Query 011659
Match_columns 480
No_of_seqs 307 out of 2212
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:42:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011659.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011659hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.3E-69 7.8E-74 557.4 33.5 352 48-417 23-413 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 1.2E-61 4E-66 493.2 40.4 348 51-432 13-374 (376)
3 2uvf_A Exopolygalacturonase; G 100.0 1.3E-60 4.5E-65 511.4 39.9 358 46-417 150-564 (608)
4 1rmg_A Rgase A, rhamnogalactur 100.0 8.6E-60 2.9E-64 484.4 37.5 337 43-432 11-355 (422)
5 1czf_A Polygalacturonase II; b 100.0 3.8E-55 1.3E-59 440.9 31.5 319 50-431 27-357 (362)
6 2iq7_A Endopolygalacturonase; 100.0 4E-54 1.4E-58 431.1 32.4 316 67-432 6-333 (339)
7 1nhc_A Polygalacturonase I; be 100.0 9.7E-54 3.3E-58 427.8 32.1 316 66-432 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1.6E-53 5.3E-58 427.8 33.6 317 68-432 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 3E-53 1E-57 424.4 33.9 313 68-432 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 2.7E-53 9.2E-58 423.1 24.7 307 69-431 8-328 (335)
11 2x6w_A Tail spike protein; vir 100.0 8.1E-50 2.8E-54 413.6 20.9 301 49-417 48-384 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 5.8E-43 2E-47 368.4 19.0 309 53-417 143-521 (549)
13 1ogo_X Dextranase; hydrolase, 100.0 2.2E-40 7.5E-45 348.3 26.7 269 85-417 229-546 (574)
14 3gq8_A Preneck appendage prote 100.0 7.6E-40 2.6E-44 340.9 27.4 303 49-418 19-372 (609)
15 1h80_A IOTA-carrageenase; hydr 100.0 1E-39 3.6E-44 335.9 28.0 301 46-416 15-360 (464)
16 3gqn_A Preneck appendage prote 100.0 1.6E-39 5.4E-44 343.1 26.1 303 49-418 19-372 (772)
17 2vbk_A Tailspike-protein; vira 100.0 3.8E-35 1.3E-39 288.6 13.5 229 49-323 48-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 7.9E-31 2.7E-35 267.2 26.2 183 52-266 2-200 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 2E-23 6.9E-28 220.8 22.6 247 48-358 45-304 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.9 3E-22 1E-26 206.3 22.1 227 148-417 190-444 (448)
21 1czf_A Polygalacturonase II; b 99.9 3.2E-21 1.1E-25 193.8 25.0 211 191-428 89-330 (362)
22 1ia5_A Polygalacturonase; glyc 99.9 7.6E-21 2.6E-25 189.8 26.3 203 191-427 66-306 (339)
23 2iq7_A Endopolygalacturonase; 99.9 1.3E-20 4.6E-25 188.1 26.3 203 191-427 62-304 (339)
24 1nhc_A Polygalacturonase I; be 99.9 3E-20 1E-24 185.3 25.7 202 191-427 62-303 (336)
25 1rmg_A Rgase A, rhamnogalactur 99.9 3.2E-20 1.1E-24 190.4 25.3 173 214-417 129-310 (422)
26 1k5c_A Endopolygalacturonase; 99.9 1.5E-20 5.1E-25 187.0 21.5 209 191-427 60-300 (335)
27 1hg8_A Endopolygalacturonase; 99.9 1.3E-19 4.4E-24 181.5 26.6 215 191-428 63-317 (349)
28 1bhe_A PEHA, polygalacturonase 99.9 1.8E-19 6.1E-24 182.8 26.5 198 189-417 100-338 (376)
29 2uvf_A Exopolygalacturonase; G 99.8 9.5E-20 3.2E-24 195.1 25.7 250 148-441 331-608 (608)
30 1ogo_X Dextranase; hydrolase, 99.7 2.1E-15 7.3E-20 158.6 23.2 252 85-390 262-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 6.7E-16 2.3E-20 162.6 19.1 199 192-417 238-482 (549)
32 2inu_A Insulin fructotransfera 99.6 9.7E-14 3.3E-18 137.7 19.0 246 49-329 11-282 (410)
33 1h80_A IOTA-carrageenase; hydr 99.6 4.3E-14 1.5E-18 145.4 16.2 160 195-398 106-279 (464)
34 3gq8_A Preneck appendage prote 99.4 2.6E-11 8.9E-16 126.8 23.7 182 192-417 100-309 (609)
35 3gqn_A Preneck appendage prote 99.4 3.2E-11 1.1E-15 128.1 22.2 182 192-417 100-309 (772)
36 2x6w_A Tail spike protein; vir 99.3 1.8E-12 6.1E-17 134.9 9.6 180 190-417 142-343 (600)
37 2pyg_A Poly(beta-D-mannuronate 99.3 7.2E-11 2.5E-15 119.6 18.9 218 155-417 132-360 (377)
38 3eqn_A Glucan 1,3-beta-glucosi 99.3 2.9E-11 1E-15 128.4 13.2 70 48-122 396-466 (758)
39 1ru4_A Pectate lyase, PEL9A; p 99.2 1.4E-09 4.9E-14 110.2 20.7 248 49-358 13-299 (400)
40 1dbg_A Chondroitinase B; beta 99.1 9.8E-09 3.4E-13 106.6 21.8 209 68-330 30-272 (506)
41 1pcl_A Pectate lyase E; lyase 98.6 1E-06 3.5E-11 87.5 18.0 86 237-323 131-228 (355)
42 1idk_A Pectin lyase A; signal, 98.6 6.2E-07 2.1E-11 89.2 16.2 70 238-322 152-233 (359)
43 1qcx_A Pectin lyase B; beta-he 98.6 1.9E-06 6.4E-11 85.8 17.6 69 192-292 126-197 (359)
44 2qy1_A Pectate lyase II; GAG l 98.5 1.2E-06 4.2E-11 86.3 14.4 73 238-322 112-204 (330)
45 1pxz_A Major pollen allergen J 98.5 1.4E-06 4.8E-11 86.3 14.7 112 192-322 108-226 (346)
46 3zsc_A Pectate trisaccharide-l 98.5 7.4E-06 2.5E-10 80.5 18.7 74 238-323 115-195 (340)
47 1pxz_A Major pollen allergen J 98.4 3.3E-06 1.1E-10 83.7 14.9 132 197-351 87-226 (346)
48 2x3h_A K5 lyase, K5A lyase; ba 98.4 3.7E-05 1.3E-09 72.3 20.4 176 50-269 62-247 (542)
49 1gq8_A Pectinesterase; hydrola 98.4 2.2E-05 7.5E-10 76.8 19.5 135 196-351 92-243 (319)
50 1xg2_A Pectinesterase 1; prote 98.4 1.9E-05 6.4E-10 77.3 18.2 135 196-351 88-239 (317)
51 3uw0_A Pectinesterase; right-h 98.3 1E-05 3.5E-10 80.5 14.9 108 196-322 120-255 (364)
52 3vmv_A Pectate lyase; polysacc 98.2 1.4E-05 4.8E-10 78.2 13.3 74 237-322 118-204 (326)
53 1air_A Pectate lyase C, PELC; 98.2 1.3E-05 4.4E-10 79.5 12.9 109 213-322 103-215 (353)
54 1pe9_A Pectate lyase A; parall 98.2 1.8E-05 6.1E-10 78.6 13.6 73 238-322 142-238 (361)
55 3zsc_A Pectate trisaccharide-l 98.1 2.6E-05 8.8E-10 76.7 13.0 141 157-321 62-215 (340)
56 1air_A Pectate lyase C, PELC; 98.0 2.9E-05 9.8E-10 77.0 11.9 146 191-356 104-265 (353)
57 2inu_A Insulin fructotransfera 98.0 4E-05 1.4E-09 76.2 12.4 130 198-356 136-280 (410)
58 1vbl_A Pectate lyase 47; PL 47 98.0 2E-05 6.9E-10 79.7 10.3 97 214-322 149-282 (416)
59 2nsp_A Pectinesterase A; micha 97.9 0.0006 2E-08 67.3 18.7 107 196-322 94-230 (342)
60 2o04_A Pectate lyase, PL; hexa 97.9 3.9E-05 1.3E-09 77.2 9.9 96 214-322 144-276 (399)
61 1ru4_A Pectate lyase, PEL9A; p 97.9 0.00018 6E-09 72.8 14.4 142 192-357 110-275 (400)
62 1vbl_A Pectate lyase 47; PL 47 97.7 0.00025 8.6E-09 71.7 13.0 123 191-322 149-304 (416)
63 1idk_A Pectin lyase A; signal, 97.7 0.00073 2.5E-08 67.1 16.1 171 158-356 103-284 (359)
64 3vmv_A Pectate lyase; polysacc 97.7 0.00098 3.4E-08 65.1 15.7 143 156-328 78-233 (326)
65 1qcx_A Pectin lyase B; beta-he 97.7 0.00088 3E-08 66.5 15.4 47 260-322 152-199 (359)
66 2o04_A Pectate lyase, PL; hexa 97.6 0.00027 9.2E-09 71.1 11.4 123 191-323 144-299 (399)
67 1pcl_A Pectate lyase E; lyase 97.6 0.00093 3.2E-08 66.2 14.6 124 191-322 97-249 (355)
68 2qy1_A Pectate lyase II; GAG l 97.4 0.00049 1.7E-08 67.7 10.3 166 155-356 70-254 (330)
69 2vbk_A Tailspike-protein; vira 97.3 0.00018 6.1E-09 71.7 4.5 128 192-353 140-287 (514)
70 3grh_A YBHC, acyl-COA thioeste 97.0 0.11 3.6E-06 52.2 22.1 140 192-351 195-362 (422)
71 1pe9_A Pectate lyase A; parall 96.7 0.0056 1.9E-07 60.7 9.3 123 191-321 104-259 (361)
72 1dbg_A Chondroitinase B; beta 96.1 0.043 1.5E-06 56.8 12.3 138 196-351 226-391 (506)
73 3t9g_A Pectate lyase; PL3, par 95.7 0.3 1E-05 43.1 14.1 108 222-355 53-161 (196)
74 3t9g_A Pectate lyase; PL3, par 94.9 0.81 2.8E-05 40.3 14.3 132 197-353 51-183 (196)
75 1ee6_A Pectate lyase; parallel 94.3 0.51 1.8E-05 41.7 11.7 28 238-267 61-89 (197)
76 1gq8_A Pectinesterase; hydrola 94.2 0.49 1.7E-05 45.9 12.6 111 218-351 91-209 (319)
77 1xg2_A Pectinesterase 1; prote 93.8 0.63 2.2E-05 45.1 12.5 111 218-351 87-205 (317)
78 3b4n_A Endo-pectate lyase; pec 93.1 1.2 4.1E-05 42.8 12.7 16 158-175 124-139 (344)
79 1ee6_A Pectate lyase; parallel 92.0 1 3.5E-05 39.8 9.9 79 197-292 47-125 (197)
80 3riq_A Tailspike protein; righ 91.9 9.7 0.00033 37.4 17.3 67 281-349 262-345 (543)
81 2nsp_A Pectinesterase A; micha 88.0 4.7 0.00016 39.4 12.1 111 218-351 93-230 (342)
82 3uw0_A Pectinesterase; right-h 87.6 6.6 0.00023 38.6 12.9 113 218-351 119-255 (364)
83 3ju4_A Endo-N-acetylneuraminid 85.3 0.29 1E-05 48.3 1.7 22 58-79 4-25 (670)
84 2vfm_A Bifunctional tail prote 74.1 28 0.00097 33.5 11.2 65 281-347 269-352 (559)
85 3b4n_A Endo-pectate lyase; pec 72.0 28 0.00097 33.3 10.7 42 222-268 159-201 (344)
86 2v5i_A Salmonella typhimurium 70.9 27 0.00092 33.7 10.2 65 281-347 272-355 (559)
87 3grh_A YBHC, acyl-COA thioeste 68.6 38 0.0013 33.8 11.3 125 216-350 196-330 (422)
88 2vfm_A Bifunctional tail prote 66.4 50 0.0017 31.9 11.0 57 281-351 316-373 (559)
89 2v5i_A Salmonella typhimurium 65.9 50 0.0017 31.9 10.9 91 247-351 272-376 (559)
90 3riq_A Tailspike protein; righ 59.8 1.1E+02 0.0038 30.1 12.2 90 246-344 261-362 (543)
91 2xc1_A Bifunctional tail prote 59.4 38 0.0013 34.0 9.1 65 281-347 376-459 (666)
92 2xc1_A Bifunctional tail prote 58.7 74 0.0025 32.0 11.0 114 220-351 344-480 (666)
93 2x3h_A K5 lyase, K5A lyase; ba 52.8 61 0.0021 30.6 8.9 131 281-432 103-258 (542)
94 3n6z_A Putative immunoglobulin 25.8 1.2E+02 0.004 29.7 6.5 40 282-322 197-242 (363)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.3e-69 Score=557.35 Aligned_cols=352 Identities=33% Similarity=0.603 Sum_probs=313.9
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCC
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~ 127 (480)
.++.++||+||||+|||.+|||+|||+||++|++ .+|++|+||+|+|++++|.|+|+++|+++ |+|++++++++|
T Consensus 23 ~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~---~ggg~v~vP~G~yl~~~l~l~s~v~l~l~--gtL~~s~d~~~y 97 (448)
T 3jur_A 23 IPDREVNLLDFGARGDGRTDCSESFKRAIEELSK---QGGGRLIVPEGVFLTGPIHLKSNIELHVK--GTIKFIPDPERY 97 (448)
T ss_dssp CCSCEEEGGGGTCCCEEEEECHHHHHHHHHHHHH---HTCEEEEECSSEEEESCEECCTTEEEEES--SEEEECCCGGGG
T ss_pred CCCcEEEEEecccCCCCCeecHHHHHHHHHhhhh---cCCeEEEECCCcEEEeeeEeCCCcEEEEE--EEEEecCCHHHh
Confidence 4667999999999999999999999999999876 68999999999999999999999999997 999999999998
Q ss_pred -CCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCC--hhhhhhhccC----------------------
Q 011659 128 -PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--ELWWRKFRAG---------------------- 182 (480)
Q Consensus 128 -~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g--~~~w~~~~~~---------------------- 182 (480)
|... ..++|.+. ..+.+||++.+++||+|+|. |+|||+| +.||.+....
T Consensus 98 ~p~~~---~~~~G~~~--~~~~~lI~~~~~~ni~ItG~-GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 171 (448)
T 3jur_A 98 LPVVL---TRFEGIEL--YNYSPLVYALDCENVAITGS-GVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMA 171 (448)
T ss_dssp CSCEE---EEETTEEE--EESCCSEEEESCEEEEEESS-CEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHH
T ss_pred Ccccc---cccccccc--cCccceEEEeCcEeeEEEEe-EEEECCCCchhhhhhcccccccccccccccccchhhhhhhh
Confidence 4321 12333321 23467999999999999996 9999999 8899754310
Q ss_pred ------------CCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccE
Q 011659 183 ------------ELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNT 250 (480)
Q Consensus 183 ------------~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV 250 (480)
.....||++|.|.+|+|++|++++++|+|+|++++..|+|++|++++|.++ ++|+||||+.+|+||
T Consensus 172 ~~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV 249 (448)
T 3jur_A 172 ERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYM 249 (448)
T ss_dssp HHTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEE
T ss_pred cccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCE
Confidence 123578999999999999999999999999999999999999999999987 689999999999999
Q ss_pred EEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc-ceEEEcccccCceeEEEEEeeEEeCCCceEEEE
Q 011659 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329 (480)
Q Consensus 251 ~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~-~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~ 329 (480)
+|+||+|.++||||+++++++.+|...+.|++||+|+||+|++..+ +||+|||++.++++||+|+||+|.++.+|++||
T Consensus 250 ~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIK 329 (448)
T 3jur_A 250 LIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLK 329 (448)
T ss_dssp EEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEE
T ss_pred EEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEE
Confidence 9999999999999999999988888888999999999999954333 499999999999999999999999999999999
Q ss_pred eecCCCCceecEEEEeeEecccceeE-EEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccCCCCeeeEE
Q 011659 330 TAVGRGGFVKDVYVRRMTMKTMKWAF-WITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGIC 408 (480)
Q Consensus 330 s~~~~~g~v~nI~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~~i~ 408 (480)
|+.+++|.|+||+|+|++|+++.+|+ .|++.|+... +...+.|+||+|+||++++.+.++.|.|+++.||++|+
T Consensus 330 t~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I~ 404 (448)
T 3jur_A 330 TNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDIL 404 (448)
T ss_dssp CCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEEE
T ss_pred EEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeEE
Confidence 99988999999999999999999988 9999997541 23346999999999999988889999999999999999
Q ss_pred EEeEEEEec
Q 011659 409 ISNVTIELT 417 (480)
Q Consensus 409 ~~ni~~~~~ 417 (480)
|+||+++..
T Consensus 405 ~~nv~i~~~ 413 (448)
T 3jur_A 405 ISDTIIEGA 413 (448)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEEcc
Confidence 999999975
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.2e-61 Score=493.16 Aligned_cols=348 Identities=26% Similarity=0.389 Sum_probs=300.2
Q ss_pred eeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCC---CeeeeeeecccccceEEEeeCcEEEecCCCCCC
Q 011659 51 HSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPP---GKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEW 127 (480)
Q Consensus 51 ~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~---G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~ 127 (480)
.+++|++|| .+|||+|||+||++|+ + |++|+||+ |+|++++|.|+|+++|++++||+|+++.++.+|
T Consensus 13 ~~~~v~~~G-----~~~dT~aiq~Ai~ac~----~-Gg~v~~~~~~~g~yl~g~i~l~s~vtL~l~~Ga~L~~s~~~~~y 82 (376)
T 1bhe_A 13 SSCTTLKAD-----SSTATSTIQKALNNCD----Q-GKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSF 82 (376)
T ss_dssp CEEEEEECC-----SSBCHHHHHHHHTTCC----T-TCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSGGG
T ss_pred CeEEECCCC-----CCccHHHHHHHHHHhc----c-CCcEEEECCCCceEEEeEEEECCCCEEEECCCeEEEeCCCHHHC
Confidence 369999986 4799999999999875 3 55666654 799999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCC--------hhhhhhhcc---CCCCcCCCeEEEEEe
Q 011659 128 PVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQG--------ELWWRKFRA---GELKYTRPYLIEIMY 196 (480)
Q Consensus 128 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g--------~~~w~~~~~---~~~~~~~p~~i~~~~ 196 (480)
+.... .+ .+.+.++....+||.+.+++||+|+|. |+|||+| +.||..... ......||++|.|.+
T Consensus 83 ~~~~~--~~-g~~~~~g~~~~~~I~~~~~~ni~I~G~-G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 83 ENAPS--SC-GVVDKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp BSSTT--CS-SCEESCSCCBCCSEEEESCBSCEEECS-SEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred cCCCc--cc-cccccCCCCcccEEEEECCEeEEEEeC-EEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 75321 11 122222223467999999999999996 9999999 579975321 112346899999999
Q ss_pred eecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcc
Q 011659 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276 (480)
Q Consensus 197 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~ 276 (480)
|+|++|+|++++|+|.|++++..|++++|++++|.++..++|+||||+.+|+||+|+||+|.++||||+++++.
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~------ 232 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYK------ 232 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECT------
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccC------
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999742
Q ss_pred cCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEE
Q 011659 277 YGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 277 ~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~ 356 (480)
...+++||+|+||+|..+ |||+||||.. +++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.+||.
T Consensus 233 ~~~~s~nI~I~n~~~~~g--hGisiGSe~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~ 309 (376)
T 1bhe_A 233 GRAETRNISILHNDFGTG--HGMSIGSETM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIV 309 (376)
T ss_dssp TSCCEEEEEEEEEEECSS--SCEEEEEEES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEE
T ss_pred CCCCceEEEEEeeEEEcc--ccEEeccCCc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEE
Confidence 134699999999999963 6999999987 8999999999999999999999999989999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 357 ITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 357 i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
|++.|.... ++..+.|+||+|+||++++.. ++.|.|+++.||++|+|+||+++.. ..|.|.|++.
T Consensus 310 i~~~y~~~~-----~~~~~~i~ni~~~ni~gt~~~-~~~l~g~~~~~~~~I~l~nv~l~~~-----~~~~~~~~~~ 374 (376)
T 1bhe_A 310 IDTVYEKKE-----GSNVPDWSDITFKDVTSETKG-VVVLNGENAKKPIEVTMKNVKLTSD-----STWQIKNVNV 374 (376)
T ss_dssp EETTSSCCC-----CCCCCEEEEEEEEEEEECSCC-EEEEECTTCSSCEEEEEEEEECCTT-----CEEEEESEEE
T ss_pred EEeeccCCC-----CCcCcEEEEEEEEEEEEEecc-eEEEEeCCCCCeeeEEEEeEEEecC-----CCceEEEEEe
Confidence 999987542 334568999999999999765 6899999999999999999999864 3599999864
No 3
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.3e-60 Score=511.41 Aligned_cols=358 Identities=24% Similarity=0.354 Sum_probs=301.1
Q ss_pred cccCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCC
Q 011659 46 ISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEK 125 (480)
Q Consensus 46 ~~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~ 125 (480)
.++.+.++||+||||+|||.+|||+|||+||++|+ .|++|+||+|+|++++|.|+|+++|++++||+|+++.+++
T Consensus 150 T~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~c~-----~g~~v~vP~G~y~~g~i~lks~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 150 TSAKPQIVNVRDFGAIDDGKTLNTKAIQQAIDSCK-----PGCRVEIPAGTYKSGALWLKSDMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCCCCEEEGGGGTCCSSSSCCCHHHHHHHHHTCC-----TTEEEEECSEEEEECCEECCSSEEEEECTTEEEEECSCGG
T ss_pred cccCCCEEecccccccCCCCccCHHHHHHHHHhcC-----CCCEEEECCCceEecceeccCceEEEecCCcEEEecCCHH
Confidence 34567799999999999999999999999999874 3889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccccCCCCcceeeEEEec--------eeceEEeCccceEeCCChhhhhhhc--cC-------------
Q 011659 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTN--------LTDVVITGDNGTIDGQGELWWRKFR--AG------------- 182 (480)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~--------~~nv~I~G~~G~idG~g~~~w~~~~--~~------------- 182 (480)
+|+....+..+. +..++.++|.+.+ ++||+|+|. |+|||+|..||+... ..
T Consensus 225 ~y~~~~~~~~~~-----~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~-GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~ 298 (608)
T 2uvf_A 225 DYPAGYRLYPYS-----TIERPASLINAIDPNNSKPGTFRNIRITGS-GVIDGNGWLRAKTAEITDELGRSLPQYVASKN 298 (608)
T ss_dssp GSCEEECSSTTC-----CSCEECCSEEECCSSCCCTTSEEEEEEESS-CEEECCCBCEEEEEEEECTTSCEEEEECCCCT
T ss_pred HCcCcceeeecc-----ccccccceEEeeccccccccceeeEEEEee-EEEcCccccccccccccccccccccccccccc
Confidence 987421111111 1123456888887 799999996 999999988874210 00
Q ss_pred ---------------------CC-----CcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCC
Q 011659 183 ---------------------EL-----KYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS 236 (480)
Q Consensus 183 ---------------------~~-----~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~ 236 (480)
.. ...||++|.|.+|+|++|+|++++|+++|++++..|+|++|+++++.. ..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~ 377 (608)
T 2uvf_A 299 SKVHEDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDA 377 (608)
T ss_dssp TTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTC
T ss_pred ccccccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCC
Confidence 00 124899999999999999999999999999999999999999999865 457
Q ss_pred CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEe
Q 011659 237 PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAED 316 (480)
Q Consensus 237 ~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n 316 (480)
+|+||||+.+|+||+|+||+|.++||||+++++++.+|.. .++++||+|+||+|..++ .++.|||+..++++||+|+|
T Consensus 378 ~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~-~~~s~nI~I~n~~~~~gh-g~~~iGS~~~~~v~nI~v~n 455 (608)
T 2uvf_A 378 NNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQE-QEPMKGAWLFNNYFRMGH-GAIVTGSHTGAWIEDILAEN 455 (608)
T ss_dssp TTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGG-SCCEEEEEEESCEECSSS-CSEEEESCCTTCEEEEEEES
T ss_pred CCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccc-cccccCEEEEeEEEeCCC-CeEEEcccCCCCEEEEEEEe
Confidence 8999999999999999999999999999999999988887 788999999999999876 45679999999999999999
Q ss_pred eEEeCCCceEEEEeecCCCCceecEEEEeeEeccc-ceeEEEEeecCCCCC-CCCCCC-CCCeEEeEEEEEeEEeccc--
Q 011659 317 ITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM-KWAFWITGSYGSHPD-NNYDPH-ALPVIQNINYRDMVAENVT-- 391 (480)
Q Consensus 317 ~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~-~~~i~i~~~~~~~~~-~~~~~~-~~~~i~nIt~~nI~~~~~~-- 391 (480)
|+|.++.+|++||++.+++|.|+||+|+|++|+++ .+||.|++.|+.... ..+.+. ..+.+++|+|+||+..+..
T Consensus 456 ~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt 535 (608)
T 2uvf_A 456 NVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGK 535 (608)
T ss_dssp CEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSS
T ss_pred EEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeece
Confidence 99999999999999998899999999999999999 599999999976432 122222 2346888888888877653
Q ss_pred -eeEEEec--cCCCCeeeEEEEeEEEEec
Q 011659 392 -MAARLEG--IAGDPFTGICISNVTIELT 417 (480)
Q Consensus 392 -~~~~i~g--~~~~~i~~i~~~ni~~~~~ 417 (480)
.++.|.+ .+..+|++|+|+||+++..
