Query 011659
Match_columns 480
No_of_seqs 307 out of 2212
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011659.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011659hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02793 Probable polygalactur 100.0 1.4E-72 2.9E-77 576.5 47.2 363 49-446 49-426 (443)
2 PLN02155 polygalacturonase 100.0 1.3E-71 2.8E-76 560.6 43.5 358 49-444 24-393 (394)
3 PLN02218 polygalacturonase ADP 100.0 7.5E-71 1.6E-75 561.0 44.4 354 48-443 63-431 (431)
4 PLN02188 polygalacturonase/gly 100.0 4.2E-71 9.1E-76 559.3 38.8 357 47-443 31-404 (404)
5 PLN03003 Probable polygalactur 100.0 1.3E-69 2.9E-74 549.4 43.5 361 49-448 20-394 (456)
6 PLN03010 polygalacturonase 100.0 1.2E-68 2.6E-73 539.9 45.5 348 49-444 43-404 (409)
7 PF00295 Glyco_hydro_28: Glyco 100.0 1.3E-53 2.8E-58 426.0 30.9 309 85-432 4-322 (326)
8 COG5434 PGU1 Endopygalactoruna 100.0 3E-47 6.6E-52 391.0 28.7 306 44-358 74-405 (542)
9 TIGR03808 RR_plus_rpt_1 twin-a 100.0 4.2E-27 9.2E-32 234.7 22.2 175 48-266 33-208 (455)
10 PLN03003 Probable polygalactur 99.9 3.5E-22 7.6E-27 203.6 28.4 252 190-475 105-390 (456)
11 PLN02793 Probable polygalactur 99.9 7.9E-22 1.7E-26 202.6 25.0 254 190-478 135-427 (443)
12 PLN03010 polygalacturonase 99.9 1.4E-21 3.1E-26 198.0 25.6 250 190-474 131-403 (409)
13 PLN02218 polygalacturonase ADP 99.9 7.9E-22 1.7E-26 201.7 22.1 240 191-469 149-428 (431)
14 PLN02155 polygalacturonase 99.9 3.9E-21 8.3E-26 194.5 23.8 250 191-475 108-393 (394)
15 PLN02188 polygalacturonase/gly 99.9 1.2E-20 2.6E-25 191.7 25.6 251 191-473 115-403 (404)
16 PF12708 Pectate_lyase_3: Pect 99.9 3.8E-21 8.3E-26 182.3 19.2 220 52-326 1-224 (225)
17 PF00295 Glyco_hydro_28: Glyco 99.8 6.3E-19 1.4E-23 176.3 22.9 198 189-418 51-284 (326)
18 PF03718 Glyco_hydro_49: Glyco 99.8 4.5E-17 9.8E-22 164.3 28.6 271 87-417 232-554 (582)
19 TIGR03805 beta_helix_1 paralle 99.6 1.3E-13 2.9E-18 136.8 26.4 37 72-113 1-39 (314)
20 COG5434 PGU1 Endopygalactoruna 99.5 1E-12 2.2E-17 136.4 16.3 151 211-390 237-398 (542)
21 TIGR03805 beta_helix_1 paralle 99.3 2.5E-10 5.4E-15 113.5 19.1 164 156-351 31-203 (314)
22 TIGR03808 RR_plus_rpt_1 twin-a 98.8 3.3E-07 7.1E-12 92.8 18.4 143 191-357 108-290 (455)
23 PF13229 Beta_helix: Right han 98.8 1E-07 2.2E-12 84.6 12.3 141 192-358 3-145 (158)
24 PF12541 DUF3737: Protein of u 98.7 2.5E-07 5.4E-12 86.6 13.2 121 194-356 94-230 (277)
25 PF03718 Glyco_hydro_49: Glyco 98.6 3.9E-06 8.4E-11 86.0 19.3 171 216-416 324-514 (582)
26 PF12541 DUF3737: Protein of u 98.6 4.6E-07 1E-11 84.8 11.5 101 192-328 131-231 (277)
27 PF13229 Beta_helix: Right han 98.5 2.1E-06 4.7E-11 75.9 12.5 122 190-331 24-147 (158)
28 PF05048 NosD: Periplasmic cop 98.4 8.3E-06 1.8E-10 78.0 14.6 134 192-356 16-150 (236)
29 PF05048 NosD: Periplasmic cop 98.4 1.4E-05 3E-10 76.5 15.6 115 191-329 37-152 (236)
30 PF07602 DUF1565: Protein of u 98.3 3.1E-05 6.8E-10 73.5 16.9 101 241-351 116-222 (246)
31 PLN02480 Probable pectinestera 98.3 0.00031 6.6E-09 70.3 24.0 132 194-350 128-276 (343)
32 PF14592 Chondroitinas_B: Chon 98.2 0.00041 8.9E-09 70.6 22.8 26 68-98 3-28 (425)
33 smart00656 Amb_all Amb_all dom 98.1 6.4E-05 1.4E-09 69.3 14.3 96 215-322 34-144 (190)
34 COG3866 PelB Pectate lyase [Ca 98.1 0.00013 2.9E-09 69.8 16.2 120 192-323 95-230 (345)
35 smart00656 Amb_all Amb_all dom 98.1 0.00019 4.1E-09 66.2 16.1 128 191-328 33-173 (190)
36 COG3866 PelB Pectate lyase [Ca 98.1 0.00024 5.2E-09 68.0 16.7 148 151-328 95-258 (345)
37 PRK10123 wcaM putative colanic 98.1 0.00034 7.3E-09 66.4 17.4 53 48-113 30-85 (464)
38 PF00544 Pec_lyase_C: Pectate 97.8 0.00015 3.2E-09 67.5 11.0 96 214-322 38-158 (200)
39 PLN02682 pectinesterase family 97.8 0.0053 1.1E-07 61.9 22.3 134 192-350 157-304 (369)
40 PF12708 Pectate_lyase_3: Pect 97.8 0.00086 1.9E-08 63.1 16.1 124 200-355 94-224 (225)
41 COG3420 NosD Nitrous oxidase a 97.8 0.0034 7.4E-08 61.1 18.6 156 85-292 32-191 (408)
42 PLN02634 probable pectinestera 97.7 0.013 2.9E-07 58.8 23.3 131 195-350 146-290 (359)
43 PLN02176 putative pectinestera 97.7 0.024 5.1E-07 56.7 24.8 130 196-350 120-270 (340)
44 PLN02773 pectinesterase 97.6 0.016 3.5E-07 57.5 21.9 133 193-350 97-239 (317)
45 PLN02497 probable pectinestera 97.5 0.032 7E-07 55.5 22.4 131 195-350 112-263 (331)
46 PRK10531 acyl-CoA thioesterase 97.5 0.063 1.4E-06 55.0 24.3 113 191-322 199-336 (422)
47 PLN02432 putative pectinestera 97.5 0.039 8.3E-07 54.2 21.9 132 194-350 90-229 (293)
48 PLN02170 probable pectinestera 97.4 0.028 6.1E-07 59.2 21.9 134 192-350 307-451 (529)
49 PLN02665 pectinesterase family 97.4 0.033 7.1E-07 56.3 21.3 135 192-350 148-297 (366)
50 PLN02708 Probable pectinestera 97.4 0.036 7.8E-07 59.3 22.4 110 193-322 325-449 (553)
51 PF01095 Pectinesterase: Pecti 97.4 0.006 1.3E-07 60.3 15.3 132 195-351 84-236 (298)
52 PF00544 Pec_lyase_C: Pectate 97.3 0.0021 4.5E-08 59.8 11.1 128 192-329 39-188 (200)
53 PLN02933 Probable pectinestera 97.3 0.038 8.1E-07 58.5 21.5 139 192-350 299-453 (530)
54 PLN02713 Probable pectinestera 97.3 0.042 9E-07 58.9 22.0 138 193-350 335-488 (566)
55 PLN02506 putative pectinestera 97.3 0.036 7.8E-07 58.9 21.4 134 192-350 313-458 (537)
56 PLN02201 probable pectinestera 97.3 0.054 1.2E-06 57.3 22.0 138 193-350 288-441 (520)
57 PLN02468 putative pectinestera 97.3 0.041 8.9E-07 59.0 21.4 137 194-350 341-489 (565)
58 PLN02217 probable pectinestera 97.3 0.035 7.5E-07 60.3 20.6 139 193-351 332-486 (670)
59 PLN02304 probable pectinestera 97.2 0.11 2.4E-06 52.6 22.7 43 68-112 86-131 (379)
60 PLN03043 Probable pectinestera 97.2 0.068 1.5E-06 57.0 21.6 139 192-350 307-461 (538)
61 PLN02301 pectinesterase/pectin 97.2 0.062 1.4E-06 57.3 21.1 139 192-350 317-471 (548)
62 PLN02671 pectinesterase 97.1 0.12 2.6E-06 52.0 21.8 133 193-350 149-294 (359)
63 PLN02916 pectinesterase family 97.1 0.11 2.3E-06 54.7 22.2 139 192-350 271-425 (502)
64 PLN02745 Putative pectinestera 97.1 0.085 1.8E-06 56.9 21.8 138 193-350 367-520 (596)
65 PLN02484 probable pectinestera 97.1 0.088 1.9E-06 56.7 21.8 139 192-350 354-508 (587)
66 PLN02995 Probable pectinestera 97.1 0.073 1.6E-06 56.8 20.3 136 195-350 309-460 (539)
67 PLN02313 Pectinesterase/pectin 97.1 0.094 2E-06 56.6 21.3 138 193-350 357-510 (587)
68 PLN02314 pectinesterase 97.0 0.078 1.7E-06 57.2 20.6 137 193-350 360-508 (586)
69 COG3420 NosD Nitrous oxidase a 97.0 0.025 5.3E-07 55.4 14.7 97 187-301 148-244 (408)
70 PLN02197 pectinesterase 97.0 0.11 2.4E-06 55.8 21.2 138 193-350 359-513 (588)
71 PLN02416 probable pectinestera 97.0 0.1 2.2E-06 55.7 20.7 137 194-350 313-465 (541)
72 PLN02488 probable pectinestera 96.9 0.23 5E-06 52.1 21.8 137 194-350 280-432 (509)
73 PLN02990 Probable pectinestera 96.8 0.11 2.5E-06 55.7 19.4 137 194-350 343-495 (572)
74 PF01696 Adeno_E1B_55K: Adenov 96.7 0.2 4.4E-06 50.5 19.0 54 53-121 44-99 (386)
75 PF12218 End_N_terminal: N ter 96.7 0.0023 5E-08 46.1 3.6 37 60-102 1-38 (67)
76 COG4677 PemB Pectin methyleste 95.9 2 4.4E-05 42.1 20.2 139 193-350 184-350 (405)
77 PF01696 Adeno_E1B_55K: Adenov 95.8 1.7 3.8E-05 44.0 20.0 83 221-326 121-204 (386)
78 PRK10123 wcaM putative colanic 95.4 2.2 4.7E-05 41.1 17.9 56 198-258 151-213 (464)
79 PF09251 PhageP22-tail: Salmon 94.7 3.2 6.9E-05 42.2 17.7 65 281-347 263-346 (549)
80 PF07602 DUF1565: Protein of u 94.5 0.46 1E-05 45.4 11.2 73 282-358 122-195 (246)
81 PF03211 Pectate_lyase: Pectat 93.5 2.4 5.3E-05 39.5 13.6 129 222-384 62-194 (215)
82 TIGR03804 para_beta_helix para 92.1 0.18 3.9E-06 34.4 3.1 39 215-258 2-40 (44)
83 PF03211 Pectate_lyase: Pectat 92.1 6 0.00013 37.0 14.0 130 196-345 59-194 (215)
84 TIGR03804 para_beta_helix para 91.6 0.34 7.3E-06 33.0 4.1 41 241-293 1-41 (44)
85 PF08480 Disaggr_assoc: Disagg 90.6 5.4 0.00012 36.1 11.5 103 198-323 2-110 (198)
86 PLN02773 pectinesterase 90.1 7.6 0.00017 38.7 13.5 113 216-352 97-213 (317)
87 PF14592 Chondroitinas_B: Chon 87.1 3.7 7.9E-05 42.4 9.2 23 308-330 308-330 (425)
88 PLN02480 Probable pectinestera 87.1 31 0.00066 34.9 15.6 113 216-351 127-252 (343)
89 PLN02698 Probable pectinestera 84.8 23 0.0005 37.7 14.2 61 196-262 268-333 (497)
90 PF08480 Disaggr_assoc: Disagg 83.6 6.6 0.00014 35.5 8.0 73 282-354 2-79 (198)
91 PLN02682 pectinesterase family 83.2 29 0.00062 35.4 13.5 113 217-351 159-280 (369)
92 PLN02170 probable pectinestera 82.8 33 0.00071 36.7 14.2 117 215-352 307-428 (529)
93 PLN02665 pectinesterase family 82.1 37 0.00081 34.6 13.8 115 216-352 149-273 (366)
94 PLN02698 Probable pectinestera 81.5 22 0.00048 37.8 12.5 116 216-352 265-386 (497)
95 PLN02708 Probable pectinestera 80.3 30 0.00065 37.4 13.1 114 217-352 326-450 (553)
96 PLN02634 probable pectinestera 79.0 37 0.00081 34.4 12.5 111 219-351 147-266 (359)
97 PLN02432 putative pectinestera 78.4 50 0.0011 32.6 13.0 109 218-350 91-204 (293)
98 PLN02416 probable pectinestera 78.1 49 0.0011 35.6 13.9 114 218-352 314-433 (541)
99 PLN02217 probable pectinestera 77.5 34 0.00074 37.7 12.6 113 218-352 334-453 (670)
100 PLN02916 pectinesterase family 77.1 51 0.0011 35.0 13.4 114 217-352 273-393 (502)
101 PLN02313 Pectinesterase/pectin 76.9 47 0.001 36.2 13.4 114 218-352 359-478 (587)
102 PLN02671 pectinesterase 76.6 54 0.0012 33.3 12.9 112 218-351 151-270 (359)
103 PLN02745 Putative pectinestera 76.3 63 0.0014 35.3 14.2 115 217-352 368-488 (596)
104 PLN02506 putative pectinestera 75.7 41 0.00089 36.2 12.5 115 216-351 314-434 (537)
105 PLN02933 Probable pectinestera 75.6 57 0.0012 35.0 13.3 114 216-351 300-420 (530)
106 PLN02301 pectinesterase/pectin 75.0 54 0.0012 35.4 13.1 115 217-352 319-439 (548)
107 PLN02713 Probable pectinestera 74.8 43 0.00094 36.3 12.4 113 218-351 337-455 (566)
108 PLN02176 putative pectinestera 74.5 79 0.0017 31.9 13.4 112 219-351 120-246 (340)
109 PLN02488 probable pectinestera 72.9 83 0.0018 33.5 13.5 114 218-352 281-400 (509)
110 PLN02484 probable pectinestera 71.7 77 0.0017 34.6 13.4 116 216-352 355-476 (587)
111 PLN03043 Probable pectinestera 71.5 98 0.0021 33.4 14.1 116 216-352 308-429 (538)
112 PLN02201 probable pectinestera 70.9 92 0.002 33.4 13.6 114 216-351 288-408 (520)
113 PLN02995 Probable pectinestera 70.9 59 0.0013 35.0 12.3 114 218-352 309-428 (539)
114 PLN02990 Probable pectinestera 70.7 74 0.0016 34.6 13.0 114 218-352 344-463 (572)
115 PLN02468 putative pectinestera 70.7 64 0.0014 35.0 12.5 115 217-352 341-461 (565)
116 PLN02197 pectinesterase 68.8 1.1E+02 0.0024 33.3 13.8 116 216-352 359-481 (588)
117 PLN02314 pectinesterase 68.4 71 0.0015 34.9 12.4 115 217-352 361-481 (586)
118 PF07172 GRP: Glycine rich pro 68.0 5.6 0.00012 32.2 3.0 17 6-22 1-17 (95)
119 PRK10531 acyl-CoA thioesterase 67.9 1.1E+02 0.0025 31.7 13.1 127 215-351 200-336 (422)
120 PF01095 Pectinesterase: Pecti 65.4 46 0.001 32.9 9.5 111 218-351 84-202 (298)
121 PLN02497 probable pectinestera 63.9 1.4E+02 0.0031 30.0 12.6 113 218-351 112-239 (331)
122 KOG1777 Putative Zn-finger pro 63.9 1.6E+02 0.0035 30.5 12.8 39 72-112 35-73 (625)
123 PLN02304 probable pectinestera 63.8 1.8E+02 0.0039 29.8 13.4 19 193-211 157-175 (379)
124 PRK13621 psbV cytochrome c-550 60.2 14 0.0003 33.2 4.2 58 35-96 31-93 (170)
125 PF09251 PhageP22-tail: Salmon 58.2 2.3E+02 0.0051 29.3 13.9 90 247-350 263-366 (549)
126 smart00710 PbH1 Parallel beta- 49.7 19 0.0004 20.3 2.4 19 311-329 3-22 (26)
127 smart00722 CASH Domain present 43.2 1.3E+02 0.0029 25.0 7.9 13 197-209 44-56 (146)
128 PRK13617 psbV cytochrome c-550 34.5 1E+02 0.0022 27.7 5.6 18 1-18 1-19 (170)
129 smart00722 CASH Domain present 28.2 1.5E+02 0.0032 24.8 5.7 67 195-264 73-143 (146)
130 PF11429 Colicin_D: Colicin D; 27.3 1.2E+02 0.0026 24.4 4.3 38 56-99 10-48 (92)
131 PRK09752 adhesin; Provisional 27.0 1.1E+03 0.025 28.0 16.6 39 221-259 121-164 (1250)
132 PHA00672 hypothetical protein 25.1 78 0.0017 26.8 3.0 29 88-117 50-78 (152)
133 cd07986 LPLAT_ACT14924-like Ly 22.2 88 0.0019 28.9 3.2 27 67-97 83-109 (210)
134 COG4704 Uncharacterized protei 20.2 2.5E+02 0.0053 24.3 5.0 36 66-102 59-94 (151)
No 1
>PLN02793 Probable polygalacturonase
Probab=100.00 E-value=1.4e-72 Score=576.45 Aligned_cols=363 Identities=23% Similarity=0.429 Sum_probs=320.8
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHH-HhhhcccCCCcEEEeCCC-eeeeeeecc----cccceEEEeeCcEEEecC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAID-HLSRFQSEGGSQLFVPPG-KWLTGSFNL----TSHFTLFLHKDAVLLASQ 122 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~-~~~~~~~~~g~~v~iP~G-~Y~~~~l~l----~sn~~l~~~~ga~i~~~~ 122 (480)
.+.++||+||||+|||.+|||+|||+||+ +|++ .+|++|+||+| +|+++++.| ||+++|+++ ++|+++.
T Consensus 49 ~~~~~~V~dfGA~gDG~tddT~Aiq~Ai~~aC~~---~ggg~v~vP~G~~fl~~~i~l~gpcks~vtL~l~--g~l~~~~ 123 (443)
T PLN02793 49 SERVLHVGDFGAKGDGVTDDTQAFKEAWKMACSS---KVKTRIVIPAGYTFLVRPIDLGGPCKAKLTLQIS--GTIIAPK 123 (443)
T ss_pred CceEEEhhhcccCCCCCCccHHHHHHHHHHHhcc---CCCCEEEECCCceEEEEEEEECCccCCCeEEEEE--EEEEccC
Confidence 45799999999999999999999999999 5654 67899999999 599999999 899999996 8999999
Q ss_pred CCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhcc---CCCCcCCCeEEEEEeeec
Q 011659 123 DEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA---GELKYTRPYLIEIMYSQN 199 (480)
Q Consensus 123 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~---~~~~~~~p~~i~~~~~~n 199 (480)
++++|+... ...|+++.+.+|++|+|. |+|||+|+.||..... ......||++|.|.+|+|
T Consensus 124 d~~~w~~~~---------------~~~~i~~~~~~ni~ItG~-G~IDG~G~~ww~~~~~~~~~~~~~~rP~~i~f~~~~n 187 (443)
T PLN02793 124 DPDVWKGLN---------------PRKWLYFHGVNHLTVEGG-GTVNGMGHEWWAQSCKINHTNPCRHAPTAITFHKCKD 187 (443)
T ss_pred ChHHccCCC---------------CceEEEEecCceEEEEec-eEEECCCcccccccccccCCCCccCCceEEEEEeecc
Confidence 998886421 236899999999999996 9999999999975321 112245899999999999
Q ss_pred EEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCC
Q 011659 200 IQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279 (480)
Q Consensus 200 v~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~ 279 (480)
++|++++++|+|+|++++..|+|++|++++|.++..++|+||||+.+|+||+|+||+|.++||||++|++
T Consensus 188 v~v~gitl~nSp~~~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~---------- 257 (443)
T PLN02793 188 LRVENLNVIDSQQMHIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGN---------- 257 (443)
T ss_pred EEEECeEEEcCCCeEEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCC----------
Confidence 9999999999999999999999999999999999889999999999999999999999999999999986
Q ss_pred CceeEEEEEEEEeCCCcceEEEcccc----cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeE
Q 011659 280 PTKQLIIRRLTCISPFSAVIALGSEM----SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF 355 (480)
Q Consensus 280 ~~~ni~I~n~~~~~~~~~gi~igs~~----~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i 355 (480)
++||+|+||+|..+ |||+|||++ .++++||+|+||+|.++.+|++||||.+++|.|+||+|+|++|+++.+||
T Consensus 258 -s~nI~I~n~~c~~G--hGisIGSlg~~~~~~~V~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nItf~ni~m~nv~~pI 334 (443)
T PLN02793 258 -SSRIKIRNIACGPG--HGISIGSLGKSNSWSEVRDITVDGAFLSNTDNGVRIKTWQGGSGNASKITFQNIFMENVSNPI 334 (443)
T ss_pred -cCCEEEEEeEEeCC--ccEEEecccCcCCCCcEEEEEEEccEEeCCCceEEEEEeCCCCEEEEEEEEEeEEEecCCceE
Confidence 89999999999753 799999974 46799999999999999999999999988899999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeeccC
Q 011659 356 WITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS 434 (480)
Q Consensus 356 ~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~ 434 (480)
.|++.|+.....+..+...+.|+||+|+||+++.. +.++.|.|+++.||+||+|+||+++..+.+ ...+.|.|+++..
T Consensus 335 ~I~q~Y~~~~~~~~~~ts~v~I~nI~~~nI~Gt~~~~~ai~l~cs~~~pc~ni~l~nI~l~~~~g~-~~~~~C~n~~g~~ 413 (443)
T PLN02793 335 IIDQYYCDSRKPCANQTSAVKVENISFVHIKGTSATEEAIKFACSDSSPCEGLYLEDVQLLSSTGD-FTESFCWEAYGSS 413 (443)
T ss_pred EEEeeecCCCCCCCCCCCCeEEEeEEEEEEEEEEcccccEEEEeCCCCCEeeEEEEeeEEEecCCC-CCCcEEEccEEeE
Confidence 99999976433222334456899999999999986 568999999999999999999999976433 5578999999988
Q ss_pred -CcccCCCCCCCC
Q 011659 435 -SGVTPKPCELLP 446 (480)
Q Consensus 435 -~~~~p~~~~~~~ 446 (480)
+.+.|.||+...
T Consensus 414 ~~~~~p~~C~~~~ 426 (443)
T PLN02793 414 SGQVYPPPCFSDS 426 (443)
T ss_pred CCeEcCCccccCC
Confidence 558899998653
No 2
>PLN02155 polygalacturonase
Probab=100.00 E-value=1.3e-71 Score=560.56 Aligned_cols=358 Identities=23% Similarity=0.393 Sum_probs=313.6
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHH-HhhhcccCCCcEEEeCCCeeeeeeecc----cccceEEEeeCcEEEecCC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAID-HLSRFQSEGGSQLFVPPGKWLTGSFNL----TSHFTLFLHKDAVLLASQD 123 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~-~~~~~~~~~g~~v~iP~G~Y~~~~l~l----~sn~~l~~~~ga~i~~~~~ 123 (480)
++.++||+||||+|||++|||+|||+||+ +|++ ++|++|+||+|+|++++|.| ||+++|+++ ++|+++.+
T Consensus 24 ~~~~~nv~~yGA~gDG~td~t~Ai~~Ai~~aC~~---~gGg~v~vP~G~yl~g~i~l~gpcksnv~l~l~--G~l~~~~d 98 (394)
T PLN02155 24 ASNVFNVVSFGAKPDGVTDSTAAFLKAWQGACGS---ASSATVVVPTGTFLLKVITFGGPCKSKITFQVA--GTVVAPED 98 (394)
T ss_pred CCcEEEhhhcCcCCCCccccHHHHHHHHHHHccc---CCCeEEEECCCcEEEEEEEEcccCCCCceEEEe--eEEECccc
Confidence 44699999999999999999999999996 6765 78999999999999999998 899999997 47777766
Q ss_pred CCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEE
Q 011659 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQIS 203 (480)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~ 203 (480)
+..|.. ...|+.+.+++|+.|+| |+|||||+.||...........+|+++.|.+|+|++|+
T Consensus 99 ~~~~~~-----------------~~~wi~~~~~~~i~i~G--G~iDGqG~~ww~~~~~~~~~~~~p~~i~~~~~~nv~i~ 159 (394)
T PLN02155 99 YRTFGN-----------------SGYWILFNKVNRFSLVG--GTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIIS 159 (394)
T ss_pred cccccc-----------------cceeEEEECcCCCEEEc--cEEecCceeEEEcccCCCCCCCcccceeEEEeeeEEEE
Confidence 544421 02478999999999999 99999999999764433333457889999999999999
Q ss_pred eEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCcee
Q 011659 204 NLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283 (480)
Q Consensus 204 ~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~n 283 (480)
+++++|||.|++++..|+|++|++++|.++.+++|+||||+.+|+||+|+||+|.+|||||+++++ ++|
T Consensus 160 gitl~nSp~w~i~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~g-----------s~n 228 (394)
T PLN02155 160 GVKSMNSQVSHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPG-----------TRN 228 (394)
T ss_pred CeEEEcCCCeEEEEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCC-----------Cce
Confidence 999999999999999999999999999999889999999999999999999999999999999997 899
Q ss_pred EEEEEEEEeCCCcceEEEccc----ccCceeEEEEEeeEEeCCCceEEEEeecC-CCCceecEEEEeeEecccceeEEEE
Q 011659 284 LIIRRLTCISPFSAVIALGSE----MSGGIQDVRAEDITAIDSESGVRIKTAVG-RGGFVKDVYVRRMTMKTMKWAFWIT 358 (480)
Q Consensus 284 i~I~n~~~~~~~~~gi~igs~----~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~ 358 (480)
|+|+||+|.. +||++|||+ ..++++||+|+||+|.++.+|++||||.+ ++|.|+||+|+|++|+++.+||.|+
T Consensus 229 I~I~n~~c~~--GhGisIGS~g~~~~~~~V~nV~v~n~~~~~t~~GirIKT~~~~~gG~v~nI~f~ni~m~~v~~pI~i~ 306 (394)
T PLN02155 229 FLITKLACGP--GHGVSIGSLAKELNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQDLVMKNVENPIIID 306 (394)
T ss_pred EEEEEEEEEC--CceEEeccccccCCCCcEEEEEEEeeEEeCCCcEEEEEEecCCCCEEEEEEEEEeEEEcCccccEEEE
Confidence 9999999985 379999997 36789999999999999999999999865 6799999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeeccC-Cc
Q 011659 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS-SG 436 (480)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~-~~ 436 (480)
+.|+.....+..+...+.|+||+|+||+++.. +.++.|.|+++.||+||+|+||+++.. ++....+.|.|+.+.. +.
T Consensus 307 q~Y~~~~~~~~~~~s~v~i~~It~~ni~gt~~~~~a~~l~c~~~~pc~~I~l~nv~i~~~-~~~~~~~~C~n~~G~~~~~ 385 (394)
T PLN02155 307 QNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYN-KGTPATSFCFNAVGKSLGV 385 (394)
T ss_pred ecccCCCCCCcCCCCCeEEEEEEEEeeEEEecCCceEEEEeCCCCCEEEEEEEeeEEEec-CCCccCcEEeccEeEEccc
Confidence 99975432221223346899999999999987 568899999999999999999999987 3455689999999987 54
Q ss_pred ccCCCCCC
Q 011659 437 VTPKPCEL 444 (480)
Q Consensus 437 ~~p~~~~~ 444 (480)
+.|.+|+.
T Consensus 386 ~~p~~c~~ 393 (394)
T PLN02155 386 IQPTSCLN 393 (394)
T ss_pred CCcccccC
Confidence 58888964
No 3
>PLN02218 polygalacturonase ADPG
Probab=100.00 E-value=7.5e-71 Score=560.98 Aligned_cols=354 Identities=27% Similarity=0.462 Sum_probs=311.6
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHH-HhhhcccCCCcEEEeCCC-eeeeeeeccc----ccceEEEeeCcEEEec
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAID-HLSRFQSEGGSQLFVPPG-KWLTGSFNLT----SHFTLFLHKDAVLLAS 121 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~-~~~~~~~~~g~~v~iP~G-~Y~~~~l~l~----sn~~l~~~~ga~i~~~ 121 (480)
+++.++||+||||+|||++|||+|||+||+ +|++ .++++|+||+| +|+++++.|+ ++++|++ +|+|+++
T Consensus 63 ~~~~~~nv~dfGA~gDG~tddT~Af~~Ai~~aCs~---~Ggg~v~vP~G~tyl~~~i~l~gp~ks~~~l~l--~g~L~~s 137 (431)
T PLN02218 63 RTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSS---NGAVNLLVPKGNTYLLKSIQLTGPCKSIRTVQI--FGTLSAS 137 (431)
T ss_pred CCCcEEEeeecccCCCCCcccHHHHHHHHHHhhhc---CCCcEEEECCCCeEEEeeeEecCccCCceEEEE--EEEEEeC
Confidence 468899999999999999999999999995 5654 67789999999 6999999985 6777766 6999999
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCC---CCcCCCeEEEEEee
Q 011659 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGE---LKYTRPYLIEIMYS 197 (480)
Q Consensus 122 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~---~~~~~p~~i~~~~~ 197 (480)
.++.+|+. ...|+.+.+++||+|+|. .|+|||+|+.||....... ....||+++.|.+|
T Consensus 138 ~d~~~y~~-----------------~~~wi~~~~~~ni~I~G~~~GtIDG~G~~WW~~~~~~~~~~~~~~rP~~i~f~~~ 200 (431)
T PLN02218 138 QKRSDYKD-----------------ISKWIMFDGVNNLSVDGGSTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNS 200 (431)
T ss_pred CChhhccc-----------------cccCEEEecCcEEEEECCCCcEEeCCchhhhhcccccCCcCccCcCCEEEEEEcc
Confidence 99988853 135789999999999994 3999999999998643221 12469999999999
Q ss_pred ecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCccc
Q 011659 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277 (480)
Q Consensus 198 ~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~ 277 (480)
+|++|++++++|+|+|++++..|+||+|++++|.++.+++|+||||+.+|+||+|+||+|.+|||||++|+|
T Consensus 201 ~nv~I~gitl~nSp~w~i~~~~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksg-------- 272 (431)
T PLN02218 201 KSLIVKNLRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESG-------- 272 (431)
T ss_pred ccEEEeCeEEEcCCCEEEEEEceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCC--------
Confidence 999999999999999999999999999999999999889999999999999999999999999999999997
Q ss_pred CCCceeEEEEEEEEeCCCcceEEEccccc----CceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccce
Q 011659 278 GMPTKQLIIRRLTCISPFSAVIALGSEMS----GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353 (480)
Q Consensus 278 ~~~~~ni~I~n~~~~~~~~~gi~igs~~~----~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~ 353 (480)
++||+|+||+|.. +|||+|||++. +.++||+|+||+|.++.+|+|||||++++|.|+||+|+|++|+++.+
T Consensus 273 ---s~nI~I~n~~c~~--GHGisIGS~g~~~~~~~V~nV~v~n~~~~~t~nGvRIKT~~Gg~G~v~nI~f~ni~m~~V~~ 347 (431)
T PLN02218 273 ---SQNVQINDITCGP--GHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMENVKN 347 (431)
T ss_pred ---CceEEEEeEEEEC--CCCEEECcCCCCCCCceEEEEEEEccEEecCCcceEEeecCCCCeEEEEEEEEeEEEEcccc
Confidence 8999999999974 37999999873 57999999999999999999999999989999999999999999999
Q ss_pred eEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 354 AFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 354 ~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
||.|++.|+..+... .+...+.|+||+|+||+++.. +.++.|.|+++.||+||+|+||+++.. ...|.|+++
T Consensus 348 pI~Idq~Y~~~~~~~-~~~s~v~I~nI~~~NI~gtsa~~~ai~l~cs~~~pc~nI~l~nV~i~~~------~~~c~n~~~ 420 (431)
T PLN02218 348 PIIIDQDYCDKSKCT-SQQSAVQVKNVVYRNISGTSASDVAITFNCSKNYPCQGIVLDNVNIKGG------KATCTNANV 420 (431)
T ss_pred cEEEEeeccCCCCCC-CCCCCeEEEEEEEEeEEEEecCCcEEEEEECCCCCEeeEEEEeEEEECC------eeeEEEeeE
Confidence 999999998654322 233456899999999999977 578999999999999999999999852 457999999
Q ss_pred cCCcccCCCCC
Q 011659 433 ISSGVTPKPCE 443 (480)
Q Consensus 433 ~~~~~~p~~~~ 443 (480)
....+.|+.|.
T Consensus 421 ~~~~~~~p~c~ 431 (431)
T PLN02218 421 VDKGAVSPQCN 431 (431)
T ss_pred EEcccCCCCCC
Confidence 88555555773
No 4
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=100.00 E-value=4.2e-71 Score=559.30 Aligned_cols=357 Identities=24% Similarity=0.393 Sum_probs=311.1
Q ss_pred ccCceeEEEeecCcCCCCcchhHHHHHHHHH-HhhhcccCCCcEEEeCCCeeeeeeeccc------ccceEEEeeCcEEE
Q 011659 47 SCRAHSASLEEFGGVGDGTTSNTKAFKAAID-HLSRFQSEGGSQLFVPPGKWLTGSFNLT------SHFTLFLHKDAVLL 119 (480)
Q Consensus 47 ~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~-~~~~~~~~~g~~v~iP~G~Y~~~~l~l~------sn~~l~~~~ga~i~ 119 (480)
.+.+.++||+||||+|||.+|||+|||+||+ +|++ .+|++|+||+|+|+++++.|+ ++++| +|+
T Consensus 31 ~~~~~~~nv~d~GA~gDg~tddT~Ai~~Ai~~aC~~---~Ggg~V~vP~G~yl~g~i~lkgpc~~~s~v~l------~L~ 101 (404)
T PLN02188 31 GSSTFLFDVRSFGARANGHTDDSKAFMAAWKAACAS---TGAVTLLIPPGTYYIGPVQFHGPCTNVSSLTF------TLK 101 (404)
T ss_pred cCCceEEehhhcCcCCCCCeeCHHHHHHHHHHHhcc---CCCeEEEECCCeEEEEeEEeCCCcCcceeEEE------EEE
Confidence 4567899999999999999999999999997 4654 678899999999999999997 34444 889
Q ss_pred ecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhcc--CCCCcCCCeEEEEEee
Q 011659 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRA--GELKYTRPYLIEIMYS 197 (480)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~--~~~~~~~p~~i~~~~~ 197 (480)
++.++++|+.. ..|+.+..++||+|+|. |+|||+|+.||+.... ......||++|.|.+|
T Consensus 102 ~s~d~~~y~~~-----------------~~~i~~~~~~ni~I~G~-G~IDG~G~~ww~~~~~~~~~~~~~rP~~i~f~~~ 163 (404)
T PLN02188 102 AATDLSRYGSG-----------------NDWIEFGWVNGLTLTGG-GTFDGQGAAAWPFNKCPIRKDCKLLPTSVKFVNM 163 (404)
T ss_pred cCCCHHHCCCc-----------------cceEEEeceeeEEEEee-EEEeCCCcccccccccccCCCCCcCceEEEEEee
Confidence 99999888631 23677788999999996 9999999999975321 1223568999999999
Q ss_pred ecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCccc
Q 011659 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277 (480)
Q Consensus 198 ~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~ 277 (480)
+|++|++++++|||+|++++..|++|+|++++|.++.+++|+||||+++|+||+|+||+|.+|||||++|++
T Consensus 164 ~nv~i~gitl~nSp~w~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~GDDcIaiksg-------- 235 (404)
T PLN02188 164 NNTVVRGITSVNSKFFHIALVECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGTGDDCISIGQG-------- 235 (404)
T ss_pred eeEEEeCeEEEcCCCeEEEEEccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeCCCcEEEEccC--------
Confidence 999999999999999999999999999999999999889999999999999999999999999999999997
Q ss_pred CCCceeEEEEEEEEeCCCcceEEEcc----cccCceeEEEEEeeEEeCCCceEEEEeecC--CCCceecEEEEeeEeccc
Q 011659 278 GMPTKQLIIRRLTCISPFSAVIALGS----EMSGGIQDVRAEDITAIDSESGVRIKTAVG--RGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 278 ~~~~~ni~I~n~~~~~~~~~gi~igs----~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~--~~g~v~nI~~~ni~~~~~ 351 (480)
++||+|+|+.|.. +|||+||| ++.++++||+|+||+|.++.+|++||||.+ ++|.|+||+|+|++|+++
T Consensus 236 ---~~nI~I~n~~c~~--ghGisiGSlG~~~~~~~V~nV~v~n~~~~~t~~GiriKt~~g~~~~G~v~nI~f~ni~m~~v 310 (404)
T PLN02188 236 ---NSQVTITRIRCGP--GHGISVGSLGRYPNEGDVTGLVVRDCTFTGTTNGIRIKTWANSPGKSAATNMTFENIVMNNV 310 (404)
T ss_pred ---CccEEEEEEEEcC--CCcEEeCCCCCCCcCCcEEEEEEEeeEEECCCcEEEEEEecCCCCceEEEEEEEEeEEecCc
Confidence 7899999999974 37999999 556789999999999999999999999976 358999999999999999
Q ss_pred ceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeee
Q 011659 352 KWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDI 430 (480)
Q Consensus 352 ~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~ 430 (480)
.+||.|++.|+.++.....+...+.|+||+|+||+++.. ..++.|.|+++.||++|+|+||+++.........+.|.|+
T Consensus 311 ~~pI~i~~~Y~~~~~~~~~~~s~v~I~nIt~~nI~gt~~~~~a~~l~cs~~~pc~ni~~~nV~i~~~~g~~~~~~~C~nv 390 (404)
T PLN02188 311 TNPIIIDQKYCPFYSCESKYPSGVTLSDIYFKNIRGTSSSQVAVLLKCSRGVPCQGVYLQDVHLDLSSGEGGTSSSCENV 390 (404)
T ss_pred cceEEEEccccCCCCCCcCCCCCcEEEeEEEEEEEEEecCceEEEEEECCCCCEeeEEEEeeEEEecCCCCCcCceeEcc
Confidence 999999999976543211122346899999999999886 5688999999999999999999999764334557999999
Q ss_pred eccC-CcccCCCCC
Q 011659 431 TGIS-SGVTPKPCE 443 (480)
Q Consensus 431 ~~~~-~~~~p~~~~ 443 (480)
++.. +.+.|.+|+
T Consensus 391 ~g~~~g~~~p~~C~ 404 (404)
T PLN02188 391 RAKYIGTQIPPPCP 404 (404)
T ss_pred eeEEcccCcCCCCC
Confidence 9988 678999995
No 5
>PLN03003 Probable polygalacturonase At3g15720
Probab=100.00 E-value=1.3e-69 Score=549.40 Aligned_cols=361 Identities=26% Similarity=0.479 Sum_probs=311.7
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCe-eeeeeecccccc---eEEEeeCcEEEecCCC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGK-WLTGSFNLTSHF---TLFLHKDAVLLASQDE 124 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~-Y~~~~l~l~sn~---~l~~~~ga~i~~~~~~ 124 (480)
.+.++||+||||+|||++|||+|||+||++|++ +.+|++|+||+|+ |+++++.|++++ .+.++..++|+++..
