 --------KWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAG 401
K ++G P P A P ++ + ++V A + G+
Sbjct: 386 LFDMYYMAKDPVALSGEKRDAPKVEVLPVTEATPQFKDFHISNIVCNGAATALFIRGLPE 445
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
G+ ++++ I+ K CT+ TG+
Sbjct: 446 MNILGLYLNDMVIK-----AKKGMVCTEATGV 472
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 63/343 (18%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A+ ++E+FG GDG NTKA AI +++ GG ++ +P G WLTG L S+
Sbjct: 56 AYEVNIEKFGAKGDGLFLNTKAINDAIKDVNQ---HGGGKVIIPEGIWLTGPIELLSNVN 112
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L+ ++A++L + D + +P+I + G +T R S I N ++ ITG GT D
Sbjct: 113 LYTERNALVLFTGDFEAYPII---ATSFEGLETR--RCQSPISARNAENIAITG-YGTFD 166
Query: 170 GQGELW------------WRKF----------------RAGELK---------------- 185
G G+ W W+K G LK
Sbjct: 167 GNGDCWRPVKKGKLTASQWKKLVNSGGVLDEKQEIWYPTPGSLKGAMACKDFNVPEGINT 226
Query: 186 ---------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ I+ S+ I + +T NSPSW +HP+ V I ++ P S
Sbjct: 227 DEEWNEIRPWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYS 286
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D I+ +SC N I + +GDD + +KS D+ G G P + +I++ T +
Sbjct: 287 QNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGHG 346
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ ED T + ++ G+R K+ GRGG V+
Sbjct: 347 GFV-VGSEMSGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 188/433 (43%), Gaps = 79/433 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FG DG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A++L S D +P+I + G +T R S I N ++ ITG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 171 QGELW------------WRKFRA---------------------------------GEL- 184
G+ W W+K A GEL
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + T NSPSW +HP+ ++ + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC I + +GDD + +KSG D+ G G P + +I+ T +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG+ ++ ++ T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 357 ITGSY----GSHPDNNYDP-----------HALPVIQNINYRDMVAENVTMAARLEGIAG 401
I Y G D N D P+ +NI +D+ A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 402 DPFTGICISNVTI 414
I + N+ +
Sbjct: 469 MRIKNINMENIIV 481
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + AVL S D+ + + + G D
Sbjct: 79 GGGTVVVPKGTFHTGPVTLKSNVNFHVEEGAVLKFSTDQSLY--FPAVITRWEGLDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG E WW R
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNETWWSMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + + I ++TL+NSP W +HP++ S+IV+G+
Sbjct: 194 YGETSTPIYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG +Q G + +P++ +I+R
Sbjct: 254 HVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRS 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+ V+ +GSE+SGG +++ E+ + + D + +RIKT+ RGG +++V+VR +
Sbjct: 312 CFMKNGHGGVV-IGSEISGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNV 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + N P ++N++ +++ E + + G+ D
Sbjct: 371 TVGQCREAVLRINLQYENREKCNRG--YAPTVRNVHLKNVTCEKSKLGVLIIGLDDDKH- 427
Query: 406 GICISNVTIE 415
+ NV++E
Sbjct: 428 ---VYNVSVE 434
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 95/137 (69%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ ++LGSEMSGGI+ V A+DI +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+VKDVY+ +TMK + TG YG HPD+ YDP+ALP IQ I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ + A +EGI PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 204/444 (45%), Gaps = 62/444 (13%)
Query: 13 ICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAF 72
+CI L I+ + ES K + S + ++++FG D T +
Sbjct: 27 LCISLFASEPINFDKAFKESVKIEQ----QIKRTSFPGKAYNIKDFGATTD--TPDQPCH 80
Query: 73 KAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEP 132
+ ++ EGG + +P G + TG + S+ L L + A L S D+K +
Sbjct: 81 EQINLAITTCNQEGGGTVVIPKGTFYTGPITMKSNVNLHLEEGATLKFSTDQKLY--FPG 138
Query: 133 LPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-------------- 176
+ + G D R LI+ +++ ITG GTIDGQG E WW
Sbjct: 139 VITRWEGLDCYNAR--PLIYAYGESNIAITGK-GTIDGQGSNETWWPMCGAAHYGWKEGM 195
Query: 177 ---------RKFRAGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNV 215
R ELK RP LI I I ++TL+NSP W +
Sbjct: 196 HSQKLGSRERLMGYAELKRPIYERAMTPEDALRPQLINFYLCNTILIEDVTLLNSPFWVI 255
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP+ S+IV+G+ I PN DG +P+SC N IE+C +GDDC+A+KSG ++ G
Sbjct: 256 HPLLCESLIVRGVKIYN--RGPNGDGCDPESCKNVLIENCRFDTGDDCIAIKSGRNEDGR 313
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAV 332
+ P++ +I+R + V+ +GSE+SGG +++ E+ +DS + +RIKT
Sbjct: 314 KWNRPSENIIVRNCEMKNGHGGVV-IGSEISGGYRNLYVEN-CVMDSPQLDRVIRIKTND 371
Query: 333 GRGGFVKDVYVRRMTM-KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
RGG V++V+VR + + + + I Y S N + P+++N++ +++ EN
Sbjct: 372 CRGGIVENVFVRNIKVGQCHEAVLKINLLYESK--ENCNRAFPPIVRNVHLKNITCENSQ 429
Query: 392 MAARLEGIAGDPFTGICISNVTIE 415
G+ C+ N+++E
Sbjct: 430 YGIYAVGLPNKD----CVYNISVE 449
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 200/449 (44%), Gaps = 58/449 (12%)
Query: 9 RTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSN 68
R + ++L G++ E R+ + S + RA E+FG GDG T N
Sbjct: 4 RRHSLHLLLATGLMTGKAARAEEDREISIAAPGTLSTATVRA-----EDFGARGDGVTRN 58
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T AA+ + + L + PG +LTGS L S L L K L+ Q + +P
Sbjct: 59 T----AALQRAIEAAAAQNATLVLAPGTYLTGSLFLKSGMALRLDKGVTLVGEQTIESYP 114
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-------- 180
V++ R E S+L+ + TDV I G+ G IDG G+++W +F+
Sbjct: 115 VMQT-----RIAGIELPWPSALLNVYDQTDVRIYGE-GKIDGNGKVFWDRFQSIRADYEA 168
Query: 181 -----AGELKYTRPYLIEIMYSQNIQISN------LTLINSPSWNVHPVYSSSVIVQGIT 229
A + RP LI+I S I++ N L L S W V VYS V V GIT
Sbjct: 169 RGLRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHDVKVSGIT 228
Query: 230 ILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + P+TDG++ DS +E I + DD + +K+G D G+ PT+ ++IR
Sbjct: 229 VRNNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIR 288
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAVGRGGFVKDVYVRRM 346
T + ++ V GSE SGGI++VR D+ I G+ K+A RGG D+ + +
Sbjct: 289 NSTIRAAYAGV-TFGSETSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDI 347
Query: 347 TMKTMKWAFWI------TGSYGSHPD--NNYDPH------------ALPVIQNINYRDMV 386
+ + I SY P+ Y + LP + NI R +
Sbjct: 348 DVAQAETGIRINLNWFPAYSYAKIPEGLTAYPAYWATLTAPVPRSKGLPQVHNIRIRRVT 407
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTIE 415
A+ + A LE A P + I I +VT+E
Sbjct: 408 AKGLKTAVDLEAYADVPLSNIQIEDVTLE 436
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 181/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + A+L S D+ + + + G D
Sbjct: 79 GGGTVIVPKGTFYTGPITLKSNVNFHVEEGAILKFSTDQSLY--FPGVITRWEGLDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG + WW R
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNDTWWPMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + + I ++TL+NSP W +HP++ S+IV+G+
Sbjct: 194 YGETSTPVYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG +Q G +G+P++ +I+R
Sbjct: 254 YVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRG 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
V+ +GSE+SGG +++ E+ + + D + +RIKT+ RGG +++V+VR +
Sbjct: 312 CYMKKGHGGVV-IGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNV 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + N + P ++N++ +++ E + + G+ D
Sbjct: 371 TVGQCREAVLRINLQYENR--ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDNDDH- 427
Query: 406 GICISNVTIE 415
+ N+++E
Sbjct: 428 ---VYNISVE 434
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 122/201 (60%), Gaps = 9/201 (4%)
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRD----TEGGRYSSLIFGTNLTDVVITGDNGTID 169
K ++AS +E ++ ++ LPSY RD ++ Y S+ +G + +VV TG+ G I+
Sbjct: 5 KGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDALYRSVFYGEYVENVVFTGE-GLIN 63
Query: 170 GQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
G+GE WW + + LK+ RP L + ++ +N +I LT NSP W +H VYS ++ + +
Sbjct: 64 GEGENWWTR-NSQNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVA 122
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
ILA S NTDGI+ DS +N I D +I GDD +A+KSG+D G +GMPTK +++
Sbjct: 123 ILAEHESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVENS 182
Query: 290 TCISPFSAVIALGSEMSGGIQ 310
I+ A+GSEMSGG+Q
Sbjct: 183 VFINE---NFAIGSEMSGGVQ 200
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + AVL S D+ + + + G D
Sbjct: 79 GGGTVVVPKGTFHTGPITLKSNVNFHVEEGAVLKFSTDQSLY--FPAVITRWEGLDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG E WW R
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGASRYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + + I ++TL+NSP W +HP++ S+IV+G+
Sbjct: 194 YGETSTPVYKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG +Q G + +P++ +I+R
Sbjct: 254 HVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRG 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+ V+ +GSE+SGG +++ E+ + + D + +RIKT+ RGG +++V+VR +
Sbjct: 312 CFMKNGHGGVV-IGSEISGGYRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNV 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + N P ++N++ +++ E + + G+ D
Sbjct: 371 TVGQCREAVLRINLQYENREKCNRG--YAPTVRNVHLKNVTCEKSKLGVLIIGLDDDKH- 427
Query: 406 GICISNVTIE 415
+ NV++E
Sbjct: 428 ---VYNVSVE 434
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 186/393 (47%), Gaps = 59/393 (15%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A +A ID S+ G L + G +LT L + + AVL + DE + P
Sbjct: 21 TEALQALIDE----TSQAGGILVLEKGTYLTAPLFLKNGMEFHFEEGAVLKGTTDETKIP 76
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK--- 185
VI P + G G D Y ++ DV+I+G NGTIDGQGE WWRK+ + K
Sbjct: 77 VI-PTRAAGIGMDW----YPGVLNCNGQKDVIISG-NGTIDGQGEYWWRKYWGDDGKSGM 130
Query: 186 ---YTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
Y + L + IM S I + ++T + S WN+H YS + V GI
Sbjct: 131 RGEYDKKGLRWACDYDCMRVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIHVDGIK 190
Query: 230 ILA-PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I + SP+TDGI+ DSC + +E+C DD + +KSG D GI P + ++
Sbjct: 191 IASCGGESPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQN 250
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ F + +GSE+SGG+ + +++ ++ G RIK++V R G+++DV V ++M
Sbjct: 251 CEIRAGFG--VTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSM 308
Query: 349 KTMKWAF-----W--------ITGSY-GSHPDN-----NYDPHALP--VIQNINYRDMVA 387
+K+ F W + G Y G P++ P ++P + NI ++ A
Sbjct: 309 VNVKYPFHFFLNWNPAYSYCELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIENVTA 368
Query: 388 EN------VTMAARLEGIAGDPFTGICISNVTI 414
N ++ A +EG P + NV++
Sbjct: 369 RNEADYNGISRAFHIEGFEDQPVEHVIFKNVSL 401
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 166/349 (47%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ +FG DGTT NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 74 YTVSILQFGAKSDGTTLNTKAINDAIKAVN---AKGGGKVVIPEGLWLTGPIELLSNVNL 130
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
K+A+++ + D +P++E + G +T R S I N ++ ITG G DG
Sbjct: 131 HTEKNALVVFTDDFNAYPILE---TSFEGLNTR--RCQSPISARNAENIAITG-YGVFDG 184
Query: 171 QGELW------------WRKF--------------RAGELK------------------- 185
G+ W W AG LK
Sbjct: 185 SGDSWRPVKKSKLTAGQWDALVKSGGVVDKSIWYPTAGSLKGALACKNFNNPEGIETDEE 244
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S N
Sbjct: 245 WNEIRPWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNG 304
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N I + +GDD + +KSG D+ G G P + +I++ T + +
Sbjct: 305 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFV 364
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 365 -VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 193/412 (46%), Gaps = 59/412 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ FG +T A + AI +++ G + +P G++LTG+ L S TL L
Sbjct: 5 SILTFGADPSAERISTTAIQQAI-----AKAKPGDSVVIPAGRYLTGAIFLKSDITLHLV 59
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGT-NLTDVVITGDNGTIDGQG 172
+ +VLL SQ +++P+I+ + G D R+ + I N +V +TG GT+DGQG
Sbjct: 60 QGSVLLGSQHLEDYPLIDTRVA---GIDM---RWPAGIINVINAQNVSLTG-TGTLDGQG 112
Query: 173 ELWWRKF-------------RAGELKYT------RPYLIEIMYSQNIQISNLTLINSPSW 213
+WW++F A L++ RP + + S+NI + + T S W
Sbjct: 113 RIWWQRFWGDDEHGGMVGDYSANGLRWVVDYDCQRPRNVLVYESKNILLKDFTSCESGFW 172
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
NVH YS V V+ ++I+ P+TDGI+ DSC RIE C + DD + +K+G +
Sbjct: 173 NVHLCYSRDVAVENLSIINS-AGPSTDGIDIDSCEQVRIERCTVSCNDDNICIKAGRGRE 231
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333
+ ++IR C+ + I LGSE SGGI+ V E+ + G RIK+A
Sbjct: 232 AAPKARTARAIVIRE--CVLNKGSGITLGSETSGGIEHVLIENNRFNGTGVGFRIKSARN 289
Query: 334 RGGFVKDVYVRRMTMKTMKWAFWI------TGSYGSHPDNNYDPH--------------- 372
RGGF++ + VR + ++ +++ I SYG + P
Sbjct: 290 RGGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYGDSGNLQDKPEHWRKLADGVEGEAGL 349
Query: 373 ---ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
+ P + NI R + + A +EG P G+ + N++++ T K
Sbjct: 350 TEVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPVCGLTLDNISVDATEFGK 401
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 212/457 (46%), Gaps = 69/457 (15%)
Query: 6 TAKRTQVICIILLVGIIISLNT---NGVESRKARNSDWFEYSAISCRAHSASLEEFGG-V 61
T K ++ ++LL+ + + NT + V AR + ++ R + + +FG V
Sbjct: 2 TNKTINLLFMLLLMTGVTNANTVDFDKVFKESARIEKQIKRTSFPKRTYR--ITDFGAKV 59
Query: 62 GDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLAS 121
D + +A AI S GG + VP G + TG L S L + AVL S
Sbjct: 60 DDESNLCHEAINQAILQCSL---AGGGTVLVPKGTFYTGPITLKSDVNFHLEEGAVLKFS 116
Query: 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKF 179
D+ + + + G D R LI+ +++ ITG G IDGQG + WW
Sbjct: 117 TDQSLY--FPAVLTRWEGIDCYNAR--PLIYAYGESNIAITG-KGIIDGQGSIDAWWPM- 170
Query: 180 RAGELKY-------------------------------------TRPYLIEIMYSQNIQI 202
G KY RP L+ + I I
Sbjct: 171 -CGSAKYGWKEGMVAQRNGGRERLQMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILI 229
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
+TL+NSP W +HP++ S+IV G+T+ PN DG +P+SC N IE+C +GDD
Sbjct: 230 EGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDD 287
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
C+A+KSG ++ G + +P++ +I+R + V+ +GSE+SGG +++ ED +DS
Sbjct: 288 CIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVV-IGSEISGGYRNLFVED-CQMDS 345
Query: 323 ---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQ 378
+ +RIKT+ RGG +++++VR +T+ + A I Y + P+++
Sbjct: 346 PNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAVLRINLQYENREKCKRGFE--PIVR 403
Query: 379 NINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
N++ +++ E + + G+ D +SN++IE
Sbjct: 404 NVHLKNVTCEKSELGVLIIGLEDDKH----VSNISIE 436
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 191/403 (47%), Gaps = 65/403 (16%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG G+ T+NT A AI + ++GG Q+ +P G+++TG+ +L S+ L L + A
Sbjct: 67 DFGANGNNKTNNTVAINNAIKSCN---AQGGGQVIIPQGQFITGAIHLLSNVNLHLEEGA 123
Query: 117 VLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-- 173
+L S +++ LP+ + R E YS LI+ ++ ITG G ++G
Sbjct: 124 ILSFSTSPEDY-----LPAVFTRWEGLEMMGYSPLIYAFEQENIAITGK-GILEGNANNT 177
Query: 174 LWW-----------------------------RKFRAGELK------------YTRPYLI 192
WW + R E Y RP I
Sbjct: 178 TWWPWKGKHKEAHWELLTDNNGQIIEQKTARDKLMRDAEQHIPVEQRIYADGAYLRPPFI 237
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ N+ I +T+ NSP W V+PV +SV V +T + PN+DG +P+SC + I
Sbjct: 238 QPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVHI 295
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
++C +GDDC+A+KSG + G ++ ++I V+ +GSE+SGG+ +V
Sbjct: 296 KNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGGVV-IGSEISGGVNNV 354
Query: 313 RAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
++ T +DS E +RIKT RGG ++ + +R + + T+K A I Y +
Sbjct: 355 FVQNCT-MDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEGDAGQF 413
Query: 370 DPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISN 411
D P++++I ++ +NV + A L G A DP I ++N
Sbjct: 414 D----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTN 452
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 181/390 (46%), Gaps = 46/390 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFNLTSHFTLFL 112
++++ G G+GTT AFK A R +GG+++ VP G ++ G +L S+ L +
Sbjct: 36 NIQKMGAKGNGTTDCLPAFKKAFKKAVR---KGGARIVVPAGVYYIKGPLHLVSNVCLEI 92
Query: 113 HKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ A L A + E P ++ T YS I+G L DV I G GTIDG
Sbjct: 93 QEGATLKFAPEPEYYLPAVKT-----SWEGTFLQNYSPFIYGYQLHDVSIIG-KGTIDGN 146
Query: 172 GE---LWWRKFRA---------------------GELKYTRPYLIEIMYSQNIQISNLTL 207
WR + GE Y RP+LI++ + I I ++ +
Sbjct: 147 AMTTFATWRSLQKPAQQRSRDMNHAGTPVSERNFGEGDYLRPHLIQLYGCERITIEDVFI 206
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
NSP W +H + S + I++ I A + N DGI+P+ N IED + +GDD VA+K
Sbjct: 207 TNSPFWCIHLLQSENAILRSIRFDAKLV--NNDGIDPEMSRNVLIEDVHFNNGDDNVAIK 264
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGV 326
SG D G P++ +IIR C + LGSEMS GIQ+V E+ A + G+
Sbjct: 265 SGRDHDGRGTACPSENIIIR--NCHFKGLHAVVLGSEMSAGIQNVYVENCDYAGYCKRGL 322
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN--YDPHALPVIQNINYRD 384
IKT RGGF++++ + ++ F+IT YG +N + ++NI R
Sbjct: 323 YIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEGQDNTFFTDIENITVENIQCRK 382
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTI 414
A + L+G P I N+TI
Sbjct: 383 ARAGGLV----LQGTKAKPLRNIQFRNITI 408
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 165/349 (47%), Gaps = 61/349 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FGG DG NT+A AI ++ + GG ++ +P G WLTG L S+ L
Sbjct: 56 YSVNIVDFGGKNDGVALNTQAINDAIKAVN---AHGGGKVIIPEGIWLTGPIELLSNVNL 112
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A+++ + D +P+I+ + G DT R S I N ++ ITG G DG
Sbjct: 113 YTEKNALVVFTDDFSAYPIIK---TSFEGLDTR--RCQSPISARNAENIAITG-YGVFDG 166
Query: 171 QGELW------------WRKF--------------RAGELK------------------- 185
G+ W W AG LK
Sbjct: 167 SGDSWRPVKKGKLTASQWEALVKSGGVVDKSIWYPTAGALKGALACKNFNNPEGIDTDEE 226
Query: 186 ------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNG 286
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
D ++ +SC N I + +GDD + +KSG D+ G G P + ++++ T + +
Sbjct: 287 DALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGHGGFV 346
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+GSEMSGG++++ D T + ++ G+R K+ GRGG V+ +Y+ + M
Sbjct: 347 -VGSEMSGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 158/352 (44%), Gaps = 31/352 (8%)
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
G L + G W + L S T L + AVL A K WP++ G + G
Sbjct: 122 GGTLQLAAGFWTSFPIRLKSSMTFHLAEGAVLRAPASRKGWPILPACDDAGHMLGSWEGL 181
Query: 147 ----YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNI 200
+++ + +++I G G +DG G+ WW + RP + ++ + I
Sbjct: 182 PDACFAAPVHAIGTDNLIIEG-RGVLDGSGDRGDWWSWPKETRDGARRPRGLHLVSCRKI 240
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
Q+ T+ N+ SW +HP +I G+TI AP SPNTDG NP+SC N I G
Sbjct: 241 QLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESCRNVTISGVRFSVG 300
Query: 261 DDCVAVKSGW-------DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
DDC+AVK+G D G+ + ++ R + +GSEMSGG+ DV
Sbjct: 301 DDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMER------GHGGLVIGSEMSGGVHDVS 354
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--- 370
ED + ++ G+R+KT GRGG V ++ +RR+ + ++ A Y D + +
Sbjct: 355 VEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDADGHDERVQ 414
Query: 371 -------PHALPVIQNINYRDMVAENVTMAARL-EGIAGDPFTGICISNVTI 414
P I I D+ N+ AA + G+ P + I N+TI
Sbjct: 415 SRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 179/379 (47%), Gaps = 54/379 (14%)
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTE 143
+GG ++ VPPG++ TG+ +L S+ L + + A L SQD ++ P++ + R E
Sbjct: 93 KGGGKVVVPPGEYHTGAIHLRSNIELHISRGATLRFSQDPADYLPMV-----HTRWEGIE 147
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW------------------------- 176
YS ++ + DV ITG G +DGQ + WW
Sbjct: 148 LYNYSPFVYAHGVHDVAITG-GGVLDGQANPQHWWPWKTEPDGRGGVIETEHRDALHAMA 206
Query: 177 --------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
R+F +L RP ++ S +I +S +TL NSP W +HPV S +VIV G+
Sbjct: 207 ERGVPVEQRRFTDSKL---RPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGV 263
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
T+ +P PN+DG+NP+S N I + +GDDC+A+KSG + G G+P++ ++I
Sbjct: 264 TLDSP-DGPNSDGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHD 322
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRR 345
V+ +GSEMSG +++V AE +DS + +RIKT RGG V+ VY R
Sbjct: 323 NRMFDGHGGVV-IGSEMSGDVRNVFAER-NVMDSPRLDRALRIKTNSVRGGTVEGVYFRD 380
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ + A + D P ++ ++ ++ + A L G P T
Sbjct: 381 NDIPEVADAVIRVNFHYEEGDTG---DFTPTVRGLHIENVHSVGGEFALYLRGYERSPVT 437
Query: 406 GICISNVTIELTNKPKKLQ 424
+ I + T P L+
Sbjct: 438 DVTIRDSTFSEVTTPMLLE 456
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 173/352 (49%), Gaps = 66/352 (18%)
Query: 51 HSASLEEFGGVGDGTTS-NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
S + +FG + + N +A + AI L+R +GG ++ VP GKW TG+ L+S
Sbjct: 42 RSVVITKFGAKTTASAAQNQRAIQKAIAFLAR---QGGGKVVVPAGKWHTGALRLSSGIE 98
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNG 166
L + KDA+L + +P+++ EG YS I+ DVV++G+ G
Sbjct: 99 LVVSKDALLQFVFERSLYPLVKT--------SWEGMMCWNYSPCIYSFGSDDVVVSGE-G 149
Query: 167 TIDGQG--ELWW---------------------------------------RKFRAGELK 185
TIDG G E WW R+F G
Sbjct: 150 TIDGGGSNETWWPMCGKEVFGYVKGVTKEAQVLGSRRRLQQMAEDDVPWDERRFGLG--Y 207
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
RP LI + +++S +TL+NSP W +HP+ +V V G+ I PN DG +P+
Sbjct: 208 GLRPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPE 265
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
+C N I++ + +GDDC+A+KSG + G + P+K +IIRR ++ +GSE+
Sbjct: 266 ACENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGHGGIV-IGSEI 324
Query: 306 SGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
SGG +V AED T +DS + +RIKT RGG ++++ VRR+ + K A
Sbjct: 325 SGGCMNVFAEDCT-MDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCKEA 375
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 175/398 (43%), Gaps = 51/398 (12%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHKD 115
FGG DG + A + AID R GG ++ + PG W + G L SH L +
Sbjct: 62 RFGGRADGRSDARPAIQKAIDAAHR---AGGGRVTLSPGVWFSRGPVRLKSHVELRVEAG 118
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
A LL S + ++ + P+ + G TE YS I+ + DV ITG G IDG +
Sbjct: 119 ATLLFSPEPDDY--LPPVKTRWEG--TEVYTYSPFIYAAGVEDVAITG-GGVIDGNAQSR 173
Query: 176 WRKF------------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
+ + R G+ + RP LI++ + +++ T NSP
Sbjct: 174 FHAWHNLAEPDFQRLRRMGFEGVPVAQRRFGKGTHLRPPLIQVFGGKRVRLEGFTARNSP 233
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W H VY+ V+V+GIT+ + PN DG++ +S T IE+ +GDD V +KSG D
Sbjct: 234 FWVNHLVYADEVVVRGITVDSHF--PNNDGVDVESSTRVLIENSRFRTGDDSVVIKSGRD 291
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
G G P+ +++R IALGSEMSGG+ DV D S +R K
Sbjct: 292 LDGRRIGRPSAWVLVRGNDMGG--EDGIALGSEMSGGVHDVFFTDNVLRKGLSAIRFKAN 349
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
+ RGG V+ V VR MT++ FW +Y N+ YRD+V EN
Sbjct: 350 LDRGGTVERVRVRNMTVEDFGTLFWFQLNYPGELGGNFPS---------TYRDIVFENFK 400
Query: 392 MAA-----RLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+ A P + + N+ + P L+
Sbjct: 401 VGGAGTFFEAHAPAQAPLKDVVLRNIVVREAKVPWVLE 438
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 67/392 (17%)
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
+A AAID ++R +GG ++ VP G WL +G +L S+ L + A + S + ++
Sbjct: 87 QALHAAIDQVAR---QGGGKVVVPKGDWLCSGPIHLQSNINLHIEAGATIRFSTNPDDYK 143
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW--------- 176
P + + R E YS LI+ +++ ITG GT+DG + WW
Sbjct: 144 PYV-----FTRWEGMELMGYSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKAS 197
Query: 177 ---------RKF-----------------RAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
+K+ R E Y RP I+ +N+ I +T++ S
Sbjct: 198 TWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRS 257
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W V+PV +V V + PN+DG +P+SCTN I +C +GDDC+A+KSG
Sbjct: 258 PFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGR 315
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT--AIDSESGVRI 328
+ G +P ++I + V+ +GSE+SGG++++ A+ T + D + G+RI
Sbjct: 316 NADGRRVNVPCSNIVIEHCEMKAGHGGVV-IGSEISGGVENLYAQHCTMSSPDLDRGIRI 374
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWA-----FWITGSYGSHPDNNYDPHALPVIQNINYR 383
KT RGG +K++ R + + T+K A F+ G G+ P P++++I
Sbjct: 375 KTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP---------PLLEDITIE 425
Query: 384 DMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
++ + A L G P +G+ ++N+TI+
Sbjct: 426 NLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 199/446 (44%), Gaps = 77/446 (17%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+E++G DG T NTK+ AAID S+ GG +F+ G WLTG L S+ L + +
Sbjct: 62 VEKYGAKPDGITLNTKSINAAIDACSK---NGGGVVFLGGGVWLTGPIQLKSNVNLHVKR 118
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
DA+LL ++D+ ++ ++E G S I N+ +V ITG+ G IDG GE+
Sbjct: 119 DAILLFTKDKSQYKLVE-----GNWEGKPALVNESPISAFNVENVAITGE-GIIDGSGEV 172
Query: 175 W-----------------------------W---------------RKFRAGEL------ 184
W W R F+AG
Sbjct: 173 WRLVKKGKLTASQWKNLVASGGVLSKDGQSWMPSESYKKGDEAGNARYFKAGSKLADYEP 232
Query: 185 --KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGI 242
+ RP L I S+ I + +T NSP+W +HP+ S ++++ + + P + N DGI
Sbjct: 233 MKDFYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGI 292
Query: 243 NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALG 302
+ +SC N IE+ GDD + +KSG D+ G MPT+ +I+R + +G
Sbjct: 293 DIESCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHGGFV-IG 351
Query: 303 SEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM----------- 351
SEMSGG +++ + + I ++ G+R KT GRGG V++VY+ MK +
Sbjct: 352 SEMSGGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAILFDMYY 411
Query: 352 --KWAFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
K + G P + P A P +N +++V + GI I
Sbjct: 412 EAKDPVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPEMNVQNI 471
Query: 408 CISNVTIELTNKPKKLQWNCTDITGI 433
+ ++T+E + ++ N +I +
Sbjct: 472 YLEDLTLEAKTGIEIIEGNNINIKNV 497
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 192/412 (46%), Gaps = 65/412 (15%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG G+ +++AF AI + GG ++ VPPG WLTG +L S+ L + K
Sbjct: 50 ITDFGADGEAVADSSEAFARAIAACH---AAGGGRVVVPPGWWLTGPIHLKSNVNLHVQK 106
Query: 115 DAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ-- 171
A +L D K + P++ + R E YS ++ ++ +TG+ G +DGQ
Sbjct: 107 GATILFKTDPKAYLPLV-----FTRWEGVELMNYSPFVYAFEQENIAVTGE-GVLDGQCS 160
Query: 172 GELWW--------------------RKFRA-----------------GELKYTRPYLIEI 194
E WW R RA GE Y RP I+
Sbjct: 161 REHWWTWKGPWKQNQHGWAEGMPNQRPARARLFQMAEDRTPVEQRVFGEGSYLRPPFIQP 220
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
N+ I ++L SP W VHPV +V ++ + I + PN DGI+P+SC + IED
Sbjct: 221 YRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDPESCDHVLIED 278
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA 314
C+ +GDDC+A+ SG ++ G G+P + ++IR ++ + +GS++SG +++V A
Sbjct: 279 CFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCR-MADGHGGLTIGSQISGHVRNVFA 337
Query: 315 ED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
E+ + + D + +R K RGG V+ V R + + ++ A D NY+
Sbjct: 338 ENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVTV-------DFNYEEG 390
Query: 373 A----LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
A PV++++ ++ + A L+G+ G P I I + +P
Sbjct: 391 ANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAEP 442
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + AVL S D+ + + + G D
Sbjct: 79 GGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLKFSTDQSLY--FPGVITRWEGIDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG E WW R
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + + I ++TL+NSP W +HP++ S+ V+G+
Sbjct: 194 YGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG +Q G +G+P++ +I+R
Sbjct: 254 YVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRG 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
V+ +GSE+SGG +++ E+ + + D + +RIKT+ RGG +++V+VR +
Sbjct: 312 CYMKKGHGGVV-IGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNV 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + N + P ++N++ +++ E + + G+ D
Sbjct: 371 TVGQCREAVLRINLQYENR--ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDDDDH- 427
Query: 406 GICISNVTIE 415
+ N+++E
Sbjct: 428 ---VYNISVE 434
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 188/433 (43%), Gaps = 79/433 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FG DG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K++++L S D +P+I + G +T R S I N ++ ITG +G DG
Sbjct: 116 YTEKNSLVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARNAENIAITG-HGVFDG 169
Query: 171 QGELW------------WRKFRA---------------------------------GEL- 184
G+ W W+K A GEL
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + T NSPSW +HP+ ++ + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC I + +GDD + +KSG D+ G G P + +I+ T +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG+ ++ ++ T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 357 ITGSY----GSHPDNNYDP-----------HALPVIQNINYRDMVAENVTMAARLEGIAG 401
I Y G D N D P+ +NI +D+ A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 402 DPFTGICISNVTI 414
I + N+ +
Sbjct: 469 MRIKNINMENIIV 481
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 67/392 (17%)
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
+A AAID ++R +GG ++ VP G WL +G +L S+ L + A + S + +++
Sbjct: 87 QALHAAIDQVAR---QGGGKVVVPKGDWLCSGPIHLQSNINLRIEAGATIRFSTNPEDYK 143
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW--------- 176
P + + R E YS LI+ +++ ITG GT+DG + WW
Sbjct: 144 PYV-----FTRWEGMELMGYSPLIYAFEQSNIAITG-KGTLDGSAAKDNWWPWKGKWKAS 197
Query: 177 ---------RKF-----------------RAGELKYTRPYLIEIMYSQNIQISNLTLINS 210
+K+ R E Y RP I+ +N+ I +T++ S
Sbjct: 198 TWGDDPVENQKYTRDTLQEMVENGTPVSDRVFENNYLRPPFIQPYRCENVLIEGVTILRS 257
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W V+PV +V V + PN+DG +P+SCTN I +C +GDDC+A+KSG
Sbjct: 258 PFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVLISNCTFDTGDDCIAIKSGR 315
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT--AIDSESGVRI 328
+ G +P ++I + V+ +GSE+SGG++++ A+ T + D + G+RI
Sbjct: 316 NADGRRVNVPCSNIVIEHCEMKAGHGGVV-IGSEISGGVENLYAQHCTMSSPDLDRGIRI 374
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWA-----FWITGSYGSHPDNNYDPHALPVIQNINYR 383
KT RGG +K++ R + + T+K A F+ G G P P++++I
Sbjct: 375 KTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGKFP---------PLLEDITIE 425
Query: 384 DMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
++ + A L G P +G+ ++N+TI+
Sbjct: 426 NLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 65/395 (16%)
Query: 72 FKAAI-DHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFLHKDAVLLASQDEKEW-P 128
FK A+ D +S+ S+GG ++ VP G WL G +L S+ L + A + S + ++ P
Sbjct: 85 FKQALHDAISQIASQGGGKVVVPKGNWLCKGPIHLQSNINLHVELGATIQFSTNPDDYKP 144
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG--QGELWW---------- 176
+ + R E YS LI+ T++ ITG GT+DG + WW
Sbjct: 145 YV-----FTRWEGMELMGYSPLIYAYEQTNIAITG-KGTLDGCAAKDNWWPWKGKWKAST 198
Query: 177 --------RKF-----------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSP 211
+K+ R E Y RP I+ +N+ I +T++ SP
Sbjct: 199 WGDDPVENQKYTRDTLQEMVERGTPVSERVFEKNYLRPPFIQPYRCENVLIEGVTILRSP 258
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W V+PV +V V + PN+DG +P+SCTN I +C +GDDC+A+KSG +
Sbjct: 259 FWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPESCTNVIISNCTFDTGDDCIAIKSGRN 316
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE--DITAIDSESGVRIK 329
G +P +II + V+ +GSE+SGG++++ A+ +++ D + G+RIK
Sbjct: 317 ADGRRVNVPCSNIIIEHCEMKAGHGGVV-IGSEISGGVENLYAQYCTMSSPDLDRGIRIK 375
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWA-----FWITGSYGSHPDNNYDPHALPVIQNINYRD 384
T RGG +K++ R + + T+K A F+ G G+ P P++++I +
Sbjct: 376 TNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEGDAGNFP---------PLLEDITIEN 426
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
+ + A L G P +G+ ++NVTI+ K
Sbjct: 427 LNVVSANRAFVLRGYDHTPISGLTLNNVTIKHAQK 461
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 190/417 (45%), Gaps = 65/417 (15%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + FG GDG T N+ A AI + ++ VP G++LTG+ +L S+
Sbjct: 43 ARDFDVTRFGARGDGQTLNSTAIARAIAACAAAGG---GRVVVPAGRFLTGAVHLRSNVN 99
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L L A LL S D K++P++ + R E YS L++ ++ ITG+ GT+D
Sbjct: 100 LHLQAGATLLFSTDPKDYPLV-----FTRWEGIELMNYSPLVYARQQRNIAITGE-GTLD 153
Query: 170 GQGEL--WW---------------------RKFRA-----------------GELKYTRP 189
GQG WW RK RA GE + RP
Sbjct: 154 GQGSARHWWSWKGPWGGTVDHGWREGMPDQRKARAILFEMAERRVPVEKRVFGEGSFLRP 213
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
++ +N+ I + L +P W +HPV ++IV+G+ +L PN DG +P+S
Sbjct: 214 AFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPESVDG 271
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
IE C +GDDC+A+ SG ++ G MP + ++IR V+ +GS++SGG
Sbjct: 272 ALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHGGVV-VGSQISGGA 330
Query: 310 QDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
+ + AE + + D +R K RGG +++ + R + + T+ A D
Sbjct: 331 RWIFAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAAVTC-------DF 383
Query: 368 NYDPHA----LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
NY+ A +P ++N+ + +N +G+ G P TG+ + + + + +P
Sbjct: 384 NYEEGANGRFVPRLRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSFDGVTQP 440
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 188/433 (43%), Gaps = 79/433 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+S ++ +FG DG T NTKA AI ++ ++GG ++ +P G WLTG L S+ L
Sbjct: 59 YSVNIIDFGAKPDGITLNTKAINDAIQQVN---AKGGGKVIIPEGLWLTGPIELLSNVNL 115
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ K+A++L S D +P+I + G +T R S I + ++ ITG +G DG
Sbjct: 116 YTEKNALVLFSADHSLYPIIN---TSFEGLETR--RCQSPISARDAENIAITG-HGVFDG 169
Query: 171 QGELW------------WRKFRA---------------------------------GEL- 184
G+ W W+K A GEL
Sbjct: 170 NGDTWRPTKKDKLTEGQWKKLIASGGVVDADGRIWYPSEGALKGAILSKDNFNVPRGELT 229
Query: 185 --------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
+ RP L+ + + + T NSPSW +HP+ ++ + +T+ P S
Sbjct: 230 DSDWDYMRDWLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYS 289
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N D ++ +SC I + +GDD + +KSG D+ G G P + +I+ T +
Sbjct: 290 QNGDALDLESCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHG 349
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356
+ +GSEMSGG+ ++ ++ T + ++ G+R K+ GRGG V+++Y+ + M +
Sbjct: 350 GFV-VGSEMSGGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMINIPNEAL 408
Query: 357 ITGSY----GSHPDNNYDP-----------HALPVIQNINYRDMVAENVTMAARLEGIAG 401
I Y G D N D P+ +NI +D+ A G+
Sbjct: 409 IFNLYYGGKGRGEDPNQDEKKAETTIPPVTEETPIFRNIFIKDVTCNGAGRAVFFNGLPE 468
Query: 402 DPFTGICISNVTI 414
I + N+ +
Sbjct: 469 MRIKNINMENIIV 481
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 94/137 (68%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ +ALGSEMSGGI+ V A+DI +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+VKDVY+ +TMK + TG YG HPD+ YDP+ALP IQ I ++D++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ + A + GI PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 23/347 (6%)
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
G+ L+VPPG W TG L S + + + A + D + ++E + GR + + G
Sbjct: 115 GATLYVPPGIWRTGPVFLKSGLFVHVPEGATIKGVADRGAYRMLEAFGADGRQQASWEGV 174
Query: 147 ----YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNI 200
Y SL+ + V I G G IDG G WW + RP + +
Sbjct: 175 PARCYGSLLTAIDADGVTIAG-KGVIDGAGAEGDWWEWPKETREGARRPRTVFANRCTQL 233
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
++S LT+ NSPSW +HP+ + + + I P SPNTDG+NP+S T+ I G
Sbjct: 234 KMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESSTDIEIVGVRFSVG 293
Query: 261 DDCVAVKSG--WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT 318
DDC+A+K+G W + PT+ + +R V+ +GSEMSG + DV T
Sbjct: 294 DDCIAIKAGKIWPDGTVP--APTRNVSVRHCLMERGHGGVV-IGSEMSGSVTDVTVAFCT 350
Query: 319 AIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP------- 371
D++ G+RIKT GRGG V + + M +K I Y PD D
Sbjct: 351 MRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPDGRSDAVQNRAPA 410
Query: 372 ---HALPVIQNINYRDMVAENVTMA-ARLEGIAGDPFTGICISNVTI 414
A P I +I + +N A A + G+A P +G+ I++V++
Sbjct: 411 PVSAATPKIGDIRFERTEVKNAHHALAYVLGLAEAPVSGLTIADVSV 457
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 65/414 (15%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A ++++FG +G T+A +AI+ ++GG Q+++P G + TG+ +L S+
Sbjct: 44 AKQFNIKDFGAKENGQYDCTQAINSAIEAC---HAQGGGQVYIPDGTYFTGAIHLLSNVN 100
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L +A++ S D + LP + R E YS LI+ ++ ITG GT+
Sbjct: 101 LHLSDNAIVSFSTDPTHY-----LPEVFTRWEGLEMMGYSPLIYAFEQENIAITG-KGTL 154
Query: 169 DGQG--ELWW------------------------RKFRAGEL-----------------K 185
G G + WW R+ R +
Sbjct: 155 QGNGDNQTWWPWKGPHKEGHWDLIKDSQGKVLHQREARDQLMVDAEAGVPVSERIYSTGA 214
Query: 186 YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPD 245
Y RP I+ +NI I +T+ NSP W ++PV SV V + + PN+DG +P+
Sbjct: 215 YLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSDGCDPE 272
Query: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305
SC + I++C +GDDC+A+KSG + G G+P++ ++I V+ +GSE+
Sbjct: 273 SCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHGGVV-IGSEI 331
Query: 306 SGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362
SGG+ +V ++ T +DS E +RIKT RGG ++ + +R + + T+K A I Y
Sbjct: 332 SGGVNNVFVQNCT-MDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYYE 390
Query: 363 SHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIE 415
+D P +++I ++ +NV + A L G P I N +
Sbjct: 391 EGDAGQFD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKNCHFD 440
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 196/438 (44%), Gaps = 74/438 (16%)
Query: 51 HSASLEEFGGVGDGTTS-NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
S + +FG + + N KA AI L++ +GG ++ VP GKW TG+ L S
Sbjct: 42 RSVVITKFGAKTSASAAQNQKAILRAIAVLAK---QGGGKVIVPAGKWNTGALRLQSGIE 98
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNG 166
L + KDA L D +P+++ EG YS I+ DVV++G+ G
Sbjct: 99 LVVSKDAHLQFVFDRDLYPLVKT--------SWEGMMCWNYSPCIYSYEANDVVVSGE-G 149
Query: 167 TIDGQG--ELWW-------------------------------------RKFRAGELKYT 187
TIDG G E WW + R G+
Sbjct: 150 TIDGGGSNETWWPMNGKANFGYVKGVTKEAQVLGSRARLQKMAEADMPWDERRFGKGYGL 209
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI + I+IS +TL+ SP W +HP+ +V V G+ I PN DG +P+ C
Sbjct: 210 RPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGC 267
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N I++ +GDDC+A+KSG + G + P+K +IIR V+ +GSE+SG
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHGGVV-IGSEISG 326
Query: 308 GIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
G Q++ AED + + + + +RIKT RGG ++++ +RR+ + K A + + P
Sbjct: 327 GCQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAV-VKINLDYEP 385
Query: 366 DNNYDPHALPVIQNINYRDMVAENVTMAARLEG-----------IAGDPFTGICISNVTI 414
PV++N+N D+ + + G + F GI NV I
Sbjct: 386 KEPCYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKENVKI 445
Query: 415 ELTNKPKKLQWNCTDITG 432
T K + + ++ + G
Sbjct: 446 --TGKTRHITFDNVKMDG 461
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 181/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ L + AVL D+ + + + G D
Sbjct: 79 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFLTDQSLY--FPGVITRWEGLDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG + WW R
Sbjct: 137 R--PLIYAYGETNIAITG-KGTIDGQGSNDTWWPMCGAAKYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + I I ++TL+NSP W +HP++ S+IV+G+
Sbjct: 194 YGETSTPIYKRVMTPEDGLRPQLINLYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
I PN DG +P+SC N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 254 NIFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRN 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+ V+ +GSE+SGG +++ E+ + + + + +RIKT+ RGG +++V+VR +
Sbjct: 312 CKMKNGHGGVV-IGSEISGGYRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDI 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + N + + PV++N++ +++ E + + G+ D
Sbjct: 371 TVGQCREAVLRINLQYENR--ENCNRNFPPVVRNVHLKNVTCEKSRLGVLIIGLDDDQH- 427
Query: 406 GICISNVTIE 415
+ N+++E
Sbjct: 428 ---VYNISVE 434
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 188/428 (43%), Gaps = 74/428 (17%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S+ ++ V G SNT A AI LS+ GG + VP G WLTG L S+ L
Sbjct: 14 RQVSITDYKAVSGGIESNTAAINQAITELSKL---GGGTVNVPEGIWLTGPITLKSNINL 70
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L K A++ ++ +E+P+I L +Y G+ R R S I + ++ ITG+ G ID
Sbjct: 71 HLEKGALITFDKNPEEYPII--LTNYEGQPR----LRAVSPIHAFDEENIAITGE-GVID 123
Query: 170 GQGELW--WRKFRAGELKYT---------------------------------------- 187
G G W ++F+ + ++
Sbjct: 124 GNGHEWRPLKEFKVTKKQWQARLKKSPYVIDTKEGGIWYPSKTSYEGCLEGEVSVEDPDA 183
Query: 188 -----------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
RP + ++ I I +TL NSP+WN+HP+ +++ ++ I +
Sbjct: 184 LKKAAPNYDLYRPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFA 243
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N DG++ +SC I GDD + +KSG + G +PT+ + IR
Sbjct: 244 QNGDGLDLESCRFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHG 303
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK------- 349
+ +GSEMS G++DV E+ + +++G+R K+A+GRGG V+D+ +R + M
Sbjct: 304 GFV-IGSEMSRGVRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAI 362
Query: 350 --TMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
TM + + S + +P +NI RD+ A +++G+ P I
Sbjct: 363 IFTMGYTLFRLDHQASDEPDTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDI 422
Query: 408 CISNVTIE 415
+ NV I+
Sbjct: 423 ILENVMIQ 430
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMRPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMKNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 71 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 125
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 126 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 182
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 183 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 242
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 243 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 300
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 301 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 359
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 360 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 415
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 416 DDKH----VYNISVE 426
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETLTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 56/416 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FG V S TKA A ++ GG ++ +P G+W +G +L S+ L L
Sbjct: 61 SITDFGAVEKEKISTTKAISQA---IAAASDAGGGRVIIPAGEWFSGKIHLKSNVNLHLS 117
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A+L S D +++ LP+ + E YS LI+ +V ITG G + +
Sbjct: 118 EGAILTFSGDPQDY-----LPAVHTTWEGIECYNYSPLIYAYKCENVAITGA-GQLKAEM 171
Query: 173 ELWWRKF---------------------------RAGELKYTRPYLIEIMYSQNIQISNL 205
+W R F + + RP I+ +N+++ +
Sbjct: 172 GVWKRWFARPPAHMNSLKKLYHMAAKGVAVQERVMVNDTSHLRPQFIQFNRCKNVRMEGV 231
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T+INSP W +HP +V+++ + + A N DG++P+ C N IEDC GDD +A
Sbjct: 232 TIINSPFWVIHPYMCHNVVIRNVKVYA--HGHNNDGVDPEMCENVLIEDCVFDQGDDAIA 289
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSG +Q P++ +++R + ++A+GSE+SGG+++V E+ T ++
Sbjct: 290 IKSGRNQDAWRLNTPSRNIVVRN-CLVKNGHQLLAIGSELSGGVENVFLENCTVEENARM 348
Query: 326 ---VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHAL 374
V IKT RGG+VK+VYVR +T M G G D Y L
Sbjct: 349 FHLVFIKTNERRGGYVKNVYVRNVTADKMS-----QGILGIDTDVLYQWRDLVPTYEKRL 403
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
I ++ D+ A V +R+ P I + N+ +E K + N +
Sbjct: 404 TPISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVEQITGEKLIHNNVVNF 459
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 57/402 (14%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+F V D T+ +T+A + AID + G + +P G++LTG+ L S TL L KDA
Sbjct: 8 DFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELAKDA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VLL SQ +++P I + G D + + + N V +GT+DGQG +WW
Sbjct: 63 VLLGSQQLEDYPEIATRVA---GIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGAVWW 116
Query: 177 RKF-----RAGEL-KYTR-------------PYLIEIMYSQNIQISNLTLINSPSWNVHP 217
KF +G L YTR P + + S+ + + + T +S WN+H
Sbjct: 117 HKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNLHV 176
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
YS V +Q + ++ T P+TDGI+ DS R+E C + DD + VKSG
Sbjct: 177 CYSKQVNLQRLNVM-NATGPSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQL 235
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
+ +IIR T + + I LGSE SGGI++V E + G RIK+A RGG+
Sbjct: 236 ARTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGW 293
Query: 338 VKDVYVRRMTMKTMKWAFWI------TGSYGSHPDNNYDPH-------------ALPVIQ 378
+K++ VR + M+ + + F + SY P + P L ++
Sbjct: 294 IKNIIVRHLIMEDVGYPFMLQLNWFPQYSYSEQPADTEQPSYWRKLAAGVTGDAGLTRVE 353
Query: 379 NINYRDMVAE-----NVTMAARLEGIAGDPFTGICISNVTIE 415
NI + + + A +EG +P + S++T++
Sbjct: 354 NIRISHISSSLTQPTTFSRAFFIEGTPENPIEQLSFSDITLQ 395
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 170/355 (47%), Gaps = 63/355 (17%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
+++ S+ +FGG GDG T NT AF A ++ + GG ++ VP G W TG L +
Sbjct: 44 SNTVSVADFGGSGDGHTLNTAAFADA---IAALAARGGGRVVVPEGVWYTGPIELKDNTE 100
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L L ++AV++ S D+ +P++E + G +T R S I + +V ITG G ID
Sbjct: 101 LHLEQNAVIVFSDDKTLYPLVE---TTFEGLNTL--RCQSPISARGVKNVAITG-RGVID 154
Query: 170 GQGELW--------------------------------------------------WRKF 179
G G+ W W K
Sbjct: 155 GNGDAWRAVKQDKLNPRQWKTLVRSGGVLSDDGKTWYPSESYKFGATSGADQNVSTWAKT 214
Query: 180 RAGELK---YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