T Consensus 536 ~~~i~i~g~~~~~~p~~ni~~~nv~i~~~ 564 (608)
T 2uvf_A 536 NPSIEIKGDTANKAWHRLVHVNNVQLNNV 564 (608)
T ss_dssp SCSEEEECBGGGTBCEEEEEEEEEEEESC
T ss_pred EEeEEEEEEcCCCCccccEEEEeEEEEcc
Confidence 3555655 4567899999999999875
No 4
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=8.6e-60 Score=484.36 Aligned_cols=337 Identities=17% Similarity=0.277 Sum_probs=287.3
Q ss_pred ccccccCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeee-eccc--ccceEEEeeCcEEE
Q 011659 43 YSAISCRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGS-FNLT--SHFTLFLHKDAVLL 119 (480)
Q Consensus 43 ~~~~~~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~-l~l~--sn~~l~~~~ga~i~ 119 (480)
.++..++..+++|+||||++||++|||+|||+||++|+ ++++|+||+|+|++++ |.|+ ++++|+++ | +++
T Consensus 11 ~~~~~~~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~ac~-----~g~~V~vP~G~Yli~~~l~l~g~s~v~l~l~-G-~~l 83 (422)
T 1rmg_A 11 SASTKGATKTCNILSYGAVADNSTDVGPAITSAWAACK-----SGGLVYIPSGNYALNTWVTLTGGSATAIQLD-G-IIY 83 (422)
T ss_dssp CHHHHHHHCEEEGGGGTCCCSSSSBCHHHHHHHHHHHT-----BTCEEEECSSEEEECSCEEEESCEEEEEEEC-S-EEE
T ss_pred chhhccCCcEEEeeeccccCCCCcccHHHHHHHHHHCC-----CCCEEEECCCeEEeCCceeecCCCeEEEEEc-C-cEE
Confidence 33344457799999999999999999999999999873 5889999999999985 9999 57777775 4 555
Q ss_pred ecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeec
Q 011659 120 ASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQN 199 (480)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~n 199 (480)
...+.. ..+..++...+++++.|+|. |+|||+|+.||.. ...||++|+|.+|+|
T Consensus 84 ~~~~~~-------------------~~~~~~~~~~~~~~i~i~G~-G~IdG~G~~~w~~------~~~rp~~i~~~~~~n 137 (422)
T 1rmg_A 84 RTGTAS-------------------GNMIAVTDTTDFELFSSTSK-GAVQGFGYVYHAE------GTYGARILRLTDVTH 137 (422)
T ss_dssp ECCCCS-------------------SEEEEEEEEEEEEEECSSSC-CEEECCTHHHHTT------TCCCCEEEEEEEEEE
T ss_pred cccCCC-------------------CceEEEEecCceeEEeeccC-EEEECCcchhhcC------CCCCceEEEEcccce
Confidence 433210 01223456677788888996 9999999999963 123899999999999
Q ss_pred EEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCC
Q 011659 200 IQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279 (480)
Q Consensus 200 v~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~ 279 (480)
++|+|++++|++.|++++..|+|++|+|++|.+ .+++|+|||++.+ +||+|+||+|.++||||+++++
T Consensus 138 v~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~---------- 205 (422)
T 1rmg_A 138 FSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSP---------- 205 (422)
T ss_dssp EEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEE----------
T ss_pred EEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCC----------
Confidence 999999999999999999999999999999999 4467999999998 9999999999999999999985
Q ss_pred CceeEEEEEEEEeCCCcceEEEcccc-cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEE
Q 011659 280 PTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358 (480)
Q Consensus 280 ~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 358 (480)
++||+|+||+|... +||+|||++ .+.++||+|+||+|.++.+|++||++.+ .|.|+||+|+|++|+++.+||.|+
T Consensus 206 -~~nI~I~n~~~~~~--~GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~ 281 (422)
T 1rmg_A 206 -ANNILVESIYCNWS--GGCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDID 281 (422)
T ss_dssp -EEEEEEEEEEEESS--SEEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEE
T ss_pred -CcCEEEEeEEEcCC--cceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEE
Confidence 89999999999864 699999986 4679999999999999999999999764 479999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCeEEeEEEEEeEEecc----ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 359 GSYGSHPDNNYDPHALPVIQNINYRDMVAENV----TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~----~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
+.|..... .+...+.|+||+|+||+++.. ..++.|.|.++.+|+||+|+||+++..+ +....+.|.|+.+
T Consensus 282 ~~y~~~~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~-g~~~~~~C~n~~g 355 (422)
T 1rmg_A 282 GYWSSMTA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTES-GSSELYLCRSAYG 355 (422)
T ss_dssp TBCTTSCC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESS-SSCEEEEEESEEE
T ss_pred eeccCCCc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCC-CCccceEEECCCc
Confidence 98865321 133456999999999999874 3589999999999999999999999863 3456799999985
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=3.8e-55 Score=440.92 Aligned_cols=319 Identities=21% Similarity=0.282 Sum_probs=270.5
Q ss_pred ceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee-cccccceEEEeeCcEEEecCCCCCCC
Q 011659 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF-NLTSHFTLFLHKDAVLLASQDEKEWP 128 (480)
Q Consensus 50 ~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l-~l~sn~~l~~~~ga~i~~~~~~~~~~ 128 (480)
..+++|++ ++|||+|+++|++ .++++|+||+|+|+. | .|+++++|+++ +++.+. +..|.
T Consensus 27 ~~~Ctv~~-----------~~aiq~ai~~c~~---~~g~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~ 86 (362)
T 1czf_A 27 RDSCTFTT-----------AAAAKAGKAKCST---ITLNNIEVPAGTTLD--LTGLTSGTKVIFE--GTTTFQ--YEEWA 86 (362)
T ss_dssp -CEEEESS-----------HHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC
T ss_pred CCEEEECC-----------HHHHHHHHHHhhc---cCCCEEEECCCEEEE--eeccCCCeEEEEe--CcEEec--cccCC
Confidence 35788876 7899999999975 578899999999973 5 78889999886 344442 23332
Q ss_pred CCCCCCCCCccccCCCCcceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEE
Q 011659 129 VIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTL 207 (480)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i 207 (480)
..|+.+ +.+||+|+|. +|+|||+|+.||+.... ....||++++|.+|+|++|+|+++
T Consensus 87 -------------------g~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti 144 (362)
T 1czf_A 87 -------------------GPLISM-SGEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNI 144 (362)
T ss_dssp -------------------CCSEEE-EEESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEE
T ss_pred -------------------CcEEEE-eCccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEE
Confidence 146666 4499999993 39999999999985432 256799999999999999999999
Q ss_pred EeCCCceEEEeccccEEEEeEEEECCCC----CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCcee
Q 011659 208 INSPSWNVHPVYSSSVIVQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQ 283 (480)
Q Consensus 208 ~ns~~~~i~~~~~~nv~i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~n 283 (480)
+|+|.|++++. |+|++|++++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+|
T Consensus 145 ~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks------------g~n 211 (362)
T 1czf_A 145 KNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS------------GEN 211 (362)
T ss_dssp ECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS------------EEE
T ss_pred ecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC------------CeE
Confidence 99999999999 9999999999999643 789999999999999999999999999999998 499
Q ss_pred EEEEEEEEeCCCcceEEEccc---ccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccc-eeEEEEe
Q 011659 284 LIIRRLTCISPFSAVIALGSE---MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-WAFWITG 359 (480)
Q Consensus 284 i~I~n~~~~~~~~~gi~igs~---~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~ 359 (480)
|+|+||+|..+ |||+|||+ ..+.++||+|+||+|.++.+|++||+|.+++|.|+||+|+|++|+++. +||.|++
T Consensus 212 I~i~n~~~~~g--hGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~ 289 (362)
T 1czf_A 212 IWFTGGTCIGG--HGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQ 289 (362)
T ss_dssp EEEESCEEESS--CCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEeCC--ceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEE
Confidence 99999999964 68999997 347899999999999999999999999988899999999999999986 7999999
Q ss_pred ecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeee
Q 011659 360 SYGSHPDNNYDPHALPVIQNINYRDMVAENVT--MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431 (480)
Q Consensus 360 ~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~ 431 (480)
.|.... ....|...+.|+||+|+||+++... .++.|.|. ..+|+||+|+||+++.. .....|.|+.
T Consensus 290 ~Y~~~~-~~~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~ 357 (362)
T 1czf_A 290 DYEDGK-PTGKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGG----KKSTACKNFP 357 (362)
T ss_dssp EEETTE-ECSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESS----BCCSCCBSCC
T ss_pred ecCCCC-CCCCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcC----CCcccCcCCC
Confidence 997532 1223444568999999999999875 78999997 78999999999999863 2356788876
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=4e-54 Score=431.07 Aligned_cols=316 Identities=21% Similarity=0.279 Sum_probs=268.1
Q ss_pred hhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee-cccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCC
Q 011659 67 SNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF-NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGG 145 (480)
Q Consensus 67 ddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l-~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~ 145 (480)
.||+|||+||++|++ .++++|+||+|+|+. | .|+++++|.++. .+.+. +..|.
T Consensus 6 ~dt~aiq~ai~~c~~---~~g~~v~vP~G~~~~--l~~l~~~~~l~~~g--~~~~~--~~~w~----------------- 59 (339)
T 2iq7_A 6 TDAAAAIKGKASCTS---IILNGIVVPAGTTLD--MTGLKSGTTVTFQG--KTTFG--YKEWE----------------- 59 (339)
T ss_dssp SCHHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEES--EEEEC--CCCSC-----------------
T ss_pred CCHHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEeC--cEEcc--ccccc-----------------
Confidence 479999999999975 568899999999984 5 778899998863 34432 22332
Q ss_pred cceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEE
Q 011659 146 RYSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVI 224 (480)
Q Consensus 146 ~~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~ 224 (480)
..|+.+.. +||+|+|. +|+|||+|+.||+..... ....||++|.|.+|+|++|++++++|+|.|++++..|++++
T Consensus 60 --g~~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~ 135 (339)
T 2iq7_A 60 --GPLISFSG-TNININGASGHSIDCQGSRWWDSKGSN-GGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLG 135 (339)
T ss_dssp --CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGG-SSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEE
T ss_pred --CcEEEEEc-ccEEEEcCCCCEEECCccccccccccc-CCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEE
Confidence 14666655 99999995 379999999999754322 24678999999999999999999999999999999999999
Q ss_pred EEeEEEECCCC----CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEE
Q 011659 225 VQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300 (480)
Q Consensus 225 i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~ 300 (480)
|++++|.++.. ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|..+ +||+
T Consensus 136 i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~g--hGis 201 (339)
T 2iq7_A 136 VYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS------------GTNITFTGGTCSGG--HGLS 201 (339)
T ss_dssp EESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEESS--CCEE
T ss_pred EEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC------------CccEEEEeEEEECC--ceEE
Confidence 99999999753 789999999999999999999999999999998 49999999999974 5899
Q ss_pred Eccc---ccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccce-eEEEEeecCCCCCCCCCCCCCCe
Q 011659 301 LGSE---MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHALPV 376 (480)
Q Consensus 301 igs~---~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~ 376 (480)
|||+ ..+.++||+|+||+|.++.+|++||+|.+++|.|+||+|+|++|+++.+ ||.|++.|.... ....|...+.
T Consensus 202 iGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~ 280 (339)
T 2iq7_A 202 IGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVP 280 (339)
T ss_dssp EEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSC
T ss_pred ECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCce
Confidence 9995 3468999999999999999999999999888999999999999999876 999999997631 1223444568
Q ss_pred EEeEEEEEeEEeccc--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 377 IQNINYRDMVAENVT--MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 377 i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
|+||+|+||+++... .++.|.|. ..||+||+|+||+++.. ...+.|.|+..
T Consensus 281 i~ni~~~ni~gt~~~~~~~~~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 333 (339)
T 2iq7_A 281 ITGLTLSKITGSVASSGTNVYILCA-SGACSNWKWSGVSVTGG----KKSTKCSNIPS 333 (339)
T ss_dssp EEEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESS----BCCSCCBCCCT
T ss_pred EEEEEEEeEEEEeCCCCEEEEEEeC-CCcEecEEEEeEEEEcC----CCcccccCCCC
Confidence 999999999999875 78999994 88999999999999853 33567888763
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=9.7e-54 Score=427.76 Aligned_cols=316 Identities=20% Similarity=0.267 Sum_probs=267.1
Q ss_pred chhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee-cccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCC
Q 011659 66 TSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF-NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG 144 (480)
Q Consensus 66 tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l-~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~ 144 (480)
..||+|||+|+++|++ .++++|+||+|+|+. | .|+++++|.++ +++.+. +..|.
T Consensus 5 ~~~t~aiq~ai~~c~~---~gg~~v~vP~G~~~~--l~~l~~~~~l~~~--g~~~~~--~~~w~---------------- 59 (336)
T 1nhc_A 5 FTSASEASESISSCSD---VVLSSIEVPAGETLD--LSDAADGSTITFE--GTTSFG--YKEWK---------------- 59 (336)
T ss_dssp ESSHHHHHHHGGGCSE---EEEESCEECTTCCEE--CTTCCTTCEEEEE--SEEEEC--CCCSC----------------
T ss_pred ECCHHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEe--ceEEcc--ccccc----------------
Confidence 3579999999999975 567899999999973 5 67888888885 344432 22332
Q ss_pred CcceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccE
Q 011659 145 GRYSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSV 223 (480)
Q Consensus 145 ~~~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv 223 (480)
..|+.+. .+||+|+|. +|+|||+|+.||+.... .....||+++.|.+|+|++|++++++|+|.|++++. |+++
T Consensus 60 ---g~li~~~-~~nv~I~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv 133 (336)
T 1nhc_A 60 ---GPLIRFG-GKDLTVTMADGAVIDGDGSRWWDSKGT-NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNV 133 (336)
T ss_dssp ---CCSEECC-EESCEEEECTTCEEECCGGGTCCSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEE
T ss_pred ---CcEEEEe-cCCEEEEcCCCeEEECCccccccccCc-CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCE
Confidence 1356654 599999995 37999999999985432 224678999999999999999999999999999999 9999
Q ss_pred EEEeEEEECCCC----CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceE
Q 011659 224 IVQGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI 299 (480)
Q Consensus 224 ~i~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi 299 (480)
+|++++|.++.. ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|+.+ +||
T Consensus 134 ~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks------------g~nI~i~n~~~~~g--hGi 199 (336)
T 1nhc_A 134 HLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS------------GESISFTGGTCSGG--HGL 199 (336)
T ss_dssp EEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS------------EEEEEEESCEEESS--SEE
T ss_pred EEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC------------CeEEEEEeEEEECC--cCc
Confidence 999999999853 799999999999999999999999999999998 49999999999964 699
Q ss_pred EEcccc---cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccce-eEEEEeecCCCCCCCCCCCCCC
Q 011659 300 ALGSEM---SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHALP 375 (480)
Q Consensus 300 ~igs~~---~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~ 375 (480)
+|||+. .+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.+ ||.|++.|.... ....|...+
T Consensus 200 siGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~ 278 (336)
T 1nhc_A 200 SIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGI 278 (336)
T ss_dssp EEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSS
T ss_pred eEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCc
Confidence 999963 368999999999999999999999999888999999999999999975 999999997632 122344456
Q ss_pred eEEeEEEEEeEEeccc--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 376 VIQNINYRDMVAENVT--MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 376 ~i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
.|+||+|+||+++... .++.|.| +..+|+||+|+||+++.. ...+.|.|+..
T Consensus 279 ~i~~i~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 332 (336)
T 1nhc_A 279 PITDVTVDGVTGTLEDDATQVYILC-GDGSCSDWTWSGVDLSGG----KTSDKCENVPS 332 (336)
T ss_dssp CEEEEEEEEEEEEECTTCEEEEEEC-CTTCEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred eEEEEEEEeEEEEeCCCCEEEEEEc-CCCcEecEEEEeEEEEcC----CCCcccCCCCC
Confidence 8999999999999875 7899999 488999999999999863 23567888763
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.6e-53 Score=427.79 Aligned_cols=317 Identities=19% Similarity=0.275 Sum_probs=266.5
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee-cccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCc
Q 011659 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF-NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146 (480)
Q Consensus 68 dT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l-~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (480)
||+|||+|+++|++ .++++|+||+|+|+. | .|+++++|.++ +.+++. ...|. +
T Consensus 7 ~t~aiq~ai~~c~~---~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~---------~-------- 60 (349)
T 1hg8_A 7 EYSGLATAVSSCKN---IVLNGFQVPTGKQLD--LSSLQNDSTVTFK--GTTTFA--TTADN---------D-------- 60 (349)
T ss_dssp SGGGHHHHHHHCSE---EEECCCEECTTCCEE--ETTCCTTCEEEEC--SEEEEC--CCCCT---------T--------
T ss_pred CHHHHHHHHHhccc---cCCCEEEECCCEEEE--eeccCCCeEEEEc--Cceecc--ccccc---------C--------
Confidence 78999999999975 568899999999984 5 78889999885 344432 22331 1
Q ss_pred ceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCCCCcCCCeEEEE-E-eeecEEEEeEEEEeCCCceEEEeccccE
Q 011659 147 YSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGELKYTRPYLIEI-M-YSQNIQISNLTLINSPSWNVHPVYSSSV 223 (480)
Q Consensus 147 ~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~~~~~~p~~i~~-~-~~~nv~I~~v~i~ns~~~~i~~~~~~nv 223 (480)
..|+.+.. +||+|+|. +|+|||+|+.||+..........||++|.| . .|+|++|++++++|+|.|++++..|+++
T Consensus 61 -g~~i~~~~-~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv 138 (349)
T 1hg8_A 61 -FNPIVISG-SNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQL 138 (349)
T ss_dssp -CCSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEE
T ss_pred -CceEEEEC-ccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCE
Confidence 14677644 99999993 399999999999864332222368999999 7 7889999999999999999999999999
Q ss_pred EEEeEEEECCC-C-----------CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEE
Q 011659 224 IVQGITILAPV-T-----------SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291 (480)
Q Consensus 224 ~i~~~~i~~~~-~-----------~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~ 291 (480)
+|++++|.++. + ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|
T Consensus 139 ~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~ 206 (349)
T 1hg8_A 139 TISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS------------GTNIVVSNMYC 206 (349)
T ss_dssp EEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS------------EEEEEEEEEEE
T ss_pred EEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC------------CeEEEEEeEEE
Confidence 99999999863 2 589999999999999999999999999999998 59999999999
Q ss_pred eCCCcceEEEccc---ccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccc-eeEEEEeecCCCCCC
Q 011659 292 ISPFSAVIALGSE---MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMK-WAFWITGSYGSHPDN 367 (480)
Q Consensus 292 ~~~~~~gi~igs~---~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~ 367 (480)
..+ +||+|||+ ..+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++. +||.|++.|.... .
T Consensus 207 ~~g--hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~ 283 (349)
T 1hg8_A 207 SGG--HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-P 283 (349)
T ss_dssp ESS--CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-B
T ss_pred eCC--cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCC-C
Confidence 964 68999998 457899999999999999999999999988899999999999999996 7999999997632 1
Q ss_pred CCCCCCCCeEEeEEEEEeEEeccc--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 368 NYDPHALPVIQNINYRDMVAENVT--MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 368 ~~~~~~~~~i~nIt~~nI~~~~~~--~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
...|...+.|+||+|+||+++... .++.|.|. +.||+||+|+||+++.. .....|.|+..
T Consensus 284 ~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 345 (349)
T 1hg8_A 284 TGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGG----GKTSSCNYPTN 345 (349)
T ss_dssp CSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECC----SSCCEECSSSS
T ss_pred CCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcC----CCCeeeeCCCC
Confidence 223444568999999999998875 68999998 68999999999999863 23467888764
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3e-53 Score=424.39 Aligned_cols=313 Identities=24% Similarity=0.321 Sum_probs=266.2
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeee-cccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCc
Q 011659 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSF-NLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGR 146 (480)
Q Consensus 68 dT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l-~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (480)
-++|||+|+++|++ .++++|+||+|+|+. | .|+++++|.++ +++.+. +..|.
T Consensus 11 g~~aiq~ai~~c~~---~gg~~v~vP~G~~l~--l~~l~~~~~l~~~--g~~~~~--~~~w~------------------ 63 (339)
T 1ia5_A 11 GASSASKSKTSCST---IVLSNVAVPSGTTLD--LTKLNDGTHVIFS--GETTFG--YKEWS------------------ 63 (339)
T ss_dssp HHHHHHHHGGGCSE---EEEESCEECTTCCEE--ECSCCTTCEEEEE--SEEEEC--CCCSC------------------
T ss_pred chHHHHHHHHHhhc---cCCCeEEECCCEEEE--eeccCCCeEEEEe--CcEEcc--ccccc------------------
Confidence 36799999999975 568899999999984 5 78899999886 344442 22332
Q ss_pred ceeeEEEeceeceEEeCc-cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEeccccEEE
Q 011659 147 YSSLIFGTNLTDVVITGD-NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIV 225 (480)
Q Consensus 147 ~~~~i~~~~~~nv~I~G~-~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i 225 (480)
..|+.+.. +||+|+|. +|+|||+|+.||+..... ....||++|+|.+|+|++|++++++|+|.|++++..|++++|
T Consensus 64 -g~li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~-~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 64 -GPLISVSG-SDLTITGASGHSINGDGSRWWDGEGGN-GGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTL 140 (339)
T ss_dssp -CCSEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTT-SSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEE
T ss_pred -CcEEEEEc-CcEEEEcCCCeEEeCCCCccccccccC-CCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEE
Confidence 14676655 99999995 379999999999854322 246789999999999999999999999999999999999999
Q ss_pred EeEEEECCCC----CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEE
Q 011659 226 QGITILAPVT----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301 (480)
Q Consensus 226 ~~~~i~~~~~----~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~i 301 (480)
++++|.++.+ ++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|..+ +||+|
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~g--hGisi 206 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS------------GENIYFSGGYCSGG--HGLSI 206 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS------------EEEEEEESCEEESS--SCEEE
T ss_pred eeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC------------CeEEEEEeEEEECC--ceEEE
Confidence 9999999743 789999999999999999999999999999998 49999999999964 68999
Q ss_pred cccc---cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccce-eEEEEeecCCCCCCCCCCCCCCeE
Q 011659 302 GSEM---SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW-AFWITGSYGSHPDNNYDPHALPVI 377 (480)
Q Consensus 302 gs~~---~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i 377 (480)
||+. .+.++||+|+||+|.++.+|++||++.+++|.|+||+|+|++|+++.. ||.|++.|.. + ...|...+.|
T Consensus 207 GS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~--~~~p~~~~~i 283 (339)
T 1ia5_A 207 GSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-T--SSTPTTGVPI 283 (339)
T ss_dssp EEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC-T--TSCCCSSSCE
T ss_pred CcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC-C--CCCCcCCceE
Confidence 9953 468999999999999999999999999888999999999999999876 9999999942 2 2234445689
Q ss_pred EeEEEEEeEEeccc--eeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeec
Q 011659 378 QNINYRDMVAENVT--MAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITG 432 (480)
Q Consensus 378 ~nIt~~nI~~~~~~--~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~ 432 (480)
+||+|+||+++... .++.|.|. ..||+||+|+||+++.. ...+.|.|+..
T Consensus 284 ~ni~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~~ 335 (339)
T 1ia5_A 284 TDFVLDNVHGSVVSSGTNILISCG-SGSCSDWTWTDVSVSGG----KTSSKCTNVPS 335 (339)
T ss_dssp EEEEEEEEEEEECTTSEEEEEECC-TTCEEEEEEEEEEEESS----BCCSCCBSCCT
T ss_pred EEEEEEeEEEEeCCCCEEEEEEeC-CCCEecEEEEeEEEECC----CCCeeeECCCC
Confidence 99999999999875 78999995 88999999999999853 33567888763
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=2.7e-53 Score=423.11 Aligned_cols=307 Identities=20% Similarity=0.225 Sum_probs=260.7
Q ss_pred HHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcce
Q 011659 69 TKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYS 148 (480)
Q Consensus 69 T~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 148 (480)
++|||+ +++|++ .++++|+||+|+|+ .|.|+++++|+++ +++.+. +..|. .
T Consensus 8 ~~aiq~-i~aC~~---~gg~~v~vP~G~~l--~l~l~~~~~l~~~--g~~~~~--~~~w~-------------------~ 58 (335)
T 1k5c_A 8 VDDAKD-IAGCSA---VTLNGFTVPAGNTL--VLNPDKGATVTMA--GDITFA--KTTLD-------------------G 58 (335)
T ss_dssp TTGGGG-CTTCSE---EEECCEEECTTCCE--EECCCTTCEEEEC--SCEEEC--CCCSC-------------------S
T ss_pred HHHhHH-HHhccc---CCCCEEEECCCEEE--EEEeCCCeEEEEe--ccEecc--ccccc-------------------C
Confidence 689999 999875 67889999999998 5788899999886 344442 23332 1
Q ss_pred eeEEEeceeceEEeC-ccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCceEEEecccc-EEEE
Q 011659 149 SLIFGTNLTDVVITG-DNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSWNVHPVYSSS-VIVQ 226 (480)
Q Consensus 149 ~~i~~~~~~nv~I~G-~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~n-v~i~ 226 (480)
.|+.+. .+||+|+| . |+|||+|+.||+..... ....||++|+|.+|+ ++|++++++|+|.|++++..|+| |+|+
T Consensus 59 ~~i~~~-~~ni~I~G~~-G~idG~G~~ww~~~~~~-~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~ 134 (335)
T 1k5c_A 59 PLFTID-GTGINFVGAD-HIFDGNGALYWDGKGTN-NGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLD 134 (335)
T ss_dssp CSEEEE-EEEEEEECTT-CEEECCGGGTCCSCTTT-SSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEE
T ss_pred cEEEEE-ccCEEEEeCc-cEEcCChhHhhhccccc-CCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEE
Confidence 467765 59999999 5 99999999999854322 346799999999999 99999999999999999999999 9999
Q ss_pred eEEEECCCC-----CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEE
Q 011659 227 GITILAPVT-----SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL 301 (480)
Q Consensus 227 ~~~i~~~~~-----~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~i 301 (480)
+++|.++.+ ++|+||||+ +|+||+|+||+|.++||||++|+ .+||+|+||+|..+ |||+|
T Consensus 135 ~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiks------------g~nI~i~n~~~~~g--hGisI 199 (335)
T 1k5c_A 135 GITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAIND------------GNNIRFENNQCSGG--HGISI 199 (335)
T ss_dssp SCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEE------------EEEEEEESCEEESS--CCEEE
T ss_pred EEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeC------------CeeEEEEEEEEECC--ccCeE
Confidence 999999753 799999999 99999999999999999999998 39999999999964 68999
Q ss_pred cccc-cCceeEEEEEeeEEeCCCceEEEEeecCCC-CceecEEEEeeEecccc-eeEEEEeecCCCCCCCCCCCCCCeEE
Q 011659 302 GSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDVYVRRMTMKTMK-WAFWITGSYGSHPDNNYDPHALPVIQ 378 (480)
Q Consensus 302 gs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~ 378 (480)
||++ .+.++||+|+||+|.++..|++||++.+++ |.|+||+|+||+|+++. +||.|++.|.. + ...|...+.|+
T Consensus 200 GS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~--~~~p~~~~~i~ 276 (335)
T 1k5c_A 200 GSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD-D--VGNPGTGAPFS 276 (335)
T ss_dssp EEECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-S--SSSCCSSSCEE
T ss_pred eeccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC-C--CCCCCCCceEE
Confidence 9997 689999999999999999999999999888 99999999999999997 79999999942 2 22344446899
Q ss_pred eEEEEEeE--Eecc--ceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeee
Q 011659 379 NINYRDMV--AENV--TMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDIT 431 (480)
Q Consensus 379 nIt~~nI~--~~~~--~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~ 431 (480)
||+|+||+ ++.. ..++.|.|.+ ||++|+|+||+++..+ ...+.|.++.