T Consensus 20 ~~~~fnV~~yGA~gDG~tDdT~Af~~Aw~aaC~--~~ggg~v~VP~G~~yl~~pl~l~gpck~~~~~~~i~G~i~ap~~- 96 (456)
T PLN03003 20 SSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCS--GTGDGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSK- 96 (456)
T ss_pred eeeEEehhhcCCCCCCCcccHHHHHHHHHHhhh--ccCCCEEEECCCceEEeeeeEeCCCccCcceeeccCceEecCcc-
Confidence 456899999999999999999999999999442 1678999999995 899999998753 355666788887543
Q ss_pred CCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEe
Q 011659 125 KEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISN 204 (480)
Q Consensus 125 ~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~ 204 (480)
..|.. ....||.+.+++|++|+|. |+|||+|+.||.. ...||++++|.+|+|++|+|
T Consensus 97 ~~w~~----------------~~~~wI~f~~~~~i~I~G~-GtIDGqG~~wW~~------~~~rP~~l~f~~~~nv~I~g 153 (456)
T PLN03003 97 GNWKG----------------DKDQWILFTDIEGLVIEGD-GEINGQGSSWWEH------KGSRPTALKFRSCNNLRLSG 153 (456)
T ss_pred ccccC----------------CCcceEEEEcccceEEecc-ceEeCCchhhhhc------ccCCceEEEEEecCCcEEeC
Confidence 23421 1135899999999999996 9999999999974 24689999999999999999
Q ss_pred EEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeE
Q 011659 205 LTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQL 284 (480)
Q Consensus 205 v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni 284 (480)
++++|||+|++++..|++++|++++|.++..++|+||||+.+|+||+|+||.|.+|||||++|++ ++||
T Consensus 154 itl~NSp~w~i~i~~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksg-----------s~NI 222 (456)
T PLN03003 154 LTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNI 222 (456)
T ss_pred eEEecCCcEEEEEeccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCC-----------CccE
Confidence 99999999999999999999999999999889999999999999999999999999999999997 8999
Q ss_pred EEEEEEEeCCCcceEEEccccc----CceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEEee
Q 011659 285 IIRRLTCISPFSAVIALGSEMS----GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGS 360 (480)
Q Consensus 285 ~I~n~~~~~~~~~gi~igs~~~----~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~ 360 (480)
+|+||+|.. +|||+|||++. +.++||+|+||+|.++.+|+|||||.+++|.|+||+|+|++|+++.+||.|++.
T Consensus 223 ~I~n~~c~~--GHGISIGSlg~~g~~~~V~NV~v~n~~~~~T~nGvRIKT~~Gg~G~v~nItf~nI~m~nV~~pI~Idq~ 300 (456)
T PLN03003 223 HISGIDCGP--GHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQF 300 (456)
T ss_pred EEEeeEEEC--CCCeEEeeccCCCCcceEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEecCccceEEEEcc
Confidence 999999984 37999999974 459999999999999999999999998889999999999999999999999999
Q ss_pred cCCCC-CCCC-CCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecC--CCCccceeEeeeeccCC
Q 011659 361 YGSHP-DNNY-DPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTN--KPKKLQWNCTDITGISS 435 (480)
Q Consensus 361 ~~~~~-~~~~-~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~--~~~~~~~~c~~~~~~~~ 435 (480)
|+... ...+ .+...+.|+||+|+||+++.. +.++.|.|+++.||+||+|+||+++... ++....+.|.|+.+...
T Consensus 301 Y~~~~~~~~~~~~~s~v~IsnI~f~NI~GTs~~~~ai~l~Cs~~~PC~nI~l~ni~l~~~~~g~~~~~~~~C~Nv~G~~~ 380 (456)
T PLN03003 301 YNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGAST 380 (456)
T ss_pred cCCCCCCCcccCCCCCcEEEeEEEEeEEEEeCccceEEEEeCCCCCeeeEEEEEEEEEecCCCCCCccCcEEeccccccC
Confidence 97532 2212 233457999999999999876 5788999999999999999999999762 23356899999999885
Q ss_pred cc-cCCCCCCCCCC
Q 011659 436 GV-TPKPCELLPDH 448 (480)
Q Consensus 436 ~~-~p~~~~~~~~~ 448 (480)
.+ .|.+|++....
T Consensus 381 ~~~~~~~C~~~~~~ 394 (456)
T PLN03003 381 IAVPGLECLELSTD 394 (456)
T ss_pred ceECCCCccccCCC
Confidence 54 45589986543
No 6
>PLN03010 polygalacturonase
Probab=100.00 E-value=1.2e-68 Score=539.93 Aligned_cols=348 Identities=26% Similarity=0.432 Sum_probs=308.1
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCC--CcEEEeCCC-eeeeeeecccc-----cceEEEeeCcEEEe
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEG--GSQLFVPPG-KWLTGSFNLTS-----HFTLFLHKDAVLLA 120 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~--g~~v~iP~G-~Y~~~~l~l~s-----n~~l~~~~ga~i~~ 120 (480)
++.++||+||||+|||++|||+|||+||++|+. .+ +++|+||+| +|+++++.|++ +++|++ +|+|++
T Consensus 43 ~~~~~nV~dyGA~gDG~tddt~A~~~Ai~~ac~---~~g~~g~v~vP~G~~yl~~~i~l~~pc~~~~v~l~l--~G~l~~ 117 (409)
T PLN03010 43 NGQNYNVLKFGAKGDGQTDDSNAFLQAWNATCG---GEGNINTLLIPSGKTYLLQPIEFKGPCKSTSIKVQL--DGIIVA 117 (409)
T ss_pred CCcEEeeeecCcCCCCCcccHHHHHHHHHHHcc---CCCCceEEEECCCCeEEEEeEEecCCCCCCcEEEEE--ccEEEc
Confidence 446899999999999999999999999997653 23 379999999 79999999995 566666 489999
Q ss_pred cCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecE
Q 011659 121 SQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNI 200 (480)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv 200 (480)
+.++.+|+... ...|+.+.+++|++|+|. |+|||+|+.||. ++.|.+|+|+
T Consensus 118 ~~d~~~w~~~~---------------~~~wi~f~~v~nv~I~G~-G~IDG~G~~ww~-------------~l~~~~~~nv 168 (409)
T PLN03010 118 PSNIVAWSNPK---------------SQMWISFSTVSGLMIDGS-GTIDGRGSSFWE-------------ALHISKCDNL 168 (409)
T ss_pred cCChhhccCCC---------------CcceEEEecccccEEeec-eEEeCCCccccc-------------eEEEEeecCe
Confidence 99988885311 135788999999999996 999999999996 5899999999
Q ss_pred EEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCC
Q 011659 201 QISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280 (480)
Q Consensus 201 ~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~ 280 (480)
+|++++++|+|+|++++..|++++|++++|.++..++|+||||+.+|++|+|+||+|.+|||||++|++
T Consensus 169 ~v~gitl~nsp~~~i~i~~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~gDDcIaiksg----------- 237 (409)
T PLN03010 169 TINGITSIDSPKNHISIKTCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTGDDCIAINSG----------- 237 (409)
T ss_pred EEeeeEEEcCCceEEEEeccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecCCCeEEecCC-----------
Confidence 999999999999999999999999999999999888999999999999999999999999999999997
Q ss_pred ceeEEEEEEEEeCCCcceEEEcccccC----ceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMSG----GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~~----~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~ 356 (480)
+.|+.|+++.|.. +|||+|||++.+ .++||+|+||+|.++.+|+|||+|.+++|.|+||+|+||+|+++++||.
T Consensus 238 s~ni~I~~~~C~~--gHGisIGS~g~~~~~~~V~nV~v~n~~i~~t~~GirIKt~~G~~G~v~nItf~nI~m~~v~~pI~ 315 (409)
T PLN03010 238 SSNINITQINCGP--GHGISVGSLGADGANAKVSDVHVTHCTFNQTTNGARIKTWQGGQGYARNISFENITLINTKNPII 315 (409)
T ss_pred CCcEEEEEEEeEC--cCCEEEccCCCCCCCCeeEEEEEEeeEEeCCCcceEEEEecCCCEEEEEeEEEeEEEecCCccEE
Confidence 7889999999974 379999999654 3999999999999999999999999888999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeeccC-
Q 011659 357 ITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS- 434 (480)
Q Consensus 357 i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~- 434 (480)
|++.|+.....+..+.....|+||+|+||+++.. +.++.|.|++..||+||+|+||+++... +.++.+.|.|+.+..
T Consensus 316 I~q~Y~~~~~~~~~~~s~v~Isdi~~~ni~GT~~~~~~i~l~Cs~~~pC~ni~~~~v~l~~~~-g~~~~~~C~nv~g~~~ 394 (409)
T PLN03010 316 IDQQYIDKGKLDATKDSAVAISNVKYVGFRGTTSNENAITLKCSAITHCKDVVMDDIDVTMEN-GEKPKVECQNVEGESS 394 (409)
T ss_pred EEeeccCCCCCCCCCCCceEEEeEEEEeeEEEeCCCccEEEEeCCCCCEeceEEEEEEEEecC-CCccceEeeCcccccc
Confidence 9999986443333344556999999999999866 5789999999999999999999999863 335689999999977
Q ss_pred CcccCCCCCC
Q 011659 435 SGVTPKPCEL 444 (480)
Q Consensus 435 ~~~~p~~~~~ 444 (480)
+.+.|.+|++
T Consensus 395 ~~~~~~~C~~ 404 (409)
T PLN03010 395 DTDLMRDCFK 404 (409)
T ss_pred CCCCCCcccc
Confidence 6688889984
No 7
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=100.00 E-value=1.3e-53 Score=426.00 Aligned_cols=309 Identities=36% Similarity=0.620 Sum_probs=261.4
Q ss_pred CCCcEEEeCCCeeeeeeeccc----ccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceE
Q 011659 85 EGGSQLFVPPGKWLTGSFNLT----SHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVV 160 (480)
Q Consensus 85 ~~g~~v~iP~G~Y~~~~l~l~----sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~ 160 (480)
.++++|+||+|+|+++++.|+ +++++.|+ +++.++.....++ . ..||.+.+++|++
T Consensus 4 ~~~~~v~vP~g~~~~~~~~l~~~l~~~~~~~l~--G~~~~~~~~~~~~-----------------~-~~~i~~~~~~ni~ 63 (326)
T PF00295_consen 4 IGGGTVVVPAGTYLLGPLFLKSTLHSDVGLTLD--GTINFSYDNWEGP-----------------N-SALIYAENAENIT 63 (326)
T ss_dssp EEEESEEESTSTEEEEETSEETECETTCEEEEE--SEEEEG-EESTSE-------------------SEEEEEESEEEEE
T ss_pred CcCCEEEECCCCeEEceeEEEcccCCCeEEEEE--EEEEeCCCcccCC-----------------c-cEEEEEEceEEEE
Confidence 567899999999999999998 56666663 5555552222221 1 4689999999999
Q ss_pred EeCccceEeCCChhhhhhhcc-CCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCC
Q 011659 161 ITGDNGTIDGQGELWWRKFRA-GELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNT 239 (480)
Q Consensus 161 I~G~~G~idG~g~~~w~~~~~-~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~ 239 (480)
|+|. |+|||+|+.||+.... ......||+++.|.+|+|++|++++++|+|.|++++..|+|++|++++|.++...+|+
T Consensus 64 i~G~-G~IDG~G~~w~~~~~~~~~~~~~rp~~i~~~~~~~~~i~~i~~~nsp~w~~~~~~~~nv~i~~i~I~~~~~~~Nt 142 (326)
T PF00295_consen 64 ITGK-GTIDGNGQAWWDGSGDANNNGQRRPRLIRFNNCKNVTIEGITIRNSPFWHIHINDCDNVTISNITINNPANSPNT 142 (326)
T ss_dssp CTTS-SEEE--GGGTCSSCTTHCCSSSSSSESEEEEEEEEEEEESEEEES-SSESEEEESEEEEEEESEEEEEGGGCTS-
T ss_pred ecCC-ceEcCchhhhhccccccccccccccceeeeeeecceEEEeeEecCCCeeEEEEEccCCeEEcceEEEecCCCCCc
Confidence 9996 9999999999986433 1345689999999999999999999999999999999999999999999998878999
Q ss_pred CeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC----ceeEEEEE
Q 011659 240 DGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG----GIQDVRAE 315 (480)
Q Consensus 240 DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~----~v~nI~v~ 315 (480)
|||++.+|+||+|+||+|.++||||++|++ ..||+|+||+|.++ +|++|||++.+ .++||+|+
T Consensus 143 DGid~~~s~nv~I~n~~i~~gDD~Iaiks~-----------~~ni~v~n~~~~~g--hGisiGS~~~~~~~~~i~nV~~~ 209 (326)
T PF00295_consen 143 DGIDIDSSKNVTIENCFIDNGDDCIAIKSG-----------SGNILVENCTCSGG--HGISIGSEGSGGSQNDIRNVTFE 209 (326)
T ss_dssp -SEEEESEEEEEEESEEEESSSESEEESSE-----------ECEEEEESEEEESS--SEEEEEEESSSSE--EEEEEEEE
T ss_pred ceEEEEeeeEEEEEEeecccccCccccccc-----------ccceEEEeEEEecc--ccceeeeccCCccccEEEeEEEE
Confidence 999999999999999999999999999996 56999999999864 68999999865 48999999
Q ss_pred eeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc-eeE
Q 011659 316 DITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT-MAA 394 (480)
Q Consensus 316 n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-~~~ 394 (480)
||++.++.+|++||++.+++|.|+||+|+|++|+++.+||.|++.|..... ...+...+.|+||+|+||+++... .++
T Consensus 210 n~~i~~t~~gi~iKt~~~~~G~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~-~~~~~~~~~i~nI~~~nitg~~~~~~~i 288 (326)
T PF00295_consen 210 NCTIINTDNGIRIKTWPGGGGYVSNITFENITMENVKYPIFIDQDYRDGGP-CGKPPSGVSISNITFRNITGTSAGSSAI 288 (326)
T ss_dssp EEEEESESEEEEEEEETTTSEEEEEEEEEEEEEEEESEEEEEEEEECTTEE-SSCSSSSSEEEEEEEEEEEEEESTSEEE
T ss_pred EEEeeccceEEEEEEecccceEEeceEEEEEEecCCceEEEEEeccccccc-cCcccCCceEEEEEEEeeEEEeccceEE
Confidence 999999999999999998899999999999999999999999999976321 122334468999999999999885 789
Q ss_pred EEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 395 RLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 395 ~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
.|.|.++.||+||+|+||+++. + ...+.|.|+..
T Consensus 289 ~i~~~~~~~~~ni~f~nv~i~~-g---~~~~~c~nv~~ 322 (326)
T PF00295_consen 289 SIDCSPGSPCSNITFENVNITG-G---KKPAQCKNVPS 322 (326)
T ss_dssp EEE-BTTSSEEEEEEEEEEEES-S---BSESEEBSCCT
T ss_pred EEEECCcCcEEeEEEEeEEEEc-C---CcCeEEECCCC
Confidence 9999999999999999999997 2 56789998874
No 8
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3e-47 Score=391.01 Aligned_cols=306 Identities=36% Similarity=0.593 Sum_probs=258.8
Q ss_pred cccccCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCC
Q 011659 44 SAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123 (480)
Q Consensus 44 ~~~~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~ 123 (480)
....+....++|.+|||+|||.+|+++|||+||++|++ ++|++|+||+|+|+.++|+|||+++|++++|++|+++.+
T Consensus 74 ~~~~~~~t~~sv~~~ga~gDG~t~~~~aiq~AI~~ca~---a~Gg~V~lPaGtylsg~l~LKS~~~L~l~egatl~~~~~ 150 (542)
T COG5434 74 IKTAATDTAFSVSDDGAVGDGATDNTAAIQAAIDACAS---AGGGTVLLPAGTYLSGPLFLKSNVTLHLAEGATLLASSN 150 (542)
T ss_pred cccccccceeeeccccccccCCccCHHHHHHHHHhhhh---hcCceEEECCceeEeeeEEEecccEEEecCCceeeCCCC
Confidence 33445677899999999999999999999999999986 799999999999999999999999999999999999999
Q ss_pred CCCCCCCC--------C---------CCCCCccccCCCCcceeeEEEeceeceE-EeCccceEeCCC----hhhhhhhc-
Q 011659 124 EKEWPVIE--------P---------LPSYGRGRDTEGGRYSSLIFGTNLTDVV-ITGDNGTIDGQG----ELWWRKFR- 180 (480)
Q Consensus 124 ~~~~~~~~--------~---------~~~~~~g~~~~~~~~~~~i~~~~~~nv~-I~G~~G~idG~g----~~~w~~~~- 180 (480)
+.+|+.+. + ...+++| +... +..++.....+|.. |.|. |+++|++ ..||....
T Consensus 151 p~~y~~~~~~~~~~~~~~~~a~~~~~~~~~~~g--~~d~-~~~~~~~~~~~n~~~i~g~-~~i~g~~~~~g~~~~~~~g~ 226 (542)
T COG5434 151 PKDYPSFTSRFNGNSGPYVYATDSDNAMISGEG--LADG-KADLLIAGNSSNRKEIWGK-GTIDGNGYKRGDKWFSGLGA 226 (542)
T ss_pred hhhccccccccccccCcceeeecccCceeeeec--cccc-CcccceeccCCceEEEecc-ceecCccccchhhhhhcccc
Confidence 99998411 0 0011222 1111 22333444455655 8996 9999975 22775433
Q ss_pred -cCCCCc--CCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEE
Q 011659 181 -AGELKY--TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257 (480)
Q Consensus 181 -~~~~~~--~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i 257 (480)
...... .||..+.+..|.||++++++|.+++.|++++..|+|++++|++|.+.... |+||+++.+|+||+|++|+|
T Consensus 227 ~~~~i~~~~~rp~~~~l~~c~NV~~~g~~i~ns~~~~~h~~~~~nl~~~nl~I~~~~~~-NtDG~d~~sc~NvlI~~~~f 305 (542)
T COG5434 227 VETRIGGKGVRPRTVVLKGCRNVLLEGLNIKNSPLWTVHPVDCDNLTFRNLTIDANRFD-NTDGFDPGSCSNVLIEGCRF 305 (542)
T ss_pred hhhcccccCcCCceEEEeccceEEEeeeEecCCCcEEEeeecccCceecceEEECCCCC-CCCccccccceeEEEeccEE
Confidence 111122 69999999999999999999999999999999999999999999998744 99999999999999999999
Q ss_pred eeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCc
Q 011659 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337 (480)
Q Consensus 258 ~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~ 337 (480)
.+|||||++|++....+.....+++||.|+||++..++ .++.+|||+.++++||++|||.|.++.+|+|||+..+++|.
T Consensus 306 dtgDD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~gh-G~~v~Gse~~ggv~ni~ved~~~~~~d~GLRikt~~~~gG~ 384 (542)
T COG5434 306 DTGDDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGH-GGLVLGSEMGGGVQNITVEDCVMDNTDRGLRIKTNDGRGGG 384 (542)
T ss_pred ecCCceEEeecccCCcccccccccccEEEecceecccc-cceEeeeecCCceeEEEEEeeeeccCcceeeeeeeccccee
Confidence 99999999999987776667789999999999999887 58999999999999999999999999999999999999999
Q ss_pred eecEEEEeeEecccceeEEEE
Q 011659 338 VKDVYVRRMTMKTMKWAFWIT 358 (480)
Q Consensus 338 v~nI~~~ni~~~~~~~~i~i~ 358 (480)
++||+|++++|.++..+..|.
T Consensus 385 v~nI~~~~~~~~nv~t~~~i~ 405 (542)
T COG5434 385 VRNIVFEDNKMRNVKTKLSIN 405 (542)
T ss_pred EEEEEEecccccCcccceeee
Confidence 999999999999986555444
No 9
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.95 E-value=4.2e-27 Score=234.65 Aligned_cols=175 Identities=21% Similarity=0.245 Sum_probs=133.7
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCC
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~ 127 (480)
.+...+|+++|||++||.+|+|+|||+||++|+ .++++|.+|+|+|+.++|.|+++++|..+++++.+.-+.
T Consensus 33 ~p~r~~dv~~fGa~~dG~td~T~ALQaAIdaAa----~gG~tV~Lp~G~Y~~G~L~L~spltL~G~~gAt~~vIdG---- 104 (455)
T TIGR03808 33 TSTLGRDATQYGVRPNSPDDQTRALQRAIDEAA----RAQTPLALPPGVYRTGPLRLPSGAQLIGVRGATRLVFTG---- 104 (455)
T ss_pred CCccCCCHHHcCcCCCCcchHHHHHHHHHHHhh----cCCCEEEECCCceecccEEECCCcEEEecCCcEEEEEcC----
Confidence 344559999999999999999999999999986 467899999999999999999999999998886321110
Q ss_pred CCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEE
Q 011659 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTL 207 (480)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i 207 (480)
. ..++...+.++|+|+| -+|+|+|..| ..++.+|++..|++++|++++|
T Consensus 105 ------------------~-~~lIiai~A~nVTIsG--LtIdGsG~dl----------~~rdAgI~v~~a~~v~Iedn~L 153 (455)
T TIGR03808 105 ------------------G-PSLLSSEGADGIGLSG--LTLDGGGIPL----------PQRRGLIHCQGGRDVRITDCEI 153 (455)
T ss_pred ------------------C-ceEEEEecCCCeEEEe--eEEEeCCCcc----------cCCCCEEEEccCCceEEEeeEE
Confidence 0 2467778899999999 5999999654 2577899999999999999999
Q ss_pred EeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeee
Q 011659 208 INSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAV 266 (480)
Q Consensus 208 ~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai 266 (480)
.++..|++.+..|+ ..|.+.+|... ...+|+++.+++++|++++|.. .|++|.+
T Consensus 154 ~gsg~FGI~L~~~~-~~I~~N~I~g~----~~~~I~lw~S~g~~V~~N~I~g~RD~gi~i 208 (455)
T TIGR03808 154 TGSGGNGIWLETVS-GDISGNTITQI----AVTAIVSFDALGLIVARNTIIGANDNGIEI 208 (455)
T ss_pred EcCCcceEEEEcCc-ceEecceEecc----ccceEEEeccCCCEEECCEEEccCCCCeEE
Confidence 99999999999999 44444444432 2233555555555555555543 3434443
No 10
>PLN03003 Probable polygalacturonase At3g15720
Probab=99.91 E-value=3.5e-22 Score=203.61 Aligned_cols=252 Identities=14% Similarity=0.160 Sum_probs=191.9
Q ss_pred eEEEEEeeecEEEEeEEEEeCCC---c--------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEe
Q 011659 190 YLIEIMYSQNIQISNLTLINSPS---W--------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258 (480)
Q Consensus 190 ~~i~~~~~~nv~I~~v~i~ns~~---~--------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~ 258 (480)
..|.|.++++++|.|--..+..+ | .+.+..|+|+.|+++++.+++. ..+++..|++|+|+|..|.
T Consensus 105 ~wI~f~~~~~i~I~G~GtIDGqG~~wW~~~~~rP~~l~f~~~~nv~I~gitl~NSp~----w~i~i~~c~nV~i~~l~I~ 180 (456)
T PLN03003 105 QWILFTDIEGLVIEGDGEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPM----AHIHISECNYVTISSLRIN 180 (456)
T ss_pred ceEEEEcccceEEeccceEeCCchhhhhcccCCceEEEEEecCCcEEeCeEEecCCc----EEEEEeccccEEEEEEEEe
Confidence 47999999999999855555322 2 5789999999999999999763 3488999999999999998
Q ss_pred e-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecC
Q 011659 259 S-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG 333 (480)
Q Consensus 259 ~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~ 333 (480)
+ ..|+|.+.+ ++||+|+||.+.+++ +||+|++ +.+||+|+||++.. .+||.|.|...
T Consensus 181 ap~~spNTDGIDi~~------------S~nV~I~n~~I~tGD-DCIaiks----gs~NI~I~n~~c~~-GHGISIGSlg~ 242 (456)
T PLN03003 181 APESSPNTDGIDVGA------------SSNVVIQDCIIATGD-DCIAINS----GTSNIHISGIDCGP-GHGISIGSLGK 242 (456)
T ss_pred CCCCCCCCCcEeecC------------cceEEEEecEEecCC-CeEEeCC----CCccEEEEeeEEEC-CCCeEEeeccC
Confidence 6 457777765 899999999999998 9999997 46899999999965 58999999853
Q ss_pred CC--CceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccC-----------
Q 011659 334 RG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA----------- 400 (480)
Q Consensus 334 ~~--g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~----------- 400 (480)
.+ +.|+||+|+|+++.+..++++|+... .+.+.++||+|+||++.++..|+.|....
T Consensus 243 ~g~~~~V~NV~v~n~~~~~T~nGvRIKT~~----------Gg~G~v~nItf~nI~m~nV~~pI~Idq~Y~~~~~~~~~~~ 312 (456)
T PLN03003 243 DGETATVENVCVQNCNFRGTMNGARIKTWQ----------GGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDR 312 (456)
T ss_pred CCCcceEEEEEEEeeEEECCCcEEEEEEeC----------CCCeEEEEEEEEeEEecCccceEEEEcccCCCCCCCcccC
Confidence 22 56999999999999999999999752 23368999999999999998888775421
Q ss_pred ---CCCeeeEEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCC--CCCCCCCcCCCCCCCCccceeeeeeeee
Q 011659 401 ---GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPD--HEPAQTTECNFPDNRLPVENMGVQMCSY 475 (480)
Q Consensus 401 ---~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~--~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 475 (480)
...++||+|+||+.+.. ......+.|+...++.+..+-+.-+.++. ........|++..+..-....+. .|+.
T Consensus 313 ~~s~v~IsnI~f~NI~GTs~-~~~ai~l~Cs~~~PC~nI~l~ni~l~~~~~g~~~~~~~~C~Nv~G~~~~~~~~~-~C~~ 390 (456)
T PLN03003 313 KSSAVEVSKVVFSNFIGTSK-SEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVPGL-ECLE 390 (456)
T ss_pred CCCCcEEEeEEEEeEEEEeC-ccceEEEEeCCCCCeeeEEEEEEEEEecCCCCCCccCcEEeccccccCceECCC-Cccc
Confidence 13589999999999876 33446677877665554433333223321 11123478999877665444443 6763
No 11
>PLN02793 Probable polygalacturonase
Probab=99.90 E-value=7.9e-22 Score=202.60 Aligned_cols=254 Identities=10% Similarity=0.103 Sum_probs=191.4
Q ss_pred eEEEEEeeecEEEEeEEEEeCCC--------------------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCcc
Q 011659 190 YLIEIMYSQNIQISNLTLINSPS--------------------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN 249 (480)
Q Consensus 190 ~~i~~~~~~nv~I~~v~i~ns~~--------------------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~n 249 (480)
..|.+.+.+|++|.+--..+..+ ..+.+..|+|++|+++++.+++ ..-+++..|+|
T Consensus 135 ~~i~~~~~~ni~ItG~G~IDG~G~~ww~~~~~~~~~~~~~~rP~~i~f~~~~nv~v~gitl~nSp----~~~i~~~~~~n 210 (443)
T PLN02793 135 KWLYFHGVNHLTVEGGGTVNGMGHEWWAQSCKINHTNPCRHAPTAITFHKCKDLRVENLNVIDSQ----QMHIAFTNCRR 210 (443)
T ss_pred eEEEEecCceEEEEeceEEECCCcccccccccccCCCCccCCceEEEEEeeccEEEECeEEEcCC----CeEEEEEccCc
Confidence 46888899999998854444221 2478889999999999999975 33488899999
Q ss_pred EEEEecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCc
Q 011659 250 TRIEDCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES 324 (480)
Q Consensus 250 V~I~n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~ 324 (480)
|+|+|.+|.+ ..|+|.+.+ ++||+|+||++.+++ ++|+|++ +.+||+|+||++.. .+
T Consensus 211 v~i~~l~I~~p~~spNTDGIdi~~------------s~nV~I~n~~I~~gD-DcIaik~----~s~nI~I~n~~c~~-Gh 272 (443)
T PLN02793 211 VTISGLKVIAPATSPNTDGIHISA------------SRGVVIKDSIVRTGD-DCISIVG----NSSRIKIRNIACGP-GH 272 (443)
T ss_pred EEEEEEEEECCCCCCCCCcEeeec------------cceEEEEeCEEeCCC-CeEEecC----CcCCEEEEEeEEeC-Cc
Confidence 9999999986 467888766 899999999999998 9999986 46899999999965 48
Q ss_pred eEEEEeecC--CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccC--
Q 011659 325 GVRIKTAVG--RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA-- 400 (480)
Q Consensus 325 Gi~i~s~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~-- 400 (480)
|+.|.+... ..+.|+||+|+|+++.+..++++|+... .+.+.++||+|+||++.++..|+.|....
T Consensus 273 GisIGSlg~~~~~~~V~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~nItf~ni~m~nv~~pI~I~q~Y~~ 342 (443)
T PLN02793 273 GISIGSLGKSNSWSEVRDITVDGAFLSNTDNGVRIKTWQ----------GGSGNASKITFQNIFMENVSNPIIIDQYYCD 342 (443)
T ss_pred cEEEecccCcCCCCcEEEEEEEccEEeCCCceEEEEEeC----------CCCEEEEEEEEEeEEEecCCceEEEEeeecC
Confidence 999998643 2367999999999999999999999752 22358999999999999998888876421
Q ss_pred ----------CCCeeeEEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCCCCCCCCCcCCCCCCCCccceeee
Q 011659 401 ----------GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGV 470 (480)
Q Consensus 401 ----------~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 470 (480)
...++||+|+||+.+.+. .....+.|+...++.+..+...-+..+... ....+|++..+.......+.
T Consensus 343 ~~~~~~~~ts~v~I~nI~~~nI~Gt~~~-~~ai~l~cs~~~pc~ni~l~nI~l~~~~g~-~~~~~C~n~~g~~~~~~~p~ 420 (443)
T PLN02793 343 SRKPCANQTSAVKVENISFVHIKGTSAT-EEAIKFACSDSSPCEGLYLEDVQLLSSTGD-FTESFCWEAYGSSSGQVYPP 420 (443)
T ss_pred CCCCCCCCCCCeEEEeEEEEEEEEEEcc-cccEEEEeCCCCCEeeEEEEeeEEEecCCC-CCCcEEEccEEeECCeEcCC
Confidence 124899999999998752 234566776544443322222211222211 22468999888877766665
Q ss_pred eeeeeecc
Q 011659 471 QMCSYKAN 478 (480)
Q Consensus 471 ~~~~~~~~ 478 (480)
+|....+
T Consensus 421 -~C~~~~~ 427 (443)
T PLN02793 421 -PCFSDST 427 (443)
T ss_pred -ccccCCC
Confidence 8875543
No 12
>PLN03010 polygalacturonase
Probab=99.89 E-value=1.4e-21 Score=197.98 Aligned_cols=250 Identities=15% Similarity=0.191 Sum_probs=191.3
Q ss_pred eEEEEEeeecEEEEeEEEEeCCC---c-eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-----C
Q 011659 190 YLIEIMYSQNIQISNLTLINSPS---W-NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-----G 260 (480)
Q Consensus 190 ~~i~~~~~~nv~I~~v~i~ns~~---~-~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-----g 260 (480)
..+.|.+.+|+.|.+--..+... | .+.+..|+|++|+++++.+++. .-+++..|++|+|+|..|.+ .
T Consensus 131 ~wi~f~~v~nv~I~G~G~IDG~G~~ww~~l~~~~~~nv~v~gitl~nsp~----~~i~i~~~~nv~i~~i~I~a~~~s~N 206 (409)
T PLN03010 131 MWISFSTVSGLMIDGSGTIDGRGSSFWEALHISKCDNLTINGITSIDSPK----NHISIKTCNYVAISKINILAPETSPN 206 (409)
T ss_pred ceEEEecccccEEeeceEEeCCCccccceEEEEeecCeEEeeeEEEcCCc----eEEEEeccccEEEEEEEEeCCCCCCC
Confidence 35889999999999866666532 4 5889999999999999999763 34889999999999999986 4
Q ss_pred CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC--Cce
Q 011659 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFV 338 (480)
Q Consensus 261 dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~--g~v 338 (480)
.|+|.+.+ ++||+|+||++.+++ +||+|++. ..++.|+++.+.. .+|+.|.+....+ ..|
T Consensus 207 TDGiDi~~------------s~nV~I~n~~I~~gD-DcIaiksg----s~ni~I~~~~C~~-gHGisIGS~g~~~~~~~V 268 (409)
T PLN03010 207 TDGIDISY------------STNINIFDSTIQTGD-DCIAINSG----SSNINITQINCGP-GHGISVGSLGADGANAKV 268 (409)
T ss_pred CCceeeec------------cceEEEEeeEEecCC-CeEEecCC----CCcEEEEEEEeEC-cCCEEEccCCCCCCCCee
Confidence 57777765 899999999999998 99999974 4578888888864 5899999975322 469
Q ss_pred ecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccC------------CCCeee
Q 011659 339 KDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA------------GDPFTG 406 (480)
Q Consensus 339 ~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~------------~~~i~~ 406 (480)
+||+|+|+++.+..++++|+... .+.+.++||+|+||++.+++.|+.|.... ...++|
T Consensus 269 ~nV~v~n~~i~~t~~GirIKt~~----------G~~G~v~nItf~nI~m~~v~~pI~I~q~Y~~~~~~~~~~~s~v~Isd 338 (409)
T PLN03010 269 SDVHVTHCTFNQTTNGARIKTWQ----------GGQGYARNISFENITLINTKNPIIIDQQYIDKGKLDATKDSAVAISN 338 (409)
T ss_pred EEEEEEeeEEeCCCcceEEEEec----------CCCEEEEEeEEEeEEEecCCccEEEEeeccCCCCCCCCCCCceEEEe
Confidence 99999999999999999999752 22358999999999999999898875421 125899
Q ss_pred EEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCCCCCCCCCcCCCCCCCCccceeeeeeee
Q 011659 407 ICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474 (480)
Q Consensus 407 i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 474 (480)
|+|+||+.+.+ ......+.|+...++.+..+...-+..++... ....|.+..+..-....+. .|+
T Consensus 339 i~~~ni~GT~~-~~~~i~l~Cs~~~pC~ni~~~~v~l~~~~g~~-~~~~C~nv~g~~~~~~~~~-~C~ 403 (409)
T PLN03010 339 VKYVGFRGTTS-NENAITLKCSAITHCKDVVMDDIDVTMENGEK-PKVECQNVEGESSDTDLMR-DCF 403 (409)
T ss_pred EEEEeeEEEeC-CCccEEEEeCCCCCEeceEEEEEEEEecCCCc-cceEeeCccccccCCCCCC-ccc
Confidence 99999999876 34567788876655544333222222222111 2468999877766666666 686
No 13
>PLN02218 polygalacturonase ADPG
Probab=99.89 E-value=7.9e-22 Score=201.67 Aligned_cols=240 Identities=15% Similarity=0.139 Sum_probs=180.9
Q ss_pred EEEEEeeecEEEEe---EEEEeCC-------------------CceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCc
Q 011659 191 LIEIMYSQNIQISN---LTLINSP-------------------SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT 248 (480)
Q Consensus 191 ~i~~~~~~nv~I~~---v~i~ns~-------------------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~ 248 (480)
.|.+.+.+|++|++ =+|.... ...+.+..|+|++|+++++.+++. ..+++..|+
T Consensus 149 wi~~~~~~ni~I~G~~~GtIDG~G~~WW~~~~~~~~~~~~~~rP~~i~f~~~~nv~I~gitl~nSp~----w~i~~~~~~ 224 (431)
T PLN02218 149 WIMFDGVNNLSVDGGSTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLRVRNAQQ----IQISIEKCS 224 (431)
T ss_pred CEEEecCcEEEEECCCCcEEeCCchhhhhcccccCCcCccCcCCEEEEEEccccEEEeCeEEEcCCC----EEEEEEcee
Confidence 58888999999988 2332111 124778999999999999999763 348999999
Q ss_pred cEEEEecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC
Q 011659 249 NTRIEDCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 249 nV~I~n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~ 323 (480)
||+|+|.+|.+ ..|+|.+.+ ++||+|+||++.+++ +||+|++ +.+||+|+||++.. .