RA + + RP +I + + +N+ + + NSP WN+HP +++IV IT+ P +
Sbjct: 215 RADFERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYA 274
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
N DGI+ +SC N + + GDD + +KSG D+ G G+P + +++
Sbjct: 275 QNGDGIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHG 334
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ +GSEMSGG+++VR + T ++ G+R K+A GRGG V+++++ + M +
Sbjct: 335 GFV-VGSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNI 388
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 167/345 (48%), Gaps = 35/345 (10%)
Query: 30 VESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQ 89
VE ARN I S ++ ++G V DG T NTKA + AID +R GG
Sbjct: 31 VEKTGARN--------IPKSNRSYNVADYGAVADGVTMNTKAIQKAIDECAR---NGGGT 79
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+ PGK+LTGS L + K LL S D K++P + R E S+
Sbjct: 80 VTFSPGKYLTGSVYLKEGVHFIIPKHTTLLGSTDLKDYPEMNT-----RVAGIEMQWPSA 134
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKY-------------TRPYLIEIMY 196
LI +V+++G+ G + QG+++W + A Y RP + +
Sbjct: 135 LINVLGQKNVMVSGE-GVVHAQGKVFWDSYWAMRKDYEAKGLRWIVDYDCKRPRTLLVSE 193
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIED 254
S ++ + LT + W + +YSS V G+ I V P+TDG++ DS + +E+
Sbjct: 194 SSDVTVKGLTFRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDIDSSSYILVEN 253
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVR 313
C I DD +KSG D G+ PT+ ++IR CIS ++ GSE SGGI+ V
Sbjct: 254 CDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIR--NCISRAGGGLLTCGSETSGGIRHVL 311
Query: 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
AE + A + G+R+K+A+ RGG + +Y+R + M ++ F T
Sbjct: 312 AEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVRTVFEAT 356
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 184/410 (44%), Gaps = 63/410 (15%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G DG+ T AF+ AI ++ GG ++VPPG++ +G L S+ TL +
Sbjct: 32 NIADYGAKKDGSAPATDAFRQAIQAA---KAAGGGTIYVPPGRYTSGPIELFSNMTLDID 88
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A + E+PV E + GR E LI GT + +V +TG G E
Sbjct: 89 AGARV-------EFPVAELPFTRGRYLGVETLTPMPLIGGTGVENVTVTGRGILTTGDYE 141
Query: 174 LWWRKF-----------------------------------------RAGELKYT----- 187
W + + RA E +Y
Sbjct: 142 AWRKAYPAAYQEYLKLHNGVISTGGSEAFSANGPRWDHLLKVLETGHRASEEEYRLAAAE 201
Query: 188 -RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS 246
RP I M ++N+ + ++ +I +P + VH +Y+ + V+ + I P+ + I DS
Sbjct: 202 LRPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMIQT-YPGPHANAIVADS 260
Query: 247 CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS 306
I D YI +GDD + +KSG D GI PT+ + I T AV+ +GSE +
Sbjct: 261 SRFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGAVV-IGSETA 319
Query: 307 GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY--GSH 364
G I+DV A +ITAID+E+G+RIK+ GRGG V D+ TM+ + +T Y G
Sbjct: 320 GSIRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGGE 379
Query: 365 PDNNYDP--HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNV 412
D +P P +NI ++ ++G+ P TG+ +++V
Sbjct: 380 SDTKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDV 429
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPVTLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 201/450 (44%), Gaps = 72/450 (16%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
S + S + ++G V DG NT+A AAID ++ +GG + VP G W TG L S
Sbjct: 32 SFKKDSTWITKYGAVADGQMLNTQAINAAIDACNK---KGGGVVVVPAGLWATGPITLKS 88
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
+ L L K AVL ++D ++ ++E G R S + TN T++ ITG G
Sbjct: 89 NVNLHLKKGAVLQFTKDFNQYQLVE-----GNWEGIPQMRNQSPVSATNATNIAITG-FG 142
Query: 167 TIDGQGELW------------WRKFRAG---------------------ELK-------- 185
IDG GE W W+++ AG ++K
Sbjct: 143 VIDGGGEAWRQVRKEKLTESQWKEWVAGGGVVSEDGKSWYPSEQWLKAAKMKNPGEFTPD 202
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
+ RP LI + + + + +T NS +W +HP+ S + V+ +T+ P
Sbjct: 203 KTPEFYKSIKDFLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPW 262
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
+ N DGI+ +SC IE+ GDD + +KSG D+ G GMPT+ +IIR
Sbjct: 263 FAQNGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCKVYHA 322
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG +++ + T I ++ G+R KT GRGG V+++Y + M +
Sbjct: 323 HGGFV-IGSEMSGGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMIDIPGE 381
Query: 355 FWITGSYGSHPDNNY---DPHALPVIQNI-------NYRDMVAENVTMAARLEGIAGDPF 404
+ Y D + LP ++ + +R+ V +NV +GI
Sbjct: 382 AILFDMYYMSVDPVALAGEKRELPKVEKLPVDEGTPQFRNFVVKNVVCNGAAKGIFLRGI 441
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + +V +E + +C + +GI+
Sbjct: 442 PEMHVKDVLLENCILQARKGIDCQEASGIT 471
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 172/333 (51%), Gaps = 41/333 (12%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKD 115
+ G GD + N KAF A ++ + G + VP G + + G + S+ L L K
Sbjct: 48 KLGAKGDSVSDNKKAFDKA---MALCKKNNGGTIIVPKGIYKINGPIHFVSNVNLKLEKG 104
Query: 116 AVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A + S + +++ P++ L S+ T YS LI+ N T++ I+G+ GTIDG+G
Sbjct: 105 AKIKFSDNPEDYLPMV--LTSW---EGTMLYNYSPLIYANNCTNIAISGE-GTIDGEGGK 158
Query: 175 WWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLINS 210
W+ F+A GE + RP +I+ + +NI + N+ + NS
Sbjct: 159 TWKTFKAKENEGKNRSRDMNHNNTPLSERKFGEGYFLRPQMIQFLNCKNILVENIRIENS 218
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W +H + S S+ ++GI+ + + N DGI+P+ + IE+ +GDD VA+K+G
Sbjct: 219 PFWCLHLLKSESITIRGISYKS--LNHNNDGIDPEYAKDVLIENVTFDNGDDNVAIKAGR 276
Query: 271 DQYGIA-YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI-TAIDSESGVRI 328
D G A P++ +IIR VI GSEMS G+Q+V E+ TA + G+ +
Sbjct: 277 DHEGRANTATPSQNIIIRNCNFKGLHGVVI--GSEMSAGVQNVFVENCKTAGYLKRGIYL 334
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
KT RGG++K+++VR + + ++ +IT +Y
Sbjct: 335 KTNADRGGYIKNIFVRNIQLDQVEDCLYITANY 367
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 195/410 (47%), Gaps = 42/410 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG GDG + +T +AAI S++ +P G + S L S ++ L
Sbjct: 84 NVRKFGAKGDGVSDDTTFIQAAI-----MACPPESRVLIPAGTYKITSLFLKSGISVELA 138
Query: 114 KDAVLLASQDEKEWPVIEPL-PSYGRGRDTEGG--------RYSSLIFGTNLTDVVITGD 164
K A LLA D + ++ L SY D G ++ +I G +++DV + G+
Sbjct: 139 KGAELLADTDRSHYAILPGLIESYDETGDYNLGTWEGNPLPMFAGIISGIDVSDVNLYGE 198
Query: 165 NGTIDGQG--ELWWR--KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
G+I+G E WW+ K G RP ++ + +NI++ L +SP+W +HP +S
Sbjct: 199 -GSINGAASHENWWKNEKVMVGAF---RPRMLSLNRCRNIRVQGLYFHDSPAWVIHPYFS 254
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
++ + + P SPNTDG++P+SC + I GDDC+AVKSG G Y P
Sbjct: 255 DELLFCNLIVENPAKSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTP 314
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338
+ + + + AV +GSEM+GG+ ++ E ++ G+RIKT GRG +
Sbjct: 315 SSNIHVYQCLMEHGHGAV-TVGSEMAGGVNNLIVEKCRFYHTDRGLRIKTRRGRGKDAIL 373
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPD------NNYDPHAL----PVIQNINYRDMVAE 388
++ R + M+ + F Y PD + +P+ + P ++ + ++ A+
Sbjct: 374 DNIIFRDLMMEQVMTPFTANAFYFCDPDGRTEFVQSREPYPVDDGTPSMKRFCFENITAK 433
Query: 389 NVTMAAR-LEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGV 437
+ +AA +G+ I + NV++ + K D+ +S+GV
Sbjct: 434 DCHVAASYFDGLPEQKIEQITMRNVSVSFAGQAK------CDVPIMSNGV 477
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 179/370 (48%), Gaps = 54/370 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + A L S D+ + + + G D
Sbjct: 100 GGGTVIVPKGTFYTGPITLKSNVNFHVEEGATLKFSTDQSLY--FPGVITRWEGLDCYNA 157
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
R LI+ T++ ITG GTIDGQG E WW R
Sbjct: 158 R--PLIYAYGETNIAITG-KGTIDGQGSKETWWPMCGAPRYGWKEGMVAQRNGGRERLLM 214
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP L+ + + I ++TL+NSP W +HP++ S+ V+G+
Sbjct: 215 YGETSTPIYKRVMKPEDGLRPQLVNLYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGV 274
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 275 KVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRN 332
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
+ V+ +GSE+SGG +++ E+ + + + + +RIKT+ RGG +++V+VR +
Sbjct: 333 CFMKNGHGGVV-IGSEISGGYRNLYVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNV 391
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
T+ + A I Y + D PV++N++ +++ E + + G+ D
Sbjct: 392 TVGQCREAVLRINLQYENR--EKCDRSFPPVVRNVHLKNVTCEKSKLGILIIGLDDDKH- 448
Query: 406 GICISNVTIE 415
+SNV++E
Sbjct: 449 ---VSNVSVE 455
>gi|386820345|ref|ZP_10107561.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386425451|gb|EIJ39281.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 514
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 196/401 (48%), Gaps = 52/401 (12%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FGG+GDG T NT+A + AID + GG + PG +L+GS + + + K
Sbjct: 85 VNDFGGIGDGKTINTEAIQKAIDKCAE---NGGGTIAFKPGTYLSGSIFIKKNIHFKIGK 141
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
+ +L SQD ++ I+ R E ++LI +N +V+I G+ G IDGQG++
Sbjct: 142 NVTILGSQDINDYKEIDT-----RVAGIEMKWPAALINVSNQENVIIDGE-GLIDGQGKV 195
Query: 175 WWRKF---RAGELK-----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
+W + R E + RP I I S+NI + +L + + W VH +YS
Sbjct: 196 FWDYYWDLRKNEYEPKGLRWIVDYDAKRPRTILISDSKNIALKDLNIQKAGFWTVHVLYS 255
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ V G+ I + P+TDGI+ DS I++C I DD +K+G D G
Sbjct: 256 EKITVDGLIIKNNIGGHGPSTDGIDIDSSKWVLIQNCDIDCNDDNFCLKAGRDWDGQRVN 315
Query: 279 MPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
PT+ ++IR CI+ A + LGSE +G I+ V +I + + +G+ IK+A+ RGG
Sbjct: 316 RPTEYVVIR--NCIARKGAGLFTLGSETAGSIRHVYVSNIKGLGTSNGLNIKSALTRGGT 373
Query: 338 VKDVYVRRMTMKTMKWAFWITG------SYGSHPDNNYDPHALPV--------------- 376
V+D+ ++ + M ++K I+ SY P+ YD ++P+
Sbjct: 374 VEDISLQNIQMDSVKTFVKISMNWNPSYSYSKLPE-GYDIDSIPIHWKKLLKEVPASKGI 432
Query: 377 --IQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
+NI+ ++ + A ++G+ I +++V IE
Sbjct: 433 PTFKNISLSNIDVKGAEKAMNVKGLENSIIENISLNDVHIE 473
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 192/410 (46%), Gaps = 57/410 (13%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + A GG GD +A A GG + VP G + TG +L S+
Sbjct: 63 REYGAEEGVVGGAGDAIAKAIEACNAG----------GGGTVLVPAGTYHTGPVHLLSNV 112
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
L + + A L S + K++ LP+ + R E YS LI+ T++ +TG GT
Sbjct: 113 NLHVAEGATLKFSTEAKDY-----LPAVFTRWEGVECYNYSPLIYAFEQTNIAVTG-KGT 166
Query: 168 IDGQGEL--W--WRKFRA----------------------------GELKYTRPYLIEIM 195
+DGQ L W W A GE + RP ++
Sbjct: 167 LDGQASLDNWLDWNVKSAPGGSKQIPARNRLIEYGAKGTPVDERVFGEGDFLRPNFLQPY 226
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
N+ I ++T+INSP W +HPV S +V V+G+T+++ N DG NP+S + IE+C
Sbjct: 227 RCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSNNDGCNPESSKDVLIENC 284
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+GDDC+A+KSG + G +P++ +I+R V+ +GSE+SGG+++V E
Sbjct: 285 VFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHGGVV-IGSEISGGVRNVFVE 343
Query: 316 --DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
++++ + + +RIKT RGG +++V+VR + + +K + D
Sbjct: 344 NCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVKDSVIKVNFLYEEGDAG---DF 400
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
PV++N+ R + + A L+G P TGI + + E +P L
Sbjct: 401 APVVRNVVVRRLTSRESKYALFLKGYEHTPITGIRLIDCQFEGVQRPSVL 450
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++V+V
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 179/375 (47%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHFEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++VYV
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 64/375 (17%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VP G + TG L S+ L + AVL S D+ + P + R +
Sbjct: 81 GGGTVIVPKGTFYTGPITLKSNVNFHLEEGAVLKFSTDQSLYFPAV-----LTRWEGIDC 135
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY---------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 136 YNAHPLIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRER 192
Query: 187 ---------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
RP L+ + I I +TL+NSP W +HP++ S+IV
Sbjct: 193 LLMYGETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIV 252
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
G+T+ PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I
Sbjct: 253 SGVTVFN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENII 310
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYV 343
+R + V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++V+V
Sbjct: 311 VRGCMMRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFV 369
Query: 344 RRMTMKTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA 400
R +T+ + A I Y + +D P+++N++ +++ E + + G+
Sbjct: 370 RNVTVGQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLE 425
Query: 401 GDPFTGICISNVTIE 415
D + N+++E
Sbjct: 426 DDKH----VYNISVE 436
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 190/410 (46%), Gaps = 72/410 (17%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG D T + +A + EGG + VP G + TG L S+ L +
Sbjct: 49 NIMDFGAKPD--TPDAPCHEAINQAIMACNQEGGGTVLVPEGTFYTGPITLKSNVNLHVS 106
Query: 114 KDAVLLASQDEKEW-PVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
+ AVL S D+ + P + E L Y LI+ T++ +TG G I
Sbjct: 107 EGAVLKFSTDQDLYFPAVITRWEGLDCYNA---------HPLIYAYGETNIALTG-KGVI 156
Query: 169 DGQG--ELWW-----------------------RKFRAGELKY------------TRPYL 191
DGQG E WW R ELK RP L
Sbjct: 157 DGQGSNENWWYMCGAPRYGWKEGMRSQKLGSRERLMGYAELKRPIYERVMTPEDGLRPQL 216
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
I + I ++TL+NSP W +HP++ S+IV+G+ I PN DG +P+SC N
Sbjct: 217 INFYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN--RGPNGDGCDPESCKNVL 274
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
IE+C +GDDC+A+KSG ++ G + +P++ +++R + V+ +GSE+SGG ++
Sbjct: 275 IENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGGVV-IGSEISGGYRN 333
Query: 312 VRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDN 367
+ ED +DS + +RIKT+ RGG +++V+VR + + A I Y
Sbjct: 334 LYVED-CVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAVLRINLKYEEREQC 392
Query: 368 N--YDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
N +D P ++N++ +++ E G+ D +SNV++E
Sbjct: 393 NRGFD----PTVRNVHLKNVTCEKSRYGIVAIGLDDDKH----VSNVSLE 434
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 40/392 (10%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG GDG + +T A +AA+ G + + G++L+ L S + L + A
Sbjct: 83 FGAKGDGVSDDTAALQAAL-----MACPPGGLVRLEAGRYLSAPLFLKSDMAVELCEGAH 137
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL-------------IFGTNLTDVVITGD 164
+L +D +WPV+ G D EG +++ L +F V
Sbjct: 138 ILGHRDITKWPVLP-----GVLPDAEGVKHTCLGSWEGEADACHAGLFNLLFAQNVQIYG 192
Query: 165 NGTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G +D Q + WW + +A + + RP LI ++ + + + +TL NSPSW VHP++S
Sbjct: 193 RGVMDAQAGFDTWWERPKARFIGW-RPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRG 251
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
+ + I AP SPNTDG+NP+S T+ I GDDC+A+KSG PT+
Sbjct: 252 LTFVDLRIEAPADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSGKISMARRSVRPTR 311
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKD 340
++ I AV+ +GSEM+ G+ D+ + I+++ G+R+KT GRG ++
Sbjct: 312 RVRISNCRMKDGHGAVV-IGSEMACGVYDISVQTCLFINTDRGIRLKTRRGRGREAVIRG 370
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA----------LPVIQNINYRDMVAENV 390
+ R + M+ + AF I Y PD D A P I +I + A V
Sbjct: 371 LNCRHIRMEGVGSAFVINSFYWCDPDGKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGV 430
Query: 391 TMAA-RLEGIAGDPFTGICISNVTIELTNKPK 421
A + G+ P G+ + ++ + + K
Sbjct: 431 RHAGLYVLGLPEQPVDGLTLDHIRLRFDPQAK 462
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 160/329 (48%), Gaps = 27/329 (8%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG GDG T +T A +AAI + +++P G++L L S TL+L K AV
Sbjct: 86 FGAKGDGVTMDTAAIQAAICACPK-----DGTVYLPKGEYLVTPLFLKSDMTLWLDKGAV 140
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDT---------EGGR---YSSLIFGTNLTDVVITGDN 165
+L D +PV LP R D EG Y+SLI + ++ I G
Sbjct: 141 ILGDTDRNHYPV---LPGMTRATDEKSEYNLGTWEGNPLNCYASLITAIDAQNLDIIGP- 196
Query: 166 GTIDGQG--ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
GTIDG WW + + RP+ + ++ Q +++ N+ + NSP W VHP YS +
Sbjct: 197 GTIDGNAGNSDWWVNAKVKRGAW-RPFAMYLVRCQKVRVQNVRVQNSPCWTVHPYYSDDL 255
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ I P SPNTDG++P+SC N + I GDDC+A+KSG + + T+
Sbjct: 256 AFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGDDCMAIKSGKFYMSMEHHKVTEN 315
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDV 341
+IIR +V +GSE++GG+++VR ++ G+RIKT GRG + D+
Sbjct: 316 IIIRNCRFERGHGSV-TVGSEVAGGVKNVRVTQCIFDGTDRGLRIKTRRGRGERSVLDDI 374
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
+ M + F + Y PD + D
Sbjct: 375 LFENIDMNGVHMPFTVNMFYFCDPDGHTD 403
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 196/414 (47%), Gaps = 64/414 (15%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G VGDGTT NT A +AAI R GG + VP G+++TG+ +L L + +
Sbjct: 70 ITQYGAVGDGTTKNTAAIRAAITACHR---AGGGHVLVPAGRFVTGAIHLRGGVDLHVSE 126
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+L S D ++ LP+ R TE YS ++ N V +TG+ G +DGQ
Sbjct: 127 GGILAFSPDPADY-----LPAVLTRWEGTECWNYSPFVYAHNQRGVAVTGE-GILDGQAR 180
Query: 174 L--WWRKFRAGELK--------------------------YTRPYLIEIMYSQNIQISNL 205
W +R G L+ Y RP +++ +++ IS+L
Sbjct: 181 RGPWESWYRTGTLQGPDQRLLRKMGSEGVPVKDRLFGAGHYLRPKMVQFNRCRDVLISDL 240
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T+++ P W VHPV ++V V+ IT+ + + NTDG++P++ I C + DDCVA
Sbjct: 241 TIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHITGCRFNTNDDCVA 298
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAID-- 321
VK+G D+ G G+P++ ++++ + I +GSEMSGG++ V AED I D
Sbjct: 299 VKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGG-ITVGSEMSGGVRRVFAEDCRINPPDFP 357
Query: 322 ----SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT------GSYGSHPDNNYDP 371
+ V +K + RGGFV VYVRR + + ++ G G+HP +
Sbjct: 358 GHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFVNMDYNGGEGGTHPVS---- 413
Query: 372 HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
+++I+ + RL G+ D G+ +++ P + +
Sbjct: 414 -----VRDIHLSHCRIDGARAVLRLVGLETDRLRGVHLAHCDFTGVRGPDAVAF 462
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 203/465 (43%), Gaps = 61/465 (13%)
Query: 10 TQVICIILLVGIIISLNTNG-VESRKARNSDWFEYSAISC----RAHSASLEEFGGVGDG 64
TQ + ++++ ++++ + V +K + FE I R + +FG V
Sbjct: 6 TQKLRLLVVAFALLAVGSRADVPVKKLKVPARFEMPEILVPDFSRVKRFLITDFGAVAGD 65
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
+ A + AID ++ GG ++ VP G+WLTG +L S+ L L K AVLL S+
Sbjct: 66 KEKISGAIRQAIDAANQ---AGGGKVVVPAGEWLTGKVHLKSNVNLHLDKGAVLLFSEKP 122
Query: 125 KEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF---- 179
+++ LP+ + E YS LI+ +V ITG+ G + + E+W F
Sbjct: 123 EDY-----LPAVHSSWEGIECYNYSPLIYAYQCKNVAITGE-GEVRAKMEVWKEWFARPK 176
Query: 180 -----------------------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVH 216
+ + RP I+ +N+ + T+ NSP W +H
Sbjct: 177 PHMESIKRLYNLAQDYTPVEQRQMVNDTAHLRPQFIQFNRCENVLMEGFTVTNSPFWTIH 236
Query: 217 PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276
P +V++ + + A N DG++P+ N I DC GDD +A+KSG + G
Sbjct: 237 PYLCKNVVISRLKVYA--HGHNNDGVDPEMSQNVFITDCVFDQGDDAIAIKSGRNPEGWR 294
Query: 277 YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES---GVRIKTAVG 333
P+K ++IR LT + ++A+GSE+SGGI++V +D + IKT
Sbjct: 295 LKTPSKNIVIRNLT-VKNGHQLVAIGSELSGGIENVDISQCQVVDGAKLNHLLFIKTNER 353
Query: 334 RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHALPVIQNINYRDM 385
GG+VK++Y +T + G G D Y L I +I ++
Sbjct: 354 MGGYVKNIYASNLTAGKID-----LGVLGIETDVLYQWRTLVPTKIRKLTPISDIYLSNI 408
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
++V +R+ G P + + N+T + K++ N D
Sbjct: 409 SVKDVKFESRILGQKELPVKNVSMKNITTGKVQEQKEIHENVLDF 453
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 189/395 (47%), Gaps = 70/395 (17%)
Query: 8 KRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTT- 66
K + +I ++ I ++ N E R S E I+ R + + +FG +
Sbjct: 3 KFSVLILMVFFPLIALADGWNEAEYRAIERS--IEQPKIAER--TVVITKFGAKTTASAV 58
Query: 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
N +A AI +L++ +GG ++ VP GKW TG+ L S L + KDA+L D
Sbjct: 59 QNQQAIHRAIAYLAK---QGGGKVVVPAGKWQTGALRLASGIELVVSKDALLQFVFDRSL 115
Query: 127 WPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW----- 176
+P+++ EG YS I+ DVV++G+ GTIDG G E WW
Sbjct: 116 YPLVKT--------SWEGMMCWNYSPCIYSYGADDVVVSGE-GTIDGGGSNETWWPMCGK 166
Query: 177 ----------------------------------RKFRAGELKYTRPYLIEIMYSQNIQI 202
R+F G+ RP LI + +++
Sbjct: 167 QVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQ--GLRPQLINFVKGNRVRV 224
Query: 203 SNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262
S +TL++SP W +HP+ +V V G+ I PN DG +P++C N I++ + +GDD
Sbjct: 225 SGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHFHTGDD 282
Query: 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
C+A+KSG + G + P++ +IIR ++ +GSE+SGG ++V AED T +DS
Sbjct: 283 CIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIV-IGSEISGGCKNVYAEDCT-MDS 340
Query: 323 ---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +RIKT RGG ++++ +RR+ + K A
Sbjct: 341 PHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEA 375
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 196/421 (46%), Gaps = 41/421 (9%)
Query: 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSH 107
C H+ +G DG T +T A + AI+ + + + G +L+G L S
Sbjct: 24 CDPHA-----YGAKADGKTKDTAAIQKAIE----ICAPKHGTVILKGGTFLSGPLTLRSD 74
Query: 108 FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG---D 164
TL + K A LL S+D ++P+ R+ R +L+ +++++ +TG +
Sbjct: 75 LTLEIDKGATLLGSRDIDDYPL----------REDAKWRRVALLHADHVSNLRVTGGKTE 124
Query: 165 NGTIDGQGELWWRKFR--------AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVH 216
G IDG G+++W R +G Y RP L++I SQ++ ++TL NSP +N+
Sbjct: 125 GGIIDGSGDIFWEMARTHRVPNDTSGSGGYPRPMLVDITESQHLTFDHITLQNSPMYNLT 184
Query: 217 PVYSSSVIVQGITILAPV-TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
+ + + I P T PNTDGI+P S N I I +GDD +A+KSG +
Sbjct: 185 FFFCDGIKIDHTIIRNPAKTGPNTDGIDPFSSKNIEISYVDIDTGDDDIALKSGLVERDP 244
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G P + + I I +++GSE++GGI DVR E+I ++++GVRIK+ RG
Sbjct: 245 KIG-PVEHVYIH--DSIFRHGHGLSVGSELAGGISDVRVENIVMENTDAGVRIKSNRTRG 301
Query: 336 GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMA-- 393
+ D++ + + M + IT Y P D + D+ EN+T
Sbjct: 302 NDIHDLHYKNIQMTGVGQPIQITEYYPKWPAAGTDTAKAVDAHTPRFHDISLENITATGA 361
Query: 394 --ARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPA 451
A + GI P + ++ ++I + K LQ ++T V P E + E A
Sbjct: 362 KDAIIIGIPEYPIQNLTLTKISI---SGEKGLQIRNAEVTMQDVVVKPASGEAIVKEEGA 418
Query: 452 Q 452
+
Sbjct: 419 K 419
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 190/423 (44%), Gaps = 69/423 (16%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +FGG GDG T NT+AF A+ LS+ +GG L VP G +LTG + + L L
Sbjct: 50 SLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDLHLD 106
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A+++ S D+ ++ IE + + + I + ++ ITG+ G IDG GE
Sbjct: 107 KNAIIVLSPDKNDFIKIE--------NGMKDDKATPGINASKRKNISITGE-GIIDGNGE 157
Query: 174 LWWRKFRAGELKYT----------------------------------------RPYLIE 193
WWR + G++ T RP+L+
Sbjct: 158 -WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPHLVR 216
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+N+ + +TL+NSP +++ P ++V++ GIT+ P + N D I+ SC I
Sbjct: 217 FTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQVLII 276
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+ I +GDD + +K+G G+ YG P ++I T + + +GSE SGG++++
Sbjct: 277 NNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMKNIV 334
Query: 314 AEDITAIDSESGVRIKTAVGRGG-----FVKDVYV-----RRMTMKTMKWAFWITGSYGS 363
+++G+R K+AV RGG F+ D+Y+ + +T W + +
Sbjct: 335 VRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIKNEAIVFETTYWDNHVGAKKAT 394
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKL 423
P +P Q+I+ +++ G G I I N I T+K +
Sbjct: 395 AP---IKAEYVPEFQDIHISNIICRGAKTGIAAHGERG-MIHHITIENSCIFYTDKSTDI 450
Query: 424 QWN 426
N
Sbjct: 451 DAN 453
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 172/354 (48%), Gaps = 50/354 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG + VP G + TG L S+ + + AVL S D+ + + + G D
Sbjct: 79 GGGTVVVPKGTFYTGPITLKSNVNFHVEEGAVLRFSTDQSLY--FPGVITRWEGIDCYNA 136
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-----------------------RKFR 180
LI+ T++ ITG GTIDGQG E WW R
Sbjct: 137 H--PLIYAYGETNIAITG-KGTIDGQGSNETWWPMCGAPRYGWKEGMVAQRNGGRERLLM 193
Query: 181 AGELKY------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
GE RP LI + + I ++TL+NSP W +HP++ S+ V+G+
Sbjct: 194 YGETSTPIYKRVMTPEDGLRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGV 253
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+ PN DG +P+SC N IE+C +GDDC+A+KSG +Q G +G+P++ +I+R
Sbjct: 254 YVYN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRG 311
Query: 289 LTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
V+ +GSE+SGG +++ E+ + + D + +RIKT+ RGG +++V+VR +
Sbjct: 312 CYMKKGHGGVV-IGSEISGGYRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNV 370
Query: 347 TMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
T+ + A I Y + N + P ++N++ +++ E + + G+
Sbjct: 371 TVGQCREAVLRINLQYENR--ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGL 422
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 151/275 (54%), Gaps = 19/275 (6%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++++FG GDG ++ +AA++ + +++P G++L L S+ L++
Sbjct: 84 NVKDFGAAGDGVKIDSVCIQAAVNACPK-----DGTVYIPKGRYLCTPVFLKSNIDLWID 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT------EGGR---YSSLIFGTNLTDVVITGD 164
KDAVL+ +D K++P++ + ++ EG +++LI G ++ +V+I G+
Sbjct: 139 KDAVLIGEKDRKKYPILPGMIESSDEKNEYNIGSWEGNPLDCFAALITGLSVENVLIYGE 198
Query: 165 NGTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
G +DG + WW+ + + + RP + + +NI + L ++NSPSW +HP YS +
Sbjct: 199 -GILDGNAGMLDWWKDAKKKNIAW-RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSDN 256
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
++ TI+ P SPNTDG++P+SC N I I GDDC+A+KSG + + P K
Sbjct: 257 LLFLNNTIMNPDNSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPAK 316
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
++IR + + +GSE++ G+ DV E++
Sbjct: 317 NIVIRN-SIFRKGHGSVTIGSEVAAGVYDVSVENV 350
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 31/339 (9%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG +GDG +T +AAI+ + + +P G++LT L S +L+L + AV
Sbjct: 89 FGALGDGKNDDTACIQAAIEACPK-----DGTVRIPKGRYLTRPLFLRSGLSLWLDRGAV 143
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGG------------RYSSLIFGTNLTDVVITGDN 165
LL + +P LP D +GG Y+SL+ G L +V I G+
Sbjct: 144 LLGDPSREHYPR---LPGMTERSDGKGGFNLGSWEGDPETSYASLLTGIELRNVDIFGE- 199
Query: 166 GTIDGQGEL--WWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
GT+DG + WW + + + RP I + + I+I + + NSPSW +HP Y+ +
Sbjct: 200 GTVDGNADRSDWWEEHKTKRGAW-RPRTIFLCRCRCIRIQGVLVRNSPSWTIHPYYTDGI 258
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ +TI P SPNTDG +P+SC + + C I GDDC+A+KSG + ++
Sbjct: 259 SLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKSGKARMAGERRKASRN 318
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG--FVKDV 341
+R + + + +GSE + G+ V A ++ G+R+KT GRG F ++
Sbjct: 319 FALRN-SILERGHGALTIGSEAAAGVYRVEASLCIFSGTDRGLRLKTRRGRGPDCFYDEI 377
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNN----YDPHALPV 376
Y + M+ + F Y D + ALPV
Sbjct: 378 YFHHIRMENVPMPFTFNMFYHCDADGHERYVQSQEALPV 416
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 195/410 (47%), Gaps = 56/410 (13%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A++ S+ + GG GDG TSNT+AF+ AI LS+ GG L VP G +LTG + +
Sbjct: 44 ANTVSILDCGGKGDGITSNTEAFRKAISKLSKL---GGGHLNVPAGIYLTGLISFKDNID 100
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L L K+A+++ S+D+KE+ I+ + T G I + ++ ITG+ G ID
Sbjct: 101 LHLEKNAIIVFSEDKKEF--IKEENGVKDDKATPG------INASKRKNISITGE-GIID 151
Query: 170 GQGELW------------WRKFRA--------GELKY-------------------TRPY 190
G GE W W F+A G+L Y R +
Sbjct: 152 GNGEWWRPVKRSKVSNTEWNDFKAMGGTESAKGDLWYPFNLKHFDNIAATPEAQEKMRTH 211
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
LI + +N+ I +T+ NSP +++ P +VI+ G+T+ P + N D I+ +CTN
Sbjct: 212 LIRLTDCENVLIQGVTVENSPKFHIVPQRCKNVIIDGVTVRCPWNAQNGDAIDIGNCTNV 271
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I + I +GDD + +K G + YG P + I+ + +GSE SGG++
Sbjct: 272 LIVNNVIDAGDDGICMKGGAGAKALEYG-PCLNINIQDNIVYHAHGGFV-IGSEFSGGMK 329
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM--KWAFWITGSYGSHPDNN 368
++ + T +++ +R K++VGRGG +D+Y+ + M + + + T + +H
Sbjct: 330 NIYVHNNTFSGTDTELRFKSSVGRGGTTEDIYISNIYMTDIDNQAIVFETTYFDNHVGAK 389
Query: 369 YDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
V N+ D+ +++ + GIA G+ I +TIE N
Sbjct: 390 KGAQPTKVEFAPNFTDIHMKDIVVRGCKTGIAAHGEKGM-IHGITIENAN 438
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 93/137 (67%)
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
SGWD+YGI YG P+ +IIRR+ + S+ +ALGSEMSGGIQ V A+D+ +S G+R
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVA 387
IKTA GRGG+V+DVY+ +TMK + TG YG HPD+ YDP+AL IQ I ++D++
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 388 ENVTMAARLEGIAGDPF 404
+ + A + GI PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 70/400 (17%)
Query: 4 LKTAKRTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD 63
+K +T ++ ++L+ + N E ++ S + I + +G +
Sbjct: 1 MKKFFKTLLVALLLIPACAWADGWNDAEYQRIEQS--IQLPNIKQATKKYVISAYGAKQN 58
Query: 64 GTTS-NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
+ + N KA I +S+ +GG + +P G W TG+ + S L L + AVL +
Sbjct: 59 ASAAQNQKAINKLIALVSK---KGGGTIVIPKGTWRTGAIEMKSFVELNLEEGAVLQFAF 115
Query: 123 DEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW 176
+ K +P++ E L + YS I+ ++D+ ITG GTIDG G + WW
Sbjct: 116 EPKLYPLVRTAWEGLACWN---------YSPCIYAYKVSDIAITG-KGTIDGGGNNDTWW 165
Query: 177 ---------------------------------------RKFRAGELKYTRPYLIEIMYS 197
RKF G+ RP L+ + S
Sbjct: 166 QWNGNPYFGYKEGVTKEHQKMGSRARLQKMAENGVPFDERKFGMGQG--LRPQLVNFVRS 223
Query: 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257
+ I I ++ +INSP W +HP+ + V G+T+ PN DG +P++C N I++C
Sbjct: 224 ERILIKDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEACENVLIQNCIF 281
Query: 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317
+GDDC+A+KSG + G + P+K +IIR V+ +GSE+SGG ++V AE+
Sbjct: 282 HTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHGGVV-IGSEISGGCENVYAEN- 339
Query: 318 TAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+DS E +RIKT RGG ++++++R++T+ K A
Sbjct: 340 CEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEA 379
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 197/394 (50%), Gaps = 46/394 (11%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHF 108
A+ ++ + G GD T+N F A ++ + +GG + VP G + + G + S+
Sbjct: 39 AYQVNVLKLGAKGDSITNNKAVFDKA---MALCKKKGGGTIIVPKGIYKINGPIHFVSNV 95
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L + K A + S + +++P++ L S+ T YS LI+ + T++ ITG G I
Sbjct: 96 NLKIEKGAKIKFSDNPQDYPLV--LTSW---EGTMLYNYSPLIYAVDCTNIAITGV-GII 149
Query: 169 DGQGELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISN 204
DG+G W+ F+A GE + RP +I+ + +NI + N
Sbjct: 150 DGEGGKIWKSFKAKEGAGKNLSREMNHNNVPVSDRKFGEGYFLRPQMIQFLNCKNILVEN 209
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+ + NSP W +H + S ++ V+GI+ + + N DGI+P+ + IE+ +GDD V
Sbjct: 210 VRIENSPFWCLHLLKSQNITVRGISYKS--LNYNNDGIDPEYAKDVLIENVTFDNGDDNV 267
Query: 265 AVKSGWDQYGIA-YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI-TAIDS 322
A+K+G D G A P++ ++IR VI GSEMS G+Q+V E+ TA
Sbjct: 268 AIKAGRDHEGRANTASPSENIVIRNCNFKGLHGVVI--GSEMSAGVQNVFVENCKTAGYL 325
Query: 323 ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINY 382
+ G+ +KT RGG++K+V+V+ + + ++ +IT +Y + Y I NI++
Sbjct: 326 KRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHGEGE-GYQSD----ISNIHF 380
Query: 383 RDMVAENVTMAA-RLEGIAGDPFTGICISNVTIE 415
++ + + ++G + I ++N+ I+
Sbjct: 381 SNITCNRASESGIVIQGFSDKKIRSISLNNIDIK 414
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 55/342 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ SL +FGG GDG T NT+AF A+ LS+ +GG L VP G +LTG + + L
Sbjct: 47 NRVSLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDL 103
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K+A+++ S D+ ++ IE + + + I + ++ ITG+ G IDG
Sbjct: 104 HLDKNAIIVLSPDKNDFIKIE--------NGMKDDKATPGINASKRKNISITGE-GIIDG 154
Query: 171 QGELWWRKFRAGELKYT----------------------------------------RPY 190
GE WWR + G++ T RP+
Sbjct: 155 NGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
L+ +N+ + +TL+NSP +++ P ++V++ GIT+ P + N D I+ SC
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I + I +GDD + +K+G G+ YG P ++I T + + +GSE SGG++
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMK 331
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
++ +++G+R K+AV RGG +++++ + M +K
Sbjct: 332 NIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 55/342 (16%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ SL +FGG GDG T NT+AF A+ LS+ +GG L VP G +LTG + + L
Sbjct: 47 NRVSLPDFGGKGDGVTMNTEAFGKAMSELSK---KGGGHLDVPAGVYLTGMISFKDNIDL 103
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L K+A+++ S D+ ++ IE + + + I + ++ ITG+ G IDG
Sbjct: 104 HLDKNAIIVLSPDKNDFIKIE--------NGMKDDKATPGINASKRKNISITGE-GIIDG 154
Query: 171 QGELWWRKFRAGELKYT----------------------------------------RPY 190
GE WWR + G++ T RP+
Sbjct: 155 NGE-WWRPVKRGKVSDTEWNRLKAMGGTVTPKGDLWYPFNLTHFSNVADTYETQERYRPH 213
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
L+ +N+ + +TL+NSP +++ P ++V++ GIT+ P + N D I+ SC
Sbjct: 214 LVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSCRQV 273
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I + I +GDD + +K+G G+ YG P ++I T + + +GSE SGG++
Sbjct: 274 LIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFV-IGSEFSGGMK 331
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
++ +++G+R K+AV RGG +++++ + M +K
Sbjct: 332 NIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 181/367 (49%), Gaps = 45/367 (12%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
+T A + AID+ ++ + +PPG++LTG+ L S +L L A L+ SQD ++
Sbjct: 19 STSAIQQAIDN-----AQQNDVIVIPPGRFLTGALFLKSGVSLHLDAGAQLVGSQDLADY 73
Query: 128 PVIEPLPSYGRGRDTEGGRY-SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF-----RA 181
P+I + G D R+ + +I +V ITG GTIDGQG +WW++F R+
Sbjct: 74 PLINTRVA---GIDM---RWPAGIINIIECENVSITG-TGTIDGQGAIWWQRFWGDDERS 126
Query: 182 G--------------ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
G + RP I I SQ I + + T S WN+H YS + V+G
Sbjct: 127 GMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESGFWNMHLCYSRHIEVEG 186
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ I + P+TDGI+ DSC R+E C + DD + +KSG + ++IR
Sbjct: 187 VQI-SNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIR 245
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
C + I LGSE SGGI+ V ED + G RIK+A RGGF++D+ V+ +
Sbjct: 246 --GCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLR 303
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG-DPFTG 406
+ +++ I ++ P +Y + ++R +AA +EG AG +G
Sbjct: 304 LTDVRFPVLIQLNW--FPQYSYGDRGDLADKPEHWR-------KLAAGVEGDAGLTVVSG 354
Query: 407 ICISNVT 413
+ I+N+T
Sbjct: 355 LTINNIT 361
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 63/342 (18%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
++ S+ FG DG NTKA AI + ++GG ++ +P G WLTG L S+ L
Sbjct: 55 YTISIVAFGAQNDGKFLNTKAINEAIKAV---HAKGGGKVVIPEGLWLTGPIELLSNVNL 111
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ ++A++L + D + +P+IE + G +T R S I N ++ ITG GT DG
Sbjct: 112 YTERNAMILFTDDFEAYPIIE---TSFEGLETR--RCQSPISARNAENIAITG-YGTFDG 165
Query: 171 QGELW------------WRKF----------------RAGELK----------------- 185
G+ W W K AG LK
Sbjct: 166 SGDSWRPVKRDKLTVSQWSKLVKSGGVTDAAGKIWYPTAGALKGALACKDFNVPEGINTD 225
Query: 186 --------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ RP L+ I+ S+ + + +T NSPSW +HP+ + + + + P S
Sbjct: 226 EEWDEIRPWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQ 285
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N D ++ +SC N I + +GDD + +KSG D+ G G P + ++++ T +
Sbjct: 286 NGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGG 345
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
+ +GSEMSGG++++ D T + ++ G+R K+ GRGG V+
Sbjct: 346 FV-VGSEMSGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 178/384 (46%), Gaps = 55/384 (14%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G DG+ T AF+AAI +FVP GK+ TG L S+ L+ A
Sbjct: 32 DYGAKNDGSAPATGAFRAAIQAAKAAGG---GTVFVPAGKYTTGPIELVSNLVLYFDAGA 88
Query: 117 VLLASQDEKEWPVIEPLP-SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
V+ E+P + LP R + E LI G+NL +V + G G + E W
Sbjct: 89 VV-------EFPA-QRLPFVKSRQQSIEALTPVPLIGGSNLENVTVAG-RGVLKSNNEDW 139
Query: 176 ---------------------WRKFRAG-ELK-------------YTRPYLIEIMYSQNI 200
W K E+K RP + M S+N+
Sbjct: 140 MKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESRNV 199
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
I L + SP W +H +YS +V+V+ + I+ +TDGI DS N RI +CYI +G
Sbjct: 200 LIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSSRNVRISNCYIDTG 258
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DD + +K+G D G+ PT+ + I + AV +GSE SG ++++ A +IT
Sbjct: 259 DDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAV-TIGSETSGWVRNLVASNITCD 317
Query: 321 DSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY---GSHPDNNYDP--HALP 375
++ GVRIK+ GRGG V+DV TM+ + A IT Y G P N+ +P + P
Sbjct: 318 GTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNRTP 377
Query: 376 VIQNINYRDMVAENVTMAARLEGI 399
V +NI +M + +A +EG+
Sbjct: 378 VFRNIAISNMTVNHARVAIDIEGL 401
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 172/375 (45%), Gaps = 49/375 (13%)
Query: 87 GSQLFVPPGKWLTGSFNLTSH-FTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
G L + PG W TG ++ H + +HKDA ++ +E ++ +P Y R
Sbjct: 33 GGCLSIGPGTWRTGPITISGHDIEVHIHKDAKIVFIPEEGKY-----IPVYSRWEGINCY 87
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWW------------------RKF-------- 179
++ N V I G+ GT+ G G WW ++F
Sbjct: 88 CMHPCLYILNSHRVTIQGE-GTLYGSGHYWWDLSLGKRNLKMEPATETEKRFALLNPGYK 146
Query: 180 ------RAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ ++ RP L+++ S +I + +TL +SP W +HP+YS +++ + ++I P
Sbjct: 147 SQGGGGGGRQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNP 206
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTDGI+ DSC N IE C I GDD +A+KSG GI G PTK + I + T +
Sbjct: 207 KNAPNTDGIDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRN 266
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
+ +GSE + GI +V + ++ G+RIKT GRGG + + + M
Sbjct: 267 AHGGAV-IGSETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLC 325
Query: 354 AFWITGSY--GSHPDNNYDPHALPV------IQNINYRDMVAEN-VTMAARLEGIAGDPF 404
I Y GS + ++ LPV + +I D A ++ A + G+ P
Sbjct: 326 PLTINLYYRCGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPI 385
Query: 405 TGICISNVTIELTNK 419
TG+CI + T L +
Sbjct: 386 TGLCIEDCTFSLDQE 400
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 175/364 (48%), Gaps = 53/364 (14%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVL-LASQ 122
G + N + +A ++ + GG ++ +P G WLTG+ +L + L L K+A L +
Sbjct: 55 GASPNADSTEAIAKAITACHAAGGGRVTIPAGVWLTGAVHLLGNVDLHLAKEATLRFVPE 114
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW---- 176
K PV+ R E YS L++ +V ITG GT+DG + WW
Sbjct: 115 PAKYLPVV-----LTRYEGIECMNYSPLVYAFEQENVAITG-AGTLDGSASSQNWWAWNE 168
Query: 177 ----------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
R F AG + RP IE +N+ I +T++
Sbjct: 169 RAPDKPALQAADRKQLDQQGADGTPVAQRIFGAGH--FLRPSFIEPYRCKNVLIEGVTIV 226
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP W +HP ++V V+G+T+ + T N DG +P+SC + IEDC +GDDC+A+KS
Sbjct: 227 NSPMWEIHPTLCTNVTVRGVTVHSLGT--NNDGCDPESCHDVLIEDCTFQTGDDCIAIKS 284
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESG 325
G + G G+ + +IIRR T V +GSE+SGG+++V D +DS +
Sbjct: 285 GRNNDGRRVGVAAENIIIRRCTMKDGHGGV-TIGSEVSGGVRNVFVSDCQ-MDSPRLDRA 342
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDM 385
R K+ RGG ++++ V + +K + A + + + + P PV++++ ++
Sbjct: 343 FRFKSNAVRGGEIENIQVSQ--VKIGRVARAVLSVEFDYEEGAHGPE-RPVLRHVRIENV 399
Query: 386 VAEN 389
AE+
Sbjct: 400 TAES 403
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 56/337 (16%)
Query: 55 LEEFGGVGDGTTS-NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +FG T + N KA AI SR +GG ++ VP G+WLTG+ L S L +
Sbjct: 47 ITDFGASVRATAARNQKAINRAIATCSR---QGGGRVVVPRGEWLTGAIRLQSRVNLVVE 103
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG- 172
+ A L + D +P+++ E YS I+ TDV +TG GT+DG G
Sbjct: 104 EGATLEFAFDPALYPLVKT-----SWEGLECWNYSPCIYAYQATDVGLTG-RGTVDGNGS 157
Query: 173 -ELWW-------RKFRAGELKYT------------------------------RPYLIEI 194
+ WW F AG+ K RP L+
Sbjct: 158 RDTWWPMCGAAKYGFVAGQTKEAQSLGARAQLLKMAEDGVPADERRFGMGRGLRPQLVNF 217
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
I + LTL NSP W +HP+ S+++ V G+T+ PN DG +P++C+N I++
Sbjct: 218 NACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEACSNVLIQN 275
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRA 314
C +GDDC+A+KSG + G + P++ +IIR V+ +GSE+SGG ++V A
Sbjct: 276 CTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHGGVV-IGSEISGGCRNVFA 334
Query: 315 EDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTM 348
ED +DS + +RIKT RGG ++++ +R +T+
Sbjct: 335 EDCH-MDSPHLDRVLRIKTNNCRGGVIENINMRNVTV 370
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 56/415 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G + T+ +KA AI+ + GG + +P G+WLTG +L S+ L L K
Sbjct: 55 ITDYGALQGNQTATSKAITTAIEKAHKL---GGGIVVIPAGEWLTGKIHLKSNVNLHLDK 111
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A+LL S++ ++ LP+ + E YS LI+ ++ ITG G I + +
Sbjct: 112 GALLLFSENPADY-----LPAVHSSWEGMECYNYSPLIYAYECKNIAITGQ-GEIKAKMD 165
Query: 174 LW--W-------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLT 206
+W W ++ + + RP I+ S+N+ + ++
Sbjct: 166 VWETWFTRPKPHMESIKRLYNLASAYTPLEQRQMVNDTAHLRPQFIQFNRSENVLLEGIS 225
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
+ NSP W +H S ++I++ + + A N DG++P+ N IE+C GDD +A+
Sbjct: 226 ITNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAI 283
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---E 323
KSG + G P+K +IIR T + +IA+GSE+SGGI++V + +D
Sbjct: 284 KSGRNPEGWRLKAPSKNIIIRNCT-VKNGHQLIAIGSELSGGIENVFVDSCVVMDGAKLN 342
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHALP 375
+ IKT GG+V+++Y + ++ G G D Y L
Sbjct: 343 HLLFIKTNERMGGYVRNIYASNLQAGRIE-----LGILGIETDVLYQWRNLVPTVERRLT 397
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430
I+++ ++ A+NV +R+ G P I + NV + + K + N +
Sbjct: 398 PIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNVEGKTVEEEKHIHENVLNF 452
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 186/402 (46%), Gaps = 57/402 (14%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+F V D T+ +T+A + AID + G + +P G++LTG+ L S TL L KDA
Sbjct: 8 DFDAVPDATSLSTQAIQRAIDSAAE-----GDTVLIPAGRFLTGALFLKSKMTLELAKDA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VLL SQ +++P I + G D + + + N V +GT+DGQG +WW
Sbjct: 63 VLLGSQQLEDYPEIATRVA---GIDMV---WPTAMLNINQCRNVTVCGSGTLDGQGAVWW 116
Query: 177 RKF-----RAGEL-KYTR-------------PYLIEIMYSQNIQISNLTLINSPSWNVHP 217
KF +G L YTR P + + S+ + + + T +S WN+H
Sbjct: 117 HKFWGDDENSGMLADYTRRGLRWVVDYDCRRPRNLVVYQSECVTLQDFTSKDSGFWNLHV 176
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
YS V +Q + ++ T +TDGI+ DS R+E C + DD + VKSG
Sbjct: 177 CYSKQVNLQRLNVM-NATGTSTDGIDIDSSQLVRVEGCTVSCNDDNICVKSGRGAEAQQL 235
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
+ +IIR T + + I LGSE SGGI++V E + G RIK+A RGG+
Sbjct: 236 ARTARDIIIRDCTLLK--GSGITLGSETSGGIENVIIEHNRFSGTGVGFRIKSARNRGGW 293
Query: 338 VKDVYVRRMTMKTMKWAFWI------TGSYGSHPDNNYDPH-------------ALPVIQ 378
+K++ VR + M+ + + F + SY P + P L ++
Sbjct: 294 IKNIIVRHLIMEDVGYPFMLQLNWFPQYSYSEQPADTEQPSYWRKLAAGVTGDAGLTRVE 353
Query: 379 NINYRDMVAE-----NVTMAARLEGIAGDPFTGICISNVTIE 415
NI + + + A +EG +P + S++T++
Sbjct: 354 NIRISHISSSLTQPTTFSRAFFIEGTPENPIEQLSFSDITLQ 395
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 132/225 (58%), Gaps = 9/225 (4%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD----TEGG 145
++ P K S L S+ TL K ++AS +E ++ ++ LPSY RD ++
Sbjct: 55 VYFPAEKIEIASLELRSNLTLNFPKGCEIIASANEDDYQIMPTLPSYCIARDGLAASKDA 114
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNL 205
Y S+ +G N+ +VV TG+ G I+G+G WW + + LK+ RP L + ++ +N +I L
Sbjct: 115 LYRSVFYGENVENVVFTGE-GLINGEGVNWWTR-NSQNLKFERPRLFQCLFCKNFKIEKL 172
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T NSP W +H VYS ++ + + ILA S NTDGI+ DS +N I D ++ GDD +A
Sbjct: 173 TWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDGIDIDSSSNVHIHDVFVDVGDDVIA 232
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
+KSG+D G +GMPTK +++ I + A+GSEMSGG+Q
Sbjct: 233 LKSGFDFCGREFGMPTKNVLVENSVFI---NENFAIGSEMSGGVQ 274
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 178/390 (45%), Gaps = 44/390 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFL 112
SL FG GDG AF A + R GG+ + VP G++L G + S+ L L
Sbjct: 30 SLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNVCLEL 86
Query: 113 HKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ A L +S+ P+++ T YS I+G L +V I G G IDG
Sbjct: 87 QEGATLKFSSEPAFYLPLVKT-----SWEGTFLQNYSPFIYGYQLENVSIIG-KGVIDGN 140
Query: 172 GELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTL 207
+ +++ GE + RP+L++ +NI I ++ +
Sbjct: 141 AGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVFI 200
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
N+P W +H + S ++I +GI A + N DGI+P+ N IE+ +GDD VA+K
Sbjct: 201 TNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEYTRNLLIENIEFNNGDDNVAIK 258
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGV 326
G D G P++ +IIR C + LGSEMS GIQ V E+ T + G+
Sbjct: 259 CGRDNDGWKTSCPSENIIIR--NCKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 316
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
IKT RGGF++D+YV ++ F++T Y D H + +I +D+
Sbjct: 317 FIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGE---GMDNHHFTEVHDIYVKDLK 373
Query: 387 AENVTMAAR-LEGIAGDPFTGICISNVTIE 415
+ V +AA L+G P + NV ++