T Consensus 277 nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~---~~~~~~~~~~ 328 (335)
T 1k5c_A 277 DVNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGK---AGTIKSDKAK 328 (335)
T ss_dssp EEEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSB---CCCEECTTCE
T ss_pred EEEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCC---CCceEeEEeE
Confidence 99999999 7655 4689999976 9999999999999752 2334555544
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=8.1e-50 Score=413.61 Aligned_cols=301 Identities=16% Similarity=0.179 Sum_probs=252.8
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCC-eeee------------eeecccccceEEEeeC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG-KWLT------------GSFNLTSHFTLFLHKD 115 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G-~Y~~------------~~l~l~sn~~l~~~~g 115 (480)
.+.++||+||||+|| ||+|||+||++|++ .+|++|+||+| +|++ ++|.|+|+++|++++
T Consensus 48 ~~~~~nV~dfGA~gD----dT~AIqkAIdaCs~---~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkSnVtL~LdG- 119 (600)
T 2x6w_A 48 CDPSGNVIQPGPNVD----SRQYLQAAIDYVSS---NGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRSNVNLNIEG- 119 (600)
T ss_dssp BCTTSCBCCCCTTCC----CHHHHHHHHHHHHH---TTCEEEEECTTCEEEECSCCCGGGGGGTEEEECCTTEEEEECS-
T ss_pred CCcEEeeecCCCCcc----CHHHHHHHHHHhhh---cCCCEEEECCCCEEEecccccccccccccceEEcCceEEeeec-
Confidence 456899999999999 99999999999986 78999999999 9999 899999999999975
Q ss_pred cEEEecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEE
Q 011659 116 AVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIM 195 (480)
Q Consensus 116 a~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~ 195 (480)
+|+++.++++|+...... .++.++|.+.+++||+|+|. |+|||+|+.||... .....||+ +.|.
T Consensus 120 -tL~as~d~~~yp~~~~v~----------~~w~slI~~~~~~NItItG~-GtIDGqG~~wW~~~---~~~~~RP~-l~f~ 183 (600)
T 2x6w_A 120 -RIHLSPFFDLKPFQVFVG----------FDNGDPASSGNLENCHIYGH-GVVDFGGYEFGASS---QLRNGVAF-GRSY 183 (600)
T ss_dssp -EEEECGGGTTSCEEEEEC----------CSSSSGGGCCCEEEEEEESS-CEEECTTCCCSSTT---CCEEEEEC-CSEE
T ss_pred -EEEEcCChHHCccccccc----------ccccceEEEecceeEEEecc-eeeeCCcccccccc---ccCCCCCE-EEEe
Confidence 999999999996421000 12345688899999999996 99999999999632 11224677 8899
Q ss_pred eeecEEEEeEEEEeC-CCceEEE---eccccEEEEeEE----EECCCCCCCCCeEecCCCccEEEEecEEeeCCceeee-
Q 011659 196 YSQNIQISNLTLINS-PSWNVHP---VYSSSVIVQGIT----ILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAV- 266 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns-~~~~i~~---~~~~nv~i~~~~----i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai- 266 (480)
+|+ |+|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++
T Consensus 184 ~c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~ 250 (600)
T 2x6w_A 184 NCS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSM 250 (600)
T ss_dssp EEE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEEC
T ss_pred eeE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEe
Confidence 998 999999999 9999999 999999999999 776 6899999 99999999999999999
Q ss_pred cCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEee
Q 011659 267 KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRM 346 (480)
Q Consensus 267 ~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni 346 (480)
|+++ ..++.++ ++..++ +||+|||+..++++||+|+| +||++.+++|.|+||+|+||
T Consensus 251 KSGs----------~~ni~~e--~~~~GH-gGISIGSe~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI 307 (600)
T 2x6w_A 251 SSSF----------ARNIACS--VQLHQH-DTFYRGSTVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENN 307 (600)
T ss_dssp CCTT----------HHHHEEE--EEECSS-SEEEESCEEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESC
T ss_pred cCCC----------cCCeEEE--EEcCCC-CcEEecccccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEE
Confidence 9973 2456666 566554 69999999888999999999 67777788899999999999
Q ss_pred EecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccce-------eEEEeccCC-------CCeeeEEEEeE
Q 011659 347 TMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM-------AARLEGIAG-------DPFTGICISNV 412 (480)
Q Consensus 347 ~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-------~~~i~g~~~-------~~i~~i~~~ni 412 (480)
+|+++..+|.+++.. .....+.|+||+|+||+++.... +..+.+.++ .+|++|+|+|+
T Consensus 308 ~m~nV~~~I~i~q~~--------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~ 379 (600)
T 2x6w_A 308 IAVIYGQFVILGSDV--------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGN 379 (600)
T ss_dssp EEEESSEEEEEEECB--------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESC
T ss_pred EEEccceEEEeCCCC--------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEece
Confidence 999999999888651 12334699999999999987632 356777664 68999999999
Q ss_pred EEEec
Q 011659 413 TIELT 417 (480)
Q Consensus 413 ~~~~~ 417 (480)
++...
T Consensus 380 ~~~~~ 384 (600)
T 2x6w_A 380 SFYAP 384 (600)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99653
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=5.8e-43 Score=368.37 Aligned_cols=309 Identities=15% Similarity=0.166 Sum_probs=246.3
Q ss_pred EEEeecCcCCCCcchhHHHHHHHHHHhhhccc-----------------------CCCcEEEeCCCeeee---eeecccc
Q 011659 53 ASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQS-----------------------EGGSQLFVPPGKWLT---GSFNLTS 106 (480)
Q Consensus 53 ~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~-----------------------~~g~~v~iP~G~Y~~---~~l~l~s 106 (480)
+|...|||++||.+|.+.+|. ++....+... .++++|+||+|+|++ |+|.|+|
T Consensus 143 ~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~s 221 (549)
T 1x0c_A 143 FDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSS 221 (549)
T ss_dssp EGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEECT
T ss_pred ECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEecC
Confidence 444469999999999999988 4443322100 368999999999996 5899999
Q ss_pred cce-EEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCC--
Q 011659 107 HFT-LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGE-- 183 (480)
Q Consensus 107 n~~-l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~-- 183 (480)
+++ |++++||.|+++ ++...+++||+|+|. |+|||+|..||......-
T Consensus 222 ~~~~L~l~~GA~L~gs----------------------------~~~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~ 272 (549)
T 1x0c_A 222 SVTWVYFAPGAYVKGA----------------------------VEFLSTASEVKASGH-GVLSGEQYVWYADPDEGYQK 272 (549)
T ss_dssp TCCEEEECTTEEEESC----------------------------EEECCCSSEEEEESS-CEEECTTSCTTEEGGGTTEE
T ss_pred CCCeEecCCCCEEEEE----------------------------EEEecCceeEEEEee-EEEECCCceecccCcccccc
Confidence 999 999999998752 222338899999997 999999999995321110
Q ss_pred CCcCCCeEEEE------EeeecEEEEeEEEEeCCCceEEEe-cc-cc--EEEEeEEEECCCCCCCCCeEecCCCccEEEE
Q 011659 184 LKYTRPYLIEI------MYSQNIQISNLTLINSPSWNVHPV-YS-SS--VIVQGITILAPVTSPNTDGINPDSCTNTRIE 253 (480)
Q Consensus 184 ~~~~~p~~i~~------~~~~nv~I~~v~i~ns~~~~i~~~-~~-~n--v~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 253 (480)
....||+++.| .+|+|++|+|++++|+|+|++++. .| ++ ++|+++++.++. .+|+|||++. +||+|+
T Consensus 273 ~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~ 349 (549)
T 1x0c_A 273 ASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQ 349 (549)
T ss_dssp CGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEE
T ss_pred cccCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEE
Confidence 12347777777 999999999999999999999965 56 69 999999999854 4689999998 999999
Q ss_pred ecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcce-EEEcccccCceeEEEEEeeEEeCCCc------eE
Q 011659 254 DCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV-IALGSEMSGGIQDVRAEDITAIDSES------GV 326 (480)
Q Consensus 254 n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g-i~igs~~~~~v~nI~v~n~~~~~~~~------Gi 326 (480)
||+|.++||||++++ +||+|+||+|+.+++++ |++|++ .+.++||+|+||+|.++.. |.
T Consensus 350 n~~i~~gDDcIaIks-------------~NI~I~n~~~~~~~g~~~IsiGs~-~~~V~NV~v~n~~i~~s~~~k~~~~g~ 415 (549)
T 1x0c_A 350 DVFYHTDDDGLKMYY-------------SNVTARNIVMWKESVAPVVEFGWT-PRNTENVLFDNVDVIHQAYANAGNNPG 415 (549)
T ss_dssp EEEEEESSCCEECCS-------------SSEEEEEEEEEECSSSCSEECCBS-CCCEEEEEEEEEEEEECCCCSGGGCCC
T ss_pred eeEEeCCCCEEEECC-------------CCEEEEeeEEEcCCCCceEEECCC-CCcEEEEEEEeeEEECccccccccceE
Confidence 999999999999985 89999999999766677 999996 6789999999999998863 55
Q ss_pred EEEe---e--c------CCCCceecEEEEeeEecccc-eeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc---
Q 011659 327 RIKT---A--V------GRGGFVKDVYVRRMTMKTMK-WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT--- 391 (480)
Q Consensus 327 ~i~s---~--~------~~~g~v~nI~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~--- 391 (480)
.|++ + . +.+|.|+||+|+||+|+++. +++.+...+. .+ ...|+||+|+||+++..+
T Consensus 416 iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g-------~p--g~~I~nI~i~NI~i~~~~~~~ 486 (549)
T 1x0c_A 416 IFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI-------NP--IQNLDNISIKNVSIESFEPLS 486 (549)
T ss_dssp SEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE-------CC--SEEEEEEEEEEEEEEEECCGG
T ss_pred EEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC-------CC--CCcCccEEEEEEEEEcccccc
Confidence 5887 2 1 22678999999999999987 7766544321 12 236999999999977654
Q ss_pred ---eeEEEeccCC------CCeeeEEEEeEEEEec
Q 011659 392 ---MAARLEGIAG------DPFTGICISNVTIELT 417 (480)
Q Consensus 392 ---~~~~i~g~~~------~~i~~i~~~ni~~~~~ 417 (480)
.+..+.|.+. .+|++|+|+||+++..
T Consensus 487 ~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 487 INTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp GTCSCEEECCCBBTTTCCBCCEEEEEEEEEEETTE
T ss_pred ccccceEEeCCCccccccceeeeeEEEEeEEEeCe
Confidence 2455666544 7899999999999754
No 13
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=2.2e-40 Score=348.27 Aligned_cols=269 Identities=16% Similarity=0.171 Sum_probs=222.6
Q ss_pred CCCcEEEeCCCeeee-------------eeecccccce-EEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCCCcceee
Q 011659 85 EGGSQLFVPPGKWLT-------------GSFNLTSHFT-LFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSL 150 (480)
Q Consensus 85 ~~g~~v~iP~G~Y~~-------------~~l~l~sn~~-l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 150 (480)
.++++|+||+|+|++ ++|.|+|+++ |++++||+|++ +
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g-----------------------------~ 279 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKG-----------------------------A 279 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEES-----------------------------C
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEecCCCceEEecCCcEEEc-----------------------------c
Confidence 478999999999999 5799999999 99999999874 2
Q ss_pred EEEeceeceEEeCccceEeCCChhhhhhhccC-CCCcCCCeEEEEE------eeecEEEEeEEEEeCCCceEEEeccccE
Q 011659 151 IFGTNLTDVVITGDNGTIDGQGELWWRKFRAG-ELKYTRPYLIEIM------YSQNIQISNLTLINSPSWNVHPVYSSSV 223 (480)
Q Consensus 151 i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~-~~~~~~p~~i~~~------~~~nv~I~~v~i~ns~~~~i~~~~~~nv 223 (480)
+.+.+++||+|+|. |+|||+|+.||...... .....||.++.|. +|+||+|+|++++|+|+|++++..|+++
T Consensus 280 i~~~~~~nv~ItG~-GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV 358 (574)
T 1ogo_X 280 IEYFTKQNFYATGH-GILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGI 358 (574)
T ss_dssp EEECCSSCEEEESS-CEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCE
T ss_pred EEEeCceeEEEEeC-EEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCCh
Confidence 56688999999996 99999999999643221 1122478888888 9999999999999999999999999999
Q ss_pred --EEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcce-EE
Q 011659 224 --IVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV-IA 300 (480)
Q Consensus 224 --~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g-i~ 300 (480)
+|+++++.++. ..++||||+. +||+|+||+|.++||||++++ +||+|+||+++.+++++ |+
T Consensus 359 ~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks-------------~NI~I~nc~i~~g~g~g~Is 422 (574)
T 1ogo_X 359 SSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY-------------SGASVSRATIWKCHNDPIIQ 422 (574)
T ss_dssp EEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS-------------TTCEEEEEEEEECSSSCSEE
T ss_pred hhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC-------------ccEEEEeEEEECCCCCceEE
Confidence 99999998754 3569999998 999999999999999999985 89999999999776667 99
Q ss_pred EcccccCceeEEEEEeeEEeCCCc--------eEEE----------EeecCCCCceecEEEEeeEecccceeEEEEeecC
Q 011659 301 LGSEMSGGIQDVRAEDITAIDSES--------GVRI----------KTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYG 362 (480)
Q Consensus 301 igs~~~~~v~nI~v~n~~~~~~~~--------Gi~i----------~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~ 362 (480)
|||. .+.++||+|+||+|.++.. +..| +...+ .+ | ||+|+||+|+++.+++ |.. +
T Consensus 423 IGS~-~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g-~g-V-NI~f~NI~~~~v~~~i-i~i-~- 495 (574)
T 1ogo_X 423 MGWT-SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSR-KS-I-SMTVSNVVCEGLCPSL-FRI-T- 495 (574)
T ss_dssp CCSS-CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEE-EE-E-EEEEEEEEECSSBCEE-EEE-C-
T ss_pred EcCC-CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCC-ce-E-EEEEEeEEEEceeEee-EEE-C-
Confidence 9995 6799999999999988753 3332 22222 24 8 9999999999998885 432 1
Q ss_pred CCCCCCCCCCCCCeEEeEEEEEeEEec------c-ceeEEEeccCCCCeeeEEEEeEEEEec
Q 011659 363 SHPDNNYDPHALPVIQNINYRDMVAEN------V-TMAARLEGIAGDPFTGICISNVTIELT 417 (480)
Q Consensus 363 ~~~~~~~~~~~~~~i~nIt~~nI~~~~------~-~~~~~i~g~~~~~i~~i~~~ni~~~~~ 417 (480)
| .+.|+||+|+||++++ . ..+..+.|.+ .+|++|+|+||++...
T Consensus 496 --------p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 496 --------P--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp --------C--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred --------C--CCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 1 2379999999999765 2 2345677877 9999999999999653
No 14
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=7.6e-40 Score=340.94 Aligned_cols=303 Identities=17% Similarity=0.218 Sum_probs=231.0
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeee-eeecccccceEEEee--CcEEEecCCCC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHK--DAVLLASQDEK 125 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~-~~l~l~sn~~l~~~~--ga~i~~~~~~~ 125 (480)
++.++||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|+++. .++|+++.+..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-------G-g~V~iP~GtYlis~~l~l~snv~L~g~g~~~t~L~~~~~~p 90 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT-------S-SCEEECSEEEEESSCEEECSSEEEEESCTTTEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc-------C-CEEEECCccEEEeCceEECCCcEEEEeeCCCCEEEeCCCCC
Confidence 456899999999999999999999999993 3 799999999999 899999999999976 46777765432
Q ss_pred CCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeE
Q 011659 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNL 205 (480)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v 205 (480)
.|.. .+..++.+.+.+||+|+| ++|||+|+.||... ......||++|.|.+|+|++|+++
T Consensus 91 ~~~~----------------li~~lI~a~~~~NItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~c~NV~I~gV 150 (609)
T 3gq8_A 91 RGES----------------LMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (609)
T ss_dssp SSCC----------------SEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCCc----------------eeeeeeeecccccEEEEe--eEEECCccccCccc--ccCCCCCccEEEEEeeceEEEEee
Confidence 2210 112455678899999999 59999999554321 123457899999999999999999
Q ss_pred EEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCC------CccEEEEecEE-eeCCceeeecCCCCccCcccC
Q 011659 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS------CTNTRIEDCYI-VSGDDCVAVKSGWDQYGIAYG 278 (480)
Q Consensus 206 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~------s~nV~I~n~~i-~~gdD~iai~sg~~~~g~~~~ 278 (480)
+++|+|.+++.+. ++.. | ||+++++ |+||+|+||+| .++||||++++
T Consensus 151 ti~NSp~~gI~I~-------------~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks---------- 204 (609)
T 3gq8_A 151 EAVDCTLHGIDIT-------------CGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (609)
T ss_dssp EEESCSSCSEEEE-------------CSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCeEEe-------------CCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC----------
Confidence 9999998665544 3321 2 6666666 99999999999 56999999987
Q ss_pred CCceeEEEEEEEEeCCC----cceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEe-eEecccc-
Q 011659 279 MPTKQLIIRRLTCISPF----SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR-MTMKTMK- 352 (480)
Q Consensus 279 ~~~~ni~I~n~~~~~~~----~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~n-i~~~~~~- 352 (480)
++||+|+||+|++++ ++||+||+ +.+||+|+||++.++..|++||++. +++.++||.|.| +.++++.
T Consensus 205 --seNI~I~Nc~~~gp~G~S~~~GIsIGs----gs~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrs 277 (609)
T 3gq8_A 205 --SQYINILNCYSHDPRLTANCNGFEIDD----GSRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (609)
T ss_dssp --CEEEEEESCEEECCSSCSSCCSEEECT----TCEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CeeEEEEeEEEECCCCCCCcccEEccC----CcccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceE
Confidence 899999999997663 47999995 3499999999999999999999875 468999999999 5666653
Q ss_pred eeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc-----------eeEEEec-------------cCC-------
Q 011659 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT-----------MAARLEG-------------IAG------- 401 (480)
Q Consensus 353 ~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-----------~~~~i~g-------------~~~------- 401 (480)
+.++.-..+.. + +|.. ....||+++|+...... .+..+.+ .+.
T Consensus 278 yn~r~iG~~~a--~---dp~s-~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~ 351 (609)
T 3gq8_A 278 YNFRHIGHHAA--T---APQS-VSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETV 351 (609)
T ss_dssp EEEEETTSCST--T---SCCC-SSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEE
T ss_pred ecceEEccccC--C---CCCc-ceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCce
Confidence 55665444321 1 1222 25689999998876541 1222222 222
Q ss_pred ----CCeeeEEEEeEEEEecC
Q 011659 402 ----DPFTGICISNVTIELTN 418 (480)
Q Consensus 402 ----~~i~~i~~~ni~~~~~~ 418 (480)
..+++++|++|.++...
T Consensus 352 ~~~q~~~~~~~l~~~~i~gf~ 372 (609)
T 3gq8_A 352 VSVQFRARNCSLNGVVLTGFS 372 (609)
T ss_dssp EEEETTCEEEEEEEEEEESCT
T ss_pred EEEEEecceeEEcceEEeccc
Confidence 24799999999998753
No 15
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1e-39 Score=335.90 Aligned_cols=301 Identities=17% Similarity=0.198 Sum_probs=227.6
Q ss_pred cccCceeEE-EeecCcCCCCcchhHHHHHHHHHHhhhcccC-CCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCC
Q 011659 46 ISCRAHSAS-LEEFGGVGDGTTSNTKAFKAAIDHLSRFQSE-GGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQD 123 (480)
Q Consensus 46 ~~~~~~~~n-V~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~-~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~ 123 (480)
+..+..+++ |+||||+|||.+|||+|||+||++|++ . ++++|+||+|+|++++|.|+|+++|++++|++|+++.+
T Consensus 15 p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~---~~ggg~V~vP~GtYl~g~I~lks~v~L~l~~GatL~~s~~ 91 (464)
T 1h80_A 15 PTQQDVNYDLVDDFGANGNDTSDDSNALQRAINAISR---KPNGGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWN 91 (464)
T ss_dssp CSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHT---STTCEEEEECSSEEEECSEECCTTEEEEECTTCEEEECCC
T ss_pred CCCCcceeeehhccCcCCCCCchhHHHHHHHHHHHhh---ccCCcEEEECCCeEEEeeEeccCceEEEEcCCcEEEeccC
Confidence 334567888 999999999999999999999999975 5 78999999999999999999999999999999999864
Q ss_pred --CCCCCCCCCCCCCCccccCCCCcceeeE--EEeceeceEEeCccc---eEeCCChhhhhhhccCCCCcCCCeEEEEEe
Q 011659 124 --EKEWPVIEPLPSYGRGRDTEGGRYSSLI--FGTNLTDVVITGDNG---TIDGQGELWWRKFRAGELKYTRPYLIEIMY 196 (480)
Q Consensus 124 --~~~~~~~~~~~~~~~g~~~~~~~~~~~i--~~~~~~nv~I~G~~G---~idG~g~~~w~~~~~~~~~~~~p~~i~~~~ 196 (480)
...|+ .+. .+.+++||+|+|. | +|||+|+. ..+|+++.|.+
T Consensus 92 td~~~y~--------------------~~~~~~~~~~~nItI~G~-Gg~~~iDG~G~~-----------~~rp~~i~~~~ 139 (464)
T 1h80_A 92 GDGKNHR--------------------LFEVGVNNIVRNFSFQGL-GNGFLVDFKDSR-----------DKNLAVFKLGD 139 (464)
T ss_dssp TTCSCEE--------------------EEEESSSSCEEEEEEEEC-TTCEEEECTTCS-----------CCBEEEEEECS
T ss_pred CCcccCC--------------------ceEeecccCccceEEECc-CcceEEeCCCCC-----------CCCceEEEEEe
Confidence 33332 111 1268899999996 8 99998852 35788999999
Q ss_pred eecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcc
Q 011659 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276 (480)
Q Consensus 197 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~ 276 (480)
|+|++|+|++++| .|.++ .|.++.+ .|+|||++ .|+||+|+||+|.++||++...
T Consensus 140 ~~Nv~I~gIti~n--~w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~--------- 194 (464)
T 1h80_A 140 VRNYKISNFTIDD--NKTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLI--------- 194 (464)
T ss_dssp EEEEEEEEEEEEC--CSCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEE---------
T ss_pred eccEEEeeeEEec--cceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEec---------
Confidence 9999999999999 45533 3433322 26899999 8999999999999999987521
Q ss_pred cCCCceeEEEEEEEEeCCCcceEEEccc-------ccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEec
Q 011659 277 YGMPTKQLIIRRLTCISPFSAVIALGSE-------MSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349 (480)
Q Consensus 277 ~~~~~~ni~I~n~~~~~~~~~gi~igs~-------~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~ 349 (480)
...+++||+|+||+|.+ . +||+|.+. ..+.++||+|+||+|.+...+|.|++. .+.++||+|+||+++
T Consensus 195 ~~~~~~NV~V~n~~~~g-g-~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t 269 (464)
T 1h80_A 195 QTYGADNILFRNLHSEG-G-IALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSV 269 (464)
T ss_dssp EESEEEEEEEEEEEEES-S-EEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEE
T ss_pred ccCCEeEEEEEeeEEEC-C-CEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEE
Confidence 11249999999999998 4 79998765 346799999999999999999999954 367999999999999
Q ss_pred ccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeE------Eec---------c-ceeEEEecc-------------C
Q 011659 350 TMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMV------AEN---------V-TMAARLEGI-------------A 400 (480)
Q Consensus 350 ~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~------~~~---------~-~~~~~i~g~-------------~ 400 (480)
++..++.|++.|+..- ++... ...+.+|.|-. ++- . ..++.|.+. +
T Consensus 270 ~~~~aI~i~q~y~~~f----d~~~~-~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~ 344 (464)
T 1h80_A 270 SCGSAVRSDSGFVELF----SPTDE-VHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIE 344 (464)
T ss_dssp SSSCSEEECCCCCEEC----C----------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCC
T ss_pred ccceeEEEecCccccc----Ccccc-ccccceeccccccccccCceeEEEeccCCcccCceEEccccceecccccccccc
Confidence 9999999999887431 12211 34455555433 111 0 123444443 5
Q ss_pred CCCeeeEEEEeEEEEe
Q 011659 401 GDPFTGICISNVTIEL 416 (480)
Q Consensus 401 ~~~i~~i~~~ni~~~~ 416 (480)
...+++++++||+++.
T Consensus 345 ~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 345 PGSFGTVKVFDVTARF 360 (464)
T ss_dssp CCBCSSEEEEEEEEEC
T ss_pred CCceEEEEEEEEEecc
Confidence 5567888888888876
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.6e-39 Score=343.12 Aligned_cols=303 Identities=17% Similarity=0.228 Sum_probs=230.3
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeee-eeecccccceEEEee--CcEEEecCCCC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT-GSFNLTSHFTLFLHK--DAVLLASQDEK 125 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~-~~l~l~sn~~l~~~~--ga~i~~~~~~~ 125 (480)
++.++||+||||+|||++|||+|||+||++ + ++|+||+|+|++ ++|.|+++++|.++. .++|+++.+..