T Consensus 225 nV~i~~v~I~a~~~spNTDGIdi~s------------s~nV~I~n~~I~tGD-DcIaIks----gs~nI~I~n~~c~~-G 286 (431)
T PLN02218 225 NVQVSNVVVTAPADSPNTDGIHITN------------TQNIRVSNSIIGTGD-DCISIES----GSQNVQINDITCGP-G 286 (431)
T ss_pred eEEEEEEEEeCCCCCCCCCcEeecc------------cceEEEEccEEecCC-ceEEecC----CCceEEEEeEEEEC-C
Confidence 99999999986 467787766 899999999999998 9999997 47899999999964 6
Q ss_pred ceEEEEeecCC--CCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccC-
Q 011659 324 SGVRIKTAVGR--GGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA- 400 (480)
Q Consensus 324 ~Gi~i~s~~~~--~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~- 400 (480)
+|+.|.|...+ .+.|+||+|+|+++.+..++++|+.. +.+.+.++||+|+||++.+++.|+.|....
T Consensus 287 HGisIGS~g~~~~~~~V~nV~v~n~~~~~t~nGvRIKT~----------~Gg~G~v~nI~f~ni~m~~V~~pI~Idq~Y~ 356 (431)
T PLN02218 287 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY----------QGGSGTASNIIFQNIQMENVKNPIIIDQDYC 356 (431)
T ss_pred CCEEECcCCCCCCCceEEEEEEEccEEecCCcceEEeec----------CCCCeEEEEEEEEeEEEEcccccEEEEeecc
Confidence 89999987532 36899999999999999999999974 223469999999999999998888776431
Q ss_pred ----------CCCeeeEEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCCCCCCCCCcCCCCCCCCccceee
Q 011659 401 ----------GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMG 469 (480)
Q Consensus 401 ----------~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 469 (480)
...++||+|+||+.+.+. .....+.|+...++.+..+-..-... . .+.|++..+.......+
T Consensus 357 ~~~~~~~~~s~v~I~nI~~~NI~gtsa~-~~ai~l~cs~~~pc~nI~l~nV~i~~----~--~~~c~n~~~~~~~~~~p 428 (431)
T PLN02218 357 DKSKCTSQQSAVQVKNVVYRNISGTSAS-DVAITFNCSKNYPCQGIVLDNVNIKG----G--KATCTNANVVDKGAVSP 428 (431)
T ss_pred CCCCCCCCCCCeEEEEEEEEeEEEEecC-CcEEEEEECCCCCEeeEEEEeEEEEC----C--eeeEEEeeEEEcccCCC
Confidence 234999999999998762 33455666654433322222111111 1 35788876655554444
No 14
>PLN02155 polygalacturonase
Probab=99.88 E-value=3.9e-21 Score=194.47 Aligned_cols=250 Identities=14% Similarity=0.156 Sum_probs=185.8
Q ss_pred EEEEEeeecEEEEeEEEEeCCC-----------------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEE
Q 011659 191 LIEIMYSQNIQISNLTLINSPS-----------------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~-----------------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 253 (480)
.+.|.+.+++.|.+=+| +... ..+.+..|++++|+++++.+++. .-+++..|+||+|+
T Consensus 108 wi~~~~~~~i~i~GG~i-DGqG~~ww~~~~~~~~~~~~p~~i~~~~~~nv~i~gitl~nSp~----w~i~~~~~~nv~i~ 182 (394)
T PLN02155 108 WILFNKVNRFSLVGGTF-DARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQV----SHMTLNGCTNVVVR 182 (394)
T ss_pred eEEEECcCCCEEEccEE-ecCceeEEEcccCCCCCCCcccceeEEEeeeEEEECeEEEcCCC----eEEEEECeeeEEEE
Confidence 57888888999888433 3211 13788999999999999998753 34889999999999
Q ss_pred ecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEE
Q 011659 254 DCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328 (480)
Q Consensus 254 n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i 328 (480)
|..|.+ ..|+|.+.+ ++||+|+||++.+++ ++|+|++ +.+||+|+||++.. .+|+.|
T Consensus 183 ~v~I~~p~~~~NtDGidi~~------------s~nV~I~~~~I~~gD-DcIaik~----gs~nI~I~n~~c~~-GhGisI 244 (394)
T PLN02155 183 NVKLVAPGNSPNTDGFHVQF------------STGVTFTGSTVQTGD-DCVAIGP----GTRNFLITKLACGP-GHGVSI 244 (394)
T ss_pred EEEEECCCCCCCCCcccccc------------ceeEEEEeeEEecCC-ceEEcCC----CCceEEEEEEEEEC-CceEEe
Confidence 999986 236777665 899999999999998 9999986 46899999999976 589999
Q ss_pred EeecC--CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccC------
Q 011659 329 KTAVG--RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIA------ 400 (480)
Q Consensus 329 ~s~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~------ 400 (480)
.|... ..+.|+||+++|+++.+..++++||.... .+.+.++||+|+||++.+++.|+.|....
T Consensus 245 GS~g~~~~~~~V~nV~v~n~~~~~t~~GirIKT~~~---------~~gG~v~nI~f~ni~m~~v~~pI~i~q~Y~~~~~~ 315 (394)
T PLN02155 245 GSLAKELNEDGVENVTVSSSVFTGSQNGVRIKSWAR---------PSTGFVRNVFFQDLVMKNVENPIIIDQNYCPTHEG 315 (394)
T ss_pred ccccccCCCCcEEEEEEEeeEEeCCCcEEEEEEecC---------CCCEEEEEEEEEeEEEcCccccEEEEecccCCCCC
Confidence 99732 25789999999999999999999996421 22368999999999999998888775311
Q ss_pred ------CCCeeeEEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCCCCCCCCCcCCCCCCCCccceeeeeeee
Q 011659 401 ------GDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQMCS 474 (480)
Q Consensus 401 ------~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 474 (480)
...++||+|+||+.+.+. .....+.|+...++.+..+-..-..++.... ....|++..+.......|. .|+
T Consensus 316 ~~~~~s~v~i~~It~~ni~gt~~~-~~a~~l~c~~~~pc~~I~l~nv~i~~~~~~~-~~~~C~n~~G~~~~~~~p~-~c~ 392 (394)
T PLN02155 316 CPNEYSGVKISQVTYKNIQGTSAT-QEAMKLVCSKSSPCTGITLQDIKLTYNKGTP-ATSFCFNAVGKSLGVIQPT-SCL 392 (394)
T ss_pred CcCCCCCeEEEEEEEEeeEEEecC-CceEEEEeCCCCCEEEEEEEeeEEEecCCCc-cCcEEeccEeEEcccCCcc-ccc
Confidence 135999999999998762 3344566665443332222211112222121 2468999877766655666 786
Q ss_pred e
Q 011659 475 Y 475 (480)
Q Consensus 475 ~ 475 (480)
+
T Consensus 393 ~ 393 (394)
T PLN02155 393 N 393 (394)
T ss_pred C
Confidence 4
No 15
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=99.88 E-value=1.2e-20 Score=191.69 Aligned_cols=251 Identities=16% Similarity=0.169 Sum_probs=185.2
Q ss_pred EEEEEeeecEEEEeEEEEeCCC-------------------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEE
Q 011659 191 LIEIMYSQNIQISNLTLINSPS-------------------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTR 251 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~-------------------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~ 251 (480)
.+.|.+++|++|.+--..+... ..+.+..|+++.|+++++.+++. ..+++..|++|+
T Consensus 115 ~i~~~~~~ni~I~G~G~IDG~G~~ww~~~~~~~~~~~~~rP~~i~f~~~~nv~i~gitl~nSp~----w~i~~~~~~~v~ 190 (404)
T PLN02188 115 WIEFGWVNGLTLTGGGTFDGQGAAAWPFNKCPIRKDCKLLPTSVKFVNMNNTVVRGITSVNSKF----FHIALVECRNFK 190 (404)
T ss_pred eEEEeceeeEEEEeeEEEeCCCcccccccccccCCCCCcCceEEEEEeeeeEEEeCeEEEcCCC----eEEEEEccccEE
Confidence 4667778899998854444321 23678899999999999999763 348999999999
Q ss_pred EEecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceE
Q 011659 252 IEDCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326 (480)
Q Consensus 252 I~n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi 326 (480)
|++..|.+ ..|+|.+.+ ++||+|+||++.+++ +||+|++ +.+||+|+|+.+.. .+|+
T Consensus 191 i~~v~I~~~~~spNtDGidi~~------------s~nV~I~n~~I~~GD-DcIaiks----g~~nI~I~n~~c~~-ghGi 252 (404)
T PLN02188 191 GSGLKISAPSDSPNTDGIHIER------------SSGVYISDSRIGTGD-DCISIGQ----GNSQVTITRIRCGP-GHGI 252 (404)
T ss_pred EEEEEEeCCCCCCCCCcEeeeC------------cccEEEEeeEEeCCC-cEEEEcc----CCccEEEEEEEEcC-CCcE
Confidence 99999986 457787766 899999999999998 9999986 34699999999954 5899
Q ss_pred EEEeecC--CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEecc-----
Q 011659 327 RIKTAVG--RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI----- 399 (480)
Q Consensus 327 ~i~s~~~--~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~----- 399 (480)
.|.|... ..+.|+||+|+|+++.+..++++|+..... .+.+.++||+|+||++.++..|+.|...
T Consensus 253 siGSlG~~~~~~~V~nV~v~n~~~~~t~~GiriKt~~g~--------~~~G~v~nI~f~ni~m~~v~~pI~i~~~Y~~~~ 324 (404)
T PLN02188 253 SVGSLGRYPNEGDVTGLVVRDCTFTGTTNGIRIKTWANS--------PGKSAATNMTFENIVMNNVTNPIIIDQKYCPFY 324 (404)
T ss_pred EeCCCCCCCcCCcEEEEEEEeeEEECCCcEEEEEEecCC--------CCceEEEEEEEEeEEecCccceEEEEccccCCC
Confidence 9988532 236799999999999999999999975321 1125899999999999999888887531
Q ss_pred -------CCCCeeeEEEEeEEEEecCCCCccceeEeeeeccCCcccCCCCCCCCCCCCCCCCcCCCCCCCCccceeeeee
Q 011659 400 -------AGDPFTGICISNVTIELTNKPKKLQWNCTDITGISSGVTPKPCELLPDHEPAQTTECNFPDNRLPVENMGVQM 472 (480)
Q Consensus 400 -------~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 472 (480)
....++||+|+||+.+.+ ......+.|+...++.+..+-..-..++.........|.+..+.+.....|. +
T Consensus 325 ~~~~~~~s~v~I~nIt~~nI~gt~~-~~~a~~l~cs~~~pc~ni~~~nV~i~~~~g~~~~~~~C~nv~g~~~g~~~p~-~ 402 (404)
T PLN02188 325 SCESKYPSGVTLSDIYFKNIRGTSS-SQVAVLLKCSRGVPCQGVYLQDVHLDLSSGEGGTSSSCENVRAKYIGTQIPP-P 402 (404)
T ss_pred CCCcCCCCCcEEEeEEEEEEEEEec-CceEEEEEECCCCCEeeEEEEeeEEEecCCCCCcCceeEcceeEEcccCcCC-C
Confidence 124589999999999875 2334456676544433322222212222221222368999888777666664 5
Q ss_pred e
Q 011659 473 C 473 (480)
Q Consensus 473 ~ 473 (480)
|
T Consensus 403 C 403 (404)
T PLN02188 403 C 403 (404)
T ss_pred C
Confidence 6
No 16
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=99.87 E-value=3.8e-21 Score=182.32 Aligned_cols=220 Identities=24% Similarity=0.350 Sum_probs=126.5
Q ss_pred eEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeee-eecccccceEEEeeC-cEEEe-cCCCCCCC
Q 011659 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG-SFNLTSHFTLFLHKD-AVLLA-SQDEKEWP 128 (480)
Q Consensus 52 ~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~-~l~l~sn~~l~~~~g-a~i~~-~~~~~~~~ 128 (480)
.+||+||||+|||++|||+|||+||+++.+ .++++|+||+|+|++. ++.++++++|..+.+ .+++. ......+.
T Consensus 1 ~inv~~fGa~~dG~tDdt~Aiq~Ai~~~~~---~~g~~v~~P~G~Y~i~~~l~~~s~v~l~G~g~~~~~~~~~~~~~~~~ 77 (225)
T PF12708_consen 1 FINVTDFGAKGDGVTDDTAAIQAAIDAAAA---AGGGVVYFPPGTYRISGTLIIPSNVTLRGAGGNSTILFLSGSGDSFS 77 (225)
T ss_dssp EEEGGGGT--TEEEEE-HHHHHHHHHHHCS---TTSEEEEE-SEEEEESS-EEE-TTEEEEESSTTTEEEEECTTTSTSC
T ss_pred CcceeecCcCCCCChhHHHHHHHhhhhccc---CCCeEEEEcCcEEEEeCCeEcCCCeEEEccCCCeeEEEecCcccccc
Confidence 489999999999999999999999966554 7899999999999988 599999999999765 34443 22221111
Q ss_pred CCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEE
Q 011659 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLI 208 (480)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ 208 (480)
..........+ ...+. ..++|++|.|. +... ......+.+..++++.|+++++.
T Consensus 78 ~~~~~~~~~~~--------~~~~~-~~i~nl~i~~~-------~~~~----------~~~~~~i~~~~~~~~~i~nv~~~ 131 (225)
T PF12708_consen 78 VVPGIGVFDSG--------NSNIG-IQIRNLTIDGN-------GIDP----------NNNNNGIRFNSSQNVSISNVRIE 131 (225)
T ss_dssp CEEEEEECCSC--------SCCEE-EEEEEEEEEET-------CGCE-----------SCEEEEEETTEEEEEEEEEEEE
T ss_pred cccceeeeecC--------CCCce-EEEEeeEEEcc-------cccC----------CCCceEEEEEeCCeEEEEeEEEE
Confidence 00000000000 00000 12455566553 2110 01134678888888999999998
Q ss_pred eCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCC-CccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEE
Q 011659 209 NSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS-CTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIR 287 (480)
Q Consensus 209 ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~-s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~ 287 (480)
++...++.+..++...+.+.... .++.+.. +.++.+.++.+..+++++.. + .+++.|+
T Consensus 132 ~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~-----------~~~~~i~ 190 (225)
T PF12708_consen 132 NSGGDGIYFNTGTDYRIIGSTHV--------SGIFIDNGSNNVIVNNCIFNGGDNGIIL--G-----------NNNITIS 190 (225)
T ss_dssp S-SS-SEEEECCEECEEECCEEE--------EEEEEESCEEEEEEECEEEESSSCSEEC--E-----------EEEEEEE
T ss_pred ccCccEEEEEccccCcEeecccc--------eeeeeccceeEEEECCccccCCCceeEe--e-----------cceEEEE
Confidence 88777777775554444333222 1233332 34566677777766666321 1 3677777
Q ss_pred EEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceE
Q 011659 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGV 326 (480)
Q Consensus 288 n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi 326 (480)
||.+....+.||.+.. ..++.++|++|.++..|+
T Consensus 191 n~~~~~~~~~gi~i~~-----~~~~~i~n~~i~~~~~g~ 224 (225)
T PF12708_consen 191 NNTFEGNCGNGINIEG-----GSNIIISNNTIENCDDGI 224 (225)
T ss_dssp CEEEESSSSESEEEEE-----CSEEEEEEEEEESSSEEE
T ss_pred eEEECCccceeEEEEC-----CeEEEEEeEEEECCccCc
Confidence 7777763335666643 223666666666666554
No 17
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=99.83 E-value=6.3e-19 Score=176.29 Aligned_cols=198 Identities=21% Similarity=0.228 Sum_probs=158.5
Q ss_pred CeEEEEEeeecEEEEe-EEEEeCC-----------------CceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccE
Q 011659 189 PYLIEIMYSQNIQISN-LTLINSP-----------------SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250 (480)
Q Consensus 189 p~~i~~~~~~nv~I~~-v~i~ns~-----------------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV 250 (480)
..+|.+.+++|+.|.+ =+|.... ...+.+..|++++|+++++.+++. ..+++..|+||
T Consensus 51 ~~~i~~~~~~ni~i~G~G~IDG~G~~w~~~~~~~~~~~~~rp~~i~~~~~~~~~i~~i~~~nsp~----w~~~~~~~~nv 126 (326)
T PF00295_consen 51 SALIYAENAENITITGKGTIDGNGQAWWDGSGDANNNGQRRPRLIRFNNCKNVTIEGITIRNSPF----WHIHINDCDNV 126 (326)
T ss_dssp SEEEEEESEEEEECTTSSEEE--GGGTCSSCTTHCCSSSSSSESEEEEEEEEEEEESEEEES-SS----ESEEEESEEEE
T ss_pred cEEEEEEceEEEEecCCceEcCchhhhhccccccccccccccceeeeeeecceEEEeeEecCCCe----eEEEEEccCCe
Confidence 4578999999999987 3333111 123788999999999999999763 34888899999
Q ss_pred EEEecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCce
Q 011659 251 RIEDCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG 325 (480)
Q Consensus 251 ~I~n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~G 325 (480)
+|++..|.+ ..|+|.+.+ ++||+|+||.+.+.+ ++|++++.. .||+|+||++.+ .+|
T Consensus 127 ~i~~i~I~~~~~~~NtDGid~~~------------s~nv~I~n~~i~~gD-D~Iaiks~~----~ni~v~n~~~~~-ghG 188 (326)
T PF00295_consen 127 TISNITINNPANSPNTDGIDIDS------------SKNVTIENCFIDNGD-DCIAIKSGS----GNILVENCTCSG-GHG 188 (326)
T ss_dssp EEESEEEEEGGGCTS--SEEEES------------EEEEEEESEEEESSS-ESEEESSEE----CEEEEESEEEES-SSE
T ss_pred EEcceEEEecCCCCCcceEEEEe------------eeEEEEEEeeccccc-Ccccccccc----cceEEEeEEEec-ccc
Confidence 999999986 357888865 899999999999998 999999744 399999999975 489
Q ss_pred EEEEeecCCC--CceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEecc----
Q 011659 326 VRIKTAVGRG--GFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGI---- 399 (480)
Q Consensus 326 i~i~s~~~~~--g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~---- 399 (480)
+.|.+....+ ..|+||+|+|+++.+..++++|+.. +.+.+.++||+|+||++++...|+.+...
T Consensus 189 isiGS~~~~~~~~~i~nV~~~n~~i~~t~~gi~iKt~----------~~~~G~v~nI~f~ni~~~~v~~pi~i~~~y~~~ 258 (326)
T PF00295_consen 189 ISIGSEGSGGSQNDIRNVTFENCTIINTDNGIRIKTW----------PGGGGYVSNITFENITMENVKYPIFIDQDYRDG 258 (326)
T ss_dssp EEEEEESSSSE--EEEEEEEEEEEEESESEEEEEEEE----------TTTSEEEEEEEEEEEEEEEESEEEEEEEEECTT
T ss_pred ceeeeccCCccccEEEeEEEEEEEeeccceEEEEEEe----------cccceEEeceEEEEEEecCCceEEEEEeccccc
Confidence 9999875322 3699999999999999999999974 23346999999999999999888876531
Q ss_pred -------CCCCeeeEEEEeEEEEecC
Q 011659 400 -------AGDPFTGICISNVTIELTN 418 (480)
Q Consensus 400 -------~~~~i~~i~~~ni~~~~~~ 418 (480)
....++||+|+||+.+...
T Consensus 259 ~~~~~~~~~~~i~nI~~~nitg~~~~ 284 (326)
T PF00295_consen 259 GPCGKPPSGVSISNITFRNITGTSAG 284 (326)
T ss_dssp EESSCSSSSSEEEEEEEEEEEEEEST
T ss_pred cccCcccCCceEEEEEEEeeEEEecc
Confidence 1235999999999999863
No 18
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=99.80 E-value=4.5e-17 Score=164.27 Aligned_cols=271 Identities=18% Similarity=0.258 Sum_probs=159.4
Q ss_pred CcEEEeCCCeeeeee---ecccccc-eEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEe
Q 011659 87 GSQLFVPPGKWLTGS---FNLTSHF-TLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVIT 162 (480)
Q Consensus 87 g~~v~iP~G~Y~~~~---l~l~sn~-~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~ 162 (480)
-.+|||+||+|.++. +.|++++ +++|++||.+++. +.+....+|+.|.
T Consensus 232 ~~~lYF~PGVy~ig~~~~l~L~sn~~~VYlApGAyVkGA----------------------------f~~~~~~~nv~i~ 283 (582)
T PF03718_consen 232 KDTLYFKPGVYWIGSDYHLRLPSNTKWVYLAPGAYVKGA----------------------------FEYTDTQQNVKIT 283 (582)
T ss_dssp SSEEEE-SEEEEEBCTC-EEE-TT--EEEE-TTEEEES-----------------------------EEE---SSEEEEE
T ss_pred cceEEeCCceEEeCCCccEEECCCccEEEEcCCcEEEEE----------------------------EEEccCCceEEEE
Confidence 469999999999874 8999986 8999999987752 2333678999999
Q ss_pred CccceEeCCChhhhhhhccCCC------CcC--CCeEEE---EEeeecEEEEeEEEEeCCCceEEEeccc----cEEEEe
Q 011659 163 GDNGTIDGQGELWWRKFRAGEL------KYT--RPYLIE---IMYSQNIQISNLTLINSPSWNVHPVYSS----SVIVQG 227 (480)
Q Consensus 163 G~~G~idG~g~~~w~~~~~~~~------~~~--~p~~i~---~~~~~nv~I~~v~i~ns~~~~i~~~~~~----nv~i~~ 227 (480)
|. |+++|....|-........ ... .-+++. ...+.++.++|++|.++|+|.+.+..-+ +..|+|
T Consensus 284 G~-GVLSGe~Yvy~A~~~e~y~~~s~A~~~~~~~lkm~~~~~~~g~q~~~~~GiTI~~pP~~Sm~l~g~~~~~~~~~i~n 362 (582)
T PF03718_consen 284 GR-GVLSGEQYVYEADTEESYLHLSGAVKCHRESLKMLWHISANGGQTLTCEGITINDPPFHSMDLYGNENDKFSMNISN 362 (582)
T ss_dssp SS-SEEE-TTS-TTBBCCCTTSB-SSC---TTTB--SEEECS-SSSEEEEEES-EEE--SS-SEEEESSSGGGEEEEEEE
T ss_pred ee-EEEcCcceeEeccCCCCccccccccccchhhhhhhhhhccCCcceEEEEeeEecCCCcceEEecCCccccccceeec
Confidence 97 9999977665322111100 001 112343 3456699999999999999999998554 589999
Q ss_pred EEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC-cceEEEccccc
Q 011659 228 ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-SAVIALGSEMS 306 (480)
Q Consensus 228 ~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-~~gi~igs~~~ 306 (480)
.++.... ..++|||.+. ++-+|+||++++.||+|-+. -+++.|+||++|..+ +.-|.+|.. .
T Consensus 363 yKqVGaW-~~qtDGi~ly--~nS~i~dcF~h~nDD~iKlY-------------hS~v~v~~~ViWk~~Ngpiiq~GW~-p 425 (582)
T PF03718_consen 363 YKQVGAW-YFQTDGIELY--PNSTIRDCFIHVNDDAIKLY-------------HSNVSVSNTVIWKNENGPIIQWGWT-P 425 (582)
T ss_dssp EEEE----CTT----B----TT-EEEEEEEEESS-SEE---------------STTEEEEEEEEEE-SSS-SEE--CS--
T ss_pred eeeeeeE-EeccCCcccc--CCCeeeeeEEEecCchhhee-------------ecCcceeeeEEEecCCCCeEEeecc-c
Confidence 9999765 5789999985 77788999999999998654 379999999999754 233677765 4
Q ss_pred CceeEEEEEeeEEeCC---------CceEEEEeecC----CC------CceecEEEEeeEeccc-ceeEEEEeecCCCCC
Q 011659 307 GGIQDVRAEDITAIDS---------ESGVRIKTAVG----RG------GFVKDVYVRRMTMKTM-KWAFWITGSYGSHPD 366 (480)
Q Consensus 307 ~~v~nI~v~n~~~~~~---------~~Gi~i~s~~~----~~------g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~ 366 (480)
..+.|+.|+|+.+..+ ..+|...+..- .+ -.|++++|+|+++++. .-.++|.+.
T Consensus 426 r~isnv~veni~IIh~r~~~~~~~~n~~I~~ss~~y~~~~s~~~adp~~ti~~~~~~nv~~EG~~~~l~ri~pl------ 499 (582)
T PF03718_consen 426 RNISNVSVENIDIIHNRWIWHNNYVNTAILGSSPFYDDMASTKTADPSTTIRNMTFSNVRCEGMCPCLFRIYPL------ 499 (582)
T ss_dssp --EEEEEEEEEEEEE---SSGGCTTT-ECEEE--BTTS-SSS--BEEEEEEEEEEEEEEEEECCE-ECEEE--S------
T ss_pred cccCceEEeeeEEEeeeeecccCCCCceeEecccccccccCCCCCCcccceeeEEEEeEEEecccceeEEEeec------
Confidence 4799999999999876 23444433211 11 2479999999999995 445677642
Q ss_pred CCCCCCCCCeEEeEEEEEeEEe-----ccc---eeEE-Eecc---CCCCeeeEEEEeEEEEec
Q 011659 367 NNYDPHALPVIQNINYRDMVAE-----NVT---MAAR-LEGI---AGDPFTGICISNVTIELT 417 (480)
Q Consensus 367 ~~~~~~~~~~i~nIt~~nI~~~-----~~~---~~~~-i~g~---~~~~i~~i~~~ni~~~~~ 417 (480)
.-.+|+.++|+... ... ..+. ..+. ......+|.|+|.++...
T Consensus 500 --------qn~~nl~ikN~~~~~w~~~~~~~~~s~~k~~~~~~~~~~~~~~gi~i~N~tVgg~ 554 (582)
T PF03718_consen 500 --------QNYDNLVIKNVHFESWNGLDITSQVSGLKAYYNMANNKQNDTMGIIIENWTVGGE 554 (582)
T ss_dssp --------EEEEEEEEEEEEECEET-CGCSTT-EEE---CCTTT--B--EEEEEEEEEEETTE
T ss_pred --------CCCcceEEEEeecccccCcccccceeeccccccccccccccccceEEEeEEECCE
Confidence 23455666666554 111 1111 1112 123589999999999653
No 19
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.64 E-value=1.3e-13 Score=136.84 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=28.9
Q ss_pred HHHHHHHhhhcccCCCcEEEeCCCeeee-eeeccc-ccceEEEe
Q 011659 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLT-SHFTLFLH 113 (480)
Q Consensus 72 iq~Ai~~~~~~~~~~g~~v~iP~G~Y~~-~~l~l~-sn~~l~~~ 113 (480)
||+|+++| +.|.+|++|+|+|.. ++|.+. ++++|..+
T Consensus 1 iQ~Ai~~A-----~~GDtI~l~~G~Y~~~~~l~I~~~~Iti~G~ 39 (314)
T TIGR03805 1 LQEALIAA-----QPGDTIVLPEGVFQFDRTLSLDADGVTIRGA 39 (314)
T ss_pred CHhHHhhC-----CCCCEEEECCCEEEcceeEEEeCCCeEEEec
Confidence 69999998 468999999999975 466665 66666543
No 20
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=1e-12 Score=136.39 Aligned_cols=151 Identities=18% Similarity=0.203 Sum_probs=129.2
Q ss_pred CCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCC----ceeeecCCCCccCcccCCCceeEEE
Q 011659 211 PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD----DCVAVKSGWDQYGIAYGMPTKQLII 286 (480)
Q Consensus 211 ~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gd----D~iai~sg~~~~g~~~~~~~~ni~I 286 (480)
+...+.+..|+||.+++++|.+++ -.++|+..|+|++++|..|.+.+ |++.+.+ |+|++|
T Consensus 237 rp~~~~l~~c~NV~~~g~~i~ns~----~~~~h~~~~~nl~~~nl~I~~~~~~NtDG~d~~s------------c~NvlI 300 (542)
T COG5434 237 RPRTVVLKGCRNVLLEGLNIKNSP----LWTVHPVDCDNLTFRNLTIDANRFDNTDGFDPGS------------CSNVLI 300 (542)
T ss_pred CCceEEEeccceEEEeeeEecCCC----cEEEeeecccCceecceEEECCCCCCCCcccccc------------ceeEEE
Confidence 345789999999999999999975 37799999999999999998744 4666655 999999
Q ss_pred EEEEEeCCCcceEEEccccc-------CceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEEe
Q 011659 287 RRLTCISPFSAVIALGSEMS-------GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITG 359 (480)
Q Consensus 287 ~n~~~~~~~~~gi~igs~~~-------~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~ 359 (480)
++|+|...+ ++|++++... +..++|+|+||.|.....++.+.++. +|.|+||++||+.|.+..++++|+.
T Consensus 301 ~~~~fdtgD-D~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse~--~ggv~ni~ved~~~~~~d~GLRikt 377 (542)
T COG5434 301 EGCRFDTGD-DCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSEM--GGGVQNITVEDCVMDNTDRGLRIKT 377 (542)
T ss_pred eccEEecCC-ceEEeecccCCcccccccccccEEEecceecccccceEeeeec--CCceeEEEEEeeeeccCcceeeeee
Confidence 999999988 9999998743 23689999999998776778888885 7899999999999999999999997
Q ss_pred ecCCCCCCCCCCCCCCeEEeEEEEEeEEecc
Q 011659 360 SYGSHPDNNYDPHALPVIQNINYRDMVAENV 390 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~ 390 (480)
.. .+.+.++||+|+++.+.++
T Consensus 378 ~~----------~~gG~v~nI~~~~~~~~nv 398 (542)
T COG5434 378 ND----------GRGGGVRNIVFEDNKMRNV 398 (542)
T ss_pred ec----------ccceeEEEEEEecccccCc
Confidence 53 2336899999999998776
No 21
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.28 E-value=2.5e-10 Score=113.47 Aligned_cols=164 Identities=20% Similarity=0.233 Sum_probs=127.0
Q ss_pred eeceEEeCccc----eEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEE
Q 011659 156 LTDVVITGDNG----TIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITIL 231 (480)
Q Consensus 156 ~~nv~I~G~~G----~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~ 231 (480)
.++|+|+|. | +||+.++. .....+ ...+++|+|+++++.++..+++.+..|++++|+++++.
T Consensus 31 ~~~Iti~G~-g~~~tvid~~~~~------------~~~~~i-~v~a~~VtI~~ltI~~~~~~GI~v~~s~~i~I~n~~i~ 96 (314)
T TIGR03805 31 ADGVTIRGA-GMDETILDFSGQV------------GGAEGL-LVTSDDVTLSDLAVENTKGDGVKVKGSDGIIIRRLRVE 96 (314)
T ss_pred CCCeEEEec-CCCccEEecccCC------------CCCceE-EEEeCCeEEEeeEEEcCCCCeEEEeCCCCEEEEeeEEE
Confidence 378999996 5 37766541 112234 44689999999999999999999999999999999998
Q ss_pred CCCC---CCCCCeEecCCCccEEEEecEEeeC-CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC
Q 011659 232 APVT---SPNTDGINPDSCTNTRIEDCYIVSG-DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307 (480)
Q Consensus 232 ~~~~---~~n~DGI~~~~s~nV~I~n~~i~~g-dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~ 307 (480)
.... ....+||.+..|++++|++|.++.. |++|.+.. +++++|+||+++... .||.+-
T Consensus 97 ~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~------------s~~~~v~nN~~~~n~-~GI~i~----- 158 (314)
T TIGR03805 97 WTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASDAGIYVGQ------------SQNIVVRNNVAEENV-AGIEIE----- 158 (314)
T ss_pred eccCccccCCcceEEEeccCCEEEECCEEECCCcccEEECC------------CCCeEEECCEEccCc-ceEEEE-----
Confidence 5431 1357899999999999999999884 55788765 799999999999876 788885
Q ss_pred ceeEEEEEeeEEeCCCceEEEEeecCCC-CceecEEEEeeEeccc
Q 011659 308 GIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 308 ~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~nI~~~ni~~~~~ 351 (480)
...++.|+|+.+.+...|+.+...++.. ..-+++++++.++.+.
T Consensus 159 ~S~~~~v~~N~~~~N~~Gi~v~~~p~~~~~~s~~~~v~~N~i~~n 203 (314)
T TIGR03805 159 NSQNADVYNNIATNNTGGILVFDLPGLPQPGGSNVRVFDNIIFDN 203 (314)
T ss_pred ecCCcEEECCEEeccceeEEEeecCCCCcCCccceEEECCEEECC
Confidence 3567899999999988899886554321 2336777777777654
No 22
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=98.80 E-value=3.3e-07 Score=92.80 Aligned_cols=143 Identities=17% Similarity=0.123 Sum_probs=107.3
Q ss_pred EEEEEeeecEEEEeEEEEeCCC------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCce
Q 011659 191 LIEIMYSQNIQISNLTLINSPS------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDC 263 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~ 263 (480)
++.-..+++|+|++++|.++.. ..|++..|++++|++++|.++. .-||.++.|+ ..|.++.|.. .+..
T Consensus 108 lIiai~A~nVTIsGLtIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg----~FGI~L~~~~-~~I~~N~I~g~~~~~ 182 (455)
T TIGR03808 108 LLSSEGADGIGLSGLTLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSG----GNGIWLETVS-GDISGNTITQIAVTA 182 (455)
T ss_pred EEEEecCCCeEEEeeEEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCC----cceEEEEcCc-ceEecceEeccccce
Confidence 5667789999999999998763 4688999999999999999731 3789999998 7787777765 5555
Q ss_pred eeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEccc-------------------------cc------CceeEE
Q 011659 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSE-------------------------MS------GGIQDV 312 (480)
Q Consensus 264 iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~-------------------------~~------~~v~nI 312 (480)
|.+.. ++++.|+++++.....+||.|--. .. ....++
T Consensus 183 I~lw~------------S~g~~V~~N~I~g~RD~gi~i~r~~~~~dg~~v~~n~i~~i~a~~gg~~~~GNGI~~~~a~~v 250 (455)
T TIGR03808 183 IVSFD------------ALGLIVARNTIIGANDNGIEILRSAIGDDGTIVTDNRIEDIKAGPGGSGQYGNAINAFRAGNV 250 (455)
T ss_pred EEEec------------cCCCEEECCEEEccCCCCeEEEEeeecCCcceeeccccccccccCCCcCCccccEEEEccCCe
Confidence 55443 899999999999876456665411 00 125578
Q ss_pred EEEeeEEeCCC-ceEEEEeecCCCCceecEEEEeeEecccce-eEEE
Q 011659 313 RAEDITAIDSE-SGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWI 357 (480)
Q Consensus 313 ~v~n~~~~~~~-~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i 357 (480)
+|+++++.++. .||++.+. +|+.|++.+++++++ +++.