Sbjct: 374 CKKVNVAALVLQGTEAKPIYNVTFDNVDVD 403
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 178/390 (45%), Gaps = 44/390 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFL 112
SL FG GDG AF A + R GG+ + VP G++L G + S+ L L
Sbjct: 52 SLISFGAKGDGKKDCKPAFDKA---MKRAAHMGGAHIVVPAGEYLLNGPIHFVSNVCLEL 108
Query: 113 HKDAVL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
+ A L +S+ P+++ T YS I+G L +V I G G IDG
Sbjct: 109 QEGATLKFSSEPAFYLPLVKT-----SWEGTFLQNYSPFIYGYQLENVSIIG-KGVIDGN 162
Query: 172 GELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTL 207
+ +++ GE + RP+L++ +NI I ++ +
Sbjct: 163 AGTTFATWKSKQKIGQQLSREMNHKEVPVAERNFGEGYWLRPHLVQFFDCKNITIEDVFI 222
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
N+P W +H + S ++I +GI A + N DGI+P+ N IE+ +GDD VA+K
Sbjct: 223 TNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEYTRNLLIENIEFNNGDDNVAIK 280
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGV 326
G D G P++ +IIR C + LGSEMS GIQ V E+ T + G+
Sbjct: 281 CGRDNDGWKTSCPSENIIIR--NCKFKGLHGVVLGSEMSSGIQHVFVENCTYGGYCKRGI 338
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386
IKT RGGF++D+YV ++ F++T Y D H + +I +D+
Sbjct: 339 FIKTNPDRGGFIRDIYVNNCEFGEVEDLFYVTSMYAGE---GMDNHHFTEVHDIYVKDLK 395
Query: 387 AENVTMAAR-LEGIAGDPFTGICISNVTIE 415
+ V +AA L+G P + NV ++
Sbjct: 396 CKKVNVAALVLQGTEAKPIYNVTFDNVDVD 425
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 184/409 (44%), Gaps = 59/409 (14%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG G +T A + AI ++ L +P G++LTGS L S TL L A
Sbjct: 8 DFGADPSGRQVSTAAIQRAI-----AKTGHNDTLVIPAGRFLTGSLFLKSGMTLHLEAGA 62
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGT-NLTDVVITGDNGTIDGQGELW 175
LL SQ ++P+I+ + G D R+ + I N DV ITG GTIDGQG +W
Sbjct: 63 QLLGSQSLDDYPLIDTRVA---GIDM---RWPAAIINIINCHDVSITG-GGTIDGQGLVW 115
Query: 176 WRKF-------------RAGELKYT------RPYLIEIMYSQNIQISNLTLINSPSWNVH 216
W++F A L++ RP I + S+ I + + T S WNVH
Sbjct: 116 WQRFWGDDEQGGMLGDYSARGLRWVVDYDCQRPRNILVYESERITLRDFTSRESGFWNVH 175
Query: 217 PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276
YS + + + I + P+TDGI+ DSC R+E C + DD + +K+G Q +
Sbjct: 176 LCYSRHITLDSVQI-SNSAGPSTDGIDIDSCEQVRVERCVVSCNDDNICIKAGRGQEAAS 234
Query: 277 YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+ ++IR C + I LGSE SGGI+ V E + G RIK+A RGG
Sbjct: 235 KARSARDIVIR--DCTPNSGSGITLGSETSGGIERVLIEHNRFNGTGVGFRIKSARNRGG 292
Query: 337 FVKDVYVRRMTMKTMKWAFWI------TGSYGSHPDNNYDPHALP--------------- 375
F++D+ VR + + +++ I SYG D P
Sbjct: 293 FIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYGERGDLTDKPDHWRKLADDVQGEAGLTHV 352
Query: 376 ---VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPK 421
++NI+ R + + A +EG P + + +++V I+ + K
Sbjct: 353 SNLTLENISARRSESSVFSRAFFIEGYPDRPVSALTLASVVIDASEFGK 401
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGG+ +V AEDI DS S +RIKT+ GRGG+V++VY+ MT+ + A TG YG H
Sbjct: 1 MSGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEH 60
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PD YDP ALP+I+ I +D++ ENV A ++GI G F IC+SN+++ +++ K+
Sbjct: 61 PDEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLNVSS---KVP 117
Query: 425 WNCTDITGISSGVTPKPCELLPDH-EPAQTTECNFPDNRL 463
WNC+D+ G S V+P+ CE L + P ++C N+L
Sbjct: 118 WNCSDVKGYSDLVSPEVCEPLKERIFPEHWSDCYKLPNQL 157
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 173/380 (45%), Gaps = 67/380 (17%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
N KA AI S +GG + VP G W TG+ L SH L + + A L +
Sbjct: 47 AAQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEP 103
Query: 125 KEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-- 176
+P++ E L Y YS I+ TD+ ++G GTIDG G + WW
Sbjct: 104 DLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAW 153
Query: 177 -----------------------------------RKFRAGELKYTRPYLIEIMYSQNIQ 201
K + G+ + RP LI M+ + I
Sbjct: 154 NGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERIL 213
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
I ++ ++NSP W +HP+ S ++ V + I PN DG +P++C N I++C +GD
Sbjct: 214 IRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGD 271
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITA 319
DC+A+KSG + G +G P+K +IIR V+ +GSE+SGG ++V AED + +
Sbjct: 272 DCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDS 330
Query: 320 IDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQN 379
+ E +RIKT RGG ++++ +R + + K A + + P P ++N
Sbjct: 331 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 389
Query: 380 INYRDMVAENVTMAARLEGI 399
+N ENVT G+
Sbjct: 390 VN-----MENVTCGKSEYGV 404
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 173/380 (45%), Gaps = 67/380 (17%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
N KA AI S +GG + VP G W TG+ L SH L + + A L +
Sbjct: 77 AAQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEP 133
Query: 125 KEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-- 176
+P++ E L Y YS I+ TD+ ++G GTIDG G + WW
Sbjct: 134 DLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAW 183
Query: 177 -----------------------------------RKFRAGELKYTRPYLIEIMYSQNIQ 201
K + G+ + RP LI M+ + I
Sbjct: 184 NGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGRGLRPQLINFMHCERIL 243
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
I ++ ++NSP W +HP+ S ++ V + I PN DG +P++C N I++C +GD
Sbjct: 244 IRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGD 301
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITA 319
DC+A+KSG + G +G P+K +IIR V+ +GSE+SGG ++V AED + +
Sbjct: 302 DCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDS 360
Query: 320 IDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQN 379
+ E +RIKT RGG ++++ +R + + K A + + P P ++N
Sbjct: 361 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 419
Query: 380 INYRDMVAENVTMAARLEGI 399
+N ENVT G+
Sbjct: 420 VN-----MENVTCGKSEYGV 434
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 172/351 (49%), Gaps = 40/351 (11%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY-S 148
+ +P G++LTG+ L S +L L A L+ SQD ++P+I + G D R+ +
Sbjct: 36 IVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADYPLINTRVA---GIDM---RWPA 89
Query: 149 SLIFGTNLTDVVITGDNGTIDGQGELWWRKF-----RAG--------------ELKYTRP 189
+I + +V ITG GTIDGQG +WW++F R+G + RP
Sbjct: 90 GIINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRP 148
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
I + SQNI + + T S WN+H YS + V+ + I + P+TDGI+ DSC
Sbjct: 149 RNILVFESQNILLRDFTSRESGFWNIHLCYSRRIAVEAVQI-SNSAGPSTDGIDVDSCEQ 207
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
RIE C + DD + +KSG + + ++IR C + I LGSE SGGI
Sbjct: 208 VRIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGI 265
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY 369
+ V ED + G RIK+A RGGF++D+ V+ + + +++ I ++ P +Y
Sbjct: 266 ERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLIQLNW--FPQYSY 323
Query: 370 DPHALPVIQNINYRDMVAENVTMAARLEGIAG-DPFTGICISNVTIELTNK 419
+ N D +A +EG AG +G+ I N+T ++K
Sbjct: 324 GDQS-------NLSDKPEHWRKLAEGVEGEAGLTEVSGLTIKNMTARRSDK 367
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 191/433 (44%), Gaps = 60/433 (13%)
Query: 41 FEYSAISC----RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK 96
FE AI + S+ +FG V ++A AI S+ GG + +P G+
Sbjct: 37 FEMPAIKIPDFSKCKEFSIVDFGAVQGNKNKTSEAINKAI---SKANKAGGGVVVIPEGE 93
Query: 97 WLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTN 155
WLT + S+ L L+K AVLL S+ ++ LP+ + E YS LI+
Sbjct: 94 WLTKKIHFKSNVNLHLNKGAVLLFSETPDDY-----LPAVNSTWEGYECYNYSPLIYAYK 148
Query: 156 LTDVVITGDNGTIDGQGELWWRKF---------------------------RAGELKYTR 188
++ ITG+ G + + ++W F + + R
Sbjct: 149 CKNIAITGE-GELKAKMDIWKEWFARPKAHMESLKRLYFLASYNKPMKERQMVNDSAHFR 207
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P I+ +NI + +T+ NSP W +HP S V+++ + + A N DG++P+
Sbjct: 208 PQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYA--HGHNNDGVDPEMSQ 265
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N IE+C GDD +A+KSG +Q +K +++R T + ++A+GSE+SGG
Sbjct: 266 NVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCT-VKNGHQLVAIGSELSGG 324
Query: 309 IQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP 365
I++V ++ T +D + IKT RGG+V ++Y+ + + G G
Sbjct: 325 IENVFIDNCTVVDGAKLNHLLFIKTNERRGGYVSNIYMSNIVSGKID-----AGILGIDT 379
Query: 366 DNNYD--------PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
D Y L I+NI ++ A NV +++ G P I + NVT+++
Sbjct: 380 DVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVV 439
Query: 418 NKPKKLQWNCTDI 430
+ + N +
Sbjct: 440 QGDQNIHENVLNF 452
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 190/405 (46%), Gaps = 56/405 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ ++ +FG D T +A + + GG + VP G + TG L S+
Sbjct: 46 QTYNITDFGAKPDNETE--PCHEAINQAILKCSLAGGGTVVVPQGTFYTGPITLKSNVNF 103
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
L + A+L ++ + + + G D R LI+ T++ ITG GTIDG
Sbjct: 104 HLQEGAILKFLTNQSLY--FPGVITRWEGLDCYNAR--PLIYAYGETNIAITGK-GTIDG 158
Query: 171 QG--ELWW-----------------------RKFRAGELKY------------TRPYLIE 193
QG E WW R GE RP LI
Sbjct: 159 QGSNETWWPMCGAPKYGWKEGMVAQRNGGRERLLMYGETSTPVYKRIMTPEDGLRPQLIN 218
Query: 194 IMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253
+ + I ++TL+NSP W +HP++ S+IV+G+ I PN DG +P+SC N IE
Sbjct: 219 LYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPESCKNVLIE 276
Query: 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVR 313
+C +GDDC+A+KSG + G + +P++ +I+R + V+ +GSE+SGG +++
Sbjct: 277 NCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVV-IGSEISGGYRNLF 335
Query: 314 AED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYD 370
E+ + + + + +RIKT+ RGG +++V+VR +T+ + A I Y + N
Sbjct: 336 VENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCREAVLRINLQYENREQCNRG 395
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P ++N++ +++ + + + G+ D + N+++E
Sbjct: 396 --FTPTVRNVHLKNVTCQKSRLGVLIIGLDDDQH----VYNISVE 434
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 183/392 (46%), Gaps = 53/392 (13%)
Query: 64 GTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123
G N + KA + ++ GG ++ VP G W TG +L S+ L L K+AVL D
Sbjct: 67 GAKQNQRCDKAITEAIAACHKAGGGRVVVPEGVWSTGPVHLKSNVNLHLQKNAVLSFVTD 126
Query: 124 EKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ--GELWW---- 176
+ + LP + R E +S LI+ ++ +TG+ G ++G GE WW
Sbjct: 127 PQAY-----LPEVFTRWEGVELMGFSPLIYAYQQQNIAVTGE-GILEGNASGENWWPWKG 180
Query: 177 -----------------------RKFRAG---ELKYT-----RPYLIEIMYSQNIQISNL 205
AG E +Y RP I+ + + I +
Sbjct: 181 VWKHTPWKLDPATDQKPGRDQLFAMAEAGVPVEKRYLDNNRLRPPFIQPYGCERVLIEGV 240
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
T+ NSP W ++PV V+++G+ ++ PN+DG +P+SC IE+C +GDDC+A
Sbjct: 241 TIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESCQRVLIENCLFDTGDDCIA 298
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE--DITAIDSE 323
+KSG + G P +Q++I+ S V+ +GSE+SGG + + A +++ + E
Sbjct: 299 LKSGRNAEGRRLATPIQQVVIQDCLMKSGHGGVV-IGSEISGGAKQIFARRCRMSSPNLE 357
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYR 383
G+RIKT RGG ++ + V + + +K A I Y N+ LP ++++
Sbjct: 358 RGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDAGNF----LPEVKDLKIS 413
Query: 384 DMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
+ + A + G+ +GI +S+V+ E
Sbjct: 414 NFRVKKAQRAFEIRGLPRAGISGIQMSDVSFE 445
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 61/404 (15%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S + +FG DG +NT+AF AAI GG ++ V G +L+G +L S+ L
Sbjct: 87 SFDVRDFGAKADGKHNNTQAFAAAIKAC---HDAGGGKVVVAGGDYLSGPIHLLSNINLH 143
Query: 112 LHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+ + A +L D + LP+ + R E YS LI+ T++ ITG G +DG
Sbjct: 144 VAEGARILFITDPSAY-----LPAVFTRWEGMELMGYSPLIYAYGQTNIAITG-KGVLDG 197
Query: 171 QGE--LWWRKFRAGELK---------------------------------------YTRP 189
Q WW ++ G K Y RP
Sbjct: 198 QANRTTWW-PWKGGAWKGGTDWSMPGVPTQDAARDKLMQDMENGVPVAERMYADGAYLRP 256
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
I+ +N+ I +T+ N+P W ++PV +V V G+ ++ PN+DG +P+SC N
Sbjct: 257 PFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPESCKN 314
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
I++C +GDDC+A+KSG + G PT+ ++I V+ +GSE+SGG+
Sbjct: 315 VVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHGGVV-IGSEISGGV 373
Query: 310 QDVRAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDN 367
++V E ++++ + + G+RIKT RGG +++ ++R +T+ + A I Y
Sbjct: 374 RNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDYEEGDAG 433
Query: 368 NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
+ P ++NI+ R++ EN ++ G P + ++N
Sbjct: 434 KF----TPTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTN 473
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 192/418 (45%), Gaps = 74/418 (17%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
+N KA I S+ +GG + +P G + TG+ + SH L + + A L + +
Sbjct: 58 AAANQKAINRVIAMASK---KGGGNVIIPKGTYSTGAITMLSHVNLVVEEGATLHFAFEP 114
Query: 125 KEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW-- 176
K +P++ E L + YS I+ TD+ ITG GTIDG G + WW
Sbjct: 115 KLYPLVRTSWEGLACW---------NYSPCIYAYKATDIAITG-KGTIDGGGSNDTWWPM 164
Query: 177 -------------------------------------RKFRAGELKYTRPYLIEIMYSQN 199
RKF G+ RP LI + S+N
Sbjct: 165 NGNPKFGYKPGITKESQKLGSRAKLMKMAENDVPFDERKFGMGQG--LRPQLINFVRSEN 222
Query: 200 IQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS 259
I I ++TL+ SP W +HP+ ++ V G+ I PN DG +P++C N I++ +
Sbjct: 223 ILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEACENVIIQNTLFHT 280
Query: 260 GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--I 317
GDDC+A+KSG + G +G P+K +IIR V+ +GSE+SGG ++V AE+ +
Sbjct: 281 GDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAENCYM 339
Query: 318 TAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHA--L 374
+ + E +RIKT RGG ++++ +R + + K A I Y +NN D +
Sbjct: 340 DSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY----ENNEDCYRGFE 395
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAG-DPFTGICISNVTIE-LTNKPKKLQWNCTDI 430
P ++N+N ++ E + G+ D I + N T + +P K+ D+
Sbjct: 396 PTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGVIKQPVKVTGRTKDV 453
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 65/337 (19%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
N +A AI +L++ GG ++ V GKW TG+ LTS L + KDA+L D
Sbjct: 59 AAQNQQAIHRAIAYLAKL---GGGKVVVLAGKWQTGALRLTSGIELVVSKDALLQFVFDR 115
Query: 125 KEWPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW--- 176
+P+++ EG YS I+ DVV++G+ GTIDG G E WW
Sbjct: 116 SLYPLVKT--------SWEGMMCWNYSPCIYSYGADDVVVSGE-GTIDGGGSNETWWPMC 166
Query: 177 ------------------------------------RKFRAGELKYTRPYLIEIMYSQNI 200
R+F G+ RP LI + +
Sbjct: 167 GKQVFGYVKGVTKEAQVSGSRRRLQQFAEDDVPWDERRFGLGQ--GLRPQLINFVKGNRV 224
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
++S +TL++SP W +HP+ +V V G+ I PN DG +P++C N I++ + +G
Sbjct: 225 RVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHFHTG 282
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI 320
DDC+A+KSG + G + P++ +IIR ++ +GSE+SGG ++V AED T +
Sbjct: 283 DDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIV-IGSEISGGCKNVYAEDCT-M 340
Query: 321 DS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
DS + +RIKT RGG ++++ +RR+ + K A
Sbjct: 341 DSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEA 377
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 190/401 (47%), Gaps = 33/401 (8%)
Query: 44 SAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFN 103
SAIS +H + +FG G +T A + AI+ + S G + P G++L+G+
Sbjct: 13 SAISA-SHIYDVNKFGADSTGRKPSTHAIQKAIN---KAASNNGGTVHFPHGQYLSGAIE 68
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
L S+ L D VL D KE+P + G+ + + ++ LI + ++ I G
Sbjct: 69 LKSNIILDFADDVVLKFLDDPKEYPPLHKKLPNGKIVNLQ---FTPLIRAFDHINITIRG 125
Query: 164 DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
N +DG GE WW++ TRP ++I + + + + N+T+ +SP +NV+ V
Sbjct: 126 -NAVLDGHGETWWKRMPPPS---TRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDV 181
Query: 224 IVQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
++GI I P PNTDGIN +SC I I +GDDC+A+ +
Sbjct: 182 TIRGIKIRNPANYVDPGPNTDGINVNSCRRVHITGVNISTGDDCIALDANGKG---KTKT 238
Query: 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
PT+ ++I + V ++GS SGG+++V + + G+ IK+ GRGG V+
Sbjct: 239 PTEDVLIEDSHMYAGHGGV-SIGSVTSGGLRNVTVRNCIFNGTNRGLFIKSRRGRGGLVE 297
Query: 340 DVYVRRMTMKTM-KWAFWITGSY-GSHP-----DNNYDP--HALPVIQNINYRDMVAENV 390
D++ + M + K I Y GS P D ++P P I+N+ ++++ ++V
Sbjct: 298 DIHYHNIQMVDLRKEGIAIAAIYNGSDPGLRSRDFYWEPVNETTPFIRNVEFKNIHGDSV 357
Query: 391 TMAARLEGIAGDPFTGICISNVTIE-----LTNKPKKLQWN 426
+ G+ P + +NV IE TN K + N
Sbjct: 358 LNPIFIVGLPESPIENVTFTNVKIESKLDVFTNNTKNVVIN 398
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 174/380 (45%), Gaps = 67/380 (17%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
N KA AI S +GG + VP G W TG+ L SH L + + A L +
Sbjct: 57 AAQNQKAINRAIAVAS---MKGGGSVVVPNGTWNTGAITLKSHVNLVVEEGATLHFVFEP 113
Query: 125 KEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWR- 177
+P++ E L Y YS I+ TD+ ++G GTIDG G + WW
Sbjct: 114 DLYPLVRTAWEGLECYN---------YSPCIYAYGATDIAVSG-KGTIDGGGSNDTWWAW 163
Query: 178 ----KF---------------RAGELKYT-----------------RPYLIEIMYSQNIQ 201
+F RA KY RP LI M+ + I
Sbjct: 164 NGNPRFGYKEGVTTESQRLGSRAQLQKYAEDGVPVEKRKFGKGCGLRPQLINFMHCERIL 223
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
I ++ ++NSP W +HP+ S ++ V + I PN DG +P++C N I++C +GD
Sbjct: 224 IRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEACENVLIQNCTFHTGD 281
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITA 319
DC+A+KSG + G +G P+K +IIR V+ +GSE+SGG ++V AED + +
Sbjct: 282 DCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVV-IGSEISGGCENVYAEDCYMDS 340
Query: 320 IDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQN 379
+ E +RIKT RGG ++++ +R + + K A + + P P ++N
Sbjct: 341 PELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPREACYRGFQPTVRN 399
Query: 380 INYRDMVAENVTMAARLEGI 399
+N ENVT G+
Sbjct: 400 VN-----MENVTCGKSEYGV 414
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 186/390 (47%), Gaps = 57/390 (14%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + ++ G GDG T +T+A + AID + GG K+L+G + S T
Sbjct: 20 AKTCDVKTMGAKGDGVTKDTEAIQKAIDTCTVVTLSGG--------KFLSGPLEIKSGVT 71
Query: 110 LFLHKDAVLLASQDEKEW--------PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L + A+LL S D ++ P + P + N +V I
Sbjct: 72 LDVETGAMLLGSTDRADYKAATLMRQPTVLPF-----------------LHIVNADNVKI 114
Query: 162 TGDNGTIDGQGELWWRKFR----AGEL--KYTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
TG GTIDGQG++WW + AG L + RP + I +S+++ + N+T+ N+ W V
Sbjct: 115 TG-GGTIDGQGKVWWDYVKGAKDAGVLGNDHPRPMGLLIDHSKHVTVENITIQNAGFWQV 173
Query: 216 HPVYSSSVIVQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
P YS ++ + +LAP +PNTDGI+P S ++ +I+ + GDD +A+KSG
Sbjct: 174 VPYYSDYLVFSHLRVLAPQRGAPNTDGIDPFSSSHIKIDHYFSSVGDDNIAIKSGAIN-S 232
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
P++ ++I CI +++GSE++GG+ V AE I+ ++ G+R+K R
Sbjct: 233 PGPDAPSEDIVITD--CIFESGHGLSIGSEIAGGVHHVHAERISFKGTDQGIRVKANRDR 290
Query: 335 GGFVKDVYVRRMTMKTMKWAFWIT---------GSYGSHPDNNYDPHALPVIQNINYRDM 385
G D+ + +TM ++ + I+ G S P PH +I+ ++
Sbjct: 291 GNDTSDLTFKDITMDDVRTSILISEYYPKAMPEGEVASAPITRLTPH----FHDIHIENV 346
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIE 415
+ N A + G+ P T I + NV+I+
Sbjct: 347 KSVNSDWAGVIVGLPESPVTDISLKNVSIQ 376
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 189/407 (46%), Gaps = 56/407 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S S+ +FG NT A AAI + + GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAAIAACA---AAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 111 FLHKDAVLLASQDEKEWPVIEPLP-SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L D VL D K + LP R E YS LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDRKHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 170 GQG--ELWW-------RK-----------------FRAGEL-----------KYTRPYLI 192
G G + WW R+ F E + RP I
Sbjct: 176 GNGAVDAWWPWKGDWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ + + I +T+ NSP W ++PV S VIV+ + ++ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
E+C +GDDC+A+KSG + G P + ++I+ + V+ +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 313 RAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
A +++ + G+RIKT RGG +++VY+R + + ++ A I Y N+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
+P + N++ ++ + A L G P +G+ + +V T
Sbjct: 412 ---MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNT 455
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 196/437 (44%), Gaps = 56/437 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD--GTTSNTKAFKA 74
L + ++ S T G+++ A+ + ++ +C + ++G G NT+AF+
Sbjct: 5 LALSLMASCITLGIQAGTAQAASSVKFPDKTC-----DVTQYGAEGHRLQIALNTEAFQK 59
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AID + + GG + VP G +L L S+ L L KDA ++AS + + E
Sbjct: 60 AIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT- 115
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT------- 187
+ + E G + I + +V ITG GTIDGQG +WW ++R ++ T
Sbjct: 116 ---KYAEAENG-WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRE-NIRATGKKGGTD 169
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI I S N+ + +TL +SPS++V YS V V G IL+P +PNTD I+P
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N RI + YI DD +A+K+ G+ I I I++GSE SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISIGSETSG 286
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS---- 363
G+ +V E+ S G+RIKT G+GG VK++ R M ++ Y +
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 364 ------------------------HPDNNYDPHALPVIQNINYRDMVAENVTMAAR-LEG 398
P+ +D H P N+ ++ + T AA + G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 399 IAGDPFTGICISNVTIE 415
+ P +G NV I+
Sbjct: 407 VPEAPLSGFHFDNVRID 423
>gi|373956691|ref|ZP_09616651.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373893291|gb|EHQ29188.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 474
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 193/398 (48%), Gaps = 52/398 (13%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G V +GTT NT A + AID S ++GG + PGK+LTGS L + L + K
Sbjct: 51 YGAVNNGTTLNTSAIQKAIDACS---AKGGGIVSFAPGKYLTGSIFLKKNVRLQIDKGVE 107
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
LL SQ+ ++P ++ R E ++LI + +V +TG+ G ++ QG+ +W
Sbjct: 108 LLGSQNLDDYPQMDT-----RIAGIEMKWPAALINIIDQENVAVTGE-GLVNAQGKPFWD 161
Query: 178 KFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
K+ +Y RP + I S NI I +TL + W V +YS V
Sbjct: 162 KYWNMRKEYDPKGLRWIVDYDAQRPRTLLISGSSNITIKAITLQQAGFWTVQVLYSKYVT 221
Query: 225 VQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V GI + + P+TDGI+ DS T I++C I DD +K+G D G+ PT+
Sbjct: 222 VDGIIVRNNIDGHGPSTDGIDVDSSTYVLIQNCDIDCNDDDFCLKAGRDWDGLRVNKPTE 281
Query: 283 QLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
++IR CIS ++ LGSE SGGI+ V A +++ + +G+ IK+A RGG V+D+
Sbjct: 282 YVVIRY--CISRAGGGLLTLGSETSGGIRHVLATNLSGNGTGNGLNIKSATTRGGTVEDI 339
Query: 342 YVRRMTMKTMKWAFWITG------SYGSHPDNNYD------------PHALPVIQNI-NY 382
+ + +TM + A IT SY PD YD H P + I +
Sbjct: 340 HFKNITMNNIGNAIQITMNWNPAYSYSKLPD-GYDINTVPAHWKKMLTHVEPAEKGIPTF 398
Query: 383 RDMVAENVTM-----AARLEGIAGDPFTGICISNVTIE 415
+D+ N+ + A G+ G P G SNV IE
Sbjct: 399 KDVYISNINIKGAKKAINAVGMQGHPLVGFHFSNVNIE 436
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 177/391 (45%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT A + AID + + GG + VP G +LT L ++ L L KDA L+AS +E +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVRVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEEAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFG-------TNLTDVVITGDNGTIDGQGELWWRKFR 180
RG D RY+ G + +V I G+ GTIDGQG +WW ++R
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I + N+ I +TL +SPS++V Y+ V + G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ + I T
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTLKQ 274
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE +GG+ +VR E+ T S G+RIK+ G+GG VK++ R M ++
Sbjct: 275 --GRGISIGSESAGGVNNVRVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 354 AFWITGSY----------------------------GSHPDNNYDPHALPVIQNINYRDM 385
+ Y S P +D + P NI ++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 386 VAE-NVTMAARLEGIAGDPFTGICISNVTIE 415
+ + AA + G P +G SNV IE
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIE 423
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 160/341 (46%), Gaps = 62/341 (18%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + ++ +G DG T NTKA AI+ + + GG + VP G W+TG L S+
Sbjct: 275 RKDTFNISRYGAKADGITVNTKAINQAIEICN---AAGGGTVLVPKGLWVTGPIVLKSNV 331
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN--- 165
L L K A+L S++ ++P++ L ++ E R + I+G +L ++ ITG+
Sbjct: 332 NLHLEKGALLQFSKNYDDYPIV--LTTW---EGQESYRCQAPIWGVDLENIAITGEGVLD 386
Query: 166 --------------------------GTIDGQGELWWRKFR---------AGEL------ 184
G +D + W+ + AG +
Sbjct: 387 GGGDAWRAIKREKQTAGQWANLIKSGGVVDEKQNNWYPSEKSLKGNMIPNAGRILNGVKP 446
Query: 185 ---------KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT 235
+ RP ++ + +NI I +T NSP+W +HP+ + V+ + + P
Sbjct: 447 TPEELASYKDFLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWY 506
Query: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295
+ N+D I+ +SC N +E C +GDD + +KSG D+ G G+PT+ +I+
Sbjct: 507 AQNSDAIDLESCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHAH 566
Query: 296 SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+ +GSEMSGG++++ D T + S+ G+R KTA GRGG
Sbjct: 567 GGFV-IGSEMSGGVRNMFISDCTFMGSDVGLRFKTARGRGG 606
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 174/382 (45%), Gaps = 26/382 (6%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
+ NT A ++AI + G L +P G W +G L S TL + + AVL S
Sbjct: 97 SNDNTTAIQSAIAAV-----PAGGTLRLPAGSWTSGPLFLKSDMTLLIEEGAVLQDSGTR 151
Query: 125 KEWPVIEPLPSYGRGRDTEGGR----YSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRK 178
+ ++ GR T G ++SL+ + ++ I G G +DG G+ WW
Sbjct: 152 EGRRILSSRHPEGRVLGTWEGVAEACFASLLNAIDCDNLTICG-QGIVDGGGDRGDWWTW 210
Query: 179 FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+ RP + + +++ I+ +T+ NSPSW VHPV V+ G+TI SPN
Sbjct: 211 PKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAVGLTIRNHPDSPN 270
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
TDG+NP+S N R+ I GDDCVA+K+G PT+ + IR AV
Sbjct: 271 TDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCLMQRGHGAV 330
Query: 299 IALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358
+ +GSEMS GI DV ++ G+RIKT GRGG V + V M+ + +
Sbjct: 331 V-MGSEMSQGISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVN 389
Query: 359 GSYGSHPDNNYD----PHALPV------IQNINYRDM-VAENVTMAARLEGIAGDPFTGI 407
Y D D ALPV I+ I+ R++ V+ T AA G+ +
Sbjct: 390 AFYFCDADGRSDYVQSRTALPVSLTTPKIEGIDIRNLEVSGAETAAAVFYGLPESTIDAV 449
Query: 408 CISNVTIELT--NKPKKLQWNC 427
I ++I + KP + C
Sbjct: 450 SIDGMSIAYSADAKPAVPEMAC 471
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 180/399 (45%), Gaps = 59/399 (14%)
Query: 73 KAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEP 132
+A +D + ++GG ++ +P G+WLTG +L S+ L L + AVLL S + +++
Sbjct: 69 RAIMDAIKEAHAQGGGRVVIPKGEWLTGKIHLKSNINLHLEQGAVLLFSDNPQDY----- 123
Query: 133 LPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW--WRKFRAGELKY--- 186
LP+ + E YS LI+ ++ ITG G + + + W W G +
Sbjct: 124 LPAVHSSWEGLECFNYSPLIYAYKCKNIAITGQ-GELKAKMDTWRSWFDRPPGHMNSLKE 182
Query: 187 ----------------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
RP I+ S+NI + +T+ NSP W +HP S +V
Sbjct: 183 LYHMAANNVPVEQRQMVNDSANLRPQFIQFNRSENILLQGVTITNSPFWVIHPYLSKNVS 242
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
++ +T+ A N DG++P+ N IE+C GDD +AVKSG +Q P K +
Sbjct: 243 IKEVTVFA--HGHNNDGVDPEMSQNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNI 300
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR------IKTAVGRGGFV 338
+I+ I+ ++A+GSE+SGGI+++ + E G + IKT RGG V
Sbjct: 301 VIKNCKIINGHQ-LMAIGSELSGGIENIYMSNCQV---EQGAKLNHLLFIKTNERRGGIV 356
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHALPVIQNINYRDMVAENV 390
++Y M +++ G G D Y L VI+++ D+ AENV
Sbjct: 357 SNIY-----MDSIQAGEIAEGILGIDTDVLYQWRNLVPTYQRELTVIKDVYLSDIHAENV 411
Query: 391 TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTD 429
+++ G P + ++ VT + + N D
Sbjct: 412 AFISKISGQEQVPVKNVVLNRVTADSIRDQSIINQNVLD 450
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 175/384 (45%), Gaps = 49/384 (12%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT+AF+ AID + + GG + VP G +L L S+ L L KDA ++AS +E +
Sbjct: 53 NTQAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT 187
E + + E G + I + +V ITG GTIDGQG +WW ++R ++ T
Sbjct: 110 RATEKT----KYAEAENG-WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRE-NIRAT 162
Query: 188 -------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
RP LI I S N+ + +TL +SPS++V YS V V G IL+P +PNTD
Sbjct: 163 GKKGGTDRPRLIYIKSSNNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTD 222
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
I+P N RI + YI DD +A+K+ G+ I I I+
Sbjct: 223 AIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGIS 279
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
+GSE SGG+ +V E+ S G+RIKT G+GG VK++ R M ++
Sbjct: 280 IGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAY 339
Query: 361 YGS----------------------------HPDNNYDPHALPVIQNINYRDMVAENVTM 392
Y + P+ +D + P N+ ++ + T
Sbjct: 340 YKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTK 399
Query: 393 AAR-LEGIAGDPFTGICISNVTIE 415
AA + G+ P +G NV I+
Sbjct: 400 AAAYIIGVPEAPLSGFHFDNVRID 423
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 194/428 (45%), Gaps = 61/428 (14%)
Query: 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTS 106
S A+ S+ E+GG GDG T NT+AF AI L++ GG L VP G +LTG +L
Sbjct: 40 SIPANHVSILEYGGNGDGLTMNTQAFAKAISKLNKM---GGGHLNVPAGIYLTGLISLKD 96
Query: 107 HFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNG 166
+ L L K+A+++ S+D+ + I+ R T I + ++ ITG+ G
Sbjct: 97 NIDLHLEKNAIIVLSEDKNDHFKIDKTTGKKESRATPA------INASKRKNISITGE-G 149
Query: 167 TIDGQGELW------------WRKFRA---------------------------GELKYT 187
TIDG GE W W++F+ E +
Sbjct: 150 TIDGNGEWWRPVKRSKVSDVEWKEFQTMGGTLNEKGDIWYPFNLKHKPNVAENMDEQEKN 209
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
R ++I +N+ + +TL+NSP +++ P +VI+ GIT+ P + N D I+ SC
Sbjct: 210 RTHMIRFTSCENVLVQGVTLLNSPKFHIIPTRCKNVIIDGITVKCPWNAQNGDAIDISSC 269
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
+ I + I +GDD + +K G P + + I+ T + +GSE SG
Sbjct: 270 KDVLIVNNVIDAGDDGICMKGG-AGAAGVAAGPCENINIQDNTVYHAHGGFV-IGSEFSG 327
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF--WITGSYGSHP 365
G++++ + T +++G+R K+AV RGG +++Y+ + M +K A + T + +H
Sbjct: 328 GMKNIVVRNNTFQGTDTGLRFKSAVKRGGTSENIYIDHIYMTDIKDAAITFETTYFDNHV 387
Query: 366 DNNYDPHALPVIQNI--NYRDMVAENVTMAARLEGIAGDPFTG----ICISNVTIELTNK 419
PV Q N++D+ N+ + GI G I I N I T +
Sbjct: 388 --GAQKQTTPVKQEFLPNFQDIHMSNIYVRGCETGIEAHGAEGMVHDITIKNSNIFYTKE 445
Query: 420 PKKLQWNC 427
K + C
Sbjct: 446 AKNIDAVC 453
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 196/437 (44%), Gaps = 56/437 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD--GTTSNTKAFKA 74
L + ++ S T G+++ A+ + ++ +C + ++G G NT+AF+
Sbjct: 5 LALSLMASCITLGIQAGTAQAASSVKFPDKTC-----DVTQYGAEGHRLQIALNTQAFQK 59
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AID + + GG + VP G +L L S+ L L KDA ++AS +E + E
Sbjct: 60 AIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT- 115
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT------- 187
+ + E G + I + +V ITG GTIDGQG +WW ++R ++ T
Sbjct: 116 ---KYAEAENG-WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRE-NIRATGKKGGTD 169
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI I S N+ + +TL +SPS++V YS V V G IL+P +PNTD I+P
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N RI + YI DD +A+K+ G+ I I I++GSE SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISIGSETSG 286
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHP-- 365
G+ +V E+ S G+RIKT G+GG VK++ R M ++ Y + P
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 366 ----------------DNNYDPHALPVIQNINYRDMVAENVTM-----------AARLEG 398
+ Y P P Y+ NVT+ AA + G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 399 IAGDPFTGICISNVTIE 415
+ P +G NV I+
Sbjct: 407 VPEAPLSGFHFDNVRID 423
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 197/437 (45%), Gaps = 56/437 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD--GTTSNTKAFKA 74
L + ++ S T G+++ A+ + ++ +C + ++G G NT+AF+
Sbjct: 5 LALSLMASCITLGIQAGIAQAASSVKFPDKTC-----DVTQYGAEGHRLQIALNTQAFQK 59
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AID + + GG + VP G +L L S+ L L KDA ++AS +E + E
Sbjct: 60 AIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEEAAYRATEKT- 115
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT------- 187
+ + E G + I + +V ITG GTIDGQG +WW ++R ++ T
Sbjct: 116 ---KYAEAENG-WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRE-NIRATGKKGGTD 169
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI I S N+ + +TL +SPS++V YS V V G IL+P +PNTD I+P
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N RI + YI DD +A+K+ G+ I I I++GSE SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISIGSETSG 286
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY------ 361
G+ +V E+ S G+RIKT G+GG VK++ R M ++ Y
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 362 ----------------------GSHPDNNYDPHALPVIQNINYRDMVAENVTMAAR-LEG 398
+ P+ +D + P N+ ++ + T AA + G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQLFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 399 IAGDPFTGICISNVTIE 415
+ P +G NV I+
Sbjct: 407 VPEAPLSGFHFDNVRID 423
>gi|317505480|ref|ZP_07963398.1| polygalacturonase [Prevotella salivae DSM 15606]
gi|315663393|gb|EFV03142.1| polygalacturonase [Prevotella salivae DSM 15606]
Length = 494
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 193/427 (45%), Gaps = 68/427 (15%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
+ SL +FG V DG T NT+AF+ AI L++ GG L VP G +LTG +L + +
Sbjct: 68 NQVSLTDFGAVPDGITLNTEAFRKAISKLTKL---GGGHLIVPAGIYLTGPISLKDNIDI 124
Query: 111 FLHKDAVLLASQDEKEWPVI---EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
L ++A++L S ++K++ EP P G I + T++ ITG+ GT
Sbjct: 125 HLERNALILFSPNKKDFLKATDNEPQPKVVSG-----------ITASKRTNISITGE-GT 172
Query: 168 IDGQGELW------------WRKFRA--------GELKY-------------------TR 188
IDG G+ W W +++A G+L Y R
Sbjct: 173 IDGNGQWWRPVKRVKMSDVEWNQYKAMGGTITPKGDLWYPFNLKTQENIAPNASEQEKMR 232
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
+LI I N+ I +T+ NSP +++ P ++VIV GIT+ P + N DGI+ +C+
Sbjct: 233 AHLIRITECNNVLIQGVTIQNSPRFHIVPQRCNNVIVDGITVRCPWNAQNGDGIDVGNCS 292
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
N I + GDD + +KSG ++ + I+ T + +GSE+ GG
Sbjct: 293 NVLIVNSTFDVGDDAICMKSGAEKAD-QTNRSCVNINIQNNTVYHGHGGFV-IGSEVIGG 350
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK-------TMKWAFWITGSY 361
++++ + +++G+R K+AVGRGG +D+++ M T + +W
Sbjct: 351 MKNIYVNNNFFSGTDTGLRFKSAVGRGGKTEDIFINNCYMNNILNEAITFETTYWDNHVG 410
Query: 362 GSHPDN-NYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP 420
+ P D +P Q+I+ ++ A G G I I N T T+K
Sbjct: 411 ATQPQKPAKDAEFVPNFQDIHITNVTCRGAKTAIAAHGAPG-MVHDISIENSTFYYTDKA 469
Query: 421 KKLQWNC 427
+ +C
Sbjct: 470 TDIDSSC 476
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 56/407 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S S+ +FG NT A AAI + + GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAAIAACA---AAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 111 FLHKDAVLLASQDEKEWPVIEPLP-SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L D VL D + + LP R E YS LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDREHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 170 GQG--ELWW-------RK-----------------FRAGEL-----------KYTRPYLI 192
G G + WW R+ F E + RP I
Sbjct: 176 GNGAVDAWWPWKGHWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ + + I +T+ NSP W ++PV S VIV+ + ++ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
E+C +GDDC+A+KSG + G P + ++I+ + V+ +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 313 RAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
A +++ + G+RIKT RGG +++VY+R + + ++ A I Y N+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
+P ++N++ ++ + A L G P +G+ + +V T
Sbjct: 412 ---MPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNT 455
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 168/341 (49%), Gaps = 62/341 (18%)
Query: 54 SLEEFGGVGDGTTS-NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112
S+ +FG + + N KA AI S+ +GG ++ VP G+WLTG+ + SH L +
Sbjct: 45 SITQFGASPKASAAKNQKAINRAILMCSK---KGGGRIVVPRGEWLTGAIRMQSHVNLVV 101
Query: 113 HKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG---GRYSSLIFGTNLTDVVITGDNGTID 169
+ A L + + + +P+++ EG YS I+ TDV +TG GTID
Sbjct: 102 EEGATLKFAFEPELYPLVKT--------SWEGIGCWNYSPCIYAYQATDVALTG-KGTID 152
Query: 170 GQG--ELWW-------RKFRAGE-------------LKYT-----------------RPY 190
G G + WW F GE LKY R
Sbjct: 153 GNGSKQTWWPMCGAPRYGFVKGETKEAQNLGSRAQLLKYAENDVPWDQRKFGMGKGLRSQ 212
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
L+ + S I I +L L+NSP W +HP+ S ++ V G+ + PN DG +P++C
Sbjct: 213 LVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVDGVFVQN--DGPNGDGCDPEACDGV 270
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I++C +GDDC+A+KSG + G + P++ +IIR V+ +GSE+SGG +
Sbjct: 271 LIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGHGGVV-IGSEISGGCR 329
Query: 311 DVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTM 348
+V AED +DS + +RIKT RGG ++++ +R +T+
Sbjct: 330 NVFAED-CYMDSPHLDRVLRIKTNNCRGGLIENINMRNVTV 369
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 189/394 (47%), Gaps = 42/394 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G T NT AFK AI ++ GG ++ VP G WLTG L S+ L+L
Sbjct: 65 NITDYGAESGSITKNTDAFKKAITECNKV---GGGRVVVPAGTWLTGPIELKSNVNLYLD 121
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A+++ S + +++ + +++ Y +LI G+NL+++ ITGD G ++G G
Sbjct: 122 SGALVIFSSNPEDYKKTDE-------KNSSSNSYKNLISGSNLSNIAITGD-GVLNGNGA 173
Query: 174 LW------------WRKF--------RAGE--------LKYTRPYLIEIMYSQNIQISNL 205
W W+ F AG + RP L+ + +++ +
Sbjct: 174 FWRPVKKEKVTDSIWKSFVSAGGVLDSAGTTVWPNKQVVNVKRPNLLNLSNCKSVLLDGP 233
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ NSP +N+ S ++IV+ I + NTDGI+ +C N I + + +GDD +
Sbjct: 234 SFENSPQFNIDINSSENLIVRNTKIFNEYWAQNTDGIDISACKNVLIYNDTVNTGDDGIC 293
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+KSG PT + ++ ++ +GS GG++++ + I ++SG
Sbjct: 294 MKSGS-SSKSNNDEPTLENVVIENCIVNHAHGGFVVGSNTDGGMKNIYVHNCNYIGTDSG 352
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPDNNYDPHALPVIQNINYRD 384
+R K+ +G GG V+D+Y+ + MK + A +Y + NN + +P QNI+ +
Sbjct: 353 LRFKSDIGNGGKVEDIYIDGINMKNIVNDAIVFDTNYEAKNTNNT-SNKVPNFQNIHISN 411
Query: 385 MVAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
+ + AA ++G+ P + + N+TI+ TN
Sbjct: 412 VFCDGAQEAANIKGLDAVPVKNLDLKNITIKSTN 445
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 194/454 (42%), Gaps = 82/454 (18%)
Query: 33 RKARNSDWFEY-----SAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGG 87
+ +R +D E+ +A R + S+ +G DG T +T A A++ GG
Sbjct: 245 KPSRFTDKLEFELPKIAAPFFRKDTFSIVRYGAKSDGITLSTPAINQAVNLA---HEAGG 301
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
+ VP G WLTG L S+ L + + A+L S +++P+++ + G D R
Sbjct: 302 GVVVVPSGFWLTGPIVLKSNVNLHISQGALLQFSNKREDFPLVK---TTWEGEDAI--RC 356
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELW------------WRKFRAG------------- 182
+ I +++ ITG G IDG G++W W+K A
Sbjct: 357 QAPISAVEASNIAITG-TGIIDGAGQVWRQVKKDKLTEAQWKKLIASGGVLDEEKRTWYP 415
Query: 183 --------------------------ELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNV 215
E K + RP ++ + + + +T NSP+W +
Sbjct: 416 SENALKGSKIQKPGSIAAGFNLNNCSEFKDFLRPNMVSLSRCTQVLLEGITFQNSPAWTI 475
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP+ + ++ + + P N D ++ +SC N +E C +GDD + +KSG D G
Sbjct: 476 HPLLCEHITLRDVIVRNPWYGQNNDALDLESCRNGLVEGCSFDTGDDGICIKSGRDAEGR 535
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
G+PT+ +I+R T + +GSEMSGG++++ D + ++ G+R KTA GRG
Sbjct: 536 KRGVPTENIIVRNCTVFHGHGGFV-IGSEMSGGVRNLFVSDCNFLGTDVGLRFKTARGRG 594
Query: 336 GFVKDVYVRRMTMKTM-------------KWAFWITGSYGSHPDNNYDP--HALPVIQNI 380
G V+++YV + M + K + G P+ +P P +N
Sbjct: 595 GIVENIYVTDINMTNIPGEAILFDMYYMAKDPVSLNGEKNVLPEMKAEPLGEGTPQFRNF 654
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
+ +++V + + G+ P I I N I
Sbjct: 655 HIKNIVCQGAETGILIRGLPEMPIKNISIENANI 688
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 56/407 (13%)
Query: 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTL 110
S S+ +FG NT A AAI + + GG ++ +P G++ TG+ +L S+ L
Sbjct: 65 RSFSITDFGAAAKAGFDNTAAIAAAIAACA---AAGGGRVLIPGGRFETGAIHLKSNVNL 121
Query: 111 FLHKDAVLLASQDEKEWPVIEPLP-SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L D VL D + + LP R E YS LI+ ++ +TG NG ++
Sbjct: 122 HLADDTVLSFYTDREHY-----LPYVMTRWEGVELMGYSPLIYAYQQENIALTG-NGILE 175
Query: 170 GQG--ELWW-------RK-----------------FRAGEL-----------KYTRPYLI 192
G G + WW R+ F E + RP I
Sbjct: 176 GNGAVDAWWPWKGQWERRNWDYDASVDQVKTRSPLFEMAERGVPVSERVFNENFLRPPFI 235
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ + + I +T+ NSP W ++PV S VIV+ + ++ PN+DG NP+SC I
Sbjct: 236 QPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLI 293
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
E+C +GDDC+A+KSG + G P + ++I+ + V+ +GSE+SGG +++
Sbjct: 294 ENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVV-MGSEISGGARNI 352
Query: 313 RAE--DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD 370
A +++ + G+RIKT RGG +++VY+R + + ++ A I Y N+
Sbjct: 353 FARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEGDAGNF- 411
Query: 371 PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
+P + N++ ++ + A L G P +G+ + +V T
Sbjct: 412 ---MPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNT 455
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 199/444 (44%), Gaps = 81/444 (18%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH-KD 115
++G V D +TKA +AAIDH+S ++GG + +P G++ TG+ L + L L +D
Sbjct: 41 DYGAVPDDGILDTKAIQAAIDHVS---AQGGGMVVIPRGRFDTGAIVLKENVNLHLESED 97
Query: 116 AVLLASQD--EKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
VL ++D + +P++ E P Y +S LI+ ++ +TG G +D
Sbjct: 98 TVLCFTRDIIPENYPLVLAYYEGAPCY---------NWSPLIYANGQDNIAVTG-KGRLD 147
Query: 170 GQGE--LWW---------------------------------RKFRAGELKYTRPYLIEI 194
GQ + WW RK GE + RP I++
Sbjct: 148 GQADQDTWWSWYGDTYIGQDYTRPSSSDVGILRRMVDDGVDVRKRVFGEGHFLRPNFIQV 207
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+ +N+ + +++ N P W V+PV ++V V+GI + N DG NP++C IED
Sbjct: 208 IGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFN--NNDGCNPENCNYVLIED 265
Query: 255 CYIVSGDDCVAVKSGWDQYGIAY---GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
C G D VAVKSG ++ G G + ++IR S IA GSEMSG I+D
Sbjct: 266 CRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGTSG-IAFGSEMSGDIRD 324
Query: 312 VRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGS 363
+ A+D + +R K+ RGG V+ +Y+R +++ + G GS
Sbjct: 325 IYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRYVSIHATMLYDEGWMGS 384
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI-ELTNKPKK 422
+ LP ++I D A T +E P TG+ + +V I ++ ++ +
Sbjct: 385 Y---------LPEYRDIRIEDFTANGGTYGIFMEAFDQVPITGLELVDVDIRDVDHEVRA 435
Query: 423 LQWN--CTDITGISSGVTPKPCEL 444
W + I+ P+P ++
Sbjct: 436 RNWKDPLLEQVRINGHTYPRPVDV 459
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 198/437 (45%), Gaps = 56/437 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD--GTTSNTKAFKA 74
L + ++ S T G+++ A+ + ++ +C + ++G G NT+AF+
Sbjct: 5 LALSLMASCITLGIQAGTAQAASSVKFPDKTC-----DVTQYGAEGHRLQIALNTEAFQK 59
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AID + + GG + VP G +L L S+ L L KDA ++AS + + E
Sbjct: 60 AIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT- 115
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT------- 187
+ + E G + I + +V ITG+ GTIDGQG +WW ++R ++ T
Sbjct: 116 ---KYAEAENG-WLPFISIADAQNVAITGE-GTIDGQGAVWWERWRE-NIRATGKKGGTD 169
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI I S N+ + ++TL +SPS+++ YS V V G IL+P +PNTD I+P
Sbjct: 170 RPRLIYIKSSSNVLVDSVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N RI + YI DD +A+K+ G+ I I I++GSE SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISIGSETSG 286
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGS---- 363
G+ +V E+ S G+RIKT G+GG VK++ R M ++ Y +
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 364 ------------------------HPDNNYDPHALPVIQNINYRDMVAENVTMAAR-LEG 398
P+ +D + P N+ ++ + T AA + G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 399 IAGDPFTGICISNVTIE 415
+ P +G NV I+
Sbjct: 407 VPEAPLSGFHFDNVRID 423
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 34/312 (10%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT++F+ AID + + GG + VP G +L L S+ L L K+A L+AS E +
Sbjct: 50 NTESFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 106
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
R T+ RY+ I + +V ITG+ GTIDGQG +WW ++R
Sbjct: 107 ------------RATDSTRYAEAENGWLPFISIADAQNVAITGE-GTIDGQGAVWWERWR 153
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
A ++ T RP LI + S + I +TL NSPS++V Y+ V V G I+AP
Sbjct: 154 AA-IRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAP 212
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + I DD +A+K+ G+ I +
Sbjct: 213 WHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---VL 269
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE SGG+ +V E+ S G+RIK+ G+GG VK+V R M ++
Sbjct: 270 KQGRGISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEV 329
Query: 354 AFWITGSYGSHP 365
+G Y + P
Sbjct: 330 PLVFSGYYQAAP 341
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 34/312 (10%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT++F+ AID + + GG + VP G +L L S+ L L K+A L+AS E +
Sbjct: 60 NTESFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKNATLVASTGENAY 116
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
R T+ RY+ I + +V ITG+ GTIDGQG +WW ++R
Sbjct: 117 ------------RATDSTRYAEAENGWLPFISIADAQNVAITGE-GTIDGQGAVWWERWR 163
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