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-------G-g~V~IPaGtYlisg~I~L~snv~L~Geg~~~t~Lk~~~d~p 90 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES-------G-FPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVG 90 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT-------T-SCEEECSEEEEESSCEEECSSCEEEEEEEEEEEEEECTTCC
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc-------C-CEEEECCccEEEEeEEEECCCcEEEEecCCCCEEEeCCCCC
Confidence 456899999999999999999999999993 3 799999999999 899999999999875 36777765432
Q ss_pred CCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeE
Q 011659 126 EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNL 205 (480)
Q Consensus 126 ~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v 205 (480)
.|.. .+..|+.+.+++||+|+| ++|||+|+.||... ......||.+|.|.+|+|++|+++
T Consensus 91 ~~~~----------------li~~lI~a~gveNItItG--~TIDGNG~~~g~~~--~~~g~~RP~lI~f~~ckNV~I~gV 150 (772)
T 3gqn_A 91 RGES----------------LMYNENVTTGNENIFLSS--FTLDGNNKRLGQGI--SGIGGSRESNLSIRACHNVYIRDI 150 (772)
T ss_dssp SSCC----------------SEEESCTTTCCEEEEEEE--EEEECCGGGGCSSC--CCSSTTTTCSEEEESCEEEEEEEE
T ss_pred CCCc----------------eeeeeeeccCceeEEEEe--eEEeCCccccCccc--ccCCCCCccEEEEEeeceEEEEeE
Confidence 2210 123456678899999999 59999999444321 123357899999999999999999
Q ss_pred EEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCC------CccEEEEecEE-eeCCceeeecCCCCccCcccC
Q 011659 206 TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS------CTNTRIEDCYI-VSGDDCVAVKSGWDQYGIAYG 278 (480)
Q Consensus 206 ~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~------s~nV~I~n~~i-~~gdD~iai~sg~~~~g~~~~ 278 (480)
+++|+|.+++. |.++.. | ||+++++ |+||+|+||+| .++||||++++
T Consensus 151 ti~NSp~~gI~-------------I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks---------- 204 (772)
T 3gqn_A 151 EAVDCTLHGID-------------ITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH---------- 204 (772)
T ss_dssp EEESCSSCSEE-------------EECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS----------
T ss_pred EEEeCCCCCEE-------------EeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC----------
Confidence 99999986554 444432 2 6666666 99999999999 55999999987
Q ss_pred CCceeEEEEEEEEeCCC----cceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEe-eEecccc-
Q 011659 279 MPTKQLIIRRLTCISPF----SAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRR-MTMKTMK- 352 (480)
Q Consensus 279 ~~~~ni~I~n~~~~~~~----~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~n-i~~~~~~- 352 (480)
++||+|+||+|.+++ ++||+||+ +.+||+|+||++.++.+|++||++. +++.++||+|.+ +.++++.
T Consensus 205 --SeNI~I~Nc~c~gphG~S~~~GIsIGs----gs~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dvrs 277 (772)
T 3gqn_A 205 --SQYINILNCYSHDPRLTANCNGFEIDD----GSRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRS 277 (772)
T ss_dssp --CEEEEEESCEEECCSSSSSCCSEEECT----TCEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCSEE
T ss_pred --CceEEEEeEEEECCCCCCCcccEEecC----CcccEEEEceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccCeE
Confidence 899999999997653 47999995 3499999999999999999999874 568899999985 8887753
Q ss_pred eeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc-----------eeEEEec-------------cCC-------
Q 011659 353 WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT-----------MAARLEG-------------IAG------- 401 (480)
Q Consensus 353 ~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-----------~~~~i~g-------------~~~------- 401 (480)
+.++.-+++.. . +|... ...||.++|+...... .+..+.+ .+.
T Consensus 278 ynir~iG~h~a--~---dp~s~-~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~ 351 (772)
T 3gqn_A 278 YNFRHIGHHAA--T---APQSV-SAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETV 351 (772)
T ss_dssp EEECCTTSCSS--S---SCCCS-SCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEE
T ss_pred ecceEEccccC--C---CCCCc-cCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCce
Confidence 44443322211 1 12222 6789999998876441 1222222 222
Q ss_pred ----CCeeeEEEEeEEEEecC
Q 011659 402 ----DPFTGICISNVTIELTN 418 (480)
Q Consensus 402 ----~~i~~i~~~ni~~~~~~ 418 (480)
..+++++|+||.++...
T Consensus 352 i~~q~~~~~~~ln~i~i~gf~ 372 (772)
T 3gqn_A 352 VSVQFRARNCSLNGVVLTGFS 372 (772)
T ss_dssp EEEETTCEEEEEEEEEEESCT
T ss_pred EEEEEecceeEEcceEEeccc
Confidence 24899999999998753
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=100.00 E-value=3.8e-35 Score=288.57 Aligned_cols=229 Identities=20% Similarity=0.326 Sum_probs=184.8
Q ss_pred CceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCC----eeeee-eecccccceEEEeeCcEEEecCC
Q 011659 49 RAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPG----KWLTG-SFNLTSHFTLFLHKDAVLLASQD 123 (480)
Q Consensus 49 ~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G----~Y~~~-~l~l~sn~~l~~~~ga~i~~~~~ 123 (480)
.+.++||+||||+|||++|||+|||+||++|++. .+|++|+||+| +|+++ ++.|+++++|+++.+++++++..
T Consensus 48 ~s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~--~GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~ 125 (514)
T 2vbk_A 48 NKEAISILDFGVIDDGVTDNYQAIQNAIDAVASL--PSGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKS 125 (514)
T ss_dssp HTTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTS--TTCEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECT
T ss_pred CCcEEEeeccCcCCCCCcccHHHHHHHHHHHhhc--CCCeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeeccc
Confidence 3578999999999999999999999999998751 37899999999 89885 89999999999999998876532
Q ss_pred CCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEE
Q 011659 124 EKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQIS 203 (480)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~ 203 (480)
. . .|. +....|.+++.+.+++||+|+|. |+|||++..|+... ...+++..+ .+++|.|+
T Consensus 126 ~----I--------~Gt-Iia~~y~s~I~~~~VeNIaITG~-GTIDG~g~n~t~e~----~~~Rq~~~~---~fdnV~Vn 184 (514)
T 2vbk_A 126 G----L--------TGS-VLRLSYDSDTIGRYLRNIRVTGN-NTCNGIDTNITAED----SVIRQVYGW---VFDNVMVN 184 (514)
T ss_dssp T----C--------CSE-EEEECCCSCCSCEEEESCEEECC-SSSEEEEESCCTTC----SSCCCEESE---EEESCEEE
T ss_pred c----c--------ccc-EEeccCCccccccCceEEEEECC-CeEeCCCCCccccc----eeeeccceE---EeeeEEEE
Confidence 1 0 010 11112456777889999999996 99999876552210 011222233 36799999
Q ss_pred eEEE--EeCCCceEEEeccccEEEE-eEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCC
Q 011659 204 NLTL--INSPSWNVHPVYSSSVIVQ-GITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280 (480)
Q Consensus 204 ~v~i--~ns~~~~i~~~~~~nv~i~-~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~ 280 (480)
+++. .+++.|++++..|++++++ ++++. ++|+||.|.||+|..|||||++|+|.-..+..+.+|
T Consensus 185 ~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~ 251 (514)
T 2vbk_A 185 EVETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWS 251 (514)
T ss_dssp EEEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTT
T ss_pred eEEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCc
Confidence 9964 4788999999999999988 66654 389999999999999999999999987778888999
Q ss_pred ceeEEEEEEEEeCCCcceEEEccc-ccCceeE-EEEEeeEEeCCC
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSE-MSGGIQD-VRAEDITAIDSE 323 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~-~~~~v~n-I~v~n~~~~~~~ 323 (480)
++|+. + .++.|||| +.++++| ++|++|.|.+++
T Consensus 252 se~~~---------h-gav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 252 SEAVR---------S-EAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp SSCBC---------C-EEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred chhcc---------c-ccEEECchhhcccccccEEEEeeeccCCc
Confidence 99998 4 59999999 8899999 999999998873
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.98 E-value=7.9e-31 Score=267.20 Aligned_cols=183 Identities=18% Similarity=0.362 Sum_probs=127.9
Q ss_pred eEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeee--------eeecccccceEEEe-eC-cEEEec
Q 011659 52 SASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLT--------GSFNLTSHFTLFLH-KD-AVLLAS 121 (480)
Q Consensus 52 ~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~--------~~l~l~sn~~l~~~-~g-a~i~~~ 121 (480)
++||+||||+|||++|||+|||+||++|++ .++++|+||+|+|++ ++|.|+++++|.++ ++ ++|++.
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~---~gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA---AGGGTVYLPAGEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH---TTSEEEEECSEEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEEC
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh---cCCCEEEECCeEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEec
Confidence 689999999999999999999999999986 678999999999998 48999999999998 45 455666
Q ss_pred CCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCcc----ceEeCCChhhhhhhccCCCCcCCCeEEEEEee
Q 011659 122 QDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDN----GTIDGQGELWWRKFRAGELKYTRPYLIEIMYS 197 (480)
Q Consensus 122 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~----G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~ 197 (480)
.+...++...-...++. .. ...+++|++|.|.. |++|| ||...... .+.+|
T Consensus 79 ~~~~~~~~~~~~~~~g~----------~~-~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~~ 133 (377)
T 2pyg_A 79 DGSDQKITGMVRSAYGE----------ET-SNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGAD 133 (377)
T ss_dssp TTCBSCEEEEEECCTTS----------CC-EEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCCE
T ss_pred CCCccCccceEeccCCC----------cc-eEEEEEEEEEECCCccCCccccc----eecccCcc----------ccccc
Confidence 55444321000000110 01 23468999999941 78887 88642211 12469
Q ss_pred ecEEEEeEEEEeCCCceEEEeccc-cEEEEeEEEECCCCCCCCCeEecCCCccEEEEecE-EeeCCceeee
Q 011659 198 QNIQISNLTLINSPSWNVHPVYSS-SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCY-IVSGDDCVAV 266 (480)
Q Consensus 198 ~nv~I~~v~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~-i~~gdD~iai 266 (480)
++++|+++++++++.|++++..|. +++++|+.+.. ...|||.+..|++++|++|. +...+|+|.+
T Consensus 134 ~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~ 200 (377)
T 2pyg_A 134 RDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNV 200 (377)
T ss_dssp EEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEE
T ss_pred cceEEEeEEEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEE
Confidence 999999999999999999998876 67888777753 23455555555555555552 2334444444
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.91 E-value=2e-23 Score=220.82 Aligned_cols=247 Identities=16% Similarity=0.165 Sum_probs=182.3
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcc------cCCCcEEEeCCCeeeee-eecccccceEEEeeC--cEE
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQ------SEGGSQLFVPPGKWLTG-SFNLTSHFTLFLHKD--AVL 118 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~------~~~g~~v~iP~G~Y~~~-~l~l~sn~~l~~~~g--a~i 118 (480)
..+..+||+||||+|||++|||+|||+||+++.+|. +..+++|+||+|+|++. +|.+++++.|..+.. .+|
T Consensus 45 ~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvI 124 (758)
T 3eqn_A 45 GYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTL 124 (758)
T ss_dssp TCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEE
T ss_pred CCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEccCCeEEEecCCCCCeE
Confidence 356688999999999999999999999999987631 01126999999999875 899999999988765 477
Q ss_pred EecCCCCCCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeee
Q 011659 119 LASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQ 198 (480)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~ 198 (480)
++...... ..+ |.+ ...+++|..||... ...+..++
T Consensus 125 ka~~~F~G---------------------~~l----------i~~--d~y~~~G~~w~~~~-----------~~F~r~ir 160 (758)
T 3eqn_A 125 LAAPNFSG---------------------IAL----------IDA--DPYLAGGAQYYVNQ-----------NNFFRSVR 160 (758)
T ss_dssp EECTTCCS---------------------SCS----------EES--SCBCGGGCBSSCGG-----------GCCCEEEE
T ss_pred ecCCCCCC---------------------cce----------eec--cccCCCCccccccc-----------cceeeeec
Confidence 76542211 012 233 34456677787531 23455666
Q ss_pred cEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCC-CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCccc
Q 011659 199 NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTS-PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAY 277 (480)
Q Consensus 199 nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~-~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~ 277 (480)
|+.|+ ++..++...+|++..|++..++||.|..+..+ ...+||+++.++.+.|+|+.|..|+=++.+.
T Consensus 161 NlviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~g---------- 229 (758)
T 3eqn_A 161 NFVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFG---------- 229 (758)
T ss_dssp EEEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEE----------
T ss_pred ceEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcC----------
Confidence 77776 55555666899999999999999999998755 3489999999999999999999998777763
Q ss_pred CCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecC---CCCceecEEEEeeEeccccee
Q 011659 278 GMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVG---RGGFVKDVYVRRMTMKTMKWA 354 (480)
Q Consensus 278 ~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~---~~g~v~nI~~~ni~~~~~~~~ 354 (480)
.+..+++|.+|.+.. .+|.+.... ..++.+++|.++..||.|..... ....+--|.+.|.+++++..+
T Consensus 230 ---nQQfT~rnltF~~~~-taI~~~w~w-----gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~ 300 (758)
T 3eqn_A 230 ---NQQFTVRNLTFNNAN-TAINAIWNW-----GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTF 300 (758)
T ss_dssp ---CSCCEEEEEEEESCS-EEEEEEEBS-----CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEE
T ss_pred ---CcceEEeccEEeChH-HHHhhhcCc-----eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccce
Confidence 367788999998876 677776433 34555666666667888865321 123577899999999998866
Q ss_pred EEEE
Q 011659 355 FWIT 358 (480)
Q Consensus 355 i~i~ 358 (480)
|...
T Consensus 301 i~t~ 304 (758)
T 3eqn_A 301 VRWS 304 (758)
T ss_dssp EEES
T ss_pred EEec
Confidence 6543
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.89 E-value=3e-22 Score=206.31 Aligned_cols=227 Identities=17% Similarity=0.223 Sum_probs=182.9
Q ss_pred eeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeC--CCceEEEeccccEEE
Q 011659 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS--PSWNVHPVYSSSVIV 225 (480)
Q Consensus 148 ~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns--~~~~i~~~~~~nv~i 225 (480)
..+|.+.+++|++|.|- ++.- .+.| .+++..|+|++|++++|.++ ..+++++..|+||+|
T Consensus 190 P~~i~~~~~~nv~i~gi--ti~n--sp~~--------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 190 PSFVQFYRCRNVLVEGV--KIIN--SPMW--------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLI 251 (448)
T ss_dssp CCSEEEESCEEEEEESC--EEES--CSSC--------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEE
T ss_pred ceEEEEEcccceEEEee--EEEe--CCCc--------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEE
Confidence 45899999999999994 4421 1122 49999999999999999985 357899999999999
Q ss_pred EeEEEECCCCCCCCCeEecCC------------CccEEEEecEE--eeCCceeeecCCCCccCcccCCCceeEEEEEEEE
Q 011659 226 QGITILAPVTSPNTDGINPDS------------CTNTRIEDCYI--VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTC 291 (480)
Q Consensus 226 ~~~~i~~~~~~~n~DGI~~~~------------s~nV~I~n~~i--~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~ 291 (480)
+|++|.+. .|+|.+.+ |+||+|+||.+ ..++.||++.+.. ....+||+|+||++
T Consensus 252 ~n~~i~~g-----DDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~-------~~~v~nV~v~n~~~ 319 (448)
T 3jur_A 252 EKCRFDTG-----DDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM-------SGGVRNVVARNNVY 319 (448)
T ss_dssp ESCEEEES-----SEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC-------TTCEEEEEEESCEE
T ss_pred EeeEEEeC-----CCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc-------cCcEEEEEEEEEEE
Confidence 99999974 45555542 79999999999 4466799998862 23489999999999
Q ss_pred eCCCcceEEEccc--ccCceeEEEEEeeEEeCCCceE-EEEeecC-----CCCceecEEEEeeEecccceeEEEEeecCC
Q 011659 292 ISPFSAVIALGSE--MSGGIQDVRAEDITAIDSESGV-RIKTAVG-----RGGFVKDVYVRRMTMKTMKWAFWITGSYGS 363 (480)
Q Consensus 292 ~~~~~~gi~igs~--~~~~v~nI~v~n~~~~~~~~Gi-~i~s~~~-----~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~ 363 (480)
.+.. +|++|++. ..+.++||+|+|++|.+...++ .|+.... ..+.|+||+|+||+.++...++.|...
T Consensus 320 ~~t~-~GirIKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~--- 395 (448)
T 3jur_A 320 MNVE-RALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL--- 395 (448)
T ss_dssp ESCS-EEEEEECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB---
T ss_pred eccc-ceEEEEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC---
Confidence 9887 89999984 3567999999999999998887 8877432 246899999999999998888888632
Q ss_pred CCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEec----cCCCCeeeEEEEeEEEEec
Q 011659 364 HPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG----IAGDPFTGICISNVTIELT 417 (480)
Q Consensus 364 ~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g----~~~~~i~~i~~~ni~~~~~ 417 (480)
+. .+++||+|+||+++..+.+..+.. .....+++++|+||++.+.
T Consensus 396 -------~~--~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 396 -------EN--DYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp -------TT--BCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred -------CC--CCEeeEEEEEEEEEccccceeEeccccccccceecccEEEEEEEcCE
Confidence 22 279999999999998876666653 3445699999999999863
No 21
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.88 E-value=3.2e-21 Score=193.82 Aligned_cols=211 Identities=16% Similarity=0.192 Sum_probs=163.2
Q ss_pred EEEEEeeecEEEEe---EEEEeCC--Cc------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEE
Q 011659 191 LIEIMYSQNIQISN---LTLINSP--SW------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE 253 (480)
Q Consensus 191 ~i~~~~~~nv~I~~---v~i~ns~--~~------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~ 253 (480)
++.+ +.+||+|++ -+|.... .| .+.+..|+|++|+++++.+++ ..+|++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 4666 559999999 4554332 23 488999999999999999865 2459999 9999999
Q ss_pred ecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeec
Q 011659 254 DCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAV 332 (480)
Q Consensus 254 n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~ 332 (480)
|++|.+ .+|+. .+.+.+|.... .++||+|+||++.+++ ++|+|++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~---~~~NtDGidi~-~s~nV~I~n~~i~~gD-DcIaiksg-----~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQ---GGHNTDAFDVG-NSVGVNIIKPWVHNQD-DCLAVNSG-----ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTT---TCCSCCSEEEC-SCEEEEEESCEEECSS-CSEEESSE-----EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccc---cCCCCCceeec-CcceEEEEeeEEecCC-CEEEEeCC-----eEEEEEEEEEeCC-ceeEEeecc
Confidence 999997 34431 12233444332 3899999999999988 89999973 8999999999875 799999963
Q ss_pred -CCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc-eeEEEecc---------C-
Q 011659 333 -GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT-MAARLEGI---------A- 400 (480)
Q Consensus 333 -~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-~~~~i~g~---------~- 400 (480)
...+.|+||+|+|+++.+..++++|+... .+.+.++||+|+||++.+.. .++.|... +
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTIS----------GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeC----------CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 24589999999999999999999999742 22358999999999999885 68877531 2
Q ss_pred -CCCeeeEEEEeEEEEecCCCCccceeEe
Q 011659 401 -GDPFTGICISNVTIELTNKPKKLQWNCT 428 (480)
Q Consensus 401 -~~~i~~i~~~ni~~~~~~~~~~~~~~c~ 428 (480)
..+++||+|+||+.+.+.+.....+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 2479999999999998632334445553
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.88 E-value=7.6e-21 Score=189.81 Aligned_cols=203 Identities=14% Similarity=0.227 Sum_probs=163.0
Q ss_pred EEEEEeeecEEEEeE---EEEeCC--Cc-------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEE
Q 011659 191 LIEIMYSQNIQISNL---TLINSP--SW-------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I 252 (480)
++.+.. +||+|++. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|+||+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 466644 99999997 665432 22 488899999999999999864 46799999999999
Q ss_pred EecEEeeC---------CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC
Q 011659 253 EDCYIVSG---------DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 253 ~n~~i~~g---------dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~ 323 (480)
+|++|.+. .|+|.+.+ ++||+|+||++...+ +||+|++. +||+|+||++.+.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~gD-DcIaiksg-----~nI~i~n~~~~~g- 201 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT------------STYVTISGATVYNQD-DCVAVNSG-----ENIYFSGGYCSGG- 201 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES------------CEEEEEESCEEECSS-CSEEESSE-----EEEEEESCEEESS-
T ss_pred eeEEEECCccccccCCCCCcEEecC------------CceEEEEeeEEEcCC-CeEEEeCC-----eEEEEEeEEEECC-
Confidence 99999863 34455543 899999999999887 89999973 8999999999875
Q ss_pred ceEEEEeecC-CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccce-eEEEecc--
Q 011659 324 SGVRIKTAVG-RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM-AARLEGI-- 399 (480)
Q Consensus 324 ~Gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~g~-- 399 (480)
+|+.|.+... ..+.|+||+|+|++|.+..++++|+... .+.+.++||+|+||++.+... |+.|...
T Consensus 202 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 271 (339)
T 1ia5_A 202 HGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI----------DTTGSVSDVTYKDITLTSIAKYGIVVQQNYG 271 (339)
T ss_dssp SCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEET
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC----------CCCcEEEeeEEEEEEEECcccccEEEEccCC
Confidence 7999998632 3478999999999999999999999642 223689999999999998864 8877642
Q ss_pred -----C--CCCeeeEEEEeEEEEecCCCCccceeE
Q 011659 400 -----A--GDPFTGICISNVTIELTNKPKKLQWNC 427 (480)
Q Consensus 400 -----~--~~~i~~i~~~ni~~~~~~~~~~~~~~c 427 (480)
+ ..+++||+|+||+.+.+.+.....+.|
T Consensus 272 ~~~~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 272 DTSSTPTTGVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp CTTSCCCSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCCCCcCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 2 357999999999999863233445555
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.88 E-value=1.3e-20 Score=188.12 Aligned_cols=203 Identities=19% Similarity=0.234 Sum_probs=162.4
Q ss_pred EEEEEeeecEEEEeE---EEEeCC--Cc-------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEE
Q 011659 191 LIEIMYSQNIQISNL---TLINSP--SW-------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I 252 (480)
++.+.. +||+|++. +|.... .| .+.+..|+|++|+++++.+++ .++|++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 466654 99999997 664432 23 488899999999999999864 46799999999999
Q ss_pred EecEEeeC---------CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC
Q 011659 253 EDCYIVSG---------DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 253 ~n~~i~~g---------dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~ 323 (480)
+|++|.+. .|+|.+.+ ++||+|+||++..++ +||+|++. +||+|+||++.+.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~------------s~nV~I~n~~i~~gD-Dciaiksg-----~nI~i~n~~~~~g- 197 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS------------STGVYISGANVKNQD-DCLAINSG-----TNITFTGGTCSGG- 197 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES------------CEEEEEESCEEECSS-CSEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEECCccccccCCCCCcEEEcC------------cceEEEEecEEecCC-CEEEEcCC-----ccEEEEeEEEECC-
Confidence 99999863 34455443 899999999999887 89999973 8999999999886
Q ss_pred ceEEEEeecC-CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccce-eEEEecc--
Q 011659 324 SGVRIKTAVG-RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM-AARLEGI-- 399 (480)
Q Consensus 324 ~Gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~g~-- 399 (480)
+|+.|++... ..+.|+||+|+|++|.+..++++|+... .+.+.++||+|+||++.+... ++.|...
T Consensus 198 hGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 267 (339)
T 2iq7_A 198 HGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVS----------GATGSVSGVTYSGITLSNIAKYGIVIEQDYE 267 (339)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC----------CCCeEEEEEEEEeEEccCcccccEEEEeecC
Confidence 6999998632 3478999999999999999999999742 223589999999999998864 8776531
Q ss_pred -------C--CCCeeeEEEEeEEEEecCCCCccceeE
Q 011659 400 -------A--GDPFTGICISNVTIELTNKPKKLQWNC 427 (480)
Q Consensus 400 -------~--~~~i~~i~~~ni~~~~~~~~~~~~~~c 427 (480)
+ ..+++||+|+||+.+.+.+.....+.|
T Consensus 268 ~~~~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 268 NGSPTGTPTNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 2 257999999999999864233445555
No 24
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=3e-20 Score=185.33 Aligned_cols=202 Identities=19% Similarity=0.247 Sum_probs=161.0
Q ss_pred EEEEEeeecEEEEeE---EEEeCC--Cc-------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEE
Q 011659 191 LIEIMYSQNIQISNL---TLINSP--SW-------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRI 252 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v---~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I 252 (480)
++.+ ..+||+|++. +|.... .| .+.+..|+|++|+++++.+++ ..+|++. |++|+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 4555 4599999997 564332 23 488899999999999999865 3469999 999999
Q ss_pred EecEEeeC---------CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC
Q 011659 253 EDCYIVSG---------DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 253 ~n~~i~~g---------dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~ 323 (480)
+|++|.+. .|+|.+.+ ++||+|+||++.+++ +||+|++. +||+|+||++.+.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~------------s~nV~I~n~~i~~gD-Dciaiksg-----~nI~i~n~~~~~g- 196 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE------------STGVYISGATVKNQD-DCIAINSG-----ESISFTGGTCSGG- 196 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS------------CEEEEEESCEEESSS-EEEEESSE-----EEEEEESCEEESS-
T ss_pred EEEEEECCCcccccCCCCCcEEecC------------CCeEEEEeCEEEcCC-CEEEEeCC-----eEEEEEeEEEECC-
Confidence 99999873 45555544 899999999999888 89999973 8999999999875
Q ss_pred ceEEEEeecC-CCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccce-eEEEec---
Q 011659 324 SGVRIKTAVG-RGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTM-AARLEG--- 398 (480)
Q Consensus 324 ~Gi~i~s~~~-~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~-~~~i~g--- 398 (480)
+|+.|.|... ..+.|+||+|+|+++.+..++++|+... .+.+.++||+|+||++.+... |+.|..
T Consensus 197 hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 266 (336)
T 1nhc_A 197 HGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIY----------KETGDVSEITYSNIQLSGITDYGIVIEQDYE 266 (336)
T ss_dssp SEEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEE
T ss_pred cCceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEEC----------CCCCEEeeeEEeeEEeeccccccEEEEeecC
Confidence 7999999643 3478999999999999999999999742 223589999999999999864 877642
Q ss_pred ------cC--CCCeeeEEEEeEEEEecCCCCccceeE
Q 011659 399 ------IA--GDPFTGICISNVTIELTNKPKKLQWNC 427 (480)
Q Consensus 399 ------~~--~~~i~~i~~~ni~~~~~~~~~~~~~~c 427 (480)
.+ ..+++||+|+||+.+.+.+.....+.|
T Consensus 267 ~~~~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 267 NGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp TTEECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCCCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 12 357999999999999863233445555
No 25
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.86 E-value=3.2e-20 Score=190.41 Aligned_cols=173 Identities=13% Similarity=0.167 Sum_probs=144.4
Q ss_pred eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC
Q 011659 214 NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS 293 (480)
Q Consensus 214 ~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~ 293 (480)
.+.+..|+|++|+++++.+++ ..+|++..|+||+|+|++|.++|. .+.+|..... +||+|+||++.+
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp----~~~i~i~~~~nv~I~n~~I~~~d~-------~ntDGidi~~--~nV~I~n~~i~~ 195 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAP----AFHFTMDTCSDGEVYNMAIRGGNE-------GGLDGIDVWG--SNIWVHDVEVTN 195 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCS----SCSEEEEEEEEEEEEEEEEECCSS-------TTCCSEEEEE--EEEEEEEEEEES
T ss_pred EEEEcccceEEEECeEEECCC----ceEEEEeCcCCEEEEeEEEECCCC-------CCCccEeecC--CeEEEEeeEEeC
Confidence 588899999999999999854 357999999999999999998431 1233433333 899999999998
Q ss_pred CCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCC
Q 011659 294 PFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHA 373 (480)
Q Consensus 294 ~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~ 373 (480)
++ +||+|++ +.+||+|+||++.+. +|++|++.. .++.|+||+|+|++|.+..++++|+.. . .