T Consensus 251 ~V~gN~I~~~r~dgI~~nss-------s~~~i~~N~~~~~R~~alhy 290 (455)
T TIGR03808 251 IVRGNRIRNCDYSAVRGNSA-------SNIQITGNSVSDVREVALYS 290 (455)
T ss_pred EEECCEEeccccceEEEEcc-------cCcEEECcEeeeeeeeEEEE
Confidence 88888888887 78888765 467777777777776 6543
No 23
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=98.77 E-value=1e-07 Score=84.57 Aligned_cols=141 Identities=19% Similarity=0.204 Sum_probs=100.8
Q ss_pred EEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCC
Q 011659 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~ 271 (480)
|.+....+++|++++|.+...+++.+..+..++|++++|.. ...|+.+....++++++|.+.....++.+..
T Consensus 3 i~i~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~i~n~~i~~-----~~~gi~~~~~~~~~i~~~~~~~~~~~i~~~~--- 74 (158)
T PF13229_consen 3 ISINNGSNVTIRNCTISNNGGDGIHVSGSSNITIENCTISN-----GGYGIYVSGGSNVTISNNTISDNGSGIYVSG--- 74 (158)
T ss_dssp EEETTCEC-EEESEEEESSSSECEEE-SSCESEEES-EEES-----STTSEEEECCES-EEES-EEES-SEEEECCS---
T ss_pred EEEECCcCeEEeeeEEEeCCCeEEEEEcCCCeEEECeEEEC-----CCcEEEEecCCCeEEECeEEEEccceEEEEe---
Confidence 67777888999999999999999999999999999999997 4678999988999999999998765565543
Q ss_pred ccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC-ceEEEEeecCCCCceecEEEEeeEecc
Q 011659 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE-SGVRIKTAVGRGGFVKDVYVRRMTMKT 350 (480)
Q Consensus 272 ~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i~s~~~~~g~v~nI~~~ni~~~~ 350 (480)
..+++|++|.+......||.+.. ...+++|++|+|.+.. .|+.+.... -.+++|++.++.+
T Consensus 75 ---------~~~~~i~~~~i~~~~~~gi~~~~----~~~~~~i~~n~~~~~~~~gi~~~~~~-----~~~~~i~~n~i~~ 136 (158)
T PF13229_consen 75 ---------SSNITIENNRIENNGDYGIYISN----SSSNVTIENNTIHNNGGSGIYLEGGS-----SPNVTIENNTISN 136 (158)
T ss_dssp ----------CS-EEES-EEECSSS-SCE-TC----EECS-EEES-EEECCTTSSCEEEECC-------S-EEECEEEEC
T ss_pred ---------cCCceecCcEEEcCCCccEEEec----cCCCEEEEeEEEEeCcceeEEEECCC-----CCeEEEEEEEEEe
Confidence 78999999999988745888862 2567999999999886 788886542 2357777777777
Q ss_pred cc-eeEEEE
Q 011659 351 MK-WAFWIT 358 (480)
Q Consensus 351 ~~-~~i~i~ 358 (480)
.. .++.+.
T Consensus 137 ~~~~gi~~~ 145 (158)
T PF13229_consen 137 NGGNGIYLI 145 (158)
T ss_dssp ESSEEEE-T
T ss_pred CcceeEEEE
Confidence 54 666554
No 24
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=98.70 E-value=2.5e-07 Score=86.57 Aligned_cols=121 Identities=16% Similarity=0.268 Sum_probs=80.6
Q ss_pred EEeeecEEEEeEEEEeCCC--c--------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEE
Q 011659 194 IMYSQNIQISNLTLINSPS--W--------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~--~--------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i 257 (480)
|+.|++++++|+++-+++- | .-.+..|+|+.++++.+.+. ..+++++||.|+|+.+
T Consensus 94 fR~~~~i~L~nv~~~~A~Et~W~c~~i~l~nv~~~gdYf~m~s~ni~id~l~~~Gn--------Y~Fq~~kNvei~ns~l 165 (277)
T PF12541_consen 94 FRECSNITLENVDIPDADETLWNCRGIKLKNVQANGDYFFMNSENIYIDNLVLDGN--------YSFQYCKNVEIHNSKL 165 (277)
T ss_pred hhcccCcEEEeeEeCCCcccCEEeCCeEEEeEEEeceEeeeeccceEEeceEEeCC--------EEeeceeeEEEEccEE
Confidence 4455666666666655432 1 01223455555555555532 4567899999999999
Q ss_pred eeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCc
Q 011659 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF 337 (480)
Q Consensus 258 ~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~ 337 (480)
.+.| |+ |+ ++||+|.|.++.+. -+|. ..+|+++.||++.+.+ | -.+
T Consensus 166 ~sKD---AF---Wn---------~eNVtVyDS~i~GE-----YLgW----~SkNltliNC~I~g~Q-p---------LCY 211 (277)
T PF12541_consen 166 DSKD---AF---WN---------CENVTVYDSVINGE-----YLGW----NSKNLTLINCTIEGTQ-P---------LCY 211 (277)
T ss_pred eccc---cc---cc---------CCceEEEcceEeee-----EEEE----EcCCeEEEEeEEeccC-c---------cEe
Confidence 9876 23 22 89999999999743 3442 5789999999997663 2 257
Q ss_pred eecEEEEeeEecccceeEE
Q 011659 338 VKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 338 v~nI~~~ni~~~~~~~~i~ 356 (480)
++|++.+|++|.++.-++.
T Consensus 212 ~~~L~l~nC~~~~tdlaFE 230 (277)
T PF12541_consen 212 CDNLVLENCTMIDTDLAFE 230 (277)
T ss_pred ecceEEeCcEeecceeeee
Confidence 8899999999998765543
No 25
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=98.60 E-value=3.9e-06 Score=86.02 Aligned_cols=171 Identities=18% Similarity=0.187 Sum_probs=99.7
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecCCCc----cEEEEecEEee----CCceeeecCCCCccCcccCCCceeEEEE
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPDSCT----NTRIEDCYIVS----GDDCVAVKSGWDQYGIAYGMPTKQLIIR 287 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~----nV~I~n~~i~~----gdD~iai~sg~~~~g~~~~~~~~ni~I~ 287 (480)
....+++.++++++|..++. ..+++.+.. +..|+|..... +.||+.+ .+|-+|+
T Consensus 324 ~~~g~q~~~~~GiTI~~pP~----~Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~l--------------y~nS~i~ 385 (582)
T PF03718_consen 324 SANGGQTLTCEGITINDPPF----HSMDLYGNENDKFSMNISNYKQVGAWYFQTDGIEL--------------YPNSTIR 385 (582)
T ss_dssp S-SSSEEEEEES-EEE--SS-----SEEEESSSGGGEEEEEEEEEEE---CTT----B----------------TT-EEE
T ss_pred ccCCcceEEEEeeEecCCCc----ceEEecCCccccccceeeceeeeeeEEeccCCccc--------------cCCCeee
Confidence 45678899999999998762 236665333 47888888764 5677766 4566889
Q ss_pred EEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccc---------eeEEEE
Q 011659 288 RLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK---------WAFWIT 358 (480)
Q Consensus 288 n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~---------~~i~i~ 358 (480)
||.++..+ ++|.+- ..++.++||+++...+|--|.... ....++||+|+|+.+-..+ .+|.-.
T Consensus 386 dcF~h~nD-D~iKlY------hS~v~v~~~ViWk~~Ngpiiq~GW-~pr~isnv~veni~IIh~r~~~~~~~~n~~I~~s 457 (582)
T PF03718_consen 386 DCFIHVND-DAIKLY------HSNVSVSNTVIWKNENGPIIQWGW-TPRNISNVSVENIDIIHNRWIWHNNYVNTAILGS 457 (582)
T ss_dssp EEEEEESS--SEE--------STTEEEEEEEEEE-SSS-SEE--C-S---EEEEEEEEEEEEE---SSGGCTTT-ECEEE
T ss_pred eeEEEecC-chhhee------ecCcceeeeEEEecCCCCeEEeec-cccccCceEEeeeEEEeeeeecccCCCCceeEec
Confidence 99999988 899773 478999999999987665454322 2467999999999887542 244433
Q ss_pred -eecCCCCCC-CCCCCCCCeEEeEEEEEeEEecc-ceeEEEeccCCCCeeeEEEEeEEEEe
Q 011659 359 -GSYGSHPDN-NYDPHALPVIQNINYRDMVAENV-TMAARLEGIAGDPFTGICISNVTIEL 416 (480)
Q Consensus 359 -~~~~~~~~~-~~~~~~~~~i~nIt~~nI~~~~~-~~~~~i~g~~~~~i~~i~~~ni~~~~ 416 (480)
..|.+-+.. ..+|+ -+|++++|+|++.++. ...+.|. +-..-+++.++|+.+..
T Consensus 458 s~~y~~~~s~~~adp~--~ti~~~~~~nv~~EG~~~~l~ri~--plqn~~nl~ikN~~~~~ 514 (582)
T PF03718_consen 458 SPFYDDMASTKTADPS--TTIRNMTFSNVRCEGMCPCLFRIY--PLQNYDNLVIKNVHFES 514 (582)
T ss_dssp --BTTS-SSS--BEEE--EEEEEEEEEEEEEECCE-ECEEE----SEEEEEEEEEEEEECE
T ss_pred ccccccccCCCCCCcc--cceeeEEEEeEEEecccceeEEEe--ecCCCcceEEEEeeccc
Confidence 344221111 01122 2789999999999876 2334443 44456788899998873
No 26
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=98.59 E-value=4.6e-07 Score=84.83 Aligned_cols=101 Identities=23% Similarity=0.211 Sum_probs=77.8
Q ss_pred EEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCC
Q 011659 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~ 271 (480)
-.+.+++|+.|+++.+.. .-.|++|+||.|+|.++.+.+ .++.|+||+|.|+.|...
T Consensus 131 Yf~m~s~ni~id~l~~~G----nY~Fq~~kNvei~ns~l~sKD--------AFWn~eNVtVyDS~i~GE----------- 187 (277)
T PF12541_consen 131 YFFMNSENIYIDNLVLDG----NYSFQYCKNVEIHNSKLDSKD--------AFWNCENVTVYDSVINGE----------- 187 (277)
T ss_pred EeeeeccceEEeceEEeC----CEEeeceeeEEEEccEEeccc--------ccccCCceEEEcceEeee-----------
Confidence 445566677777766643 246789999999999999764 356899999999998742
Q ss_pred ccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEE
Q 011659 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRI 328 (480)
Q Consensus 272 ~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i 328 (480)
..++.++|+++.||++.+.+ |+. .++|++++||+|.+++-++.-
T Consensus 188 ----YLgW~SkNltliNC~I~g~Q--pLC-------Y~~~L~l~nC~~~~tdlaFEy 231 (277)
T PF12541_consen 188 ----YLGWNSKNLTLINCTIEGTQ--PLC-------YCDNLVLENCTMIDTDLAFEY 231 (277)
T ss_pred ----EEEEEcCCeEEEEeEEeccC--ccE-------eecceEEeCcEeecceeeeee
Confidence 12233899999999999776 555 588999999999988766655
No 27
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=98.48 E-value=2.1e-06 Score=75.93 Aligned_cols=122 Identities=22% Similarity=0.198 Sum_probs=86.6
Q ss_pred eEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeC-CceeeecC
Q 011659 190 YLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSG-DDCVAVKS 268 (480)
Q Consensus 190 ~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~g-dD~iai~s 268 (480)
..|.+..+..++|++.+|.+ ...++.+....+++++++.+.... .|+.+..+.+++|++|.+... +.+|.+..
T Consensus 24 ~gi~~~~~~~~~i~n~~i~~-~~~gi~~~~~~~~~i~~~~~~~~~-----~~i~~~~~~~~~i~~~~i~~~~~~gi~~~~ 97 (158)
T PF13229_consen 24 DGIHVSGSSNITIENCTISN-GGYGIYVSGGSNVTISNNTISDNG-----SGIYVSGSSNITIENNRIENNGDYGIYISN 97 (158)
T ss_dssp ECEEE-SSCESEEES-EEES-STTSEEEECCES-EEES-EEES-S-----EEEECCS-CS-EEES-EEECSSS-SCE-TC
T ss_pred eEEEEEcCCCeEEECeEEEC-CCcEEEEecCCCeEEECeEEEEcc-----ceEEEEecCCceecCcEEEcCCCccEEEec
Confidence 35888888889999999999 778999999999999999999742 789999999999999999874 44777753
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC-ceEEEEee
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE-SGVRIKTA 331 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i~s~ 331 (480)
..++++|++|++....+.|+.+.... ..+++|++|++.+.. .|+.+...
T Consensus 98 -----------~~~~~~i~~n~~~~~~~~gi~~~~~~---~~~~~i~~n~i~~~~~~gi~~~~~ 147 (158)
T PF13229_consen 98 -----------SSSNVTIENNTIHNNGGSGIYLEGGS---SPNVTIENNTISNNGGNGIYLISG 147 (158)
T ss_dssp -----------EECS-EEES-EEECCTTSSCEEEECC-----S-EEECEEEECESSEEEE-TT-
T ss_pred -----------cCCCEEEEeEEEEeCcceeEEEECCC---CCeEEEEEEEEEeCcceeEEEECC
Confidence 15789999999998766788876422 347899999999875 77776543
No 28
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=98.38 E-value=8.3e-06 Score=78.03 Aligned_cols=134 Identities=19% Similarity=0.141 Sum_probs=68.5
Q ss_pred EEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCC
Q 011659 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~ 271 (480)
+.+..+++..|++.++.+.. .++.+..+++++|+++++.. +..||++..+++++|+++.+.....+|.+..
T Consensus 16 i~l~~~~~~~i~~n~i~~~~-~gi~~~~s~~~~I~~n~i~~-----~~~GI~~~~s~~~~i~~n~i~~n~~Gi~l~~--- 86 (236)
T PF05048_consen 16 IYLWNSSNNSIENNTISNSR-DGIYVENSDNNTISNNTISN-----NRYGIHLMGSSNNTIENNTISNNGYGIYLMG--- 86 (236)
T ss_pred EEEEeCCCCEEEcCEEEeCC-CEEEEEEcCCeEEEeeEEEC-----CCeEEEEEccCCCEEEeEEEEccCCCEEEEc---
Confidence 55555555555555554432 34455555556666665553 2455555555555566665555445555544
Q ss_pred ccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEeccc
Q 011659 272 QYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 272 ~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~ 351 (480)
+.+.+|+++++.... .||.+. ...+.+|+++++.+...||.+... .+.++++.++.+.
T Consensus 87 ---------s~~~~I~~N~i~~n~-~GI~l~-----~s~~~~I~~N~i~~~~~GI~l~~s-------~~n~I~~N~i~~n 144 (236)
T PF05048_consen 87 ---------SSNNTISNNTISNNG-YGIYLY-----GSSNNTISNNTISNNGYGIYLSSS-------SNNTITGNTISNN 144 (236)
T ss_pred ---------CCCcEEECCEecCCC-ceEEEe-----eCCceEEECcEEeCCCEEEEEEeC-------CCCEEECeEEeCC
Confidence 233355555555544 355443 233345555555544555555422 2344444444444
Q ss_pred -ceeEE
Q 011659 352 -KWAFW 356 (480)
Q Consensus 352 -~~~i~ 356 (480)
..+|.
T Consensus 145 ~~~Gi~ 150 (236)
T PF05048_consen 145 TDYGIY 150 (236)
T ss_pred CccceE
Confidence 44444
No 29
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=98.36 E-value=1.4e-05 Score=76.46 Aligned_cols=115 Identities=23% Similarity=0.144 Sum_probs=99.6
Q ss_pred EEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCC
Q 011659 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGW 270 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~ 270 (480)
.+.+.++.+++|++.++.+. .+++++..|++++|++..+.. +..||.+..+.+.+|+++.|.....+|.+..
T Consensus 37 gi~~~~s~~~~I~~n~i~~~-~~GI~~~~s~~~~i~~n~i~~-----n~~Gi~l~~s~~~~I~~N~i~~n~~GI~l~~-- 108 (236)
T PF05048_consen 37 GIYVENSDNNTISNNTISNN-RYGIHLMGSSNNTIENNTISN-----NGYGIYLMGSSNNTISNNTISNNGYGIYLYG-- 108 (236)
T ss_pred EEEEEEcCCeEEEeeEEECC-CeEEEEEccCCCEEEeEEEEc-----cCCCEEEEcCCCcEEECCEecCCCceEEEee--
Confidence 47899999999999999998 789999999999999999996 3489999988888999999998777888865
Q ss_pred CccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCC-CceEEEE
Q 011659 271 DQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIK 329 (480)
Q Consensus 271 ~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~-~~Gi~i~ 329 (480)
+.+.+|+++++.... .||.+.. ..+.+|++++|.+. ..|+.+.
T Consensus 109 ----------s~~~~I~~N~i~~~~-~GI~l~~-----s~~n~I~~N~i~~n~~~Gi~~~ 152 (236)
T PF05048_consen 109 ----------SSNNTISNNTISNNG-YGIYLSS-----SSNNTITGNTISNNTDYGIYFL 152 (236)
T ss_pred ----------CCceEEECcEEeCCC-EEEEEEe-----CCCCEEECeEEeCCCccceEEe
Confidence 677899999999655 7999863 36889999999988 7898843
No 30
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=98.33 E-value=3.1e-05 Score=73.53 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=54.9
Q ss_pred eEecCCCccEEEEecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEE
Q 011659 241 GINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITA 319 (480)
Q Consensus 241 GI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~ 319 (480)
|+.+.++ +.+|+||+|.. ..++|.+... .......++.|+++.+.... .||++.....+ ++ -.|+|+.+
T Consensus 116 Gi~Iess-~~tI~Nntf~~~~~~GI~v~g~------~~~~~i~~~vI~GN~~~~~~-~Gi~i~~~~~~-~~-n~I~NN~I 185 (246)
T PF07602_consen 116 GIWIESS-SPTIANNTFTNNGREGIFVTGT------SANPGINGNVISGNSIYFNK-TGISISDNAAP-VE-NKIENNII 185 (246)
T ss_pred EEEEecC-CcEEEeeEEECCccccEEEEee------ecCCcccceEeecceEEecC-cCeEEEcccCC-cc-ceeeccEE
Confidence 4444433 55555555544 3344444221 01123677888888888766 68888654433 33 35688888
Q ss_pred eCCCceEEEEeec---CCC--CceecEEEEeeEeccc
Q 011659 320 IDSESGVRIKTAV---GRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 320 ~~~~~Gi~i~s~~---~~~--g~v~nI~~~ni~~~~~ 351 (480)
.+...||.+.... |.+ +.+.+-+|++....+.
T Consensus 186 ~~N~~Gi~~~~~~pDlG~~s~~~~g~N~~~~N~~~Dl 222 (246)
T PF07602_consen 186 ENNNIGIVAIGDAPDLGTGSEGSPGNNIFRNNGRYDL 222 (246)
T ss_pred EeCCcCeEeeccCCccccCCCCCCCCcEEecCcceee
Confidence 8777787754221 111 2355455665554443
No 31
>PLN02480 Probable pectinesterase
Probab=98.30 E-value=0.00031 Score=70.26 Aligned_cols=132 Identities=13% Similarity=0.104 Sum_probs=73.7
Q ss_pred EEeeecEEEEeEEEEeCCC---------ceEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCce
Q 011659 194 IMYSQNIQISNLTLINSPS---------WNVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~---------~~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~ 263 (480)
....++++++|++|+|+.. -.+-+ ...+.+.|.+|++... .|-+... ...-..+||.|...=|-
T Consensus 128 tV~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~-----QDTLy~~-~gR~yf~~C~IeG~VDF 201 (343)
T PLN02480 128 TVEAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYST-----HNTLFDY-KGRHYYHSCYIQGSIDF 201 (343)
T ss_pred EEECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecc-----cceeEeC-CCCEEEEeCEEEeeeeE
Confidence 3356788999999998721 22333 4577788888888763 3434322 33466788888765442
Q ss_pred eeecCCCCccCcccCCCceeEEEEEEEEeCCCc------ceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC-C
Q 011659 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS------AVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-G 336 (480)
Q Consensus 264 iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~------~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g 336 (480)
| + | .-...++||++..... ..|...+.....-....|.||++.+.. .+.+ |+. +
T Consensus 202 I-F--G-----------~g~a~fe~C~i~s~~~~~~~~~G~ITA~~r~~~~~~GfvF~~C~i~g~g-~~yL----GRPW~ 262 (343)
T PLN02480 202 I-F--G-----------RGRSIFHNCEIFVIADRRVKIYGSITAHNRESEDNSGFVFIKGKVYGIG-EVYL----GRAKG 262 (343)
T ss_pred E-c--c-----------ceeEEEEccEEEEecCCCCCCceEEEcCCCCCCCCCEEEEECCEEcccC-ceee----ecCCC
Confidence 2 1 1 3456777777774310 123333222223346778888876642 1222 222 3
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|.|..|.+
T Consensus 263 ~ya~vVf~~t~l~~ 276 (343)
T PLN02480 263 AYSRVIFAKTYLSK 276 (343)
T ss_pred CcceEEEEecccCC
Confidence 45667777777665
No 32
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=98.21 E-value=0.00041 Score=70.56 Aligned_cols=26 Identities=19% Similarity=0.461 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCeee
Q 011659 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWL 98 (480)
Q Consensus 68 dT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~ 98 (480)
+.++||+||+.| .+|.+|+++.|+|.
T Consensus 3 s~~~lq~Ai~~a-----~pGD~I~L~~Gty~ 28 (425)
T PF14592_consen 3 SVAELQSAIDNA-----KPGDTIVLADGTYK 28 (425)
T ss_dssp SHHHHHHHHHH-------TT-EEEE-SEEEE
T ss_pred CHHHHHHHHHhC-----CCCCEEEECCceee
Confidence 568999999988 47899999999996
No 33
>smart00656 Amb_all Amb_all domain.
Probab=98.14 E-value=6.4e-05 Score=69.34 Aligned_cols=96 Identities=22% Similarity=0.266 Sum_probs=68.5
Q ss_pred EEEeccccEEEEeEEEECCCC--CCCCCeEecCCCccEEEEecEEeeC----------CceeeecCCCCccCcccCCCce
Q 011659 215 VHPVYSSSVIVQGITILAPVT--SPNTDGINPDSCTNTRIEDCYIVSG----------DDCVAVKSGWDQYGIAYGMPTK 282 (480)
Q Consensus 215 i~~~~~~nv~i~~~~i~~~~~--~~n~DGI~~~~s~nV~I~n~~i~~g----------dD~iai~sg~~~~g~~~~~~~~ 282 (480)
+.+..++||.|++++|+.... ..+.|+|.+..+++|.|++|.+..+ |..+.++.+ +.
T Consensus 34 l~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~-----------s~ 102 (190)
T smart00656 34 LTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNG-----------ST 102 (190)
T ss_pred EEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcc-----------cc
Confidence 344445666777777766432 1367899998899999999999876 344455554 89
Q ss_pred eEEEEEEEEeCCCcceEEEccccc---CceeEEEEEeeEEeCC
Q 011659 283 QLIIRRLTCISPFSAVIALGSEMS---GGIQDVRAEDITAIDS 322 (480)
Q Consensus 283 ni~I~n~~~~~~~~~gi~igs~~~---~~v~nI~v~n~~~~~~ 322 (480)
+++|++|.|..-+ -+.-+|+... ....+|++.+|.+.++
T Consensus 103 ~vTvs~~~f~~h~-~~~liG~~d~~~~~~~~~vT~h~N~~~~~ 144 (190)
T smart00656 103 YVTISNNYFHNHW-KVMLLGHSDSDTDDGKMRVTIAHNYFGNL 144 (190)
T ss_pred cEEEECceEecCC-EEEEEccCCCccccccceEEEECcEEcCc
Confidence 9999999998655 6788887432 2245799999999765
No 34
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=98.13 E-value=0.00013 Score=69.76 Aligned_cols=120 Identities=21% Similarity=0.131 Sum_probs=86.6
Q ss_pred EEEEeeecEEEEeEEEE-eCCCceEEEeccccEEEEeEEEECCCCC-CCCCeEec-CCCccEEEEecEEee---------
Q 011659 192 IEIMYSQNIQISNLTLI-NSPSWNVHPVYSSSVIVQGITILAPVTS-PNTDGINP-DSCTNTRIEDCYIVS--------- 259 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~-ns~~~~i~~~~~~nv~i~~~~i~~~~~~-~n~DGI~~-~~s~nV~I~n~~i~~--------- 259 (480)
+.+.-+.|.+|.++--. .-..|++.+...+||.|+|++|+..... ++-|+|.+ ..++|+.|++|++..
T Consensus 95 ~~iki~sNkTivG~g~~a~~~g~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h 174 (345)
T COG3866 95 ITIKIGSNKTIVGSGADATLVGGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSH 174 (345)
T ss_pred EEEeeccccEEEeeccccEEEeceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccC
Confidence 66777777777776521 1234778888888899999888875422 23488888 678899999999876
Q ss_pred CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEccccc----CceeEEEEEeeEEeCCC
Q 011659 260 GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS----GGIQDVRAEDITAIDSE 323 (480)
Q Consensus 260 gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~----~~v~nI~v~n~~~~~~~ 323 (480)
+|..+.++-+ +..|+|++|.|...+ -++-+|+... ++-.+|++.+|.|.+..
T Consensus 175 ~DGl~Dik~~-----------AnyITiS~n~fhdh~-Kssl~G~sD~~~~~~~~~kvT~hhNyFkn~~ 230 (345)
T COG3866 175 GDGLVDIKKD-----------ANYITISYNKFHDHD-KSSLLGSSDSSNYDDGKYKVTIHHNYFKNLY 230 (345)
T ss_pred CCccEEeccC-----------CcEEEEEeeeeecCC-eeeeeccCCcccccCCceeEEEecccccccc
Confidence 3444555554 889999999999766 6777887543 34567999999998763
No 35
>smart00656 Amb_all Amb_all domain.
Probab=98.08 E-value=0.00019 Score=66.21 Aligned_cols=128 Identities=13% Similarity=0.018 Sum_probs=87.3
Q ss_pred EEEEEeeecEEEEeEEEEeCCC------ceEEEeccccEEEEeEEEECCC----CCCCCCeE-ecC-CCccEEEEecEEe
Q 011659 191 LIEIMYSQNIQISNLTLINSPS------WNVHPVYSSSVIVQGITILAPV----TSPNTDGI-NPD-SCTNTRIEDCYIV 258 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~----~~~n~DGI-~~~-~s~nV~I~n~~i~ 258 (480)
.|.+..++||.|++++|++... .++.+..+++|.|++|++.... .....||. ++. .+.+|+|++|.|.
T Consensus 33 gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~ 112 (190)
T smart00656 33 GLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFH 112 (190)
T ss_pred EEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEe
Confidence 4777789999999999998633 6899999999999999999751 01124553 444 5789999999998
Q ss_pred eCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC-ceEEE
Q 011659 259 SGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE-SGVRI 328 (480)
Q Consensus 259 ~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i 328 (480)
..+-+..+.++.... .....+|++.+|.+.+..++.-.+. .+ .+.+-|+.+.+.. .++.+
T Consensus 113 ~h~~~~liG~~d~~~----~~~~~~vT~h~N~~~~~~~R~P~~r----~g--~~hv~NN~~~n~~~~~~~~ 173 (190)
T smart00656 113 NHWKVMLLGHSDSDT----DDGKMRVTIAHNYFGNLRQRAPRVR----FG--YVHVYNNYYTGWTSYAIGG 173 (190)
T ss_pred cCCEEEEEccCCCcc----ccccceEEEECcEEcCcccCCCccc----CC--EEEEEeeEEeCcccEeEec
Confidence 766555555531100 0013479999999976543333332 12 6888999998774 44333
No 36
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=98.07 E-value=0.00024 Score=68.04 Aligned_cols=148 Identities=17% Similarity=0.091 Sum_probs=101.5
Q ss_pred EEEeceeceEEeCc--cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCC-----CceEEE-ecccc
Q 011659 151 IFGTNLTDVVITGD--NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP-----SWNVHP-VYSSS 222 (480)
Q Consensus 151 i~~~~~~nv~I~G~--~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~-----~~~i~~-~~~~n 222 (480)
+....+.|.+|.|. ++++-|- .+.++...||.|+|++|...+ ...|.+ ...+|
T Consensus 95 ~~iki~sNkTivG~g~~a~~~g~-------------------gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~n 155 (345)
T COG3866 95 ITIKIGSNKTIVGSGADATLVGG-------------------GLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHN 155 (345)
T ss_pred EEEeeccccEEEeeccccEEEec-------------------eEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeE
Confidence 55677889999996 2244432 378888999999999999887 467888 78899
Q ss_pred EEEEeEEEECCCC---CCCCCe-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcc
Q 011659 223 VIVQGITILAPVT---SPNTDG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSA 297 (480)
Q Consensus 223 v~i~~~~i~~~~~---~~n~DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~ 297 (480)
+.|+++++..... ....|| +++. .+..|+|++|.|...|-..-+.+... ......-.+|++.+|.|.+...+
T Consensus 156 IWIDH~tf~~~s~~~~~~h~DGl~Dik~~AnyITiS~n~fhdh~Kssl~G~sD~---~~~~~~~~kvT~hhNyFkn~~qR 232 (345)
T COG3866 156 IWIDHNTFSGGSYNASGSHGDGLVDIKKDANYITISYNKFHDHDKSSLLGSSDS---SNYDDGKYKVTIHHNYFKNLYQR 232 (345)
T ss_pred EEEEeeEeccccccccccCCCccEEeccCCcEEEEEeeeeecCCeeeeeccCCc---ccccCCceeEEEecccccccccc
Confidence 9999999998431 123444 3444 46789999999998877766655321 11122357899999999865422
Q ss_pred --eEEEcccccCceeEEEEEeeEEeCCC-ceEEE
Q 011659 298 --VIALGSEMSGGIQDVRAEDITAIDSE-SGVRI 328 (480)
Q Consensus 298 --gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i 328 (480)
.+++| -+++.|+.+.+.. .|+.+
T Consensus 233 ~PriRfG--------~vHvyNNYy~~~~~~g~a~ 258 (345)
T COG3866 233 GPRIRFG--------MVHVYNNYYEGNPKFGVAI 258 (345)
T ss_pred CCceEee--------EEEEeccccccCcccceEE
Confidence 34544 5677888887443 34433
No 37
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=98.07 E-value=0.00034 Score=66.38 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=37.6
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCee---eeeeecccccceEEEe
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW---LTGSFNLTSHFTLFLH 113 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y---~~~~l~l~sn~~l~~~ 113 (480)
++..++|+.||-.. |=-++|.+|+. .+.||++|+|-- .-..+.++.+-||++.
T Consensus 30 ~~~~~vni~dy~~~-----dwiasfkqaf~--------e~qtvvvpagl~cenint~ifip~gktl~v~ 85 (464)
T PRK10123 30 PARQSVNINDYNPH-----DWIASFKQAFS--------EGQTVVVPAGLVCDNINTGIFIPPGKTLHIL 85 (464)
T ss_pred CCCceeehhhcCcc-----cHHHHHHHHhc--------cCcEEEecCccEecccccceEeCCCCeEEEE
Confidence 36779999999753 55677888875 356999999953 2236777777776653
No 38
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=97.85 E-value=0.00015 Score=67.51 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=63.2
Q ss_pred eEEEe-ccccEEEEeEEEECC-----------CCCCCCCeEecCCCccEEEEecEEeeC---------CceeeecCCCCc
Q 011659 214 NVHPV-YSSSVIVQGITILAP-----------VTSPNTDGINPDSCTNTRIEDCYIVSG---------DDCVAVKSGWDQ 272 (480)
Q Consensus 214 ~i~~~-~~~nv~i~~~~i~~~-----------~~~~n~DGI~~~~s~nV~I~n~~i~~g---------dD~iai~sg~~~ 272 (480)
++.+. .++||.|+|++|+.. ......|+|.+..++||.|++|.+..+ |..+.++.+
T Consensus 38 G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~--- 114 (200)
T PF00544_consen 38 GLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKG--- 114 (200)
T ss_dssp EEEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESS---
T ss_pred eEEEecCCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeC---
Confidence 45554 677777777777761 123467889998899999999999766 334556544
Q ss_pred cCcccCCCceeEEEEEEEEeCCCcceEEEccc----ccCceeEEEEEeeEEeCC
Q 011659 273 YGIAYGMPTKQLIIRRLTCISPFSAVIALGSE----MSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 273 ~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~----~~~~v~nI~v~n~~~~~~ 322 (480)
+.+|+|++|.|.+.. .+..+|+. ...+ .++++.+|.+.++
T Consensus 115 --------s~~vTiS~n~f~~~~-k~~l~G~~d~~~~~~~-~~vT~hhN~f~~~ 158 (200)
T PF00544_consen 115 --------SDNVTISNNIFDNHN-KTMLIGSSDSNSTDRG-LRVTFHHNYFANT 158 (200)
T ss_dssp --------TEEEEEES-EEEEEE-ETCEESSCTTCGGGTT-EEEEEES-EEEEE
T ss_pred --------CceEEEEchhccccc-cccccCCCCCccccCC-ceEEEEeEEECch
Confidence 899999999998654 45667775 1223 7888888888654
No 39
>PLN02682 pectinesterase family protein
Probab=97.83 E-value=0.0053 Score=61.87 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=67.5
Q ss_pred EEEEeeecEEEEeEEEEeCCCc---------eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCC
Q 011659 192 IEIMYSQNIQISNLTLINSPSW---------NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~---------~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gd 261 (480)
-.....+++..+|++|+|+... .+- ....+...+.+|++... .|-+... ...-..+||.|...=
T Consensus 157 T~~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~-----QDTLy~~-~gRqyf~~C~IeG~V 230 (369)
T PLN02682 157 TFAVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGA-----QDTLYDH-LGRHYFKDCYIEGSV 230 (369)
T ss_pred EEEEECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEecc-----ccceEEC-CCCEEEEeeEEcccc
Confidence 3445677899999999986421 121 13466777777777753 2333322 234566777776544
Q ss_pred ceeeecCCCCccCcccCCCceeEEEEEEEEeCCC--cceEEEccc-ccCceeEEEEEeeEEeCCCceEEEEeecCCC-Cc
Q 011659 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF--SAVIALGSE-MSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GF 337 (480)
Q Consensus 262 D~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~--~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~ 337 (480)
|-| . | .-...+++|++..-. ...|..-+. ....-....|.||++.+.. -+.+ |+. +.
T Consensus 231 DFI-F--G-----------~g~a~Fe~C~I~s~~~~~G~ITA~~r~~~~~~~GfvF~~C~itg~g-~~yL----GRpW~~ 291 (369)
T PLN02682 231 DFI-F--G-----------NGLSLYEGCHLHAIARNFGALTAQKRQSVLEDTGFSFVNCKVTGSG-ALYL----GRAWGT 291 (369)
T ss_pred cEE-e--c-----------CceEEEEccEEEEecCCCeEEecCCCCCCCCCceEEEEeeEecCCC-ceEe----ecCCCC
Confidence 422 1 1 235566666665311 012222221 1122346667777776542 1111 111 23
Q ss_pred eecEEEEeeEecc
Q 011659 338 VKDVYVRRMTMKT 350 (480)
Q Consensus 338 v~nI~~~ni~~~~ 350 (480)
-..+.|.|..|.+
T Consensus 292 yarvVf~~t~m~~ 304 (369)
T PLN02682 292 FSRVVFAYTYMDN 304 (369)
T ss_pred cceEEEEeccCCC
Confidence 4556666666665
No 40
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=97.82 E-value=0.00086 Score=63.09 Aligned_cols=124 Identities=21% Similarity=0.236 Sum_probs=81.8
Q ss_pred EEEEeEEEEeCCC------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCcc
Q 011659 200 IQISNLTLINSPS------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQY 273 (480)
Q Consensus 200 v~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~ 273 (480)
+.|+|+++..... .++.+..++++.|+++++.+. +.+|+.+..+....+.+..... ++.+..+
T Consensus 94 ~~i~nl~i~~~~~~~~~~~~~i~~~~~~~~~i~nv~~~~~----~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~---- 162 (225)
T PF12708_consen 94 IQIRNLTIDGNGIDPNNNNNGIRFNSSQNVSISNVRIENS----GGDGIYFNTGTDYRIIGSTHVS---GIFIDNG---- 162 (225)
T ss_dssp EEEEEEEEEETCGCE-SCEEEEEETTEEEEEEEEEEEES-----SS-SEEEECCEECEEECCEEEE---EEEEESC----
T ss_pred EEEEeeEEEcccccCCCCceEEEEEeCCeEEEEeEEEEcc----CccEEEEEccccCcEeecccce---eeeeccc----
Confidence 3477777765432 357777788888888888863 4567777654444444433221 1223222
Q ss_pred CcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeC-CCceEEEEeecCCCCceecEEEEeeEecccc
Q 011659 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID-SESGVRIKTAVGRGGFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 274 g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~-~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~ 352 (480)
..++.+.|+.+.... .|+..+ -++++++||.+.+ ...|+.+.... ++.++|++++++.