A ++ T RP LI + S + I +TL NSPS++V Y+ V V G I+AP
Sbjct: 164 AA-IRATGKKGGTDRPRLIYVTRSNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAP 222
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + I DD +A+K+ G+ I +
Sbjct: 223 WHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---VL 279
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE SGG+ +V E+ S G+RIK+ G+GG VK+V R M ++
Sbjct: 280 KQGRGISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMLDVEV 339
Query: 354 AFWITGSYGSHP 365
+G Y + P
Sbjct: 340 PLVFSGYYQAAP 351
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 46/387 (11%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDA 116
FG GDG AF A + R GG+ + VP G++ L G + S+ L L + A
Sbjct: 53 FGAKGDGKKDCKPAFDKA---MKRAAKSGGAHIVVPAGEYKLNGPIHFVSNVCLELQEGA 109
Query: 117 VL-LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG----- 170
VL A + E P+++ T YS I+G L ++ I G GTIDG
Sbjct: 110 VLKFAPEPEYYLPLVKT-----SWEGTFLQNYSPFIYGYQLENISIIGK-GTIDGNAGST 163
Query: 171 ---------QGELWWRKFRA----------GELKYTRPYLIEIMYSQNIQISNLTLINSP 211
+G+ R GE Y RP LI+ +NI + + + NSP
Sbjct: 164 FATWKSQQKKGQQLSRDMNHNETPVEERNFGEGYYLRPQLIQFFACKNITLEGVFITNSP 223
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W +H + S ++I +G+ A + N DGI+P+ N IE+ +GDD VA+K G D
Sbjct: 224 FWCIHLLKSENIICRGLRYDAKLV--NNDGIDPEFTRNLLIENIEFNNGDDNVAIKCGRD 281
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVRIKT 330
G P++ +IIR C + LGSEMS G+Q+V E+ T + G+ IKT
Sbjct: 282 NDGWTTARPSENIIIR--NCKFKGLHGVVLGSEMSAGVQNVFIENCTYGGYCKRGIYIKT 339
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAFWITGSY-GSHPDNNYDPHALPVIQNINYRDMVAEN 389
RGGF++++YV ++ F+ T Y G DN + + +I +D+ +
Sbjct: 340 NPDRGGFIRNIYVNNCRFGEVEDLFYATSMYAGEGMDNTH----FTEVHDIYVKDVTCQK 395
Query: 390 VTMAAR-LEGIAGDPFTGICISNVTIE 415
+ AA L+G P + NV ++
Sbjct: 396 ASAAALVLQGTTVKPIYNVRFENVNVD 422
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 196/437 (44%), Gaps = 56/437 (12%)
Query: 17 LLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGD--GTTSNTKAFKA 74
L + ++ S T G+++ A+ + ++ +C + ++G G NT+AF+
Sbjct: 5 LALSLMASCITLGIQAGTAQAASSVKFPDKTC-----DVTQYGAEGHRLQIALNTEAFQK 59
Query: 75 AIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLP 134
AID + + GG + VP G +L L S+ L L KDA ++AS + + E
Sbjct: 60 AIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTEVAAYRATEKT- 115
Query: 135 SYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT------- 187
+ + E G + I + +V ITG GTIDGQG +WW ++R ++ T
Sbjct: 116 ---KYAEAENG-WLPFISIADAQNVAITG-QGTIDGQGAVWWERWRE-NIRATGKKGGTD 169
Query: 188 RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC 247
RP LI I S N+ + +TL +SPS++V YS V V G IL+P +PNTD I+P
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 248 TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307
N RI + YI DD +A+K+ G+ I I I++GSE SG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---ILKQGRGISIGSETSG 286
Query: 308 GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY------ 361
G+ +V E+ S G+RIKT G+GG VK++ R M ++ Y
Sbjct: 287 GVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIV 346
Query: 362 ----------------------GSHPDNNYDPHALPVIQNINYRDMVAENVTMAAR-LEG 398
+ P+ +D + P N+ ++ + T AA + G
Sbjct: 347 QAEVDKMLAEGGFTMGEQIYPPDTDPEQPFDQYKTPHFSNVTIENLESTGKTKAAAYIIG 406
Query: 399 IAGDPFTGICISNVTIE 415
+ P +G NV I+
Sbjct: 407 VPEAPLSGFHFDNVRID 423
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 199/450 (44%), Gaps = 47/450 (10%)
Query: 9 RTQVICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSN 68
R V C++ ++ ++ N + + DW I + ++ V D + ++
Sbjct: 22 RLIVNCMVCIIPLLSCANASA-----STGEDWKIAEQIVNQIQLPNIPNEKFVVDVSDTS 76
Query: 69 TKAFKAAIDHL-SRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
A +A I L + GG + VP G W + G L S L L + A LL S D
Sbjct: 77 LSAARAPIQRLIDEASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSH 136
Query: 127 W-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL----WWRK--- 178
+ PV++ R TE YS LI+ N+ DV ITG GTIDG + W+ K
Sbjct: 137 YLPVVKT-----RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNT 190
Query: 179 -----------------FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
+ GE Y RP LI+ +++ + + + T +NSP W H VY+S
Sbjct: 191 DMHALRKMGFDGVPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTS 250
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V+ + + + + N DG++ +S ED + +GDD + +KSG D G G+P+
Sbjct: 251 HATVRRVKVESHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPS 308
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
++ R I LGSEMSGGI+ V E+ + +S R K+ + RGG V+ +
Sbjct: 309 TDIVARNNDLGGEDG--IGLGSEMSGGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMI 366
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG 401
+R + + K FW +Y S+ N+ +I D+ ENV +
Sbjct: 367 RIRGSKVASFKHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDA 422
Query: 402 DPFTGICISNVTIELTNKPKKLQWNCTDIT 431
P + ++TI+ + L+ N DI+
Sbjct: 423 APVHNVKFKDITIKKAEEILILE-NAKDIS 451
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 54/376 (14%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY-S 148
+ +P G++LTG+ L S +L L A L+ SQD ++P+I + G D R+ +
Sbjct: 36 IVIPQGRFLTGALFLKSGVSLRLDAGAQLVGSQDLADYPLINTRVA---GIDM---RWPA 89
Query: 149 SLIFGTNLTDVVITGDNGTIDGQGELWWRKF-----RAG--------------ELKYTRP 189
+I + +V ITG GTIDGQG +WW++F R+G + RP
Sbjct: 90 GIINIIDCENVSITG-TGTIDGQGVIWWQRFWGDDERSGMVGDYSARGLRWVVDYDCQRP 148
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
I + SQ+I + + T S WN+H YS + V+G+ I + P+TDGI+ DSC
Sbjct: 149 RNILVFESQSILLRDFTSRESGFWNMHLCYSRRITVEGVQI-SNSAGPSTDGIDIDSCEQ 207
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
R+E C + DD + +KSG + + ++IR C + I LGSE SGGI
Sbjct: 208 VRVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIR--GCTLNKGSGITLGSETSGGI 265
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI------TGSYGS 363
+ V ED + G RIK+A RGGF++D+ V+ + + +++ I SYG
Sbjct: 266 ERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLIQLNWFPQYSYGD 325
Query: 364 HPDNNYDPH-------------ALPVIQNINYRDMVAEN-----VTMAARLEGIAGDPFT 405
+ + P L + + ++M A + A +EG P T
Sbjct: 326 RGNLSDKPEHWRKLAEGVEGEAGLTAVSGLTIKNMSAHRSDNKYFSRAFFIEGYPERPVT 385
Query: 406 GICISNVTIELTNKPK 421
G+ + + I+ + K
Sbjct: 386 GLTLDGILIDASEFGK 401
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 195/401 (48%), Gaps = 50/401 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G GDG T NT + AID ++ +GG + PG++LTGS + L +
Sbjct: 48 NVAKYGAKGDGKTLNTNTIQKAIDDCAK---KGGGIVVFNPGEYLTGSVFVKKGVNLRID 104
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K +L SQD K++ VI+ R E ++LI + D +I+G G I+ QG+
Sbjct: 105 KGVTILGSQDIKDYKVIDT-----RVAGIEMEWPAALINVLDQEDAMISG-KGLINAQGK 158
Query: 174 LWW-------RKFRAGELKYT------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W +++ L++ RP I + S+N+ I +L + + W V VYS
Sbjct: 159 VFWDYYWNLRKEYEPKGLRWIIDYDARRPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYS 218
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
S V V G+TI V P+TDG++ DS + +++ I DD +K+G D G+
Sbjct: 219 SYVTVDGLTINNNVGGHGPSTDGVDIDSSSWILVQNTDIDCNDDNFCIKAGRDADGLRVN 278
Query: 279 MPTKQLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
P + ++IR C++ ++ LGSE SGGI+++ A +I + + + + IK+AV RGGF
Sbjct: 279 RPCEYVVIR--DCVARKGGGLLTLGSETSGGIRNIYASNIKGMATSNCLNIKSAVTRGGF 336
Query: 338 VKDVYVRRMTMKTMKWAFWITG------SYGSHP---DNNYDP--------------HAL 374
V++V + +TM ++ + SY P D N P +
Sbjct: 337 VENVLLENVTMDSVGTVLQVNMNWNPAYSYSELPKGYDYNSIPKHWKALLQKVEPKEKGI 396
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P+ +NI ++ + A + G+ + + NV+IE
Sbjct: 397 PIFKNIYMNNIHIKGAKRAINVVGLPQSKVENVNLKNVSIE 437
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 182/390 (46%), Gaps = 52/390 (13%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T A AI+ S S+GG + VP G++LT L S+ L L +L + D +
Sbjct: 32 TDAINRAIEACS---SQGGGTVLVPDGEFLTAPIRLKSNVNLHLSDSTILKFTTD---YN 85
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY 186
+ E + + G D S LI+ ++ ITG G +DGQ + W+ + R +K
Sbjct: 86 LFETVLTRIEGIDCHN--ISPLIYAYGENNIAITG-KGKLDGQASTDNWFAEQRIRGIKA 142
Query: 187 T--------------------------------RPYLIEIMYSQNIQISNLTLINSPSWN 214
RP I + +NI + T+ SP W
Sbjct: 143 ENGETVNEKTLLYQMKADSIPVKERVFEKANGIRPQFINLYKCKNILLEGFTINRSPFWL 202
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HP+ S +V ++G+ + + PN DG +P+SC N IEDC +GDDC+A+KSG D+ G
Sbjct: 203 IHPLLSENVTIKGVKMQS--HGPNNDGCDPESCENVLIEDCDFDTGDDCIAIKSGRDEDG 260
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAV 332
+ +P K +I+R + A +A+GSE++GG +V E+ + + + + +RIK+
Sbjct: 261 RYWNIPCKNIIVRECR-MKDGHAGVAIGSEITGGCHNVWVENCRMDSPELDRIIRIKSNP 319
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM 392
RGG V +V+VR +T+ K + H D P+ LP+ +NI+ ++ ++
Sbjct: 320 MRGGNVANVFVRNITVGECKQSILGIEQKYWHVDEG--PY-LPLFENIHLENITSKKSQY 376
Query: 393 AARLEGIAGDP-FTGICISNVTIELTNKPK 421
L+G I + + + E KP+
Sbjct: 377 VLHLDGFDDKSQIRNIYLKDCSFEGVEKPE 406
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 176/384 (45%), Gaps = 49/384 (12%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT+A + AID + + GG + VP G +LT L S+ L L KDA L+AS + +
Sbjct: 53 NTEAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKSNIQLKLEKDATLVASTEVAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYT 187
+ + + E G + I + +V I G+ GTIDGQG +WW ++R ++ T
Sbjct: 110 RADDK----SKYAEAENG-WLPFISIADAQNVAIVGE-GTIDGQGAVWWERWRE-NIRAT 162
Query: 188 -------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTD 240
RP LI I S N+ I +TL +SPS++V Y+ V + G IL+P +PNTD
Sbjct: 163 GKKGGTDRPRLIYITRSHNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTD 222
Query: 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300
I+P N RI + YI DD +A+K+ G+ + I T I+
Sbjct: 223 AIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTLKQGRG--IS 279
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
+GSE +GG+ +V E+ T S G+RIK+ G+GG VK++ R M ++ +
Sbjct: 280 IGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTKMHNVEVPLVFSAY 339
Query: 361 Y----------------------------GSHPDNNYDPHALPVIQNINYRDMVAE-NVT 391
Y S P +D + P NI ++ + +
Sbjct: 340 YKAAPIVEAEVEKLLKEGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENLTSTGDSK 399
Query: 392 MAARLEGIAGDPFTGICISNVTIE 415
AA + G P +G +NV IE
Sbjct: 400 AAAYIIGTPEAPLSGFHFTNVNIE 423
>gi|340347489|ref|ZP_08670597.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433653517|ref|YP_007297371.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339609185|gb|EGQ14060.1| exo-poly-alpha-D-galacturonosidase [Prevotella dentalis DSM 3688]
gi|433304050|gb|AGB29865.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 472
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 190/421 (45%), Gaps = 61/421 (14%)
Query: 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLF 111
S SL+++G VGDG T NT+AF A+ L++ GG L VP G WLTG L + L
Sbjct: 50 SVSLKDYGAVGDGLTMNTRAFAKAMADLAK---RGGGHLNVPAGIWLTGPIVLKDNIDLH 106
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L ++A++L S D++++ D + + + + +++ +TG+ G IDG
Sbjct: 107 LDRNALILFSPDKRDFLT---------ATDGKAAKVVPCLSASKRSNIAVTGE-GIIDGN 156
Query: 172 GELW------------WRKFRA--------GELKY-------------------TRPYLI 192
GE W W ++RA G+L Y R +L+
Sbjct: 157 GEYWRPVKRSKVSDTEWNQYRAMGGTVTAKGDLWYPFGLKHEPDVAEDHEAQERMRQHLV 216
Query: 193 EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252
+ + + +TL N+P +++ P + VIV GIT+ P + N D I+ +C N I
Sbjct: 217 RFTDCRRVLVQGVTLRNAPRFHLVPQRCTDVIVDGITVACPWNAQNGDAIDIGNCRNVLI 276
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
+ I +GDD + +K G G A G P + + I+ + +GSE SGG+ ++
Sbjct: 277 VNNTINAGDDGICMKGGAGAKGAADG-PCENINIQDNRVYHAHGGFV-IGSEFSGGMNNI 334
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK------WAFWITGSYGSHPD 366
T +++G+R K+A GRGG +D+++ ++ M +K + G+
Sbjct: 335 YVHRNTFAGTDTGLRFKSATGRGGTTRDIHISQIYMTDIKDEAIVFECDYTDNHVGAGAQ 394
Query: 367 NNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWN 426
N + LP +I+ D+V A + G G GI IS T+ T +
Sbjct: 395 KNAETDFLPEFTDIHISDVVCHGARTAIKARGRQG-MIHGIGISRSTLLYTQTAADIGPE 453
Query: 427 C 427
C
Sbjct: 454 C 454
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 24/338 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ +FG G+G +T +AAI ++ +PPGK+ S L S+ L L
Sbjct: 84 NVRDFGASGEGERDDTVFIQAAI-----MACPPEGRVVIPPGKYRVTSLFLKSNSNLELE 138
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT------EG---GRYSSLIFGTNLTDVVITGD 164
+ AVL+ P++ L S G+G ++ EG Y++L G +V + G
Sbjct: 139 EGAVLIYDGRPGRLPILPGLLS-GKGENSLALGSWEGEAADMYAALFTGCGAENVNLYGK 197
Query: 165 NGTIDGQG-ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+ G E WW + + RP ++ + + ++I++ L PSW +HP + S +
Sbjct: 198 GEILGGASMEDWWSEENRQSSPH-RPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCSDL 256
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
+ + I+ P SPNTDGINP+SC + I C+ GDDC+A+KSG + +P
Sbjct: 257 GIYDVEIINPEDSPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGSH 316
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG--FVKDV 341
+ IR+ + V +GSE+S G+ V D +++ G+RIKT GRG V V
Sbjct: 317 IQIRQCFMENGHGGV-TIGSEISSGVHHVTVRDCCFRNTDRGLRIKTRRGRGKSCVVDAV 375
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALP 375
+ M+ + F + Y PD D ALP
Sbjct: 376 LFENIHMEQVDTPFVLNCFYFCEPDGRSDYVQTKEALP 413
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 176/398 (44%), Gaps = 56/398 (14%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG + NT+A AAID G + +P G+WLTG + S+ L L +
Sbjct: 52 ITDFGADPNNKKKNTEAIAAAIDSAHAI---AGGTVVIPKGEWLTGKIHFKSNVNLHLEE 108
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A LL S+D +++ LP+ E YS LI+ ++ ITG G + + +
Sbjct: 109 GATLLFSEDPQDY-----LPAVLSTWEGMECYNYSPLIYAYECENIAITG-KGKLKAKMD 162
Query: 174 LW--WRKFRAGELKYT-------------------------RPYLIEIMYSQNIQISNLT 206
W W +G ++ RP I+ S++I + +
Sbjct: 163 TWEVWFARPSGHMQNLKRLYEMASKDIPVEERQMVNDSANFRPQFIQFNRSKHILLEGIA 222
Query: 207 LINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266
+ NSP W +HP SS VI++ + + A N DG++P+ N IE+C GDD +AV
Sbjct: 223 IENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIENCVFDQGDDAIAV 280
Query: 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV---RAEDITAIDSE 323
K+G +Q P K ++IR + + ++A+GSE+SGG+++V E
Sbjct: 281 KAGRNQDAWRLNTPVKNIVIRDCS-VKNGHQLLAIGSELSGGVENVYMGNCEVAPNAKLN 339
Query: 324 SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHALP 375
+ IKT RGG+VK++Y M+ +K G G D Y L
Sbjct: 340 HLLFIKTNERRGGYVKNIY-----MEDIKAGRIDKGILGIETDVLYQWRDLVPTYERRLT 394
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVT 413
I+ +N ++ A NV +R+ G P I + VT
Sbjct: 395 QIEQVNMTNIKAANVDFVSRILGEEEAPVQNISLRKVT 432
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 157/333 (47%), Gaps = 35/333 (10%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG G T A + AID + G + VPPG++LTG+ L +H L AV
Sbjct: 21 FGADASGQQLATAAIQHAID-----IAAPGDTVVVPPGRYLTGALFLKNHLIFELQTGAV 75
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
LL S++ +++P+ + R + + +I DV + G +GTIDGQG +WW
Sbjct: 76 LLGSRELEDYPLRQT-----RVAGIDMVWPTGIINILQCHDVCVCG-SGTIDGQGAVWWH 129
Query: 178 KFRAGE-------------LKYT------RPYLIEIMYSQNIQISNLTLINSPSWNVHPV 218
KF + L++ RP + + S+ +++S T S WN+H
Sbjct: 130 KFWGTDENGGMLADYSQRGLRWVVDYDCQRPRNLVVYRSEQVEMSGFTSRESGFWNIHLC 189
Query: 219 YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
YS + + + + P+TDGI+ DS R+E C + DD + VK+G G
Sbjct: 190 YSQHLYLHHLQV-ENSGGPSTDGIDIDSSQQVRVEHCRVSCNDDNICVKAGRGAEAERIG 248
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
+ ++IR C + I LGSE SGGI+ V E+IT + G RIK+A RGGF+
Sbjct: 249 ATARDIVIRE--CELLHGSGITLGSETSGGIEQVLIENITFSGTGVGFRIKSARNRGGFI 306
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP 371
+ V V + M + + F ++ P +Y P
Sbjct: 307 RHVRVSGLQMTDVHYPFMFQLNW--FPAYSYSP 337
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 52/400 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLH 113
+ ++G D T + A AI H + + GG + +P G + + G+ L S+ L +
Sbjct: 53 VTDYGAKSDTTFDSCPAILQAISHCN---TNGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A L S + ++ P++ + TE YS I+ T+V +TG GTIDG G
Sbjct: 110 EGARLEFSTEAADYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVAVTG-KGTIDGNG 163
Query: 173 ELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLI 208
+ + + A GE Y RP +I+ +N+ + +L +
Sbjct: 164 SVTFNGWHAIQGPAVDRLRQMGIDSVPVYQRVFGEGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP W +HPV+ +V V+ + I + + N DG +P+SCTN IE GDD +A+KS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESCTNVLIEGMDFNVGDDGIAIKS 281
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVR 327
G DQ G G T+ +IIR F+ I +GSEMSGG++++ ED +G+
Sbjct: 282 GRDQDGWRIGQATENVIIRN----CHFARWAITVGSEMSGGVRNIYIEDCKIDSCRNGIY 337
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAF--WITGSYGSHPDNNYDPHALPVIQNINYRDM 385
K+ RGG+ +++ +RR+ W + T +G N+ + +NI D+
Sbjct: 338 FKSNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH-----PTLFRNICIEDV 392
Query: 386 VAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
V ++A G+ I + N+ ++ PK +Q
Sbjct: 393 TCNRVDSVALMANGLPEAKLHNITLRNINVK--KAPKAIQ 430
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 187/417 (44%), Gaps = 51/417 (12%)
Query: 31 ESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQL 90
E+ R+++W A + E+FGG DG T NT A + AID S+ GG +
Sbjct: 356 EAPAGRDANWV---TTVTYAEHCTPEDFGGKADGKTLNTTAIQQAIDQCSQ---RGGGTV 409
Query: 91 FVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150
+ PG+WL+G L S+ TL + + A L AS E ++ + + R E +
Sbjct: 410 QLSPGRWLSGPLQLQSNITLQIDQGATLQASNQEGKF--VNAFIGH-PARVNE-----AF 461
Query: 151 IFGTNLTDVVITGDNGTIDGQGELWW-------RKFRAGELKY--------------TRP 189
I+ +N+ +V ITG + WW + R G K RP
Sbjct: 462 IYASNVNNVAITGGGTLDGDGEKSWWPQALKIRAEVRGGNPKAFTDRFPGIPLANGAPRP 521
Query: 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249
+ IE + +I L L NSP WN+ S+ + VQ + I PV+SPNTDG++ S N
Sbjct: 522 WFIEFNNVSHSKIEQLHLTNSPMWNIVIRNSADITVQNVRITNPVSSPNTDGMDIVSSRN 581
Query: 250 TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGI 309
+ + I +GDD +A+KS G+ G I + I++GSE + GI
Sbjct: 582 ITVSNMDIHTGDDNIAIKS-----GLVNGTAAASKDITIEDSVMRDGHGISVGSETANGI 636
Query: 310 QDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY----GSHP 365
V +T +++E+GVRIK+A RG + + +TM + +T SY G+
Sbjct: 637 GKVTINHVTFLNTENGVRIKSARDRGENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQG 696
Query: 366 DNNYDP-------HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
P + P ++ I+ D++A + A G+ P + ++N+ I+
Sbjct: 697 HTLTQPIETAAVTASTPKMKGIHISDLMATKASYAMIFSGLPESPVEDVTLNNIRID 753
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 34/312 (10%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT +F+ AID + + GG + VP G +L L S+ L L K A L+AS E +
Sbjct: 60 NTSSFQKAIDECA---AAGGGTVLVPAGNYLVEPLFLKSNVRLHLEKHATLVASTGESAY 116
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
R T+ RY+ I + +V ITG+ GTIDGQG +WW ++R
Sbjct: 117 ------------RATDSTRYAQAENGWLPFISIADAQNVAITGE-GTIDGQGAVWWERWR 163
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I S + + +TL NSPS++V Y+ V V G +I+AP
Sbjct: 164 EA-IRATGKKGGTDRPRLIYITRSSQVLVDGVTLTNSPSFHVVMRYARDVTVNGTSIIAP 222
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + I DD +A+K+ G+ I +
Sbjct: 223 WHAPNTDAIDPIDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIANN---VL 279
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE SGG+ +V E+ S G+RIK+ G+GG VK+V R M ++
Sbjct: 280 KQGRGISIGSETSGGVNNVLVENNRFEGSMYGIRIKSLRGKGGEVKNVTYRHTRMVNVEV 339
Query: 354 AFWITGSYGSHP 365
+G Y + P
Sbjct: 340 PLVFSGYYQAAP 351
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 167/372 (44%), Gaps = 36/372 (9%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
N A +AAI L G L + PG+W L S TL L + A L + W
Sbjct: 108 NADALQAAIADLPV-----GGTLRIGPGRWTALPVTLRSDMTLHLAEGAELCSPSSRDSW 162
Query: 128 PVIEPLPSYGRGRDTEGGR----YSSLIFGTNLTDVVITGDNGTIDGQGEL--WW---RK 178
V + G + G +++ + +V+ G G +DG G WW ++
Sbjct: 163 SVFPARDNAGHLLGSWEGEPAACFAAPLHAIGARRLVLEG-KGILDGAGNAGDWWGWAKE 221
Query: 179 FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
R G + +LI+ ++ + T+ N+PSW +HP ++ ++I AP SPN
Sbjct: 222 TRDGARRARGLHLIDC---SDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPN 278
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG----IAYGMPTKQLIIRRLTCISP 294
TDG NP+ + R+E GDDC+A+K+G + G A+ T+ + IR
Sbjct: 279 TDGFNPEGSSEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERG 336
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
V+ +GSEMSGG+ DV ED I ++ G+R+KT GRGG V + +RR+ M+ + A
Sbjct: 337 HGGVV-IGSEMSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTA 395
Query: 355 FWITGSYGSHPDNNYD------PHAL----PVIQNINYRDMVAENVTMA-ARLEGIAGDP 403
F Y PD + + P AL P I I D+ V A G+ P
Sbjct: 396 FSANAHYHCDPDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAP 455
Query: 404 FTGICISNVTIE 415
+ I N+ +
Sbjct: 456 IRNVSIRNLRVH 467
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 181/393 (46%), Gaps = 54/393 (13%)
Query: 61 VGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLA 120
+ G + T + AID S S GG + +P G W++G L SH TL L + L +
Sbjct: 38 IKSGDVTVTSVVQKAIDQCS---SNGGGIVTLPAGTWVSGPLTLKSHVTLHLAAGSTLKS 94
Query: 121 SQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL-WWRK 178
+ + ++ P P++ R +LI +++ D+ ITG GTIDGQG+ WW K
Sbjct: 95 TGNPDDFVPAFISQPTHPR---------EALIIASHVQDIAITGP-GTIDGQGQKSWWSK 144
Query: 179 -------FRAGELKY--------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
+ G++ + RP+LIE + Q IS L +INSP WN+
Sbjct: 145 ASDAREHLKHGDVSWFEKNWKGIPPANGMPRPWLIEFDHVQGGNISQLHIINSPMWNLVL 204
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S ++ V +I P SPNTDGI+ S N + + +GDD +A+KSG G A
Sbjct: 205 RNSENIDVSRSSIFNPPDSPNTDGIDVVSSKNISLRHLKLSTGDDDIAIKSGLASTGKAP 264
Query: 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
P+ + I + +++GSE + GI V +++ +++G+RIK+ RG
Sbjct: 265 --PSSNINIDDIDIYRGHG--LSVGSETANGIGRVTMQNVRFNGTDNGLRIKSGRDRGNQ 320
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL------------PVIQNINYRDM 385
+ + +TM + IT SYG + Y +L P I ++ + +
Sbjct: 321 IGPISADNITMNHVNVPLVITDSYGG--NGGYSSKSLTSIPTSAISSLTPFIHDVTIQHL 378
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTN 418
A N MA + G+ P I + ++ I+ T+
Sbjct: 379 TATNSGMAGIISGLPEAPLQNITLKDIHIDATH 411
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 196/440 (44%), Gaps = 43/440 (9%)
Query: 19 VGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDH 78
V I++L T S + + DW I + ++ V D + ++ A +A I
Sbjct: 28 VAFIVTLLTCSYAS-ASTDEDWEIAEQIVNQIQLPTIPNEKFVVDVSDTSLSAARAPIQR 86
Query: 79 -LSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPS 135
+ + + GG + VP G W + G L S L L + A LL S D + PV++
Sbjct: 87 VIDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT--- 143
Query: 136 YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL----WWRK------------- 178
R TE YS LI+ N+ DV ITG GTIDG + W+ K
Sbjct: 144 --RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGF 200
Query: 179 -------FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
+ GE Y RP LI+ +++ + + + T +NSP W H VY+S V+ + +
Sbjct: 201 DGVPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVE 260
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
+ + N DG++ +S ED + +GDD + +KSG D G G+P+ ++ R
Sbjct: 261 SHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDL 318
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
I LGSEMSGGI+ V E+ + +S R K+ + RGG V+ V +R + +
Sbjct: 319 GGEDG--IGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASF 376
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
K FW +Y S+ N+ +I D+ ENV + P + +
Sbjct: 377 KHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDAAPVHNVKFKD 432
Query: 412 VTIELTNKPKKLQWNCTDIT 431
+ I+ + L+ N DI+
Sbjct: 433 IKIKEAEEILILE-NADDIS 451
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 196/440 (44%), Gaps = 43/440 (9%)
Query: 19 VGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDH 78
V I++L T S + + DW I + ++ V D + ++ A +A I
Sbjct: 28 VAFIVTLLTCSYAS-ASTDEDWKIAEQIVNQIQLPNIPNEKFVVDVSDTSLSAARAPIQR 86
Query: 79 -LSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPS 135
+ + + GG + VP G W + G L S L L + A LL S D + PV++
Sbjct: 87 VIDKASASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATLLFSGDPSHYLPVVKT--- 143
Query: 136 YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL----WWRK------------- 178
R TE YS LI+ N+ DV ITG GTIDG + W+ K
Sbjct: 144 --RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFIGWYEKQNTDMHALRKMGF 200
Query: 179 -------FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
+ GE Y RP LI+ +++ + + + T +NSP W H VY+S V+ + +
Sbjct: 201 DGVPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKVE 260
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
+ + N DG++ +S ED + +GDD + +KSG D G G+P+ ++ R
Sbjct: 261 SHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDL 318
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
I LGSEMSGGI+ V E+ + +S R K+ + RGG V+ V +R + +
Sbjct: 319 GGEDG--IGLGSEMSGGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRIRGSKVASF 376
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
K FW +Y S+ N+ +I D+ ENV + P + +
Sbjct: 377 KHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTVLEIHAPDAAPVNNVKFKD 432
Query: 412 VTIELTNKPKKLQWNCTDIT 431
+ I+ + L+ N DI+
Sbjct: 433 IKIKEAEEILILE-NTDDIS 451
>gi|397656221|ref|YP_006496923.1| Polygalacturonase [Klebsiella oxytoca E718]
gi|394344836|gb|AFN30957.1| Polygalacturonase [Klebsiella oxytoca E718]
Length = 460
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 175/391 (44%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT A + AID + + GG + VP G +LT L ++ L L KDA L+AS + +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
RG D RY+ I + +V I G+ GTIDGQG +WW ++R
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I + N+ I +TL +SPS++V Y+ V + G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ + I T
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV-VDNIYIANNTLKQ 274
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE +GG+ +V E+ T S G+RIK+ G+GG VK++ R M ++
Sbjct: 275 --GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 354 AFWITGSY----------------------------GSHPDNNYDPHALPVIQNINYRDM 385
+ Y S P +D + P NI ++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 386 VAE-NVTMAARLEGIAGDPFTGICISNVTIE 415
+ + AA + G P +G SNV IE
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIE 423
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 157/324 (48%), Gaps = 33/324 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+L +F GDG +TK + A++ ++ Q+ L + PG +LTG+ + S+ L
Sbjct: 10 TLSQFTPHGDGKNLDTKIIQQALNEANKQQT----GLTIGPGDYLTGALFVPSNSHLQFE 65
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
A L+ S D ++P I+ R E ++++ + DVVI G G IDG G
Sbjct: 66 AGARLIGSTDLADYPEIDT-----RVAGVEMRWPAAILNVIDGEDVVIEGP-GVIDGNGP 119
Query: 174 LWWRKF-----RAGELK--------------YTRPYLIEIMYSQNIQISNLTLINSPSWN 214
+WW ++ + G+ K RP + +N IS+LTL+ S WN
Sbjct: 120 VWWERYWGTDQKGGQRKIYDAKNLRWIVDYEVKRPREVLFYRCKNCAISDLTLMRSGFWN 179
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
Y + V +T+ P+TDGI+ DS + R+ +C + GDDC+ VKSG D G
Sbjct: 180 CQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSSSYVRVHNCELSCGDDCIVVKSGRDGDG 238
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334
+ P + I CI + LGSE+S GI DV D+ +++ G R+K++ R
Sbjct: 239 LRVNQPAAHIEIDH--CIIHSGYGVTLGSEVSAGISDVHIHDMIFENTDCGFRMKSSADR 296
Query: 335 GGFVKDVYVRRMTMKTMKWAF-WI 357
GG +K+V + M +++ F W+
Sbjct: 297 GGVIKNVVAEHLEMHNVQFPFSWL 320
>gi|413925949|gb|AFW65881.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 213
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 81/116 (69%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R S+ +FGGVGDG T NT AF+ A+ + + GG+ L VP G WL GSFNLTSH
Sbjct: 46 RPEVISIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHM 105
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
TLFL + AVL A+QD + WP++EPLPSYGRGR+ G RY+S I G L DVVITG+
Sbjct: 106 TLFLARGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVITGE 161
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 86/131 (65%)
Query: 349 KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408
+ MKWAF +TGSYGSHPDN Y+P ALPV++ I+Y ++VA NV++A +LEGIA PF IC
Sbjct: 1 ENMKWAFTMTGSYGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDIC 60
Query: 409 ISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENM 468
+SNVTI + K KK WNCT I G+S+ V P+PC LL + C P E
Sbjct: 61 LSNVTITMAAKAKKYPWNCTYIHGLSNTVYPQPCSLLEEKPAEGDAFCPGPHELHTREEN 120
Query: 469 GVQMCSYKANY 479
+Q CSY +N+
Sbjct: 121 SLQHCSYSSNH 131
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 175/391 (44%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT A + AID + + GG + VP G +LT L ++ L L KDA L+AS + +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
RG D RY+ I + +V I G+ GTIDGQG +WW ++R
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I + N+ I +TL +SPS++V Y+ V + G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ + I T
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTLKQ 274
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE +GG+ +V E+ T S G+RIK+ G+GG VK++ R M ++
Sbjct: 275 --GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 354 AFWITGSY----------------------------GSHPDNNYDPHALPVIQNINYRDM 385
+ Y S P +D + P NI ++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 386 VAE-NVTMAARLEGIAGDPFTGICISNVTIE 415
+ + AA + G P +G SNV IE
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIE 423
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 25/314 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID S + GG + + PG +L G+ + S L L
Sbjct: 58 SANSFGAVADSTRLSTEAIQKAIDECS---AAGGGTVILAPGYYLVGALFIKSGVNLQLD 114
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K LLAS D +P R E S+++ +V I+G+ G ID +G+
Sbjct: 115 KGVTLLASTDINNYPEFRS-----RIAGIEMIWPSAVLNVIKQKNVAISGE-GMIDCRGK 168
Query: 174 LWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYS 220
+W ++ + +Y + L I + S ++ + + TL+ + W +YS
Sbjct: 169 KFWDQYWSMRREYEKKGLRWAVDYDCKRVRGILVERSTDVTLKDFTLMRTGFWACQILYS 228
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ G+TI + P+TDG++ DS TN IE+C I DD + +KSG D G+
Sbjct: 229 DYCSINGLTINNNIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTDGLRVN 288
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
PT+ ++IR T + +I GSE SGGI+++ D+TA + S +R+K+A+ RGG +
Sbjct: 289 RPTENVVIRNCT-TRKGAGLITCGSETSGGIRNILGHDLTAQGTWSVLRLKSAMNRGGII 347
Query: 339 KDVYVRRMTMKTMK 352
+++Y+ R+ +++
Sbjct: 348 ENIYITRVKADSVR 361
>gi|375259243|ref|YP_005018413.1| glycoside hydrolase [Klebsiella oxytoca KCTC 1686]
gi|365908721|gb|AEX04174.1| glycoside hydrolase family protein [Klebsiella oxytoca KCTC 1686]
Length = 460
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 175/391 (44%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT A + AID + + GG + VP G +LT L ++ L L KDA L+AS + +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
RG D RY+ I + +V I G+ GTIDGQG +WW ++R
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I + N+ I +TL +SPS++V Y+ V + G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYITRASNVLIYGVTLTHSPSFHVVTRYAHDVDINGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ + I T
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPEGV-VDNIYIANNTLKQ 274
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE +GG+ +V E+ T S G+RIK+ G+GG VK++ R M ++
Sbjct: 275 --GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYRNTRMHNVEV 332
Query: 354 AFWITGSY----------------------------GSHPDNNYDPHALPVIQNINYRDM 385
+ Y S P +D + P NI ++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 386 VAE-NVTMAARLEGIAGDPFTGICISNVTIE 415
+ + AA + G P +G SNV IE
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIE 423
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 62/414 (14%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + ++A AI S GG ++ +P G+W TG +L S+ + L + A
Sbjct: 56 DFGAEEDDQQATSQAIVTAI---SAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEEGA 112
Query: 117 VLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
LL S+D K++ LP+ E YS LI+ + ++ ITG G + + W
Sbjct: 113 TLLFSEDPKDY-----LPAVKTTWEGMECFNYSPLIYAFDCENIAITG-KGELKAKMNTW 166
Query: 176 WRKF-----------RAGELKYT----------------RPYLIEIMYSQNIQISNLTLI 208
F R L T RP I+ + + + + +
Sbjct: 167 KVWFSRPKAHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVKIT 226
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP W +HP S V+++ + + A N DG++P+ N IE+C GDD +AVKS
Sbjct: 227 NSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIENCIFDQGDDAIAVKS 284
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR- 327
G +Q MPTK ++IR + + ++A+GSE+SGG+++V E+ + + G +
Sbjct: 285 GRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAIGSELSGGVENVYMEN---CEVQEGAKL 340
Query: 328 -----IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--------PHAL 374
+KT RGG+V++V+ MK ++ G G D Y L
Sbjct: 341 NHLLYVKTNERRGGYVRNVH-----MKNIQCGKIDKGVLGIETDVLYQWRDLVPTYERRL 395
Query: 375 PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCT 428
I+NI ++ A +V +R++ P + + N+ +E K + N
Sbjct: 396 TPIENIYMENVRAADVAFVSRIKADPESPVEVVQLKNIQVESIRDQKVINENVN 449
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 75/396 (18%)
Query: 73 KAAIDHLSRFQSEGGSQLFVP------PGKWLTGSFNLTSHFTLFLHKDAVL--LASQDE 124
+ AID ++ GG ++ +P P + +GS L S+ L++ ++A++ L ++
Sbjct: 91 QKAIDDANK---NGGGKVIIPGGTKEEPKIYYSGSITLKSNVELYIEENAIIKFLRNKSN 147
Query: 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-QGELWW------- 176
+ +P++ Y R E +S I+ ++ I+G G +DG E W
Sbjct: 148 RFYPLV-----YTRWEGVEMMNFSPFIYSYEAENISISG-KGVLDGCADEFNWMPWKFGY 201
Query: 177 -----------RKFRAG--------------ELKYTRPYLIEIMYSQNIQISNLTLINSP 211
R F G E+ RP I+ S+NI I ++T++NSP
Sbjct: 202 FNEEDQQIQRERLFNLGQENADVRTRRIFNDEISTIRPPFIQPYKSKNILIKDITILNSP 261
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W V+PV ++ + IT+ + + N DG++P+SC + IEDC+ +GDDC+A+KSG +
Sbjct: 262 FWEVNPVLCENIKIDSITVDSHLY--NNDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRN 319
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG--VRIK 329
G G+P++ +IIR I +GSE+SGG+ D+ A D SE +R K
Sbjct: 320 NEGRNIGVPSQNIIIRN-NKFEDGHGGITIGSEISGGVNDIFAHDNYFDSSELDYPIRFK 378
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGSHPDNNYDPHALPVIQNINYR 383
T RGG ++++YV+ + K A F+ G+ G++ +P+++NI
Sbjct: 379 TNAERGGKLENIYVKNSVVNKSKIAVIHADFFYEEGTNGNY---------MPILRNITLS 429
Query: 384 DMV-----AENVTMAARLEGIAGDPFTGICISNVTI 414
++ + + A L+G P I I +V +
Sbjct: 430 NIKTVEGGSIDANNALFLKGFKDAPIENILIEDVYL 465
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 76/416 (18%)
Query: 71 AFKAAIDHLSRFQSEGGSQLFVP-------PGKWLTGSFNLTSHFTLFLHKDAVL--LAS 121
A + AID + ++ G ++ +P P + TG+ L S+ L + K+A+L + +
Sbjct: 90 AIQRAIDEAN--SNKDGGKVIIPGSENPEAPNVYYTGAITLKSNVILEIQKNAILRFVRN 147
Query: 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG-ELWWRKFR 180
+ + +P++ Y R E +S I+ ++ I G+ G +DG E W ++
Sbjct: 148 KTNEFYPLV-----YTRWEGVEMMNFSPFIYSYEAENIAIVGE-GVLDGNADEFNWMPWK 201
Query: 181 AGELKYT--------------------------------RPYLIEIMYSQNIQISNLTLI 208
G K RP I+ S+NI I ++ +I
Sbjct: 202 FGYFKEEDQQIQRERLFELGQKNADVRTERIFGDDVSTIRPPFIQPYKSKNILIKDVKII 261
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP W ++PV ++ V I + + N DG++P+SC + IE+CY ++GDDC+A+KS
Sbjct: 262 NSPFWEINPVLCENIKVDNIKVGTNLY--NNDGVDPESCKDMIIENCYFLTGDDCIAIKS 319
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGV 326
G + G G+PT+ +II R I +GSE+SGG+ D+ A D + + + +
Sbjct: 320 GRNNEGRNIGVPTENVII-RYNEFKDGHGGITIGSEISGGVNDIFAHDNYFDSKELDYPI 378
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGSHPDNNYDPHALPVIQNI 380
R KT RGG ++++YV+ T+ K A F+ G+ G H P+++NI
Sbjct: 379 RFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFYEEGTNGDHK---------PILRNI 429
Query: 381 NYRDM-VAENVTMAAR----LEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
++ E ++ A+ ++G P I I + + N LQ N +IT
Sbjct: 430 TLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAILNGVNGEAILQ-NVKNIT 484
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 191/441 (43%), Gaps = 84/441 (19%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
FG V D T+A + AID +SR EGG +L +P G TG+ L S L L
Sbjct: 29 FGVVPDSGAVQTQALQRAIDTISR---EGGGRLLLPGGTIRTGALELKSGVELHLQDRES 85
Query: 118 LLA---SQDEKEWPVI----EPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
+LA + E +PV+ E P Y +S LI+ + D+ +TG+ GT+DG
Sbjct: 86 VLAFVNEEPELHYPVVFSHWEATPCY---------NFSPLIYACDAHDIAVTGE-GTLDG 135
Query: 171 QGEL--WW-------------------------------------RKFRAGELKYTRPYL 191
+ WW R F G Y RP
Sbjct: 136 GADFGHWWNWHHQVEDAWSDDKPDLQLEDRKALRRMNVDGVPVEQRVFGPGH--YLRPNF 193
Query: 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251
I+ + + + TL NSP W ++PV S+ V G+T+ + N DG +P+SC
Sbjct: 194 IQTIRCSRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPESCNGVH 251
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311
I +C +GDDC+++KSG D+ G G+P + ++I + IALGSEMSGGI+
Sbjct: 252 IRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIEN-NEFADGHGGIALGSEMSGGIRR 310
Query: 312 VRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA------FWITGSYGS 363
V A + ++ + +R+KT RGG V+DV + M + A + G GS
Sbjct: 311 VLAVNNRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHVHGAAVHGTMLYEDGRNGS 370
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKP-KK 422
LP NI ++VA LE P TG+ + N+ I+ +P +
Sbjct: 371 D---------LPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARPMRS 421
Query: 423 LQWN--CTDITGISSGVTPKP 441
+ W D I+ P+P
Sbjct: 422 MNWKEPVVDDVVINGKSFPRP 442
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 175/391 (44%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT+AF+ AID + + GG + VP G +L L S+ L L KDA ++AS +
Sbjct: 53 NTEAFQKAIDDCA---AAGGGTVHVPRGNYLVDPLFLKSNIRLDLAKDATIVASTE---- 105
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
+ +Y R TE +Y+ I + +V ITG GTIDGQG +WW ++R
Sbjct: 106 -----IAAY---RATEKTKYAEAENGWLPFISIADAQNVAITG-QGTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I S N+ + +TL +SPS+++ YS V V G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYIKSSSNVLVDGVTLTHSPSFHIVMRYSHDVDVNGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ I I
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANN---IL 272
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE SGG+ +V E+ S G+RIKT G+GG VK++ R M ++
Sbjct: 273 KQGRGISIGSETSGGVNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEI 332
Query: 354 AFWITGSYGSHP------------------DNNYDPHALPVIQNINYRDMVAENVTM--- 392
Y + P + Y P P Y+ NVT+
Sbjct: 333 PLVFAAYYKAAPIVQAEVDKMLAEGGFTMGEQIYPPDTDPAQPFDQYKTPHFSNVTIENL 392
Query: 393 --------AARLEGIAGDPFTGICISNVTIE 415
AA + G+ P +G NV I+
Sbjct: 393 ESTGKTKAAAYIIGVPEAPLSGFHFDNVRID 423
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 190/397 (47%), Gaps = 50/397 (12%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG DG T +TKA + AID ++ +GG ++ PGK+LTGS + S L + +
Sbjct: 57 DFGAREDGKTISTKAIQQAIDACAK---KGGGKVQFRPGKYLTGSVFIKSGVFLHVDEGV 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LL SQ +++P I R E ++L+ I+G G I+GQG+ +W
Sbjct: 114 ELLGSQSLEDYPQINT-----RVAGIEMIWPAALVNINGQQKAGISG-KGIINGQGKPFW 167
Query: 177 RKFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
+ +Y RP + + S++I I ++TL + W VH +YSS V
Sbjct: 168 DAYWKLRSEYDKKGLRWIVDYDAQRPRTVIVDGSEDIIIRDVTLKQAGFWTVHLLYSSYV 227
Query: 224 IVQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V GI I + P+TDGI+ DS RI++ I DD +KSG D G+ PT
Sbjct: 228 TVDGIIIKNNINGIGPSTDGIDIDSSKWIRIQNADIDCNDDNFCIKSGRDWDGLRVNRPT 287
Query: 282 KQLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ ++I CIS +I GSE SGG++ + A ++ A ++ G+R+K+A RGG V+D
Sbjct: 288 EYVLI--TDCISRKGDGLITFGSETSGGMRHIIARNLKAHGTKVGIRLKSARNRGGVVED 345
Query: 341 VYVRRMTMKTMKWAFWITG------SYGSHP---DNNYDPH--------------ALPVI 377
+ + + M +++ AF +T SY P D N P +P
Sbjct: 346 ILLENIQMDSVRTAFEVTPNWNPSYSYSKLPAGYDINKVPEHWKKMVTPVEPASKGIPTF 405
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
QNI +++ + A ++G+ +P + NV I
Sbjct: 406 QNIQIKNVFVKFAQRAINVDGLQENPLQKFSLENVAI 442
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 47/328 (14%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+ +GDG T NT A + A+D + S +F P G +LTG+ N+ S+ ++L + A+
Sbjct: 103 YNALGDGKTLNTAALQKALD-----DCDENSIVFFPKGTYLTGALNVHSNSEIYLEEGAL 157
Query: 118 LLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLI--------FGTNLTDVVITGDNGTI 168
L ++D ++ LP + R E Y SL+ G N +V+I G+ G+I
Sbjct: 158 LQGTEDPADY-----LPKIHSRFEGYEMECYRSLLNLGELDHSSGFNCENVIIRGE-GSI 211
Query: 169 DGQGELWWRKFRAGELKYTRPY------------------------LIEIMYSQNIQISN 204
G G + E + R Y LI + QNI I
Sbjct: 212 MGGGAALAKSIARIEGERLRDYIASLGDKIKEYEKPETIASRFRGRLINMSNCQNIWIHG 271
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
LTL +PSWN+H +YS ++ T+ + N DG +PDS TN+ + C + DD V
Sbjct: 272 LTLGFAPSWNIHFIYSDQIVTDHCTLKSEGVW-NGDGWDPDSSTNSTLYACDFYTEDDSV 330
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
A+KSG + G PTK IR ++ F + +GSEMSGG++DVR D + S
Sbjct: 331 AIKSGKNPEGNVINRPTKH--IRVFDSVTHFGHGLCIGSEMSGGVEDVRLWDCQMGPTWS 388
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
G+ IK RGG+V+++ VR +T ++
Sbjct: 389 GIEIKATKKRGGYVRNILVRDITASHIQ 416
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDCY+ +GDD +A+KSGWD+YGI++ P+ +I+RR+T +PFS IA+GSEMSGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSEMSGGIRDI 59
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
E+I+ S G+R+KT VGRGG ++++ + + + +G+ G HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 373 ALPVIQNINYRDMVAENV 390
ALPV+ +I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 180/398 (45%), Gaps = 45/398 (11%)
Query: 61 VGDGTTSNTKA-FKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVL 118
V D + S +A + ID S + GG + VP G W + G L S L L + A L
Sbjct: 72 VSDTSLSAARAPIQRVIDMAS---ASGGGIVVVPKGTWQVDGPIRLKSKVNLHLEEGATL 128
Query: 119 LASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--- 174
L S D + PV++ R TE YS LI+ N+ DV ITG GTIDG +
Sbjct: 129 LFSGDPSHYLPVVKT-----RWEGTEVFTYSPLIYALNVEDVAITG-KGTIDGNAQSAFI 182
Query: 175 -WWRK--------------------FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSW 213
W+ K + GE Y RP LI+ +++ + + + T +NSP W
Sbjct: 183 GWYEKQNTDMHALRKMGFDGVPVEKRQFGEGHYLRPPLIQFFHAKRVLLEDYTALNSPFW 242
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
H VY+S V+ + + + + N DG++ +S ED + +GDD + +KSG D
Sbjct: 243 VNHLVYTSHATVRRVKVESHLY--NNDGLDIESSQFVLAEDNHFRTGDDGIVIKSGRDAD 300
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333
G G+P+ ++ R I LGSEMSGGI+ V E+ + +S R K+ +
Sbjct: 301 GRNIGIPSTDIVARNNDLGGEDG--IGLGSEMSGGIKRVFFENNILHEGDSAYRFKSNLD 358
Query: 334 RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMA 393
RGG V+ V +R + + K FW +Y S+ N+ +I D+ ENV
Sbjct: 359 RGGRVEMVRIRGSEVASFKHLFWFQLNYPSNLHGNFPATYTDII----IEDLTVENVGTV 414
Query: 394 ARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
+ P + ++ I+ + L+ N DI+
Sbjct: 415 LEIHAPDAAPVHNVKFKDIKIKEAEEILILE-NADDIS 451
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHKD 115
+ +G T T A A I L + + GG+++ + G +L G +L L + +
Sbjct: 58 DLARLGAKTDGKTDARPAMIKALRQARKWGGARIVLSGGVFLMCGPIHLVDGVCLDIREG 117
Query: 116 AVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L S + + + LP+ T YS +I+G NL DV I G G IDG
Sbjct: 118 ATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCAA 171
Query: 175 WWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLINS 210
+ +RA GE + RP LI++ +N+ I + +INS
Sbjct: 172 TFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINS 231
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W +H + S +VI +G+ A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 232 PFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKSGR 289
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVRIK 329
D G + P++ +IIRR C + +GSEMSGG+++V ED A + G+ IK
Sbjct: 290 DNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYIK 347
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH--PDNNYDPHALPVIQNINYRDMVA 387
T RGG+VK++Y++ ++ ++T Y ++ ++ ++ R A
Sbjct: 348 TNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRKARA 407
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTI 414
+ L+G P + I V I
Sbjct: 408 AGIV----LQGTKAKPIRDVTIRRVEI 430
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 179/402 (44%), Gaps = 69/402 (17%)
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
+ + N A AI+++S +GG + +P G W T + S L + K+A+L S+
Sbjct: 33 EDASRNADAINRAINYISE---KGGGTVVIPDGIWFTAPIEIKSDVELRIEKNAILKFSK 89
Query: 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------- 175
D ++P+I + +Y E R S I N ++ ITG G IDG G++W
Sbjct: 90 DIDQYPLI--ITNY---EGQECIRAKSPITAENAINIGITG-GGVIDGSGDMWRPIKQFK 143
Query: 176 -----WR-----------------------KFRAGE-----------------LKYTRPY 190
W F+ E + RP
Sbjct: 144 ITDRQWEALMKKSQYIIDTKGGGIWMPTESSFKGNEHNIQLDAENALEKASEYYDFYRPV 203
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
++ + + + I + +T NSP+WN+HP + ++ V+ +T+ P + N DGI+ +SC
Sbjct: 204 MVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVESCKKV 263
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
I +C +GDD + +KSG + P + + I ++ +GSEMS GI+
Sbjct: 264 HIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCL-VNEGHGGFVIGSEMSRGIK 322
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-WAFWITGSY------GS 363
+V E+ T + ++ GVRIK+A+GRGG ++++ ++ + M +K A +T SY
Sbjct: 323 NVLVENCTFLGTDVGVRIKSALGRGGVIENINIKNINMVDIKEQAIILTMSYVLNSLNRD 382
Query: 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
N D +P +NIN+ + A +E I P T
Sbjct: 383 EEINGIDKDDIPYFKNINFEGINCLGAKEAVVIEPIKDMPET 424
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 165/382 (43%), Gaps = 58/382 (15%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
GG ++ VP G W +G+ +L S+ L + DA +L S +++P++ + R E
Sbjct: 94 GGGRVIVPAGTWESGAIHLKSNVNLHVQADATILFSTRPQDYPIV-----FTRWEGMELM 148
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW---------------------RKFRA- 181
YS L++ +V +TG GT+DGQ + WW R RA
Sbjct: 149 NYSPLVYAHGQENVALTG-AGTLDGQAGPDNWWSWKGPWNGTVEHGWKEGMADQRPARAR 207
Query: 182 ----------------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GE Y RP ++ + I + L SP W VHPV +V+V
Sbjct: 208 LFQMAEANVSPEKRIFGEGDYLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVV 267
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+G+ I PN DG +P+S IE C +GDDC+AV SG + G P + ++
Sbjct: 268 RGVDIHG--LGPNNDGCDPESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIV 325