T Consensus 196 gD-D~Iai~s----~~~nI~I~n~~~~~~-~GisIGS~g-~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~--------g-- 257 (422)
T 1rmg_A 196 KD-ECVTVKS----PANNILVESIYCNWS-GGCAMGSLG-ADTDVTDIVYRNVYTWSSNQMYMIKSN-G--------G-- 257 (422)
T ss_dssp SS-EEEEEEE----EEEEEEEEEEEEESS-SEEEEEEEC-TTEEEEEEEEEEEEEESSSCSEEEEEB-B--------C--
T ss_pred CC-CeEEeCC----CCcCEEEEeEEEcCC-cceeecccC-CCCcEEEEEEEeEEEeccceEEEEEec-C--------C--
Confidence 88 8999997 689999999999776 799999974 347899999999999999999999962 1 1
Q ss_pred CCeEEeEEEEEeEEeccceeEEEecc---------CCCCeeeEEEEeEEEEec
Q 011659 374 LPVIQNINYRDMVAENVTMAARLEGI---------AGDPFTGICISNVTIELT 417 (480)
Q Consensus 374 ~~~i~nIt~~nI~~~~~~~~~~i~g~---------~~~~i~~i~~~ni~~~~~ 417 (480)
.+.++||+|+||++.+.+.++.|... ...+++||+|+||+.+..
T Consensus 258 ~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~ 310 (422)
T 1rmg_A 258 SGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEA 310 (422)
T ss_dssp CEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEES
T ss_pred CcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEec
Confidence 14899999999999998888888642 345799999999999985
No 26
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.86 E-value=1.5e-20 Score=187.02 Aligned_cols=209 Identities=14% Similarity=0.248 Sum_probs=161.3
Q ss_pred EEEEEeeecEEEEeE--EEEeCC--Cc-------------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCcc-EEE
Q 011659 191 LIEIMYSQNIQISNL--TLINSP--SW-------------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTN-TRI 252 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v--~i~ns~--~~-------------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~n-V~I 252 (480)
++.+. .+|++|.+- +|.... .| .+.+..|+ ++|+++++.+++ ..++++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 46665 699999993 553221 12 37788999 999999999965 35699999999 999
Q ss_pred EecEEeeC-CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEee
Q 011659 253 EDCYIVSG-DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA 331 (480)
Q Consensus 253 ~n~~i~~g-dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~ 331 (480)
+|++|.+. +|+.. ...+.+|... .++||+|+||++.+++ ++|+|++. +||+|+||++.+. +|+.|++.
T Consensus 134 ~~v~I~~~~~d~~~--~~~NtDGidi--~s~nV~I~n~~i~~gD-DcIaiksg-----~nI~i~n~~~~~g-hGisIGS~ 202 (335)
T 1k5c_A 134 DGITVDDFAGDTKN--LGHNTDGFDV--SANNVTIQNCIVKNQD-DCIAINDG-----NNIRFENNQCSGG-HGISIGSI 202 (335)
T ss_dssp ESCEEECGGGGGGG--CCCSCCSEEE--ECSSEEEESCEEESSS-CSEEEEEE-----EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCCCcccc--cCCCCCeEcc--cCCeEEEEeeEEEcCC-CEEEeeCC-----eeEEEEEEEEECC-ccCeEeec
Confidence 99999984 44311 0234455555 5999999999999988 89999973 8999999999876 79999998
Q ss_pred cCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCC-CeEEeEEEEEeEEeccc-eeEEEec-------cC--
Q 011659 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHAL-PVIQNINYRDMVAENVT-MAARLEG-------IA-- 400 (480)
Q Consensus 332 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~-~~i~nIt~~nI~~~~~~-~~~~i~g-------~~-- 400 (480)
.. .+.|+||+|+|++|.+..++++|+... .+. +.++||+|+||++.+.. .|+.|.. .+
T Consensus 203 g~-~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~ 271 (335)
T 1k5c_A 203 AT-GKHVSNVVIKGNTVTRSMYGVRIKAQR----------TATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGT 271 (335)
T ss_dssp CT-TCEEEEEEEESCEEEEEEEEEEEEEET----------TCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCS
T ss_pred cC-CCCEEEEEEEeeEEECCCceEEEEEeC----------CCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCC
Confidence 42 689999999999999999999999652 223 58999999999999985 6888764 22
Q ss_pred CCCeeeEEEEeEE--EEecCCCCccceeE
Q 011659 401 GDPFTGICISNVT--IELTNKPKKLQWNC 427 (480)
Q Consensus 401 ~~~i~~i~~~ni~--~~~~~~~~~~~~~c 427 (480)
+.+++||+|+||+ .+.+.......+.|
T Consensus 272 ~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c 300 (335)
T 1k5c_A 272 GAPFSDVNFTGGATTIKVNNAATRVTVEC 300 (335)
T ss_dssp SSCEEEEEECSSCEEEEECTTCEEEEEEC
T ss_pred CceEEEEEEEEEEEeeEEcCCceEEEEEC
Confidence 4689999999999 44432122344444
No 27
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.86 E-value=1.3e-19 Score=181.49 Aligned_cols=215 Identities=12% Similarity=0.128 Sum_probs=161.0
Q ss_pred EEEEEeeecEEEEe---EEEEeCCC----------------ceEEE-e-ccccEEEEeEEEECCCCCCCCCeEecCCCcc
Q 011659 191 LIEIMYSQNIQISN---LTLINSPS----------------WNVHP-V-YSSSVIVQGITILAPVTSPNTDGINPDSCTN 249 (480)
Q Consensus 191 ~i~~~~~~nv~I~~---v~i~ns~~----------------~~i~~-~-~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~n 249 (480)
+|.+ +.+||+|++ -+|..... ..+.+ . .|+|++|+++++.+++ ..++++..|++
T Consensus 63 ~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP----VHCFDITGSSQ 137 (349)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS----SEEEEEESCEE
T ss_pred eEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC----CceEEEeccCC
Confidence 4666 459999999 56654321 14667 6 7889999999999864 46799999999
Q ss_pred EEEEecEEeeC-Cceeee-----cCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC
Q 011659 250 TRIEDCYIVSG-DDCVAV-----KSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE 323 (480)
Q Consensus 250 V~I~n~~i~~g-dD~iai-----~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~ 323 (480)
|+|+|++|.+. +|...+ +.+.+.+|.... .++||+|+||++.+++ +||+|++. +||+|+||++.+.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~-~s~nV~I~n~~i~~gD-DcIaiksg-----~nI~i~n~~~~~g- 209 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDIS-SSDHVTLDNNHVYNQD-DCVAVTSG-----TNIVVSNMYCSGG- 209 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEE-SCEEEEEEEEEEECSS-CSEEESSE-----EEEEEEEEEEESS-
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEc-cccEEEEEeeEEecCC-CeEEeeCC-----eEEEEEeEEEeCC-
Confidence 99999999862 221100 001222332221 2899999999999887 89999972 8999999999865
Q ss_pred ceEEEEeec-CCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccc-eeEEEecc--
Q 011659 324 SGVRIKTAV-GRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVT-MAARLEGI-- 399 (480)
Q Consensus 324 ~Gi~i~s~~-~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~-~~~~i~g~-- 399 (480)
+||.|.+.. ...+.|+||+|+|++|.+..++++|+... .+.+.++||+|+||++.+.. .++.|...
T Consensus 210 hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~ 279 (349)
T 1hg8_A 210 HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS----------GATGTINNVTYQNIALTNISTYGVDVQQDYL 279 (349)
T ss_dssp CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_pred cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC----------CCCccccceEEEEEEEEccccccEEEEeecc
Confidence 799999872 23588999999999999999999999642 22358999999999999985 68776542
Q ss_pred -------C--CCCeeeEEEEeEEEEecCCCCccceeEe
Q 011659 400 -------A--GDPFTGICISNVTIELTNKPKKLQWNCT 428 (480)
Q Consensus 400 -------~--~~~i~~i~~~ni~~~~~~~~~~~~~~c~ 428 (480)
+ ..+++||+|+||+.+.+.......+.|+
T Consensus 280 ~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 280 NGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp SSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 1369999999999988632334555664
No 28
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.85 E-value=1.8e-19 Score=182.77 Aligned_cols=198 Identities=14% Similarity=0.109 Sum_probs=163.7
Q ss_pred CeEEEEEeeecEEEEeE-EEEeCC---------------------------CceEEEeccccEEEEeEEEECCCCCCCCC
Q 011659 189 PYLIEIMYSQNIQISNL-TLINSP---------------------------SWNVHPVYSSSVIVQGITILAPVTSPNTD 240 (480)
Q Consensus 189 p~~i~~~~~~nv~I~~v-~i~ns~---------------------------~~~i~~~~~~nv~i~~~~i~~~~~~~n~D 240 (480)
..+|.+.+.+|++|.|- +|.... ...+.+..|+|++|+++++.+++ ..
T Consensus 100 ~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp----~~ 175 (376)
T 1bhe_A 100 DAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP----NF 175 (376)
T ss_dssp CCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS----SC
T ss_pred ccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC----cE
Confidence 35788999999999986 554332 12477899999999999999965 34
Q ss_pred eEecCCCccEEEEecEEee-----CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEEEE
Q 011659 241 GINPDSCTNTRIEDCYIVS-----GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRA 314 (480)
Q Consensus 241 GI~~~~s~nV~I~n~~i~~-----gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v 314 (480)
++++..|++|+|+|++|.+ ..|+|.+.+ |+||+|+||++.+++ +||+|++.. ....+||+|
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~------------s~nV~I~n~~i~~gD-DcIaiks~~~~~~s~nI~I 242 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMS------------SKNITIAYSNIATGD-DNVAIKAYKGRAETRNISI 242 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEES------------CEEEEEESCEEECSS-CSEEEEECTTSCCEEEEEE
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecC------------CceEEEEeCEEecCC-CeEEEcccCCCCCceEEEE
Confidence 5899999999999999987 357777765 899999999999988 899999743 247999999
Q ss_pred EeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeE
Q 011659 315 EDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAA 394 (480)
Q Consensus 315 ~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~ 394 (480)
+||+|.. .+|+.|.+... .|+||+|+|+++.+..++++|+.. +.+.+.++||+|+||++.+...|+
T Consensus 243 ~n~~~~~-ghGisiGSe~~---~v~nV~v~n~~~~~t~~GirIKt~----------~g~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 243 LHNDFGT-GHGMSIGSETM---GVYNVTVDDLKMNGTTNGLRIKSD----------KSAAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp EEEEECS-SSCEEEEEEES---SEEEEEEEEEEEESCSEEEEEECC----------TTTCCEEEEEEEEEEEEESCSEEE
T ss_pred EeeEEEc-cccEEeccCCc---cEeeEEEEeeEEeCCCcEEEEEEe----------cCCCceEeeEEEEeEEEeCCCceE
Confidence 9999976 58999998752 799999999999999999999963 223468999999999999998898
Q ss_pred EEeccC-------CCCeeeEEEEeEEEEec
Q 011659 395 RLEGIA-------GDPFTGICISNVTIELT 417 (480)
Q Consensus 395 ~i~g~~-------~~~i~~i~~~ni~~~~~ 417 (480)
.|.... ...++||+|+||+.+.+
T Consensus 309 ~i~~~y~~~~~~~~~~i~ni~~~ni~gt~~ 338 (376)
T 1bhe_A 309 VIDTVYEKKEGSNVPDWSDITFKDVTSETK 338 (376)
T ss_dssp EEETTSSCCCCCCCCEEEEEEEEEEEECSC
T ss_pred EEEeeccCCCCCcCcEEEEEEEEEEEEEec
Confidence 886421 23599999999999864
No 29
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.85 E-value=9.5e-20 Score=195.13 Aligned_cols=250 Identities=13% Similarity=0.133 Sum_probs=194.9
Q ss_pred eeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEe--CC-CceEEEeccccEE
Q 011659 148 SSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN--SP-SWNVHPVYSSSVI 224 (480)
Q Consensus 148 ~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~n--s~-~~~i~~~~~~nv~ 224 (480)
..+|.+.+++|++|.|- +|.-. +. +.+++.+|+|++|+++++.+ ++ .+++++..|+||+
T Consensus 331 P~~i~~~~~~nv~I~gi--ti~ns--~~--------------~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~ 392 (608)
T 2uvf_A 331 SSLMTLRGVENVYLAGF--TVRNP--AF--------------HGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVM 392 (608)
T ss_dssp CCSEEEESEEEEEEESC--EEECC--SS--------------CSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEE
T ss_pred CeEEEEEeeeeEEEeCc--EEecC--CC--------------CEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEE
Confidence 35789999999999994 44321 12 25999999999999999865 22 4789999999999
Q ss_pred EEeEEEECCCC------CCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcce
Q 011659 225 VQGITILAPVT------SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298 (480)
Q Consensus 225 i~~~~i~~~~~------~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g 298 (480)
|+|++|.+.++ +.+.||++...|+||+|+||++..++++++++++. ....+||+|+||+|.+.. +|
T Consensus 393 I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~-------~~~v~nI~v~n~~~~~t~-~G 464 (608)
T 2uvf_A 393 VFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHT-------GAWIEDILAENNVMYLTD-IG 464 (608)
T ss_dssp EESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCC-------TTCEEEEEEESCEEESCS-EE
T ss_pred EEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccC-------CCCEEEEEEEeEEEECCC-ce
Confidence 99999997653 34566666567899999999999999988888742 234899999999999887 89
Q ss_pred EEEccc--ccCceeEEEEEeeEEeCC-CceEEEEeecCC------------CCceecEEEEeeEecccc---eeEEEEee
Q 011659 299 IALGSE--MSGGIQDVRAEDITAIDS-ESGVRIKTAVGR------------GGFVKDVYVRRMTMKTMK---WAFWITGS 360 (480)
Q Consensus 299 i~igs~--~~~~v~nI~v~n~~~~~~-~~Gi~i~s~~~~------------~g~v~nI~~~ni~~~~~~---~~i~i~~~ 360 (480)
++|++. ..+.++||+|+|++|.+. ..+|.|+..... .+.+++|+|+||+++++. .++.|...
T Consensus 465 irIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~ 544 (608)
T 2uvf_A 465 LRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD 544 (608)
T ss_dssp EEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB
T ss_pred EEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE
Confidence 999874 345799999999999998 589999876531 256899999999999865 46777632
Q ss_pred cCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEeccCCCCeeeEEEEeEEEEecCCCCccceeEeeeeccC-CcccC
Q 011659 361 YGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIELTNKPKKLQWNCTDITGIS-SGVTP 439 (480)
Q Consensus 361 ~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g~~~~~i~~i~~~ni~~~~~~~~~~~~~~c~~~~~~~-~~~~p 439 (480)
++....++||+|+||+++..+ +..+. .+++++|+||.++..+ ....|.|.++++.. ..+.|
T Consensus 545 ----------~~~~~p~~ni~~~nv~i~~~~-~~~i~-----~~~~~~~~nv~i~~~~--~~~~~~~~~v~~~~~~~v~~ 606 (608)
T 2uvf_A 545 ----------TANKAWHRLVHVNNVQLNNVT-PTAIS-----DLRDSEFNKVTFTELR--GDTPWHFSEVKNVKVDGKPV 606 (608)
T ss_dssp ----------GGGTBCEEEEEEEEEEEESCC-CCEEE-----SEESCEEEEEEEESCS--SSCSCCEESCBSCCBTTCCC
T ss_pred ----------cCCCCccccEEEEeEEEEccC-ceeEE-----eccCceEEeEEEeCCC--CCccEEEEeeeceEEcceEe
Confidence 111236999999999998764 44554 5889999999998642 23469999999987 46766
Q ss_pred CC
Q 011659 440 KP 441 (480)
Q Consensus 440 ~~ 441 (480)
.|
T Consensus 607 ~p 608 (608)
T 2uvf_A 607 AP 608 (608)
T ss_dssp --
T ss_pred CC
Confidence 54
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.69 E-value=2.1e-15 Score=158.65 Aligned_cols=252 Identities=9% Similarity=0.052 Sum_probs=170.1
Q ss_pred CCCcE-EEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCCCCCCCCCCCCccccCCC-CcceeeEEEeceeceEEe
Q 011659 85 EGGSQ-LFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPVIEPLPSYGRGRDTEG-GRYSSLIFGTNLTDVVIT 162 (480)
Q Consensus 85 ~~g~~-v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~i~~~~~~nv~I~ 162 (480)
..+-+ |++++|.++.+.+.+.+...|.+..+++|-+... .-|.... ..+......+. -.+..++.+.+++||.|+
T Consensus 262 kSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~-~ww~~~~--~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~ 338 (574)
T 1ogo_X 262 NSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENY-VYQANAG--DNYIAVKSDSTSLRMWWHNNLGGGQTWYCV 338 (574)
T ss_dssp CTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTS-CTTCBTT--TTTBSCCCTTTBCCSEEECSCCSSEEEEEE
T ss_pred cCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCc-ccccccc--cccccccCCcceEEEEeccccCCceeEEEE
Confidence 34566 9999999999999999888888888888876532 1121100 00000000000 001111223389999999
Q ss_pred CccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecE--EEEeEEEEeCC---CceEEEeccccEEEEeEEEECCCCCC
Q 011659 163 GDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNI--QISNLTLINSP---SWNVHPVYSSSVIVQGITILAPVTSP 237 (480)
Q Consensus 163 G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv--~I~~v~i~ns~---~~~i~~~~~~nv~i~~~~i~~~~~~~ 237 (480)
|. ...+. +.| .+++..|+|| +|+++++.+++ ..++++. +||+|+|++|.+.
T Consensus 339 Gi-ti~NS---p~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g---- 394 (574)
T 1ogo_X 339 GP-TINAP---PFN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN---- 394 (574)
T ss_dssp SC-EEECC---SSC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES----
T ss_pred Ce-EEECC---CCc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC----
Confidence 95 44442 223 3889999999 99999998754 4578887 9999999999974
Q ss_pred CCCeEecCCCccEEEEecEEeeCCc-e-eeecCCCCccCcccCCCceeEEEEEEEEeCCCc-------ceEEEcccc---
Q 011659 238 NTDGINPDSCTNTRIEDCYIVSGDD-C-VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-------AVIALGSEM--- 305 (480)
Q Consensus 238 n~DGI~~~~s~nV~I~n~~i~~gdD-~-iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~-------~gi~igs~~--- 305 (480)
.|+|.+.+ +||+|+||.+..+.. + |.+++. ....+||+|+||++.+... .+..+|++.
T Consensus 395 -DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~--------~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~ 464 (574)
T 1ogo_X 395 -DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWT--------SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYA 464 (574)
T ss_dssp -SCSEECCS-TTCEEEEEEEEECSSSCSEECCSS--------CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSS
T ss_pred -CCEEEECC-ccEEEEeEEEECCCCCceEEEcCC--------CCcEEEEEEEeEEEECCcccceeccccceeeccccccc
Confidence 58898865 999999999998654 3 777762 2358999999999976531 133333321
Q ss_pred -------cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecc------cce-eEEEEeecCCCCCCCCCC
Q 011659 306 -------SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKT------MKW-AFWITGSYGSHPDNNYDP 371 (480)
Q Consensus 306 -------~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~ 371 (480)
..++ ||+|+|+++.+...++ |.... ...|+||+|+|+++++ ... +..+.. + +
T Consensus 465 ~~~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G-~---------~ 530 (574)
T 1ogo_X 465 SGMSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPA-A---------S 530 (574)
T ss_dssp SSCCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECC-C---------T
T ss_pred cccccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEec-C---------C
Confidence 1128 9999999999987775 44432 4679999999999987 211 112211 0 1
Q ss_pred CCCCeEEeEEEEEeEEecc
Q 011659 372 HALPVIQNINYRDMVAENV 390 (480)
Q Consensus 372 ~~~~~i~nIt~~nI~~~~~ 390 (480)
..++||+|+||++...
T Consensus 531 ---~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 ---GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp ---TCCEEEEEEEEEETTE
T ss_pred ---CccceEEEEeEEEeCE
Confidence 3689999999998654
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.68 E-value=6.7e-16 Score=162.57 Aligned_cols=199 Identities=14% Similarity=0.124 Sum_probs=144.8
Q ss_pred EEEE-eeecEEEEeEEEEeCCC-------------------ceEEE------eccccEEEEeEEEECCCCCCCCCeEecC
Q 011659 192 IEIM-YSQNIQISNLTLINSPS-------------------WNVHP------VYSSSVIVQGITILAPVTSPNTDGINPD 245 (480)
Q Consensus 192 i~~~-~~~nv~I~~v~i~ns~~-------------------~~i~~------~~~~nv~i~~~~i~~~~~~~n~DGI~~~ 245 (480)
+.+. +++|++|.|--+.+..+ ..+.+ ..|+|++|+++++.+++. ..+++.
T Consensus 238 ~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~----w~i~i~ 313 (549)
T 1x0c_A 238 VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPF----NSMDWS 313 (549)
T ss_dssp EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSS----CSEEEE
T ss_pred EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEECcEEECCCc----eeEEee
Confidence 3445 89999999876665542 13556 999999999999999762 237743
Q ss_pred -CC-cc--EEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeC
Q 011659 246 -SC-TN--TRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321 (480)
Q Consensus 246 -~s-~n--V~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~ 321 (480)
.| ++ |+|+|+.+.+.. +++.+|.... +||+|+||++.+++ +||+|++ +||+|+||+|..
T Consensus 314 ~~~~~ni~V~I~n~~i~~~~-------~~NTDGidi~---~nV~I~n~~i~~gD-DcIaIks------~NI~I~n~~~~~ 376 (549)
T 1x0c_A 314 GNSLDLITCRVDDYKQVGAF-------YGQTDGLEMY---PGTILQDVFYHTDD-DGLKMYY------SNVTARNIVMWK 376 (549)
T ss_dssp CSCGGGEEEEEEEEEEECCC-------BTTCCCCBCC---TTCEEEEEEEEESS-CCEECCS------SSEEEEEEEEEE
T ss_pred ccCCCCCeEEEEeeEeEcCC-------CCCCCccccc---CCEEEEeeEEeCCC-CEEEECC------CCEEEEeeEEEc
Confidence 56 79 999999986521 1223444333 89999999999998 8999997 899999999986
Q ss_pred C-Cce-EEEEeecCCCCceecEEEEeeEecccce------eEEEEe--ec--CCCCCCCCCCCCCCeEEeEEEEEeEEec
Q 011659 322 S-ESG-VRIKTAVGRGGFVKDVYVRRMTMKTMKW------AFWITG--SY--GSHPDNNYDPHALPVIQNINYRDMVAEN 389 (480)
Q Consensus 322 ~-~~G-i~i~s~~~~~g~v~nI~~~ni~~~~~~~------~i~i~~--~~--~~~~~~~~~~~~~~~i~nIt~~nI~~~~ 389 (480)
. .++ |.|.+. .+.|+||+|+|++|.+..+ +..|+. .| .. ..... ...+.|+||+|+||++.+
T Consensus 377 ~~g~~~IsiGs~---~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~-~~~~~--d~~G~i~nI~f~NI~i~n 450 (549)
T 1x0c_A 377 ESVAPVVEFGWT---PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAP-DGLSS--NHSTGNSNMTVRNITWSN 450 (549)
T ss_dssp CSSSCSEECCBS---CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCT-TSCCS--CCCCBEEEEEEEEEEEEE
T ss_pred CCCCceEEECCC---CCcEEEEEEEeeEEECccccccccceEEEecccccccCc-cccCc--CCCceEccEEEEeEEEEe
Confidence 5 356 888773 6899999999999998753 333554 23 22 11111 113589999999999877
Q ss_pred cc-eeEEE---eccCCCCeeeEEEEeEEEEec
Q 011659 390 VT-MAARL---EGIAGDPFTGICISNVTIELT 417 (480)
Q Consensus 390 ~~-~~~~i---~g~~~~~i~~i~~~ni~~~~~ 417 (480)
.. .+..+ .+.++.+++||+|+||+++..
T Consensus 451 v~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~ 482 (549)
T 1x0c_A 451 FRAEGSSSALFRINPIQNLDNISIKNVSIESF 482 (549)
T ss_dssp EEEEEEECCSEEECCSEEEEEEEEEEEEEEEE
T ss_pred EEEeceEEeeecCCCCCcCccEEEEEEEEEcc
Confidence 64 32221 367778899999999999875
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.57 E-value=9.7e-14 Score=137.71 Aligned_cols=246 Identities=10% Similarity=0.116 Sum_probs=162.4
Q ss_pred CceeEEEeec----CcCCCCcchhHHHHHHHHHHhhhc----ccCCCcEEEeCCCeeee-eeeccccc-ceEEEeeCcE-
Q 011659 49 RAHSASLEEF----GGVGDGTTSNTKAFKAAIDHLSRF----QSEGGSQLFVPPGKWLT-GSFNLTSH-FTLFLHKDAV- 117 (480)
Q Consensus 49 ~~~~~nV~df----GA~gDg~tddT~Aiq~Ai~~~~~~----~~~~g~~v~iP~G~Y~~-~~l~l~sn-~~l~~~~ga~- 117 (480)
...++||++| +|+||+.+|++++|+++|+++++. .+.+|.+|++|+|+|.+ +++.+... ++|..++++.
T Consensus 11 ~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdkp~LtL~G~~~g~~ 90 (410)
T 2inu_A 11 SPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGFF 90 (410)
T ss_dssp -CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECCTTEEEECSCCCCC
T ss_pred cCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEecCcEEEEecCCCcc
Confidence 4679999999 899999999999999999998631 12579999999999974 79988877 8987765333
Q ss_pred ---EEecCCCCCCCCCCCCCCCCccccC--CC-CcceeeEEEec-----eeceEEeCccceEeCCChhhhhhhccCCCCc
Q 011659 118 ---LLASQDEKEWPVIEPLPSYGRGRDT--EG-GRYSSLIFGTN-----LTDVVITGDNGTIDGQGELWWRKFRAGELKY 186 (480)
Q Consensus 118 ---i~~~~~~~~~~~~~~~~~~~~g~~~--~~-~~~~~~i~~~~-----~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~ 186 (480)
|.+......|.... +.|..+ .. ......|..+. +.+|+|.| -+|+|---.-|. ....