T Consensus 163 -------~~~~~~~~~~~~~~~-~g~~~~------~~~~~i~n~~~~~~~~~gi~i~~~~-------~~~i~n~~i~~~~ 221 (225)
T PF12708_consen 163 -------SNNVIVNNCIFNGGD-NGIILG------NNNITISNNTFEGNCGNGINIEGGS-------NIIISNNTIENCD 221 (225)
T ss_dssp -------EEEEEEECEEEESSS-CSEECE------EEEEEEECEEEESSSSESEEEEECS-------EEEEEEEEEESSS
T ss_pred -------eeEEEECCccccCCC-ceeEee------cceEEEEeEEECCccceeEEEECCe-------EEEEEeEEEECCc
Confidence 466777888888776 664443 2799999999988 66899887652 3888888888887
Q ss_pred eeE
Q 011659 353 WAF 355 (480)
Q Consensus 353 ~~i 355 (480)
.+|
T Consensus 222 ~g~ 224 (225)
T PF12708_consen 222 DGI 224 (225)
T ss_dssp EEE
T ss_pred cCc
Confidence 776
No 41
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=97.75 E-value=0.0034 Score=61.13 Aligned_cols=156 Identities=19% Similarity=0.206 Sum_probs=100.6
Q ss_pred CCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCc
Q 011659 85 EGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD 164 (480)
Q Consensus 85 ~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~ 164 (480)
.+|..+-+. |+| .+.+.+....+|..+.++++-+...- ..+. -...++.++|
T Consensus 32 ~pgd~~~i~-g~~-~g~~vInr~l~l~ge~ga~l~g~g~G------------------------~~vt-v~aP~~~v~G- 83 (408)
T COG3420 32 KPGDYYGIS-GRY-AGNFVINRALTLRGENGAVLDGGGKG------------------------SYVT-VAAPDVIVEG- 83 (408)
T ss_pred CCCcEEEEe-eee-cccEEEccceeeccccccEEecCCcc------------------------cEEE-EeCCCceeee-
Confidence 577777787 776 34555555666767777776543211 1232 2345666666
Q ss_pred cceEeCCChhhhhhhccCCCCcCCCeEE-EEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCC---CCCCC
Q 011659 165 NGTIDGQGELWWRKFRAGELKYTRPYLI-EIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVT---SPNTD 240 (480)
Q Consensus 165 ~G~idG~g~~~w~~~~~~~~~~~~p~~i-~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~---~~n~D 240 (480)
-++.+.|.... .....| .-...+.-.|++..+... .+++.+..+.++.|++.+|....+ ....+
T Consensus 84 -l~vr~sg~~lp----------~m~agI~v~~~at~A~Vr~N~l~~n-~~Gi~l~~s~d~~i~~n~i~G~~~~r~~~rGn 151 (408)
T COG3420 84 -LTVRGSGRSLP----------AMDAGIFVGRTATGAVVRHNDLIGN-SFGIYLHGSADVRIEGNTIQGLADLRVAERGN 151 (408)
T ss_pred -EEEecCCCCcc----------cccceEEeccCcccceEEccccccc-ceEEEEeccCceEEEeeEEeeccccchhhccC
Confidence 45555443211 111223 333455666776666654 368888999999999999987653 34578
Q ss_pred eEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEe
Q 011659 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCI 292 (480)
Q Consensus 241 GI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~ 292 (480)
||++.+++++.|....|.-+.|||-... +++..|+++.++
T Consensus 152 GI~vyNa~~a~V~~ndisy~rDgIy~~~------------S~~~~~~gnr~~ 191 (408)
T COG3420 152 GIYVYNAPGALVVGNDISYGRDGIYSDT------------SQHNVFKGNRFR 191 (408)
T ss_pred ceEEEcCCCcEEEcCccccccceEEEcc------------cccceecccchh
Confidence 9999999999999999999999987765 455555555555
No 42
>PLN02634 probable pectinesterase
Probab=97.74 E-value=0.013 Score=58.75 Aligned_cols=131 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred EeeecEEEEeEEEEeCCCc---------eE-EEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCcee
Q 011659 195 MYSQNIQISNLTLINSPSW---------NV-HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264 (480)
Q Consensus 195 ~~~~nv~I~~v~i~ns~~~---------~i-~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~i 264 (480)
...+++..+|++|+|+... .+ .....+...+.+|++... .|-+... ...-..+||.|...=|=|
T Consensus 146 V~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~-----QDTL~~~-~gR~yf~~CyIeG~VDFI 219 (359)
T PLN02634 146 VYANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGA-----QDTLCDD-AGRHYFKECYIEGSIDFI 219 (359)
T ss_pred EECCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEecc-----cceeeeC-CCCEEEEeeEEcccccEE
Confidence 3567889999999987421 11 123467778888888753 3434332 234667777777654432
Q ss_pred eecCCCCccCcccCCCceeEEEEEEEEeCCCc--ceEEEcc-cccCceeEEEEEeeEEeCCCceEEEEeecCCC-Cceec
Q 011659 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS--AVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKD 340 (480)
Q Consensus 265 ai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~--~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~n 340 (480)
.+ .-...++||++....+ .-|..-+ .....-....|.||++.+.. -+.+ |+. +.-..
T Consensus 220 -FG-------------~g~a~Fe~C~I~s~~~~~g~ITA~~R~~~~~~~GfvF~~C~vtg~g-~~yL----GRPW~~yar 280 (359)
T PLN02634 220 -FG-------------NGRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTG-PLYV----GRAMGQYSR 280 (359)
T ss_pred -cC-------------CceEEEeccEEEEecCCCcEEEeCCCCCCCCCcEEEEEcCEEcCCc-ceEe----cCCCCCcce
Confidence 11 2345677777764210 1222221 12223356777777776642 1111 222 33456
Q ss_pred EEEEeeEecc
Q 011659 341 VYVRRMTMKT 350 (480)
Q Consensus 341 I~~~ni~~~~ 350 (480)
+.|.+..|.+
T Consensus 281 vVf~~t~l~~ 290 (359)
T PLN02634 281 IVYAYTYFDA 290 (359)
T ss_pred EEEEecccCC
Confidence 7777766665
No 43
>PLN02176 putative pectinesterase
Probab=97.72 E-value=0.024 Score=56.73 Aligned_cols=130 Identities=19% Similarity=0.180 Sum_probs=68.7
Q ss_pred eeecEEEEeEEEEeCCC----------ceE-EEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCcee
Q 011659 196 YSQNIQISNLTLINSPS----------WNV-HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV 264 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~----------~~i-~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~i 264 (480)
.++++..+|++|+|... ..+ .....+...+.+|++... .|-+... ...-..++|.|...=|=|
T Consensus 120 ~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~-----QDTLy~~-~gRqyf~~CyIeG~VDFI 193 (340)
T PLN02176 120 YASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGF-----QDTLFDG-KGRHYYKRCVISGGIDFI 193 (340)
T ss_pred ECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEecc-----cceeEeC-CcCEEEEecEEEecccEE
Confidence 46778888888888632 111 123456777777777753 3434332 334667777777654433
Q ss_pred eecCCCCccCcccCCCceeEEEEEEEEeCCC--------cceEEEccc-ccCceeEEEEEeeEEeCCCceEEEEeecCCC
Q 011659 265 AVKSGWDQYGIAYGMPTKQLIIRRLTCISPF--------SAVIALGSE-MSGGIQDVRAEDITAIDSESGVRIKTAVGRG 335 (480)
Q Consensus 265 ai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~--------~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~ 335 (480)
- | .-...++||++..-. ...|.--+. ....-....|.||++.+.. +.+-|+.
T Consensus 194 F---G-----------~a~a~Fe~C~I~s~~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~g-----~~yLGRP 254 (340)
T PLN02176 194 F---G-----------YAQSIFEGCTLKLTLGIYPPNEPYGTITAQGRPSPSDKGGFVFKDCTVTGVG-----KALLGRA 254 (340)
T ss_pred e---c-----------CceEEEeccEEEEecccCCCCCCcEEEEeCCCCCCCCCcEEEEECCEEccCc-----ceeeecC
Confidence 1 1 234677777776311 011222221 1123346777788776542 1111222
Q ss_pred -CceecEEEEeeEecc
Q 011659 336 -GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 -g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.|..|.+
T Consensus 255 W~~yarvVf~~t~m~~ 270 (340)
T PLN02176 255 WGSYARVIFYRSRFSD 270 (340)
T ss_pred CCCCceEEEEecCcCC
Confidence 334567777776665
No 44
>PLN02773 pectinesterase
Probab=97.63 E-value=0.016 Score=57.47 Aligned_cols=133 Identities=17% Similarity=0.110 Sum_probs=78.7
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eE-EEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NV-HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i-~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.+..++++..+|++|+|+... .+ .....+.+.+.+|++... .|-+.... ....++||.|...=|=|- +
T Consensus 97 v~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~-----QDTL~~~~-gr~yf~~c~IeG~VDFIF-G 169 (317)
T PLN02773 97 VIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGW-----QDTLYLHY-GKQYLRDCYIEGSVDFIF-G 169 (317)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeecc-----cceeEeCC-CCEEEEeeEEeecccEEe-e
Confidence 444688999999999998431 12 223467888888888863 34444432 356788888887555331 2
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCCcceE-EEcccc-cCceeEEEEEeeEEeCCCc--eEEEEeecCCC-CceecEE
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEM-SGGIQDVRAEDITAIDSES--GVRIKTAVGRG-GFVKDVY 342 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi-~igs~~-~~~v~nI~v~n~~~~~~~~--Gi~i~s~~~~~-g~v~nI~ 342 (480)
.-...+++|++.... .|. ..-+.. ...-....|.||++.+... -+.+ |+. +.-..+.
T Consensus 170 -------------~g~a~Fe~c~i~s~~-~g~ITA~~r~~~~~~~GfvF~~c~it~~~~~~~~yL----GRpW~~~a~vV 231 (317)
T PLN02773 170 -------------NSTALLEHCHIHCKS-AGFITAQSRKSSQESTGYVFLRCVITGNGGSGYMYL----GRPWGPFGRVV 231 (317)
T ss_pred -------------ccEEEEEeeEEEEcc-CcEEECCCCCCCCCCceEEEEccEEecCCCCcceee----cCCCCCCceEE
Confidence 345788888887543 332 222211 1233467888888876532 1112 222 3345777
Q ss_pred EEeeEecc
Q 011659 343 VRRMTMKT 350 (480)
Q Consensus 343 ~~ni~~~~ 350 (480)
|.|..|.+
T Consensus 232 f~~t~l~~ 239 (317)
T PLN02773 232 FAYTYMDA 239 (317)
T ss_pred EEecccCC
Confidence 77777776
No 45
>PLN02497 probable pectinesterase
Probab=97.52 E-value=0.032 Score=55.55 Aligned_cols=131 Identities=12% Similarity=0.079 Sum_probs=67.9
Q ss_pred EeeecEEEEeEEEEeCCCc-----------eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCc
Q 011659 195 MYSQNIQISNLTLINSPSW-----------NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262 (480)
Q Consensus 195 ~~~~nv~I~~v~i~ns~~~-----------~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD 262 (480)
...+++..+|++|.|+..+ .+- ....+...+.+|++.... |-+... ...-..+||.|...=|
T Consensus 112 v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~Q-----DTLy~~-~gRqyf~~C~IeG~VD 185 (331)
T PLN02497 112 TLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQ-----DTLWDS-DGRHYFKRCTIQGAVD 185 (331)
T ss_pred EecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccc-----cceeeC-CCcEEEEeCEEEeccc
Confidence 4567888888888887431 111 234667777777777532 333322 2345677777776544
Q ss_pred eeeecCCCCccCcccCCCceeEEEEEEEEeCCC-------cceEEEcc-cccCceeEEEEEeeEEeCCCceEEEEeecCC
Q 011659 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-------SAVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGR 334 (480)
Q Consensus 263 ~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-------~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~ 334 (480)
-| . | .-...++||++..-. ...|.--+ ..........|.||++.+.. -+.+ |+
T Consensus 186 FI-F--G-----------~g~a~Fe~C~I~s~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~g-~~yL----GR 246 (331)
T PLN02497 186 FI-F--G-----------SGQSIYESCVIQVLGGQLEPGLAGFITAQGRTNPYDANGFVFKNCLVYGTG-SAYL----GR 246 (331)
T ss_pred EE-c--c-----------CceEEEEccEEEEecCcCCCCCceEEEecCCCCCCCCceEEEEccEEccCC-CEEE----eC
Confidence 32 1 1 234566777766321 01222221 12223346677777776542 1111 11
Q ss_pred C-CceecEEEEeeEecc
Q 011659 335 G-GFVKDVYVRRMTMKT 350 (480)
Q Consensus 335 ~-g~v~nI~~~ni~~~~ 350 (480)
. ..-..+.|.+..|.+
T Consensus 247 PW~~ysrvvf~~t~m~~ 263 (331)
T PLN02497 247 PWRGYSRVLFYNSNLTD 263 (331)
T ss_pred CCCCCceEEEEecccCC
Confidence 1 234566676666665
No 46
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=97.48 E-value=0.063 Score=55.05 Aligned_cols=113 Identities=17% Similarity=0.120 Sum_probs=62.9
Q ss_pred EEEEEeeecEEEEeEEEEeCCCc--------eE-EEeccccEEEEeEEEECCCCCCCCCeEecC-----------CCccE
Q 011659 191 LIEIMYSQNIQISNLTLINSPSW--------NV-HPVYSSSVIVQGITILAPVTSPNTDGINPD-----------SCTNT 250 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~~--------~i-~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-----------~s~nV 250 (480)
+-.....+++..+|++|+|+... .+ .....+.+.+.+|+|.... |-+... .....
T Consensus 199 ATv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~Q-----DTLy~~~~~~~~~~~~~~~gRq 273 (422)
T PRK10531 199 AVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQ-----DTFFVTNSGVQNRLETDRQPRT 273 (422)
T ss_pred EEEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEeccc-----ceeeeccccccccccccccccE
Confidence 34556788999999999998532 11 1235677788888887643 333321 12246
Q ss_pred EEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc----ce-EEEcccccCceeEEEEEeeEEeCC
Q 011659 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS----AV-IALGSEMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 251 ~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~----~g-i~igs~~~~~v~nI~v~n~~~~~~ 322 (480)
.+++|.|...=|=| + | .-...++||++..-.. .| |.-.+.....-...+|.||++.+.
T Consensus 274 Yf~~CyIeG~VDFI-F--G-----------~g~AvFenC~I~s~~~~~~~~g~ITA~~t~~~~~~GfvF~nCrit~~ 336 (422)
T PRK10531 274 YVKNSYIEGDVDFV-F--G-----------RGAVVFDNTEFRVVNSRTQQEAYVFAPATLPNIYYGFLAINSRFNAS 336 (422)
T ss_pred EEEeCEEeecccEE-c--c-----------CceEEEEcCEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEecC
Confidence 67777777654432 1 1 2355677777764210 12 111221122344677777777764
No 47
>PLN02432 putative pectinesterase
Probab=97.47 E-value=0.039 Score=54.17 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=67.0
Q ss_pred EEeeecEEEEeEEEEeCCCc---eE-EEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCC
Q 011659 194 IMYSQNIQISNLTLINSPSW---NV-HPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~~---~i-~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg 269 (480)
....+++..+|++|+|...- .+ .....+...+.+|++... .|-+... ...-..+||.|...=|-|- +
T Consensus 90 ~v~a~~f~a~nlt~~Nt~g~~~QAvAl~v~gDr~~f~~c~~~G~-----QDTLy~~-~gr~yf~~c~I~G~VDFIF-G-- 160 (293)
T PLN02432 90 SVLASDFVGRFLTIQNTFGSSGKAVALRVAGDRAAFYGCRILSY-----QDTLLDD-TGRHYYRNCYIEGATDFIC-G-- 160 (293)
T ss_pred EEECCCeEEEeeEEEeCCCCCCceEEEEEcCCcEEEEcceEecc-----cceeEEC-CCCEEEEeCEEEecccEEe-c--
Confidence 34567888889999887321 11 123456777777777753 3334332 2345677777776544331 1
Q ss_pred CCccCcccCCCceeEEEEEEEEeCCC--cceEEEccc-ccCceeEEEEEeeEEeCCCceEEEEeecCCC-CceecEEEEe
Q 011659 270 WDQYGIAYGMPTKQLIIRRLTCISPF--SAVIALGSE-MSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDVYVRR 345 (480)
Q Consensus 270 ~~~~g~~~~~~~~ni~I~n~~~~~~~--~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~nI~~~n 345 (480)
.-...+++|++.... ...|..-+. ....-....|.||++.+.. . .+-|+. +.-..+.|.|
T Consensus 161 -----------~g~a~Fe~c~i~s~~~~~g~itA~~r~~~~~~~Gfvf~~c~itg~g-~----~yLGRpW~~~srvvf~~ 224 (293)
T PLN02432 161 -----------NAASLFEKCHLHSLSPNNGAITAQQRTSASENTGFTFLGCKLTGAG-T----TYLGRPWGPYSRVVFAL 224 (293)
T ss_pred -----------CceEEEEeeEEEEecCCCCeEEecCCCCCCCCceEEEEeeEEcccc-h----hhccCCCCCccEEEEEe
Confidence 234566677665321 012322221 1122345677777776432 1 111221 3345566666
Q ss_pred eEecc
Q 011659 346 MTMKT 350 (480)
Q Consensus 346 i~~~~ 350 (480)
..|.+
T Consensus 225 t~l~~ 229 (293)
T PLN02432 225 SYMSS 229 (293)
T ss_pred cccCC
Confidence 66654
No 48
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=97.44 E-value=0.028 Score=59.24 Aligned_cols=134 Identities=12% Similarity=0.095 Sum_probs=71.7
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|+|.... .+- ....+...+.+|++... .|-+.... ..-..++|+|...=|-| +
T Consensus 307 Tv~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~Gy-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F 379 (529)
T PLN02170 307 TVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGY-----QDSLYTHS-KRQFYRETDITGTVDFI-F 379 (529)
T ss_pred EEEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEecc-----CCcceeCC-CCEEEEeeEEcccccee-c
Confidence 4455677888899999887431 122 23567778888888753 34344332 34466778777644422 1
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCCc----ceEEEcc-cccCceeEEEEEeeEEeCCCceEEEEeecCCC-Cceec
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFS----AVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKD 340 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~----~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~n 340 (480)
| .-...++||.+..... .-|..-+ .....-..+.|.||++.+.. +++=|+. ..-..
T Consensus 380 --G-----------~a~avFq~C~I~~~~~~~~~g~ITAq~R~~~~~~~Gfvf~~C~it~~~-----~~yLGRPW~~ysr 441 (529)
T PLN02170 380 --G-----------NSAVVFQSCNIAARKPSGDRNYVTAQGRSDPNQNTGISIHNCRITAES-----MTYLGRPWKEYSR 441 (529)
T ss_pred --c-----------cceEEEeccEEEEecCCCCceEEEecCCCCCCCCceEEEEeeEEecCC-----ceeeeCCCCCCce
Confidence 1 2346677777764210 1122211 11223456777777776643 1222222 23455
Q ss_pred EEEEeeEecc
Q 011659 341 VYVRRMTMKT 350 (480)
Q Consensus 341 I~~~ni~~~~ 350 (480)
+.|.+..|.+
T Consensus 442 vVf~~t~l~~ 451 (529)
T PLN02170 442 TVVMQSFIDG 451 (529)
T ss_pred EEEEecccCC
Confidence 6666666665
No 49
>PLN02665 pectinesterase family protein
Probab=97.42 E-value=0.033 Score=56.31 Aligned_cols=135 Identities=15% Similarity=0.112 Sum_probs=73.2
Q ss_pred EEEEeeecEEEEeEEEEeCCC---------ceEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCC
Q 011659 192 IEIMYSQNIQISNLTLINSPS---------WNVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD 261 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~---------~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gd 261 (480)
-....++++..+|++|+|+.. -.+- ....+...+.+|++... .|-+... ...-..+||.|...=
T Consensus 148 Tv~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~f~G~-----QDTL~~~-~gr~yf~~CyIeG~V 221 (366)
T PLN02665 148 TLIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCRFIGF-----QDTLCDD-KGRHFFKDCYIEGTV 221 (366)
T ss_pred EEEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcceeccc-----cceeEeC-CCCEEEEeeEEeecc
Confidence 344567888899999998632 1111 23467778888888753 3434332 234567788887654
Q ss_pred ceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc---ceEEEccc-ccCceeEEEEEeeEEeCCCceEEEEeecCCC-C
Q 011659 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS---AVIALGSE-MSGGIQDVRAEDITAIDSESGVRIKTAVGRG-G 336 (480)
Q Consensus 262 D~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~---~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g 336 (480)
|=|- + .-...+++|++..... ..|.--+. ....-....|.||++.+....+.+ |+. +
T Consensus 222 DFIF-G-------------~g~a~fe~C~i~s~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~~~~~yL----GRpW~ 283 (366)
T PLN02665 222 DFIF-G-------------SGKSLYLNTELHVVGDGGLRVITAQARNSEAEDSGFSFVHCKVTGTGTGAYL----GRAWM 283 (366)
T ss_pred ceec-c-------------ccceeeEccEEEEecCCCcEEEEcCCCCCCCCCceEEEEeeEEecCCCceee----cCCCC
Confidence 4331 1 2345677777764321 11222211 112334667888888775322222 221 3
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|.+..|.+
T Consensus 284 ~ysrvVf~~t~m~~ 297 (366)
T PLN02665 284 SRPRVVFAYTEMSS 297 (366)
T ss_pred CcceEEEEccccCC
Confidence 34567777777765
No 50
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=97.39 E-value=0.036 Score=59.26 Aligned_cols=110 Identities=11% Similarity=0.104 Sum_probs=62.4
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|...- .+-+ ...+.+.+.+|+|... .|-+.... ..-..++|.|...=|-| +
T Consensus 325 ~~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~-----QDTLy~~~-~rq~y~~C~I~GtVDFI-F- 396 (553)
T PLN02708 325 VGVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGN-----QDTLYAHS-LRQFYKSCRIQGNVDFI-F- 396 (553)
T ss_pred EEEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeec-----cccceeCC-CceEEEeeEEeecCCEE-e-
Confidence 334567889999999987532 2222 3567778888888763 34444433 34467788877654432 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCC---------CcceEEEcc-cccCceeEEEEEeeEEeCC
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISP---------FSAVIALGS-EMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~---------~~~gi~igs-~~~~~v~nI~v~n~~~~~~ 322 (480)
| .-...++||.+... ....|..-+ .....-..+.|.||++.+.
T Consensus 397 -G-----------~a~avfq~c~i~~~~~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~C~it~~ 449 (553)
T PLN02708 397 -G-----------NSAAVFQDCAILIAPRQLKPEKGENNAVTAHGRTDPAQSTGFVFQNCLINGT 449 (553)
T ss_pred -c-----------CceEEEEccEEEEeccccCCCCCCceEEEeCCCCCCCCCceEEEEccEEecC
Confidence 1 34567777777621 112233321 1223345677888887664
No 51
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=97.37 E-value=0.006 Score=60.31 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=72.6
Q ss_pred EeeecEEEEeEEEEeCCCc------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecC
Q 011659 195 MYSQNIQISNLTLINSPSW------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268 (480)
Q Consensus 195 ~~~~nv~I~~v~i~ns~~~------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~s 268 (480)
...+++.++|++|+|+... .+. ...+.+.+.+|++.+. .|-+... ..+..++||.|...-|-|- +
T Consensus 84 v~a~~f~~~nit~~Nt~g~~~~qAvAl~-~~~d~~~f~~c~~~g~-----QDTL~~~-~~r~y~~~c~IeG~vDFIf-G- 154 (298)
T PF01095_consen 84 VNADDFTAENITFENTAGPSGGQAVALR-VSGDRAAFYNCRFLGY-----QDTLYAN-GGRQYFKNCYIEGNVDFIF-G- 154 (298)
T ss_dssp E-STT-EEEEEEEEEHCSGSG----SEE-ET-TSEEEEEEEEE-S-----TT-EEE--SSEEEEES-EEEESEEEEE-E-
T ss_pred ccccceeeeeeEEecCCCCcccceeeee-ecCCcEEEEEeEEccc-----cceeeec-cceeEEEeeEEEecCcEEE-C-
Confidence 4578999999999997432 233 3567889999999863 4555544 3456788999988766442 1
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCc--------eEEEE-eecC
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSES--------GVRIK-TAVG 333 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~--------Gi~i~-s~~~ 333 (480)
.-...++||++.... ...|.-.+ .....-...+|.||++..... ...+. .|
T Consensus 155 ------------~~~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vF~~c~i~~~~~~~~~~~~~~~yLGRpW-- 220 (298)
T PF01095_consen 155 ------------NGTAVFENCTIHSRRPGGGQGGYITAQGRTSPSQKSGFVFDNCTITGDSGVSPSYSDGSVYLGRPW-- 220 (298)
T ss_dssp ------------SSEEEEES-EEEE--SSTSSTEEEEEE---CTTSS-EEEEES-EEEESTTTCGGCCCSTEEEE--S--
T ss_pred ------------CeeEEeeeeEEEEeccccccceeEEeCCccccCCCeEEEEEEeEEecCccccccccceeEEecCcc--
Confidence 235578888887422 01232222 222345688999999987532 12221 12
Q ss_pred CCCceecEEEEeeEeccc
Q 011659 334 RGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 334 ~~g~v~nI~~~ni~~~~~ 351 (480)
+.-..+.|.|..|.+.
T Consensus 221 --~~~s~vvf~~t~m~~~ 236 (298)
T PF01095_consen 221 --GPYSRVVFINTYMDDH 236 (298)
T ss_dssp --SEETEEEEES-EE-TT
T ss_pred --cceeeEEEEccccCCe
Confidence 3445788888888874
No 52
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=97.35 E-value=0.0021 Score=59.84 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=78.0
Q ss_pred EEE-EeeecEEEEeEEEEe---------------CCCceEEEeccccEEEEeEEEECCCC---CCCCCe-EecC-CCccE
Q 011659 192 IEI-MYSQNIQISNLTLIN---------------SPSWNVHPVYSSSVIVQGITILAPVT---SPNTDG-INPD-SCTNT 250 (480)
Q Consensus 192 i~~-~~~~nv~I~~v~i~n---------------s~~~~i~~~~~~nv~i~~~~i~~~~~---~~n~DG-I~~~-~s~nV 250 (480)
+.+ ..++||.|++++|++ .....+.+..+++|.|++|++..... ....|| +++. .+.+|
T Consensus 39 ~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~v 118 (200)
T PF00544_consen 39 LRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNV 118 (200)
T ss_dssp EEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEE
T ss_pred EEEecCCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceE
Confidence 444 489999999999998 24467899999999999999998621 011454 6665 58899
Q ss_pred EEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCC-CceEEEE
Q 011659 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIK 329 (480)
Q Consensus 251 ~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~-~~Gi~i~ 329 (480)
+|++|.|...+.+..+++. +.. .... ..++++.+|.+.+...+.-.+. .-.+.+-|+.+.+. ..++...
T Consensus 119 TiS~n~f~~~~k~~l~G~~-d~~--~~~~-~~~vT~hhN~f~~~~~R~P~~r------~G~~Hv~NN~~~~~~~y~i~~~ 188 (200)
T PF00544_consen 119 TISNNIFDNHNKTMLIGSS-DSN--STDR-GLRVTFHHNYFANTNSRNPRVR------FGYVHVYNNYYYNWSGYAIGAR 188 (200)
T ss_dssp EEES-EEEEEEETCEESSC-TTC--GGGT-TEEEEEES-EEEEEEE-TTEEC------SCEEEEES-EEEEECSESEEEE
T ss_pred EEEchhccccccccccCCC-CCc--cccC-CceEEEEeEEECchhhCCCccc------ccEEEEEEeeeECCCCEEEEcc
Confidence 9999999876555444442 111 1222 2889999998874321111221 12578888877653 3555443
No 53
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=97.34 E-value=0.038 Score=58.48 Aligned_cols=139 Identities=10% Similarity=0.065 Sum_probs=74.9
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|.|.... .+-+ ...+...+.+|+|... .|-+.... ..-..++|+|...=|-| +
T Consensus 299 T~~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~-----QDTLy~~~-~Rqyy~~C~IeGtVDFI-F 371 (530)
T PLN02933 299 TVGVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGY-----QDTLYVHS-AKQFYRECDIYGTIDFI-F 371 (530)
T ss_pred EEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEec-----ccccccCC-CceEEEeeEEeccccee-c
Confidence 3445667888899999887432 2222 3567788888888863 34444433 34577888887654422 1
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCceEE----EEeecCCC-
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESGVR----IKTAVGRG- 335 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~----i~s~~~~~- 335 (480)
| .-...++||++..-. ...|..-+. ....-..+.|.||++.+...... .+++=|+.
T Consensus 372 --G-----------~a~avFq~C~i~~~~~~~~~~~~iTAq~r~~~~~~tGfvf~~C~it~~~~~~~~~~~~~~yLGRPW 438 (530)
T PLN02933 372 --G-----------NAAVVFQNCSLYARKPNPNHKIAFTAQSRNQSDQPTGISIISSRILAAPDLIPVKENFKAYLGRPW 438 (530)
T ss_pred --c-----------CceEEEeccEEEEeccCCCCceEEEecCCCCCCCCceEEEEeeEEecCCcccccccccceEeccCC
Confidence 1 234567777775321 012222221 12234567888888876432111 12222222
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 439 ~~ysrvVf~~s~l~~ 453 (530)
T PLN02933 439 RKYSRTVIIKSFIDD 453 (530)
T ss_pred CCCceEEEEecccCC
Confidence 335567777776665
No 54
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=97.33 E-value=0.042 Score=58.92 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=79.6
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|.... .+- ....+...+.+|+|... .|-+.... ..-..++|+|...=|-| +
T Consensus 335 ~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F- 406 (566)
T PLN02713 335 FAVVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAY-----QDTLYTHS-LRQFYRECDIYGTVDFI-F- 406 (566)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccC-----CcceEECC-CCEEEEeeEEeccccee-c-
Confidence 334568899999999997431 222 24577888889988863 44455443 34578888887654432 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEc-ccccCceeEEEEEeeEEeCCCceE----EEEeecCCC-C
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALG-SEMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-G 336 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~ig-s~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g 336 (480)
| .-...++||.+.... ...|..- ......-..+.|.||++....... ..+++=|+. .
T Consensus 407 -G-----------~a~avfq~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRPW~ 474 (566)
T PLN02713 407 -G-----------NAAVVFQNCNLYPRLPMQGQFNTITAQGRTDPNQNTGTSIQNCTIKAADDLASSNYTVKTYLGRPWK 474 (566)
T ss_pred -c-----------cceEEEeccEEEEecCCCCCcceeeecCCCCCCCCCEEEEEcCEEecCCcccccccccceeeecCCC
Confidence 1 356778888886421 0123222 122233467888888887653210 112222222 3
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|.+..|.+
T Consensus 475 ~ysr~V~~~s~~~~ 488 (566)
T PLN02713 475 EYSRTVVMQSYIDG 488 (566)
T ss_pred CcceEEEEecccCC
Confidence 34567777777766
No 55
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=97.33 E-value=0.036 Score=58.94 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=67.4
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|+|.... .+- ....+.+.+.+|+|.... |-+.... ..-..++|.|...=|-| +
T Consensus 313 T~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~Q-----DTLy~~~-~rqyy~~C~I~GtVDFI-F 385 (537)
T PLN02506 313 TVAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQ-----DTLYAHS-LRQFYRECEIYGTIDFI-F 385 (537)
T ss_pred EEEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeccc-----ccceecC-CceEEEeeEEecccceE-c
Confidence 3445677888889999887431 121 234667777777777532 3333322 33466777776543322 1
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceEEEEeecCCC-Ccee
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVK 339 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~ 339 (480)
| .-...++||.+..-. ...|..-+ .....-..+.|.||++.+.. . ++=|+. +.-.
T Consensus 386 --G-----------~a~avfq~C~i~~r~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~-~----~yLGRPW~~~s 447 (537)
T PLN02506 386 --G-----------NGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSYVLATQ-P----TYLGRPWKQYS 447 (537)
T ss_pred --c-----------CceeEEeccEEEEccCCCCCCceEEccCCCCCCCCcEEEEEcCEEccCC-c----eEEecCCCCCc
Confidence 1 234566666665321 01222211 11123346677777765532 1 111221 3345
Q ss_pred cEEEEeeEecc
Q 011659 340 DVYVRRMTMKT 350 (480)
Q Consensus 340 nI~~~ni~~~~ 350 (480)
.+.|-+..|.+
T Consensus 448 r~v~~~t~l~~ 458 (537)
T PLN02506 448 RTVFMNTYMSQ 458 (537)
T ss_pred eEEEEecCCCC
Confidence 55666665555
No 56
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=97.29 E-value=0.054 Score=57.29 Aligned_cols=138 Identities=10% Similarity=0.063 Sum_probs=76.4
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|+... .+-+ ...+...+.+|+|... .|-+.... ..-..++|+|...=|-| +
T Consensus 288 ~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F- 359 (520)
T PLN02201 288 FAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGY-----QDTLYTHT-MRQFYRECRITGTVDFI-F- 359 (520)
T ss_pred EEEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeecc-----CCeeEeCC-CCEEEEeeEEeecccEE-e-
Confidence 345577888899999987431 2222 3467788888888863 44455443 33466888887654432 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCceEE----EEeecCCC-C
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESGVR----IKTAVGRG-G 336 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~----i~s~~~~~-g 336 (480)
| .-...++||++..-. ...|..-+. ....-..+.|.||++.+...... .+++=|+. +
T Consensus 360 -G-----------~a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~Gfvf~~C~it~~~~~~~~~~~~~~yLGRPW~ 427 (520)
T PLN02201 360 -G-----------DATAVFQNCQILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFSNISADTDLLPYLNTTATYLGRPWK 427 (520)
T ss_pred -c-----------CceEEEEccEEEEecCCCCCCceEEecCCCCCCCCcEEEEEeeEEecCccccccccccceEeecCCC
Confidence 1 345677777776421 012332221 22234567888888876432111 12222222 3
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|.+..|.+
T Consensus 428 ~ysrvv~~~t~l~~ 441 (520)
T PLN02201 428 LYSRTVFMQNYMSD 441 (520)
T ss_pred CCceEEEEecCcCC
Confidence 45667777777766
No 57
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=97.28 E-value=0.041 Score=59.00 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=75.9
Q ss_pred EEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecC
Q 011659 194 IMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~s 268 (480)
....+++..+|++|+|.... .+- ....+...+.+|+|.... |-+.... ..-..++|.|...=|-| +
T Consensus 341 ~v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~Q-----DTLy~~~-~rq~y~~C~I~GtvDFI-F-- 411 (565)
T PLN02468 341 AVFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQ-----DTLYAHA-QRQFYRECNIYGTVDFI-F-- 411 (565)
T ss_pred eEECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEecc-----chhccCC-CceEEEeeEEeccccee-e--
Confidence 34567888999999987432 122 245777888888888633 4344433 34557888887654422 1
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceEEEEeecCCC-CceecE
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDV 341 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~nI 341 (480)
| .-...++||.+.... ...|..-+ .....-..+.|.||++......-..+++=|+. ..-..+
T Consensus 412 G-----------~a~avfq~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~yLGRPW~~~sr~ 480 (565)
T PLN02468 412 G-----------NSAVVFQNCNILPRRPMKGQQNTITAQGRTDPNQNTGISIQNCTILPLGDLTSVKTFLGRPWKNYSTT 480 (565)
T ss_pred c-----------cceEEEeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEccEEecCCCccccceeeecCCCCCceE
Confidence 1 345677777776321 01233221 12233457888888887653211223332332 334556
Q ss_pred EEEeeEecc
Q 011659 342 YVRRMTMKT 350 (480)
Q Consensus 342 ~~~ni~~~~ 350 (480)
.|.+..|.+
T Consensus 481 v~~~s~~~~ 489 (565)
T PLN02468 481 VIMHSMMGS 489 (565)
T ss_pred EEEecccCC
Confidence 676666665
No 58
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=97.26 E-value=0.035 Score=60.30 Aligned_cols=139 Identities=13% Similarity=0.106 Sum_probs=84.7
Q ss_pred EEEeeecEEEEeEEEEeCCC----ceEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPS----WNVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|... ..+- ....+...+.+|+|... .|-+... ..+-..++|+|...=|-| +
T Consensus 332 ~~v~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~-----QDTLy~~-~~Rqyy~~C~I~GtVDFI-F- 403 (670)
T PLN02217 332 VAIVGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGY-----QDTLYAH-SHRQFYRDCTISGTIDFL-F- 403 (670)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeec-----cchhccC-CCcEEEEeCEEEEeccEE-e-
Confidence 33457789999999998753 1222 24578899999999964 3444443 345678999998754433 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceEE----EEeecCCC-C
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGVR----IKTAVGRG-G 336 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi~----i~s~~~~~-g 336 (480)
| .-...++||.+.... ..-|..-+ .....-..+.|.||++.+...-+. .+++-|+. .