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES---GVRIKTAVGRGGFVKDVY 342
IR V+ +GS++SGG + + AE T +DS +R K RGG ++ Y
Sbjct: 326 IRDCRMKEGHGGVV-VGSQISGGARHIYAERCT-MDSPDLWYAIRFKNNALRGGLLEHFY 383
Query: 343 VRRMTM-KTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAG 401
R +T+ + + A +Y D + PV+++I + M +G+ G
Sbjct: 384 FRDLTVGQVSRAAITCDFNYEEGADGPFK----PVLRDILVQRMTVARAARVLDSQGLPG 439
Query: 402 DPFTGICISNVTIELTNKPKKL 423
P + I + + P L
Sbjct: 440 APVGTVRIEDSRFDGVTHPSIL 461
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 66/383 (17%)
Query: 13 ICIILLVGIIISLNTNGVESRKARNSDWFEYSAI---SCRAHSASLEEFGGVGDGTTSNT 69
IC+ L G I + N FE + + + ++ +G DG NT
Sbjct: 14 ICLPFLSGNRICAQEENLIDNSIYNDLPFEMPVVEQPTFPDYEVNIVAYGAKNDGKFLNT 73
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
+A AI ++ ++GG ++ +P G WLTG L S+ L+ ++A++L + D + +P+
Sbjct: 74 EAINNAIKAVN---AKGGGKVIIPEGLWLTGPIVLLSNVNLYTERNALILFTDDFEAYPI 130
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW------------WR 177
I + G +T R S I N ++ ITG GT DG G+ W W
Sbjct: 131 IN---TSFEGLETR--RCQSPISARNAENIAITG-YGTFDGAGDSWRPVKKDKLTASQWG 184
Query: 178 KF----------------RAGELK-------------------------YTRPYLIEIMY 196
K AG LK + RP L+ I+
Sbjct: 185 KLVKSGGVTDSAGKIWYPTAGALKGALACKDFNVPEGINTDEEWNEIRPWLRPVLLNIVK 244
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
S+ + + +T NSPSW +HP+ + V + + P S N D ++ +SC N I +
Sbjct: 245 SKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWYSQNGDALDLESCKNALIINSL 304
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
+GDD + +KSG D G G P + ++++ + + +GSEMSGG++++ D
Sbjct: 305 FDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGHGGFV-VGSEMSGGVKNIYVTD 363
Query: 317 ITAIDSESGVRIKTAVGRGGFVK 339
T + ++ G+R K+ GRGG V+
Sbjct: 364 CTFMGTDVGLRFKSTRGRGGVVE 386
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 182/389 (46%), Gaps = 67/389 (17%)
Query: 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
N KA + AID S+ +GG ++ +P K+LTG+ L S L + + AVL + +
Sbjct: 61 KNQKAIQKAIDLCSK---KGGGRVVIPANQKFLTGAIQLKSSVNLEVQEGAVLEFAFQPE 117
Query: 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWW------- 176
+P++E E S ++ D+ ITG GTIDG G + WW
Sbjct: 118 LYPIVET-----SWEGLECFNLSPCVYAFKAKDIAITG-KGTIDGGGSNDTWWPWNGNPR 171
Query: 177 -------------------------------RKFRAGELKYT-----RPYLIEIMYSQNI 200
+ R+ E +T RP L+ + I
Sbjct: 172 FGWKEGTISQRGGSRARLLKNGEDGVPMYNEKGERSPERVFTAQDGLRPQLVSFNKCEGI 231
Query: 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG 260
+ ++TL+ SP W +HP++S+ + V+ + ++ PN DG +P+ C IEDC+ +G
Sbjct: 232 LLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECCDRVLIEDCFFNTG 289
Query: 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--IT 318
DDC+A+KSG ++ G MP+K +IIR + V+ +GSE+SGG Q+V A D +
Sbjct: 290 DDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHGGVV-VGSEISGGCQNVYAHDCVMD 348
Query: 319 AIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPD---NNYDPHALP 375
+ + E +RIKT RGG ++++ +R +T+ K + H + Y P
Sbjct: 349 SPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDYEHNEICCRGY----YP 404
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPF 404
+++N+ ++ ++ ++ G+ D F
Sbjct: 405 IVRNVYMENVTSQQSQYGVQIIGLDEDTF 433
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 178/387 (45%), Gaps = 43/387 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHKD 115
+ +G T T A A I L + + GG+++ + G +L G +L L + +
Sbjct: 46 DLARLGAKTDGKTDARPAMIKALRQARKWGGARIVLSGGVFLMCGPIHLVDGVCLDIREG 105
Query: 116 AVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L S + + + LP+ T YS +I+G NL DV I G G IDG
Sbjct: 106 ATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCAA 159
Query: 175 WWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLINS 210
+ +RA GE + RP LI++ +N+ I + +INS
Sbjct: 160 TFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINS 219
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W +H + S +VI +G+ A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 220 PFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKSGR 277
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVRIK 329
D G + P++ +IIRR C + +GSEMSGG+++V ED A + G+ IK
Sbjct: 278 DNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYIK 335
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH--PDNNYDPHALPVIQNINYRDMVA 387
T RGG+VK++Y++ ++ ++T Y ++ ++ ++ R A
Sbjct: 336 TNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRARA 395
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTI 414
+ L+G P + I V I
Sbjct: 396 AGIV----LQGTKAKPIRDVTIRRVEI 418
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 34/320 (10%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+ + ID S Q + PPG + G+ L S+ L + +D +L SQ+ ++P
Sbjct: 5 TQLLQREIDQASTVQG----TVITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYP 60
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-------- 180
++ R +++I + +V+I+G G +DG+GE WW+ F
Sbjct: 61 EVD-----NRVAGINMKWPAAMINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGM 114
Query: 181 -----------AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
A + RP I + SQ + I +++ + S WN YS +++ GIT
Sbjct: 115 MADYAKKGLRWAADYDCKRPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGIT 174
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I P+TDGI+ DSC I++ YI DD +++K+G +A +++ I+
Sbjct: 175 I-DNGKGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK-- 231
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
C + + IA+GSE SGGI++++ + + + +G RIK+A RGGF++ V +TMK
Sbjct: 232 DCQLGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMK 291
Query: 350 TMKWAFWITGSYGSHPDNNY 369
+ + F + ++ +PD +Y
Sbjct: 292 DVGFPFLLQTNW--YPDYSY 309
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDCY+ +GDD +A+KSGWD+YGI++ P+ +I+RR+T +PFS IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
E+I+ S G+R+KT VGRGG ++++ + + + +G+ G HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 373 ALPVIQNINYRDMVAENV 390
ALPV+ +I D+V ++
Sbjct: 120 ALPVVGDIAVLDVVGSSI 137
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 34/320 (10%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+ + ID S Q + PPG + G+ L S+ L + +D +L SQ+ ++P
Sbjct: 5 TQLLQREIDQASTVQG----TVITPPGAYQIGALFLKSNVHLIVSEDTILYGSQELADYP 60
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFR-------- 180
++ R +++I + +V+I+G G +DG+GE WW+ F
Sbjct: 61 EVD-----NRVAGINMKWPAAMINVFHAENVMISG-KGKLDGRGETWWQTFWGTDEASGM 114
Query: 181 -----------AGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
A + RP I + SQ + I +++ + S WN YS +++ GIT
Sbjct: 115 MADYTKKGLRWAADYDCKRPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGIT 174
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I P+TDGI+ DSC I++ YI DD +++K+G +A +++ I+
Sbjct: 175 I-DNGKGPSTDGIDIDSCEEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIK-- 231
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
C + + IA+GSE SGGI++++ + + + +G RIK+A RGGF++ V +TMK
Sbjct: 232 DCQLGYGSGIAIGSETSGGIEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMK 291
Query: 350 TMKWAFWITGSYGSHPDNNY 369
+ + F + ++ +PD +Y
Sbjct: 292 DVGFPFLLQTNW--YPDYSY 309
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 50/402 (12%)
Query: 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125
++ TK + AID +S+ +GG + +P G W +G L S+ L L ++AVL + +
Sbjct: 68 SAQTKEIQQAIDAVSK---KGGGTVIIPAGNWHSGRIALKSNVNLHLEENAVLEFGGEIR 124
Query: 126 EW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRK------ 178
++ PV+ + R E + I+ ++ +TG + RK
Sbjct: 125 DYLPVV-----FTRTEGVEVMSLGACIYANGQHNIAVTGKGKLVGPPANCPVRKQVMRQD 179
Query: 179 -----FRAGELKYTR------------PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
A + R P + + +N+ + L L N+P WN+ P+Y
Sbjct: 180 VIENVVAANKPVSQRIYDGHDGGPVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIYCD 239
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+VI++GIT+ + V P+ DGI+ +S N IE C + GDDC +K+G + G+ G PT
Sbjct: 240 NVIIRGITVNS-VGIPSGDGIDIESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPT 298
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
+ ++I R + I +GSE + I+++ D+ D+E G+R KT RGG +++
Sbjct: 299 ENVVI-RYSLARQGHGGITVGSETAAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGENL 357
Query: 342 YVRRMTMKTMKWAF-W-----------ITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
+ R+ M+ AF W + + P N PV +NI +D+V ++
Sbjct: 358 HYERIRMRLRLDAFRWDMLGARMYVGALADRLPALPVNKLT----PVYRNIYAKDIVVDS 413
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431
R++GI P TG + NV T + + N I+
Sbjct: 414 ARALVRVDGIPESPMTGFHLQNVEAHCTKFLQSIDANVISIS 455
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 169/340 (49%), Gaps = 41/340 (12%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFNLTSHF 108
+ ++ + G GD +++ F A ++ + G + VP G +L G + S+
Sbjct: 41 SFQVNVAKLGAKGDSISNSKPFFDKA---MALCKKNNGGTIVVPKGIYFLNGPIHFVSNV 97
Query: 109 TLFLHKDAVLLASQD-EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT 167
L + K A + S + E P++ L S+ T YS LI+ + T++ I+G+ GT
Sbjct: 98 NLKIEKGAKIKFSDNPENYLPMV--LTSW---EGTMIYNYSPLIYAYDCTNIAISGE-GT 151
Query: 168 IDGQGELWWRKFRAGELK------------------------YTRPYLIEIMYSQNIQIS 203
IDG+G W+ F+ E K + RP +I+ +NI +
Sbjct: 152 IDGEGGKTWKSFKDKEGKGKELSREMNHNSIPINERKFGTGYFLRPQMIQFFKCKNILVE 211
Query: 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263
N+ + NSP W +H + S S+ V+GI+ + + N DGI+P+ + IE+ +GDD
Sbjct: 212 NIRIENSPFWCLHLLKSESITVRGISYKS--LNYNNDGIDPEYAKDVLIENVTFNNGDDN 269
Query: 264 VAVKSGWDQYGIA-YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322
+A+K+G D G A P++ +IIR VI GSEMS G+Q+V E+ +
Sbjct: 270 IAIKAGRDHEGRANSATPSENIIIRNCNFKGLHGVVI--GSEMSAGVQNVYVENCKTVGY 327
Query: 323 -ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
+ G+ +KT RGGF+K+V+VR + + ++ +IT +Y
Sbjct: 328 LKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANY 367
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 168/343 (48%), Gaps = 32/343 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T A + AID + GG + + PG +LTG+ + S L +
Sbjct: 85 SANSFGAVADSTVLSTDAIQKAIDSCAL---SGGGTVTLQPGYYLTGALFVKSGVNLQIS 141
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K L+A D +P R E +++I ++G+ GT+D +G+
Sbjct: 142 KGVTLIACSDIHCYPEFR-----SRIAGIEMVWPAAVINIIGEEKASVSGE-GTLDCRGK 195
Query: 174 LWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ A +Y L I + S ++ +SN TL+ + W +YS
Sbjct: 196 IFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVENSSDVTLSNFTLMRTGFWGCQILYS 255
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
V G+ I + P+TDGI+ DS TN IE+C I DD + +K+G D G+
Sbjct: 256 DHCTVDGLIINNNIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDADGLRVN 315
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
PT+ ++IR T + +I GSE SGGI++V A D+ A + + +++K+A+ RGG +
Sbjct: 316 RPTENIVIRNCT-VHKGGGLITCGSETSGGIRNVLAHDLKAFGTSNVLQLKSAMTRGGVI 374
Query: 339 KDVYVRRMTMKTMKWAF-----WITG-SYGSHPDNNYDPHALP 375
+++Y+ R+ K ++ F W SY + P+ NY LP
Sbjct: 375 ENIYITRVEAKNVRRIFGADPNWNPKYSYSTLPE-NYKGKELP 416
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 52/400 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLH 113
+ E+G D + A AI+ + ++GG + +P G + + G+ L S+ L +
Sbjct: 53 VTEYGAKDDTAFDSRPAILKAINQCN---TDGGGTVLIPAGNYFIKGAITLKSNINLHIA 109
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+ A L S + ++ P++ + TE YS I+ T+V +TG GTIDG G
Sbjct: 110 EGARLEFSTEAADYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVAVTG-KGTIDGNG 163
Query: 173 ELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLI 208
+ + + A GE Y RP +I+ +N+ + +L +
Sbjct: 164 SVTFNDWHAIQGPAVDRLRQMGIDSVPVYERVFGEGHYLRPCMIQFYGCKNVLVEDLKIY 223
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SP W +HPV+ +V V+ + I + + N DG +P+S TN IE GDD +A+KS
Sbjct: 224 DSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIEGMDFNVGDDGIAIKS 281
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVR 327
G DQ G G T+ +IIR F+ I +GSEMSGG++++ ED +G+
Sbjct: 282 GRDQDGWRIGQATENVIIRNCH----FARWAITIGSEMSGGVRNIYIEDCKIDSCRNGIY 337
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAF--WITGSYGSHPDNNYDPHALPVIQNINYRDM 385
K+ + RGG+ +++ +RR+ W + T +G N+ + +NI D+
Sbjct: 338 FKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNH-----PTLFRNICIEDV 392
Query: 386 VAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
V ++A G+ I + N+T++ PK +Q
Sbjct: 393 TCNRVDSVALMANGLPEAKLYDITLRNITVK--KAPKAIQ 430
>gi|315570520|gb|ADU33264.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 407
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 171/352 (48%), Gaps = 25/352 (7%)
Query: 45 AISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL 104
+++ A ++ +FG G ++T A AID S + GG F G++L+G F L
Sbjct: 15 SLTASATVYNVTDFGADSTGKNASTTAITKAIDKAS--EDYGGVVRFTK-GQYLSGPFEL 71
Query: 105 TSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164
S+ TL D VL D KE+P + L G T Y+ LI + +VVI G
Sbjct: 72 KSNITLQFDDDVVLKFLDDPKEYPPLTKLLPNGL---TFSLPYTPLIRAFIVRNVVIRG- 127
Query: 165 NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
+DG G WW++ RP + S NI + ++ + NSP +N+ +Y+ V+
Sbjct: 128 KAILDGNGAPWWKRLPPPN---ARPQFLFFYQSYNITVEDVAIRNSPMYNIQLIYTDHVL 184
Query: 225 VQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
++GI+I P + PNTDGIN + C + + + +GDDCVA+ + + P
Sbjct: 185 LKGISIKNPPSYVDPGPNTDGINCNPCRYLHVTNVTVDTGDDCVALDADLGDKLMGR-WP 243
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
T+ ++I + AV ++GS + G++++ + ++ G+ IKT GRGG V+D
Sbjct: 244 TEHILIENSHMFAGHGAV-SIGSATTAGLRNITVRNCIFNGTDRGLYIKTRRGRGGLVED 302
Query: 341 VYVRRMTMKTM-KWAFWITGSY-----GSHPDN-NYDP--HALPVIQNINYR 383
++ +TM + K I Y G H N ++ P P I+NI YR
Sbjct: 303 IHYHNITMLNIRKEGVAIAAVYNGTDEGMHERNIHWVPIDDTTPFIRNIRYR 354
>gi|413925950|gb|AFW65882.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 163
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 78/109 (71%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FGGVGDG T NT AF+ A+ + + GG+ L VP G WL GSFNLTSH TLFL
Sbjct: 51 SIADFGGVGDGRTLNTWAFRKAVYRIQHQRRRGGTTLHVPAGTWLAGSFNLTSHMTLFLA 110
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162
+ AVL A+QD + WP++EPLPSYGRGR+ G RY+S I G L DVVIT
Sbjct: 111 RGAVLKATQDTRGWPLVEPLPSYGRGRELPGPRYASFIHGDGLRDVVIT 159
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 679
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 680 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 737
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 738 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 797
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 798 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 679
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 680 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 737
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 738 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 797
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 798 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 679
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 680 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 737
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 738 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 797
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 798 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 569 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 623
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 624 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 679
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 680 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 737
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 738 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 797
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 798 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 854
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 571 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 625
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 626 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 681
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 682 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 739
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 740 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 799
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 800 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 856
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 174/391 (44%), Gaps = 63/391 (16%)
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
NT A + AID + + GG + VP G +LT L ++ L L KDA L+AS + +
Sbjct: 53 NTDAIQKAIDDCA---AAGGGTVLVPKGNFLTNPLFLKNNIQLKLEKDATLVASTEVAAY 109
Query: 128 PVIEPLPSYGRGRDTEGGRYSS-------LIFGTNLTDVVITGDNGTIDGQGELWWRKFR 180
RG D RY+ I + +V I G+ GTIDGQG +WW ++R
Sbjct: 110 ----------RGDDKT--RYAEAENGWLPFISIADAQNVAIVGE-GTIDGQGAVWWERWR 156
Query: 181 AGELKYT-------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
++ T RP LI I + N+ I +TL +SPS++V Y+ V + G IL+P
Sbjct: 157 E-NIRATGKKGGTDRPRLIYITRASNVLIDGVTLTHSPSFHVVTRYAHDVDINGTRILSP 215
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
+PNTD I+P N RI + YI DD +A+K+ G+ + I T
Sbjct: 216 WHAPNTDAIDPIDSQNIRITNNYIDCNDDHIAIKAEKADPRFPDGV-VDNIYIANNTLKQ 274
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353
I++GSE +GG+ +V E+ T S G+RIK+ G+GG VK++ M ++
Sbjct: 275 --GRGISIGSESAGGVNNVLVENNTFEGSMYGIRIKSPRGKGGEVKNIVYSNTRMHNVEV 332
Query: 354 AFWITGSY----------------------------GSHPDNNYDPHALPVIQNINYRDM 385
+ Y S P +D + P NI ++
Sbjct: 333 PLVFSAYYKAAPIVQAEVDKLLQAGGFTLGEQIYPPDSDPKQPFDKYKTPHFSNITVENL 392
Query: 386 VAE-NVTMAARLEGIAGDPFTGICISNVTIE 415
+ + AA + G P +G SNV IE
Sbjct: 393 TSTGDSKAAAYIIGTPEAPLSGFHFSNVNIE 423
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 86 GGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YGRGRDTE 143
GG + + G +L G+ L S L L KDA LL S ++ LP + R TE
Sbjct: 552 GGGHVIISKGIYYLKGNLVLKSDVNLHLEKDAYLLFSGKADDF-----LPEVWTRWEGTE 606
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---------------------- 181
+S +I+ + T++ ITG GTID QG R+F +
Sbjct: 607 LYGHSPMIYAKHATNIAITG-QGTIDAQGG---REFASWSQIEVSDRNRLRKMGEKLIPV 662
Query: 182 -----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
G+ RP I+ M I + +T+ NSP W +HPVY +VIV+ ITI +
Sbjct: 663 TERIFGKGTILRPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITIDSHY-- 720
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +P+S +N IE+C +GDD +A+K+G D G G P+K ++IR S +
Sbjct: 721 PNNDGCDPESTSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECN 780
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ +GSEMSGG++++ ++I ++ + K+ RGG+++++ V +T++ K A
Sbjct: 781 G-LCIGSEMSGGVENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGA 837
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 175/373 (46%), Gaps = 40/373 (10%)
Query: 65 TTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDE 124
T T + AID R ++GG QL + G ++T L S L L AVL +
Sbjct: 47 TADATSLLQQAID---RCSAKGGGQLRLAAGVFMTAPLALRSGVDLHLDAGAVLRGVAGQ 103
Query: 125 KEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE 183
+ + P P R+ + G + V G+IDG G+ WW + +
Sbjct: 104 QHYRPAYMNWPY----------RFGEALLGMDGVRHVRISGEGSIDGFGQQWWPQAQQAR 153
Query: 184 L---KYT------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGI 228
L K T RP+LIEI S +++I + +IN+P WN+ YS + ++G+
Sbjct: 154 LTGEKQTLALGIPASNGLPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGV 213
Query: 229 TILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288
+IL P SPNTDGI+ + + RI D I +GDDC+A+KSG +P + + R
Sbjct: 214 SILNPADSPNTDGIDVVASRHVRIRDSRISTGDDCIAIKSGLP----GSRLPAEATVDVR 269
Query: 289 LTCI-SPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMT 347
+ + +++GSE GI+ V D+ +++GVRIK+ RG + D++ R +
Sbjct: 270 IDHLWLGRGHGLSVGSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLR 329
Query: 348 MKTMKWAFWITGSYGSHPDNNYDP-----HALPVIQNINYRDMVAENVTMAARLEGIAGD 402
MK + A + Y P DP P I +++ D+ AE +A L G+
Sbjct: 330 MKGVGTAISVLAYY-PKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPES 388
Query: 403 PFTGICISNVTIE 415
P GI + +++++
Sbjct: 389 PLRGIRLGHLSLQ 401
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 186/409 (45%), Gaps = 69/409 (16%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G DG T++ A + AI S GG + + G WL+G +L +H TL L + +
Sbjct: 17 YGARHDGRTNDGPAIQRAITACSE---AGGGMVSLTSGTWLSGPLSLKNHVTLNLGQGST 73
Query: 118 LLASQDEK--EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-L 174
LL S D + W + G+ + G +L+ ++ DV ITG G IDG G +
Sbjct: 74 LLGSSDTRLFHWAFL--------GKAAQPGE--ALVSAIDVQDVAITG-QGHIDGNGAAV 122
Query: 175 WW-RKFRA------GELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWN 214
WW + RA G L Y RP+LIE + Q+ +IS +T NSP W
Sbjct: 123 WWPQAVRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWT 182
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
V SS + + +TI P +S NTDGI+ S + + I +GDD +A+KSG Q G
Sbjct: 183 VVVRESSQIKIDHLTIRNPASSRNTDGIDLVSSDHVTMSTLDIATGDDNIAIKSGLRQPG 242
Query: 275 IAYGMPTKQLIIRRLTCISPFSAV------IALGSEMSGGIQDVRAEDITAIDSESGVRI 328
R ++ IS + +++GSE++ G +R D++ ++ SG+RI
Sbjct: 243 ------------RAVSDISITQSRFGEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRI 290
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY------DPHA-----LPVI 377
K+ RGG + + + M ++ I+ Y P DP A P I
Sbjct: 291 KSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGTQKTVSMTDPAAPVTSTTPHI 350
Query: 378 QNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWN 426
++ D+ A+N A + G+ P G+ + N+ + K LQ++
Sbjct: 351 HDVTITDLTAKNAETAGVVLGLPEAPIEGLTLRNIRLSAR---KGLQFS 396
>gi|372221526|ref|ZP_09499947.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 487
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 35/381 (9%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG +NTKA + AID + + GG + PG +L+GS L + L L K+
Sbjct: 58 DFGAQSKVGFTNTKAIQTAIDSCA---ASGGGIVKFRPGTYLSGSIFLKDNVQLHLDKEV 114
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LL SQ+ ++ I R E ++L+ + +V+I+G+ GTIDGQG+++W
Sbjct: 115 TLLGSQNILDYKEIAT-----RVAGIEMEWPAALVNAIDTQNVLISGE-GTIDGQGKVFW 168
Query: 177 ------RK--FRAGELKY------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
RK + L++ RP + I S+N+ + +LTL + W V +YS
Sbjct: 169 DMYWDMRKNDYEPKGLRWIVDYDAKRPRTVLIQNSKNVIVRDLTLQRAGFWTVQILYSKH 228
Query: 223 VIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
V G+TI + P+TDGI+ DS + +++C I DD +K+G D G+ P
Sbjct: 229 VTTDGLTIRNNIGGHGPSTDGIDIDSSSYILVQNCDIDCNDDNFCLKAGRDWDGLRVNRP 288
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
T+ ++I+ + ++ +GSE SGGI+ + A +I +++G+++K+A RGG ++D
Sbjct: 289 TEYVVIKDCKT-GKGAGLLTVGSETSGGIRHIYANNIQGKGTDAGLKLKSATTRGGVIED 347
Query: 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN-VTMAARLEGI 399
+ M M ++ +++ S +P Y LP NI D V E+ TM +
Sbjct: 348 IIFDNMKMDSV--GTFLSISMNWNP--TYSYSKLPKEYNI---DEVPEHWKTMLNTVPEQ 400
Query: 400 AGDP-FTGICISNVTIELTNK 419
G P F I ++NV ++ NK
Sbjct: 401 QGIPQFKNIVLNNVLVKHANK 421
>gi|393786392|ref|ZP_10374528.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
gi|392660021|gb|EIY53638.1| hypothetical protein HMPREF1068_00808 [Bacteroides nordii
CL02T12C05]
Length = 477
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 195/438 (44%), Gaps = 54/438 (12%)
Query: 18 LVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSA-----SLEEFGGVGDGTTSNTKAF 72
L+G+ +S+ + V ++ A D+ + + ++ ++G GD NT A
Sbjct: 10 LIGVFLSVISFNVTAQTANIPDFPWMKEVGAKTFPVQQTVYNVTDYGAKGDALEMNTTAI 69
Query: 73 KAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEP 132
+ AID + GG + PG +LTG+ + ++ + K L+ SQD ++ I+
Sbjct: 70 QKAIDAA---EQAGGGIVTFSPGIYLTGALFVGNNVNFNIPKGTTLIGSQDIDDYKKIDT 126
Query: 133 LPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKY------ 186
R E S+L+ + I+GD G I+G+G+++W K+R+ +Y
Sbjct: 127 -----RVAGVEMNWPSALVNIIGKKNAAISGD-GVINGRGKVFWDKYRSMRKEYDPKGLR 180
Query: 187 -------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS--P 237
RP I I +N+ + N+ L W++H +YS V V GI I + P
Sbjct: 181 WIVDYDCERPRGILIAECENVTVENIVLYQPGFWSLHILYSKYVTVDGIIISNNIEGRGP 240
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-S 296
+TDGI+ DS +++ I DD +K+G D G+ P + ++IR CI+
Sbjct: 241 STDGIDIDSSEYILVQNSNINCNDDNFCLKAGRDSDGLRVNRPCRYVVIR--DCIAGHGD 298
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF- 355
+ GSE SGGI ++ A ++T + ++ G+R K+ RGG ++D+Y+ + M ++ F
Sbjct: 299 GLFTCGSETSGGINNIVAYNMTGMGTKYGLRFKSTCQRGGVIEDIYLCNIEMIGVRDPFV 358
Query: 356 ----WITGSYGSHPDNNYDPHALPV-----------------IQNINYRDMVAENVTMAA 394
W S YD +P +N+++ ++ A N
Sbjct: 359 VDLNWHPAYSTSKLPEGYDEKNVPTHWIKMLTPVDPKQGTPKFRNVHFMNVTATNAQTCI 418
Query: 395 RLEGIAGDPFTGICISNV 412
++ GI G NV
Sbjct: 419 KVSGIENSTIDGFDFDNV 436
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDCY+ +GDD +A+KSGWD+YGI++ P+ +I+RR+T +PFS IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
E+I+ S G+R+KT VGRGG ++++ + + + +G+ G HPD Y+P
Sbjct: 60 LVENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 373 ALPVIQNINYRDMVAENV 390
ALPV+ +I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 198/471 (42%), Gaps = 79/471 (16%)
Query: 12 VICIILLVGIIISLNTNGVESR--KARNSDWF--EYSAISCRAHSASLEEFGGVGDGTTS 67
+ +IL I++ NT+ +S+ + RN + E + + ++ +FG V +
Sbjct: 14 MFSLILCSNRIVAQNTSKSKSKVSEERNLPFNMPEVQIPKFKKDTLNIVDFGAVPNTGEL 73
Query: 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127
TKA AI S GG + +P G W TG L S+ L A +L + D ++
Sbjct: 74 CTKAINDAIMKCSE---SGGGVVAIPSGLWTTGPIYLKSNVNLHTQNGAYILFTSDLNQY 130
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGEL--- 184
+I SY G R S I G L ++ ITG G DG G W R + G++
Sbjct: 131 KLIN---SYFEGNKVI--RCESPIMGVGLENIAITG-KGIFDGNGSKW-RPVKIGKMSDE 183
Query: 185 ------------------------------------------------KYTRPYLIEIMY 196
+ RP ++ ++
Sbjct: 184 QWKNMVNSGGILSKDRKTWYPSEEALIGNEQKDKLPKVPSIENMKPYKQALRPVMVSLVN 243
Query: 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY 256
+ + + +T NSP+WNV+P+ +V + + I P S N DG++ +SC + +C
Sbjct: 244 CKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLESCRIGTVTNCR 303
Query: 257 IVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316
GDD + +KSG DQ G G PT+ +I+ + +GSEMSGG++++ ++
Sbjct: 304 FDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGFV-IGSEMSGGVRNLFIKN 362
Query: 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDP----- 371
+T I ++ G+R K+ GRGG V+++++ + M + Y + DP
Sbjct: 363 LTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSDIPTEAIRFEMYYFNKSGVEDPLTGEM 422
Query: 372 --------HALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
PV +N+ ++++ + A ++ GI P I N+ +
Sbjct: 423 IVEKVPVSETTPVFKNMYFKNIYVDGAKQALKIMGIPEMPVENIQFKNMIV 473
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 54/370 (14%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T+A AID S ++GG + +P G + T L S+ L L VL D +P
Sbjct: 63 TEAISRAIDTCS---AQGGGTVLIPNGTYRTAPIRLKSNVNLHLSDSTVLQFVTDPALFP 119
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WW---------- 176
+ R + S LI+ T++ +TG G +DGQ + W+
Sbjct: 120 TV-----LTRIEGIDCHNVSPLIYAYGETNIALTG-KGILDGQADTSNWFSPARLKSIDE 173
Query: 177 ----------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWN 214
R+ AGE K RP I + +NI + TL SP W
Sbjct: 174 NGKEINEKTLLYQMMKDSIPASRRVFAGE-KGIRPQFINLYKCKNILLEGFTLHRSPFWL 232
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HP+ S ++ V+ + + + N DG +P+SC N I+ C +GDDC+A+KSG D+ G
Sbjct: 233 IHPLLSENITVRKVILQS--HGRNNDGCDPESCKNVLIDSCSFDTGDDCIAIKSGRDEDG 290
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAV 332
+ +P++ +I+R + A +A+GSE++GG Q+V E+ + + + + +RIK+
Sbjct: 291 RYWNIPSENIIVRNCL-MKDGHAGVAIGSEITGGCQNVWVENCRMDSPELDRIIRIKSNS 349
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFW-ITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
RGG VK+++VR +T+ K + I +Y D Y P+ NI+ ++ ++
Sbjct: 350 ERGGEVKNIFVRDITVGECKESILGIELNYWHVEDGPYPPY----FHNIHLENITSQKSN 405
Query: 392 MAARLEGIAG 401
++G G
Sbjct: 406 YLLHIDGTEG 415
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV 312
EDCY+ +GDD +A+KSGWD+YGI++ P+ +I+RR+T +PFS IA+GSE SGGI+D+
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSG-IAIGSETSGGIRDI 59
Query: 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPH 372
E+I+ S G+R+KT VGRGG ++++ + + + +G+ G HPD Y+P
Sbjct: 60 LVENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPM 119
Query: 373 ALPVIQNINYRDMVAENV 390
ALPV+ +I ++V ++
Sbjct: 120 ALPVVGDIAVLNVVGSSI 137
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 183/382 (47%), Gaps = 73/382 (19%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFLH 113
+ + G VGDG T +++A ++A+ ++ +P + ++G NLTS+ L
Sbjct: 381 VADHGAVGDGQTDDSRALRSAL--------AACDEVVIPRHRSCVSGPLNLTSN--QVLR 430
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDT-------------EGGRYSSLIFGT-NLTDV 159
D LLAS ++P++EP+ YG RDT EG R + + G N ++V
Sbjct: 431 VDGALLASTIPAQYPLMEPVVGYGWSRDTNCFPANSTRRGFREGARRHAPVVGAYNASNV 490
Query: 160 VITGDNGTIDGQ-GEL--WW------RKFRAGE----------LKYTRPYLIEIMYSQNI 200
+ G G IDG+ GE WW R R + L +RP L+E Y +
Sbjct: 491 SVVG-GGVIDGRAGEPLGWWDNCTRCRGARPPDPAFPPDEAFCLAASRPKLLEFQYVTGL 549
Query: 201 QISN------LTLINSPSWNVHPVYSSSVIVQGITILAPVTSP---NTDGINPDSCTNTR 251
++ L L +SP W + P YS +V V+ + I AP+ +P NTDG+
Sbjct: 550 TVAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTPGIGNTDGV--------- 600
Query: 252 IEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV----IALGSEMSG 307
E+ Y+ + DD V +KSG D +GI +PT+ +++R +TC A+GSEMSG
Sbjct: 601 -ENVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNITCGDRRDDAGRGGFAVGSEMSG 659
Query: 308 GIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVR--RMTMKTMKWAFWITGSYGS 363
G+++V D + A G+ +KT+VGRGG++ DV R K + +
Sbjct: 660 GVRNVTFRDSVLGAGPQSRGIDVKTSVGRGGYIIDVTFENIRAPSPFPKANVNVHSALRD 719
Query: 364 HPDNNYDPHALPVIQNINYRDM 385
PD D +PVI N+ + ++
Sbjct: 720 DPDVPGD-DLVPVIGNLRFANV 740
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 44/390 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ + G GDG+T +T A + A+D S GG ++ VP G++LTG+ + S+ L +
Sbjct: 42 NVRDLGATGDGSTKDTVAMQLALDRCSVL---GGGEVLVPAGEYLTGALRIHSNTVLRIE 98
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+ A L S D ++P + GR +G YS+ I + +V I G G I
Sbjct: 99 EGASLNGSPDIGDYPFTQ---VRWEGRWIKG--YSAFISAQDGENVTIIG-KGKIVASPA 152
Query: 174 LWWRKFRA--GELKYTRPY-----------------------LIEIMYSQNIQISNLTLI 208
+ R A + YTRP L+E + +N+ + ++
Sbjct: 153 IKGRVVHADGSPMVYTRPAAGTAPNPDGPTNVARRDIMRNPALMEFTHCRNVLVQDVFTQ 212
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+ W+ HPVY +V + +T+ + DGI+ DSC I+ C V+ DDC+++KS
Sbjct: 213 GNDMWSTHPVYCENVTFRNVTVHS-----GADGIDVDSCKGVVIDGCEFVTRDDCISLKS 267
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES-GVR 327
G G G+ + + I T A I +GSE SGGI++V E + + + +
Sbjct: 268 GRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGGIRNVHVEHCKCLGARTFAIY 327
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFW---ITGSYGSHPDNNYDPHALPVIQNINYRD 384
IK+ GRG F++D+Y+ + + + F I S PD +P I+N ++ +
Sbjct: 328 IKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQDPDPVPGDDGIPTIRNFHFSN 387
Query: 385 MVAENVTMAARLEGI-AGDPFTGICISNVT 413
+ ++V + I P G ++NVT
Sbjct: 388 IRVKDVPVLVDGASIHPRKPLEGFSLTNVT 417
>gi|383114418|ref|ZP_09935182.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
gi|313693875|gb|EFS30710.1| hypothetical protein BSGG_1410 [Bacteroides sp. D2]
Length = 487
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 27/311 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTHAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFVKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS++ +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASENIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREDYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+TA + + +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLTAYGTGTTLRLKSSMNRGGTVEN 345
Query: 341 VYVRRMTMKTM 351
+Y+ R+ ++
Sbjct: 346 IYMTRVVADSI 356
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 179/388 (46%), Gaps = 58/388 (14%)
Query: 63 DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQ 122
DG T++ A + AI S GG + + G WL+G +L +H TL L K + LL S
Sbjct: 61 DGRTNDGPAIQRAITACSE---AGGGVVSLASGIWLSGPLSLKNHVTLNLEKGSTLLGSS 117
Query: 123 DEK--EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-LWW-RK 178
D + W + G+ + G +L+ ++ DV ITG G IDG G +WW +
Sbjct: 118 DTRLFHWAFL--------GKAAQPGE--ALVSAIDVQDVAITG-QGHIDGNGAAVWWPQA 166
Query: 179 FRA------GELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
RA G L Y RP+LIE + Q+ +IS +T NSP W V
Sbjct: 167 VRAHKTQTSGPLPYGPDYPGVPAANGLPRPWLIEFSHVQHGRISGVTATNSPMWTVVVRE 226
Query: 220 SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279
SS + + +TI P +S NTDGI+ S + + + I +GDD +A+KSG Q G A
Sbjct: 227 SSQIRIDHLTIRNPASSRNTDGIDLVSSDHVTMSNLEIATGDDNIAIKSGLTQPGQA--- 283
Query: 280 PTKQLIIRRLTCISPFSA--VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
+ I + S F +++GSE++ G +R D++ ++ SG+RIK+ RGG
Sbjct: 284 -ASDISITQ----SRFGEGHGLSIGSELANGAHHIRISDVSFQNTLSGLRIKSGRDRGGD 338
Query: 338 VKDVYVRRMTMKTMKWAFWITGSYGSHPDNNY------DPHA-----LPVIQNINYRDMV 386
+ + +TM ++ I+ Y P +P A P I ++ DM
Sbjct: 339 IGWISAEHLTMDHVRVPLSISDYYAGQPGGTQQTALMTEPAAPVTSTTPHIHDVTITDMT 398
Query: 387 AENVTMAARLEGIAGDPFTGICISNVTI 414
A N + G+ P G+ + +V +
Sbjct: 399 ATNAGTVGVVLGLPEAPIEGLTLRHVRL 426
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 170/370 (45%), Gaps = 54/370 (14%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T A AI+ S+ +GG + +P G W TG L S+ L L A LL S D + +P
Sbjct: 64 TAAINEAINTCSQ---QGGGHVIIPDGTWKTGPIRLKSNVDLHLSDKAHLLFSTDPRIFP 120
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WWRKFRA----- 181
+ R + S LI+ ++ ITG G +DGQ + W +K R
Sbjct: 121 TV-----LTREEGIDCYNISPLIYAYGEKNIAITG-KGIMDGQSDETNWQKKERRNIQKD 174
Query: 182 -----GE----LKYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNV 215
GE L+Y RP + +N+ I T SP W +
Sbjct: 175 SKGKIGERNLLLEYKVNRTPIEQRRFEGMMGMRPQFVNTYKCENVLIEGPTFNRSPFWIL 234
Query: 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
HP+ S +VIV+ + + + N DG +P+SC N IE C +GDDC+A+KSG D+ G
Sbjct: 235 HPLLSKNVIVRDVNLDS--HGRNNDGCDPESCENVLIERCRFNTGDDCIAIKSGKDEDGR 292
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES---GVRIKTAV 332
+ +P+K +IIR + A + +GSE++GG ++V E+ +DS + +RIK+
Sbjct: 293 VWNIPSKNIIIRNCE-MKDGHAGVGIGSEITGGCENVWVEN-CKMDSPNLTRVIRIKSNP 350
Query: 333 GRGGFVKDVYVRRMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT 391
RGG VK++YVR + + A I Y P Y +P + + ++ +
Sbjct: 351 ERGGEVKNLYVRNVEVGVCDLAVLGIEQKYWYTPTGPY----MPYFHDFYFENVKSSGSK 406
Query: 392 MAARLEGIAG 401
A ++G G
Sbjct: 407 YALHIDGHEG 416
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 171/334 (51%), Gaps = 29/334 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T+ ++AID +GG + +P G + G+ + S L L K
Sbjct: 59 DFGLKSDTSVLSTRFVQSAIDAC---HEKGGGTVIIPSGVYRIGALFIKSGVNLHLSKGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS+D +++P PS G E S+++ + + +TG+ G ID +G+++W
Sbjct: 116 TLIASEDIRDYP---EFPSRIAG--IEMTWPSAVLNIMDAENAALTGE-GFIDCRGKVFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ +Y + L I + S++I + + TL+ + W +YS
Sbjct: 170 DKYWEMRKEYEKKKLRWIVDYDCKRVRGILVSNSKHITLKDFTLVRTGFWACQILYSDHC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 230 SVDGVTINNNVGGHGPSTDGIDIDSSTNILVENCEVDCNDDNICIKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341
+ ++IR T + ++ GSE SG I++V A D+ A + + +R+K+++ RGG V+++
Sbjct: 290 ENVVIRNCTA-RKGAGLVTCGSETSGSIRNVLAYDLKAYGTGAALRLKSSMNRGGTVENI 348
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALP 375
Y+ R+ ++K+ + G + + Y ALP
Sbjct: 349 YMTRVKADSVKYVLAV----GLNWNPKYSYSALP 378
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHKD 115
+ +G T T A A I L + + G +++ + G +L G +L L + +
Sbjct: 46 DLARLGAKTDGKTDARPAMIKALRQARKWGRARIVLSGGVFLMCGPIHLVDGVCLDIREG 105
Query: 116 AVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
A L S + + + LP+ T YS +I+G NL DV I G G IDG
Sbjct: 106 ATLRFSPEPRFY-----LPTVATSWEGTFLNNYSPMIYGRNLHDVSIVG-KGLIDGNCAA 159
Query: 175 WWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLINS 210
+ +RA GE + RP LI++ +N+ I + +INS
Sbjct: 160 TFATWRARQKEGQTLSRRMNHEERPLAERNFGEGHWLRPQLIQLFGCRNVTIEGVKIINS 219
Query: 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270
P W +H + S +VI +G+ A + N DGI+P+S N IED +GDD VA+KSG
Sbjct: 220 PFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPESSRNVLIEDVSFDNGDDNVAIKSGR 277
Query: 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVRIK 329
D G + P++ +IIRR C + +GSEMSGG+++V ED A + G+ IK
Sbjct: 278 DNDGWTHAHPSENIIIRR--CRFKGLHAVVIGSEMSGGVRNVFVEDCDFAGYCKRGLYIK 335
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH--PDNNYDPHALPVIQNINYRDMVA 387
T RGG+VK++Y++ ++ ++T Y ++ ++ ++ R A
Sbjct: 336 TNPDRGGYVKNIYMKDCRFDEVEDLIYVTSMYAGEGLGSRHFSEVEHLLVDGVSCRRARA 395
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTI 414
+ L+G P + I V I
Sbjct: 396 AGIV----LQGTKAKPIRDVTIRRVEI 418
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 148/317 (46%), Gaps = 11/317 (3%)
Query: 87 GSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146
G L +P G+WL+G L SH L + L A + +P++ + GR T G
Sbjct: 114 GGTLRIPAGRWLSGPIFLKSHMALLVEDGGELAAIASRENFPILPARHADGRILGTWEGV 173
Query: 147 ----YSSLIFGTNLTDV-VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQ 201
Y+SLI + V + G WW + R + + +++
Sbjct: 174 AEACYASLINAIDCRGVHLAGAGIIDGGGDRGDWWSWPKETRQGARRARTVFLSACEDVT 233
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
+S LT+ NSPSW VHPV +I +TI SPNTDG NP+S ++ R+ +I GD
Sbjct: 234 LSGLTIRNSPSWTVHPVLCKGLIAADLTIENDPDSPNTDGFNPESSSDIRLVGLHISVGD 293
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321
DC+A+K+G PT+ + I AV+ +GSEMS GI D+ +
Sbjct: 294 DCIALKAGKRSPLGGPDRPTEHVRIENCLMERGHGAVV-IGSEMSAGISDIAIRNCHFKG 352
Query: 322 SESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPD--NNY--DPHALPV- 376
++ G+RIKT GRGG V D+ + M+ + + Y D +NY LPV
Sbjct: 353 TDRGLRIKTRRGRGGLVADIRLSDSLMEDVATPVAVNSFYFCDADGQSNYVQSRSPLPVS 412
Query: 377 IQNINYRDMVAENVTMA 393
++ + R + ENVT++
Sbjct: 413 VETPSIRSITVENVTVS 429
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 178/387 (45%), Gaps = 47/387 (12%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKD 115
+ G +GT + AF AI R ++ G ++ VP G + L G L S+ + L +
Sbjct: 57 KMGARNNGTYNCLPAFNKAI---RRASAKKGVKIIVPKGTYYLCGPIVLRSNVCIDLQEG 113
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--- 172
AVL + D K +P++ T +S I+G + +V ITG GTIDG
Sbjct: 114 AVLKFAPDAKYYPMVNT-----SWEGTFLYNHSPFIYGYQVENVAITG-KGTIDGNAMTT 167
Query: 173 -----------------------ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209
+ RKF G+ ++ RP LI++ S+NI + + +IN
Sbjct: 168 FATWRPKQKPAQLLSRQQNHEEVPIVQRKF--GQGQWLRPQLIQLYQSKNITLEGVKIIN 225
Query: 210 SPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
SP W +H + S ++I + + A + N DGI+P+ N IED + +GDD VA+KSG
Sbjct: 226 SPFWCIHLLKSENIICRRLRYDAKLV--NNDGIDPEMSRNILIEDIHFNNGDDNVAIKSG 283
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVRI 328
D G P + ++IR C + +GSEMS G+++V E+ A + GV I
Sbjct: 284 RDNDGWHDACPAENIVIR--NCHFKGLHAVVIGSEMSAGVRNVFVENCDYAGYCKRGVFI 341
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAE 388
KT RGGFV ++V ++ F++T Y + I+++ + A
Sbjct: 342 KTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAGE---GQESMHFSTIEHLYVDGLSAR 398
Query: 389 NVTMAAR-LEGIAGDPFTGICISNVTI 414
V AA L+G + P + + + +
Sbjct: 399 KVRAAALVLQGTSAKPVQHVSFNAIEV 425
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 58/310 (18%)
Query: 150 LIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAGELKY--------------------- 186
LI+ +++ ITG G IDGQG E WW G +KY
Sbjct: 52 LIYAYGESNIAITG-KGIIDGQGSMETWWPM--CGAVKYGWKEGMVAQRNGGRERLLMYG 108
Query: 187 ----------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITI 230
RP L+ + I I +TL+NSP W +HP++ S+IV G+T+
Sbjct: 109 ETSTPVYKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTV 168
Query: 231 LAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLT 290
PN DG +P+SC N IE+C +GDDC+A+KSG ++ G + +P++ +I+R
Sbjct: 169 FN--RGPNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCM 226
Query: 291 CISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM 348
+ V+ +GSE+SGG +++ ED + + + + +RIKT+ RGG +++V+VR +T+
Sbjct: 227 MRNGHGGVV-IGSEISGGYRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTV 285
Query: 349 KTMKWA-FWITGSYGSHP--DNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
+ A I Y + +D P+++N++ +++ E + + G+ D
Sbjct: 286 GQCREAVLRINLQYENREKCKRGFD----PIVRNVHLKNVTCEKSKLGVLIIGLEDDKH- 340
Query: 406 GICISNVTIE 415
+ N+++E
Sbjct: 341 ---VYNISVE 347
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 47/394 (11%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWL-TGSFNLTSHFTLFLH 113
+ +G V DG+T + F+ AI + + GG ++ G +L G +L + L++
Sbjct: 38 VHHYGAVPDGSTDALEGFRLAI---AAARDAGGGRVVAKGGTFLLRGGLDLYDNVQLYVA 94
Query: 114 KDAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGD---NGTID 169
K L + D + LP+ + TE Y LI +V + G N +D
Sbjct: 95 KRTTLRWAADRTGF-----LPAVLTKFEGTELFNYHPLIRAFEAENVSVVGADPANSVLD 149
Query: 170 GQGELW-------WRKFRAGEL--------------KYTRPYLIEIMYSQNIQISNLTLI 208
G G+ W +K R EL K P ++ + + ++N +L+
Sbjct: 150 GGGDGWPLKAPKDAKKLR--ELGASNAPVEARQFGGKGLPPSFVQPFRCRRVSLANFSLV 207
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
N+P W VHPVYS +V V+ + + PNTDG++P++C + +E+C I +GDD VA+K+
Sbjct: 208 NAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVISAGDDAVALKT 267
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G D G G+ ++ +++RR S F+ I +GSE+SGG+ +V + + + +
Sbjct: 268 GRDADGWRVGVASENIVVRRNVLASRFNG-ICVGSEVSGGVDNVFFLENRIERAFHAIFV 326
Query: 329 KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD--PHALP-VIQNINYRDM 385
K+ RG FV+ V+V + A+ + G H N+Y A P + ++D+
Sbjct: 327 KSNSERGSFVRYVHVAHVK------AYDLAGDC-IHFTNDYKGVRGARPTTFEKFAFKDV 379
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIELTNK 419
+ + A R +A P + I +V ++ T +
Sbjct: 380 ICRSAVFAIRATSLAASPIADVTIRDVIVKSTMR 413
>gi|224536297|ref|ZP_03676836.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522091|gb|EEF91196.1| hypothetical protein BACCELL_01169 [Bacteroides cellulosilyticus
DSM 14838]
Length = 473
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 50/410 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ ++G GD + NT A + AID + GG + PG +LTGS + ++ L +
Sbjct: 48 NVTDYGAKGDALSMNTMAIQKAIDAA---EQAGGGIVVFHPGIYLTGSLFVGNNVNLHIS 104
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K L+ SQD ++ I+ R E S+LI + I+GD G I+G+G+
Sbjct: 105 KGVTLIGSQDIGDYKKIDT-----RVAGIEMEWPSALINIIGKKNAAISGD-GVINGRGK 158
Query: 174 LWWRKF-------RAGELKYT------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ A L++ RP I I +N+ + ++ L W++H +YS
Sbjct: 159 VFWDKYWNMREDYEAKGLRWIVDYDCERPRGILIAECENVTVRDIVLYQPGFWSLHILYS 218
Query: 221 SSVIVQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ + GI I + P+TDGI+ DS +++ I DD +K+G D G+
Sbjct: 219 KHITIDGIIISNNIEGHGPSTDGIDIDSSEYILVQNANINCNDDNFCLKAGRDSDGLRVN 278
Query: 279 MPTKQLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337
P + ++IR C++ + GSE SGGI+++ A + + ++ G+R K+ RGG
Sbjct: 279 RPCQYVVIR--DCVAGSGGGMFTCGSETSGGIRNIVAYRMKGVGTKCGLRFKSTCQRGGV 336
Query: 338 VKDVYVRRMTMKTMKWAF-----WITGSYGSHPDNNYDPHAL-----------------P 375
++D+Y+ + M ++ F W S YD + P
Sbjct: 337 IEDIYLYDIEMIGVERPFVVDLNWNPAYSISKLPKGYDMEKIPVYWSKMLESVSLEQGTP 396
Query: 376 VIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
V +N+ ++ A N + GIA + NV IE NK K+ W
Sbjct: 397 VFRNVTLDNVTASNARTCMNVVGIANSKIENFILRNVCIE-GNKAGKIIW 445
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 169/378 (44%), Gaps = 53/378 (14%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+ VGDG T NT + AID ++ +++P G +LTG+ L S L+L + AV
Sbjct: 96 YHAVGDGKTLNTAVIQRAIDDCMDEEA-----VYLPKGVFLTGALRLHSDMELYLEEGAV 150
Query: 118 LLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLI-FGT-------NLTDVVITGDNGTI 168
L + +++ LP + R E YSS++ G+ N +VVI G GTI
Sbjct: 151 LQGTDQVEDY-----LPRIWSRFEGIEQECYSSVLNLGSLEHQGDYNCRNVVIRG-KGTI 204
Query: 169 DGQGELWWRKFRAGELKY------------------------TRPYLIEIMYSQNIQISN 204
G K A E ++ RP LI + QNI +S
Sbjct: 205 ASGGRSLAEKVIASETEHLKDYLLSLGEQIRECEKPETIPGRVRPRLINMSNCQNITMSG 264
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
L L + SWNVH +YS ++ T + N DG +PDS TN I C +GDD +
Sbjct: 265 LKLKDGASWNVHMIYSDGIVTNNCTFYSEGIW-NGDGWDPDSSTNCTIFGCTFNTGDDSI 323
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
A+KSG + G P++ IR C I +GSEMSGGI DV+ D S
Sbjct: 324 AIKSGKNPEGNEISRPSEH--IRIFDCKCAMGRGITIGSEMSGGINDVQIWDCDISSSRH 381
Query: 325 GVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRD 384
G+ IK RGG+VK+V VR +T + F G + D+ PV + + +
Sbjct: 382 GIEIKGTKKRGGYVKNVKVR--DSRTARILFHSVG----YNDDGAGAPKPPVFEKCIFEN 435
Query: 385 MVAENVTMAARLEGIAGD 402
+ ++++ + E I D
Sbjct: 436 IDVTGMSLSKQREWIPCD 453
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 65/380 (17%)
Query: 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG 144
+ G +L + G+ LTG NL S+ T+ DAV+ + + + P + R E
Sbjct: 28 DSGGELIIAQGEHLTGPINLVSNLTVTFETDAVIKFKNNPELY-----TPVWTRWEGIEC 82
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE--------------------- 183
L++ ++VI G G +DG G WW KFR E
Sbjct: 83 YAMHPLMYANGKENIVIRG-KGVVDGSGSSWWDKFRNIEQEDRTLPREKYELDLAKLNPD 141
Query: 184 ------------LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
++ RP LI+ +I++S+ TL NSP W +H VYS+ + + +T
Sbjct: 142 YKTRTGGGGRPSTQFLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKISIDNMTFS 201
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
P + NTD ++ DS + +++C + GDD V +KSG + GI PTK + +
Sbjct: 202 NPAEAINTDAMDIDSSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCRI 261
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
++ IA+GSE + GI DV + T + G+R+K+ RGG ++++ + + M +
Sbjct: 262 LASHGG-IAIGSETAAGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMD-L 319
Query: 352 KWAFWITGSY----------------GSHPDNNYDPHALPVIQNINYRDMVAENVTMAAR 395
W Y G P + PH I+NI+ +++ A NV A
Sbjct: 320 CWCPISLEQYFAPGVLPEEEATVLDEGPQPVDETTPH----IRNISIKNIKATNVRATAA 375
Query: 396 LEGIAGDPFTGICISNVTIE 415
I G P I NV IE
Sbjct: 376 F--IVGLPEAN--IENVEIE 391
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 40/334 (11%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLH 113
+ +FG VGD + + AF I + + G+++ VPPG +L G ++ + ++ +
Sbjct: 54 ITDFGAVGDSLSDSKPAFDKVIQIC---KEQNGARIIVPPGVYLLRGPIHMVDNMSIDIQ 110
Query: 114 KDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K A L+ S + K++ P + L S+ T YS I+ + +V I G+ GTIDG