T Consensus 91 s~~Id~~~~~~g~~~~~-----g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~--v~I~G~~~~~~G-----~s~~ 158 (410)
T 2inu_A 91 SRSILDNSNPTGWQNLQ-----PGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD--FCLDGVGFTPGK-----NSYH 158 (410)
T ss_dssp CHHHHHTSCCTTCSCCS-----CCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES--CEEECCCCSSST-----TSCC
T ss_pred eeEEecccccCcccccC-----CCCcEEEEeccccccceeEEeeccCcccCCcEECC--EEEECCEeecCC-----CCcc
Confidence 33211111221100 011100 00 00011222221 25566665 355553110010 0112
Q ss_pred CCCeEEEEEe-eecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCC-CccEEEEecEEeeCCce-
Q 011659 187 TRPYLIEIMY-SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDS-CTNTRIEDCYIVSGDDC- 263 (480)
Q Consensus 187 ~~p~~i~~~~-~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~-s~nV~I~n~~i~~gdD~- 263 (480)
.....|.+.. +++++|+++.|.+. .+++.+..+++++|++.+|.. ...||++.+ ++...|+++.+..++|+
T Consensus 159 ~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~~dG~ 232 (410)
T 2inu_A 159 NGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAGPDGV 232 (410)
T ss_dssp CSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECCTTSE
T ss_pred cCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeecCCCC
Confidence 3345788875 88999999999886 589999999999999999994 457889887 78888999999888887
Q ss_pred -eeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEE
Q 011659 264 -VAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIK 329 (480)
Q Consensus 264 -iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~ 329 (480)
|.+.. +.+.+|+++.+.....+||-+- ...+-.|+++.|.+...|+.+-
T Consensus 233 gIyl~n------------s~~~~I~~N~i~~~~R~gIh~m-----~s~~~~i~~N~f~~~~~Gi~~M 282 (410)
T 2inu_A 233 TLLAEN------------HEGLLVTGNNLFPRGRSLIEFT-----GCNRCSVTSNRLQGFYPGMLRL 282 (410)
T ss_dssp EEEEES------------EESCEEESCEECSCSSEEEEEE-----SCBSCEEESCEEEESSSCSEEE
T ss_pred EEEEEe------------CCCCEEECCCcccCcceEEEEE-----ccCCCEEECCEEecceeEEEEE
Confidence 55543 7888888887743223677764 3456677788887777776654
No 33
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.56 E-value=4.3e-14 Score=145.43 Aligned_cols=160 Identities=10% Similarity=0.041 Sum_probs=124.2
Q ss_pred EeeecEEEEeEE---EEeCC------CceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceee
Q 011659 195 MYSQNIQISNLT---LINSP------SWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265 (480)
Q Consensus 195 ~~~~nv~I~~v~---i~ns~------~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~ia 265 (480)
.+.+|++|+|-- +.+.. ...+.+..|+|++|+++++.+.. .+..+.+|.+. .+|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 568888888862 33322 12467899999999999999732 13344444443 356666
Q ss_pred ecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEee-----cCCCCceec
Q 011659 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTA-----VGRGGFVKD 340 (480)
Q Consensus 266 i~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~-----~~~~g~v~n 340 (480)
+ . ++||+|+||++.+++ +|+ |+.....++||+|+||+|.+ ..|++|+++ .+.+|.++|
T Consensus 172 i-~------------s~nV~I~n~~I~~gd-dgi--Gs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~N 234 (464)
T 1h80_A 172 H-W------------SRNGIIERIKQNNAL-FGY--GLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRN 234 (464)
T ss_dssp E-E------------EEEEEEEEEEEESCC-TTC--EEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEE
T ss_pred e-e------------ccCEEEeceEEecCC-CeE--EecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEE
Confidence 5 1 899999999999886 666 33445689999999999999 899999998 556789999
Q ss_pred EEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEec
Q 011659 341 VYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG 398 (480)
Q Consensus 341 I~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g 398 (480)
|+|+|++|+++.+||.|++. . ..++||+|+||++++...++.|.+
T Consensus 235 I~~~Ni~~~nv~~~I~I~p~------------~-~~isnItfeNI~~t~~~~aI~i~q 279 (464)
T 1h80_A 235 IFADNIRCSKGLAAVMFGPH------------F-MKNGDVQVTNVSSVSCGSAVRSDS 279 (464)
T ss_dssp EEEEEEEEESSSEEEEEECT------------T-CBCCCEEEEEEEEESSSCSEEECC
T ss_pred EEEEeEEEECCceeEEEeCC------------C-ceEeEEEEEEEEEEccceeEEEec
Confidence 99999999999999999831 1 368999999999999888887753
No 34
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.41 E-value=2.6e-11 Score=126.76 Aligned_cols=182 Identities=18% Similarity=0.088 Sum_probs=129.8
Q ss_pred EEEEeeecEEEEeEEEEeC--------------CCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEE
Q 011659 192 IEIMYSQNIQISNLTLINS--------------PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns--------------~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i 257 (480)
+.+.+.+||+|++.+|... ....+.+..|+|++|+++++.+++ .+|+.+.++.+ |
T Consensus 100 I~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp----~~gI~I~~~~~----N--- 168 (609)
T 3gq8_A 100 NVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT----LHGIDITCGGL----D--- 168 (609)
T ss_dssp CTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS----SCSEEEECSSS----S---
T ss_pred eeecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCC----CCCeEEeCCCC----C---
Confidence 3556789999999966531 113477889999999999998864 25565544332 1
Q ss_pred eeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC-CCcceEEEcccccCceeEEEEEeeEEeCC-----CceEEEEee
Q 011659 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDS-----ESGVRIKTA 331 (480)
Q Consensus 258 ~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~-~~~~gi~igs~~~~~v~nI~v~n~~~~~~-----~~Gi~i~s~ 331 (480)
|++.+ ++.....+|+||+|+||++++ .+ +||+|++ .+||+|+||+|++. .+|+.|.+
T Consensus 169 ----DGid~------DGi~fd~~S~NV~I~Nc~I~~tGD-DcIaIks-----seNI~I~Nc~~~gp~G~S~~~GIsIGs- 231 (609)
T 3gq8_A 169 ----YPYLG------DGTTAPNPSENIWIENCEATGFGD-DGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDD- 231 (609)
T ss_dssp ----CCCCC------TTCCCSSCCEEEEEESCEEESCSS-CSEEECS-----CEEEEEESCEEECCSSCSSCCSEEECT-
T ss_pred ----ccccC------CCccccccceeEEEEeeEEEecCC-CEEEecC-----CeeEEEEeEEEECCCCCCCcccEEccC-
Confidence 33333 222233459999999999965 55 8999974 89999999999765 47888852
Q ss_pred cCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEE-eEEecc-ceeEEEecc------CCCC
Q 011659 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRD-MVAENV-TMAARLEGI------AGDP 403 (480)
Q Consensus 332 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~n-I~~~~~-~~~~~i~g~------~~~~ 403 (480)
..+||+|+|+++.+..++++|+.. + ..+.++||+|.| +...+. .+.+...|. ...+
T Consensus 232 -----gs~NVtV~Nc~i~nt~~GIrIKt~----------~-~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~ 295 (609)
T 3gq8_A 232 -----GSRHVVLSNNRSKGCYGGIEIKAH----------G-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVS 295 (609)
T ss_dssp -----TCEEEEEESEEEESSSEEEEEEEC----------T-TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSS
T ss_pred -----CcccEEEEeeEEECCCCEEEEEec----------C-CCCccccEEEECCEeecCceEecceEEccccCCCCCcce
Confidence 239999999999999999999963 1 124788999887 555444 234444443 3347
Q ss_pred eeeEEEEeEEEEec
Q 011659 404 FTGICISNVTIELT 417 (480)
Q Consensus 404 i~~i~~~ni~~~~~ 417 (480)
..+|.|.|+.....
T Consensus 296 a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 296 AKNIVASNLVSIRP 309 (609)
T ss_dssp CEEEEEEEEEEESC
T ss_pred ecceEeecceEEee
Confidence 88999999988754
No 35
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.38 E-value=3.2e-11 Score=128.11 Aligned_cols=182 Identities=19% Similarity=0.100 Sum_probs=128.4
Q ss_pred EEEEeeecEEEEeEEEEeC--------------CCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEE
Q 011659 192 IEIMYSQNIQISNLTLINS--------------PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYI 257 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns--------------~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i 257 (480)
+.+.+++||+|++.+|... ....|.+..|+|++|+++++.+++. +|+.+.+..+ |
T Consensus 100 I~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~----~gI~I~np~~----N--- 168 (772)
T 3gqn_A 100 NVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTL----HGIDITCGGL----D--- 168 (772)
T ss_dssp CTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSS----CSEEEECSSS----S---
T ss_pred eeccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCC----CCEEEeCCCc----C---
Confidence 3566889999999966531 1134778899999999999988542 4555543332 1
Q ss_pred eeCCceeeecCCCCccCcccCCCceeEEEEEEEEeC-CCcceEEEcccccCceeEEEEEeeEEeCC-----CceEEEEee
Q 011659 258 VSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCIS-PFSAVIALGSEMSGGIQDVRAEDITAIDS-----ESGVRIKTA 331 (480)
Q Consensus 258 ~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~-~~~~gi~igs~~~~~v~nI~v~n~~~~~~-----~~Gi~i~s~ 331 (480)
|++.+ ++.....+|+||+|+||++++ .+ +||+|++ .+||+|+||+|.+. .+|+.|.+
T Consensus 169 ----DGid~------DGi~fdi~S~NV~I~Nc~I~ntGD-DcIAIks-----SeNI~I~Nc~c~gphG~S~~~GIsIGs- 231 (772)
T 3gqn_A 169 ----YPYLG------DGTTAPNPSENIWIENCEATGFGD-DGITTHH-----SQYINILNCYSHDPRLTANCNGFEIDD- 231 (772)
T ss_dssp ----CCCCC------TTCCCSSCCEEEEEESCEEESCSS-CSEEECS-----CEEEEEESCEEECCSSSSSCCSEEECT-
T ss_pred ----CcCCC------cCcccccccceEEEEeeEEEecCc-CeEEecC-----CceEEEEeEEEECCCCCCCcccEEecC-
Confidence 33332 222233459999999999965 55 8999974 89999999999765 47888862
Q ss_pred cCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEE-eEEeccc-eeEEEecc------CCCC
Q 011659 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRD-MVAENVT-MAARLEGI------AGDP 403 (480)
Q Consensus 332 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~n-I~~~~~~-~~~~i~g~------~~~~ 403 (480)
..+||+|+|+++.+..++++|+.. . ..+.++||+|.| +...+.. +.+...|. ...+
T Consensus 232 -----gs~NVtV~Nc~~~nT~nGIRIKt~-~----------~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~ 295 (772)
T 3gqn_A 232 -----GSRHVVLSNNRSKGCYGGIEIKAH-G----------DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVS 295 (772)
T ss_dssp -----TCEEEEEEEEEEESSSEEEEECCC-T----------TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSS
T ss_pred -----CcccEEEEceEEECCCcEEEEEEe-C----------CCCccccEEEECCEEeccCeEecceEEccccCCCCCCcc
Confidence 239999999999999999999942 1 124788998884 7765542 23333332 3347
Q ss_pred eeeEEEEeEEEEec
Q 011659 404 FTGICISNVTIELT 417 (480)
Q Consensus 404 i~~i~~~ni~~~~~ 417 (480)
..+|.|.|+.....
T Consensus 296 a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 296 AKNIVASNLVSIRP 309 (772)
T ss_dssp CEEEEEEEEEEESC
T ss_pred CccEEeecceEEcc
Confidence 88999999988754
No 36
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.34 E-value=1.8e-12 Score=134.89 Aligned_cols=180 Identities=13% Similarity=0.098 Sum_probs=128.9
Q ss_pred eEEEEEeeecEEEEeEEEEeCCC---c-----e-----EEEeccccEEEEeEEEECC-CCCCCCCeEec---CCCccEEE
Q 011659 190 YLIEIMYSQNIQISNLTLINSPS---W-----N-----VHPVYSSSVIVQGITILAP-VTSPNTDGINP---DSCTNTRI 252 (480)
Q Consensus 190 ~~i~~~~~~nv~I~~v~i~ns~~---~-----~-----i~~~~~~nv~i~~~~i~~~-~~~~n~DGI~~---~~s~nV~I 252 (480)
.+|.+.+++|++|.|--..+... | . +.+..|+ |+++++.++ + ...+++ ..|+||+|
T Consensus 142 slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NSDP----~w~I~iG~~~~c~NVtI 214 (600)
T 2x6w_A 142 DPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNGDV----TWAITLGWNGYGSNCYV 214 (600)
T ss_dssp SGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESCCC----SCSEEECBTTBEEEEEE
T ss_pred ceEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECCCC----ccEEEeCCCCCcccEEE
Confidence 35677889999999854444332 1 1 4556676 999999996 4 234888 89999999
Q ss_pred EecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEE-cccccCceeEEEEEeeEEeCCCceEEEEee
Q 011659 253 EDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIAL-GSEMSGGIQDVRAEDITAIDSESGVRIKTA 331 (480)
Q Consensus 253 ~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~i-gs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~ 331 (480)
+|++|.+ ++.+..+.+|. |+|+||++.+++ +||+| ++... .++.++ ++....+||.|.+.
T Consensus 215 ~nvtfi~-----aI~sspNTDGI--------V~I~nc~I~tGD-DCIAI~KSGs~---~ni~~e--~~~~GHgGISIGSe 275 (600)
T 2x6w_A 215 RKCRFIN-----LVNSSVNADHS--------TVYVNCPYSGVE-SCYFSMSSSFA---RNIACS--VQLHQHDTFYRGST 275 (600)
T ss_dssp ESCEEEC-----CCCCSSCCCEE--------EEEECSSSEEEE-SCEEECCCTTH---HHHEEE--EEECSSSEEEESCE
T ss_pred eCeEEcc-----eEecCCCCCEE--------EEEEeeEEecCC-cEEEEecCCCc---CCeEEE--EEcCCCCcEEeccc
Confidence 9999322 11112233442 999999999988 99999 87642 345555 45555469999886
Q ss_pred cCCCCceecEEEEeeEecccceeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEeccceeEEEec----cCCCCeeeE
Q 011659 332 VGRGGFVKDVYVRRMTMKTMKWAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENVTMAARLEG----IAGDPFTGI 407 (480)
Q Consensus 332 ~~~~g~v~nI~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~~~~~~i~g----~~~~~i~~i 407 (480)
. .+.|+||+|+| +++. .. .+.+.++||+|+||++.++..++.+.. .+..+++||
T Consensus 276 ~--~ggV~NV~V~N-rIKt---------~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnI 333 (600)
T 2x6w_A 276 V--NGYCRGAYVVM-HAAE---------AA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDV 333 (600)
T ss_dssp E--EEESEEEEEEE-CGGG---------CT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEE
T ss_pred c--cCcEEEEEEEE-EEEe---------ec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEE
Confidence 3 57899999999 3332 11 123689999999999999887776633 344679999
Q ss_pred EEEeEEEEec
Q 011659 408 CISNVTIELT 417 (480)
Q Consensus 408 ~~~ni~~~~~ 417 (480)
+|+||+.+..
T Consensus 334 tfkNItgTsa 343 (600)
T 2x6w_A 334 IVSGNIVSIG 343 (600)
T ss_dssp EEESCEEEEC
T ss_pred EEEeEEEEec
Confidence 9999999975
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.30 E-value=7.2e-11 Score=119.61 Aligned_cols=218 Identities=12% Similarity=0.049 Sum_probs=153.7
Q ss_pred ceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeee-cEEEEeEEEEeCCCceEEEeccccEEEEeEEEECC
Q 011659 155 NLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQ-NIQISNLTLINSPSWNVHPVYSSSVIVQGITILAP 233 (480)
Q Consensus 155 ~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~-nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~ 233 (480)
++++++|+|- ++... ....+++..|. ++.++++.+.+...+++.+..|++.+|++.++..
T Consensus 132 ~~~nv~I~~~--~i~n~----------------~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~- 192 (377)
T 2pyg_A 132 ADRDVTIERV--EVREM----------------SGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA- 192 (377)
T ss_dssp CEEEEEEEEE--EEECC----------------SSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES-
T ss_pred cccceEEEeE--EEEec----------------ccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc-
Confidence 5788888883 33211 11247777654 7899999998888899999999999999997775
Q ss_pred CCCCCCCeEecCC-CccEEEEecEEeeCCceeeecC-CCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeE
Q 011659 234 VTSPNTDGINPDS-CTNTRIEDCYIVSGDDCVAVKS-GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD 311 (480)
Q Consensus 234 ~~~~n~DGI~~~~-s~nV~I~n~~i~~gdD~iai~s-g~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~n 311 (480)
++.|||++.. +++++|+|+.+...++|+++.. +.+ ....++|++|+++++++..+.|+.+. .+++
T Consensus 193 ---~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~-----~~~~s~nv~i~~N~~~~n~~~Gi~~~-----~~~~ 259 (377)
T 2pyg_A 193 ---NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLE-----DLALPSNILIDGGAYYDNAREGVLLK-----MTSD 259 (377)
T ss_dssp ---CSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSS-----CCCCCEEEEEESCEEESCSSCSEEEE-----EEEE
T ss_pred ---cccCcEEEEeccCCeEEECCEEECccCceEEEecccc-----CCCCCccEEEECCEEEcCccCceEec-----cccC
Confidence 4689999876 9999999999999888888731 111 12238999999999997555788875 4899
Q ss_pred EEEEeeEEeCC-CceEEEEeecCCCCceecEEEEeeEecccce----eEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeE
Q 011659 312 VRAEDITAIDS-ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW----AFWITGSYGSHPDNNYDPHALPVIQNINYRDMV 386 (480)
Q Consensus 312 I~v~n~~~~~~-~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~ 386 (480)
++|+|+++.++ ..||+|+. +++++|+|.++.+... +..+.+.|...+.. . .. .-.-++++|++.+
T Consensus 260 v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~-~-~~-~~~~~~~~i~~N~ 329 (377)
T 2pyg_A 260 ITLQNADIHGNGSSGVRVYG-------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGA-S-GT-YYTTLNTRIEGNT 329 (377)
T ss_dssp EEEESCEEESCSSCSEEEEE-------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSS-S-CE-EECCBCCEEESCE
T ss_pred eEEECCEEECCCCceEEEec-------CCCcEEECcEEECCcccccccceEEEEecCCCcc-c-ee-eeeccCeEEECCE
Confidence 99999999998 79999983 6889999999987543 33333334322110 0 00 0001455566555
Q ss_pred Eecc---ceeEEEeccCCCCeeeEEEEeEEEEec
Q 011659 387 AENV---TMAARLEGIAGDPFTGICISNVTIELT 417 (480)
Q Consensus 387 ~~~~---~~~~~i~g~~~~~i~~i~~~ni~~~~~ 417 (480)
+.+. ...+.+.+ ..+++++++|..+...
T Consensus 330 i~g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 330 ISGSANSTYGIQERN---DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp EECCSSCCEEEEECS---SSCBCCEEESCEEESS
T ss_pred EECcCCCccceEEcc---CCCccEEEECcEEeCC
Confidence 5542 34555544 5567888888888764
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.25 E-value=2.9e-11 Score=128.39 Aligned_cols=70 Identities=19% Similarity=0.343 Sum_probs=61.0
Q ss_pred cCceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeee-eecccccceEEEeeCcEEEecC
Q 011659 48 CRAHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTG-SFNLTSHFTLFLHKDAVLLASQ 122 (480)
Q Consensus 48 ~~~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~-~l~l~sn~~l~~~~ga~i~~~~ 122 (480)
+...++||+||||+|||++|||+|||+||+++ .++.+|+||+|+|++. +|.+++++.|..+.-.+|++..
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-----~~g~~v~~P~G~Y~vt~Ti~ip~~~~ivG~~~~~I~~~G 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-----AGCKIIFFDAGTYIVTDTIQIPAGTQIVGEVWSVIMGTG 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH-----TTTSEEECCSEEEEESSCEEECTTCEEECCSSEEEEECS
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh-----cCCCEEEECCCEeEECCeEEcCCCCEEEecccceEecCC
Confidence 44679999999999999999999999999965 4688999999999876 8999999999877667777653
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.18 E-value=1.4e-09 Score=110.21 Aligned_cols=248 Identities=13% Similarity=0.139 Sum_probs=152.7
Q ss_pred CceeEEEeecCc-CCCCcchhHH-HHHHHHHHhhhcccCCCcEEEeCCCeee-------eeeeccc-cc-----ceEEEe
Q 011659 49 RAHSASLEEFGG-VGDGTTSNTK-AFKAAIDHLSRFQSEGGSQLFVPPGKWL-------TGSFNLT-SH-----FTLFLH 113 (480)
Q Consensus 49 ~~~~~nV~dfGA-~gDg~tddT~-Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~-------~~~l~l~-sn-----~~l~~~ 113 (480)
.+.++.|..-|- .++|.+-+.+ -||+|++.+ .+|.+|++.+|+|. ...+.+. ++ ++|.-.
T Consensus 13 ~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a-----~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~ 87 (400)
T 1ru4_A 13 TKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV-----NPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAA 87 (400)
T ss_dssp CSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC-----CTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred CccEEEEcCCCCCCCCCccccCCccHHHHHhhC-----CCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEe
Confidence 455677765553 2334122222 699999987 46899999999998 2344443 32 555444
Q ss_pred e--CcEEEecCCCC-CCCCCCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCe
Q 011659 114 K--DAVLLASQDEK-EWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPY 190 (480)
Q Consensus 114 ~--ga~i~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~ 190 (480)
+ .++|. ..... .+.. . . .-|.. ....++|+| -+|...+. .
T Consensus 88 ~g~~~vI~-~~~~~g~~~~---------~------~--~~i~i-~~~~~~i~g--l~I~n~g~----------------~ 130 (400)
T 1ru4_A 88 NCGRAVFD-FSFPDSQWVQ---------A------S--YGFYV-TGDYWYFKG--VEVTRAGY----------------Q 130 (400)
T ss_dssp GGCCEEEE-CCCCTTCCCT---------T------C--CSEEE-CSSCEEEES--EEEESCSS----------------C
T ss_pred cCCCCEEe-CCccCCcccc---------c------e--eEEEE-ECCeEEEEe--EEEEeCCC----------------C
Confidence 3 23333 21100 0000 0 0 01222 345555655 34432221 0
Q ss_pred EEEEEeeecEEEEeEEEEeCCCceEEEeccc-cEEEEeEEEECCCC----CCCCCeEecCCC--ccEEEEecEEee-CCc
Q 011659 191 LIEIMYSQNIQISNLTLINSPSWNVHPVYSS-SVIVQGITILAPVT----SPNTDGINPDSC--TNTRIEDCYIVS-GDD 262 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~-nv~i~~~~i~~~~~----~~n~DGI~~~~s--~nV~I~n~~i~~-gdD 262 (480)
.|.+.. ++.+|+++++.+....+|.+.... +.+|.++++....+ ..+.|||.+..+ ++.+|++|.+.. .||
T Consensus 131 GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 131 GAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp SEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred cEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 355555 678899999998877788888654 88888999987653 246789887643 678899999864 678
Q ss_pred eeeecCCCCccCcccCCCceeEEEEEEEEeCC------------CcceEEEcccccCceeEEEEEeeEEeCCC-ceEEEE
Q 011659 263 CVAVKSGWDQYGIAYGMPTKQLIIRRLTCISP------------FSAVIALGSEMSGGIQDVRAEDITAIDSE-SGVRIK 329 (480)
Q Consensus 263 ~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~------------~~~gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i~ 329 (480)
++.+... ...++|+||..+.. ++.|+.+|.+. ...+.+|+||..++.. .|+...
T Consensus 210 Gidl~~~-----------~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~--~~~~~~v~nn~a~~N~~~G~~~n 276 (400)
T 1ru4_A 210 GFDLFDS-----------PQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ--AVGNHRITRSVAFGNVSKGFDQN 276 (400)
T ss_dssp SEECTTC-----------CSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT--CCCCCEEESCEEESCSSEEEECT
T ss_pred cEEEEec-----------CCCEEEEeEEEECCccccccccccccCCCCEEEeccC--CcCCEEEEeeEEECCcCcCEeec
Confidence 8877532 45689999988743 24578887653 4567889999988764 576553
Q ss_pred eecCCCCceecEEEEeeEecccceeEEEE
Q 011659 330 TAVGRGGFVKDVYVRRMTMKTMKWAFWIT 358 (480)
Q Consensus 330 s~~~~~g~v~nI~~~ni~~~~~~~~i~i~ 358 (480)
... .+++++|.++.+....+.+.
T Consensus 277 ~~~------~~~~i~nNt~~~N~~~~~~~ 299 (400)
T 1ru4_A 277 NNA------GGVTVINNTSYKNGINYGFG 299 (400)
T ss_dssp TCS------SCCEEESCEEESSSEEEEEC
T ss_pred CCC------CCEEEECeEEECCccceEEe
Confidence 221 23777777777666666664
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.07 E-value=9.8e-09 Score=106.64 Aligned_cols=209 Identities=7% Similarity=0.058 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecc------cccceEEEee-C-cEEEecCCCCCCCCCCCCCCCCcc
Q 011659 68 NTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNL------TSHFTLFLHK-D-AVLLASQDEKEWPVIEPLPSYGRG 139 (480)
Q Consensus 68 dT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l------~sn~~l~~~~-g-a~i~~~~~~~~~~~~~~~~~~~~g 139 (480)
+.+.||+|++.| .+|.+|++++|+|.-..+.+ ...++|.-+. + ++|.+.
T Consensus 30 ~~~~Lq~Ai~~A-----~pGDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------------------ 86 (506)
T 1dbg_A 30 SNETLYQVVKEV-----KPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------------------ 86 (506)
T ss_dssp SHHHHHHHHHHC-----CTTCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------------------
T ss_pred CHHHHHHHHHhC-----CCCCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCC------------------
Confidence 456799999987 46899999999997545555 2344544331 1 222221
Q ss_pred ccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCCCc-eEEEe
Q 011659 140 RDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSPSW-NVHPV 218 (480)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~~~-~i~~~ 218 (480)
..+.. ..++++|+| -+|.+.+..... .. ...+..+.+. .++++|++++|.+...- .+.+.