T Consensus 404 -G-----------~a~avfq~C~I~~r~~~~~~~~~ITAqgr~~~~~~tGfvf~~C~i~~~~~~~~~~~~~~~yLGRPW~ 471 (670)
T PLN02217 404 -G-----------DAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKETSKAYLGRPWK 471 (670)
T ss_pred -c-----------CceEEEEccEEEEccCCCCCceeEecCCCCCCCCCceEEEEeeEEecCccccccccccceeeccCCC
Confidence 2 345788888887421 01122211 122345689999999988642111 12322333 4
Q ss_pred ceecEEEEeeEeccc
Q 011659 337 FVKDVYVRRMTMKTM 351 (480)
Q Consensus 337 ~v~nI~~~ni~~~~~ 351 (480)
.-..+.|.+..|.+.
T Consensus 472 ~ysrvVf~~t~l~~~ 486 (670)
T PLN02217 472 EYSRTIIMNTFIPDF 486 (670)
T ss_pred CCceEEEEecccCCe
Confidence 467788888888764
No 59
>PLN02304 probable pectinesterase
Probab=97.25 E-value=0.11 Score=52.63 Aligned_cols=43 Identities=14% Similarity=0.328 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecc---cccceEEE
Q 011659 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL---TSHFTLFL 112 (480)
Q Consensus 68 dT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l---~sn~~l~~ 112 (480)
|-.-||+||+++.+.. ..-.+|+|.+|+|.-. +.+ |.+++|..
T Consensus 86 df~TIQ~AIdavP~~~-~~r~vI~Ik~GvY~Ek-V~Ip~~K~~Itl~G 131 (379)
T PLN02304 86 NFTTVQSAVDAVGNFS-QKRNVIWINSGIYYEK-VTVPKTKPNITFQG 131 (379)
T ss_pred CccCHHHHHhhCcccC-CCcEEEEEeCeEeEEE-EEECCCCCcEEEEe
Confidence 4677999999987521 2345789999999743 233 45566644
No 60
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=97.18 E-value=0.068 Score=57.00 Aligned_cols=139 Identities=9% Similarity=0.008 Sum_probs=79.8
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|+|.... .+- ....+...+.+|+|... .|-+.... ..-..+||+|...=|-| +
T Consensus 307 T~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gy-----QDTLy~~~-~rq~y~~c~I~GtVDFI-F 379 (538)
T PLN03043 307 TFAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGY-----QDTLYVHS-LRQFYRECDIYGTVDFI-F 379 (538)
T ss_pred EEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEecc-----CcccccCC-CcEEEEeeEEeeccceE-e
Confidence 3445668899999999997432 222 24567788888888864 34444433 34678888888654433 1
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG- 335 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~- 335 (480)
| .-...++||++.... ...|...+ .....-..+.|.||++.+...-. ..+++=|+.
T Consensus 380 --G-----------~a~avfq~c~i~~r~~~~~~~~~iTA~~r~~~~~~tG~~~~~c~i~~~~~~~~~~~~~~~yLGRpW 446 (538)
T PLN03043 380 --G-----------NAAAIFQNCNLYARKPMANQKNAFTAQGRTDPNQNTGISIINCTIEAAPDLAMDPNSTMNFLGRPW 446 (538)
T ss_pred --e-----------cceeeeeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEecEEecCCcccccccccceeccCCC
Confidence 1 345677888876421 12333322 12233457888888887653110 112222332
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 447 ~~ysr~v~~~s~i~~ 461 (538)
T PLN03043 447 KPYSRTVYMQSYIGD 461 (538)
T ss_pred CCCceEEEEecccCC
Confidence 335667777777665
No 61
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=97.17 E-value=0.062 Score=57.26 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=76.4
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|+|.... .+- ....+...+.+|+|... .|-+.... ..-..+||.|...=|-| +
T Consensus 317 T~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F 389 (548)
T PLN02301 317 TVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAY-----QDTLYAHS-LRQFYRDSYITGTVDFI-F 389 (548)
T ss_pred EEEEECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeec-----cccceecC-CcEEEEeeEEEecccee-c
Confidence 3444567888999999987431 222 23567888888888863 34444433 34577888887654432 1
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEc-ccccCceeEEEEEeeEEeCCCceE----EEEeecCCC-
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALG-SEMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG- 335 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~ig-s~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~- 335 (480)
| .-...++||++..-. ..-|..- ......-..+.|.||++.+...-. ..+++=|+.
T Consensus 390 --G-----------~a~avfq~c~i~~~~~~~~~~~~iTAqgr~~~~~~tG~vf~~c~i~~~~~~~~~~~~~~~yLGRPW 456 (548)
T PLN02301 390 --G-----------NAAVVFQNCKIVARKPMAGQKNMVTAQGRTDPNQNTGISIQKCDIIASSDLEPVKGSFKTYLGRPW 456 (548)
T ss_pred --c-----------cceeEEeccEEEEecCCCCCCceEEecCCCCCCCCCEEEEEeeEEecCccccccccccceeeecCC
Confidence 1 345677777776421 0123221 112233457888888887653110 112222222
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 457 ~~ysr~V~~~s~l~~ 471 (548)
T PLN02301 457 KEYSRTVVMQSYIDD 471 (548)
T ss_pred CCCceEEEEecccCC
Confidence 334566666666665
No 62
>PLN02671 pectinesterase
Probab=97.15 E-value=0.12 Score=52.00 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=67.7
Q ss_pred EEEeeecEEEEeEEEEeCCC--------ceEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCce
Q 011659 193 EIMYSQNIQISNLTLINSPS--------WNVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDC 263 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~--------~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~ 263 (480)
.....+++..+|++|+|... -.+- ....+.+.+.+|++.... |-+... ...-.++||.|...=|-
T Consensus 149 v~v~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~Q-----DTLy~~-~gR~yf~~CyIeG~VDF 222 (359)
T PLN02671 149 VTIESDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQ-----DTLLDE-TGSHYFYQCYIQGSVDF 222 (359)
T ss_pred EEEECCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccc-----cccEeC-CCcEEEEecEEEEeccE
Confidence 34456788888888888721 1111 124567777777777533 333322 23356777777765443
Q ss_pred eeecCCCCccCcccCCCceeEEEEEEEEeCCC--cceEEEccc-ccCceeEEEEEeeEEeCCCceEEEE-eecCCCCcee
Q 011659 264 VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF--SAVIALGSE-MSGGIQDVRAEDITAIDSESGVRIK-TAVGRGGFVK 339 (480)
Q Consensus 264 iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~--~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~-s~~~~~g~v~ 339 (480)
|- + .-...++||++.... ...|..-+. ....-....|.||++.+.. -+.+. .| +.-.
T Consensus 223 IF-G-------------~g~A~Fe~C~I~s~~~~~G~ITA~~r~~~~~~~GfvF~~C~itg~g-~vyLGRPW----~~ya 283 (359)
T PLN02671 223 IF-G-------------NAKSLYQDCVIQSTAKRSGAIAAHHRDSPTEDTGFSFVNCVINGTG-KIYLGRAW----GNYS 283 (359)
T ss_pred Ee-c-------------ceeEEEeccEEEEecCCCeEEEeeccCCCCCCccEEEEccEEccCc-cEEEeCCC----CCCc
Confidence 31 1 234566677766321 012222221 1123346677777776532 12221 12 2335
Q ss_pred cEEEEeeEecc
Q 011659 340 DVYVRRMTMKT 350 (480)
Q Consensus 340 nI~~~ni~~~~ 350 (480)
.+.|.|..|.+
T Consensus 284 rvVf~~t~m~~ 294 (359)
T PLN02671 284 RTVYSNCFIAD 294 (359)
T ss_pred eEEEEecccCC
Confidence 66666666665
No 63
>PLN02916 pectinesterase family protein
Probab=97.14 E-value=0.11 Score=54.68 Aligned_cols=139 Identities=13% Similarity=0.064 Sum_probs=76.3
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|.|+... .+-+ ...+...+.+|+|... .|-+.... ..-..++|.|...=|-|
T Consensus 271 T~~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-- 342 (502)
T PLN02916 271 TFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGY-----QDTLFVHS-LRQFYRDCHIYGTIDFI-- 342 (502)
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecc-----CceeEeCC-CCEEEEecEEeccccee--
Confidence 3445567888899999887431 2222 3567788888888863 34444433 34567888887654432
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCceE----EEEeecCCC-
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESGV----RIKTAVGRG- 335 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~- 335 (480)
.| .-...++||.+.... ..-|.--+. ....-..+.|.||++.+..... ..+++=|+.
T Consensus 343 -FG-----------~a~avFq~C~I~~~~~~~~~~g~ITAq~r~~~~~~tGfvf~~C~it~~~~~~~~~g~~~~yLGRPW 410 (502)
T PLN02916 343 -FG-----------DAAVVFQNCDIFVRRPMDHQGNMITAQGRDDPHENTGISIQHSRVRASPEFEAVKGRFKSFLGRPW 410 (502)
T ss_pred -cc-----------CceEEEecCEEEEecCCCCCcceEEecCCCCCCCCcEEEEEeeEEecCccccccccccceEeecCC
Confidence 11 345677777775321 012222221 2223457788888887653110 112222222
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 411 ~~ysrvVf~~t~~~~ 425 (502)
T PLN02916 411 KKYSRTVFLKTDLDG 425 (502)
T ss_pred CCCceEEEEecccCC
Confidence 345667777777666
No 64
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=97.13 E-value=0.085 Score=56.88 Aligned_cols=138 Identities=12% Similarity=0.092 Sum_probs=78.8
Q ss_pred EEEeeecEEEEeEEEEeCCC----ceEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPS----WNVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~----~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|+.. -.+- ....+...+.+|+|.... |-+... ...-..++|+|...=|-| +
T Consensus 367 ~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~Q-----DTLy~~-~~Rqyy~~C~I~GtVDFI-F- 438 (596)
T PLN02745 367 FVALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQ-----DTLYAQ-THRQFYRSCVITGTIDFI-F- 438 (596)
T ss_pred EEEEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecc-----cccccC-CCcEEEEeeEEEeeccEE-e-
Confidence 33467789999999998643 1122 245788888888888643 434433 334678888888654422 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-C
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-G 336 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g 336 (480)
| .-...++||++.... ..-|...+ .....-..+.|.||++.+..... ..+++=|+. .
T Consensus 439 -G-----------~a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~Gfvf~~c~i~~~~~~~~~~~~~~~yLGRPW~ 506 (596)
T PLN02745 439 -G-----------DAAAIFQNCLIFVRKPLPNQQNTVTAQGRVDKFETTGIVLQNCRIAPDEDLKPVKTEVKSYLGRPWK 506 (596)
T ss_pred -c-----------ceeEEEEecEEEEecCCCCCCceEEecCCCCCCCCceEEEEeeEEecCccccccccccceeccCCCC
Confidence 1 356677788776421 01222222 11223457888888887653211 112332332 3
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|.+..|.+
T Consensus 507 ~ysrvv~~~s~l~~ 520 (596)
T PLN02745 507 EFSRTIVMESTIED 520 (596)
T ss_pred CCccEEEEecccCC
Confidence 45667777777765
No 65
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=97.12 E-value=0.088 Score=56.71 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=77.3
Q ss_pred EEEEeeecEEEEeEEEEeCCC----ceEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 192 IEIMYSQNIQISNLTLINSPS----WNVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~----~~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
-.....+++..+|++|.|... -.+-+ ...+...+.+|+|... .|-+.... ..-..++|+|...=|-|
T Consensus 354 T~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-- 425 (587)
T PLN02484 354 SFAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGY-----QDTLYVHS-NRQFFRECDIYGTVDFI-- 425 (587)
T ss_pred EEEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEecc-----CcccccCC-CcEEEEecEEEecccee--
Confidence 344466788888999988743 12222 3567788888888863 34444433 34567888887654422
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCce----EEEEeecCCC-
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESG----VRIKTAVGRG- 335 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~G----i~i~s~~~~~- 335 (480)
.| .-...++||++.... ..-|.--+. ....-..+.|.||++.+...- -..+++=|+.
T Consensus 426 -FG-----------~a~avfq~C~i~~~~~~~~~~~~ITAq~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRPW 493 (587)
T PLN02484 426 -FG-----------NAAVVLQNCSIYARKPMAQQKNTITAQNRKDPNQNTGISIHACRILAASDLAASKGSFPTYLGRPW 493 (587)
T ss_pred -cc-----------cceeEEeccEEEEecCCCCCceEEEecCCCCCCCCcEEEEEeeEEecCCccccccCccceeccCCC
Confidence 11 345677777776421 012332221 122345788888888764310 0122232332
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 494 ~~ysrvV~~~s~i~~ 508 (587)
T PLN02484 494 KLYSRTVYMMSYMGD 508 (587)
T ss_pred CCCceEEEEecccCC
Confidence 345667777777766
No 66
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=97.05 E-value=0.073 Score=56.76 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=72.3
Q ss_pred EeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCC
Q 011659 195 MYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269 (480)
Q Consensus 195 ~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg 269 (480)
...+++..+|++|+|.... .+- ....+...+.+|+|.... |-+.... ..-..++|.|...=|-| + |
T Consensus 309 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~Q-----DTLy~~~-~Rqyy~~C~I~GtVDFI-F--G 379 (539)
T PLN02995 309 IEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQ-----DTLMVHS-QRQFYRECYIYGTVDFI-F--G 379 (539)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEeccc-----chhccCC-CceEEEeeEEeeccceE-e--c
Confidence 4567888888898887531 222 234677788888888643 3333332 33467788887654422 1 1
Q ss_pred CCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-Cce
Q 011659 270 WDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-GFV 338 (480)
Q Consensus 270 ~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g~v 338 (480)
.-...++||++..-. ..-|.--+ .....-..+.|.||++.+..... ..+++-|+. +.-
T Consensus 380 -----------~a~avf~~C~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRPW~~y 448 (539)
T PLN02995 380 -----------NAAAVFQNCIILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVRTVKTYMGRPWMKF 448 (539)
T ss_pred -----------ccceEEeccEEEEecCCCCCcceEecCCCCCCCCCceEEEEeeEEecCCcccccccccceeccCCCCCC
Confidence 245567777776421 01122211 11223457778888887643210 112222332 334
Q ss_pred ecEEEEeeEecc
Q 011659 339 KDVYVRRMTMKT 350 (480)
Q Consensus 339 ~nI~~~ni~~~~ 350 (480)
..+.|-+..|.+
T Consensus 449 srvv~~~t~~~~ 460 (539)
T PLN02995 449 SRTVVLQTYLDN 460 (539)
T ss_pred cceEEEeccccC
Confidence 556777776665
No 67
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=97.05 E-value=0.094 Score=56.56 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=71.5
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|.... .+-+ ...+...+.+|+|... .|-+.... ..-..++|.|...=|-|-
T Consensus 357 ~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~-----QDTLy~~~-~rq~y~~c~I~GtvDFIF-- 428 (587)
T PLN02313 357 VAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAY-----QDTLYVHS-NRQFFVKCHITGTVDFIF-- 428 (587)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecc-----cchhccCC-CcEEEEeeEEeeccceec--
Confidence 334567888889999887432 2222 3567777788877753 34344332 334677777776544321
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEE-cccccCceeEEEEEeeEEeCCCceE----EEEeecCCC-C
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIAL-GSEMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-G 336 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~i-gs~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g 336 (480)
| .-...++||.+.... ..-|.. |......-..+.|.||++.+...-. ..+++-|+. .
T Consensus 429 -G-----------~a~avfq~c~i~~r~~~~~~~~~iTAqgr~~~~~~tG~v~~~c~i~~~~~~~~~~~~~~~yLGRPW~ 496 (587)
T PLN02313 429 -G-----------NAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWK 496 (587)
T ss_pred -c-----------ceeEEEEccEEEEecCCCCCcceEEecCCCCCCCCceEEEEecEEecCCccccccccchhhccCCCC
Confidence 1 345677777776321 011222 1112223456777777776653211 112222222 2
Q ss_pred ceecEEEEeeEecc
Q 011659 337 FVKDVYVRRMTMKT 350 (480)
Q Consensus 337 ~v~nI~~~ni~~~~ 350 (480)
.-..+.|-+..|.+
T Consensus 497 ~ysr~v~~~s~i~~ 510 (587)
T PLN02313 497 EYSRTVIMQSDISD 510 (587)
T ss_pred CCccEEEEecccCC
Confidence 34455666665555
No 68
>PLN02314 pectinesterase
Probab=97.04 E-value=0.078 Score=57.20 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=73.7
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|.... .+- ....+...+.+|+|... .|-+...+ ..-..++|+|...=|-| +
T Consensus 360 ~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~-----QDTLy~~~-~rq~y~~C~I~GtvDFI-F- 431 (586)
T PLN02314 360 FAAAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAF-----QDTLYAHS-NRQFYRDCDITGTIDFI-F- 431 (586)
T ss_pred EEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEec-----cchheeCC-CCEEEEeeEEEecccee-c-
Confidence 344677888899999987431 122 23567778888888863 33343332 34567778877654422 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCceEEEEeecCCC-Cceec
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKD 340 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~n 340 (480)
| .-...++||.+.... ...|.--+. ....-..+.|.||++.+... +..+++=|+. ..-..
T Consensus 432 -G-----------~a~avf~~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~~-~~~~~yLGRpW~~ysr 498 (586)
T PLN02314 432 -G-----------NAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQRCTISAFGN-LTAPTYLGRPWKDFST 498 (586)
T ss_pred -c-----------CceeeeeccEEEEecCCCCCCceEecCCCCCCCCCCEEEEEeeEEecCCc-ccccccccCCCCCCce
Confidence 1 345677777776321 012222221 12334567788888876531 1222332322 33445
Q ss_pred EEEEeeEecc
Q 011659 341 VYVRRMTMKT 350 (480)
Q Consensus 341 I~~~ni~~~~ 350 (480)
++|.+..|.+
T Consensus 499 ~v~~~s~i~~ 508 (586)
T PLN02314 499 TVIMQSYIGS 508 (586)
T ss_pred EEEEecccCC
Confidence 6666666665
No 69
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=97.01 E-value=0.025 Score=55.35 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=51.3
Q ss_pred CCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee
Q 011659 187 TRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV 266 (480)
Q Consensus 187 ~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai 266 (480)
.|...|.++++++.+|.+-.|.-- ..+|....+++..|++.+++. -.-|.|...+.+..|+++..+..--+.++
T Consensus 148 ~rGnGI~vyNa~~a~V~~ndisy~-rDgIy~~~S~~~~~~gnr~~~-----~RygvHyM~t~~s~i~dn~s~~N~vG~AL 221 (408)
T COG3420 148 ERGNGIYVYNAPGALVVGNDISYG-RDGIYSDTSQHNVFKGNRFRD-----LRYGVHYMYTNDSRISDNSSRDNRVGYAL 221 (408)
T ss_pred hccCceEEEcCCCcEEEcCccccc-cceEEEcccccceecccchhh-----eeeeEEEEeccCcEeecccccCCcceEEE
Confidence 344456666666666655444221 245555555555555555553 23445555555555555555544444444
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCCcceEEE
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~i 301 (480)
.- ++++.|+|+.-++...+||-+
T Consensus 222 My------------s~~l~V~~nrS~Gnrd~Gill 244 (408)
T COG3420 222 MY------------SDRLKVSDNRSSGNRDHGILL 244 (408)
T ss_pred EE------------eccEEEEcCcccCccccceee
Confidence 33 556666666655544445544
No 70
>PLN02197 pectinesterase
Probab=97.00 E-value=0.11 Score=55.79 Aligned_cols=138 Identities=7% Similarity=0.046 Sum_probs=73.8
Q ss_pred EEEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeec
Q 011659 193 EIMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVK 267 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~ 267 (480)
.....+++..+|++|+|+... .+-+ ...+...+.+|+|... .|-+.... ..-..++|+|...=|-| +
T Consensus 359 ~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~Gy-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F- 430 (588)
T PLN02197 359 VQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGY-----QDTLYVNN-GRQFYRNIVVSGTVDFI-F- 430 (588)
T ss_pred EEEECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEec-----CcceEecC-CCEEEEeeEEEeccccc-c-
Confidence 344677888999999986431 2222 3567788888888863 34444433 34567788887654422 1
Q ss_pred CCCCccCcccCCCceeEEEEEEEEeCCCc----ce-EEEccc-c-cCceeEEEEEeeEEeCCCc----eEEEEeecCCC-
Q 011659 268 SGWDQYGIAYGMPTKQLIIRRLTCISPFS----AV-IALGSE-M-SGGIQDVRAEDITAIDSES----GVRIKTAVGRG- 335 (480)
Q Consensus 268 sg~~~~g~~~~~~~~ni~I~n~~~~~~~~----~g-i~igs~-~-~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~~~- 335 (480)
| .....++||++..... .+ |.--+. . ...-..+.|.||++.+... ....+++=|+.
T Consensus 431 -G-----------~a~avfq~C~i~~r~~~~~~~~~iTAqgr~~~~~~~tG~vf~~C~it~~~~~~~~~~~~~~yLGRPW 498 (588)
T PLN02197 431 -G-----------KSATVIQNSLIVVRKGSKGQYNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLTAERLTVASYLGRPW 498 (588)
T ss_pred -c-----------ceeeeeecCEEEEecCCCCCceeEECCCCCCCCCCCcEEEEEccEEecCCcccccccccccccCCCC
Confidence 1 2346777777653210 01 111111 1 1233567888888876431 11123333332
Q ss_pred CceecEEEEeeEecc
Q 011659 336 GFVKDVYVRRMTMKT 350 (480)
Q Consensus 336 g~v~nI~~~ni~~~~ 350 (480)
..-..+.|.+..|.+
T Consensus 499 ~~ysrvV~~~s~~~~ 513 (588)
T PLN02197 499 KKFSTTVIISTEIGD 513 (588)
T ss_pred CCCceEEEEecccCC
Confidence 345666677666665
No 71
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=96.99 E-value=0.1 Score=55.71 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=72.6
Q ss_pred EEeeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecC
Q 011659 194 IMYSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~s 268 (480)
....+++..+|++|+|.... .+- ....+.+.+.+|+|.... |-+... +..-..++|.|...=|-| +
T Consensus 313 ~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~Q-----DTLy~~-~~Rqyy~~C~I~GtVDFI-F-- 383 (541)
T PLN02416 313 AVSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQ-----DTLYVH-SFRQFYRECDIYGTIDYI-F-- 383 (541)
T ss_pred EEECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEeccc-----chhccC-CCceEEEeeEEeecccee-e--
Confidence 34577899999999987432 121 234677788888887643 333332 234567788887654432 1
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCCc----ce-EEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-Cc
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPFS----AV-IALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-GF 337 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~~----~g-i~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g~ 337 (480)
| .-...++||++..-.. .+ |.--+ .....-..+.|.||++.+...-. ..+++-|+. ..
T Consensus 384 G-----------~a~avfq~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRPW~~ 452 (541)
T PLN02416 384 G-----------NAAVVFQACNIVSKMPMPGQFTVITAQSRDTPDEDTGISIQNCSILATEDLYSNSNSVKSYLGRPWRV 452 (541)
T ss_pred c-----------cceEEEeccEEEEecCCCCCceEEECCCCCCCCCCCEEEEEeeEEecCCccccccccccccccCCCCC
Confidence 1 3456777777764210 01 11111 11223456778888877543110 112222322 33
Q ss_pred eecEEEEeeEecc
Q 011659 338 VKDVYVRRMTMKT 350 (480)
Q Consensus 338 v~nI~~~ni~~~~ 350 (480)
-..+.|.+..|.+
T Consensus 453 ~sr~v~~~s~i~~ 465 (541)
T PLN02416 453 YSRTVVLESYIDD 465 (541)
T ss_pred CccEEEEecccCC
Confidence 4566666666665
No 72
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=96.89 E-value=0.23 Score=52.12 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=72.5
Q ss_pred EEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecC
Q 011659 194 IMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~s 268 (480)
....+++..+|++|+|.... .+-+ ...+...+.+|+|... .|-+... +..-..++|.|...=|-| +
T Consensus 280 ~v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~Gy-----QDTLy~~-~~RqyyrdC~I~GtVDFI-F-- 350 (509)
T PLN02488 280 ASNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGY-----QDALYPH-RDRQFYRECFITGTVDFI-C-- 350 (509)
T ss_pred EEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecc-----CcceeeC-CCCEEEEeeEEeeccceE-e--
Confidence 34466788888888887431 2222 3467778888888753 3444433 344567778777654432 1
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEccc-ccCceeEEEEEeeEEeCCCceE----EEEeecCCC-Cc
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSE-MSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-GF 337 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~-~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g~ 337 (480)
| .-...++||.+..-. ..-|.-.+. ....-..+.|.||++....... ..+++=|+. ..
T Consensus 351 G-----------~a~avFq~C~I~sr~~~~~~~~~ITAq~R~~~~~~tGfvf~~C~it~~~~~~~~~~~~~~YLGRPW~~ 419 (509)
T PLN02488 351 G-----------NAAAVFQFCQIVARQPMMGQSNVITAQSRESKDDNSGFSIQKCNITASSDLDPVKATVKTYLGRPWRK 419 (509)
T ss_pred c-----------ceEEEEEccEEEEecCCCCCCEEEEeCCCCCCCCCcEEEEEeeEEecCCcccccccccceeecCCCCC
Confidence 1 345677777776421 011222221 1123456777888777653211 122332332 33
Q ss_pred eecEEEEeeEecc
Q 011659 338 VKDVYVRRMTMKT 350 (480)
Q Consensus 338 v~nI~~~ni~~~~ 350 (480)
-+.+.|-+..|.+
T Consensus 420 ySrvVf~~s~i~~ 432 (509)
T PLN02488 420 YSTVAVLQSFIGD 432 (509)
T ss_pred CccEEEEeccCCC
Confidence 4556666666665
No 73
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=96.81 E-value=0.11 Score=55.69 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=75.0
Q ss_pred EEeeecEEEEeEEEEeCCCc----eEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecC
Q 011659 194 IMYSQNIQISNLTLINSPSW----NVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKS 268 (480)
Q Consensus 194 ~~~~~nv~I~~v~i~ns~~~----~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~s 268 (480)
....+++..+|++|+|.... .+-+ ...+...+.+|+|... .|-+.... ..-..++|.|...=|-| +
T Consensus 343 ~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~-----QDTLy~~~-~Rqyy~~C~I~GtVDFI-F-- 413 (572)
T PLN02990 343 AINGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGY-----QDTLYVHS-HRQFFRDCTVSGTVDFI-F-- 413 (572)
T ss_pred EEEcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecc-----cchhccCC-CcEEEEeeEEecccceE-c--
Confidence 34567888999999987532 2222 3567788888888863 34344332 34567888887654432 1
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCCc----ce-EEEcc-cccCceeEEEEEeeEEeCCCceEE----EEeecCCC-Cc
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPFS----AV-IALGS-EMSGGIQDVRAEDITAIDSESGVR----IKTAVGRG-GF 337 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~~----~g-i~igs-~~~~~v~nI~v~n~~~~~~~~Gi~----i~s~~~~~-g~ 337 (480)
| .-...++||++..-.. .+ |.--+ .....-..+.|.||++.+...... .+++=|+. ..
T Consensus 414 G-----------~a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~C~it~~~~~~~~~~~~~~yLGRpW~~ 482 (572)
T PLN02990 414 G-----------DAKVVLQNCNIVVRKPMKGQSCMITAQGRSDVRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKE 482 (572)
T ss_pred c-----------CceEEEEccEEEEecCCCCCceEEEeCCCCCCCCCceEEEEeeEEecCccccccccccceEeecCCCC
Confidence 1 2456777777763210 01 22211 112234577888888877532111 12222222 33
Q ss_pred eecEEEEeeEecc
Q 011659 338 VKDVYVRRMTMKT 350 (480)
Q Consensus 338 v~nI~~~ni~~~~ 350 (480)
-..+.|.+..|.+
T Consensus 483 ysrvV~~~s~i~~ 495 (572)
T PLN02990 483 FSRTIIMGTTIDD 495 (572)
T ss_pred CceEEEEecccCC
Confidence 4567777777665
No 74
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=96.70 E-value=0.2 Score=50.53 Aligned_cols=54 Identities=13% Similarity=0.229 Sum_probs=36.5
Q ss_pred EEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCC-eeeee-eecccccceEEEeeCcEEEec
Q 011659 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTG-SFNLTSHFTLFLHKDAVLLAS 121 (480)
Q Consensus 53 ~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G-~Y~~~-~l~l~sn~~l~~~~ga~i~~~ 121 (480)
=.|+.|=..|+. | +.+||+.= ++|.+-|| +|.+. ++.|++...+. .-||+++..
T Consensus 44 Eqvkt~~~~P~e--D----le~~I~~h--------aKVaL~Pg~~Y~i~~~V~I~~~cYIi-GnGA~V~v~ 99 (386)
T PF01696_consen 44 EQVKTYWMEPGE--D----LEEAIRQH--------AKVALRPGAVYVIRKPVNIRSCCYII-GNGATVRVN 99 (386)
T ss_pred EeEEEEEcCCCc--C----HHHHHHhc--------CEEEeCCCCEEEEeeeEEecceEEEE-CCCEEEEEe
Confidence 345667777765 5 55666532 35676666 59875 99999999884 458888763
No 75
>PF12218 End_N_terminal: N terminal extension of bacteriophage endosialidase; InterPro: IPR024429 This entry represents the N-terminal extension domain of endosialidases which is approximately 70 amino acids in length. The two N-terminal domains (this domain and the beta propeller) assemble in the compact 'cap' whereas the C-terminal domain forms an extended tail-like structure. The very N-terminal part of the 'cap' region (residues 246 to 312) holds the only alpha-helix of the protein and is presumably the residual part of the deleted N-terminal head-binding domain [].; PDB: 3JU4_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=96.67 E-value=0.0023 Score=46.13 Aligned_cols=37 Identities=27% Similarity=0.361 Sum_probs=22.6
Q ss_pred cCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCC-eeeeeee
Q 011659 60 GVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLTGSF 102 (480)
Q Consensus 60 A~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G-~Y~~~~l 102 (480)
|+|||++|||+||.+|+++. ..+.++=-.| ||.+.+|
T Consensus 1 A~GDGvtdDt~A~~a~l~a~------~~g~~IDg~GlTykVs~l 38 (67)
T PF12218_consen 1 AKGDGVTDDTAAITAALEAS------PVGRKIDGAGLTYKVSSL 38 (67)
T ss_dssp ---CCCCE-HHHHHHHHHHS-------TTS-EE-TT-EEEESS-
T ss_pred CCCccccCcHHHHHHHHhcc------CCCeEEecCCceEEEeeC
Confidence 78999999999999999975 2334444555 6877654
No 76
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=95.85 E-value=2 Score=42.10 Aligned_cols=139 Identities=16% Similarity=0.101 Sum_probs=71.3
Q ss_pred EEEeeecEEEEeEEEEeCCCceE---------EEeccccEEEEeEEEECCCCCCCCCeEecCCC----------c-cEEE
Q 011659 193 EIMYSQNIQISNLTLINSPSWNV---------HPVYSSSVIVQGITILAPVTSPNTDGINPDSC----------T-NTRI 252 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~~~~i---------~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s----------~-nV~I 252 (480)
.+..-+++..++++++|....+. .....+.+.+++|++.... |-+....+ + .-.+
T Consensus 184 ~~v~~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~Q-----dTlFv~~~~~~~~~~tn~~~R~yf 258 (405)
T COG4677 184 FWVQNNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQ-----DTLFVGNSGVQNRLETNRQPRTYF 258 (405)
T ss_pred heeecCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeecc-----ceEEecCCCCccccccCcchhhhe
Confidence 34455667777777777654332 2346677788888887633 33333222 1 4567
Q ss_pred EecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC----cceEEE-cccccCceeEEEEEeeEEeCCCc--e
Q 011659 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF----SAVIAL-GSEMSGGIQDVRAEDITAIDSES--G 325 (480)
Q Consensus 253 ~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~----~~gi~i-gs~~~~~v~nI~v~n~~~~~~~~--G 325 (480)
+||+|+..-|-| .++ --..+.+|.+...+ ..|.-. -|...+.-....+-|++|..... -
T Consensus 259 tNsyI~GdvDfI-fGs-------------gtaVFd~c~i~~~d~r~~~~gYIfApST~~~~~YGflalNsrfna~g~~~s 324 (405)
T COG4677 259 TNSYIEGDVDFI-FGS-------------GTAVFDNCEIQVVDSRTQQEGYIFAPSTLSGIPYGFLALNSRFNASGDAGS 324 (405)
T ss_pred ecceecccceEE-ecc-------------ceEEeccceEEEeccCCCcceeEeccCCCCCCceeEEEEeeeeecCCCCCe
Confidence 788887543422 222 23455566555322 012211 22223345567777888765543 1
Q ss_pred EEE-EeecCCCCceecEEEEeeEecc
Q 011659 326 VRI-KTAVGRGGFVKDVYVRRMTMKT 350 (480)
Q Consensus 326 i~i-~s~~~~~g~v~nI~~~ni~~~~ 350 (480)
+.+ ..|.......-.++|+|..|..
T Consensus 325 ~~LGRpwd~~a~~nGQvVirds~m~e 350 (405)
T COG4677 325 AQLGRPWDVDANTNGQVVIRDSVMGE 350 (405)
T ss_pred eeecCccccccccCceEEEEeccccc
Confidence 222 1232222334457777777765
No 77
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=95.77 E-value=1.7 Score=44.01 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=46.6
Q ss_pred ccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceE
Q 011659 221 SSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299 (480)
Q Consensus 221 ~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi 299 (480)
.+|++.|+++...+ ...|+-+.+..++++.+|.|.+ ...|+... ....|+.|+|.+.+ .|+
T Consensus 121 ~~VtF~ni~F~~~~---~~~g~~f~~~t~~~~hgC~F~gf~g~cl~~~--------------~~~~VrGC~F~~C~-~gi 182 (386)
T PF01696_consen 121 EGVTFVNIRFEGRD---TFSGVVFHANTNTLFHGCSFFGFHGTCLESW--------------AGGEVRGCTFYGCW-KGI 182 (386)
T ss_pred eeeEEEEEEEecCC---ccceeEEEecceEEEEeeEEecCcceeEEEc--------------CCcEEeeeEEEEEE-EEe
Confidence 45666666666532 2345556566677777777765 22333222 34567777777554 344
Q ss_pred EEcccccCceeEEEEEeeEEeCCCceE
Q 011659 300 ALGSEMSGGIQDVRAEDITAIDSESGV 326 (480)
Q Consensus 300 ~igs~~~~~v~nI~v~n~~~~~~~~Gi 326 (480)
.- .+...+.|++|+|....-|+
T Consensus 183 ~~-----~~~~~lsVk~C~FekC~igi 204 (386)
T PF01696_consen 183 VS-----RGKSKLSVKKCVFEKCVIGI 204 (386)
T ss_pred ec-----CCcceEEeeheeeeheEEEE
Confidence 32 24556677777776665454
No 78
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=95.35 E-value=2.2 Score=41.14 Aligned_cols=56 Identities=18% Similarity=0.144 Sum_probs=27.2
Q ss_pred ecEEEEeEEEEeCCCceEEE----eccccEEEEeEEEECCCCCCCCCeEecC---CCccEEEEecEEe
Q 011659 198 QNIQISNLTLINSPSWNVHP----VYSSSVIVQGITILAPVTSPNTDGINPD---SCTNTRIEDCYIV 258 (480)
Q Consensus 198 ~nv~I~~v~i~ns~~~~i~~----~~~~nv~i~~~~i~~~~~~~n~DGI~~~---~s~nV~I~n~~i~ 258 (480)
.|++|+++++..+.+ ++.- ..-+++.|.++++.. ...|.|... .-++++|++-.|.
T Consensus 151 rnl~id~itv~~any-ailrqgfhnq~dgaritn~rfs~----lqgdaiewnvaindr~ilisdhvie 213 (464)
T PRK10123 151 RNLTIDNLTVSHANY-AILRQGFHNQIIGANITNCKFSD----LQGDAIEWNVAINDRDILISDHVIE 213 (464)
T ss_pred hccEEccEEEeeccH-HHHhhhhhhccccceeecccccc----ccCceEEEEEEecccceeeehhehe
Confidence 467777777766532 2111 122344455554443 345555542 2345555554443
No 79
>PF09251 PhageP22-tail: Salmonella phage P22 tail-spike; InterPro: IPR015331 This entry is represented by the Bacteriophage P22, Gp9, tailspike protein (TSP). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The TSP C-terminal domain adopts a structure that consists of a single-stranded right-handed beta-helix, which in turn is made of parallel beta-strands and short turns. They are required for recognition of the 0-antigenic repeating units of the cell surface, and for subsequent infection of the bacterial cell by the phage []. ; PDB: 1QA3_A 1QRB_A 2XC1_C 1QA2_A 1TYX_A 2VFQ_A 2VFO_A 1TYU_A 2VFN_A 1QA1_A ....