Sbjct: 111 KGAKLIFSNEAKDYLPTV--LTSW---EGTFLYNYSPFIYAYQVKNVAIIGE-GTIDGNA 164
Query: 173 E----LWW--------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208
+ LW K + GE + RP I+ +NI I +T+
Sbjct: 165 KDSFNLWHGKQKQSQELSRKMNHENVPIEKRQFGEGHFLRPQFIQFFECKNILIEGVTIT 224
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP W VH + S ++ + + A + N DG +P+ N IED + DD +A+K+
Sbjct: 225 NSPFWCVHFLKSENITARKVKFDA--FNKNNDGFDPEYSKNVLIEDIDFNNADDNIAIKA 282
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIT-AIDSESGVR 327
G D G G+ ++ +IIR C + +GSEMS G+Q+V E+ T + G+
Sbjct: 283 GRDYEGRRIGLTSENIIIR--NCRFKGLHGVVIGSEMSAGVQNVFVENCTYGGYCKRGIY 340
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSY 361
+K+ RGGF++D+Y+ + ++ F++T Y
Sbjct: 341 LKSNPDRGGFIRDIYINNVVFGEVEDCFFVTSYY 374
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 164/379 (43%), Gaps = 41/379 (10%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPVIEPLPSYG 137
+ + S+GG + +P GKW++G L S L + +DA ++ E P + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWISGRIELKSFVELHIARDAEIVFGGCAEDYLPAV-----FT 103
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTI--DGQGELWWRKFRAGELK---------- 185
R E + I+ N ++ ITG+ + D E+ R A ++
Sbjct: 104 RHEGVEIMGPGAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
+ RP I + +N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-T 222
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
P+ DGI+ +SC N IE C + GDDC +K+G G+ G T+ ++IR +
Sbjct: 223 EVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH-SLAQH 281
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----KT 350
I +GSE +G I+++ D + +G+R KT RGG R+ M K
Sbjct: 282 GHGGITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 351 MKW-----AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W A+++ +P+ D H P I N +D + E+ GI PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFS 400
Query: 406 GICISNVTIELTNKPKKLQ 424
I N TI LQ
Sbjct: 401 NTLIENGTIHCQQLISALQ 419
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 53/367 (14%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRD-TEG 144
GG + +P G+WLTG +L S+ L L K A LL S + +++ LP+ + E
Sbjct: 93 GGGIVVIPKGEWLTGKIHLKSNVNLHLEKGATLLFSGNPQDY-----LPAVVSSWEGMEC 147
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG---ELWWRKFRA-------------------- 181
YS LI+ +V ITG+ GT+ Q E W+ + RA
Sbjct: 148 YNYSPLIYVYECKNVAITGE-GTLKAQMATWEKWFARPRAHMESIKRLYNLAWNRAPLEQ 206
Query: 182 ----GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ + RP I+ S+NI + ++++NSP W +H S ++ ++ + + A
Sbjct: 207 RQMVNDTAHLRPQFIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYA--HGH 264
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N DG++P+ N IE+C GDD +A+KSG + G P+K ++IR T +
Sbjct: 265 NNDGVDPEMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCT-VKNGHQ 323
Query: 298 VIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
++A+GSE+SGGI++V + T +D + IKT GG+VK++Y + +
Sbjct: 324 LVAIGSELSGGIENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNIYASNIRSGKID-- 381
Query: 355 FWITGSYGSHPDNNYD--------PHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTG 406
G G D Y L I++I ++ A V AR+ G P
Sbjct: 382 ---LGILGIETDVLYQWRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVET 438
Query: 407 ICISNVT 413
+ + NVT
Sbjct: 439 VSLKNVT 445
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 38 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 92
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + D++I G G IDGQGE WW + R G + R
Sbjct: 93 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKR 151
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 152 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 210
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 211 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 268
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 328
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 329 NSNDLERMP 337
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 14 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 68
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + D++I G G IDGQGE WW + R G + R
Sbjct: 69 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKR 127
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 128 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 186
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 187 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 244
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 245 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 304
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 305 NSNDLERMP 313
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 14 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 68
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + D++I G G IDGQGE WW + R G + R
Sbjct: 69 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKR 127
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 128 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 186
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 187 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 244
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 245 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 304
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 305 NSNDLERMP 313
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERVIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA 354
+ + + A
Sbjct: 369 NIEVGECREA 378
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 38 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 92
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + D++I G G IDGQGE WW + R G + R
Sbjct: 93 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGEDQKSGTRAEYDRKGLRWIADYAIKR 151
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 152 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 210
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 211 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 268
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 328
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 329 NSNDLERMP 337
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 38 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 92
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTR 188
++++ + D++I G G IDGQGE WW + + K R
Sbjct: 93 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKVLRWIADYAIKR 151
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 152 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 210
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 211 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 268
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 328
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 329 NSNDLERMP 337
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAKTFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERVIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA 354
+ + + A
Sbjct: 369 NIEVGECREA 378
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 38 SPVFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 92
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + D++I G G IDGQGE WW + R G + R
Sbjct: 93 AAILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKR 151
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 152 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 210
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 211 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 268
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 328
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 329 NSNDLERMP 337
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 53/366 (14%)
Query: 84 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE 143
+GG ++ +P G++LT L S+ L L VL + D + +++ R +
Sbjct: 76 EQGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQT-----RIEGID 130
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WW-------------RKFRAGELKYT- 187
S LI+ T++ ITG NG +DGQ + W+ +K L Y
Sbjct: 131 CYNISPLIYAYGETNIAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEM 189
Query: 188 ------------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
RP I + +NI + TL SP W +HP+ S ++ V+ +
Sbjct: 190 KEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVK 249
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
+ + N DG +P+SC N IEDC +GDDC+A+KSG D+ G + +P++ +I+R
Sbjct: 250 MQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHC 307
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG--VRIKTAVGRGGFVKDVYVRRMT 347
+ A +A+GSE++GG ++V E+ T E +RIK+ RGG V+++++R +
Sbjct: 308 R-MKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIR 366
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI-----AGD 402
+ K + H D D LP NI+ ++ ++ L+G A D
Sbjct: 367 VGECKESILGFELKYWHVD---DGPYLPYFHNIHLENITSKKSQYVLHLDGFEDKIQAQD 423
Query: 403 PFTGIC 408
F C
Sbjct: 424 IFVKDC 429
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 181/399 (45%), Gaps = 69/399 (17%)
Query: 94 PGKWLTGSFNLTSHFTLFLHKDAVL--LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLI 151
P + TG+ + S+ L + ++A+L + ++ + +P++ Y R E +S I
Sbjct: 115 PNVYYTGAIYIKSNIELHIEENAILKFVRNKTNEFYPLV-----YTRWEGIEMMNFSPFI 169
Query: 152 FGTNLTDVVITGDNGTIDG-QGELWW------------------RKFRAGE--------- 183
+ ++ ITG G +DG E W R F G+
Sbjct: 170 YSYEENNIAITG-KGILDGCADEFNWMPWKFGYFNEEDQQIQRERLFNMGQEGVDVRNER 228
Query: 184 -----LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPN 238
+ RP I+ + NI I ++T++NSP W V+PV ++ V GI I + N
Sbjct: 229 IFSDDISTIRPPFIQPYKTNNILIRDITILNSPFWEVNPVLCENIKVSGIRIDTNLY--N 286
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298
DG++P+SC + IE+CY ++GDDC+A+KSG + G G+PT +IIR
Sbjct: 287 NDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRN-NEFKDGHGG 345
Query: 299 IALGSEMSGGIQDVRAEDITAIDSES---GVRIKTAVGRGGFVKDVYVRRMTMKTMKWA- 354
I +GSE+SGG+ ++ D DSE +R KT RGG ++++Y++ T+ K A
Sbjct: 346 ITIGSEISGGVNNIFGHD-NYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV 404
Query: 355 -----FWITGSYGSHPDNNYDPHALPVIQNINYRDMV-----AENVTMAARLEGIAGDPF 404
F+ G+ G+H P+++NI ++ + + A L+G P
Sbjct: 405 IHADFFYEEGTNGNHK---------PILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPI 455
Query: 405 TGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCE 443
I I + + LQ N ++T + + K E
Sbjct: 456 ENILIEDALLNGVKGEAVLQ-NIKNLTFRNVSINGKKLE 493
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 150/309 (48%), Gaps = 38/309 (12%)
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PV 129
+A ID S GG + + G + L G +L S L L + A L S ++ PV
Sbjct: 63 LQAVIDSCS---VAGGGTVKISEGHYFLNGPLHLKSDVNLNLAEGAYLQFSGKSSDFLPV 119
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL---WWRKFRA----- 181
+ R TE +S +I+ + ++ ITG GTID QG L W K A
Sbjct: 120 V-----LTRWEGTELYGHSPMIYAYHANNIAITG-KGTIDAQGGLEFAAWSKIEANDRDR 173
Query: 182 ----------------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
GE RP I+ + I +T+ +SP W +HPVY +VIV
Sbjct: 174 LREMGDKLVPVHERIFGEGTVLRPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIV 233
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+G+TI + PN DG +P+S TN IE+C +GDD +A+KSG D G G P++ ++
Sbjct: 234 RGVTIDSHF--PNNDGCDPESTTNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIV 291
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
IR S + + +GSEMSGG DV +I ++ + K+ RGG++++V V
Sbjct: 292 IRNCIFHSECNG-LCIGSEMSGGASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDS 350
Query: 346 MTMKTMKWA 354
+T++ K A
Sbjct: 351 ITVERAKGA 359
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 186/401 (46%), Gaps = 60/401 (14%)
Query: 61 VGDGTTSNTKAFK---AAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDA 116
V D N AF A ++ +++ GG + +P G + + G+ L S+ L + + A
Sbjct: 51 VTDYGAKNDTAFDSRPAILEAINKCNQNGGGTVLIPAGNYFIKGAITLKSNVNLHIVEGA 110
Query: 117 VLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
L S ++ P++ + TE Y+ I+ T+V +TG GT+DG G +
Sbjct: 111 RLEFSTAASDYLPMV-----LTKWEGTECFNYTPFIYAYQCTNVALTGK-GTLDGNGAVT 164
Query: 176 WRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTLINSP 211
+ + A GE Y RP +I+ +N+ + ++ + +SP
Sbjct: 165 FNGWHAKQGPAVDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVRIFDSP 224
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
W +HPV+ ++V V+ I I + + N DG +P+SCTN IE+ GDD +A+KSG D
Sbjct: 225 FWIIHPVFCNNVTVRNIYIDS--NNYNNDGCDPESCTNVLIENMDFNVGDDGIAIKSGRD 282
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330
Q G G T+ +IIR F+ I +GSE SGG+++V ED +G+ K+
Sbjct: 283 QDGWRIGQATENVIIRN----CHFARWAITIGSETSGGVRNVYIEDCKIDSCRNGIYFKS 338
Query: 331 AVGRGGFVKDVYVRRMTMKTMKWAF--WITGSY----GSHPDNNYDPHALPVIQNINYRD 384
+ RGG+ +++ +RR+ W + T + G+HP + +NI D
Sbjct: 339 NLDRGGYFENLNMRRIEADVCLWGVVNFRTNYHGYRGGNHP---------TLFRNICIED 389
Query: 385 MVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
+ V ++A G+ I + N+ ++ PK +Q
Sbjct: 390 INCNRVDSVALMANGLPEAKLYNITLRNIKVK--KAPKAIQ 428
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIAITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRNKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERIIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA 354
+ + + A
Sbjct: 369 NIEVGECREA 378
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 53/366 (14%)
Query: 84 SEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTE 143
+GG ++ +P G++LT L S+ L L VL + D + +++ R +
Sbjct: 76 EQGGGKVIIPDGEFLTAPIRLKSNVNLHLSDSTVLKFTTDPFFFDLVQT-----RIEGID 130
Query: 144 GGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WW-------------RKFRAGELKYT- 187
S LI+ T++ ITG NG +DGQ + W+ +K L Y
Sbjct: 131 CYNISPLIYAYGETNIAITG-NGVMDGQADSSNWFSENRIRGIVQEDGKKINEKTLLYEM 189
Query: 188 ------------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
RP I + +NI + TL SP W +HP+ S ++ V+ +
Sbjct: 190 KEDSIPFKERVFMRENGIRPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVK 249
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
+ + N DG +P+SC N IEDC +GDDC+A+KSG D+ G + +P++ +I+R
Sbjct: 250 MQS--HGYNNDGCDPESCRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHC 307
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG--VRIKTAVGRGGFVKDVYVRRMT 347
+ A +A+GSE++GG ++V E+ T E +RIK+ RGG V+++++R +
Sbjct: 308 R-MKDGHAGVAIGSEVTGGCRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIR 366
Query: 348 MKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI-----AGD 402
+ K + H D D LP NI+ ++ ++ L+G A D
Sbjct: 367 VGECKESILGFELKYWHVD---DGPYLPYFHNIHLENITSKKSQYVLHLDGFEDKIQARD 423
Query: 403 PFTGIC 408
F C
Sbjct: 424 IFVKDC 429
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 36/329 (10%)
Query: 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFT 109
A + + +FG GDG+T +T A + AID ++ G+ +F P G +L+GS + S T
Sbjct: 24 AGTVKVNDFGAKGDGSTMDTAAIQKAIDAAAKSH---GTVVFAP-GTYLSGSIFVKSGVT 79
Query: 110 LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTID 169
L L K +L SQ +++PV +P+ R E ++L+ D VITG+ GTID
Sbjct: 80 LQLDKGVTILGSQRIEDYPV---MPT--RVAGIEMSWPAALVNVYEQKDAVITGE-GTID 133
Query: 170 GQGELWW------------RKFR-AGELKYTRPYLIEIMYSQNIQISN-LTLINSPSWNV 215
G G+++W R R A + RP L+++ S +I+I L L S W +
Sbjct: 134 GDGKIYWDSYWTLRKGYEPRGLRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTL 193
Query: 216 HPVYSSSVIVQGITIL--APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
H YS+ V G+TI P+TDGI+ DS + + I DD + +K+G D
Sbjct: 194 HICYSTDVTADGLTIRNNEGGRGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSD 253
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAV 332
G+ PT+ +++R T I +A + GSE SGG +++ A ++ G+ K+A
Sbjct: 254 GLRVNRPTEDVVLRDST-IRDGAAGVTFGSETSGGFRNIEAYNLKVFGHVPVGILFKSAH 312
Query: 333 GRGGFVKDVYVRRMTMK--------TMKW 353
RGGF ++V + +T+ TM W
Sbjct: 313 TRGGFAENVRIHDLTLTDIPVVLKVTMNW 341
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 30/307 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL + + +P I+ R E ++
Sbjct: 47 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGIEMKWPAA 101
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTRPY 190
++ + D++I G G IDGQGE WW + R G + RP
Sbjct: 102 ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 160
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ I +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS T+
Sbjct: 161 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDV 219
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S GI
Sbjct: 220 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAGIS 277
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N+
Sbjct: 278 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 337
Query: 369 YDPHALP 375
D +P
Sbjct: 338 NDLERMP 344
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 178/396 (44%), Gaps = 57/396 (14%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+E+FG V D S+ A +A D ++ + GG ++ G + T + +L S+ L + +
Sbjct: 60 VEDFGAVAD---SDEDATRAIADAIAAAHAAGGGRVVCAKGVYQTAAIHLKSNVELHVAE 116
Query: 115 DAVLLASQDEKEWPVIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG- 172
A L D + LP+ + R E YS LI+ ++ +TG G +DG
Sbjct: 117 GATLSFVTDPSRY-----LPAVFTRWEGMEMMGYSPLIYAYGQQNIAVTG-GGVLDGNAN 170
Query: 173 -ELWW------------------------------------RKFRAGELKYTRPYLIEIM 195
+ WW R+ E + RP ++
Sbjct: 171 DQTWWPWKGAHKERHWDLIEGEDQRPARDALQADVLAGVDPRERHYAEGSFLRPAFVQFY 230
Query: 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDC 255
++I +TL+NSP W +HPV SV+V+G+T + PN DG +P+SC N IE C
Sbjct: 231 ACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRS--HGPNNDGCDPESCKNVLIEQC 288
Query: 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAE 315
+GDDC+A+KSG ++ G G+ + +++R ++ LGSE+SGG +++ E
Sbjct: 289 VFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLV-LGSEISGGARNIFME 347
Query: 316 --DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373
+ + E +R KT RGG ++ V VR + ++ + A + Y +
Sbjct: 348 HCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHYEEGEAGEH---- 403
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICI 409
+P +++I D+ + V L G A +P I +
Sbjct: 404 MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITL 439
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 150/307 (48%), Gaps = 30/307 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL + + +P I+ R E ++
Sbjct: 16 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGIEMKWPAA 70
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQGE WW + + K RP
Sbjct: 71 ILNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 129
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ I +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS T+
Sbjct: 130 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDV 188
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S GI
Sbjct: 189 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAGIS 246
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N+
Sbjct: 247 DVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 306
Query: 369 YDPHALP 375
D +P
Sbjct: 307 NDLERMP 313
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 60/354 (16%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
R + S+ G DG T N+K AAI ++ GG + +P G WLTG + S+
Sbjct: 265 RRDTLSIVALGAKADGVTLNSKIINAAI---TKASENGGGVVMIPAGLWLTGPIVMKSNV 321
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L+L +A+L + D ++P++E +Y + R + I N ++ ITG
Sbjct: 322 NLYLAPNALLQFTTDFDQYPLVET--TY---EGLKAMRCQAPISAVNAENIAITGKGIID 376
Query: 169 -----------DGQGELWWRKFRA-----GELKYT------------------------- 187
D E W+K A GE K T
Sbjct: 377 GGGDAWRIVKKDKLTESQWKKLLASGGIEGEDKKTWYPSAKSQKGSHTKLAGVIESGKTA 436
Query: 188 ----------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
RP ++ I + + + +T NSP+W +HP+ + + ++ + P +
Sbjct: 437 ADYNDIKDFLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQ 496
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N DGI+ +SC RIE C GDD + +KSG D+ G G+ T+ +I+ T
Sbjct: 497 NGDGIDLESCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTVYHAHGG 556
Query: 298 VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
+ +GSEMSGG +++ + + + ++ G+R KT GRGG V+ +YV + MK +
Sbjct: 557 FV-VGSEMSGGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDI 609
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 33/406 (8%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
F S I C + ++ EF G +TK AAI S+ G + P G + TG
Sbjct: 13 FSLSYIQCNSEIYNVIEFRVDPTGHIVSTKGITAAIREASK---NNGGVVHFPKGIYRTG 69
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIE-PLPSYGRGRDTEGGRYSSLIFGTNLTDV 159
L SH TL + A+LL ++ +P + LPS + Y+ LI ++
Sbjct: 70 PIQLRSHVTLQIDNGALLLFEDNQNLYPPVNVTLPS----GEVIALSYTPLISAFGQRNI 125
Query: 160 VITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVY 219
ITG G +DG G W + TRP+ + + SQ + + + + NSP +NVH
Sbjct: 126 SITG-RGMLDGSGAFWIKLLPPPS---TRPFFLYFVESQEVLLEGVHIKNSPMYNVHFKD 181
Query: 220 SSSVIVQGITILAPVTS----PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGI 275
+S + ++GITI P + PNTDGIN D C + + I +GDD + +K+
Sbjct: 182 TSHITIKGITITNPENTVDPGPNTDGINCDPCRYLHVSNVTISTGDDAIVMKADMRGRTS 241
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
PT+ ++I + I A I++GS +GG++++ + + G+ IKTA RG
Sbjct: 242 KQLKPTEHVLIEN-SFIFVGHAGISMGSATAGGLRNITVRNCLFNGTNRGIYIKTARDRG 300
Query: 336 GFVKDVYVRRMTMKTM-KWAFWITGSY-----GSHPDNNYDPHAL----PVIQNINYRDM 385
G V+D++ +TM + K I Y G H N Y P + P I NI ++ +
Sbjct: 301 GKVEDIHYHNITMLNIRKEGVAIADVYNGTDEGLHERNVY-PQPVTENTPFIGNIEFQGI 359
Query: 386 VAENVTMAARLEGIAGDPFTGICISNVTIE-----LTNKPKKLQWN 426
+ + + G+ P I + + + N+ K++ N
Sbjct: 360 RGNSKLESIFIVGLPESPVVNITFKDFSAKSDLPIFLNQTKRIVIN 405
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 54/355 (15%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERVIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA-FWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398
+ + + A I Y + D + PV+++I ++ +E + G
Sbjct: 369 NVEVGECREAVLKINLQYENREK--CDRNFPPVVRHIYLDNVTSEKSKYGVLITG 421
>gi|255691082|ref|ZP_05414757.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623432|gb|EEX46303.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 487
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 27/306 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + + +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 341 VYVRRM 346
+Y+ R+
Sbjct: 346 IYMTRV 351
>gi|160886983|ref|ZP_02067986.1| hypothetical protein BACOVA_04997 [Bacteroides ovatus ATCC 8483]
gi|423288919|ref|ZP_17267770.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
gi|156107394|gb|EDO09139.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392669009|gb|EIY62501.1| hypothetical protein HMPREF1069_02813 [Bacteroides ovatus
CL02T12C04]
Length = 487
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 27/306 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + + +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 341 VYVRRM 346
+Y+ R+
Sbjct: 346 IYMTRV 351
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 189/413 (45%), Gaps = 59/413 (14%)
Query: 39 DWFEYSAISCRAHSASLEEF------GGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFV 92
D+ + SA A+S ++F G GDG T NT A + A+D + + +
Sbjct: 11 DFLQLSA-GAFAYSGLAQKFVDPRDTGARGDGHTLNTNALQKAVDQAAAAGG---GVVVI 66
Query: 93 PPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIF 152
PPG +L+G L SH TL L A+L S +++ P G D+ G L+F
Sbjct: 67 PPGDFLSGGLVLRSHVTLHLEAGAILRGSPRVEDYEYRPGPPVEG---DSNG---HHLLF 120
Query: 153 GTNLTDVVITGDNGTIDGQGELWW-RKFRA--------GEL--------KYTRPY-LIEI 194
+ D+ ITG +GTIDG G +W RK R+ G++ RP +IE+
Sbjct: 121 ALDAEDIAITG-HGTIDGGGSAFWHRKGRSTPRPEDLWGDVIAWDYEPATPRRPSPMIEL 179
Query: 195 MYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254
+N++I +TL N+P W + PV +V+++GI + P+ +PNTDG++ +C N + D
Sbjct: 180 ARCRNVRIEGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRNVFVSD 239
Query: 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL---TCISPFSAVIALGSEMSGGIQD 311
C I +GDD + +KS + YG +PTK + + TC + F +G+ G +++
Sbjct: 240 CDIATGDDAICIKS-ENPYGEL--LPTKNITVTNCVLSTCCNGFK----VGTSTHGRVEN 292
Query: 312 -------VRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
+ E T ++ + I V GG + V + + M+ + ++
Sbjct: 293 IVFSNSVIYNESTTPLNERATSGIALEVVDGGSMSGVLISNIQMENARTPLFVR------ 346
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELT 417
P ++ I + + A + + + G+ P + I+N + ++
Sbjct: 347 -LGRRKPAQGSFLRGIRFEQIHATGALLTSSITGLPDMPVEDVVIANSSFRMS 398
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RI +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|423294934|ref|ZP_17273061.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
gi|392674514|gb|EIY67960.1| hypothetical protein HMPREF1070_01726 [Bacteroides ovatus
CL03T12C18]
Length = 487
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 27/306 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + + +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 341 VYVRRM 346
+Y+ R+
Sbjct: 346 IYMTRV 351
>gi|298482124|ref|ZP_07000312.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271681|gb|EFI13254.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 487
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 161/306 (52%), Gaps = 27/306 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + + +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGTTLRLKSSMNRGGTVEN 345
Query: 341 VYVRRM 346
+Y+ R+
Sbjct: 346 IYMTRV 351
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERVIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA 354
+ + + A
Sbjct: 369 NVEVGECREA 378
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 151/307 (49%), Gaps = 30/307 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL + + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGIEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTRPY 190
++ + D++I G G IDGQGE WW + R G + RP
Sbjct: 95 VLNVLSAKDILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ I +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS T+
Sbjct: 154 ACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G+
Sbjct: 213 RIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N+
Sbjct: 271 DVYIHDINFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRKNS 330
Query: 369 YDPHALP 375
D +P
Sbjct: 331 NDLERMP 337
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|293369336|ref|ZP_06615921.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148480|ref|ZP_07041542.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|336404082|ref|ZP_08584781.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
gi|292635503|gb|EFF54010.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|295086728|emb|CBK68251.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|298513241|gb|EFI37128.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|335943733|gb|EGN05568.1| hypothetical protein HMPREF0127_02094 [Bacteroides sp. 1_1_30]
Length = 487
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 159/303 (52%), Gaps = 27/303 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + S +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVEN 345
Query: 341 VYV 343
+YV
Sbjct: 346 IYV 348
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 51/310 (16%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEG 144
GG + VPPG++LTG L S+ L L + A L S ++ + P + R +
Sbjct: 79 GGGTVLVPPGEFLTGPITLKSNVNLHLEEGAYLKFSSEKYLYTPTV-----LTRWEGVDC 133
Query: 145 GRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKF------------------RAGEL 184
LI+ +++ ITG G IDGQ + WW R L
Sbjct: 134 YNLHPLIYAYGESNIGITGK-GIIDGQASNDNWWSMCGAPHYGWKEGMTAQKNGGRDKLL 192
Query: 185 KYT-----------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQG 227
Y RP LI + I I N+TL NSP W +HP++ S+ V+G
Sbjct: 193 MYAETFAPIDKRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRG 252
Query: 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287
+ + + PN+DG +P+S N IE+C +GDDC+A+KSG + G + +P++ +I+R
Sbjct: 253 VKVSS--HGPNSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVR 310
Query: 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS---ESGVRIKTAVGRGGFVKDVYVR 344
V+ +GSE+SGG +++ E+ +DS E +RIKT RGG ++++YVR
Sbjct: 311 NCEMKDGHGGVV-VGSEISGGYKNLFVEN-CKMDSPNLERVIRIKTNNCRGGVIENIYVR 368
Query: 345 RMTMKTMKWA 354
+ + + A
Sbjct: 369 NVEVGECREA 378
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGAEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 47 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 101
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 102 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 160
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 161 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 219
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 220 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 277
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 278 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 336
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 152/355 (42%), Gaps = 41/355 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
++ + G GD +T +AAI ++ +P G + S L S+ + L
Sbjct: 82 NVRDCGAKGDAEHDDTTNIQAAI-----MACPKDGRVLIPAGSYRIKSLFLKSNINIELV 136
Query: 114 KDAVLLASQDEKEWPVI---------------EPLPSYGRGRDTEGGRYSSLIFGTNLTD 158
AVLLA D I + LP GR Y S G + D
Sbjct: 137 DGAVLLARHDRAALAYIPGTVTGNEGAGYAGTDMLP-LGRWEGESFSTYCSTFTGLGVHD 195
Query: 159 VVITGDNGTIDGQGEL----WWRK-----FRAGE-LKYTRPYLIEIMYSQNIQISNLTLI 208
V I G G IDGQ + WW K FR E + RP +I + QN+ ++ T+
Sbjct: 196 VCIYG-RGAIDGQTDFAEDNWWNKDFKNIFRPEEGREVARPRMIFLSECQNVSLAGFTVR 254
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
NSP+WN+HPV V ++I P S NTDG +P+SC RI C GDDC+A+KS
Sbjct: 255 NSPAWNIHPVLCEHVDALCLSIEGPKNSHNTDGFDPESCGFVRILGCQFSVGDDCIAIKS 314
Query: 269 GWDQYGIAYGM-PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVR 327
G + GI + P ++ + + LGSE +GGI+D+ ++ G+R
Sbjct: 315 G--KLGIEPELRPATHDVLISHCYMHDGHGAVVLGSEAAGGIKDLTVSKCLFERTDRGLR 372
Query: 328 IKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYD----PHALPV 376
+KT GRG + + + M + F + Y D D ALPV
Sbjct: 373 VKTRRGRGKDAVNEGITFEHIRMDEVLTPFVVNSFYFCDKDGKTDYVQSREALPV 427
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 30 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 84
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 85 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 143
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 144 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 202
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 203 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 260
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 261 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 319
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 163/379 (43%), Gaps = 41/379 (10%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPVIEPLPSYG 137
+ + S+GG + +P GKWL+G L S L + + A ++ E P + +
Sbjct: 49 IEQLSSQGGGTVIIPAGKWLSGRIELKSFVELHIARGAEIVFGGCAEDYLPAV-----FT 103
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTI--DGQGELWWRKFRAGELK---------- 185
R E + I+ N ++ ITG+ + D E+ R A ++
Sbjct: 104 RHEGVEIMGPGAFIYANNQENIAITGEGRILGPDMDAEIRKRPNGASVVEKDIPWDMPVE 163
Query: 186 -----------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV 234
+ RP I + +N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 164 QRIYDGMDGRTFYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-T 222
Query: 235 TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294
P+ DGI+ +SC N IE C + GDDC +K+G G+ G T+ ++IR +
Sbjct: 223 EVPSGDGIDIESCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH-SLAQH 281
Query: 295 FSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----KT 350
I +GSE +G I+++ D + +G+R KT RGG R+ M K
Sbjct: 282 GHGGITIGSETAGMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKA 341
Query: 351 MKW-----AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W A+++ +P+ D H P I N +D + E+ GI PF+
Sbjct: 342 FTWDLLGNAYYMGELAARYPERAVD-HLTPNISNTVIKDFIVESSKQFFTANGIPEIPFS 400
Query: 406 GICISNVTIELTNKPKKLQ 424
I N TI LQ
Sbjct: 401 NTLIENGTIHCQQLISALQ 419
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 146/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 270 WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329
WD+YGI+Y P+ ++IR L S SA I++GSEMSGG+ +V E++ DS VRIK
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAEN 389
TA GRGG+V+D+ R +T + ++ I Y HPD YD A P++Q I++ + +
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG-ISSGVTPKPCELL 445
V + R+ G P + ++++ LT K K + + C + G + + P PCE L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHI-FQCAFVQGRVIGSIFPAPCENL 176
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 175/377 (46%), Gaps = 39/377 (10%)
Query: 12 VICIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKA 71
++C+ L +++L N + A E + +S L +FG + + + KA
Sbjct: 6 LMCLFALFSAVLALGQNRSVADSAIAKITKEITLPKIPENSVELHQFGALPNDAKDDRKA 65
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVL-LASQDEKEWPV 129
A+++L + G +L + G + + G +L SH + L + AVL A + E PV
Sbjct: 66 IIKALNYLKK---RNGGKLIIGKGIYEINGPIHLPSHVNVHLQEGAVLRFAPKPELYLPV 122
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA-------- 181
+ + T YS LI+ N T++ ITG G IDG+G W F+A
Sbjct: 123 V-----FTSWEGTFLYNYSPLIYAKNETNIAITGA-GVIDGEGSKVWSTFKAEEQADKLL 176
Query: 182 ----------------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225
G+ RP+L++ + +NI I + +SP W H + SS + +
Sbjct: 177 SRKMNHEEQPIASRQFGKDSKLRPHLLQFIDCKNILIEGVHFEDSPFWTTHFLRSSEITI 236
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+GI+ A + N DGI+ + N IE+ + DD +A+K+G D G A Q I
Sbjct: 237 RGISFNA--HNKNNDGIDLEYVNNVLIENVDFNNSDDNIAIKAGRDTEGRANSETPSQNI 294
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAVGRGGFVKDVYVR 344
+ R A++ +GSEMS G+++V D A + GV KT RGG++K +Y+
Sbjct: 295 VIRNNRFKGLHALV-IGSEMSAGVKNVFVVDNMASGYLKRGVYFKTNSDRGGYIKSIYID 353
Query: 345 RMTMKTMKWAFWITGSY 361
++ ++ + ++T +Y
Sbjct: 354 QLELQKTEDCIYMTANY 370
>gi|237721252|ref|ZP_04551733.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449048|gb|EEO54839.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 487
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 27/303 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V PG + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAPGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI + P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNIGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + S +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVEN 345
Query: 341 VYV 343
+YV
Sbjct: 346 IYV 348
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 150/316 (47%), Gaps = 47/316 (14%)
Query: 62 GDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLAS 121
GDG T NT A + AID G +++P G +LTG+ L S L+L + AVL +
Sbjct: 126 GDGITKNTAALQRAIDACGP-----GDAVYLPAGTYLTGALQLHSDMELYLEEGAVLQGT 180
Query: 122 QDEKEWPVIEP-LPSYGRGRDTEGGRYSSLIF--------GTNLTDVVITGDNGTIDGQG 172
++ +P +PS R E YSSL+ G N +VVI G GTI G G
Sbjct: 181 AQLVDY---QPRIPS--RFEGIERRCYSSLLNLGKMDHDDGYNCVNVVIRG-KGTIAGGG 234
Query: 173 ELWWRKFRAGELKY------------------------TRPYLIEIMYSQNIQISNLTLI 208
+ A E ++ RP L+ + QN+ IS LTL
Sbjct: 235 KALADAIIADEREHLKDYLAEHLDLVESCDEEDTIPGRVRPRLVNLSNCQNVWISGLTLK 294
Query: 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
+SPSW + +YS +++ + N DG +PDS TN + + +GDD VA+KS
Sbjct: 295 DSPSWILQMIYSDNIVTDHCAFHSEGIW-NGDGWDPDSSTNCTLFASELYTGDDSVAIKS 353
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328
G + G A G P+ + I C + +GSEMSGG++DV+ D +S SG+ I
Sbjct: 354 GKNPEGNAIGRPSAHIYI--FDCRVGSGQGLCIGSEMSGGVEDVQIWDCDLENSFSGLEI 411
Query: 329 KTAVGRGGFVKDVYVR 344
K RGG+V+ V VR
Sbjct: 412 KATAKRGGYVRGVTVR 427
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 30/309 (9%)
Query: 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRY 147
S +F+P G +L G+ L L + AVL + + +P I+ R E
Sbjct: 38 SPVFIPEGIYLVGALFLKDKSHLIFEEGAVLKGKTEIEAFPEIDT-----RVAGVEMKWP 92
Query: 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------------RAG-----ELKYTR 188
++++ + ++I G G IDGQGE WW + R G + R
Sbjct: 93 AAILNVLSAKHILIEG-KGIIDGQGEHWWELYWGKDQKSGTRAEYDRKGLCWIADYAIKR 151
Query: 189 PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248
P + +++++ I +L S WN+ YS+ V+V+ I I+ P+TDGI+ DS T
Sbjct: 152 PRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSST 210
Query: 249 NTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG 308
+ RI +C + GDDC+A+KSG D G + ++ I R S + + +GSE+S G
Sbjct: 211 DVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGYG--VTIGSEVSAG 268
Query: 309 IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSH-PD 366
+ DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + +
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNMMDVQFPFSWIMDWHNEYNRK 328
Query: 367 NNYDPHALP 375
N+ D +P
Sbjct: 329 NSNDLERMP 337
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 25/314 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVVLQPGYYQTGALFVKSGVNLQIG 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K LLAS D +P R E +++I + + I+G+ GT+D +G+
Sbjct: 116 KGVTLLASPDIHHYPEFRS-----RIAGIEMTWPAAVINIVDEKNAAISGE-GTLDCRGK 169
Query: 174 LWWRKFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ +Y R I + S +I +S TL+ + W +YS
Sbjct: 170 VFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILYS 229
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G+
Sbjct: 230 DYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVN 289
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
PT+ +++R T + +I GSE SG I++V D+ A+ + + +R+K+A+ RGG +
Sbjct: 290 RPTENVVVRNCTA-RKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTI 348
Query: 339 KDVYVRRMTMKTMK 352
+++Y+ R++ + ++
Sbjct: 349 ENIYMTRVSAENVR 362
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 158/309 (51%), Gaps = 27/309 (8%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G DG T NT A + AID ++ G + PG +L+G+ L S+ L L +
Sbjct: 20 VTDYGAKADGKTVNTVALQKAIDAAAK---AGKGVVVFAPGVYLSGALFLKSNMELRLDE 76
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL 174
+ QD +P+++ R E ++L+ ++V ++G GT+DG G++
Sbjct: 77 GVEIRGVQDLAAYPLMQT-----RVAGIEMKWPAALLNVYEQSNVRLSG-KGTVDGDGKI 130
Query: 175 WWR---KFRAGE-----LKYT------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
WW K R E L++ RP LI+I SQ + + +LTL W VH YS
Sbjct: 131 WWDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVSLTLKRPGFWTVHICYS 190
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
V V G+TI P+TDGI+ DS ++ + C I DD + +K+G D G+
Sbjct: 191 ERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVN 250
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAVGRGGF 337
+PT+++ I + +A + +GSE SGGI+ + + +T + + +G+ K+A RGG
Sbjct: 251 LPTERVRITD-NVVRGGAAGVTIGSETSGGIRHIEVDHLTVMSAVPAGILFKSASTRGGT 309
Query: 338 VKDVYVRRM 346
++D+ +R +
Sbjct: 310 IEDIAIRNV 318
>gi|262408402|ref|ZP_06084949.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647547|ref|ZP_06725126.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807593|ref|ZP_06766388.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508616|ref|ZP_08788242.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353954|gb|EEZ03047.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292637115|gb|EFF55554.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294445208|gb|EFG13880.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455044|gb|EEO51505.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 511
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID S GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y + L I + S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEKKGLRWIVDYDCKRVRGILVERSSDITLKGFTLMRTGFWGCQVLY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G+
Sbjct: 234 SNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I+++ ++ A+ + + +R+K+A+ RGG
Sbjct: 294 NLPTENIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTDVKAENVR 367
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 25/314 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---ISGGGTVVLQPGYYQTGALFVKSGVNLQIG 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K LLAS D +P R E +++I + + I+G+ GT+D +G+
Sbjct: 116 KGVTLLASPDIHHYPEFR-----SRIAGIEMTWPAAVINIVDEKNAAISGE-GTLDCRGK 169
Query: 174 LWWRKFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ +Y R I + S +I +S TL+ + W +YS
Sbjct: 170 VFWDKYWEMRKEYEARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILYS 229
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G+
Sbjct: 230 DYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVN 289
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
PT+ +++R T + +I GSE SG I++V D+ A+ + + +R+K+A+ RGG +
Sbjct: 290 RPTENVVVRNCTA-RKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLKSAMNRGGTI 348
Query: 339 KDVYVRRMTMKTMK 352
+++Y+ R++ + ++
Sbjct: 349 ENIYMTRVSAENVR 362
>gi|336415463|ref|ZP_08595802.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
gi|335940342|gb|EGN02209.1| hypothetical protein HMPREF1017_02910 [Bacteroides ovatus
3_8_47FAA]
Length = 511
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + I+G+ GT+D +G
Sbjct: 121 KGVTLLAS------PSIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASISGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I I S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G+
Sbjct: 234 SDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I++V ++ AI + + +R+K+A+ RGG
Sbjct: 294 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTEVKAENVR 367
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 157/313 (50%), Gaps = 25/313 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L +
Sbjct: 59 SANSFGAVADSTVLSTEAIQKAIDSCA---VSGGGTVILQPGYYQTGALFVKSGVNLQIG 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K LLAS D +P R E +++I + + ++G+ GT+D +G+
Sbjct: 116 KGVTLLASPDIHHYPEFR-----SRIAGIEMTWPAAVINIVDEKNAAVSGE-GTLDCRGK 169
Query: 174 LWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ +Y L I + S +I +S TL+ + W +YS
Sbjct: 170 VFWDKYWEMRKEYVAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILYS 229
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
+ G+TI + P+TDGI+ DS N IE+C + DD + +KSG D G+
Sbjct: 230 DYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVN 289
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
PT+ +++R T + +I GSE SG I+++ D+ A+ + + +R+K+A+ RGG +
Sbjct: 290 RPTENVVVRNCTA-RKGAGLITCGSETSGSIRNILGYDLKAVGTSTVLRLKSAMNRGGTI 348
Query: 339 KDVYVRRMTMKTM 351
+++Y+ R++ + +
Sbjct: 349 ENIYMTRVSAENI 361
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 179/397 (45%), Gaps = 46/397 (11%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW- 127
TKA + AID +SR +GG ++ +P G W TG L S+ L L + A L S + ++
Sbjct: 78 TKAIQKAIDKVSR---DGGGKVVIPAGIWKTGRIELKSNVNLHLEEGAELHFSGNINDYL 134
Query: 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI--DGQGELWWR-------- 177
PV+ R E +L++ N ++ +TG + E+W R
Sbjct: 135 PVV-----LTRFEGVEVYSLGALVYANNQENIALTGHGKLVAPTTDCEIWKRQCYESIEK 189
Query: 178 --------KFRAGELKYTRPYLIEIMYS----QNIQISNLTLINSPSWNVHPVYSSSVIV 225
K R + K R + + S +N+ I +TL S WN+ PVY VI+
Sbjct: 190 YVEQYPDVKERIADGKKGRSVFLPLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVII 249
Query: 226 QGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLI 285
+G T+ + TDGI+ +S N IE C + GDDC +KSG + GI P++ ++
Sbjct: 250 RGATVDSH-GHGRTDGIDIESTRNVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIV 308
Query: 286 IRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
IR + ++ GSE + I+++ D ++SG+R KT RGG +++ R
Sbjct: 309 IRYCLAKRGWGGIVC-GSETAAMIRNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFER 367
Query: 346 MTMKTMKWAFW--ITGSYGSHPDNNYDPHALPV------IQNINYRDMVAENVTMAARLE 397
+ M AFW + G D A P+ +NI RD++ E+ + L
Sbjct: 368 IRMNLTGAAFWWDMLGEEKHVGDLAKRLPARPITPLTPSFKNITIRDIIVESASYFIDLN 427
Query: 398 GIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS 434
GI P I N+ + TNK ++ TD+ G +
Sbjct: 428 GIPETPAENNLIENL-VGKTNKLIRM----TDVKGFT 459
>gi|383114377|ref|ZP_09935141.1| parallel beta-helix [Bacteroides sp. D2]
gi|313693916|gb|EFS30751.1| parallel beta-helix [Bacteroides sp. D2]
Length = 511
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PYIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I I S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G+
Sbjct: 234 SDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I++V ++ AI + + +R+K+A+ RGG
Sbjct: 294 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTEVKAENVR 367
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 171/378 (45%), Gaps = 43/378 (11%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
TKA ++AID +S+ + G + VP G W TG +L S+ L + + A L S + +++
Sbjct: 86 TKAIQSAIDEVSK---KKGGTVIVPAGTWRTGRISLKSNVNLHISEGAELRFSPEIEDY- 141
Query: 129 VIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG--QGELWWRKFRAGELK 185
LP+ + R E +LI+ ++ +TG G + G G + R ++
Sbjct: 142 ----LPAVFTRNEGVELMSLGALIYANGQENIAVTG-KGKLVGPPDGPVRQRYMNVNVIE 196
Query: 186 YT---------------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
P I + + + I +TL N+P WNV PVY +VI
Sbjct: 197 KVVPADKPVSERVYEGKDGGFIFPPMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNVI 256
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
++GIT+ + V P DGI+ +S N IE C + SGDDC +K+G + GI PT+ +
Sbjct: 257 IRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENV 315
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
+IR I GSE +G I++V D D+++G+R KT R G +++
Sbjct: 316 VIRHCLAREGHGG-ITCGSETAGMIRNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYE 374
Query: 345 --RMTMKTMKWAFWITGS--YGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARL 396
RM ++ F + GS Y + P + P +NI R++V + +
Sbjct: 375 NIRMNLRGDAVKFDMLGSRQYVGELADRLPPRPVNDLTPAYRNITARNIVVDKARTFIDI 434
Query: 397 EGIAGDPFTGICISNVTI 414
GI P + I N +
Sbjct: 435 TGIPESPAANLLIENAIV 452
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 188/405 (46%), Gaps = 57/405 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFL 112
S+ + G + ++ + A ++ +++ + GG + +P G + + G+ L S+ L +
Sbjct: 49 SIYDVTAYGAKSDTSFDSRPAILEAINQCNTNGGGTVLIPAGNYFSKGAILLKSNVNLHI 108
Query: 113 HKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
A L S ++ P++ + TE YS I+ T+V +TG GTIDG
Sbjct: 109 ADGARLEFSTVASDYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVALTG-KGTIDGN 162
Query: 172 GELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTL 207
G + + + A GE Y RP +I+ +N+ + ++ +