T Consensus 87 ---------~~l~i-~g~~v~i~G--L~i~~~~~~~~~-~~-----~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~ 147 (506)
T 1dbg_A 87 ---------AKVEL-RGEHLILEG--IWFKDGNRAIQA-WK-----SHGPGLVAIY-GSYNRITACVFDCFDEANSAYIT 147 (506)
T ss_dssp ---------CEEEE-CSSSEEEES--CEEEEECCCTTT-CC-----TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEE
T ss_pred ---------ceEEE-EcCCEEEEC--eEEECCCcceee-ee-----cccccceEEe-cCCeEEEeeEEEcCCCCceeeEe
Confidence 01111 225556666 344432210000 00 0012233333 58889999999886431 13332
Q ss_pred --------ccccEEEEeEEEECCCCCCCCC----eEecCC-------CccEEEEecEEeeCC------ceeeecCCCCcc
Q 011659 219 --------YSSSVIVQGITILAPVTSPNTD----GINPDS-------CTNTRIEDCYIVSGD------DCVAVKSGWDQY 273 (480)
Q Consensus 219 --------~~~nv~i~~~~i~~~~~~~n~D----GI~~~~-------s~nV~I~n~~i~~gd------D~iai~sg~~~~ 273 (480)
..++.+|++++|.+........ ||++.. +.+.+|+|+.|...+ +.+.++.
T Consensus 148 ~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~----- 222 (506)
T 1dbg_A 148 TSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGY----- 222 (506)
T ss_dssp ECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECS-----
T ss_pred ecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEE-----
Confidence 5667789999999854333333 787775 358899999998643 2222221
Q ss_pred CcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCceEEEEe
Q 011659 274 GIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKT 330 (480)
Q Consensus 274 g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s 330 (480)
..+.+.+.+|+++.|...+ .|.+|=+. ...+.+|+++++.+...++.+..
T Consensus 223 ---h~m~s~~~~VenN~f~~~~-gg~aim~s---kS~~n~i~~N~~~~~~ggi~l~~ 272 (506)
T 1dbg_A 223 ---YRNDIGRCLVDSNLFMRQD-SEAEIITS---KSQENVYYGNTYLNCQGTMNFRH 272 (506)
T ss_dssp ---STTCBCCCEEESCEEEEEC-SSSEEEEE---ESBSCEEESCEEESCSSEEEEEE
T ss_pred ---EecccCCcEEECCEEEecc-CcEEEEEE---ecCCEEEECCEEEcccCcEEEee
Confidence 1134678888888888654 23333110 11135777777777766665543
No 41
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.64 E-value=1e-06 Score=87.54 Aligned_cols=86 Identities=20% Similarity=0.136 Sum_probs=56.1
Q ss_pred CCCCeEecCCCccEEEEecEEeeC---CceeeecCCCC---ccC-cccCCCceeEEEEEEEEeCCCcceEEEcccccC--
Q 011659 237 PNTDGINPDSCTNTRIEDCYIVSG---DDCVAVKSGWD---QYG-IAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG-- 307 (480)
Q Consensus 237 ~n~DGI~~~~s~nV~I~n~~i~~g---dD~iai~sg~~---~~g-~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~-- 307 (480)
...|+|.+..++||.|++|.|..+ |++.....|.. .+| ......+.+|+|+||+|...+ -+.-+|+....
T Consensus 131 ~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~-k~~LiG~sd~~~~ 209 (355)
T 1pcl_A 131 AEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHD-KTILIGHSDSNGS 209 (355)
T ss_pred ccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCC-ceEEeCCCCCCcc
Confidence 357899999999999999999864 22222222211 011 112224899999999999655 57777875321
Q ss_pred ---ceeEEEEEeeEEeCCC
Q 011659 308 ---GIQDVRAEDITAIDSE 323 (480)
Q Consensus 308 ---~v~nI~v~n~~~~~~~ 323 (480)
+..+|++.+|.|.+..
T Consensus 210 ~d~g~~~vT~hhN~f~~~~ 228 (355)
T 1pcl_A 210 QDSGKLRVTFHNNVFDRVT 228 (355)
T ss_pred cccCcceEEEECcEEeCCc
Confidence 3457999999997764
No 42
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.63 E-value=6.2e-07 Score=89.20 Aligned_cols=70 Identities=13% Similarity=0.110 Sum_probs=42.6
Q ss_pred CCCeEecCCCccEEEEecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC---------c--ceEEEcccc
Q 011659 238 NTDGINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF---------S--AVIALGSEM 305 (480)
Q Consensus 238 n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~---------~--~gi~igs~~ 305 (480)
..|+|.+..++||.|++|.+.. +|..+.... ..+.+|+|+||.|.... + .++-+|+
T Consensus 152 g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~----------~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~-- 219 (359)
T 1idk_A 152 GGDAITLDDCDLVWIDHVTTARIGRQHYVLGT----------SADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGD-- 219 (359)
T ss_dssp SCCSEEECSCEEEEEESCEEEEESSCSEEECC----------CTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCS--
T ss_pred cCCceeecCCCcEEEEeeEeecCCCCcEEecc----------cCcceEEEECcEecCCcccccccCccccceEEEEec--
Confidence 4577888778888888888865 444443311 12678888888886321 0 1222232
Q ss_pred cCceeEEEEEeeEEeCC
Q 011659 306 SGGIQDVRAEDITAIDS 322 (480)
Q Consensus 306 ~~~v~nI~v~n~~~~~~ 322 (480)
..++++.++.|.+.
T Consensus 220 ---sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 220 ---ADLVTMKGNYIYHT 233 (359)
T ss_dssp ---SCEEEEESCEEESB
T ss_pred ---CCCeEEEceEeecC
Confidence 23788888888654
No 43
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.57 E-value=1.9e-06 Score=85.83 Aligned_cols=69 Identities=14% Similarity=0.175 Sum_probs=38.6
Q ss_pred EEEE-eeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeee-cC
Q 011659 192 IEIM-YSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAV-KS 268 (480)
Q Consensus 192 i~~~-~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai-~s 268 (480)
|.+. .++||.|++++|++.... .....|+|.+..++||.|++|.+.. +|..+.. ..
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~---------------------~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~ 184 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPK---------------------YVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTS 184 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTT---------------------EETSCCSEEEESCCCEEEESCEEEEESSCSEEECSS
T ss_pred EEEecCCCCEEEeCcEEEecCCc---------------------ccccCceeEecCCceEEEEeeEeeccCcCceeeccc
Confidence 5555 566666666666654210 0123466777667777777777754 3333311 11
Q ss_pred CCCccCcccCCCceeEEEEEEEEe
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCI 292 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~ 292 (480)
.+.+|+|+||.|.
T Consensus 185 -----------~s~~vTISnn~f~ 197 (359)
T 1qcx_A 185 -----------ADNRVTISYSLID 197 (359)
T ss_dssp -----------CCEEEEEESCEEE
T ss_pred -----------ccccEEEECcEec
Confidence 2667777777776
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.51 E-value=1.2e-06 Score=86.29 Aligned_cols=73 Identities=10% Similarity=0.055 Sum_probs=42.4
Q ss_pred CCCeEecC-----CCccEEEEecEEeeC------------CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEE
Q 011659 238 NTDGINPD-----SCTNTRIEDCYIVSG------------DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300 (480)
Q Consensus 238 n~DGI~~~-----~s~nV~I~n~~i~~g------------dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~ 300 (480)
..|+|.+. .++||.|++|.+..+ |..+.++ .++.+|+|+||+|...+ .++-
T Consensus 112 ~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~-----------~~s~~VTISnn~f~~h~-k~~L 179 (330)
T 2qy1_A 112 DADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMK-----------KGVHHVTVSYNYVYNYQ-KVAL 179 (330)
T ss_dssp GCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEE-----------SSCEEEEEESCEEEEEE-ECCE
T ss_pred CCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccc-----------cCcceEEEEcceeccCC-eEEE
Confidence 45667766 467777777777532 2222322 23778888888887543 4555
Q ss_pred EcccccC---ceeEEEEEeeEEeCC
Q 011659 301 LGSEMSG---GIQDVRAEDITAIDS 322 (480)
Q Consensus 301 igs~~~~---~v~nI~v~n~~~~~~ 322 (480)
+|+.... ...+|++.++.|.+.
T Consensus 180 ~G~sd~~~~~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 180 NGYSDSDTKNSAARTTYHHNRFENV 204 (330)
T ss_dssp ESSSTTCGGGGGCEEEEESCEEEEE
T ss_pred ECCCCccccCCCceEEEECcEEcCC
Confidence 6653211 124777777777654
No 45
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.51 E-value=1.4e-06 Score=86.34 Aligned_cols=112 Identities=16% Similarity=0.120 Sum_probs=74.7
Q ss_pred EEEEeeecEEEEeEEEEeCC-CceEEE-eccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCcee-eecC
Q 011659 192 IEIMYSQNIQISNLTLINSP-SWNVHP-VYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCV-AVKS 268 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~-~~~i~~-~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~i-ai~s 268 (480)
|.+..++||.|++++|++.. .+.-.+ ..... .. + .. .....|||.+.++++|.|++|.|..+.|++ .++.
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~-~~-g--~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI-GV-E--PV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTT-EE-E--EE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCc-cc-c--cc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 66677888999999988753 111101 00000 00 0 01 135689999999999999999998877765 4543
Q ss_pred CCCccCcccCCCceeEEEEEEEEeCCCcceEEEccccc---CceeEEEEEeeEE-eCC
Q 011659 269 GWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMS---GGIQDVRAEDITA-IDS 322 (480)
Q Consensus 269 g~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~---~~v~nI~v~n~~~-~~~ 322 (480)
+ +++|+|+||.|..-+ .++-+|+... ....+|++.++.| .+.
T Consensus 181 ~-----------s~~vTISnn~f~~H~-k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 G-----------STGITISNNHFFNHH-KVMLLGHDDTYDDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp S-----------CEEEEEESCEEESEE-EEEEESCCSSCGGGGGCEEEEESCEECSSE
T ss_pred C-----------cceEEEEeeEEecCC-ceeEECCCCccccCCceEEEEEeeEEeCCc
Confidence 3 899999999999644 5778877532 1235899999999 554
No 46
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.47 E-value=7.4e-06 Score=80.52 Aligned_cols=74 Identities=18% Similarity=0.131 Sum_probs=48.5
Q ss_pred CCCeEecCCCccEEEEecEEeeC-CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC------cee
Q 011659 238 NTDGINPDSCTNTRIEDCYIVSG-DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG------GIQ 310 (480)
Q Consensus 238 n~DGI~~~~s~nV~I~n~~i~~g-dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~------~v~ 310 (480)
..|+|.+..++||.|++|.+..+ |..+.++.+ +.+|+|+||.|...+ .+.-+|+.... +..
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~-----------s~~vTISnn~f~~h~-k~~LiG~sd~~~~~~d~g~~ 182 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKY-----------SNYITVSWNKFVDHD-KVSLVGSSDKEDPEQAGQAY 182 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETT-----------CEEEEEESCEEESCS-BCCEECCCTTSCHHHHHHSC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecC-----------CceEEEECcEeccCc-eeeEeCcCCCCccccccCCc
Confidence 56778777778888888887764 444566543 678888888887654 45666654321 124
Q ss_pred EEEEEeeEEeCCC
Q 011659 311 DVRAEDITAIDSE 323 (480)
Q Consensus 311 nI~v~n~~~~~~~ 323 (480)
+|++.++.|.+..
T Consensus 183 ~vT~hhN~f~~~~ 195 (340)
T 3zsc_A 183 KVTYHHNYFKNLI 195 (340)
T ss_dssp EEEEESCEEESCC
T ss_pred EEEEECeEecCCC
Confidence 6778877776653
No 47
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.42 E-value=3.3e-06 Score=83.69 Aligned_cols=132 Identities=10% Similarity=-0.003 Sum_probs=80.6
Q ss_pred eecEEEEeE----EEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCe-EecCCCccEEEEecEEeeCCceeeecCCCC
Q 011659 197 SQNIQISNL----TLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDG-INPDSCTNTRIEDCYIVSGDDCVAVKSGWD 271 (480)
Q Consensus 197 ~~nv~I~~v----~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DG-I~~~~s~nV~I~n~~i~~gdD~iai~sg~~ 271 (480)
.++++|.+. .|.. ...++.+..++||.|++++|+... +...+ |.-..-.+. ...-...+|+|.+..
T Consensus 87 ~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~--~~~~~~I~~~~~~~~---g~~~~~~~DaI~i~~--- 157 (346)
T 1pxz_A 87 AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCN--TSVLGDVLVSESIGV---EPVHAQDGDAITMRN--- 157 (346)
T ss_dssp CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCC--CCCSEEEEEETTTEE---EEECCCCCCSEEEES---
T ss_pred cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeec--cCCCceEEeccCccc---ccccCCCCCEEEEec---
Confidence 346777663 2221 135788888999999999998642 11111 100000000 011124678888864
Q ss_pred ccCcccCCCceeEEEEEEEEeCCCcceE-EEcccccCceeEEEEEeeEEeCCCceEEEEeecCCC-CceecEEEEeeEe-
Q 011659 272 QYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDVYVRRMTM- 348 (480)
Q Consensus 272 ~~g~~~~~~~~ni~I~n~~~~~~~~~gi-~igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~-g~v~nI~~~ni~~- 348 (480)
++||.|.+|++.... +|+ .+. ...++|+|+||.|.+...++.+.+..... ....+|+|.+..+
T Consensus 158 ---------s~nVwIDHcs~s~~~-Dg~id~~----~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~ 223 (346)
T 1pxz_A 158 ---------VTNAWIDHNSLSDCS-DGLIDVT----LGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFG 223 (346)
T ss_dssp ---------CEEEEEESCEEECCS-SEEEEEE----SSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEEC
T ss_pred ---------CceEEEEeeEEecCC-CCcEeec----cCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEe
Confidence 799999999999876 676 453 25789999999999876677675432111 1234678888887
Q ss_pred ccc
Q 011659 349 KTM 351 (480)
Q Consensus 349 ~~~ 351 (480)
.+.
T Consensus 224 ~~~ 226 (346)
T 1pxz_A 224 PNA 226 (346)
T ss_dssp SSE
T ss_pred CCc
Confidence 554
No 48
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.40 E-value=3.7e-05 Score=72.31 Aligned_cols=176 Identities=16% Similarity=0.223 Sum_probs=117.7
Q ss_pred ceeEEEeecCcCCCCcchhHHHHHHHHHHhhhcccCCCcEEEeCCCeeeeeeecccccceEEEeeCcEEEecCCCCCCCC
Q 011659 50 AHSASLEEFGGVGDGTTSNTKAFKAAIDHLSRFQSEGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAVLLASQDEKEWPV 129 (480)
Q Consensus 50 ~~~~nV~dfGA~gDg~tddT~Aiq~Ai~~~~~~~~~~g~~v~iP~G~Y~~~~l~l~sn~~l~~~~ga~i~~~~~~~~~~~ 129 (480)
+.++.+++|||.+|-.+||+.+|.+.+..- .-|.+|.|.|-..-+.+ +.+.|+...+++|.--....+|..
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s~--------~~v~i~~gvf~ss~i~~-~~c~l~g~g~g~~~~~~~~gn~lv 132 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNSQ--------KAVTISDGVFSSSGINS-NYCNLDGRGSGVLSHRSSTGNYLV 132 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTSS--------SCEECCSEEEEECCEEE-SCCEEECTTTEEEEECSSSSCCEE
T ss_pred heeeecccccccCCcccCcHHHHHhhhccc--------ccEeccccccccccccc-ccccccccCCceeeeecCCCCEEE
Confidence 457889999999999999999999998743 35999999997644333 456788777888875443333322
Q ss_pred CCCCCCCCccccCCCCcceeeEEEeceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEe
Q 011659 130 IEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLIN 209 (480)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~i~~~~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~n 209 (480)
++ +-..-...+++|.|. - .......+.+.|....+|+++++.+.|
T Consensus 133 fn------------------~p~~g~ls~~ti~~n-k----------------~~ds~qg~qvs~~gg~dvsv~~i~fsn 177 (542)
T 2x3h_A 133 FN------------------NPRTGRLSNITVESN-K----------------ATDTTQGQQVSLAGGSDVTVSDVNFSN 177 (542)
T ss_dssp EE------------------SCEEEEEEEEEEECC-C----------------SSTTCBCCSEEEESCEEEEEEEEEEEE
T ss_pred Ee------------------CCCCcceeeEEEecc-c----------------CCccccceEEEecCCCcceEeeeeeee
Confidence 11 001223567888874 1 011233446889999999999999999
Q ss_pred CCCceEEEec------cccEEEEeEEEECCCCCCC-CCeEe-cCCCccEEEEecEEee--CCceeeecCC
Q 011659 210 SPSWNVHPVY------SSSVIVQGITILAPVTSPN-TDGIN-PDSCTNTRIEDCYIVS--GDDCVAVKSG 269 (480)
Q Consensus 210 s~~~~i~~~~------~~nv~i~~~~i~~~~~~~n-~DGI~-~~~s~nV~I~n~~i~~--gdD~iai~sg 269 (480)
...-++.+.. -+...|++++=.-.....| .-|.. +++++|-+|++...++ .-.++.+|..
T Consensus 178 ~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~ 247 (542)
T 2x3h_A 178 VKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT 247 (542)
T ss_dssp ECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT
T ss_pred cCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc
Confidence 8776665431 2456777777665444333 23443 5688899999888877 4456666653
No 49
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.38 E-value=2.2e-05 Score=76.82 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=89.2
Q ss_pred eeecEEEEeEEEEeCCC------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCC
Q 011659 196 YSQNIQISNLTLINSPS------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg 269 (480)
.+++++++|++|+|+.. -.+.+ .++++.|.+|+|.. +.|++.....+. .+++|.|...-|-|- .
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G-- 161 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNRQ-FFINCFIAGTVDFIF-G-- 161 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE-E--
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCccE-EEEecEEEeeeeEEe-c--
Confidence 47899999999999742 34554 68899999999996 467888876664 899999997666443 2
Q ss_pred CCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-Cce
Q 011659 270 WDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-GFV 338 (480)
Q Consensus 270 ~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g~v 338 (480)
.....++||++.... ...|..-+ .....-..+.|.||++.+..... ..+++-|+. +.-
T Consensus 162 -----------~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~ 230 (319)
T 1gq8_A 162 -----------NAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEY 230 (319)
T ss_dssp -----------SCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTT
T ss_pred -----------CCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCc
Confidence 234788999887532 11233322 22345668899999998764210 001222222 344
Q ss_pred ecEEEEeeEeccc
Q 011659 339 KDVYVRRMTMKTM 351 (480)
Q Consensus 339 ~nI~~~ni~~~~~ 351 (480)
..++|.+..|.+.
T Consensus 231 sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 231 SRTVVMQSSITNV 243 (319)
T ss_dssp CEEEEESCEECTT
T ss_pred ceEEEEeccCCCc
Confidence 6788888888874
No 50
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.35 E-value=1.9e-05 Score=77.25 Aligned_cols=135 Identities=11% Similarity=0.105 Sum_probs=88.7
Q ss_pred eeecEEEEeEEEEeCCC------ceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCC
Q 011659 196 YSQNIQISNLTLINSPS------WNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG 269 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~------~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg 269 (480)
.+++++++|++|+|+.. -.+.+ .++++.+.+|+|.. +.|++.....++ .+++|.|...-|-|- .
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G-- 157 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTGTVDFIF-G-- 157 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE-E--
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEeceeEEc-C--
Confidence 67899999999999742 34554 68899999999996 467888876665 889999987666442 1
Q ss_pred CCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcc-cccCceeEEEEEeeEEeCCCceE----EEEeecCCC-Cce
Q 011659 270 WDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGS-EMSGGIQDVRAEDITAIDSESGV----RIKTAVGRG-GFV 338 (480)
Q Consensus 270 ~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs-~~~~~v~nI~v~n~~~~~~~~Gi----~i~s~~~~~-g~v 338 (480)
.....++||++.... ...|..-+ ..........|.||++.+..... ..+++-|+. +.-
T Consensus 158 -----------~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~ 226 (317)
T 1xg2_A 158 -----------NAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEY 226 (317)
T ss_dssp -----------CCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTT
T ss_pred -----------CceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCC
Confidence 234788899887522 12243322 22345668899999998754210 001121222 344
Q ss_pred ecEEEEeeEeccc
Q 011659 339 KDVYVRRMTMKTM 351 (480)
Q Consensus 339 ~nI~~~ni~~~~~ 351 (480)
..++|.+..|.+.
T Consensus 227 sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 227 SRTVVMESYLGGL 239 (317)
T ss_dssp CEEEEESCEECTT
T ss_pred ceEEEEecccCCc
Confidence 6788888888874
No 51
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.29 E-value=1e-05 Score=80.46 Aligned_cols=108 Identities=12% Similarity=0.096 Sum_probs=66.2
Q ss_pred eeecEEEEeEEEEeCCC--------------------ceEEEe-ccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEe
Q 011659 196 YSQNIQISNLTLINSPS--------------------WNVHPV-YSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~--------------------~~i~~~-~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n 254 (480)
.+++++++|++|+|+.. -.+.+. ..+...+.+|++.. ..|.+......+..+++
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~ 194 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFSD 194 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEES
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEEc
Confidence 57889999999998842 234444 47788888888885 35777766456677888
Q ss_pred cEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC-------cceEEEcccccCceeEEEEEeeEEeCC
Q 011659 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-------SAVIALGSEMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 255 ~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-------~~gi~igs~~~~~v~nI~v~n~~~~~~ 322 (480)
|.|...-|=|- + .-...++||++..-. ..-|.-.+.....-..+.|.||++.+.
T Consensus 195 c~I~GtvDFIF-G-------------~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 195 CEISGHVDFIF-G-------------SGITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp CEEEESEEEEE-E-------------SSEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred CEEEcCCCEEC-C-------------cceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 88886555332 1 234677777776321 012333222222334567777777654
No 52
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.20 E-value=1.4e-05 Score=78.24 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=48.3
Q ss_pred CCCCeEecCC-CccEEEEecEEee----------CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccc
Q 011659 237 PNTDGINPDS-CTNTRIEDCYIVS----------GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM 305 (480)
Q Consensus 237 ~n~DGI~~~~-s~nV~I~n~~i~~----------gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~ 305 (480)
...|+|.+.. ++||.|++|.+.. .|..+.++.+ +.+|+|+||.|..-+ .+.-+|+..
T Consensus 118 ~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~-----------s~~VTISnn~f~~h~-k~~LiG~sd 185 (326)
T 3vmv_A 118 GEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRN-----------AEYITVSWNKFENHW-KTMLVGHTD 185 (326)
T ss_dssp TTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTT-----------CEEEEEESCEEEEEE-ECEEECSSS
T ss_pred CCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCC-----------CceEEEEceEEecCc-eEEEECCCC
Confidence 3467777775 7788888888752 2334455443 788888888888544 566777643
Q ss_pred cC--ceeEEEEEeeEEeCC
Q 011659 306 SG--GIQDVRAEDITAIDS 322 (480)
Q Consensus 306 ~~--~v~nI~v~n~~~~~~ 322 (480)
.. .-.+|++.++.|.+.
T Consensus 186 ~~~~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 186 NASLAPDKITYHHNYFNNL 204 (326)
T ss_dssp CGGGCCEEEEEESCEEEEE
T ss_pred CCcccCccEEEEeeEecCC
Confidence 21 124788888888654
No 53
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.18 E-value=1.3e-05 Score=79.51 Aligned_cols=109 Identities=15% Similarity=0.067 Sum_probs=65.8
Q ss_pred ceEEEeccccEEEEeEEEECCCC-CCCCCeEecCCCccEEEEecEEeeC-Cceee-ecCCCCccC-cccCCCceeEEEEE
Q 011659 213 WNVHPVYSSSVIVQGITILAPVT-SPNTDGINPDSCTNTRIEDCYIVSG-DDCVA-VKSGWDQYG-IAYGMPTKQLIIRR 288 (480)
Q Consensus 213 ~~i~~~~~~nv~i~~~~i~~~~~-~~n~DGI~~~~s~nV~I~n~~i~~g-dD~ia-i~sg~~~~g-~~~~~~~~ni~I~n 288 (480)
.+|.+..++||.|+|++|+..+. ....|+|.+..++||.|++|.|..+ +.|.. .......+| .....++.+|+|+|
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 46666677777777777775321 2357888888888999999988753 11111 000000011 11123478999999
Q ss_pred EEEeCCCcceEEEcccccCceeEEEEEeeEEeCC
Q 011659 289 LTCISPFSAVIALGSEMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 289 ~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~ 322 (480)
|.|...+ .+.-+|+.......+|++.++.|.+.
T Consensus 183 n~f~~h~-k~~LiG~sd~~~g~~vT~hhN~f~~~ 215 (353)
T 1air_A 183 NYIHGVK-KVGLDGSSSSDTGRNITYHHNYYNDV 215 (353)
T ss_dssp CEEEEEE-ECCEESSSTTCCCCEEEEESCEEEEE
T ss_pred eEEcCCC-ceeEECCCcCCCCceEEEEceEEcCC
Confidence 9998544 34556665322226888888888664
No 54
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.17 E-value=1.8e-05 Score=78.61 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=52.8
Q ss_pred CCCeEecCC-CccEEEEecEEeeC------------------CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcce
Q 011659 238 NTDGINPDS-CTNTRIEDCYIVSG------------------DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV 298 (480)
Q Consensus 238 n~DGI~~~~-s~nV~I~n~~i~~g------------------dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g 298 (480)
..|+|.+.. ++||.|++|.|..+ |.++.++.+ +.+|+|++|+|..-. -+
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~-----------s~~VTiS~n~f~~h~-k~ 209 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRG-----------SDYVTISNSLIDQHD-KT 209 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTT-----------CEEEEEESCEEEEEE-EC
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecC-----------CCcEEEEeeEEcCCC-ce
Confidence 478899888 89999999999863 444555443 899999999998543 46
Q ss_pred EEEcccccC-----ceeEEEEEeeEEeCC
Q 011659 299 IALGSEMSG-----GIQDVRAEDITAIDS 322 (480)
Q Consensus 299 i~igs~~~~-----~v~nI~v~n~~~~~~ 322 (480)
+-+|+.... +-..|++.++.|.+.