Probab=94.69 E-value=3.2 Score=42.22 Aligned_cols=65 Identities=28% Similarity=0.386 Sum_probs=31.1
Q ss_pred ceeEEEEEEEEeCCCcceEEEccccc--------C-----------ceeEEEEEeeEEeCCCceEEEEeecCCCCceecE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMS--------G-----------GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI 341 (480)
+.|..++|.....+.-+|+.+|+.+. + -..|=.|+|+...++ .|+.+. +.|.+++|+||
T Consensus 263 nYnLqF~d~~~i~~~~DG~Dl~aDtg~~~~~dR~~D~~laqYp~~qLPtnHiidNi~~~~~-lGVG~~-~DG~~~yvsni 340 (549)
T PF09251_consen 263 NYNLQFRDSVTISPVWDGFDLGADTGMGPETDRPGDYPLAQYPWHQLPTNHIIDNILVRGS-LGVGIG-MDGKGGYVSNI 340 (549)
T ss_dssp EBS-EEEEEEEES-SSESEEE-SS-SSSTTS--TTS--TTTS-TT------EEEEEEEES--SSESCE-EECCS-EEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCceEeeE
Confidence 55777777776666557777776421 0 023445555555555 343332 23456777777
Q ss_pred EEEeeE
Q 011659 342 YVRRMT 347 (480)
Q Consensus 342 ~~~ni~ 347 (480)
+.+++.
T Consensus 341 ~~~d~~ 346 (549)
T PF09251_consen 341 TVQDCA 346 (549)
T ss_dssp EEES-S
T ss_pred Eeeccc
Confidence 766654
No 80
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=94.54 E-value=0.46 Score=45.40 Aligned_cols=73 Identities=11% Similarity=0.051 Sum_probs=42.8
Q ss_pred eeEEEEEEEEeCCCcceEEEcccc-cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEE
Q 011659 282 KQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358 (480)
Q Consensus 282 ~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 358 (480)
.+.+|+||+|.+..+.||.+-... ...+.+++|+++.++....|+.+.... .+ +.+ .++|..+++...+|.+.
T Consensus 122 s~~tI~Nntf~~~~~~GI~v~g~~~~~~i~~~vI~GN~~~~~~~Gi~i~~~~--~~-~~n-~I~NN~I~~N~~Gi~~~ 195 (246)
T PF07602_consen 122 SSPTIANNTFTNNGREGIFVTGTSANPGINGNVISGNSIYFNKTGISISDNA--AP-VEN-KIENNIIENNNIGIVAI 195 (246)
T ss_pred CCcEEEeeEEECCccccEEEEeeecCCcccceEeecceEEecCcCeEEEccc--CC-ccc-eeeccEEEeCCcCeEee
Confidence 366777777777555677664332 446777777777777777777775432 12 222 33555555444465543
No 81
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=93.54 E-value=2.4 Score=39.51 Aligned_cols=129 Identities=17% Similarity=0.186 Sum_probs=65.4
Q ss_pred cEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEE
Q 011659 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300 (480)
Q Consensus 222 nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~ 300 (480)
..+++|+.|-. +..||||..+ +-+|+|+.+.. +.|++.++.. ...++|.+.-..+...--|.
T Consensus 62 GatlkNvIiG~----~~~dGIHC~G--~Ctl~NVwwedVcEDA~T~kg~-----------~~~~~I~ggga~~A~DKV~Q 124 (215)
T PF03211_consen 62 GATLKNVIIGA----NQADGIHCKG--SCTLENVWWEDVCEDAATFKGD-----------GGTVTIIGGGARNASDKVFQ 124 (215)
T ss_dssp TEEEEEEEETS----S-TT-EEEES--CEEEEEEEESS-SSESEEEESS-----------EEEEEEESTEEEEEEEEEEE
T ss_pred CCEEEEEEEcC----CCcCceEEcC--CEEEEEEEecccceeeeEEcCC-----------CceEEEeCCcccCCCccEEE
Confidence 45666665532 4568888875 77888888865 8888888874 22555555444422111122
Q ss_pred EcccccCceeEEEEEeeEEeCCCceEEEEeecC---CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeE
Q 011659 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG---RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVI 377 (480)
Q Consensus 301 igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~---~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i 377 (480)
... --.++|+|-+.. +.|--+.+-.+ .++.=|++.+++........-+-|...|.+. .+|
T Consensus 125 ~Ng-----~Gtv~I~nF~a~--d~GKl~RSCGnC~~~~~~~r~v~v~~~~~~~~~~~~giN~N~gD~----------ati 187 (215)
T PF03211_consen 125 HNG-----GGTVTIKNFYAE--DFGKLYRSCGNCSNNGGPRRHVVVNNVVAGPGNSLVGINRNYGDT----------ATI 187 (215)
T ss_dssp E-S-----SEEEEEEEEEEE--EEEEEEEE-TTETS----EEEEEEEEEEEEEEEEEEEEEEGGTTT----------EEE
T ss_pred ecC-----ceeEEEEeEEEc--CCCEEEEeCCCCCCCCCcceEEEEeeEEecCCcEEEEEECCCCCe----------EEE
Confidence 221 124556663333 23444444321 1123466777766554434445566666431 256
Q ss_pred EeEEEEE
Q 011659 378 QNINYRD 384 (480)
Q Consensus 378 ~nIt~~n 384 (480)
++++++.
T Consensus 188 ~~~~~~~ 194 (215)
T PF03211_consen 188 SNSCIKG 194 (215)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 6666665
No 82
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=92.10 E-value=0.18 Score=34.35 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=18.6
Q ss_pred EEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEe
Q 011659 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIV 258 (480)
Q Consensus 215 i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~ 258 (480)
|.+..+.+.+|++.++.. +.+||++..+++-+|+++.+.
T Consensus 2 I~l~~s~~~~i~~N~i~~-----~~~GI~~~~s~~n~i~~N~~~ 40 (44)
T TIGR03804 2 IYLESSSNNTLENNTASN-----NSYGIYLTDSSNNTLSNNTAS 40 (44)
T ss_pred EEEEecCCCEEECcEEeC-----CCCEEEEEeCCCCEeECCEEE
Confidence 344444444555555543 334555555444445444443
No 83
>PF03211 Pectate_lyase: Pectate lyase; InterPro: IPR004898 Pectate lyase is responsible for the maceration and soft-rotting of plant tissue. It catalyses the eliminative cleavage of pectate to produce oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends. Pectate lyase is an extracellular enzyme and is induced by pectin. It is subject to self-catabolite repression, and has been implicated in plant disease. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail []. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization.; GO: 0030570 pectate lyase activity, 0005576 extracellular region; PDB: 3T9G_B 3B90_B 3B8Y_A 3B4N_B 1EE6_A.
Probab=92.07 E-value=6 Score=36.98 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=86.1
Q ss_pred eeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCc-cEEEEecEEeeCCceeeecCCCCccC
Q 011659 196 YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCT-NTRIEDCYIVSGDDCVAVKSGWDQYG 274 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~-nV~I~n~~i~~gdD~iai~sg~~~~g 274 (480)
--+..+|+|+.|-.+...+||... +.+|+|+.++. -..|.+.+.... .++|.+.-.+..+|=|--..+
T Consensus 59 le~GatlkNvIiG~~~~dGIHC~G--~Ctl~NVwwed----VcEDA~T~kg~~~~~~I~ggga~~A~DKV~Q~Ng----- 127 (215)
T PF03211_consen 59 LEDGATLKNVIIGANQADGIHCKG--SCTLENVWWED----VCEDAATFKGDGGTVTIIGGGARNASDKVFQHNG----- 127 (215)
T ss_dssp EETTEEEEEEEETSS-TT-EEEES--CEEEEEEEESS-----SSESEEEESSEEEEEEESTEEEEEEEEEEEE-S-----
T ss_pred ecCCCEEEEEEEcCCCcCceEEcC--CEEEEEEEecc----cceeeeEEcCCCceEEEeCCcccCCCccEEEecC-----
Confidence 346789999999777778999887 88999999986 457888888766 899999998887776554443
Q ss_pred cccCCCceeEEEEEEEEeCCCcceEEEccc---cc--CceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEe
Q 011659 275 IAYGMPTKQLIIRRLTCISPFSAVIALGSE---MS--GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR 345 (480)
Q Consensus 275 ~~~~~~~~ni~I~n~~~~~~~~~gi~igs~---~~--~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~n 345 (480)
.-.+.|.|.+... .|--+-|- .. +.-+.+.+++........-+.|-...++...|+++.+..
T Consensus 128 ------~Gtv~I~nF~a~d---~GKl~RSCGnC~~~~~~~r~v~v~~~~~~~~~~~~giN~N~gD~ati~~~~~~~ 194 (215)
T PF03211_consen 128 ------GGTVTIKNFYAED---FGKLYRSCGNCSNNGGPRRHVVVNNVVAGPGNSLVGINRNYGDTATISNSCIKG 194 (215)
T ss_dssp ------SEEEEEEEEEEEE---EEEEEEE-TTETS----EEEEEEEEEEEEEEEEEEEEEEGGTTTEEEEEEEEEE
T ss_pred ------ceeEEEEeEEEcC---CCEEEEeCCCCCCCCCcceEEEEeeEEecCCcEEEEEECCCCCeEEEEEEEecC
Confidence 4568888866652 34322221 11 234567777765544334455666666667777777766
No 84
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=91.64 E-value=0.34 Score=32.96 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=29.6
Q ss_pred eEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC
Q 011659 241 GINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293 (480)
Q Consensus 241 GI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~ 293 (480)
||.+..+.+.+|+++.+....|+|.+.. +++.+|+++++..
T Consensus 1 GI~l~~s~~~~i~~N~i~~~~~GI~~~~------------s~~n~i~~N~~~~ 41 (44)
T TIGR03804 1 GIYLESSSNNTLENNTASNNSYGIYLTD------------SSNNTLSNNTASS 41 (44)
T ss_pred CEEEEecCCCEEECcEEeCCCCEEEEEe------------CCCCEeECCEEEc
Confidence 5777777777788888877766777765 5666777777664
No 85
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=90.57 E-value=5.4 Score=36.09 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=52.6
Q ss_pred ecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeeecCCCCccCcc
Q 011659 198 QNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIA 276 (480)
Q Consensus 198 ~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~ 276 (480)
++|.|.+-+|.+...++|.+..... +..-...++|.|++..|.. |..- ...+-|--
T Consensus 2 ~dIEIYnN~I~~T~g~GIWl~gy~~------------------~ysk~~a~nVhIhhN~fY~tGtn~-----~~~wvGGI 58 (198)
T PF08480_consen 2 DDIEIYNNTIYNTYGPGIWLFGYDG------------------SYSKDSAKNVHIHHNIFYDTGTNP-----NIDWVGGI 58 (198)
T ss_pred CceEEecceeecccCceEEEEecCC------------------CCCccccccEEEECcEeecCCcCC-----CCceeeeE
Confidence 4677777778777777776654310 0111133566666666643 2110 00000000
Q ss_pred cCCCceeEEEEEEEEeCCCcceEEEc-cc----ccCceeEEEEEeeEEeCCC
Q 011659 277 YGMPTKQLIIRRLTCISPFSAVIALG-SE----MSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 277 ~~~~~~ni~I~n~~~~~~~~~gi~ig-s~----~~~~v~nI~v~n~~~~~~~ 323 (480)
...+..|.+|+|++|.+..+.+|.-- .. ..+.-.-.+|+|+.+.++.
T Consensus 59 v~sGF~ntlIENNVfDG~y~aai~~~y~~~~~sp~gsgyttivRNNII~NT~ 110 (198)
T PF08480_consen 59 VTSGFYNTLIENNVFDGVYHAAIAQMYPDYDLSPKGSGYTTIVRNNIIVNTR 110 (198)
T ss_pred EeccccccEEEeeeecccccceEEEEecccccCCCCCceEEEEEcceEeeee
Confidence 11126777888888887654555431 11 1222334778888887763
No 86
>PLN02773 pectinesterase
Probab=90.05 E-value=7.6 Score=38.70 Aligned_cols=113 Identities=14% Similarity=0.105 Sum_probs=75.2
Q ss_pred EEeccccEEEEeEEEECCCCCC--CCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC
Q 011659 216 HPVYSSSVIVQGITILAPVTSP--NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~--n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~ 293 (480)
....++++..+|++|.|..... .+-.+.+ .+..+.+.||.|....|-+-.+. ..-.++||++.+
T Consensus 97 v~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v-~gDr~~f~~c~~~G~QDTL~~~~-------------gr~yf~~c~IeG 162 (317)
T PLN02773 97 VIVEGEDFIAENITFENSAPEGSGQAVAIRV-TADRCAFYNCRFLGWQDTLYLHY-------------GKQYLRDCYIEG 162 (317)
T ss_pred EEEECCCeEEEeeEEEeCCCCCCCcEEEEEe-cCccEEEEccEeecccceeEeCC-------------CCEEEEeeEEee
Confidence 3446789999999999975321 2333444 46889999999999888776654 246889999996
Q ss_pred CCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC--CceecEEEEeeEecccc
Q 011659 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 294 ~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
.- -+-.|. -...|++|++.....|. | +.+++. ..-....|.|+++....
T Consensus 163 ~V--DFIFG~------g~a~Fe~c~i~s~~~g~-I-TA~~r~~~~~~~GfvF~~c~it~~~ 213 (317)
T PLN02773 163 SV--DFIFGN------STALLEHCHIHCKSAGF-I-TAQSRKSSQESTGYVFLRCVITGNG 213 (317)
T ss_pred cc--cEEeec------cEEEEEeeEEEEccCcE-E-ECCCCCCCCCCceEEEEccEEecCC
Confidence 53 344452 35789999997654442 3 332211 12346899999998753
No 87
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=87.11 E-value=3.7 Score=42.37 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=12.1
Q ss_pred ceeEEEEEeeEEeCCCceEEEEe
Q 011659 308 GIQDVRAEDITAIDSESGVRIKT 330 (480)
Q Consensus 308 ~v~nI~v~n~~~~~~~~Gi~i~s 330 (480)
.++|++|.+++|.++..+|.+..
T Consensus 308 qv~nv~I~~NT~In~~~~i~~g~ 330 (425)
T PF14592_consen 308 QVKNVLIANNTFINCKSPIHFGA 330 (425)
T ss_dssp --BSEEEES-EEES-SEEEESST
T ss_pred ccceeEEecceEEccCCceEEcc
Confidence 46677777777777665555543
No 88
>PLN02480 Probable pectinesterase
Probab=87.05 E-value=31 Score=34.89 Aligned_cols=113 Identities=11% Similarity=0.061 Sum_probs=72.4
Q ss_pred EEeccccEEEEeEEEECCCC-----CCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEE
Q 011659 216 HPVYSSSVIVQGITILAPVT-----SPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~-----~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~ 289 (480)
.....++++++|++|.|... .....++-+. .+.++.+.||.|....|-+-... ..-.++||
T Consensus 127 vtV~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~QDTLy~~~-------------gR~yf~~C 193 (343)
T PLN02480 127 FTVEAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTHNTLFDYK-------------GRHYYHSC 193 (343)
T ss_pred EEEECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecccceeEeCC-------------CCEEEEeC
Confidence 34456899999999999731 1123455552 57889999999999877765443 34588899
Q ss_pred EEeCCCcceEEEcccccCceeEEEEEeeEEeCCC------ceEEEEeecCC-CCceecEEEEeeEeccc
Q 011659 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE------SGVRIKTAVGR-GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 290 ~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~------~Gi~i~s~~~~-~g~v~nI~~~ni~~~~~ 351 (480)
++++.- -+-.|. -...|+||++.... .|. | |.+++ ...-....|.|+++.+.
T Consensus 194 ~IeG~V--DFIFG~------g~a~fe~C~i~s~~~~~~~~~G~-I-TA~~r~~~~~~GfvF~~C~i~g~ 252 (343)
T PLN02480 194 YIQGSI--DFIFGR------GRSIFHNCEIFVIADRRVKIYGS-I-TAHNRESEDNSGFVFIKGKVYGI 252 (343)
T ss_pred EEEeee--eEEccc------eeEEEEccEEEEecCCCCCCceE-E-EcCCCCCCCCCEEEEECCEEccc
Confidence 998542 233442 36688999997542 122 2 22221 12335688999998864
No 89
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=84.84 E-value=23 Score=37.67 Aligned_cols=61 Identities=11% Similarity=0.146 Sum_probs=31.5
Q ss_pred eeecEEEEeEEEEeCCCc----eEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCc
Q 011659 196 YSQNIQISNLTLINSPSW----NVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDD 262 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~~----~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD 262 (480)
..+++..+|++|+|.... .+- ....+...+.+|+|... .|-+.... ..-..++|.|...=|
T Consensus 268 ~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~-----QDTLy~~~-~rqyy~~C~I~G~vD 333 (497)
T PLN02698 268 TGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGY-----QDTLYAAA-LRQFYRECDIYGTID 333 (497)
T ss_pred ECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecc-----cchheeCC-CcEEEEeeEEEeccc
Confidence 456677777777776431 111 12456666666666642 23333322 223566666664433
No 90
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=83.59 E-value=6.6 Score=35.52 Aligned_cols=73 Identities=14% Similarity=0.107 Sum_probs=33.5
Q ss_pred eeEEEEEEEEeCCCcceEEE-ccc---ccCceeEEEEEeeEEeCCCceEEEEeecC-CCCceecEEEEeeEeccccee
Q 011659 282 KQLIIRRLTCISPFSAVIAL-GSE---MSGGIQDVRAEDITAIDSESGVRIKTAVG-RGGFVKDVYVRRMTMKTMKWA 354 (480)
Q Consensus 282 ~ni~I~n~~~~~~~~~gi~i-gs~---~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~ 354 (480)
.||.|.|+++....+.||-+ |.. .....+||.|+++.|+++..--.+.-..| -...+.|..+||..++++..+
T Consensus 2 ~dIEIYnN~I~~T~g~GIWl~gy~~~ysk~~a~nVhIhhN~fY~tGtn~~~~wvGGIv~sGF~ntlIENNVfDG~y~a 79 (198)
T PF08480_consen 2 DDIEIYNNTIYNTYGPGIWLFGYDGSYSKDSAKNVHIHHNIFYDTGTNPNIDWVGGIVTSGFYNTLIENNVFDGVYHA 79 (198)
T ss_pred CceEEecceeecccCceEEEEecCCCCCccccccEEEECcEeecCCcCCCCceeeeEEeccccccEEEeeeecccccc
Confidence 35666666666655556544 221 12234466666666665532111111100 001234556666666665433
No 91
>PLN02682 pectinesterase family protein
Probab=83.21 E-value=29 Score=35.39 Aligned_cols=113 Identities=12% Similarity=0.003 Sum_probs=72.2
Q ss_pred EeccccEEEEeEEEECCCCC-----C--CCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEE
Q 011659 217 PVYSSSVIVQGITILAPVTS-----P--NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~-----~--n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~ 289 (480)
....+++..+|++|.|.... . .+-.+.+ .+....+.||.|....|-+-.+. ..-.++||
T Consensus 159 ~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v-~gDr~~fy~C~f~G~QDTLy~~~-------------gRqyf~~C 224 (369)
T PLN02682 159 AVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRI-SADTAAFYGCKFLGAQDTLYDHL-------------GRHYFKDC 224 (369)
T ss_pred EEECCCeEEEeeEEEcccccCCCCCCcccEEEEEe-cCCcEEEEcceEeccccceEECC-------------CCEEEEee
Confidence 34567899999999986421 1 1223333 46889999999999888776544 34589999
Q ss_pred EEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC--CceecEEEEeeEeccc
Q 011659 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 290 ~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
++.+.- -+-.|. -...|++|++.........-|.+++. ..-....|.|+++...
T Consensus 225 ~IeG~V--DFIFG~------g~a~Fe~C~I~s~~~~~G~ITA~~r~~~~~~~GfvF~~C~itg~ 280 (369)
T PLN02682 225 YIEGSV--DFIFGN------GLSLYEGCHLHAIARNFGALTAQKRQSVLEDTGFSFVNCKVTGS 280 (369)
T ss_pred EEcccc--cEEecC------ceEEEEccEEEEecCCCeEEecCCCCCCCCCceEEEEeeEecCC
Confidence 999653 344442 36788999997532211122333221 2335788999999874
No 92
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=82.79 E-value=33 Score=36.69 Aligned_cols=117 Identities=11% Similarity=0.152 Sum_probs=75.7
Q ss_pred EEEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC
Q 011659 215 VHPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293 (480)
Q Consensus 215 i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~ 293 (480)
......+++..+|++|.|.........+.+. .+....+.+|.|....|-+...++ .-.+++|++.+
T Consensus 307 Tv~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQDTLy~~~~-------------Rqyy~~C~I~G 373 (529)
T PLN02170 307 TVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQDSLYTHSK-------------RQFYRETDITG 373 (529)
T ss_pred EEEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccCCcceeCCC-------------CEEEEeeEEcc
Confidence 3445668899999999997533222333332 467899999999998887766543 34789999996
Q ss_pred CCcceEEEcccccCceeEEEEEeeEEeCCCc--eEEEEeecCCC--CceecEEEEeeEecccc
Q 011659 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSES--GVRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 294 ~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~--Gi~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
.- -+-.|. -...|+||.+.-... .-..-|.+++. ..-..+.|.|+++....
T Consensus 374 tV--DFIFG~------a~avFq~C~I~~~~~~~~~g~ITAq~R~~~~~~~Gfvf~~C~it~~~ 428 (529)
T PLN02170 374 TV--DFIFGN------SAVVFQSCNIAARKPSGDRNYVTAQGRSDPNQNTGISIHNCRITAES 428 (529)
T ss_pred cc--ceeccc------ceEEEeccEEEEecCCCCceEEEecCCCCCCCCceEEEEeeEEecCC
Confidence 53 344442 357889998865421 11222333322 33467899999998753
No 93
>PLN02665 pectinesterase family protein
Probab=82.09 E-value=37 Score=34.58 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=74.8
Q ss_pred EEeccccEEEEeEEEECCCCC-------CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEE
Q 011659 216 HPVYSSSVIVQGITILAPVTS-------PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRR 288 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~-------~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n 288 (480)
....++++..+|++|.|.... ..+-.+.+ ......+.||.|....|-+....+ .-.++|
T Consensus 149 v~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v-~gDka~f~~C~f~G~QDTL~~~~g-------------r~yf~~ 214 (366)
T PLN02665 149 LIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRI-SGDKAAFYNCRFIGFQDTLCDDKG-------------RHFFKD 214 (366)
T ss_pred EEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEE-cCCcEEEEcceeccccceeEeCCC-------------CEEEEe
Confidence 345678999999999996421 12233444 467899999999998887765432 457899
Q ss_pred EEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 289 ~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
|++.+.- -+-.|. -...+++|++.-...+ ...-|.+++. ..-....|.|+++.+..
T Consensus 215 CyIeG~V--DFIFG~------g~a~fe~C~i~s~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~~ 273 (366)
T PLN02665 215 CYIEGTV--DFIFGS------GKSLYLNTELHVVGDGGLRVITAQARNSEAEDSGFSFVHCKVTGTG 273 (366)
T ss_pred eEEeecc--ceeccc------cceeeEccEEEEecCCCcEEEEcCCCCCCCCCceEEEEeeEEecCC
Confidence 9999643 333443 2558888988755443 2333433322 23356789999998854
No 94
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=81.55 E-value=22 Score=37.81 Aligned_cols=116 Identities=11% Similarity=0.131 Sum_probs=74.1
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|+|.........+-+. .+....+.+|.|....|-+...++ .-.+++|++.+.
T Consensus 265 ~~v~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~QDTLy~~~~-------------rqyy~~C~I~G~ 331 (497)
T PLN02698 265 FTITGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQDTLYAAAL-------------RQFYRECDIYGT 331 (497)
T ss_pred EEEECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecccchheeCCC-------------cEEEEeeEEEec
Confidence 344668999999999997633222333332 468899999999998887766543 248889999854
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCC--CCceecEEEEeeEecccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGR--GGFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~--~g~v~nI~~~ni~~~~~~ 352 (480)
- -+-+|. -...|+||++.-... | -..-|.+++ ...-..+.|.|+++....
T Consensus 332 v--DFIFG~------a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~c~i~~~~ 386 (497)
T PLN02698 332 I--DFIFGN------AAAVFQNCYLFLRRPHGKSYNVILANGRSDPGQNTGFSLQSCRIRTSS 386 (497)
T ss_pred c--ceEecc------cceeecccEEEEecCCCCCceEEEecCCCCCCCCceEEEEeeEEecCC
Confidence 3 344443 246888888864321 1 112233332 133467899999998754
No 95
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=80.34 E-value=30 Score=37.38 Aligned_cols=114 Identities=14% Similarity=0.187 Sum_probs=75.5
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+..+.+.||.|....|-+-..++ .-.+++|++.+.-
T Consensus 326 ~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~-------------rq~y~~C~I~GtV 392 (553)
T PLN02708 326 GVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSL-------------RQFYKSCRIQGNV 392 (553)
T ss_pred EEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeeccccceeCCC-------------ceEEEeeEEeecC
Confidence 34567999999999997643233344443 468899999999998887766543 3478999999653
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCC------Cce--EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDS------ESG--VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~------~~G--i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-. ..| -.| |.+++. ..-..+.|.|+++....
T Consensus 393 --DFIFG~------a~avfq~c~i~~~~~~~~~~~~~~~~i-TA~~r~~~~~~~G~vf~~C~it~~~ 450 (553)
T PLN02708 393 --DFIFGN------SAAVFQDCAILIAPRQLKPEKGENNAV-TAHGRTDPAQSTGFVFQNCLINGTE 450 (553)
T ss_pred --CEEecC------ceEEEEccEEEEeccccCCCCCCceEE-EeCCCCCCCCCceEEEEccEEecCC
Confidence 344542 3678999999732 111 122 443322 33457899999998743
No 96
>PLN02634 probable pectinesterase
Probab=79.03 E-value=37 Score=34.42 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=70.8
Q ss_pred ccccEEEEeEEEECCCCC-----C--CCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEE
Q 011659 219 YSSSVIVQGITILAPVTS-----P--NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291 (480)
Q Consensus 219 ~~~nv~i~~~~i~~~~~~-----~--n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~ 291 (480)
..+++..+|++|.|.... . .+-.+.+ .+....+.+|.|....|-+.... ..-.++||++
T Consensus 147 ~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v-~gDra~f~~C~f~G~QDTL~~~~-------------gR~yf~~CyI 212 (359)
T PLN02634 147 YANYFTARNISFKNTAPAPMPGMQGWQAVAFRI-SGDKAFFFGCGFYGAQDTLCDDA-------------GRHYFKECYI 212 (359)
T ss_pred ECCCeEEEeCeEEeCCccCCCCCCCCceEEEEe-cCCcEEEEEeEEecccceeeeCC-------------CCEEEEeeEE
Confidence 456888899999886421 1 1223333 46789999999999888776543 3468899999
Q ss_pred eCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC--CceecEEEEeeEeccc
Q 011659 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 292 ~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
.+.- -+-.|. -...|+||++.........-+.+++. ..-....|.|+++...
T Consensus 213 eG~V--DFIFG~------g~a~Fe~C~I~s~~~~~g~ITA~~R~~~~~~~GfvF~~C~vtg~ 266 (359)
T PLN02634 213 EGSI--DFIFGN------GRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVTGT 266 (359)
T ss_pred cccc--cEEcCC------ceEEEeccEEEEecCCCcEEEeCCCCCCCCCcEEEEEcCEEcCC
Confidence 9543 344442 25578999987543222233444321 2335789999999874
No 97
>PLN02432 putative pectinesterase
Probab=78.39 E-value=50 Score=32.58 Aligned_cols=109 Identities=16% Similarity=0.103 Sum_probs=70.7
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++.++|++|.|... +....+-+. ....+.+.||.|....|-+-...+ .-.++||.+.+.-
T Consensus 91 v~a~~f~a~nlt~~Nt~g-~~~QAvAl~v~gDr~~f~~c~~~G~QDTLy~~~g-------------r~yf~~c~I~G~V- 155 (293)
T PLN02432 91 VLASDFVGRFLTIQNTFG-SSGKAVALRVAGDRAAFYGCRILSYQDTLLDDTG-------------RHYYRNCYIEGAT- 155 (293)
T ss_pred EECCCeEEEeeEEEeCCC-CCCceEEEEEcCCcEEEEcceEecccceeEECCC-------------CEEEEeCEEEecc-
Confidence 355789999999998752 222333332 468899999999988887765432 4588999999543
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC--ceEEEEeecCC--CCceecEEEEeeEecc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE--SGVRIKTAVGR--GGFVKDVYVRRMTMKT 350 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~--~Gi~i~s~~~~--~g~v~nI~~~ni~~~~ 350 (480)
-+-.|. -...|++|.+.-.. .| .| +.+++ ...-....|.|+++..
T Consensus 156 -DFIFG~------g~a~Fe~c~i~s~~~~~g-~i-tA~~r~~~~~~~Gfvf~~c~itg 204 (293)
T PLN02432 156 -DFICGN------AASLFEKCHLHSLSPNNG-AI-TAQQRTSASENTGFTFLGCKLTG 204 (293)
T ss_pred -cEEecC------ceEEEEeeEEEEecCCCC-eE-EecCCCCCCCCceEEEEeeEEcc
Confidence 344453 24688888886432 23 23 33222 1233468999999986
No 98
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=78.11 E-value=49 Score=35.63 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=74.2
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|.|.........+.+. .+..+.+.+|.|....|-+...+ ..-.+++|++.+.-
T Consensus 314 v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~-------------~Rqyy~~C~I~GtV- 379 (541)
T PLN02416 314 VSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQDTLYVHS-------------FRQFYRECDIYGTI- 379 (541)
T ss_pred EECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEecccchhccCC-------------CceEEEeeEEeecc-
Confidence 4568899999999997643333333332 46889999999999888766544 34589999999643
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||++.-... | ...-|.+++. ..-..+.|.|+++....
T Consensus 380 -DFIFG~------a~avfq~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~ 433 (541)
T PLN02416 380 -DYIFGN------AAVVFQACNIVSKMPMPGQFTVITAQSRDTPDEDTGISIQNCSILATE 433 (541)
T ss_pred -ceeecc------ceEEEeccEEEEecCCCCCceEEECCCCCCCCCCCEEEEEeeEEecCC
Confidence 344442 367888998865321 1 1222333322 23457899999998643
No 99
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=77.50 E-value=34 Score=37.71 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=74.5
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|+|.........+-+. .+....+.||.|....|-+...+ ..-.+++|++.+.-
T Consensus 334 v~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~-------------~Rqyy~~C~I~GtV- 399 (670)
T PLN02217 334 IVGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHS-------------HRQFYRDCTISGTI- 399 (670)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeeccchhccCC-------------CcEEEEeCEEEEec-
Confidence 4567899999999997643333444443 46889999999999888766554 34588999999543
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC----ceEEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE----SGVRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~----~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-.. ..-.| |.+++. ..-..+.|.|+++....
T Consensus 400 -DFIFG~------a~avfq~C~I~~r~~~~~~~~~I-TAqgr~~~~~~tGfvf~~C~i~~~~ 453 (670)
T PLN02217 400 -DFLFGD------AAAVFQNCTLLVRKPLLNQACPI-TAHGRKDPRESTGFVLQGCTIVGEP 453 (670)
T ss_pred -cEEecC------ceEEEEccEEEEccCCCCCceeE-ecCCCCCCCCCceEEEEeeEEecCc
Confidence 344442 35788999997431 11222 344332 33467999999998753
No 100
>PLN02916 pectinesterase family protein
Probab=77.12 E-value=51 Score=35.05 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=75.0
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+....+.+|.|....|-+-..++ .-.+++|++++.-
T Consensus 273 ~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~QDTLy~~~~-------------Rqyy~~C~I~GtV 339 (502)
T PLN02916 273 GVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQDTLFVHSL-------------RQFYRDCHIYGTI 339 (502)
T ss_pred EEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccCceeEeCCC-------------CEEEEecEEeccc
Confidence 44567899999999997643333344433 467899999999998887776553 3478999999653
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc----eEEEEeecCCC--CceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES----GVRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-.|. -...|+||.+.-... .-.| |.+++. ..-..+.|.|+++....
T Consensus 340 --DFIFG~------a~avFq~C~I~~~~~~~~~~g~I-TAq~r~~~~~~tGfvf~~C~it~~~ 393 (502)
T PLN02916 340 --DFIFGD------AAVVFQNCDIFVRRPMDHQGNMI-TAQGRDDPHENTGISIQHSRVRASP 393 (502)
T ss_pred --ceeccC------ceEEEecCEEEEecCCCCCcceE-EecCCCCCCCCcEEEEEeeEEecCc
Confidence 344442 366889998864321 1122 333322 33467999999998753
No 101
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=76.86 E-value=47 Score=36.18 Aligned_cols=114 Identities=12% Similarity=0.161 Sum_probs=73.9
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|.|.........+-+. .+....+.||.|....|-+-.+++ .-.+++|++.+.-
T Consensus 359 v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~QDTLy~~~~-------------rq~y~~c~I~Gtv- 424 (587)
T PLN02313 359 AVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSN-------------RQFFVKCHITGTV- 424 (587)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecccchhccCCC-------------cEEEEeeEEeecc-
Confidence 4557889999999987643233333332 467889999999988887766543 3388899998653
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+| --...|+||.+.-.. .| ...-|.+++. ..-..+.|.|+++....
T Consensus 425 -DFIFG------~a~avfq~c~i~~r~~~~~~~~~iTAqgr~~~~~~tG~v~~~c~i~~~~ 478 (587)
T PLN02313 425 -DFIFG------NAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTS 478 (587)
T ss_pred -ceecc------ceeEEEEccEEEEecCCCCCcceEEecCCCCCCCCceEEEEecEEecCC
Confidence 23344 246789999997432 11 1223444332 33467999999998754
No 102
>PLN02671 pectinesterase
Probab=76.63 E-value=54 Score=33.32 Aligned_cols=112 Identities=11% Similarity=0.042 Sum_probs=69.4
Q ss_pred eccccEEEEeEEEECCCC----CC--CCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEE
Q 011659 218 VYSSSVIVQGITILAPVT----SP--NTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~----~~--n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~ 291 (480)
...+++..+|++|.|... .. .+-.+.+ ....+.+.||.|....|-+-...+ .-.++||++
T Consensus 151 v~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv-~gDra~f~~c~f~G~QDTLy~~~g-------------R~yf~~CyI 216 (359)
T PLN02671 151 IESDYFCATGITFENTVVAEPGGQGMQAVALRI-SGDKAFFYKVRVLGAQDTLLDETG-------------SHYFYQCYI 216 (359)
T ss_pred EECCceEEEeeEEEcCCCCCCCCCCccEEEEEE-cCccEEEEcceEeccccccEeCCC-------------cEEEEecEE
Confidence 445788888888888631 11 2233444 468899999999988777654432 358899999
Q ss_pred eCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCC--CCceecEEEEeeEeccc
Q 011659 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 292 ~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
.+.- -+-.|. -...|+||++......-..-|.+++ ...-....|.|+++...
T Consensus 217 eG~V--DFIFG~------g~A~Fe~C~I~s~~~~~G~ITA~~r~~~~~~~GfvF~~C~itg~ 270 (359)
T PLN02671 217 QGSV--DFIFGN------AKSLYQDCVIQSTAKRSGAIAAHHRDSPTEDTGFSFVNCVINGT 270 (359)
T ss_pred EEec--cEEecc------eeEEEeccEEEEecCCCeEEEeeccCCCCCCccEEEEccEEccC
Confidence 9543 344442 2568889988654211112233221 12335789999999863
No 103
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=76.35 E-value=63 Score=35.29 Aligned_cols=115 Identities=7% Similarity=0.081 Sum_probs=74.5
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+....+.||.|....|-+.... ..-.++||++.+.-
T Consensus 368 ~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~QDTLy~~~-------------~Rqyy~~C~I~GtV 434 (596)
T PLN02745 368 VALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQDTLYAQT-------------HRQFYRSCVITGTI 434 (596)
T ss_pred EEEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecccccccCC-------------CcEEEEeeEEEeec
Confidence 34668899999999986532222333332 46889999999999888766544 24589999999653
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-... + -..-|.+++. ..-..+.|.|+++....
T Consensus 435 --DFIFG~------a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~Gfvf~~c~i~~~~ 488 (596)
T PLN02745 435 --DFIFGD------AAAIFQNCLIFVRKPLPNQQNTVTAQGRVDKFETTGIVLQNCRIAPDE 488 (596)
T ss_pred --cEEecc------eeEEEEecEEEEecCCCCCCceEEecCCCCCCCCceEEEEeeEEecCc
Confidence 244442 467889999864311 0 0122333322 33467999999998753
No 104
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=75.72 E-value=41 Score=36.16 Aligned_cols=115 Identities=12% Similarity=0.093 Sum_probs=74.9
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|+|.........+-+. .+.++.+.||.|....|-+-..++ .-.++||++.+.
T Consensus 314 ~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~QDTLy~~~~-------------rqyy~~C~I~Gt 380 (537)
T PLN02506 314 VAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHSL-------------RQFYRECEIYGT 380 (537)
T ss_pred EEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeecccccceecCC-------------ceEEEeeEEecc
Confidence 345678999999999997533233333332 478899999999998887765543 358899999964
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCCc---eEEEEeecCCC--CceecEEEEeeEeccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSES---GVRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~~---Gi~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
- -+-+|. -...|+||.+.-... .-..-|.+++. ..-..+.|.|+++...