Sbjct: 163 GAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQI 222
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
+SP W +HPV+ +V V+ + I + + N DG +P+S TN IE+ GDD +A+K
Sbjct: 223 YDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIK 280
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGV 326
SG DQ G G T+ +IIR F+ I +GSEMSGG++++ ED +G+
Sbjct: 281 SGRDQDGWRIGQATENVIIRNCH----FARWAITIGSEMSGGVRNIFIEDCKIDSCRNGI 336
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAF--WITGSY----GSHPDNNYDPHALPVIQNI 380
K+ + RGG+ +++ +RR+ W + T + G+HP + +NI
Sbjct: 337 YFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLFRNI 387
Query: 381 NYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
D+ V ++A G+ I + N+ ++ PK +Q
Sbjct: 388 CIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK--QAPKAIQ 430
>gi|160886934|ref|ZP_02067937.1| hypothetical protein BACOVA_04948 [Bacteroides ovatus ATCC 8483]
gi|423294892|ref|ZP_17273019.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
gi|156107345|gb|EDO09090.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|392676083|gb|EIY69524.1| parallel beta-helix [Bacteroides ovatus CL03T12C18]
Length = 511
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVLQPGYYQTGALFIKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PSIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I I S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G+
Sbjct: 234 SDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I++V ++ AI + + +R+K+A+ RGG
Sbjct: 294 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTEVKAENVR 367
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 168/383 (43%), Gaps = 33/383 (8%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPV-------I 130
+ +GG + +P GKW +G L S+ L L + + + E P I
Sbjct: 73 IEEISQKGGGTVIIPKGKWKSGRIVLKSNVNLHLAEGSEIEFPGNAEDYLPAVFTRHEGI 132
Query: 131 EPLPS----YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT------IDGQGELWWRKFR 180
E + S Y G D +I+G +L + NG I + R F
Sbjct: 133 EIMGSGSFIYANGEDNIAITGKGVIYGPSLDAEIRQRPNGNTVVEKDILNNAPVEKRVFD 192
Query: 181 AGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239
+ + + +P I + N+ I +T+ S WNV P+Y +VI++GIT+ + + P+
Sbjct: 193 GMDGRGFYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNS-IGIPSG 251
Query: 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299
DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++IR V
Sbjct: 252 DGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQQGHGGV- 310
Query: 300 ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----KTMKWAF 355
GSE +GG+++V D ++ G+R KT R G V D ++ M + KW
Sbjct: 311 TCGSETAGGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDL 370
Query: 356 WITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISN 411
+ Y Y P A+ P I++I+ ++ + E+ + GI P + + I N
Sbjct: 371 LGSKRYVGELAERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPCSNVLIEN 430
Query: 412 VTIELTNKPKKLQWNCTDITGIS 434
I KKL D+ G +
Sbjct: 431 GKI----ISKKLIGALNDVDGFT 449
>gi|325298611|ref|YP_004258528.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324318164|gb|ADY36055.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 484
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 27/313 (8%)
Query: 56 EEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKD 115
E+FG D T +T+A + A+D SR GG + + G + TG+ + L L K
Sbjct: 54 EDFGLEQDTTKLSTEAIQRAVDACSR---AGGGIVAIKKGYYRTGALFIKGGVNLRLEKG 110
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW 175
AVL+AS+D ++P R E + +I + + +TG+ GTID +G+
Sbjct: 111 AVLIASEDFGDYP-----ERMTRIAGIEMQWPAGVINFEGVQNAALTGE-GTIDCRGKFC 164
Query: 176 WRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
W K+ Y + L I + S+++ + TL+ + W VYS
Sbjct: 165 WDKYWTMRKDYVKRGLRWIVDYDAKRIRGIVVSQSKDVTLKGFTLLRTGFWGCQLVYSGH 224
Query: 223 VIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
V GI I + P+TDGI+ DS ++ IE+ YI DD + +K+G D G+ P
Sbjct: 225 CTVDGIRINNNLGGHGPSTDGIDVDSSSDILIENAYIDCNDDNICLKAGRDADGLRVNRP 284
Query: 281 TKQLIIRRLTCISPF-SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVK 339
T++++IR CI+ ++ +GSE SGGI++V A D+ + + + +R+K+A+ RGG V+
Sbjct: 285 TERVVIR--NCIAAKGGGLVTIGSETSGGIRNVLAYDLESKGTSTMLRLKSAMNRGGTVE 342
Query: 340 DVYVRRMTMKTMK 352
+YV R + +K
Sbjct: 343 HIYVTRCKGEDVK 355
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPVIEPLPSYG 137
++ ++GG + +P GKW + L S+ L L K A + A + E P + +
Sbjct: 146 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAV-----FT 200
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 201 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I + + S WNV P+Y +VI++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + N I K KKL D TG +
Sbjct: 498 QVVVENGEI----KCKKLIGALNDATGFT 522
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 49 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 103
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 104 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 162
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 163 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 221
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ +II R +
Sbjct: 222 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 280
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 281 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 340
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 341 AFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 400
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 401 QVVIENGEI----KCKKLIGALNDAAGFT 425
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S G V D T +T A + AID + GG + + PG + TG+ + S L L
Sbjct: 59 SANSLGAVADSTVLSTTAIQKAIDSCA---VSGGGTVTLQPGYYQTGALFIKSGVNLHLD 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E S++I + + I+G+ GT+D +G
Sbjct: 116 KGVTLLAS------PQIHHYPEFRSRVAGIEMTWPSAVINIIDEKNASISGE-GTLDCRG 168
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I + S +I +S TL+ + W +Y
Sbjct: 169 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILY 228
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS T+ +E+C I DD + +KSG D G+
Sbjct: 229 SDHCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRV 288
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
PT++++IR CI+ A +I GSE SG I+++ ++ A + + +R+K+A+ RGG
Sbjct: 289 NRPTEKIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGG 346
Query: 337 FVKDVYVRRMTMKTMK 352
V+++Y+ R+ K ++
Sbjct: 347 TVENIYMTRINAKNVQ 362
>gi|293370061|ref|ZP_06616627.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|299148453|ref|ZP_07041515.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|423288960|ref|ZP_17267811.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
gi|292634853|gb|EFF53376.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|298513214|gb|EFI37101.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|392668724|gb|EIY62218.1| parallel beta-helix [Bacteroides ovatus CL02T12C04]
Length = 511
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVFQPGYYQTGALFIKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PYIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I I S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G+
Sbjct: 234 SDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I++V ++ AI + + +R+K+A+ RGG
Sbjct: 294 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTEVKAENVR 367
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 81 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 135
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 136 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 194
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 195 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 253
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ +II R +
Sbjct: 254 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 312
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 313 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 372
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 373 AFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 432
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 433 QVVIENGEI----KCKKLIGALNDAAGFT 457
>gi|237721218|ref|ZP_04551699.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
gi|229449014|gb|EEO54805.1| glycoside hydrolase family 28 protein [Bacteroides sp. 2_2_4]
Length = 495
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID + GG + PG + TG+ + S L L
Sbjct: 48 SANSFGAVADSTVLSTEAIQKAIDSCAVI---GGGTVVFQPGYYQTGALFIKSGVNLQLD 104
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 105 KGVTLLAS------PYIHHYPEFRSRIAGIEMTWPAAVINIVNEKNASVSGE-GTLDCRG 157
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I I S +I + TL+ + W +Y
Sbjct: 158 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILIERSSDITLKGFTLMRTGFWGCQILY 217
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS N +E+C + DD + +KSG D G+
Sbjct: 218 SDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILVENCDVDCNDDNICIKSGRDADGLRV 277
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I++V ++ AI + + +R+K+A+ RGG
Sbjct: 278 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNVLGYNLEAIGTSAVLRLKSAMNRGG 335
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 336 TIENIYMTEVKAENVR 351
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPVIEPLPSYG 137
++ ++GG + +P GKW + L S+ L L K A + A + E P + +
Sbjct: 132 IAEVSNQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAV-----FT 186
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 187 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 245
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I + + S WNV P+Y +VI++GIT+ +
Sbjct: 246 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS- 304
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 305 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 363
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 364 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 423
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 424 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 483
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + N I K KKL D TG +
Sbjct: 484 QVVVENGEI----KCKKLIGALNDATGFT 508
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 167/354 (47%), Gaps = 36/354 (10%)
Query: 46 ISCRAHSASL--EEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFN 103
++ H+A+L FG GDG +TKA + A+D + + + PG + GS
Sbjct: 11 VALPVHAATLTANNFGAKGDGVADDTKAIQKALDAAAGKH----DTVTLKPGTYRIGSIF 66
Query: 104 LTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITG 163
+ S L L K L Q +P+ +P+ G E ++L+ TDV ITG
Sbjct: 67 VKSGSRLDLPKGVTLRGIQSLDAYPL---MPTRIAG--IEMTWPAALVNVYKQTDVQITG 121
Query: 164 DNGTIDGQGELWWRKFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINS 210
+ GTIDG G WW+ + KY RP LI++ S N+++ L S
Sbjct: 122 E-GTIDGDGSYWWKSYWDLRAKYEPKGLRWASDYDAKRPRLIQVFDSSNVKLDGPMLTRS 180
Query: 211 PSWNVHPVYSSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268
W VH YS V + +TI P+TDGI+ DS + ++ I DD + +K+
Sbjct: 181 GFWTVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDIDSSHDVLVQHADIDVNDDALCLKA 240
Query: 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVR 327
G D G+ PT +++R + I +A + GSE SGG +++ A ++TA+ +GV
Sbjct: 241 GRDSDGLRVNRPTYNVVLRD-SLIRTGAAAVTFGSETSGGFRNIEAYNLTALRGVTNGVL 299
Query: 328 IKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT------GSYGSHPDNNYDPHALP 375
IK+A RGGF +++ V + + +K +T SY S P DP +P
Sbjct: 300 IKSAKVRGGFGENLRVHDLHLDGVKTPIKVTLNWNPAYSYTSLPAGT-DPKTVP 352
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEGKR-IIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IICNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 188/405 (46%), Gaps = 57/405 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFL 112
S+ + G + ++ + A ++ +++ + GG + +P G + + G+ L S+ L +
Sbjct: 59 SIYDVTAYGAKSDTSFDSRPAILEAINQCNTNGGGTVLIPAGNYFSKGTILLKSNVNLHV 118
Query: 113 HKDAVLLASQDEKEW-PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
A L S ++ P++ + TE YS I+ T+V +TG GTIDG
Sbjct: 119 ADGARLEFSTVASDYLPMV-----LTKWEGTECFNYSPFIYAYQCTNVALTG-KGTIDGN 172
Query: 172 GELWWRKFRA------------------------GELKYTRPYLIEIMYSQNIQISNLTL 207
G + + + A GE Y RP +I+ +N+ + ++ +
Sbjct: 173 GAVTFNGWHALQGPALDRLRQMGIDSIPVYERVFGEGYYLRPCMIQFYGCKNVLVEDVQI 232
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
+SP W +HPV+ +V V+ + I + + N DG +P+S TN IE+ GDD +A+K
Sbjct: 233 YDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDPESSTNVLIENMDFNVGDDGIAIK 290
Query: 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGV 326
SG DQ G G T+ +IIR F+ I +GSEMSGG++++ ED +G+
Sbjct: 291 SGRDQDGWRIGQATENVIIRN----CHFARWAITIGSEMSGGVRNIFIEDCKIDSCRNGI 346
Query: 327 RIKTAVGRGGFVKDVYVRRMTMKTMKWAF--WITGSY----GSHPDNNYDPHALPVIQNI 380
K+ + RGG+ +++ +RR+ W + T + G+HP + +NI
Sbjct: 347 YFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYRGGNHP---------TLFRNI 397
Query: 381 NYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
D+ V ++A G+ I + N+ ++ PK +Q
Sbjct: 398 CIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK--QAPKAIQ 440
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 174/394 (44%), Gaps = 50/394 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S +FGG GD +T T+A + AID R +GG + + PG WL+G L S+ TL +
Sbjct: 28 SPADFGGKGDDSTLATRAIQQAID---RCAQQGGGHVTLGPGVWLSGPIVLKSNVTLVIP 84
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG- 172
L A+ D ++ + ++ GR T+ + I + V I G GTIDG G
Sbjct: 85 DGVTLKATPDTAQF-----VDAF-LGRPTQ--PNEAFILANGVRHVAIEG-GGTIDGNGA 135
Query: 173 ELWW-------RKFRAGE-----LKYT---------RPYLIEIMYSQNIQISNLTLINSP 211
+ WW R+G KY RP+L+E+ + +I N+ L NSP
Sbjct: 136 QAWWPAAIALRNTVRSGHPEAFTAKYQGIPLANGMPRPWLVEMNNVTSSEIHNIRLTNSP 195
Query: 212 SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271
WN+ S + + +T+ P T+PNTDGI+ S ++ I+ I +GDD +A+KS
Sbjct: 196 MWNLVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSSSDILIKHADISTGDDHIAIKS--- 252
Query: 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331
GI+ G K I + I+LGSE GI V + + +E+G+R+K+
Sbjct: 253 --GISAGSGVKSENIAIQDSVMRQGHGISLGSETINGIGKVTVSHVRFVGAENGLRVKSG 310
Query: 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL-----------PVIQNI 380
RG + + V +TM + +T SY PVI I
Sbjct: 311 RDRGNKIGPLQVDHVTMTDVATPLLVTDSYSGQAGAAGHALIAPIAAAPVTPTTPVISGI 370
Query: 381 NYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
+ A A L G+ P T + + ++ I
Sbjct: 371 EVNHLAATGAKYAMILSGLPEAPVTDVRLRHIAI 404
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA-VLLASQDEKEWPVIEPLPSYG 137
++ +GG + +P GKW + L S+ L L K A + A + E P + +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFAGRAEDYLPAV-----FT 200
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 201 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + N I K KKL D G +
Sbjct: 498 QVVVENGEI----KCKKLIGALNDAAGFT 522
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ D TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDYSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RGG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 176/353 (49%), Gaps = 18/353 (5%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++E+G G+G S T + I+ + GG + +P G++L+G+ L +
Sbjct: 709 NIKEYGVKGNGY-SETATLQRIINEAAH---NGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A L+++ D E+PVI P+ G + R+ + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKG- 817
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ W+K G RP L+ +IS L +IN SW +H +Y++ + GI I A
Sbjct: 818 VEWKKIPFG--NSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P++DGI+ DS + I I + DDC+++KSG D+ G G P++ ++I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSE--SGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
V A+GSE+SGGI++V +D+E S +R K+ RGG V+++ +T+K
Sbjct: 936 GHGGV-AMGSEISGGIRNVTIRSCL-MDNENWSPLRFKSQPSRGGTVENITFEDITIKGA 993
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ F I + P + + L ++NI+++++ E A + G PF
Sbjct: 994 RSIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKETPF 1045
>gi|336404047|ref|ZP_08584748.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
gi|295086699|emb|CBK68222.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|335943763|gb|EGN05595.1| hypothetical protein HMPREF0127_02061 [Bacteroides sp. 1_1_30]
Length = 511
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID S GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I + S +I + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLKGFTLMRTGFWGCQVLY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G+
Sbjct: 234 SNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I+++ ++ A+ + + +R+K+A+ RGG
Sbjct: 294 NLPTENIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTDVKAENVR 367
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 18/365 (4%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
++ +I +++E+G G+G S T + I+ + GG + +P G++L+G+
Sbjct: 697 KFISIGKNNREYNIKEYGVKGNGY-SETATLQRIINEAAH---NGGGTIVIPAGEYLSGA 752
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L + K+A L+++ D E+PVI P+ G + R+ + +D V
Sbjct: 753 LFFPRGVDLRIEKNAKLISTVDPNEFPVI---PTRFEGIEK---RWRCAFLNFDHSDGVK 806
Query: 162 TGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSS 221
G IDG+G + W+K G RP L+ +IS L +IN SW +H +Y++
Sbjct: 807 VYGEGVIDGKG-VEWKKIPFG--NSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTN 863
Query: 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ GI I A P++DGI+ DS + I I + DDC+++KSG D+ G G P+
Sbjct: 864 GFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPS 923
Query: 282 KQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE--SGVRIKTAVGRGGFVK 339
+ ++I V A+GSE+SGGI++V +D+E S +R K+ RGG V+
Sbjct: 924 ENILIENCHFAYGHGGV-AMGSEISGGIRNVTIRSCL-MDNENWSPLRFKSQPSRGGTVE 981
Query: 340 DVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI 399
++ +T+K + F I + P + + L ++NI+++++ E A + G
Sbjct: 982 NITFEDITIKGARSIFDINMEWRMVPPLSPAHYPLTSLRNIHFKNINGE-AQSAGTMYGF 1040
Query: 400 AGDPF 404
PF
Sbjct: 1041 KEAPF 1045
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S G V D T +T A + AID + GG + + PG + TG+ + S L L
Sbjct: 59 SANSLGAVADSTVLSTTAIQKAIDSCA---VSGGGTVTLQPGYYQTGALFIKSGVNLHLD 115
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I + + I+G+ GT+D +G
Sbjct: 116 KGVTLLAS------PQIHHYPEFRSRVAGIEMTWPAAVINIIDEKNASISGE-GTLDCRG 168
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I + S +I +S TL+ + W +Y
Sbjct: 169 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILY 228
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S + G+TI + P+TDGI+ DS T+ +E+C I DD + +KSG D G+
Sbjct: 229 SDHCTINGLTINNNIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRV 288
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
PT++++IR CI+ A +I GSE SG I+++ ++ A + + +R+K+A+ RGG
Sbjct: 289 NRPTEKIVIR--NCIARKGAGLITCGSETSGSIRNILGYNLDAEGTSTVLRLKSAMNRGG 346
Query: 337 FVKDVYVRRMTMKTMK 352
V+++Y+ R+ K ++
Sbjct: 347 TVENIYMTRINAKNVQ 362
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 145/299 (48%), Gaps = 29/299 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNN 368
DV DI S+ G+R+K++ RG ++++ V + M +++ F WI + + N
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNMIDVQFPFSWIMDWHNEYNRKN 329
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 28/285 (9%)
Query: 90 LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS 149
+F+P G +L G+ L L + AVL D + +P I+ R E ++
Sbjct: 40 VFIPKGIYLVGALFLKDKSHLIFEEGAVLKGRTDIEAFPEIDT-----RVAGVEMKWPAA 94
Query: 150 LIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELK-------------------YTRPY 190
++ + D++I G G IDGQG+ WW + + K RP
Sbjct: 95 ILNVLSAKDILIEG-KGIIDGQGDHWWELYWGKDQKSGTRAEYDQKGLRWIADYAIKRPR 153
Query: 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250
+ +++++ + +L S WN+ YS+ V+V+ + I+ P+TDGI+ DS TN
Sbjct: 154 ACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNV 212
Query: 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQ 310
R+ +C + GDDC+A+KSG D G + ++ + R S + + +GSE+S G+
Sbjct: 213 RVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGYG--VTIGSEVSAGVS 270
Query: 311 DVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF 355
DV DI S+ G+R+K++ RGG ++++ V + M + + F
Sbjct: 271 DVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNMIDVHFLF 315
>gi|365887924|ref|ZP_09426736.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365336466|emb|CCD99267.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 527
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 180/432 (41%), Gaps = 73/432 (16%)
Query: 56 EEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKD 115
FG V DG T N A +AAIDH ++ GG G ++TG L SH L +
Sbjct: 46 RRFGAVNDGKTDNAAAIQAAIDHCAQ---GGGVVPISGGGTFVTGPIQLRSHVVLRIDAP 102
Query: 116 AVLLASQDEKEW-PVIEPLP-SYGRGRDTEG------GRYSSLIFGTNLTDVVITGDNGT 167
VL + D + P P + G GR ++I + D I GD GT
Sbjct: 103 TVLKNTTDHSRYQPAFIGYPFRFANDPAVSGTGPALSGRPEAMISAIDAEDTGIVGD-GT 161
Query: 168 IDGQGE-------------LWWRKFRAGELK----------------YTRPYLIEIMYSQ 198
IDG G L W + A K RP+L+E S+
Sbjct: 162 IDGSGADPAAAATSDNPGALSWWQLAANAKKAGTPYPAFPDIPTSNGLPRPWLVEFYNSR 221
Query: 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILA----PVTSPNTDGINPDSCTNTRIED 254
+++I + L NSP WN+ Y + V+V G+ + P +PNTDGI+ T R+ +
Sbjct: 222 HLRIRGVLLTNSPMWNLGLRYDTDVVVDGLRVYNNANDPTGAPNTDGIDLVGSTGIRLVN 281
Query: 255 CYIVSGDDCVAVKSGWDQYGIAY-GMPTKQLIIRRLTCIS-PFSAV------------IA 300
I +GDD +A+KSG A+ G+PT P S V ++
Sbjct: 282 LDIDTGDDNLALKSGLPGIDPAHPGVPTFAYYKPPYNLPKLPLSHVDIAHSTFKRGHGLS 341
Query: 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360
+GSE G+ +RA+DIT + +++G RIKT RG + + + R+TM + I+
Sbjct: 342 VGSETVNGVNHIRAQDITFLGTDNGFRIKTGRDRGNEIFGMKISRLTMTDVPTPISISEY 401
Query: 361 YGSHPDNNYD-------PHALPVIQNINYRDMVAEN-------VTMAARLEGIAGDPFTG 406
Y + P P P + +I D+ A N VT + G+ P
Sbjct: 402 YPTIPTATQGDLVQPQIPETQPRVHDIAISDVTATNPQTVRNVVTSGGLIIGVPESPVLN 461
Query: 407 ICISNVTIELTN 418
I +S ++I N
Sbjct: 462 ITLSRISITSAN 473
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 179/395 (45%), Gaps = 30/395 (7%)
Query: 41 FEYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG 100
+ IS + + ++G G +T A AI+ ++ GG + PPG++LTG
Sbjct: 8 IQLLVISAVSAIHDVTKYGADRTGRVPSTDAIARAINDA---ETHGGGLVHFPPGRYLTG 64
Query: 101 SFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR----YSSLIFGTNL 156
L S+ + + ++ D +P PL G+ +G R ++ LI
Sbjct: 65 PIELKSNMIMDVGDGTIITFLDDPALYP---PL----HGKLPDGQRRILPFTPLIRAWGQ 117
Query: 157 TDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVH 216
+V I G N DG+GE+WW + TRP I N+ + T+ +SP +NV+
Sbjct: 118 KNVGIRG-NVIFDGRGEVWWDRLPP---PATRPIFINFFDCHNVVLKGFTIKSSPMFNVN 173
Query: 217 PVYSSSVIVQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQ 272
+YS+ +++ GI I P + PNTDGIN S I + +GDDC+A+ + W
Sbjct: 174 ILYSNGIVIDGIRIRNPESYHGKGPNTDGINVVSVRRLHITGVDVATGDDCIAINA-WGH 232
Query: 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332
+PT+ ++I + +S +++GS +GG++++ + + G+ IKT
Sbjct: 233 G--KERIPTEDVLIED-SHMSIGHGGVSIGSVTAGGLRNITVRNCVFDGTTRGLLIKTNR 289
Query: 333 GRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDP--HALPVIQNINYRDMVAEN 389
RGG ++D++ + M M+W IT Y D+ P P ++NI Y ++ +
Sbjct: 290 ERGGTIEDIHYENIVMNNMRWEGIAITDLYNDK-DSGRKPIGDQTPFVRNIKYNNVRGSS 348
Query: 390 VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
L G+ P I I N I +LQ
Sbjct: 349 KKSPIMLIGLPEAPVENIEIENCDIRSKRPNFQLQ 383
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 169/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S K++ LP+ +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAKDY-----LPAVFT 525
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG---QGELWWRKFRAGELK--------- 185
R E ++ I+ ++ ITG+ GTI G E+ R A ++
Sbjct: 526 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 186 ------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 585 EQRIYDGMKGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ +II R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 702
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPNVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|262408433|ref|ZP_06084980.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|294643092|ref|ZP_06720926.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808960|ref|ZP_06767684.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508645|ref|ZP_08788271.1| glycoside hydrolase family 28 [Bacteroides sp. D1]
gi|262353985|gb|EEZ03078.1| glycoside hydrolase family 28 [Bacteroides sp. 2_1_22]
gi|292641551|gb|EFF59735.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294443841|gb|EFG12584.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345455055|gb|EEO51472.2| glycoside hydrolase family 28 [Bacteroides sp. D1]
Length = 487
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 27/303 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG D + +T A +AAID +GG + V G + G+ + S L L K
Sbjct: 57 KFGLRNDTSVFSTPAIQAAIDAC---HQQGGGTVVVAQGYYKIGALFIKSGVNLHLSKGT 113
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
LLAS + +++P PS R E S++I + + +TG+ G ID +G+++W
Sbjct: 114 TLLASDNIQDYP---EFPS--RIAGIEMTWPSAVINIMDAENAALTGE-GFIDCRGKVFW 167
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ A +Y + L + + S++I + + TL+ + W +YS
Sbjct: 168 DKYWAMREEYEKKNLRWIVDYDCKRVRGVLVSNSKHITLKDFTLVRTGFWACQILYSDHC 227
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
V G+TI V P+TDGI+ DS TN +E+C + DD + +K+G D G+ PT
Sbjct: 228 SVSGLTINNNVGGHGPSTDGIDIDSSTNILVENCDVDCNDDNICIKAGRDADGLRVNRPT 287
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +++R CI+ A ++ GSE SG I++V A D+ A + S +R+K+++ RGG V++
Sbjct: 288 ENVVVR--NCIARKGAGLLTCGSETSGSIRNVLAHDLIAYGTGSVLRLKSSMNRGGTVEN 345
Query: 341 VYV 343
+YV
Sbjct: 346 IYV 348
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 155/333 (46%), Gaps = 41/333 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +FG V G NTKA AAID ++ GG ++ VP G WLTG + S+ L L
Sbjct: 42 KITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLE 98
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
+DAVL + + +++ LP+ E YS L++ +V I+G GT+ +
Sbjct: 99 EDAVLSFTDNPEDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 152
Query: 173 ELW--WRKFRAGELK-------------------------YTRPYLIEIMYSQNIQISNL 205
W W K A L+ + RP+LI +N+ +
Sbjct: 153 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMAIGENHLRPHLIHFNRCKNVMLDGF 212
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H IV+ + + A N DGI+ + N +EDC GDD V
Sbjct: 213 KIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 270
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 271 IKAGRNQDAWRLNTPCENIVIRNCRILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 329
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +KT RGGF++++Y++ + T + I
Sbjct: 330 LFFVKTNHRRGGFIENIYMKNVASGTAQRVLEI 362
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 526 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ +II R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 702
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|298482095|ref|ZP_07000283.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271652|gb|EFI13225.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 511
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 160/316 (50%), Gaps = 29/316 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T+A + AID S GG + + PG + TG+ + S L L
Sbjct: 64 SANSFGAVADSTVLSTEAIQKAIDSCS---VSGGGTVTLQPGYYQTGALFVKSGVNLQLD 120
Query: 114 KDAVLLASQDEKEWPVIEPLPSY-GRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
K LLAS P I P + R E +++I N + ++G+ GT+D +G
Sbjct: 121 KGVTLLAS------PHIHHYPEFRSRIAGIEMTWPAAVINIVNEKNAAVSGE-GTLDCRG 173
Query: 173 ELWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVY 219
+++W K+ +Y L I + S ++ + TL+ + W +Y
Sbjct: 174 KVFWDKYWEMRKEYEAKGLRWIVDYDCKRVRGILVERSSDVTLKGFTLMRTGFWGCQVLY 233
Query: 220 SSSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277
S+ + G+ I + P+TDGI+ DS TN IE+C + DD + +KSG D G+
Sbjct: 234 SNYCTIDGLVINNNLGGHGPSTDGIDIDSSTNILIENCDVDCNDDNICIKSGRDADGLRV 293
Query: 278 GMPTKQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGG 336
+PT+ ++IR CI+ A +I GSE SG I+++ ++ A+ + + +R+K+A+ RGG
Sbjct: 294 NLPTENVVIR--NCIARKGAGLITCGSETSGSIRNILGYNLQAVGTSAVLRLKSAMNRGG 351
Query: 337 FVKDVYVRRMTMKTMK 352
++++Y+ + + ++
Sbjct: 352 TIENIYMTDVKAENVR 367
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 175/353 (49%), Gaps = 18/353 (5%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++E+G G+G S T + I+ GG + +P G++L+G+ L +
Sbjct: 709 NIKEYGVKGNGY-SETATLQRIINEAVH---NGGGTIVIPAGEYLSGALFFPRGVDLRIE 764
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A L+++ D E+PVI P+ G + R+ + +D V G IDG+G
Sbjct: 765 KNAKLISTVDPNEFPVI---PTRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKG- 817
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ W+K G RP L+ +IS L +IN SW +H +Y++ + GI I A
Sbjct: 818 VEWKKIPFG--NSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 875
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P++DGI+ DS + I I + DDC+++KSG D+ G G P++ ++I
Sbjct: 876 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 935
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSE--SGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
V A+GSE+SGGI++V +D+E S +R K+ RGG V+++ +T+K
Sbjct: 936 GHGGV-AMGSEISGGIRNVTIRSCL-MDNENWSPLRFKSQPSRGGTVENITFEDITIKGA 993
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ F I + P + + L ++NI+++++ E A + G PF
Sbjct: 994 RSIFDINMEWRMVPPLSPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 1045
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 176/388 (45%), Gaps = 51/388 (13%)
Query: 86 GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145
G + VP G WL+G +L S+ L L + A+L S D +++ + P+ + G E
Sbjct: 88 GSGSVIVPAGIWLSGKIHLESNVNLHLARGAILRFSDDPQDY--LPPVQTSWEG--IECF 143
Query: 146 RYSSLIFGTNLTDVVITGDNGTIDGQGELW--W--------------------------R 177
YS LI+ + +V ITG G I+ + W W R
Sbjct: 144 NYSPLIYAFDCENVAITGP-GRIEPVLDRWKIWSARPKLHMDALVALYDMAYRNVPVADR 202
Query: 178 KFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSP 237
+ G+ RP+LI+ +N+ + ++++ SP W +HP+ V ++ ++I A
Sbjct: 203 QMAIGQ-NNLRPHLIQFNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSIQA--HGH 259
Query: 238 NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297
N DG++P+ N IEDC GDD V+VKSG D P + +++R ++
Sbjct: 260 NNDGVDPEMSQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRVLNGHQ- 318
Query: 298 VIALGSEMSGGIQDV-----------RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
++A+GSE+SGGI+++ R D A+ + + +KT RGG+V++V++ R+
Sbjct: 319 LMAVGSELSGGIENIWVDDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRV 378
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDP---HALPVIQNINYRDMVAENVTMAARLEGIAGDP 403
T T+ + + + P L I+ + D+ + A ++G P
Sbjct: 379 TATTLAGSVLAVETDVLYQWRTLLPTYVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLP 438
Query: 404 FTGICISNVTIELTNKPKKLQWNCTDIT 431
+ +S V +E + + N D+T
Sbjct: 439 IQDVRLSRVRVERVSGTPTIVENARDVT 466
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A L S +++ LP+ +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAELEFSGCAEDY-----LPAVFT 200
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 201 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + N I K +KL D G +
Sbjct: 498 QVVVENGEI----KCRKLIGALNDAAGFT 522
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 43/328 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G + DG T+NTKA AI SR GG ++ VP G+WLTG + S+ L L +
Sbjct: 57 INKYGAIADGKTNNTKAIARAIAACSR---AGGGRVVVPAGEWLTGPIHFKSNVNLHLSE 113
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTI----- 168
+AVL + + ++ LP+ E YS L++ + ++ ITG GT+
Sbjct: 114 NAVLRFTDNPDDY-----LPAVMTSWEGMECYNYSPLVYAFDCENIAITG-TGTLQPIMD 167
Query: 169 -------------DGQGELW----------WRKFRAGELKYTRPYLIEIMYSQNIQISNL 205
D EL+ R+ GE + RP+LI QN+ +
Sbjct: 168 TWRKWFKRPQPHMDALAELYTMASTDVPVKERQMAKGE-NHLRPHLIHFNRCQNVLLDQF 226
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H IV+ + + A N DG++ + N +E+C GDD V
Sbjct: 227 KIRESPFWTIHLYLCDGGIVRNLDVRA--HGHNNDGVDLEMSRNFLVENCKFDQGDDAVV 284
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR I + ++ +GSEMSGGI++V D A DS
Sbjct: 285 IKAGRNQDAWRLDTPCENIVIRNCDIIKGHT-LLGIGSEMSGGIRNVYMHDCAAPDSVFR 343
Query: 326 VRI-KTAVGRGGFVKDVYVRRMTMKTMK 352
+ KT RGGF++++++ + M+
Sbjct: 344 LFFAKTNHRRGGFIENIHMENVKAGKMQ 371
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 526 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ +II R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQ 702
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|212690878|ref|ZP_03299006.1| hypothetical protein BACDOR_00366 [Bacteroides dorei DSM 17855]
gi|265752316|ref|ZP_06088109.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345512460|ref|ZP_08791986.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423239837|ref|ZP_17220952.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
gi|212666560|gb|EEB27132.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438029|gb|EEO48106.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263237108|gb|EEZ22578.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392645462|gb|EIY39189.1| hypothetical protein HMPREF1065_01575 [Bacteroides dorei
CL03T12C01]
Length = 494
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTQLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS+D +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASEDIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S++I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADNVR 359
>gi|237712634|ref|ZP_04543115.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423228996|ref|ZP_17215401.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|423244835|ref|ZP_17225909.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
gi|229453955|gb|EEO59676.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634749|gb|EIY28661.1| hypothetical protein HMPREF1063_01221 [Bacteroides dorei
CL02T00C15]
gi|392641222|gb|EIY35006.1| hypothetical protein HMPREF1064_02115 [Bacteroides dorei
CL02T12C06]
Length = 494
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTQLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS+D +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASEDIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S++I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADNVR 359
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
T + AID +++ +GG + +P GKWLTG +L S L L + A L S + K +
Sbjct: 90 TAIIQKAIDDINQ---QGGGTVIIPRGKWLTGRISLKSFVNLHLEEGAELHFSGEIKNY- 145
Query: 129 VIEPLPS-YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG--QGELWWRKFRAGELK 185
LP+ + R E + I+ ++ +TG I L R G ++
Sbjct: 146 ----LPAVFTRNEGIELMSLGACIYANGQENIAVTGKGKLIGPPLDSPLRKRFMNVGVIE 201
Query: 186 ---------------------YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
P I + +NI I ++L +P WNV P+Y +VI
Sbjct: 202 DVVPLDKPVSERVYEGHNDEFIFLPMFISPINCKNILIEGISLERTPFWNVVPIYCENVI 261
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
++GIT+ + V P DGI+ +S N IE C + GDDC +K+G + G+ PT+ +
Sbjct: 262 IRGITVNS-VGIPRGDGIDIESSKNVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTENV 320
Query: 285 IIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343
++R C++ I +GSE + I ++ D D+ G+R KT RGG + Y
Sbjct: 321 VVR--FCLAKEGHGGITVGSETAAKINNLYVHDTVFDDTGVGIRFKTRRPRGGGGANYYY 378
Query: 344 RRMTMKTMKWAF-W-ITGSYGSHPDNNYDPHALPV------IQNINYRDMVAENVTMAAR 395
R+ M AF W + GS ALP+ +N + +D++ EN R
Sbjct: 379 ERIRMNLRDEAFRWDMLGSPMHVGKLAERLPALPINSLTPSFKNTSAKDIIVENAKAFVR 438
Query: 396 LEGIAGDPFTGICISNVTIE 415
+EGI P + N I+
Sbjct: 439 IEGIPETPMQNFRLENAVIK 458
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 49/342 (14%)
Query: 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHF 108
RA + +FG D + T A AID R G + VP G W TG NL SH
Sbjct: 51 RAQRFPITDFGASTDDQAATTAAIAKAIDAAHR---AGSGNVIVPQGIWPTGKINLKSHV 107
Query: 109 TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTI 168
L L K A LL S+ +++ + P+ + G E YS L++ + +V ++G+ G +
Sbjct: 108 NLHLSKGATLLFSEKPEDY--LPPVQTSWEG--IECFNYSPLVYAFDCENVGLSGE-GKL 162
Query: 169 DGQGELW--WRK---------FRAGELKYT----------------RPYLIEIMYSQNIQ 201
+ ++W W K R +L Y RP+ ++ +++
Sbjct: 163 KAKLDVWQVWYKRPKPHMDALVRLYDLAYKGVPVEARQMVEGENHLRPHFVQFNRCRHVL 222
Query: 202 ISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261
I ++++ +SP W +HP+ V+++ + + A N DG++P+ N IEDC GD
Sbjct: 223 IEDISIEDSPFWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDPEMSQNVLIEDCVFDQGD 280
Query: 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDV--------- 312
D V+VKSG D PTK +++R I ++A+GSE+SGGI+++
Sbjct: 281 DAVSVKSGRDMDAWRLNTPTKNVVMRNCR-IKNGHQLMAVGSELSGGIENIFVDNCHFVG 339
Query: 313 --RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +D A+ + + +KT RGG+VK++++R ++ ++
Sbjct: 340 DGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNVSATKIQ 381
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 146 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGCAEDY-----LPAVFT 200
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 201 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPPMDAEIRKRPNGASVVEKDVPWDMPI 259
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + NI I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 260 EQRIYDGMEGRTFYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRGITVNS- 318
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 319 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 377
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 378 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 437
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 438 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 497
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ + N I K +KL D G +
Sbjct: 498 QVVVENGEI----KCRKLIGALNDAAGFT 522
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 79 LSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS-YG 137
++ +GG + +P GKW + L S+ L L K A + S +++ LP+ +
Sbjct: 471 IAEVSKQGGGTVVIPEGKWKSARIVLKSNVNLHLAKGAEIEFSGRAEDY-----LPAVFT 525
Query: 138 RGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG-----------------QGELWW---- 176
R E ++ I+ ++ ITG+ GTI G + ++ W
Sbjct: 526 RHEGVEIMGPAAFIYANGENNIAITGE-GTIYGPSMDAEIRKRPNGASVVEKDVPWDMPI 584
Query: 177 --RKFRAGELK-YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
R + E + + RP I + N+ I +T+ S WNV P+Y +VI++GIT+ +
Sbjct: 585 EQRIYDGMEGRTFYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS- 643
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P+ DGI+ +SC N IE C + GDDC +K+G + G+ G PT+ ++I R +
Sbjct: 644 TKVPSGDGIDIESCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQ 702
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTM----K 349
I GSE +G I+++ D + +G+R KT RGG + Y R+ M K
Sbjct: 703 HGHGGITCGSETAGVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGK 762
Query: 350 TMKWAFWITGSYGSHPDNNYDPHAL----PVIQNINYRDMVAENVTMAARLEGIAGDPFT 405
W + Y Y + P ++NI +D + E+ GI PF
Sbjct: 763 AFTWDLLGSAYYMGELAARYPARKVNRLTPDVKNILIKDFIVESADQFFTANGIPEIPFN 822
Query: 406 GICISNVTIELTNKPKKLQWNCTDITGIS 434
+ I N I K KKL D G +
Sbjct: 823 QVVIENGEI----KCKKLIGALNDAAGFT 847
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 39/328 (11%)
Query: 56 EEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKD 115
E +GG DG T NT A + A+D +++ GG + + G WL+G L S+ T L +
Sbjct: 17 EIYGGRADGNTINTDAIQKAVDMCAQY---GGGVVLLSKGVWLSGPITLKSNITFSLGQG 73
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE-L 174
VL A+ + ++ D + + I ++ DV I G GTIDG G+
Sbjct: 74 TVLKANNTDDQFK--------NAFIDYPVQKGEAFILADHVHDVSIVG-QGTIDGDGQQT 124
Query: 175 WWRKFRA------------GELKYT---------RPYLIEIMYSQNIQISNLTLINSPSW 213
WW K + + +Y+ RP+LIE QN+ + + L N+P W
Sbjct: 125 WWAKAKQINALLHQGNDQLFKQEYSGVPIANGVPRPWLIEFNDVQNVHLKGVLLTNAPMW 184
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
NV S V + I I P SPNTDGI+ S +I D I +GDD +++KSG Q
Sbjct: 185 NVVIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSSQYIQISDVDISTGDDNISIKSGLQQ- 243
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333
+P + + I+ + I++GSE + GI V ++I S +G+RIK+
Sbjct: 244 --GNALPARDITIK--NSLMHDGHGISIGSETANGIGKVTIQNIHFSGSTNGIRIKSQRD 299
Query: 334 RGGFVKDVYVRRMTMKTMKWAFWITGSY 361
RG + + V + M+ + I SY
Sbjct: 300 RGNSIGPITVDHIQMENVTNPIVINASY 327
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG V G NTKA +AI+ ++ GG ++ VP G WLTG + S+ L+L +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+AVL + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGE-NHLRPHLIHFNRCKNVLLDGF 224
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 225 KICESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 282
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 283 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF+++VY++ + T +
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|427385675|ref|ZP_18881982.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
gi|425726714|gb|EKU89577.1| hypothetical protein HMPREF9447_03015 [Bacteroides oleiciplenus YIT
12058]
Length = 532
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 33/339 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S FG V D T +T A + AID + GG + + PG +LTG+ + S L +
Sbjct: 85 SANSFGAVADSTVLSTNAIQKAIDSCAL---SGGGTVTLQPGYYLTGALFVKSGVNLQIS 141
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K L+A D +P R E +++I ++G+ GT+D +G+
Sbjct: 142 KGVTLIACPDIYCYPEFR-----SRIAGIEMIWPAAVINIIGEKKASVSGE-GTLDCRGK 195
Query: 174 LWWRKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYS 220
++W K+ A +Y L I + S +I +SN TL+ + W +YS
Sbjct: 196 IFWDKYWAMRKEYEAKGLRWIVDYDCKRVRGILVERSSDITLSNFTLMRTGFWGCQILYS 255
Query: 221 SSVIVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYG 278
V G+ I + P+TDGI+ DS TN IE+C I DD + +K+G D G+
Sbjct: 256 DHCTVDGLNIDNNIGGHGPSTDGIDIDSSTNILIENCTIDCNDDIICLKAGRDADGLRVN 315
Query: 279 MPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
T+ ++IR T + +I GSE SG I+++ A D+ AI + +K+A+ RGG V
Sbjct: 316 RSTENVLIRNCTA-HRGAGLITCGSETSGSIRNILAYDLKAIGTSVVFLLKSAMTRGGTV 374
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNN--YDPHALP 375
++VYV R+ + ++ F G+ P+ N Y LP
Sbjct: 375 ENVYVTRVEAENVRQVF------GADPNWNPKYSYSTLP 407
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 31/309 (10%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +FG GDG T NT A + AI+ + + GG + VP G ++TG+ L S L L
Sbjct: 58 SILDFGARGDGKTDNTAAIRKAIETAN---ARGGGHVVVPRGTFVTGAVYLKSDVDLHLA 114
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL D ++P + R E S +I+ +++ +TG GT+D G
Sbjct: 115 AGAVLAFDSDASKFPNV-----LTRYEGIECVNRSPMIYAYKESNIAVTG-QGTLDAAGT 168
Query: 174 LWW--------------------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSW 213
W R+ G R +E + I +TL N W
Sbjct: 169 ASWNKGKDREYLESLVAKGIPPERRIVPGSGHTMRSTFVEPYSCDTVLIQGITLKNPMFW 228
Query: 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
+HP +V + G+ A NTD +P+SC + I + ++ + DD +A+KSG D
Sbjct: 229 QLHPTLCRNVTIDGVRTDASTAHSNTDACDPESCDHVVIVNSHLGAHDDNIALKSGRDAD 288
Query: 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAI-DSESGVRIKTAV 332
G G+P + +++ + A I GSE +GGI+DV A +T +++ G+ +K+
Sbjct: 289 GRRVGVPCRNIVVANCVMDGNWGA-ITCGSEQTGGIRDVYAYKLTVTGETKYGLYVKSNT 347
Query: 333 GRGGFVKDV 341
RGGF ++V
Sbjct: 348 LRGGFTENV 356
>gi|357450135|ref|XP_003595344.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355484392|gb|AES65595.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 297
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 101/179 (56%), Gaps = 34/179 (18%)
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
+ + +L+ F GG+QL VPPG WLT FNLTSH + + + + DEK WP++
Sbjct: 135 LRPVVFNLTDFDG-GGAQLNVPPGLWLTAPFNLTSHMSKCMKTYSKI---NDEKYWPLMP 190
Query: 132 PLPSYGRGRDTEGGRYSSLIFGTNLTDVV-----ITGDNGTIDGQGELWWRKFRAGELKY 186
LPSYG GR+ G RYSSLI G NLT+V I NGTIDGQG WW K+R L +
Sbjct: 191 ALPSYGYGREHPGPRYSSLIHGQNLTEVSLESCPILRHNGTIDGQGRTWWTKYRQNLLNH 250
Query: 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPV-TSPNTDGINP 244
TR L++IM+S+ YS +V TILAP+ +PNTDGI+P
Sbjct: 251 TRGPLVQIMWSKR-------------------YSKNV-----TILAPLDDAPNTDGIDP 285
>gi|319643143|ref|ZP_07997773.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520565|ref|ZP_08799952.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835085|gb|EET15394.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385221|gb|EFV66170.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 494
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 158/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTRLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS+D +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASEDIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S+ I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRQITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADHVR 359
>gi|390437171|ref|ZP_10225709.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 443
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +F V DG T +T + A+D ++ + GG +L +P G++ +G NL S F L L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL+ASQ ++ ++ L + ++ L++ ++ I+G G IDG GE
Sbjct: 61 AGAVLIASQRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGDGE 112
Query: 174 LWWRKFRAGE----LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
W+ R + + RP +I + + ++ T++ +P W VH V V + +T
Sbjct: 113 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
S +S +G+E ++DV T DS G+ I + G +RR+
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDGGA-------MRRLLFS 282
Query: 350 TMKWA 354
+ +A
Sbjct: 283 NLTFA 287
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 43/329 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +FG V G NTKA AAID ++ GG ++ VP G WLTG + S+ L L
Sbjct: 55 KITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNINLCLE 111
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTID--- 169
++AVL + + +++ LP+ + E YS L++ +V I+G GT+
Sbjct: 112 ENAVLSFTDNPEDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 165
Query: 170 GQGELWW-------------------------RKFRAGELKYTRPYLIEIMYSQNIQISN 204
G ++W+ R+ GE + RP+LI +N+ +
Sbjct: 166 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGE-NHLRPHLIHFNRCKNVMLDG 224
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+ SP W +H IV+ + + A N DGI+ + N +EDC GDD V
Sbjct: 225 FKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAV 282
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 283 VIKAGRNQDAWRLNTPCENIVIRNCRILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVM 341
Query: 325 GV-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF++++Y++ + T +
Sbjct: 342 RLFFVKTNHRRGGFIENIYMKNVASGTAQ 370
>gi|372275542|ref|ZP_09511578.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 443
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +F V DG T +T + A+D ++ + GG +L +P G++ +G NL S F L L
Sbjct: 4 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 60
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL+ASQ ++ ++ L + ++ L++ ++ I+G G IDG GE
Sbjct: 61 AGAVLIASQRLADYQAVQALSCAEKS-------HNVLLYALGQRNITISG-TGRIDGDGE 112
Query: 174 LWWRKFRAGE----LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
W+ R + + RP +I + + ++ T++ +P W VH V V + +T
Sbjct: 113 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 172
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
S +S +G+E ++DV T DS G+ I + G +RR+
Sbjct: 231 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDGGA-------MRRLLFS 282
Query: 350 TMKWA 354
+ +A
Sbjct: 283 NLTFA 287
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%)
Query: 305 MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
MSGGI D+ + DS G+ KT+ GRGG+++DV + + M+ + TG+ +H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 365 PDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQ 424
PD+++DP LP I ++ ++M N+++A L GI G PFT IC+SN+ +
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 425 WNCTDITGISSGVTPKPCELLPD 447
W+C+D++G S V P+PC L D
Sbjct: 121 WSCSDVSGYSEAVFPEPCTELRD 143
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 43/329 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +FG V G NTKA AAID ++ GG ++ VP G WLTG + S+ L L
Sbjct: 53 KITDFGAVPGGEVDNTKAIAAAIDACNK---AGGGRVVVPAGIWLTGPVHFKSNVNLCLE 109
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTID--- 169
+DAVL + + +++ LP+ + E YS L++ +V I+G GT+
Sbjct: 110 EDAVLSFTDNPEDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 163
Query: 170 GQGELWW-------------------------RKFRAGELKYTRPYLIEIMYSQNIQISN 204
G ++W+ R+ GE + RP+LI +N+ +
Sbjct: 164 GTWKVWFKRPAPHLQALKELYTKASTNVPVIERQMATGE-NHLRPHLIHFNRCKNVMLDG 222
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+ SP W +H IV+ + + A N DGI+ + N +EDC GDD V
Sbjct: 223 FKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAV 280
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA S
Sbjct: 281 VIKAGRNQDAWRLNTPCENIVIRNCRILKGHT-LLGIGSEISGGIRNIYMHDCTAPYSVM 339
Query: 325 GV-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF++++Y++ + T +
Sbjct: 340 RLFFVKTNHRRGGFIENIYMKNVASGTAQ 368
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 63/402 (15%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
+FG GDGTT +T A + AID + ++ L + PG +LTGS L S+ L L K
Sbjct: 82 DFGAKGDGTTDDTNALQKAIDATAAKKA----TLVLQPGTYLTGSLFLKSNMALRLDKGV 137
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRY----SSLIFGTNLTDVVITGDNGTIDGQG 172
L Q+ + SY R + G S+L+ DV I G+ GTIDG G
Sbjct: 138 TLTGKQN---------IESYPRQKTRIAGIEIVWPSALLNVYEQADVHIYGE-GTIDGNG 187
Query: 173 ELWWRKFR-------------AGELKYTRPYLIEIMYSQNIQISN-LTLINSPSWNVHPV 218
++W+ F A + RP LI++ S+ I++ L + + W + V
Sbjct: 188 MVFWQTFWDKRNVYEGKGLRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIV 247
Query: 219 YSSSVIVQGITIL--APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276
YS+ V V + I + P+TDGI+ DS + +E I DD + +K+G D G+
Sbjct: 248 YSNDVKVSNVVIRNNSDGKGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLR 307
Query: 277 YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE----SGVRIKTAV 332
PT+ ++IR + I A + GSE SG I+++ D+ +D + SG+ K+A
Sbjct: 308 VNRPTEHVVIRD-SIIRHAEAGVTFGSETSGSIRNI---DVYNLDVQGPVYSGIFFKSAH 363
Query: 333 GRGGFVKDVYVRRMTMKTMKWAF-----WI-TGSYGSHPD--NNYDPH------------ 372
RGG V D+ +R M ++ + A W+ SY P N H
Sbjct: 364 VRGGTVSDIRIRDMKVQNAEAAVRVDLNWLPVYSYPVIPPGIKNVPEHWKILATPVPKEK 423
Query: 373 ALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTI 414
+P +++I+ ++ AE A ++G A P + SN+ I
Sbjct: 424 GMPKLRDIHISNIKAE-ANAAFLMQGYAEAPLQNVHFSNMHI 464
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG V G NTKA +AI+ ++ GG ++ VP G WLTG + S+ L+L +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+AVL + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 166 TWKVWFKRPQPHLEALKELYTKASTNIPVIERQMAIGE-NHLRPHLIHFNRCKNVLLDGF 224
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 282
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 283 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF+++VY++ + T +
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|308189023|ref|YP_003933154.1| polygalacturonase [Pantoea vagans C9-1]
gi|308059533|gb|ADO11705.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 444
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 25/305 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +F V DG T +T + A+D ++ + GG +L +P G++ +G NL S F L L
Sbjct: 5 SLADFHPVADGETPDTAVLQRAMDQIA---AAGGGRLTLPAGRYRSGCLNLPSDFELHLE 61
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL+AS ++ ++ L + ++ L++ +++I+G G IDG+GE
Sbjct: 62 AGAVLIASPRLADYQAVQALSCAEKS-------HNVLLYALGQRNIIISG-TGRIDGEGE 113
Query: 174 LWWRKFRAGE----LKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
W+ R + + RP +I + + ++ T++ +P W VH V V + +T
Sbjct: 114 AWFAAERDEQGYRLPRADRPRIIVFEDCEQVTLTAFTIVQAPMWTVHLVSCRHVHIDHLT 173
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I +T PNTD ++ DSC + + Y+ + DD + +K+ A P +Q++I
Sbjct: 174 IDNAMTMPNTDALDIDSCEAVFVSNSYLSAADDAICIKT--THKPAALRRPARQIMITNC 231
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
S +S +G+E ++DV T DS G+ I + G +RR+
Sbjct: 232 LLRS-YSCAFKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDGGA-------MRRLLFS 283
Query: 350 TMKWA 354
+ +A
Sbjct: 284 NLTFA 288
>gi|399025028|ref|ZP_10727046.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398079129|gb|EJL70001.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 337
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 61/285 (21%)
Query: 42 EYSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS 101
+ + S A++ S+ ++GGV G+ NT+AF+ AID LS+ +GG +L VP G WLTG
Sbjct: 37 QVAETSFAANTVSIIQYGGVAGGSVKNTEAFRKAIDDLSK---KGGGKLVVPRGMWLTGP 93
Query: 102 FNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVI 161
L S+ L + + A ++ S+D+ ++P+++ S+ G +T R S + N T++ I
Sbjct: 94 IELKSNINLHVEEGAFIIFSKDKNDYPLVD--VSF-EGLNTI--RCQSPVSARNATNIAI 148
Query: 162 TGDNGTIDGQGELW------------WRKFRAG--------------------------- 182
TG G IDG G+ W W++ A
Sbjct: 149 TG-KGVIDGSGDAWRAIKKGKVSESEWKEITASGGILSSDGKTWYPSESYKKGFESSSSF 207
Query: 183 ---------ELK----YTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
ELK + RP ++ ++ + + T NSP+WN+HP+ S+VI++ +T
Sbjct: 208 NVPDRISKEELKSVKDFLRPVMVSLVGCDKVLLDGPTFQNSPAWNLHPLMCSNVILKNLT 267
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+ P S N DG++ +SC N I + GDD + +KSG ++ G
Sbjct: 268 VRNPWFSQNGDGVDLESCKNVLIYNNTFDVGDDAICIKSGKNEDG 312
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG V G NTKA +AI+ ++ GG ++ VP G WLTG + S+ L+L +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+AVL + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 166 TWKVWFKRPQSHLEALKELYTKASTNIPVIERQMAIGE-NHLRPHLIHFNRCKNVLLDGF 224
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 282
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 283 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF+++VY++ + T +
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|365899028|ref|ZP_09436949.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3843]
gi|365420123|emb|CCE09491.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3843]
Length = 532
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 202/489 (41%), Gaps = 77/489 (15%)
Query: 14 CIILLVGIIISLNTNGVESRKARNSDWFEYSAISCRAHSASLEEFGGVGDGTTSNTKAFK 73
C+ L + + + + R R+ + C HS +G VGDG T N A +
Sbjct: 14 CVASLAAVGTARANDIMNDRGGRDYGDRDDRFRQCDPHS-----YGAVGDGKTDNATAIQ 68
Query: 74 AAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP---VI 130
AID +R S GG G ++TG L S L + VL + D + +
Sbjct: 69 TAIDRCAR--SGGGIVRISGGGTYITGPIELKSRVYLRIDAPTVLKNTTDHSRYQPAFIG 126
Query: 131 EPL-----PSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG------------- 172
P P+ T G+ ++I ++ + I GD GTIDG G
Sbjct: 127 YPFRFANDPTVTGTGPTLPGKPEAMISAVDVVESGIIGD-GTIDGSGADPAAAATSDNPS 185
Query: 173 ELWWRKFRAGELKYT---------------RPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
L W + A T RP+L+E S++I+I + L NSP W++
Sbjct: 186 ALSWWQLAANAKTLTSYPGFPDIPTSNGLPRPWLVEFYNSKHIRIEGVLLTNSPMWDLGL 245
Query: 218 VYSSSVIVQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273
Y + VIV+G+ + +PNTDG++ T+ R+ I +GDD +A+KSG
Sbjct: 246 RYDTDVIVEGLRVYNNANDTTGAPNTDGVDLVGSTDVRLTHLDIDTGDDDIAMKSGLPGI 305
Query: 274 G--------IAYGMPTKQLIIRRLTCISPFSAV------IALGSEMSGGIQDVRAEDITA 319
AY P L LT + ++ +++GSE G+ + A DIT
Sbjct: 306 DPAVPGVPTFAYYKPPYNLPKLPLTHVHIANSTFKRGHGMSVGSETVNGVSHIHAHDITF 365
Query: 320 IDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNN-------YDPH 372
+ +++G RIKT RG + D+ + R+TM + I+ Y + P + P
Sbjct: 366 LGTDNGFRIKTGRDRGNDISDMKIERLTMTDVTTPISISEYYPTIPSATQGDLSQPHIPA 425
Query: 373 ALPVIQNINYRDMVAEN-------VTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQW 425
P + +I D+ A N VT + G+ P I ++ V+I N +
Sbjct: 426 TQPHVHDITISDLTATNPKTVRNVVTTGGLIIGLPESPVLKIALNRVSITSANA-SGIFM 484
Query: 426 NCTDITGIS 434
+ITG++
Sbjct: 485 RLRNITGLT 493
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 173/353 (49%), Gaps = 18/353 (5%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++E+G G+G S T + I+ + GG + +P G++L+G+ L +
Sbjct: 92 NIKEYGVKGNGY-SETATLQRIINEAAH---NGGGTIVIPAGEYLSGALFFPRGVDLRIE 147
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
K+A L+++ D E+PVI P+ G + R+ + +D V G IDG+G
Sbjct: 148 KNAKLISTVDPNEFPVI---PTRFEGIEK---RWRCAFLNFDHSDGVKVYGEGVIDGKG- 200
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233
+ W+K G RP L+ +IS L +IN SW +H +Y++ + GI I A
Sbjct: 201 VEWKKIPFG--NSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRAL 258
Query: 234 VTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293
P++DGI+ DS + I I + DDC+++KSG D+ G G P++ ++I
Sbjct: 259 EYIPSSDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAY 318
Query: 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSE--SGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
V A+GSE+SG I++V +D+E S +R K+ RGG V+++ + +K
Sbjct: 319 GHGGV-AMGSEISGDIRNVTIRS-CLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGA 376
Query: 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPF 404
+ F I + P + L ++NI+++++ E A + G PF
Sbjct: 377 RSIFDINMEWRMVPPLLPAHYPLTCLRNIHFKNINGE-AQSAGTMYGFKEAPF 428
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 55/329 (16%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFL 112
S+ ++G VGDG T++ A ++AID + + GG ++ + G + + S L S+ L L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACN---AAGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 113 HKDAVLLASQDEKEW---------------------PVIEPLPSYGRGRDTEGGRYSSLI 151
+ A+L A D + PV +P ++ +D +
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDAD-------- 112
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRK----FRAGELKYTRPYLIEIMYSQNIQISNLTL 207
+ ITG G +DG + ++ + G+ Y RP ++ + + +I ++TL
Sbjct: 113 ------NFSITGQ-GAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHDVTL 164
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
NSP W +HP + V++ I +L P+ N+DGI+PD TN RI C++ DDC+ +K
Sbjct: 165 QNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLK 224
Query: 268 --SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+G ++YG PTK +II T ++ SA I +G+E +++ ++ S G
Sbjct: 225 TTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGSNRG 278
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ I+ + GG V++V + ++T ++A
Sbjct: 279 LSIQ--IRDGGCVRNVSFSNIMIETRRFA 305
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 158/334 (47%), Gaps = 43/334 (12%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+ +FG V G +NT+A AAID ++ GG ++ VP G WLTG + S+ L L
Sbjct: 45 KITDFGAVPGGEVNNTQAIAAAIDACNK---AGGGRVVVPAGTWLTGPVHFKSNVNLCLE 101
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRG-RDTEGGRYSSLIFGTNLTDVVITGDNGTID--- 169
++AVL + + +++ LP+ E YS L++ +V I+G GT+
Sbjct: 102 ENAVLSFTDNPEDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAISG-KGTLQPKM 155
Query: 170 GQGELWW-------------------------RKFRAGELKYTRPYLIEIMYSQNIQISN 204
G ++W+ R+ GE + RP+LI +N+ +
Sbjct: 156 GTWKVWFKRPAPHLEALKDLYTKASTNVPVIERQMAVGE-NHLRPHLIHFNRCKNVMLDG 214
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 215 FKIRESPFWTIHLYMCDGGMVRNLDVRA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAV 272
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 273 VIKAGRNQDAWRLNTPCENIVIRNCRILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVM 331
Query: 325 GV-RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWI 357
+ +KT RGGF++++Y++ + T + I
Sbjct: 332 RLFFVKTNHRRGGFIENIYMKNVEAGTAQRVLEI 365
>gi|294777281|ref|ZP_06742736.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448901|gb|EFG17446.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 494
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTRLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS++ +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASENIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S++I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADHVR 359
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 196/436 (44%), Gaps = 50/436 (11%)
Query: 15 IILLVGIIISLNTNGVESRKARNSDWFEYSAI-SC--RAHSASLEEFGGVGDGTTSNTKA 71
+IL + S NT GV + + F I C S+ ++G V G NT+A
Sbjct: 13 VILSCILFSSCNTQGVTFKSVQVQAPFPMEPIKECIFPERDFSIVDYGAVEGGKQKNTEA 72
Query: 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIE 131
AID ++ GG ++ +P G+WLTGS + S+ L L ++A++ + D ++
Sbjct: 73 IAKAIDACNK---AGGGRVVIPAGEWLTGSIHFKSNVNLHLAENAIVRFTDDPADY---- 125
Query: 132 PLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELW--WRKFRAGELK--- 185
LP+ + E YS L++ ++ ITG G + LW W K ++
Sbjct: 126 -LPAVMTSWEGMECYNYSPLLYAFECENIAITG-KGLLKPHMGLWKVWFKRPPAHMEALK 183
Query: 186 --YT--------------------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
YT RP+LI+ +N+ + + SP W +H
Sbjct: 184 ELYTMASTDVPVEQRQMAKGENNLRPHLIQFNRCKNVLLDGFHIEESPFWTIHMYLVDGG 243
Query: 224 IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283
I + + + A N DGI+ + N IEDC GDD V +KSG +Q PT+
Sbjct: 244 IARNLNVKA--MGHNNDGIDLEMTRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTEN 301
Query: 284 LIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV-RIKTAVGRGGFVKDVY 342
+++R ++ ++ +GSE+SGG++++ D A ++ + IKT RG FV++VY
Sbjct: 302 IVVRNCLVLAG-QTLLGVGSEISGGVRNIYMHDCEAPNNVHRLFFIKTNHRRGAFVENVY 360
Query: 343 VRRM----TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398
+ ++ T++ M+ + + + Y+ + I+NI+ D+ ++ M L+G
Sbjct: 361 MEKIKTGATLRVMEIDMNVLYQWRTLVP-TYEER-ITRIENIHMIDIDCKSAKMIYDLKG 418
Query: 399 IAGDPFTGICISNVTI 414
P I + N+ +
Sbjct: 419 DHKLPVKDIELRNIHV 434
>gi|383816572|ref|ZP_09971967.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
gi|383294566|gb|EIC82905.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
Length = 415
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 164/354 (46%), Gaps = 61/354 (17%)
Query: 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKE 126
++ + +AAIDH G+ + G +++G + S +L++ AVL AS D
Sbjct: 55 ADQQRIQAAIDHCP-----SGAAVRFSKGGFISGPLVIRSGVSLWIDSGAVLAASNDPHS 109
Query: 127 WPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--------ELWWRK 178
+ + L GR +G R G N ITGD G IDG+G E WW+
Sbjct: 110 YDRGKGLCGTLAGR-GDGCRPFITFEGNNGGG--ITGD-GEIDGRGGQLMKGRNESWWQL 165
Query: 179 FRAGELKYTR---PYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT 235
R + ++ R P LIEI +++N+ + L+NSP++++ + + V G+TI AP T
Sbjct: 166 ARRAQKEHRRQNTPRLIEIEHARNLVFYRIRLVNSPNFHMAMNHVEGITVWGVTINAPAT 225
Query: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295
+ NTDGI+P + T+ I I +GDD VA+K+G C S F
Sbjct: 226 ARNTDGIDPGAATDVTIAHSIISTGDDDVAIKAG-------------------SGCGSRF 266
Query: 296 SAVI----------ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345
++I ++GSE S G+ DV +T + SG+RIK+ V RGG V ++
Sbjct: 267 ISIIDNHFYAGHGMSIGSETSAGVSDVLVNGLTLDGTTSGLRIKSDVSRGGLVNNLDFEN 326
Query: 346 MTMKTMKWAFWITGSYGSHPDNNYDPHA----LPVIQNINYRDMVAENVTMAAR 395
+T+ +W D YDP A +P QNI ++ + M R
Sbjct: 327 ITLHHNRWPINF--------DTRYDPDAKGNLIPQFQNITLVNIRGGSGVMIMR 372
>gi|423315477|ref|ZP_17293405.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
gi|392679280|gb|EIY72666.1| hypothetical protein HMPREF1058_04017 [Bacteroides vulgatus
CL09T03C04]
Length = 494
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTRLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS++ +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASENIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S++I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I V P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNVGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADHVR 359
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 183/384 (47%), Gaps = 38/384 (9%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFLHKD 115
+FG D T + A +AAID S+ GG ++ + GK + +GS L + L L +
Sbjct: 7 DFGAKADRVTDDAPAIQAAIDVCSK---AGGGRVVLEGGKHFYSGSIILKENVDLHLERG 63
Query: 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSS---------LIFGTNLTDVVITGDNG 166
AVL A + + + P+ G+ RD R + I+ + ++ I+G+ G
Sbjct: 64 AVLQAHKALERYF----HPNAGQ-RDDGVERVGTPVTLKPSYVFIYAKDADNIAISGE-G 117
Query: 167 TIDGQGELWWRK----FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS 222
IDG + R+ + G+ Y RP L+ + +I ++ + N+P W +HP
Sbjct: 118 AIDGNAYAFVRQVSPYYVTGDF-YPRPTLVYAEHCNHISFKDVIMRNAPFWTLHPAGCDD 176
Query: 223 VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK--SGWDQYGIAYGMP 280
V++ G+ IL + N+DGI+PD TN RI C++ DDC+ +K SG +YG P
Sbjct: 177 VLISGLRILNDLNVANSDGIDPDHSTNVRIIGCHVTCADDCICLKSSSGNMEYG-----P 231
Query: 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
K +II T S SA + +G+E +G ++V ++ DS G+ I+ + GG V++
Sbjct: 232 LKNVIISGCTLTST-SAALKIGTEGTGDFENVVVDNCIISDSNRGISIQ--IRDGGNVRN 288
Query: 341 VYVRRMTMKTMKWA--FWITGSYGSHPDNNYDPHALP-VIQNINYRDMVAENVTMAARLE 397
V + ++T ++A +W + ++ D H I N+ + ++ ++ L
Sbjct: 289 VSFSNIIIETRRFAECWWGCAEPITISTHDRDEHTKSGHISNVRFSNITCDSEN-GVFLS 347
Query: 398 GIAGDPFTGICISNVTIELTNKPK 421
G G+ I NV + + K K
Sbjct: 348 GSRGNHIEDILFENVRVVVRAKSK 371
>gi|440715734|ref|ZP_20896264.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
gi|436439283|gb|ELP32750.1| glycoside hydrolase family 28 [Rhodopirellula baltica SWK14]
Length = 497
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 25/345 (7%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
+++ +G +GDG +TKA + ID GG + VP G + G+ L S+ TL L
Sbjct: 52 NVKRYGAIGDGKAMDTKAVQETIDAC---HEAGGGVVRVPAGDFQIGTIVLKSNVTLSLD 108
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG- 172
A LL S + ++P IE L R G LI+ + ++ I G G IDG+G
Sbjct: 109 HGASLLGSTNVADYP-IENL------RRPREGAAHCLIYAEDAKNITIEG-LGVIDGRGT 160
Query: 173 -ELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231
E + RK R G+ RP L+ + +++ S +T W +H + ++ +T+
Sbjct: 161 HEFFPRKRRGGKNSGIRPRLMRMESCEDLTFSGVTYKRPAFWGLHLIDCKNIHFSAVTLR 220
Query: 232 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291
+ N DG++ D C N IE+C + +GDD + +KS + P + +++R
Sbjct: 221 FRNNNYNNDGLDLDGCENVLIENCDLSTGDDAICLKSSMN--------PCRNIVVRGCRA 272
Query: 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351
S +A + GS GG D+ + D G IK GG ++++ + R+ MK +
Sbjct: 273 DSN-TAAVKFGSSSRGGFLDISITNCYFHDCPMGA-IKLQSVDGGRLENITISRVVMKDV 330
Query: 352 KWAFWIT-GSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAAR 395
++ G+ GSH + + ++NI D+VAE VT+ R
Sbjct: 331 GSPIFLRLGNRGSHFGDGPADAPVGTLKNIRISDVVAE-VTIENR 374
>gi|150002789|ref|YP_001297533.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149931213|gb|ABR37911.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 494
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 57 EFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDA 116
++G D T +T A + AID R GG + V PG + G+ L S+ L L++
Sbjct: 59 DYGLKNDSTRLSTAALQKAIDECHR---SGGGTVEVAPGYYRIGAIYLKSNVNLHLNQGT 115
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
L+AS++ +P + R E S++I + + I+G GT+D +G+++W
Sbjct: 116 TLIASENIDLYPEMRS-----RVAGIEMVWPSAVINILDAENAAISGA-GTLDCRGKIFW 169
Query: 177 RKFRAGELKYTRPYL-------------IEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223
K+ Y + L + I S++I + + TL+ + W +YS
Sbjct: 170 DKYWTMRKDYEKRKLRWIVDYDCKRVRGMLISNSRHITLKDFTLMRTGFWGCQVLYSDQC 229
Query: 224 IVQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPT 281
+ G+ I + P+TDGI+ DS TN IE+C + DD + +K+G D G+ PT
Sbjct: 230 TLNGLKINNNIGGHGPSTDGIDIDSSTNILIENCEVDCNDDNICLKAGRDADGLRVNRPT 289
Query: 282 KQLIIRRLTCISPFSA-VIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKD 340
+ +I+R CI+ A +I GSE SG I++V ++ A + S +R+K+A+ RGG V++
Sbjct: 290 ENIIVR--GCIARKGAGLITCGSETSGCIRNVLGYNLQAYGTSSTLRLKSAMNRGGTVEN 347
Query: 341 VYVRRMTMKTMK 352
+Y+ ++T ++
Sbjct: 348 IYMTQVTADHVR 359
>gi|355672899|ref|ZP_09058620.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
gi|354814926|gb|EHE99524.1| hypothetical protein HMPREF9469_01657 [Clostridium citroniae
WAL-17108]
Length = 442
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 160/319 (50%), Gaps = 31/319 (9%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFNLTSHFTLFL 112
++ ++G GDG + + A + AID S GG ++ +P G +++GS L S+ L++
Sbjct: 4 NVRDYGAAGDGASKDRNAIQKAIDACS---EAGGGRVVLPGGGTYMSGSLVLRSNVELYV 60
Query: 113 HKDAVLLASQDEKEWPVIEP------------LPSYGRGRDTEGGRYSSLIFGTNLTDVV 160
AVL AS D ++ ++P LPSY RY I+G ++
Sbjct: 61 ESGAVLKASTDPSDYQPLDPQDPEGSVEHEESLPSYINCEYDGKPRYY-FIYGRGGENIR 119
Query: 161 ITGDNGTIDGQGELWWRK---FRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHP 217
ITG GTIDG E+++ K + Y R +I + +++ + ++TL W +H
Sbjct: 120 ITG-FGTIDGSEEIYYGKQIRYHIEGAYYPRIPMILMEDVEHLTVRDVTLTRCAFWTLHM 178
Query: 218 VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS--GWDQYGI 275
V+V + IL + N DGI+PD C + RI +C++ DDC+ +K+ G+++YG
Sbjct: 179 AGCRDVLVDSVRILNNLRMANCDGIDPDHCQDVRIVNCHVECADDCIVLKNTKGFEKYG- 237
Query: 276 AYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335
P K ++I T IS SAV +G+E +++ E+ + G+ + +
Sbjct: 238 ----PCKNILISGCTLISTSSAV-KIGTESEDDFENIIIENCCISRTNRGISLH--LRDK 290
Query: 336 GFVKDVYVRRMTMKTMKWA 354
G +++V V +T++T +++
Sbjct: 291 GNIRNVLVSNVTIETRRFS 309
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 59/387 (15%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+++FG + + +T NT + AID + GG + +PPG +L G S +
Sbjct: 40 SIKDFGAIANNSTDNTGVIQQAIDAADK---AGGGTVIIPPGIYLCGPLQFKSSLNFRID 96
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL + P+ Y G T+ G + I G+ L DV ITG +GTIDGQG
Sbjct: 97 SGAVLR----------LLPMDRYPGG--TKSG--TDFISGSKLHDVAITG-SGTIDGQGA 141
Query: 174 LWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNV--HPVYSSSVIVQGITIL 231
WW ++ +K RP +I + + + I +TL+N+P +++ +++V V +T+
Sbjct: 142 PWWPAYKDKGVK--RPRMIALQNCERLLIRGVTLMNAPMFHIAISGKATNNVTVDKVTVR 199
Query: 232 APVTS-PNTDGINPDSC----TNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLII 286
AP + P N D+C I+DC I +GDD G I
Sbjct: 200 APASDDPLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGGTSNVHIQ---------- 249
Query: 287 RRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346
C + +++GS GG+ + ED + ++E G+RIK+ RGG V+++ R +
Sbjct: 250 ---NCKYGYGHGLSIGSYTKGGVSNFLIEDCSFTNTECGIRIKSDRDRGGVVQNLTYRNI 306
Query: 347 TMKTMKWAFWITGSYGSHPDNNYDPHAL-----------------PVIQNINYRDMVA-- 387
M+ + I G+Y + + + PV ++I + ++ A
Sbjct: 307 KMENVGMPILIYGAYMAKEKEFRNLQKITPEIAAGYAREPLTDLTPVYKDITFENITATT 366
Query: 388 ENVTMAARLEGIAGDPFTGICISNVTI 414
+N A + G+ P + I VTI
Sbjct: 367 QNGKRAGLIWGLPEAPASNIVFKKVTI 393
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 177/393 (45%), Gaps = 47/393 (11%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G G +NTKA AAI+ + GG ++ VP G WLTG + S+ L+L +
Sbjct: 54 ITDYGAKNGGEVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+A+L + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 111 NAILNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGE-NHLRPHLIHFNRCKNVLLDGF 223
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDFEMSRNFLVEDCSFDQGDDAVV 281
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 340
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNIN--Y 382
+ +KT RGGF+++VY++ + T + I + + P I I+ Y
Sbjct: 341 LFFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEV-LYQWKDLVPTYEERITRIDGIY 399
Query: 383 RDMV-AENVTMAARLEGIAGDPFTGICISNVTI 414
D V E+ L+G A P + I NV +
Sbjct: 400 MDKVTCESADAIYELKGDAKLPVKNVTIKNVKV 432
>gi|291615877|ref|YP_003518619.1| Pgl [Pantoea ananatis LMG 20103]
gi|378769045|ref|YP_005197520.1| polygalacturonase [Pantoea ananatis LMG 5342]
gi|386018057|ref|YP_005936358.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|386081132|ref|YP_005994657.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|291150907|gb|ADD75491.1| Pgl [Pantoea ananatis LMG 20103]
gi|327396140|dbj|BAK13562.1| polygalacturonase Pgl [Pantoea ananatis AJ13355]
gi|354990313|gb|AER34437.1| polygalacturonase Pgl [Pantoea ananatis PA13]
gi|365188533|emb|CCF11483.1| polygalacturonase [Pantoea ananatis LMG 5342]
Length = 443
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 35/310 (11%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +F V DG T +T+ + AID ++ + GG +L +PPG++ +G NL S F L L
Sbjct: 4 SLGDFHPVADGETPDTRILQQAIDQIA---AAGGGRLTLPPGRYRSGCLNLPSDFELHLE 60
Query: 114 KDAVLLASQ---DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
AVL+AS+ D ++W + ++ L++ ++ ITG G I+G
Sbjct: 61 AGAVLVASRHLADYQQWKALS----------CAEKSHNVLLYALGQRNLTITG-QGHIEG 109
Query: 171 QGELWW------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
E W+ + +R K RP +I + +++ +++LI +P W VH V V
Sbjct: 110 DAEAWFAAEPDEQGYRVP--KADRPRMIVFEDCEQVRLQDISLIRAPMWTVHLVSCRHVH 167
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284
++ +TI +T PNTD ++ DSC I + Y + DD + +K+ + G+ P +++
Sbjct: 168 IERLTIDNAMTLPNTDALDIDSCEAVFISNSYFSAADDAICIKTTFKPAGLR--RPARRI 225
Query: 285 IIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344
+ S S + +G+E I+D+ T DS G+ I V R G +R
Sbjct: 226 AVSNCLLRSD-SCALKIGTETWDDIEDITVSGCTLFDSNRGIGI---VSRDGGA----IR 277
Query: 345 RMTMKTMKWA 354
R+ T+ ++
Sbjct: 278 RVLFSTIAFS 287
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 144/314 (45%), Gaps = 65/314 (20%)
Query: 177 RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
R F G Y RP ++E + N+ ++N N+P W HP S +V+++G+T +
Sbjct: 326 RIFGLGH--YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IG 381
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +PD+CT+ EDC +GDDC+A+KSG D+ YG P K+ +IR T S
Sbjct: 382 PNNDGFDPDACTDVLCEDCTFNTGDDCIAIKSGKDR-DTEYG-PAKRHLIRNCTMNSGHG 439
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDS-------ESGVRIKTAVGRGGFVKDVYVRRMTMK 349
I LGSEM GG++ + A +++ +++ +R+KT + RGG+VKD +V+ +T+
Sbjct: 440 G-ITLGSEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLP 498
Query: 350 ---TMKWAFWITGSYGSHP---------------------------DNNYDPH------A 373
T+K + + P D +Y P
Sbjct: 499 NGLTLKGGGYGSALLAGSPINASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTR 558
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGI 433
PV+QN+ D+ A NVT L G+ F I + P +N T T
Sbjct: 559 APVVQNVTISDVKASNVT----LNGVTASCFQAI--------VAQGPVAFDYNGTPPTPA 606
Query: 434 S---SGVTPKPCEL 444
SGVT C+
Sbjct: 607 VQPISGVTISNCDF 620
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 184/396 (46%), Gaps = 50/396 (12%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117
+G GDG T +T+A +AA+D ++ +G + + PG + TG+ + S TL +
Sbjct: 35 YGAKGDGITLDTRAIQAALDAAAK---KGPATVTFAPGTYRTGALFVKSGTTLRIGAGVT 91
Query: 118 LLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWR 177
L A +P+I+ R + +++I DV ITG +GT+DG G+ WW
Sbjct: 92 LRAVHGLANYPLIKT-----RVAGIDMHWPAAVINVYRQHDVHITG-SGTVDGNGKYWWD 145
Query: 178 KFRAGELKY-------------TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
+ A +Y RP LIE SQ++ ++ L L+ SP W VH YS+ V
Sbjct: 146 GYWALRKQYDLRGLRWAADYDDRRPRLIEFYQSQHVSLAGLHLLRSPFWTVHICYSAYVH 205
Query: 225 VQGITILAPV--TSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTK 282
V GITI + P+TDG++ DS + +E I DD + +K+G D G+ P
Sbjct: 206 VDGITIRNNIGGRGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDV 265
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAVGRGGFVKDV 341
++IR T + +A +GSE SGG ++V +I A++ SGV K+A RGG+ ++
Sbjct: 266 DIVIRNCT-VRYGAAAFTIGSETSGGFRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNI 324
Query: 342 YVRRMTMKTMKWAFWITGSYGSHPDNNYD--PH--------------------ALPVIQN 379
+ + + IT ++ +P +Y PH LP +N
Sbjct: 325 RIHDFQLDGVAIPIHITMNW--NPSYSYAKIPHGLKHVPRYYRVLAKPVPPARGLPHFRN 382
Query: 380 INYRDMVAENVTMAARLEGIAGDPFTGICISNVTIE 415
++ ++ A N A + + P + ++ I+
Sbjct: 383 VHIWNIEATNAKRAFDVSAMPAAPLVRFKLDHIRIQ 418
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 130/266 (48%), Gaps = 52/266 (19%)
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
Y RP ++E + N+ ++N N+P W HP S +V+++G+T + PN DG +P
Sbjct: 334 HYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 391
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
D+CT+ EDC +GDDC+A+KSG D+ + YG P K+ +IR T S I LGSE
Sbjct: 392 DACTDVLCEDCTFNTGDDCIAIKSGKDR-DVEYG-PAKRHLIRNCTMNSGHGG-ITLGSE 448
Query: 305 MSGGIQDVRAEDITAIDS-------ESGVRIKTAVGRGGFVKDVYVRRMTMK---TMKWA 354
M GG++ + A +++ +++ +R+KT + RGG+VKD +V+ +T+ T+K
Sbjct: 449 MGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGG 508
Query: 355 FWITGSYGSHP---------------------------DNNYDPH------ALPVIQNIN 381
+ + P D +Y P PV+QN+
Sbjct: 509 GYGSALLAGSPVNASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNMT 568
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGI 407
D+ A NVT L G+ F I
Sbjct: 569 IADVKASNVT----LNGVTASCFQAI 590
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 32 SRKARNSDWFEYSAISCRAHSASLEEFGGV------------GDGTTSNTKAFKAAIDHL 79
+R+ R+ D Y A C A A + G + AF AAID
Sbjct: 85 ARRGRDFDVTHYGARPC-ATVAQTSPYPAAKSPVSPGAELTAAPGAFDSRPAFLAAIDAC 143
Query: 80 SRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS--- 135
R EGG ++ VPPG W G L S+ T L + + S + ++ P+
Sbjct: 144 RR---EGGGRVVVPPGNWYCAGPIVLQSNVTFHLSANCTIYFSPNPADYAKDGPVDCGAN 200
Query: 136 ----YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT--IDGQ 171
Y R + + Y + ++ N T++ +TG+ T ++GQ
Sbjct: 201 GRLYYSRWQANDCLNYGAPVYARNATNIALTGEGPTSVLNGQ 242
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 54/274 (19%)
Query: 177 RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236
R F G Y RP ++E + N+ ++N N+P W HP S +V+++G+T +
Sbjct: 326 RIFGLGH--YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IG 381
Query: 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296
PN DG +PD+CT+ EDC +GDDC+A+KSG D+ YG P K+ +IR T S
Sbjct: 382 PNNDGFDPDACTDVLCEDCTFNTGDDCIAIKSGKDR-DTEYG-PAKRHLIRNCTMNSGHG 439
Query: 297 AVIALGSEMSGGIQDVRAEDITAIDS-------ESGVRIKTAVGRGGFVKDVYVRRMTMK 349
I LGSEM GG++ + A +++ +++ +R+KT + RGG+VKD +V+ +T+
Sbjct: 440 G-ITLGSEMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLP 498
Query: 350 ---TMKWAFWITGSYGSHP---------------------------DNNYDPH------A 373
T+K + + P D +Y P
Sbjct: 499 NGLTLKGGGYGSALLAGSPINASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTR 558
Query: 374 LPVIQNINYRDMVAENVTMAARLEGIAGDPFTGI 407
PV+QN+ D+ A NVT L G+ F I
Sbjct: 559 APVVQNVTISDVKASNVT----LNGVTASCFQAI 588
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 32 SRKARNSDWFEYSAISCRA------HSASLEEFGGVGDGTTS-----NTKAFKAAIDHLS 80
+R+ R+ D Y A C + A+ D TT+ + AF AAID
Sbjct: 83 ARRGRDFDVTHYGARPCATVAQTSPYPAAKSPVSPGSDLTTAPGAFDSRPAFLAAIDACR 142
Query: 81 RFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS---- 135
R EGG ++ VP G W G L S+ T L + + S + ++ P+
Sbjct: 143 R---EGGGRVVVPSGNWYCAGPIVLQSNVTFHLSANCTIYFSPNPADYAKDGPVDCGANG 199
Query: 136 ---YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT--IDGQ 171
Y R + + Y + ++ N T++ +TG+ T ++GQ
Sbjct: 200 RLYYSRWQANDCLNYGAPVYARNATNIALTGEGPTSVLNGQ 240
>gi|295132878|ref|YP_003583554.1| glycoside hydrolase [Zunongwangia profunda SM-A87]
gi|294980893|gb|ADF51358.1| glycoside hydrolase family protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 30/312 (9%)
Query: 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLF 111
A++++FG V D T+N+ + + ID+ + GG ++ +P GK +L+G FNL S+ L
Sbjct: 4 ANIQDFGAVNDDFTNNSVSIQKTIDYCAAL---GGGKVVIPAGKPYLSGPFNLKSNIELH 60
Query: 112 LHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQ 171
L AVL A DE + + G G + I G NL + ITG GT+DG
Sbjct: 61 LEHGAVLKAYPDESVYTKSAFRQNMGEG--------TIWIGGENLNQISITG-GGTLDGN 111
Query: 172 GELWW-------RKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224
G + + + E RP+++ ++ +NI++ +T+ N+ W +H + V
Sbjct: 112 GIFFMGDELHDSYELKPFETIDPRPHMLTLVSCKNIKMYGVTVSNAAYWALHFIGCYDVA 171
Query: 225 VQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS--GWDQYGIAYGMPTK 282
++ I++ + N+DGI+ D C N RI +C+I SGDDC+ +K+ +++ G P +
Sbjct: 172 IENISLYNDLKVRNSDGIDLDHCQNIRISNCHIESGDDCICLKNRREYEELG-----PCR 226
Query: 283 QLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVY 342
++I T IS S I +GSE I V + S G+ I+ G V D+
Sbjct: 227 NIVISNCTLIST-SCAIKIGSENMDSISHVTFNNCIITGSCRGIGIQNR--DEGTVSDII 283
Query: 343 VRRMTMKTMKWA 354
+ ++ +++
Sbjct: 284 FSNIMVECKQFS 295
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 160/329 (48%), Gaps = 55/329 (16%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHFTLFL 112
S+ ++G VGDG T++ A ++AID + + GG ++ + G + + S L S+ L L
Sbjct: 4 SVTKYGAVGDGATNDAAAIQSAIDACN---AAGGGRVVLEGGHTYYSSSIELKSNVELHL 60
Query: 113 HKDAVLLASQDEKEW---------------------PVIEPLPSYGRGRDTEGGRYSSLI 151
+ A+L A D + PV +P ++ +D +
Sbjct: 61 EQGALLKAHSDISTYFNPNGDDASVAAVSGAKAVDRPVAKPAYTFIHAKDAD-------- 112
Query: 152 FGTNLTDVVITGDNGTIDGQGELWWRK----FRAGELKYTRPYLIEIMYSQNIQISNLTL 207
+ ITG G +DG + ++ + G+ Y RP ++ + + +I ++TL
Sbjct: 113 ------NFSITGQ-GAVDGNVYAFMKRASRYYFNGDF-YPRPTMVYVEHCNHISFHDVTL 164
Query: 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267
NSP W +HP + V++ I +L P+ N+DGI+PD TN RI C++ DDC+ +K
Sbjct: 165 QNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHVQCADDCICLK 224
Query: 268 --SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+G ++YG PTK +II T ++ SA I +G+E +++ ++ + G
Sbjct: 225 TTAGNNEYG-----PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNCIITGTNRG 278
Query: 326 VRIKTAVGRGGFVKDVYVRRMTMKTMKWA 354
+ I+ + GG V++V + ++T ++A
Sbjct: 279 LSIQ--IRDGGCVRNVSFSNIMIETRRFA 305
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 129/266 (48%), Gaps = 52/266 (19%)
Query: 185 KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINP 244
Y RP ++E + N+ ++N N+P W HP S +V+++G+T + PN DG +P
Sbjct: 332 HYLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 245 DSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE 304
D+CT+ EDC +GDDC+A+KSG D+ YG P K+ +IR T S I LGSE
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDR-DTEYG-PAKRHLIRNCTMNSGHGG-ITLGSE 446
Query: 305 MSGGIQDVRAEDITAIDS-------ESGVRIKTAVGRGGFVKDVYVRRMTMK---TMKWA 354
M GG++ + A +++ +++ VR+KT + RGG+VKD +V+ +T+ T+K
Sbjct: 447 MGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTLPNGVTLKGG 506
Query: 355 FWITGSYGSHP---------------------------DNNYDPH------ALPVIQNIN 381
+ + P D +Y P PV+QN+
Sbjct: 507 GYGSALLAGSPVNASVPLGVVTPSAGNPSAAQGGIVTFDCDYQPANDAVRTRAPVVQNVT 566
Query: 382 YRDMVAENVTMAARLEGIAGDPFTGI 407
D+ A NVT L G+ F I
Sbjct: 567 IADVKASNVT----LNGVTASCFQAI 588
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 32 SRKARNSDWFEYSAISCRAHSASLEEFGGV------------GDGTTSNTKAFKAAIDHL 79
+R+ R+ D Y A C A A + G + AF AAID
Sbjct: 83 ARRGRDFDVTHYGARPC-ATVAQTSPYPAAKSPVSPGSELTTAPGAFDSRPAFLAAIDAC 141
Query: 80 SRFQSEGGSQLFVPPGKW-LTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPS--- 135
R EGG ++ VPPG W G L S+ T L + + S + ++ P+
Sbjct: 142 RR---EGGGRVVVPPGNWYCAGPIVLQSNVTFHLSANCTIYFSPNPADYAKDGPVDCGAN 198
Query: 136 ----YGRGRDTEGGRYSSLIFGTNLTDVVITGDNGT--IDGQ 171
Y R + + Y + ++ N T++ +TG+ T ++GQ
Sbjct: 199 GRLYYSRWQANDCLNYGAPVYARNATNIALTGEGPTSVLNGQ 240
>gi|381405974|ref|ZP_09930658.1| polygalacturonase [Pantoea sp. Sc1]
gi|380739173|gb|EIC00237.1| polygalacturonase [Pantoea sp. Sc1]
Length = 443
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
SL +F DG T +T + A+D ++ + GG +L +P G++ +G NL S L L
Sbjct: 4 SLADFHPAADGETPDTAVLQRALDQIA---AAGGGRLTLPAGRYRSGCLNLPSDIELHLD 60
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
AVL+ASQ ++ ++ L + ++ L++ ++ ++G G IDG+G+
Sbjct: 61 AGAVLIASQQLADYQTVQALSCAEKS-------HNVLLYALGQRNITLSG-TGRIDGEGD 112
Query: 174 LWWRKFRAGE---LKYT-RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGIT 229
W+ R + L + RP LI + + ++ TL+ +P W VH V V + +T
Sbjct: 113 AWFAAERDAQGYRLPHADRPRLIVFEDCEQVTLTGFTLVQAPMWTVHLVSCRHVHIDHLT 172
Query: 230 ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289
I +T PNTD ++ DSC + + Y + DD + +K+ A P +Q++I
Sbjct: 173 IDNAMTMPNTDALDIDSCEAVFVSNSYFSAADDAICIKT--THKPAALRRPARQIMITNC 230
Query: 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349
S +S + +G+E ++DV T DS G+ I + G +RR+
Sbjct: 231 LLRS-YSCALKIGTETWDDVEDVTVTGCTIFDSNRGIGILSRDGGA-------MRRLLFS 282
Query: 350 TMKWA 354
+ +A
Sbjct: 283 NLTFA 287
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 153/322 (47%), Gaps = 43/322 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ ++G G +NTKA AAI+ + GG ++ VP G WLTG + S+ L+L +
Sbjct: 54 ITDYGAKNGGKVNNTKAIAAAIEACHK---SGGGRVVVPAGIWLTGPIHFKSNVNLYLEE 110
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+A+L + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 111 NAILNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 164
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 165 TWKVWFKRPQPHLEALKELYTKASTDVPVIERQMAVGE-NHLRPHLIHFNRCKNVLLDGF 223
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N DGI+ + N +EDC GDD V
Sbjct: 224 KIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDFEMSRNFLVEDCSFDQGDDAVV 281
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 282 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 340
Query: 326 V-RIKTAVGRGGFVKDVYVRRM 346
+ +KT RGGF+++VY++ +
Sbjct: 341 LFFVKTNHRRGGFIENVYMKNV 362
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 174/367 (47%), Gaps = 51/367 (13%)
Query: 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWP 128
TKA AI S +GG ++ +P G + T L S+ L L AVL + D +
Sbjct: 64 TKAINQAITECS---VQGGGKVIIPKGIYPTAPIRLKSNVNLHLADSAVLKFTTD---YN 117
Query: 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEL--WW-----RKFRA 181
+ + + + G D S LI+ ++ ITG NG +DGQ + W+ R
Sbjct: 118 LFDTVRTRLEGIDCYN--ISPLIYAYEEVNIAITG-NGIMDGQADRSNWFCDERIRGVVQ 174
Query: 182 GELKYT---------------------------RPYLIEIMYSQNIQISNLTLINSPSWN 214
+ K+T RP I + +NI + T+ +P W
Sbjct: 175 KDGKHTNEKTLLYEMKEDSVPFDKRVFSGKSSIRPQFINLYKCKNILLEGFTINRAPFWL 234
Query: 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYG 274
+HP+ S +V ++ + + + N DG +P+SC N IEDC +GDDC+A+KSG D+ G
Sbjct: 235 IHPLLSENVTIRKVKMQS--HGYNNDGCDPESCNNVLIEDCDFDTGDDCIAIKSGRDEDG 292
Query: 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED--ITAIDSESGVRIKTAV 332
+ +P++ +I+R + A +A+GSE++GG ++V E+ + + + + +RIK+
Sbjct: 293 RFWNIPSENIIVRNCR-MKDGHAGVAIGSEVTGGCRNVWVENCRMDSPELDRIIRIKSNA 351
Query: 333 GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM 392
RGG V++++VR + + K + I G + P+ LP NI +++++
Sbjct: 352 IRGGEVENLFVRNIFVGECKES--ILGIEMKYWRVEKGPY-LPYFHNIYLENIISKKSQY 408
Query: 393 AARLEGI 399
L+G
Sbjct: 409 VLHLDGF 415
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 43/328 (13%)
Query: 55 LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHK 114
+ +FG V G NTKA +AI+ ++ GG ++ VP G WLTG + S+ L+L +
Sbjct: 55 ITDFGAVNGGRVDNTKAITSAIEACNQ---SGGGRVVVPAGTWLTGPIHFKSNVNLYLEE 111
Query: 115 DAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE 173
+AVL + + ++ LP+ + E YS L++ +V ITG GT+ + +
Sbjct: 112 NAVLNFTDNPSDY-----LPAVMTSWEGLECYNYSPLLYAFECENVAITG-KGTLQPKMD 165
Query: 174 LW--W--------------------------RKFRAGELKYTRPYLIEIMYSQNIQISNL 205
W W R+ GE + RP+LI +N+ +
Sbjct: 166 TWKVWFKRPQPHLEALKELYAKASTNIPVIERQMAIGE-NHLRPHLIHFNRCKNVLLDGF 224
Query: 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265
+ SP W +H +V+ + + A N D I+ + N +EDC GDD V
Sbjct: 225 KIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDDIDFEMSRNFLVEDCSFDQGDDAVV 282
Query: 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325
+K+G +Q P + ++IR + + ++ +GSE+SGGI+++ D TA +S
Sbjct: 283 IKAGRNQDAWRLNTPCENIVIRNCQILKGHT-LLGIGSEISGGIRNIYMHDCTAPNSVMR 341
Query: 326 V-RIKTAVGRGGFVKDVYVRRMTMKTMK 352
+ +KT RGGF+++VY++ + T +
Sbjct: 342 LFFVKTNHRRGGFIENVYMKNVKAGTAQ 369
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 34/330 (10%)
Query: 58 FGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSFNLTSHFTLFLHKDA 116
+G DG T NT A AID + GG + VP G +LTG+ L S+ L L +
Sbjct: 65 YGAKNDGKTDNTAAIAKAIDAC---VAAGGGHVIVPGGGSFLTGAIRLKSNVDLHLEAGS 121
Query: 117 VLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWW 176
VL S D ++P + R E +S +I+ ++ +TG +GT+D W
Sbjct: 122 VLKFSGDAAKFPNV-----LTRYEGIECVNHSPMIYAYQEKNIGLTG-SGTLDAAATSSW 175
Query: 177 RKF--RA------------------GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVH 216
K RA G R +E +N+ I +TL NS W +H
Sbjct: 176 NKGSDRAYLETLVAKGTPPEKRVVPGSGHTMRSAFVEPYACENVLIQGITLKNSMFWQLH 235
Query: 217 PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276
P +V V G++ NTDG +P+SC + I +C + + DD +A+KSG D G
Sbjct: 236 PTLCRNVTVDGVSTDPSTAHSNTDGCDPESCDHVVIANCTLGAHDDNIAIKSGRDADGRR 295
Query: 277 YGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAI-DSESGVRIKTAVGR 334
+P + L++ + C+ + I GSE +GGI++V A +T D++ + +K+ R
Sbjct: 296 VNVPCQNLVV--VNCVMNGNWGAITCGSEQTGGIRNVYAYKLTVKGDTKFALYVKSNTLR 353
Query: 335 GGFVKDVYVRRMTMKTMKWAFWITGSYGSH 364
GGF +++ + ++ + ++T +Y S
Sbjct: 354 GGFSENINLDSVSGTFARNFVYVTSTYNSQ 383
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 62/420 (14%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS---FNLTSHFTL 110
++E++G VGDG +T+AF+ A + + + + L VP K + F L
Sbjct: 30 NVEQYGAVGDGKHDSTEAFETAWNAACK---KASAVLVVPANKKFFVNNLVFRGPCQPHL 86
Query: 111 FLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDG 170
D ++A D W + + + LTD + G G IDG
Sbjct: 87 SFKVDGTIVAQPDPARWKNSKIWLQFAQ-----------------LTDFNLMG-TGVIDG 128
Query: 171 QGELWWRKFRAGELKYT----------RPYLIEIMYSQNIQISNLTLINSPSWNVHPVYS 220
QG+ WW AG+ K RP I+I YS+++ + LTL+NSP +++
Sbjct: 129 QGQQWW----AGQCKVVNGRTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGEC 184
Query: 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280
V +QG+ I AP SPNTDGI+ + IE C I +GDDC+A+ +G
Sbjct: 185 EGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTG----------- 233
Query: 281 TKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFV 338
+ + I+ L C I +LG + S + V ID+++G+RIKT G G
Sbjct: 234 SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLA 293
Query: 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398
+ + M + I Y + + + IQ + Y+++ + T AA ++
Sbjct: 294 SYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAA-IQL 352
Query: 399 IAGD--PFTGICISNVTIELTN-KPKKLQWNCTD--ITGISSGVTPKPCE-LLPDHEPAQ 452
+ D P TGI +SNV+++LT+ KP +C D G SG C+ L P P +
Sbjct: 353 MCSDSVPCTGIQLSNVSLKLTSGKPA----SCVDKNARGFYSGRLIPTCKNLRPGPSPKE 408
>gi|393781089|ref|ZP_10369290.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
gi|392677424|gb|EIY70841.1| hypothetical protein HMPREF1071_00158 [Bacteroides salyersiae
CL02T12C01]
Length = 441
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 25/271 (9%)
Query: 15 IILLVGIIISLNTNGVESRKARNS--DWF---EYSAISCRAHSASLEEFGGVGDGTTSNT 69
I LL+ ISL + E DWF E I ++ E+G + D T T
Sbjct: 4 IALLLTAFISLQSFSEEKFPDGTPIPDWFRQNEVVNIQTLGKKYNILEYGVINDSTLLQT 63
Query: 70 KAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129
+ ++ ID S+ +GG + +P G +L+GS L+L +DAVL S D +P+
Sbjct: 64 EKIQSVIDQASQ---QGGGVIVIPKGTYLSGSLFFKPKTHLYLEEDAVLKGSDDISNFPI 120
Query: 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKF--------RA 181
I+ R +++L+ + I+G GTI+G G +W+ F +
Sbjct: 121 ID-----TRMEGQSLSYFAALVNADKVDGFTISG-KGTINGNGLRYWKSFWLRRKVIPKC 174
Query: 182 GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT---SPN 238
+ RP L+ I S ++QIS ++LINSP W H + V + + I +P T +P+
Sbjct: 175 TNMDELRPRLLYISNSNDVQISGVSLINSPFWTTHLYRCNRVKLLNLHIFSPATPVKAPS 234
Query: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269
TDGI+ D C+N +++CY+ DD +A+K G
Sbjct: 235 TDGIDIDVCSNVLVKNCYLSVNDDAIALKGG 265
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 43/329 (13%)
Query: 54 SLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLH 113
S+ +G V G T NTKA AI ++ GG ++ +P G+WLTG +L S+ L+L
Sbjct: 56 SIANYGAVKGGKTINTKAIAKAIKACNK---AGGGRVVIPAGEWLTGPVHLMSNVNLYLS 112
Query: 114 KDAVLLASQDEKEWPVIEPLPSYGRGRD-TEGGRYSSLIFGTNLTDVVITGDNGTIDGQG 172
A+L + + +++ LP+ + E YS L++ + +V ITG GT+
Sbjct: 113 DGAILRFTDNPEDY-----LPAVMTSWEGMECYNYSPLVYAFDCENVAITG-TGTLQPIM 166
Query: 173 ELWWRKFRA--------GELKYT--------------------RPYLIEIMYSQNIQISN 204
+ W + F+ EL YT RP+LI +N+ +
Sbjct: 167 DTWRKWFKRPKPHMDALAEL-YTMASTDVPVEKRQMAKGENNLRPHLIHFNRCKNVLLDQ 225
Query: 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264
+ SP W +H IV+ + + A N DG++ + N IEDC GDD V
Sbjct: 226 FKIRESPFWTIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEMSRNFLIEDCKFDQGDDAV 283
Query: 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324
+K+G +Q P + ++IR I + ++ +GSEMSGGI++V D A DS
Sbjct: 284 VIKAGRNQDAWRLDTPCENIVIRNCDIIKGHT-LLGIGSEMSGGIRNVYMHDCAAPDSVF 342
Query: 325 GVRI-KTAVGRGGFVKDVYVRRMTMKTMK 352
+ KT RGGF++++++ + M+
Sbjct: 343 RLFFAKTNHRRGGFIENIHMENVKAGKMQ 371
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,055,585,038
Number of Sequences: 23463169
Number of extensions: 358131761
Number of successful extensions: 748792
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 1625
Number of HSP's that attempted gapping in prelim test: 737294
Number of HSP's gapped (non-prelim): 5353
length of query: 480
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 334
effective length of database: 8,933,572,693
effective search space: 2983813279462
effective search space used: 2983813279462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)