T Consensus 381 V--DFIFG~------a~avfq~C~i~~r~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~ 434 (537)
T PLN02506 381 I--DFIFGN------GAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFSIQDSYVLAT 434 (537)
T ss_pred c--ceEccC------ceeEEeccEEEEccCCCCCCceEEccCCCCCCCCcEEEEEcCEEccC
Confidence 3 344442 357889999974321 11122333321 2345788999998864
No 105
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=75.65 E-value=57 Score=35.00 Aligned_cols=114 Identities=11% Similarity=0.136 Sum_probs=74.1
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|.|.........+.+. .+....+.+|.|....|-+-..++ .-.+++|++++.
T Consensus 300 ~~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~-------------Rqyy~~C~IeGt 366 (530)
T PLN02933 300 VGVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQDTLYVHSA-------------KQFYRECDIYGT 366 (530)
T ss_pred EEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecccccccCCC-------------ceEEEeeEEecc
Confidence 345567899999999997643333444443 467899999999998887765543 348999999964
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCC----ceEEEEeecCCC--CceecEEEEeeEeccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSE----SGVRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~----~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
- -+-+|. -...|+||.+.-.. ..-.| |.+++. ..-..+.|.|+++...
T Consensus 367 V--DFIFG~------a~avFq~C~i~~~~~~~~~~~~i-TAq~r~~~~~~tGfvf~~C~it~~ 420 (530)
T PLN02933 367 I--DFIFGN------AAVVFQNCSLYARKPNPNHKIAF-TAQSRNQSDQPTGISIISSRILAA 420 (530)
T ss_pred c--ceeccC------ceEEEeccEEEEeccCCCCceEE-EecCCCCCCCCceEEEEeeEEecC
Confidence 3 344442 34678888886432 11122 333322 2345789999999874
No 106
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=74.96 E-value=54 Score=35.38 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=74.5
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+....+.||.|....|-+..+++ .-.++||++.+.-
T Consensus 319 ~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~-------------Rqyy~~C~I~GtV 385 (548)
T PLN02301 319 AAVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQDTLYAHSL-------------RQFYRDSYITGTV 385 (548)
T ss_pred EEECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeeccccceecCC-------------cEEEEeeEEEecc
Confidence 34567899999999987532223334433 467899999999998887766543 3489999999643
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCC--CCceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGR--GGFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~--~g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-... + -..-|.+++ ...-..+.|.|+++....
T Consensus 386 --DFIFG~------a~avfq~c~i~~~~~~~~~~~~iTAqgr~~~~~~tG~vf~~c~i~~~~ 439 (548)
T PLN02301 386 --DFIFGN------AAVVFQNCKIVARKPMAGQKNMVTAQGRTDPNQNTGISIQKCDIIASS 439 (548)
T ss_pred --ceeccc------ceeEEeccEEEEecCCCCCCceEEecCCCCCCCCCEEEEEeeEEecCc
Confidence 344442 367888998864321 1 112233332 233467999999998753
No 107
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=74.83 E-value=43 Score=36.28 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=73.9
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|.|.........+-+. .+....+.+|.|....|-+-..++ .-.+++|++++.-
T Consensus 337 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~-------------Rqyy~~C~I~GtV- 402 (566)
T PLN02713 337 VVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQDTLYTHSL-------------RQFYRECDIYGTV- 402 (566)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCCcceEECCC-------------CEEEEeeEEeccc-
Confidence 4558999999999997543333444433 467899999999998887766543 3589999999643
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEeccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
-+-+|. -...|+||.+.-.. .+ -..-|.+++. ..-..+.|.|+++...
T Consensus 403 -DFIFG~------a~avfq~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~c~i~~~ 455 (566)
T PLN02713 403 -DFIFGN------AAVVFQNCNLYPRLPMQGQFNTITAQGRTDPNQNTGTSIQNCTIKAA 455 (566)
T ss_pred -ceeccc------ceEEEeccEEEEecCCCCCcceeeecCCCCCCCCCEEEEEcCEEecC
Confidence 344442 36788999996431 11 1122333322 3346789999999864
No 108
>PLN02176 putative pectinesterase
Probab=74.50 E-value=79 Score=31.91 Aligned_cols=112 Identities=17% Similarity=0.108 Sum_probs=71.2
Q ss_pred ccccEEEEeEEEECCCCC------CCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEE
Q 011659 219 YSSSVIVQGITILAPVTS------PNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291 (480)
Q Consensus 219 ~~~nv~i~~~~i~~~~~~------~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~ 291 (480)
..+++..+|++|.|.... .....+-+. ......+.||.|....|-+-... ..-.+++|++
T Consensus 120 ~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~QDTLy~~~-------------gRqyf~~CyI 186 (340)
T PLN02176 120 YASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGFQDTLFDGK-------------GRHYYKRCVI 186 (340)
T ss_pred ECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEecccceeEeCC-------------cCEEEEecEE
Confidence 468899999999987421 112233322 46789999999999888776543 3468899999
Q ss_pred eCCCcceEEEcccccCceeEEEEEeeEEeCCC------ceEEEEeecCCC--CceecEEEEeeEeccc
Q 011659 292 ISPFSAVIALGSEMSGGIQDVRAEDITAIDSE------SGVRIKTAVGRG--GFVKDVYVRRMTMKTM 351 (480)
Q Consensus 292 ~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~------~Gi~i~s~~~~~--g~v~nI~~~ni~~~~~ 351 (480)
++.- -+-.|. -...|+||++.-.. ..-..-|.+++. ..-....|.|+++...
T Consensus 187 eG~V--DFIFG~------a~a~Fe~C~I~s~~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~ 246 (340)
T PLN02176 187 SGGI--DFIFGY------AQSIFEGCTLKLTLGIYPPNEPYGTITAQGRPSPSDKGGFVFKDCTVTGV 246 (340)
T ss_pred Eecc--cEEecC------ceEEEeccEEEEecccCCCCCCcEEEEeCCCCCCCCCcEEEEECCEEccC
Confidence 9653 334442 35788999997421 111222333322 2335789999999874
No 109
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=72.90 E-value=83 Score=33.51 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=75.1
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|+|.........+.+. .+....+.+|.|....|-+-..+ ..-.+++|++++.-
T Consensus 281 v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQDTLy~~~-------------~RqyyrdC~I~GtV- 346 (509)
T PLN02488 281 SNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQDALYPHR-------------DRQFYRECFITGTV- 346 (509)
T ss_pred EEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccCcceeeCC-------------CCEEEEeeEEeecc-
Confidence 4467889999999987643233444443 46889999999999888776554 34588999999653
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-... | -..-|.+++. ..-..+.|.|+++....
T Consensus 347 -DFIFG~------a~avFq~C~I~sr~~~~~~~~~ITAq~R~~~~~~tGfvf~~C~it~~~ 400 (509)
T PLN02488 347 -DFICGN------AAAVFQFCQIVARQPMMGQSNVITAQSRESKDDNSGFSIQKCNITASS 400 (509)
T ss_pred -ceEecc------eEEEEEccEEEEecCCCCCCEEEEeCCCCCCCCCcEEEEEeeEEecCC
Confidence 344442 467899999975321 1 1122444332 33457999999998754
No 110
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=71.75 E-value=77 Score=34.57 Aligned_cols=116 Identities=11% Similarity=0.142 Sum_probs=74.6
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|.|.........+-+. .+....+.||.|....|-+...++ .-.+++|++.+.
T Consensus 355 ~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~QDTLy~~~~-------------Rqyy~~C~I~Gt 421 (587)
T PLN02484 355 FAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSN-------------RQFFRECDIYGT 421 (587)
T ss_pred EEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccCcccccCCC-------------cEEEEecEEEec
Confidence 344567899999999987543223334433 467899999999998887765543 348899999854
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
- -+-+|. -...|+||.+.-.. .+ -..-|.+++. ..-..+.|.|+++....
T Consensus 422 V--DFIFG~------a~avfq~C~i~~~~~~~~~~~~ITAq~r~~~~~~~G~vf~~c~i~~~~ 476 (587)
T PLN02484 422 V--DFIFGN------AAVVLQNCSIYARKPMAQQKNTITAQNRKDPNQNTGISIHACRILAAS 476 (587)
T ss_pred c--ceeccc------ceeEEeccEEEEecCCCCCceEEEecCCCCCCCCcEEEEEeeEEecCC
Confidence 3 333442 35688999986431 11 1222333322 34468999999998743
No 111
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=71.49 E-value=98 Score=33.41 Aligned_cols=116 Identities=11% Similarity=0.109 Sum_probs=75.1
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|.|.........+.+. .+....+.+|.|....|-+-..++ .-.++||++.+.
T Consensus 308 ~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQDTLy~~~~-------------rq~y~~c~I~Gt 374 (538)
T PLN03043 308 FAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSL-------------RQFYRECDIYGT 374 (538)
T ss_pred EEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccCcccccCCC-------------cEEEEeeEEeec
Confidence 344568899999999997643333444443 467799999999998887766543 358899999965
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
- -+-+|. -...|+||.+.-.. .+ -..-|.+++. ..-..+.|.|+++....
T Consensus 375 V--DFIFG~------a~avfq~c~i~~r~~~~~~~~~iTA~~r~~~~~~tG~~~~~c~i~~~~ 429 (538)
T PLN03043 375 V--DFIFGN------AAAIFQNCNLYARKPMANQKNAFTAQGRTDPNQNTGISIINCTIEAAP 429 (538)
T ss_pred c--ceEeec------ceeeeeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEecEEecCC
Confidence 3 344442 36789999996531 11 0122333322 23357899999998753
No 112
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=70.94 E-value=92 Score=33.40 Aligned_cols=114 Identities=11% Similarity=0.115 Sum_probs=74.2
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|.|.........+.+. .+....+.||.|....|-+...++ .-.+++|++++.
T Consensus 288 ~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~QDTLy~~~~-------------Rqyy~~C~I~Gt 354 (520)
T PLN02201 288 FAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTM-------------RQFYRECRITGT 354 (520)
T ss_pred EEEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccCCeeEeCCC-------------CEEEEeeEEeec
Confidence 345567899999999997643233334433 467899999999998887776543 347789999964
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCC----ceEEEEeecCC--CCceecEEEEeeEeccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSE----SGVRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~----~Gi~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
- -+-+|. -...|+||.+.-.. ..-.| |.+++ ...-..+.|.|+++...
T Consensus 355 V--DFIFG~------a~avf~~C~i~~~~~~~~~~~~i-TAq~r~~~~~~~Gfvf~~C~it~~ 408 (520)
T PLN02201 355 V--DFIFGD------ATAVFQNCQILAKKGLPNQKNTI-TAQGRKDPNQPTGFSIQFSNISAD 408 (520)
T ss_pred c--cEEecC------ceEEEEccEEEEecCCCCCCceE-EecCCCCCCCCcEEEEEeeEEecC
Confidence 3 344442 35788999887531 11122 33332 13345789999999864
No 113
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=70.93 E-value=59 Score=35.04 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=72.4
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|.|.........+-+. .+....+.+|.|....|-+...++ .-.+++|++.+.-
T Consensus 309 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~QDTLy~~~~-------------Rqyy~~C~I~GtV- 374 (539)
T PLN02995 309 IEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQ-------------RQFYRECYIYGTV- 374 (539)
T ss_pred EECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEecccchhccCCC-------------ceEEEeeEEeecc-
Confidence 4567888999999987533233344433 467899999999988777665442 3488999998543
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||++.-.. .| -..-|.+++. ..-..+.|.|+++....
T Consensus 375 -DFIFG~------a~avf~~C~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~ 428 (539)
T PLN02995 375 -DFIFGN------AAAVFQNCIILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAP 428 (539)
T ss_pred -ceEecc------cceEEeccEEEEecCCCCCcceEecCCCCCCCCCceEEEEeeEEecCC
Confidence 344442 35678888886432 11 1122333322 33467899999998853
No 114
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=70.69 E-value=74 Score=34.56 Aligned_cols=114 Identities=14% Similarity=0.162 Sum_probs=73.7
Q ss_pred eccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 218 VYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
...+++..+|++|.|.........+-+. .+....+.+|.|....|-+...++ .-.+++|++.+.-
T Consensus 344 v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~-------------Rqyy~~C~I~GtV- 409 (572)
T PLN02990 344 INGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQDTLYVHSH-------------RQFFRDCTVSGTV- 409 (572)
T ss_pred EEcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecccchhccCCC-------------cEEEEeeEEeccc-
Confidence 3567899999999987643333344433 467899999999988887665542 3478999999653
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC--CceecEEEEeeEecccc
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG--GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~--g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-.. .| -..-|.+++. ..-..+.|.|+++....
T Consensus 410 -DFIFG~------a~avf~~C~i~~~~~~~~~~~~iTAq~r~~~~~~~G~vf~~C~it~~~ 463 (572)
T PLN02990 410 -DFIFGD------AKVVLQNCNIVVRKPMKGQSCMITAQGRSDVRESTGLVLQNCHITGEP 463 (572)
T ss_pred -ceEccC------ceEEEEccEEEEecCCCCCceEEEeCCCCCCCCCceEEEEeeEEecCc
Confidence 344442 35788999986431 11 1222333332 23457999999998754
No 115
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=70.67 E-value=64 Score=34.99 Aligned_cols=115 Identities=11% Similarity=0.157 Sum_probs=73.0
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+....+.||.|....|-+-.+++ .-.++||++.+.-
T Consensus 341 ~v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~-------------rq~y~~C~I~Gtv 407 (565)
T PLN02468 341 AVFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQDTLYAHAQ-------------RQFYRECNIYGTV 407 (565)
T ss_pred eEECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEeccchhccCCC-------------ceEEEeeEEeccc
Confidence 34567899999999987643223333332 467899999999988776665542 3468999999653
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc--e-EEEEeecCC--CCceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES--G-VRIKTAVGR--GGFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~--G-i~i~s~~~~--~g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-... + -..-|.+++ ...-..+.|.|+++....
T Consensus 408 --DFIFG~------a~avfq~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~ 461 (565)
T PLN02468 408 --DFIFGN------SAVVFQNCNILPRRPMKGQQNTITAQGRTDPNQNTGISIQNCTILPLG 461 (565)
T ss_pred --ceeecc------ceEEEeccEEEEecCCCCCCceEEecCCCCCCCCceEEEEccEEecCC
Confidence 344442 367889998864311 0 112233332 234467899999998753
No 116
>PLN02197 pectinesterase
Probab=68.78 E-value=1.1e+02 Score=33.33 Aligned_cols=116 Identities=13% Similarity=0.143 Sum_probs=75.1
Q ss_pred EEeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCC
Q 011659 216 HPVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP 294 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~ 294 (480)
.....+++..+|++|.|.........+-+. .+....+.+|.|....|-+...++ .-.+++|++++.
T Consensus 359 ~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQDTLy~~~~-------------Rqyy~~C~I~Gt 425 (588)
T PLN02197 359 VQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNG-------------RQFYRNIVVSGT 425 (588)
T ss_pred EEEECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecCcceEecCC-------------CEEEEeeEEEec
Confidence 334578899999999997532233344433 468899999999998887776553 348899999954
Q ss_pred CcceEEEcccccCceeEEEEEeeEEeCCC--ce-EEEEeecCCC---CceecEEEEeeEecccc
Q 011659 295 FSAVIALGSEMSGGIQDVRAEDITAIDSE--SG-VRIKTAVGRG---GFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 295 ~~~gi~igs~~~~~v~nI~v~n~~~~~~~--~G-i~i~s~~~~~---g~v~nI~~~ni~~~~~~ 352 (480)
- -+-+|. -...|+||.+.-.. .| -..-|.+++. ..-..+.|.|+++....
T Consensus 426 V--DFIFG~------a~avfq~C~i~~r~~~~~~~~~iTAqgr~~~~~~~tG~vf~~C~it~~~ 481 (588)
T PLN02197 426 V--DFIFGK------SATVIQNSLIVVRKGSKGQYNTVTADGNEKGLAMKIGIVLQNCRIVPDK 481 (588)
T ss_pred c--cccccc------eeeeeecCEEEEecCCCCCceeEECCCCCCCCCCCcEEEEEccEEecCC
Confidence 3 233332 24788999886321 11 1222444432 23457999999998743
No 117
>PLN02314 pectinesterase
Probab=68.41 E-value=71 Score=34.85 Aligned_cols=115 Identities=10% Similarity=0.144 Sum_probs=73.5
Q ss_pred EeccccEEEEeEEEECCCCCCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 217 PVYSSSVIVQGITILAPVTSPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 217 ~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
....+++..+|++|.|.........+-+. .+....+.||.|....|-+...++ .-.++||++.+.-
T Consensus 361 ~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~QDTLy~~~~-------------rq~y~~C~I~Gtv 427 (586)
T PLN02314 361 AAAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSN-------------RQFYRDCDITGTI 427 (586)
T ss_pred EEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEeccchheeCCC-------------CEEEEeeEEEecc
Confidence 34567889999999987533233333332 467788999999988887765543 3488899998543
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCC--c-eEEEEeecCC--CCceecEEEEeeEecccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSE--S-GVRIKTAVGR--GGFVKDVYVRRMTMKTMK 352 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~--~-Gi~i~s~~~~--~g~v~nI~~~ni~~~~~~ 352 (480)
-+-+|. -...|+||.+.-.. . .-..-|.+++ ...-..+.|.|+++....
T Consensus 428 --DFIFG~------a~avf~~c~i~~~~~~~~~~~~iTA~~r~~~~~~~G~vf~~c~i~~~~ 481 (586)
T PLN02314 428 --DFIFGN------AAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQRCTISAFG 481 (586)
T ss_pred --ceeccC------ceeeeeccEEEEecCCCCCCceEecCCCCCCCCCCEEEEEeeEEecCC
Confidence 344442 35688999886431 1 1122244433 234467899999998854
No 118
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=67.96 E-value=5.6 Score=32.17 Aligned_cols=17 Identities=18% Similarity=0.358 Sum_probs=9.1
Q ss_pred hhhHHHHHHHHHHHHHH
Q 011659 6 TAKRTQVICIILLVGII 22 (480)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (480)
|.+|.++|+.|+|++||
T Consensus 1 MaSK~~llL~l~LA~lL 17 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALL 17 (95)
T ss_pred CchhHHHHHHHHHHHHH
Confidence 34565666666554433
No 119
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=67.85 E-value=1.1e+02 Score=31.70 Aligned_cols=127 Identities=12% Similarity=0.048 Sum_probs=73.4
Q ss_pred EEEeccccEEEEeEEEECCCCC----CCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEE
Q 011659 215 VHPVYSSSVIVQGITILAPVTS----PNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289 (480)
Q Consensus 215 i~~~~~~nv~i~~~~i~~~~~~----~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~ 289 (480)
......+++..+|++|.|.... .+...+-+. ....+.+.+|.|....|-+-......+.+.. ..-...-.++||
T Consensus 200 Tv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~QDTLy~~~~~~~~~~~-~~~~gRqYf~~C 278 (422)
T PRK10531 200 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQDTFFVTNSGVQNRLE-TDRQPRTYVKNS 278 (422)
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEecccceeeecccccccccc-ccccccEEEEeC
Confidence 3445778999999999997521 112223322 4678999999999877877653210000000 001235789999
Q ss_pred EEeCCCcceEEEcccccCceeEEEEEeeEEeCCCc----eEEEEeecC-CCCceecEEEEeeEeccc
Q 011659 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES----GVRIKTAVG-RGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 290 ~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~-~~g~v~nI~~~ni~~~~~ 351 (480)
++++.- -+-.|. -...|+||++.-... .-.| +.+. ....-..+.|.|+++...
T Consensus 279 yIeG~V--DFIFG~------g~AvFenC~I~s~~~~~~~~g~I-TA~~t~~~~~~GfvF~nCrit~~ 336 (422)
T PRK10531 279 YIEGDV--DFVFGR------GAVVFDNTEFRVVNSRTQQEAYV-FAPATLPNIYYGFLAINSRFNAS 336 (422)
T ss_pred EEeecc--cEEccC------ceEEEEcCEEEEecCCCCCceEE-EecCCCCCCCCEEEEECCEEecC
Confidence 999543 344442 256788888865321 1122 1111 112335688999999874
No 120
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=65.41 E-value=46 Score=32.94 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=61.8
Q ss_pred eccccEEEEeEEEECCCCC--CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 218 VYSSSVIVQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~--~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
...+++.++|++|.|.... ..+-.+.+ .+.++.+.||.|....|-+-... ....++||++.+.-
T Consensus 84 v~a~~f~~~nit~~Nt~g~~~~qAvAl~~-~~d~~~f~~c~~~g~QDTL~~~~-------------~r~y~~~c~IeG~v 149 (298)
T PF01095_consen 84 VNADDFTAENITFENTAGPSGGQAVALRV-SGDRAAFYNCRFLGYQDTLYANG-------------GRQYFKNCYIEGNV 149 (298)
T ss_dssp E-STT-EEEEEEEEEHCSGSG----SEEE-T-TSEEEEEEEEE-STT-EEE-S-------------SEEEEES-EEEESE
T ss_pred ccccceeeeeeEEecCCCCcccceeeeee-cCCcEEEEEeEEccccceeeecc-------------ceeEEEeeEEEecC
Confidence 3467899999999986422 22334444 45789999999999888776554 35688999999542
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCC----ceEEEEeecCC--CCceecEEEEeeEeccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSE----SGVRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~----~Gi~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
-+-.|. -...|+||++.-.. .+..| +.+++ ...-...+|.|+++...
T Consensus 150 --DFIfG~------~~a~f~~c~i~~~~~~~~~~~~I-tA~~r~~~~~~~G~vF~~c~i~~~ 202 (298)
T PF01095_consen 150 --DFIFGN------GTAVFENCTIHSRRPGGGQGGYI-TAQGRTSPSQKSGFVFDNCTITGD 202 (298)
T ss_dssp --EEEEES------SEEEEES-EEEE--SSTSSTEEE-EEE---CTTSS-EEEEES-EEEES
T ss_pred --cEEECC------eeEEeeeeEEEEeccccccceeE-EeCCccccCCCeEEEEEEeEEecC
Confidence 344453 25578889887432 11223 22221 23346788999998864
No 121
>PLN02497 probable pectinesterase
Probab=63.86 E-value=1.4e+02 Score=30.01 Aligned_cols=113 Identities=14% Similarity=0.113 Sum_probs=70.4
Q ss_pred eccccEEEEeEEEECCCCCC-------CCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEE
Q 011659 218 VYSSSVIVQGITILAPVTSP-------NTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~~-------n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~ 289 (480)
...+++..+|++|.|....+ ....+-+. ......+.||.|....|-+-... ..-.++||
T Consensus 112 v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~QDTLy~~~-------------gRqyf~~C 178 (331)
T PLN02497 112 TLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQDTLWDSD-------------GRHYFKRC 178 (331)
T ss_pred EecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccccceeeCC-------------CcEEEEeC
Confidence 45678999999999875311 11222222 46789999999999888765443 24588999
Q ss_pred EEeCCCcceEEEcccccCceeEEEEEeeEEeCCCc----e-EEEEeecCC--CCceecEEEEeeEeccc
Q 011659 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES----G-VRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 290 ~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~----G-i~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
++.+.- -+-.|. -...|+||++..... + -..-|.+++ ...-....|.|+++...
T Consensus 179 ~IeG~V--DFIFG~------g~a~Fe~C~I~s~~~~~~~~~~g~ITA~~r~~~~~~~GfvF~~C~itg~ 239 (331)
T PLN02497 179 TIQGAV--DFIFGS------GQSIYESCVIQVLGGQLEPGLAGFITAQGRTNPYDANGFVFKNCLVYGT 239 (331)
T ss_pred EEEecc--cEEccC------ceEEEEccEEEEecCcCCCCCceEEEecCCCCCCCCceEEEEccEEccC
Confidence 998543 344442 356888998874311 0 112222322 13345788999999874
No 122
>KOG1777 consensus Putative Zn-finger protein [General function prediction only]
Probab=63.85 E-value=1.6e+02 Score=30.52 Aligned_cols=39 Identities=18% Similarity=0.287 Sum_probs=26.4
Q ss_pred HHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEE
Q 011659 72 FKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFL 112 (480)
Q Consensus 72 iq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~ 112 (480)
|.+|+..+.+. .-+..+++-+|+|....+.+.|.+.+..
T Consensus 35 iEea~~~l~e~--~~e~LIFlH~G~~e~~~i~I~sdvqiiG 73 (625)
T KOG1777|consen 35 IEEALRFLDEN--DEEKLIFLHEGTHETETIRITSDVQIIG 73 (625)
T ss_pred HHHHhhhcccc--cccceEEEEeccccceEEEEcCCeeEec
Confidence 44555444331 2356788889999877888888888754
No 123
>PLN02304 probable pectinesterase
Probab=63.75 E-value=1.8e+02 Score=29.85 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=13.0
Q ss_pred EEEeeecEEEEeEEEEeCC
Q 011659 193 EIMYSQNIQISNLTLINSP 211 (480)
Q Consensus 193 ~~~~~~nv~I~~v~i~ns~ 211 (480)
.....+++..+|++|+|+.
T Consensus 157 v~v~a~~F~a~nITf~Nta 175 (379)
T PLN02304 157 VQVFASNFIAKNISFMNVA 175 (379)
T ss_pred EEEECCCeEEEeeEEEecC
Confidence 3345677888888888763
No 124
>PRK13621 psbV cytochrome c-550; Provisional
Probab=60.21 E-value=14 Score=33.17 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=29.6
Q ss_pred ccCCCccccccc-ccCceeEEEeecCcCCCCcchhHHHH---HHHHHH-hhhcccCCCcEEEeCCCe
Q 011659 35 ARNSDWFEYSAI-SCRAHSASLEEFGGVGDGTTSNTKAF---KAAIDH-LSRFQSEGGSQLFVPPGK 96 (480)
Q Consensus 35 ~~~~~~~~~~~~-~~~~~~~nV~dfGA~gDg~tddT~Ai---q~Ai~~-~~~~~~~~g~~v~iP~G~ 96 (480)
+..+++|+.+-+ +..+.++... +.|+-++-..+.+ ++.+++ |+.|+ .+|+++..|.-+
T Consensus 31 a~~~d~yv~~~l~~~~~~~v~~~---~~g~~~~~s~~d~~~G~~lF~~~Ca~CH-~gG~n~v~p~kt 93 (170)
T PRK13621 31 AARVDPYVKRYLKVTEPVELPLD---AAGETQTFSPEQLTDGKQLFDSNCLNCH-VGGATLPNPNVS 93 (170)
T ss_pred hhcccHHHHHHcccCCceEeeeC---CCCCeEEeCHHHHHhHHHHHHHHHHHhc-cCCCCCcCCCCC
Confidence 345677777776 3334444333 3333333333222 344433 66666 577777666544
No 125
>PF09251 PhageP22-tail: Salmonella phage P22 tail-spike; InterPro: IPR015331 This entry is represented by the Bacteriophage P22, Gp9, tailspike protein (TSP). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The TSP C-terminal domain adopts a structure that consists of a single-stranded right-handed beta-helix, which in turn is made of parallel beta-strands and short turns. They are required for recognition of the 0-antigenic repeating units of the cell surface, and for subsequent infection of the bacterial cell by the phage []. ; PDB: 1QA3_A 1QRB_A 2XC1_C 1QA2_A 1TYX_A 2VFQ_A 2VFO_A 1TYU_A 2VFN_A 1QA1_A ....
Probab=58.19 E-value=2.3e+02 Score=29.32 Aligned_cols=90 Identities=12% Similarity=0.129 Sum_probs=42.4
Q ss_pred CccEEEEecEE-eeCCceeeecCCCC--ccCcc----------cCCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEE
Q 011659 247 CTNTRIEDCYI-VSGDDCVAVKSGWD--QYGIA----------YGMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDV 312 (480)
Q Consensus 247 s~nV~I~n~~i-~~gdD~iai~sg~~--~~g~~----------~~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI 312 (480)
|-|+.++|+.. ..-.|++.+.+..+ ..-.+ ...-..|-.|+|...++.. |+.++..+ .+.++||
T Consensus 263 nYnLqF~d~~~i~~~~DG~Dl~aDtg~~~~~dR~~D~~laqYp~~qLPtnHiidNi~~~~~l--GVG~~~DG~~~yvsni 340 (549)
T PF09251_consen 263 NYNLQFRDSVTISPVWDGFDLGADTGMGPETDRPGDYPLAQYPWHQLPTNHIIDNILVRGSL--GVGIGMDGKGGYVSNI 340 (549)
T ss_dssp EBS-EEEEEEEES-SSESEEE-SS-SSSTTS--TTS--TTTS-TT------EEEEEEEES-S--SESCEEECCS-EEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc--eeeeeecCCCceEeeE
Confidence 45666766663 44566777666422 11000 1112356788999988654 55555443 2346666
Q ss_pred EEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecc
Q 011659 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT 350 (480)
Q Consensus 313 ~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~ 350 (480)
++++|. ..|+.+++.. -.|.||++-+
T Consensus 341 ~~~d~~----g~G~~~~~~~--------~~ftNitvId 366 (549)
T PF09251_consen 341 TVQDCA----GAGIFIRGTN--------KVFTNITVID 366 (549)
T ss_dssp EEES-S----SESEEEECCS---------EEEEEEEES
T ss_pred Eeeccc----CCceEEeecC--------CceeeeEEEe
Confidence 666652 3677776542 3455555544
No 126
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=49.65 E-value=19 Score=20.26 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=9.9
Q ss_pred EEEEEeeEEeCCCc-eEEEE
Q 011659 311 DVRAEDITAIDSES-GVRIK 329 (480)
Q Consensus 311 nI~v~n~~~~~~~~-Gi~i~ 329 (480)
+++|++|++.+... |+.+.
T Consensus 3 ~~~i~~n~i~~~~~~Gi~i~ 22 (26)
T smart00710 3 NVTIENNTIRNNGGDGIYIG 22 (26)
T ss_pred CEEEECCEEEeCCCCcEEEe
Confidence 45555555555543 55543
No 127
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=43.19 E-value=1.3e+02 Score=25.04 Aligned_cols=13 Identities=15% Similarity=0.455 Sum_probs=7.6
Q ss_pred eecEEEEeEEEEe
Q 011659 197 SQNIQISNLTLIN 209 (480)
Q Consensus 197 ~~nv~I~~v~i~n 209 (480)
..+++++++++.+
T Consensus 44 ~~~~~~~G~~~~~ 56 (146)
T smart00722 44 SNDVRVDGITIGG 56 (146)
T ss_pred CCCCEEECeEEEe
Confidence 3445666666665
No 128
>PRK13617 psbV cytochrome c-550; Provisional
Probab=34.52 E-value=1e+02 Score=27.74 Aligned_cols=18 Identities=39% Similarity=0.455 Sum_probs=9.8
Q ss_pred CCchh-hhhHHHHHHHHHH
Q 011659 1 MGSLK-TAKRTQVICIILL 18 (480)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~~ 18 (480)
|-++. |.||.+.++++++
T Consensus 1 m~s~m~MLkr~~~~~~~~l 19 (170)
T PRK13617 1 MASLFSSLRRSLKRLLILL 19 (170)
T ss_pred CchHHHHHHHHHHHHHHHH
Confidence 44544 7777665554433
No 129
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=28.17 E-value=1.5e+02 Score=24.76 Aligned_cols=67 Identities=15% Similarity=0.093 Sum_probs=38.3
Q ss_pred EeeecEEEEeEEEEeCC---CceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEe-cEEeeCCcee
Q 011659 195 MYSQNIQISNLTLINSP---SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED-CYIVSGDDCV 264 (480)
Q Consensus 195 ~~~~nv~I~~v~i~ns~---~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n-~~i~~gdD~i 264 (480)
..+.+..|.+-.+.+.. .+++.+..+.+..+.+-++. .. .. .+|+++....+..+.+ ..+....|++
T Consensus 73 ~~~~~~~i~~N~~~~~~~~~~~Gi~~~~~~~~~~~~N~i~-~~-~~-g~G~~~~~~~~~~~~~~~~~~~~~~Gi 143 (146)
T smart00722 73 QNTGKNLIIDNVTINGTEGSGAGIVVTAGSEGLFIGNRII-TN-ND-GDGNYLSDSSGGDLIGNRIYDNGRDGI 143 (146)
T ss_pred cCccccEEEcceecCCCccceEEEEEECCccceEecCeEE-ee-cC-CCCEEEeCCCCcEEEcceeEecCCCcE
Confidence 55566666666666653 67777776666555555554 11 11 6777777666666666 3333334443
No 130
>PF11429 Colicin_D: Colicin D; InterPro: IPR024440 Colicin D is a bacteriocin that kills target cells by cleaving tRNA(Arg). This entry represents a domain found in the C terminus of colicin D, which is responsible for its catalytic activity []. The domain is also found in some S-type pyocins, which are also bacteriocins.; GO: 0004540 ribonuclease activity; PDB: 1TFO_A 1V74_A 1TFK_A.
Probab=27.28 E-value=1.2e+02 Score=24.36 Aligned_cols=38 Identities=18% Similarity=0.349 Sum_probs=20.0
Q ss_pred eecCcCC-CCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeee
Q 011659 56 EEFGGVG-DGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT 99 (480)
Q Consensus 56 ~dfGA~g-Dg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~ 99 (480)
.|||..+ +.-...-..|++||..--. ...+| ..|||+-
T Consensus 10 ~DFGi~~~~~N~~t~~~F~~aI~~hi~----~~~tv--~~GtYr~ 48 (92)
T PF11429_consen 10 GDFGITGTNWNKETLEEFEDAIKEHIK----NPDTV--EKGTYRR 48 (92)
T ss_dssp GGGT------SHHHHHHHHHHHHHHHH-----TT-E--E--BETT
T ss_pred cccCcccCCCChhhHHHHHHHHHHHhC----CCCeE--eccceec
Confidence 4799988 5555556889999987543 34564 4999973
No 131
>PRK09752 adhesin; Provisional
Probab=27.00 E-value=1.1e+03 Score=28.03 Aligned_cols=39 Identities=10% Similarity=0.185 Sum_probs=19.7
Q ss_pred ccEEEEeEEEECCCCCCCCCeEecCCCc-----cEEEEecEEee
Q 011659 221 SSVIVQGITILAPVTSPNTDGINPDSCT-----NTRIEDCYIVS 259 (480)
Q Consensus 221 ~nv~i~~~~i~~~~~~~n~DGI~~~~s~-----nV~I~n~~i~~ 259 (480)
..++|.++.|.+.....+.=.|...+.. .+.|.|+.|.+
T Consensus 121 ~~itI~ns~F~nN~A~g~GGAIYa~G~n~~g~v~l~I~NS~F~n 164 (1250)
T PRK09752 121 STLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRN 164 (1250)
T ss_pred ceeEEeeeEEEccccCCCCCEEEEcccCCCcceEEEEEecEEEc
Confidence 3456666666664322233335443321 25667776654
No 132
>PHA00672 hypothetical protein
Probab=25.08 E-value=78 Score=26.82 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=19.2
Q ss_pred cEEEeCCCeeeeeeecccccceEEEeeCcE
Q 011659 88 SQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 117 (480)
Q Consensus 88 ~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~ 117 (480)
-++.||+|+-++|.+.--+++ |.+....+
T Consensus 50 Rei~IPkGt~LtG~~hkf~~~-ii~sG~it 78 (152)
T PHA00672 50 RTIRIPAGVALTGALIKVSTV-LIFSGHAT 78 (152)
T ss_pred EEEeccCceeeeeeeeEeeEE-EEecccEE
Confidence 357899999888876666666 44443333
No 133
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins.
Probab=22.21 E-value=88 Score=28.94 Aligned_cols=27 Identities=30% Similarity=0.714 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHhhhcccCCCcEEEeCCCee
Q 011659 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKW 97 (480)
Q Consensus 67 ddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y 97 (480)
.+.+++++|.+.+. +|+..++||+|+-
T Consensus 83 ~~~~~~~~~~~~L~----~G~~l~IFPEGtr 109 (210)
T cd07986 83 KNRESLREALRHLK----NGGALIIFPAGRV 109 (210)
T ss_pred hhHHHHHHHHHHHh----CCCEEEEECCccc
Confidence 56678888888886 5778899999984
No 134
>COG4704 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.16 E-value=2.5e+02 Score=24.27 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=20.0
Q ss_pred chhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee
Q 011659 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF 102 (480)
Q Consensus 66 tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l 102 (480)
.+|+..||+|--.+... +..-...-++||+|-+..+
T Consensus 59 ~~~~~~f~ractsit~d-pv~~~f~~Lk~G~YAvaa~ 94 (151)
T COG4704 59 MSDPSRFQRACTSITGD-PVSKSFYGLKPGKYAVAAF 94 (151)
T ss_pred CCCchHHhhhcccccCC-chhheeecCCCccEEEEEE
Confidence 45777888874433210 0111223389999977543
Done!