T Consensus 210 ~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 210 MLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp EEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred eEecCCCCCcccccCcceEEEECeEEcCc
Confidence 667764321 234799999999754
No 55
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.10 E-value=2.6e-05 Score=76.65 Aligned_cols=141 Identities=13% Similarity=0.028 Sum_probs=96.9
Q ss_pred eceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeC-----------CCceEEEeccccEEE
Q 011659 157 TDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINS-----------PSWNVHPVYSSSVIV 225 (480)
Q Consensus 157 ~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns-----------~~~~i~~~~~~nv~i 225 (480)
..+.|.. +=+|+|++.+ . -....|.+.+++||.|++++|++. ...+|.+..++||.|
T Consensus 62 ~~l~v~s-nkTI~G~ga~--~---------I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWI 129 (340)
T 3zsc_A 62 REIKVLS-DKTIVGINDA--K---------IVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWI 129 (340)
T ss_dssp EEEEECS-SEEEEEEEEE--E---------EEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEE
T ss_pred ceEEecC-CCEEEeccCc--E---------EecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEE
Confidence 3577744 4699998864 0 012358888999999999999985 346799999999999
Q ss_pred EeEEEECCCCCCCCCe-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcc
Q 011659 226 QGITILAPVTSPNTDG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303 (480)
Q Consensus 226 ~~~~i~~~~~~~n~DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs 303 (480)
++|++... .|| +++. .+.+|+|++|.|...+-+.-+.+.. ..+........+|++.+|.+.+...+.-++..
T Consensus 130 DHcs~s~~-----~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd-~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~ 203 (340)
T 3zsc_A 130 DHITFVNG-----NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSD-KEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF 203 (340)
T ss_dssp ESCEEESC-----SSCSEEEETTCEEEEEESCEEESCSBCCEECCCT-TSCHHHHHHSCEEEEESCEEESCCBCTTEEES
T ss_pred EeeeeccC-----CccceEEecCCceEEEECcEeccCceeeEeCcCC-CCccccccCCcEEEEECeEecCCCCCCCcccC
Confidence 99999964 566 6665 6899999999999766555444321 11000000124899999999865433223321
Q ss_pred cccCceeEEEEEeeEEeC
Q 011659 304 EMSGGIQDVRAEDITAID 321 (480)
Q Consensus 304 ~~~~~v~nI~v~n~~~~~ 321 (480)
+ .+++-|+.+++
T Consensus 204 ----G--~~Hv~NN~~~n 215 (340)
T 3zsc_A 204 ----G--MAHVFNNFYSM 215 (340)
T ss_dssp ----S--EEEEESCEEEC
T ss_pred ----C--eEEEEccEEEC
Confidence 1 56889999998
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.03 E-value=2.9e-05 Score=77.04 Aligned_cols=146 Identities=11% Similarity=0.012 Sum_probs=95.2
Q ss_pred EEEEEeeecEEEEeEEEEeCC-----CceEEEeccccEEEEeEEEECCCCC--------CCCCe-Eec-CCCccEEEEec
Q 011659 191 LIEIMYSQNIQISNLTLINSP-----SWNVHPVYSSSVIVQGITILAPVTS--------PNTDG-INP-DSCTNTRIEDC 255 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~-----~~~i~~~~~~nv~i~~~~i~~~~~~--------~n~DG-I~~-~~s~nV~I~n~ 255 (480)
.|.+..++||.|++++|+..+ ...|.+..++||.|++|.+...... ...|| +++ ..+.+|+|++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 478889999999999999654 3679999999999999999864211 11255 455 37899999999
Q ss_pred EEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC-ceEEEEeecCC
Q 011659 256 YIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE-SGVRIKTAVGR 334 (480)
Q Consensus 256 ~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~-~Gi~i~s~~~~ 334 (480)
.|...+-..-+.+. +.++ ..+|++.+|.|.+...+.-++. .-.+++.|+.+++.. +++....
T Consensus 184 ~f~~h~k~~LiG~s-d~~~------g~~vT~hhN~f~~~~~R~Pr~r------~G~~Hv~NN~~~n~~~~~~~~~~---- 246 (353)
T 1air_A 184 YIHGVKKVGLDGSS-SSDT------GRNITYHHNYYNDVNARLPLQR------GGLVHAYNNLYTNITGSGLNVRQ---- 246 (353)
T ss_dssp EEEEEEECCEESSS-TTCC------CCEEEEESCEEEEEEECSCEEE------SSEEEEESCEEEEESSCSEEEET----
T ss_pred EEcCCCceeEECCC-cCCC------CceEEEEceEEcCCcCCCCCCc------CceEEEEccEEECCCCceeccCC----
Confidence 99875444333332 1111 1589999998875332222232 115778899888753 4554321
Q ss_pred CCceecEEEEeeEecccceeEE
Q 011659 335 GGFVKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 335 ~g~v~nI~~~ni~~~~~~~~i~ 356 (480)
+ ..|.+|+..+++...|+.
T Consensus 247 ~---~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 247 N---GQALIENNWFEKAINPVT 265 (353)
T ss_dssp T---CEEEEESCEEEEEESSEE
T ss_pred C---cEEEEEceEEECCCCceE
Confidence 1 235666666666556653
No 57
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.01 E-value=4e-05 Score=76.23 Aligned_cols=130 Identities=9% Similarity=0.073 Sum_probs=98.9
Q ss_pred ecEEEEeEEEEeC-----C------CceEEEec-cccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceee
Q 011659 198 QNIQISNLTLINS-----P------SWNVHPVY-SSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVA 265 (480)
Q Consensus 198 ~nv~I~~v~i~ns-----~------~~~i~~~~-~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~ia 265 (480)
++|+|++++|.+. . .-+|.+.. .++++|+++++.. +.-||.+..+++.+|+++.|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777766 3 23677875 8889999999996 5679999999999999999997778898
Q ss_pred ecCCCCccCcccCCCceeEEEEEEEEeCCCcce--EEEcccccCceeEEEEEeeEE-eCCCceEEEEeecCCCCceecEE
Q 011659 266 VKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV--IALGSEMSGGIQDVRAEDITA-IDSESGVRIKTAVGRGGFVKDVY 342 (480)
Q Consensus 266 i~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g--i~igs~~~~~v~nI~v~n~~~-~~~~~Gi~i~s~~~~~g~v~nI~ 342 (480)
+... ++...|+++.+.... +| |.+. ...+.+|+++.+ .....|+.+... .+..
T Consensus 211 L~G~-----------~~~~~I~~N~i~~~~-dG~gIyl~-----ns~~~~I~~N~i~~~~R~gIh~m~s-------~~~~ 266 (410)
T 2inu_A 211 LTGA-----------GQATIVSGNHMGAGP-DGVTLLAE-----NHEGLLVTGNNLFPRGRSLIEFTGC-------NRCS 266 (410)
T ss_dssp ECSC-----------EESCEEESCEEECCT-TSEEEEEE-----SEESCEEESCEECSCSSEEEEEESC-------BSCE
T ss_pred eccc-----------cccceEecceeeecC-CCCEEEEE-----eCCCCEEECCCcccCcceEEEEEcc-------CCCE
Confidence 8753 688899999999776 66 6654 678889999977 557889998654 2345
Q ss_pred EEeeEecccceeEE
Q 011659 343 VRRMTMKTMKWAFW 356 (480)
Q Consensus 343 ~~ni~~~~~~~~i~ 356 (480)
|++.++++...++.
T Consensus 267 i~~N~f~~~~~Gi~ 280 (410)
T 2inu_A 267 VTSNRLQGFYPGML 280 (410)
T ss_dssp EESCEEEESSSCSE
T ss_pred EECCEEecceeEEE
Confidence 55555555554443
No 58
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.00 E-value=2e-05 Score=79.69 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=66.6
Q ss_pred eEEEeccccEEEEeEEEECCCC---------------CCCCCeEecCCCccEEEEecEEeeC------------------
Q 011659 214 NVHPVYSSSVIVQGITILAPVT---------------SPNTDGINPDSCTNTRIEDCYIVSG------------------ 260 (480)
Q Consensus 214 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGI~~~~s~nV~I~n~~i~~g------------------ 260 (480)
+|.+..++||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 4555566677777777765321 1356899999999999999999864
Q ss_pred CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC----ceeEEEEEeeEEeCC
Q 011659 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG----GIQDVRAEDITAIDS 322 (480)
Q Consensus 261 dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~----~v~nI~v~n~~~~~~ 322 (480)
|..+.++. .+.+|+|++|+|...+ -+.-+|+.... +...|++.+|.|.+.
T Consensus 229 DGl~Di~~-----------~s~~VTISnn~f~~h~-k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKN-----------SSDFITISYNVFTNHD-KVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEES-----------SCEEEEEESCEEEEEE-ECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeec-----------CCCcEEEEeeEEcCCC-ceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 33344443 3899999999999644 46667765321 234699999998765
No 59
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.90 E-value=0.0006 Score=67.33 Aligned_cols=107 Identities=9% Similarity=0.115 Sum_probs=66.8
Q ss_pred eeecEEEEeEEEEeCCC--------------------ceEE-EeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEe
Q 011659 196 YSQNIQISNLTLINSPS--------------------WNVH-PVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIED 254 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns~~--------------------~~i~-~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n 254 (480)
.+++++++|++|+|+.. -.+. ...++++.+.+|+|.. ..|.+.... .+..++|
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~ 167 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSD 167 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECS-SEEEEES
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECC-CCEEEEc
Confidence 47899999999999751 1232 2467888888888885 456677764 3577888
Q ss_pred cEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc---------ceEEEcccccCceeEEEEEeeEEeCC
Q 011659 255 CYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS---------AVIALGSEMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 255 ~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~---------~gi~igs~~~~~v~nI~v~n~~~~~~ 322 (480)
|.|...-|-|- + .-...++||++..-.. .-|.-.+.....-..+.|.||++.+.
T Consensus 168 c~I~G~vDFIF-G-------------~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 168 CRISGTVDFIF-G-------------DGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp CEEEESEEEEE-E-------------SSEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred CEEEeceEEEe-C-------------CceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 88886655331 2 2346778887764210 12333222223344678888888765
No 60
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.89 E-value=3.9e-05 Score=77.23 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=67.3
Q ss_pred eEEEeccccEEEEeEEEECCCC---------------CCCCCeEecCCCccEEEEecEEeeC------------------
Q 011659 214 NVHPVYSSSVIVQGITILAPVT---------------SPNTDGINPDSCTNTRIEDCYIVSG------------------ 260 (480)
Q Consensus 214 ~i~~~~~~nv~i~~~~i~~~~~---------------~~n~DGI~~~~s~nV~I~n~~i~~g------------------ 260 (480)
+|.+.. +||.|+|++|+...+ ....|+|.+..++||.|++|.|..+
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 555656 777777777775421 1356899999999999999999864
Q ss_pred CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC----ceeEEEEEeeEEeCC
Q 011659 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG----GIQDVRAEDITAIDS 322 (480)
Q Consensus 261 dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~----~v~nI~v~n~~~~~~ 322 (480)
|..+.++. ++.+|+|+||+|.+-+ -+.-+|+.... +..+|++.+|.|.+.
T Consensus 223 Dgl~Di~~-----------~s~~VTISnn~f~~h~-k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 223 DGQTDASN-----------GANYITMSYNYYHDHD-KSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCSEEEET-----------TCEEEEEESCEEEEEE-ECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeec-----------cCCcEEEEeeEEcCCC-ceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 33344443 3899999999999644 46667764321 234799999998755
No 61
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.86 E-value=0.00018 Score=72.80 Aligned_cols=142 Identities=9% Similarity=-0.014 Sum_probs=98.7
Q ss_pred EEEEeeecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCC-ccEEEEecEEeeCC---------
Q 011659 192 IEIMYSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSC-TNTRIEDCYIVSGD--------- 261 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s-~nV~I~n~~i~~gd--------- 261 (480)
|.+ ..++++|++++|.++...+|.+.. ++.+|++|++... ...||.+... .+.+|+||.+....
T Consensus 110 i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~ 183 (400)
T 1ru4_A 110 FYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMA 183 (400)
T ss_dssp EEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSSC
T ss_pred EEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCccc
Confidence 555 788999999999998877898887 7889999999963 2349999864 48899999997632
Q ss_pred ceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC-------------ceEEE
Q 011659 262 DCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE-------------SGVRI 328 (480)
Q Consensus 262 D~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~-------------~Gi~i 328 (480)
|+++++.. ..++.+|++|+++....+|+.+-. ....++|+||..++.. .|+.+
T Consensus 184 dG~~~~~~----------~g~Gn~~~~~~~~~N~ddGidl~~----~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~l 249 (400)
T 1ru4_A 184 DGFGPKQK----------QGPGNRFVGCRAWENSDDGFDLFD----SPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKL 249 (400)
T ss_dssp CSEEECTT----------CCSCCEEESCEEESCSSCSEECTT----CCSCCEEESCEEESTTCCCSCCTTCCCCCCSEEC
T ss_pred ceEEEEec----------ccCCeEEECCEEeecCCCcEEEEe----cCCCEEEEeEEEECCccccccccccccCCCCEEE
Confidence 45555532 137789999999876557888742 3345799999987653 22322
Q ss_pred EeecCCCCceecEEEEeeEecc-cceeEEE
Q 011659 329 KTAVGRGGFVKDVYVRRMTMKT-MKWAFWI 357 (480)
Q Consensus 329 ~s~~~~~g~v~nI~~~ni~~~~-~~~~i~i 357 (480)
.. .....+.+++|+...+ ...+|..
T Consensus 250 gg----~~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 250 GG----NQAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp CC----TTCCCCCEEESCEEESCSSEEEEC
T ss_pred ec----cCCcCCEEEEeeEEECCcCcCEee
Confidence 11 1233456677666655 3455544
No 62
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.74 E-value=0.00025 Score=71.65 Aligned_cols=123 Identities=13% Similarity=0.002 Sum_probs=82.2
Q ss_pred EEEEEeeecEEEEeEEEEeC-------------------CCceEEEeccccEEEEeEEEECCCCC------------CCC
Q 011659 191 LIEIMYSQNIQISNLTLINS-------------------PSWNVHPVYSSSVIVQGITILAPVTS------------PNT 239 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~~------------~n~ 239 (480)
.|.+..++||.|+||+|++. ...+|.+..++||.|++|++....+. ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47888999999999999863 23679999999999999999964210 114
Q ss_pred Ce-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEee
Q 011659 240 DG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317 (480)
Q Consensus 240 DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~ 317 (480)
|| +++. .+.+|+|++|.|...+-+.-+.+. +.+. ....--+|++.+|.|.+...+.-++. .+ .+++-|+
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~VT~hhN~f~~~~~R~Pr~R----~G--~~Hv~NN 299 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGAS-DSRM--ADSGHLRVTLHHNYYKNVTQRLPRVR----FG--QVHIYNN 299 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSC-TTCG--GGTTCCCEEEESCEEEEEEECSSEES----SC--EEEEESC
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCC-CCCc--ccCCceEEEEECcEecCCccCCcccc----cc--eEEEEcc
Confidence 55 4454 689999999999976555444432 1110 11112479999998874332222231 11 4889999
Q ss_pred EEeCC
Q 011659 318 TAIDS 322 (480)
Q Consensus 318 ~~~~~ 322 (480)
.+++.
T Consensus 300 ~~~n~ 304 (416)
T 1vbl_A 300 YYEFS 304 (416)
T ss_dssp EEEEC
T ss_pred eEECC
Confidence 99864
No 63
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.73 E-value=0.00073 Score=67.07 Aligned_cols=171 Identities=12% Similarity=0.061 Sum_probs=103.9
Q ss_pred ceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEE-eeecEEEEeEEEEeC------CCceEEEeccccEEEEeEEE
Q 011659 158 DVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIM-YSQNIQISNLTLINS------PSWNVHPVYSSSVIVQGITI 230 (480)
Q Consensus 158 nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~-~~~nv~I~~v~i~ns------~~~~i~~~~~~nv~i~~~~i 230 (480)
.+.|.. +=+|+|+|..- .-....|.+. .++||.|++++|++. ...+|.+..+++|.|++|++
T Consensus 103 ~l~v~s-nkTI~G~G~~~----------~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~ 171 (359)
T 1idk_A 103 GITVTS-NKSLIGEGSSG----------AIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTT 171 (359)
T ss_dssp CEEECS-SEEEEECTTTC----------EEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEE
T ss_pred eEEeCC-CceEEEecCCe----------EEecceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEe
Confidence 466644 46999987410 0112247777 899999999999983 23678999999999999999
Q ss_pred ECCCCCCCCCeEe---cCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccC
Q 011659 231 LAPVTSPNTDGIN---PDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSG 307 (480)
Q Consensus 231 ~~~~~~~n~DGI~---~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~ 307 (480)
... .|+.. ...+.+|+|++|.|...++--+-..+...++....+.+.++++.+|.+.+...+.-++.
T Consensus 172 s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r----- 241 (359)
T 1idk_A 172 ARI-----GRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ----- 241 (359)
T ss_dssp EEE-----SSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC-----
T ss_pred ecC-----CCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc-----
Confidence 863 33333 45788999999999853321000000011111122235689999999985432222221
Q ss_pred ceeEEEEEeeEEeCCC-ceEEEEeecCCCCceecEEEEeeEecccceeEE
Q 011659 308 GIQDVRAEDITAIDSE-SGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 308 ~v~nI~v~n~~~~~~~-~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~ 356 (480)
.-+.+++.|+.+++.. +++.+.. -..+.+|+..+++...|+.
T Consensus 242 ~g~~~hv~NN~~~n~~~~~i~~~~-------~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 242 DNTLLHAVNNYWYDISGHAFEIGE-------GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp TTCEEEEESCEEEEEEEEEEEECT-------TCEEEEESCEEEEEEEEEE
T ss_pred CCceEEEECCEEecccceEEeccC-------CcEEEEEccEEECCCCcee
Confidence 1235888888887642 4444321 1356777777776666554
No 64
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.67 E-value=0.00098 Score=65.13 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=94.2
Q ss_pred eeceEEeCc--cceEeCCChhhhhhhccCCCCcCCCeEEEEEeeecEEEEeEEEEeCC---CceEEEec-cccEEEEeEE
Q 011659 156 LTDVVITGD--NGTIDGQGELWWRKFRAGELKYTRPYLIEIMYSQNIQISNLTLINSP---SWNVHPVY-SSSVIVQGIT 229 (480)
Q Consensus 156 ~~nv~I~G~--~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~~~~nv~I~~v~i~ns~---~~~i~~~~-~~nv~i~~~~ 229 (480)
..|++|.|. +.+|+|.| |.+..++||.|++++|++.. ..+|.+.. +++|.|++|+
T Consensus 78 ~sn~TI~G~g~~~~i~G~g-------------------l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s 138 (326)
T 3vmv_A 78 IKNISIIGVGTNGEFDGIG-------------------IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNE 138 (326)
T ss_dssp EEEEEEEECTTCCEEESCC-------------------EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCE
T ss_pred CCCeEEEecCCCeEEeCcE-------------------EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeE
Confidence 467888875 12455443 77889999999999999864 46799997 9999999999
Q ss_pred EECCC----CCCCCCe-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcc
Q 011659 230 ILAPV----TSPNTDG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS 303 (480)
Q Consensus 230 i~~~~----~~~n~DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs 303 (480)
+.... +....|| +++. .+.+|+|++|.|...+-+.-+.+. +... . .-.+|++.+|.+.+...+.-++.
T Consensus 139 ~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~--~~~~vT~~~N~f~~~~~R~Pr~r- 212 (326)
T 3vmv_A 139 FYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHT-DNAS--L--APDKITYHHNYFNNLNSRVPLIR- 212 (326)
T ss_dssp EECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSS-SCGG--G--CCEEEEEESCEEEEEEECTTEEE-
T ss_pred EeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCC-CCCc--c--cCccEEEEeeEecCCcCcCCccc-
Confidence 98532 1122354 4554 588999999999875554444432 1110 0 02478998888874322222222
Q ss_pred cccCceeEEEEEeeEEeCCC-ceEEE
Q 011659 304 EMSGGIQDVRAEDITAIDSE-SGVRI 328 (480)
Q Consensus 304 ~~~~~v~nI~v~n~~~~~~~-~Gi~i 328 (480)
.-.+++-|+.+++.. .++..
T Consensus 213 -----~G~~Hv~NN~~~n~~~~~~~~ 233 (326)
T 3vmv_A 213 -----YADVHMFNNYFKDINDTAINS 233 (326)
T ss_dssp -----SCEEEEESCEEEEESSCSEEE
T ss_pred -----CCcEEEEccEEECCCceEEee
Confidence 115788899988753 56544
No 65
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.66 E-value=0.00088 Score=66.53 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=34.1
Q ss_pred CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcce-EEEcccccCceeEEEEEeeEEeCC
Q 011659 260 GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAV-IALGSEMSGGIQDVRAEDITAIDS 322 (480)
Q Consensus 260 gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~g-i~igs~~~~~v~nI~v~n~~~~~~ 322 (480)
++|+|.+.. ++||.|.+|.+.... ++ +..+. ....+|+|+||.|.+.
T Consensus 152 ~~DaI~i~~------------s~nvwIDHcs~s~~~-d~~~~~~~---~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 152 GGDAITVDD------------SDLVWIDHVTTARIG-RQHIVLGT---SADNRVTISYSLIDGR 199 (359)
T ss_dssp SCCSEEEES------------CCCEEEESCEEEEES-SCSEEECS---SCCEEEEEESCEEECB
T ss_pred cCceeEecC------------CceEEEEeeEeeccC-cCceeecc---cccccEEEECcEecCC
Confidence 467787764 799999999998654 34 33332 2578999999999864
No 66
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.63 E-value=0.00027 Score=71.11 Aligned_cols=123 Identities=13% Similarity=0.073 Sum_probs=81.2
Q ss_pred EEEEEeeecEEEEeEEEEeC-------------------CCceEEEeccccEEEEeEEEECCCCC------------CCC
Q 011659 191 LIEIMYSQNIQISNLTLINS-------------------PSWNVHPVYSSSVIVQGITILAPVTS------------PNT 239 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns-------------------~~~~i~~~~~~nv~i~~~~i~~~~~~------------~n~ 239 (480)
.|.+.. +||.|+|++|++. ...+|.+..++||.|++|++....+. ...
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 377777 9999999999753 23678999999999999999964210 114
Q ss_pred Ce-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEee
Q 011659 240 DG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317 (480)
Q Consensus 240 DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~ 317 (480)
|| +++. .+.+|+|++|.|...+-+.-+.+. +.+. ....-.+|++.+|.|.+...+.-++. .+ .+++-|+
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~s-d~~~--~d~g~~~vT~h~N~f~~~~~R~Pr~R----~G--~~Hv~NN 293 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSS-DSKT--SDDGKLKITLHHNRYKNIVQAAPRVR----FG--QVHVYNN 293 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCC-TTCG--GGTTCCCEEEESCEEEEEEECTTEES----SC--EEEEESC
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCC-CCCc--cccCceeEEEECcEecCCcccCCCcc----cc--eEEEEcc
Confidence 55 3554 689999999999976554444432 1111 11113479999998874332222232 12 4889999
Q ss_pred EEeCCC
Q 011659 318 TAIDSE 323 (480)
Q Consensus 318 ~~~~~~ 323 (480)
.+++..
T Consensus 294 ~~~n~~ 299 (399)
T 2o04_A 294 YYEGST 299 (399)
T ss_dssp EEECCT
T ss_pred eEECCC
Confidence 997653
No 67
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.60 E-value=0.00093 Score=66.22 Aligned_cols=124 Identities=14% Similarity=0.063 Sum_probs=83.5
Q ss_pred EEEEEeeecEEEEeEEEEeCC---------------CceEEEeccccEEEEeEEEECCCC---------CC---CCCe-E
Q 011659 191 LIEIMYSQNIQISNLTLINSP---------------SWNVHPVYSSSVIVQGITILAPVT---------SP---NTDG-I 242 (480)
Q Consensus 191 ~i~~~~~~nv~I~~v~i~ns~---------------~~~i~~~~~~nv~i~~~~i~~~~~---------~~---n~DG-I 242 (480)
.|.+..++||.|+|++|++.. ..+|.+..+++|.|++|++....+ +. ..|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 377788999999999998641 357899999999999999996421 01 1465 4
Q ss_pred ecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeC
Q 011659 243 NPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAID 321 (480)
Q Consensus 243 ~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~ 321 (480)
++. .+.+|+|++|.|...+-+.-+.+. +.+. .......+|++.+|.|.+...+.-++. .+ .+++-|+.+++
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~-~~d~g~~~vT~hhN~f~~~~~R~PrvR----~G--~~Hv~NN~~~~ 248 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHS-DSNG-SQDSGKLRVTFHNNVFDRVTERAPRVR----FG--SIHAYNNVYLG 248 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCC-CCCc-ccccCcceEEEECcEEeCCcccCCcee----cc--eEEEEcceEEc
Confidence 454 689999999999986665555442 1110 001123479999999986543332331 11 37889999876
Q ss_pred C
Q 011659 322 S 322 (480)
Q Consensus 322 ~ 322 (480)
.
T Consensus 249 ~ 249 (355)
T 1pcl_A 249 D 249 (355)
T ss_pred c
Confidence 4
No 68
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.45 E-value=0.00049 Score=67.65 Aligned_cols=166 Identities=17% Similarity=0.140 Sum_probs=104.7
Q ss_pred ceeceEEeCccceEeCCChhhhhhhccCCCCcCCCeEEEEE-eeecEEEEeEEEEeCC----CceEEEe-----ccccEE
Q 011659 155 NLTDVVITGDNGTIDGQGELWWRKFRAGELKYTRPYLIEIM-YSQNIQISNLTLINSP----SWNVHPV-----YSSSVI 224 (480)
Q Consensus 155 ~~~nv~I~G~~G~idG~g~~~w~~~~~~~~~~~~p~~i~~~-~~~nv~I~~v~i~ns~----~~~i~~~-----~~~nv~ 224 (480)
-..|++|.|.++.|.|. .|.+. .++||.|++++|++.. ..+|.+. .++||.
T Consensus 70 v~sn~TI~G~~a~i~g~-------------------gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVW 130 (330)
T 2qy1_A 70 NKSDVTIKGANGSAANF-------------------GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIW 130 (330)
T ss_dssp SCCSEEEEECTTCBBSS-------------------EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEE
T ss_pred cCCCeEEECCCcEEeee-------------------eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEE
Confidence 35788888753334332 47888 8999999999999874 5789998 599999
Q ss_pred EEeEEEECCCC------CCCCCe-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCc
Q 011659 225 VQGITILAPVT------SPNTDG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS 296 (480)
Q Consensus 225 i~~~~i~~~~~------~~n~DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~ 296 (480)
|++|++....+ ...-|| +++. .+.+|+|++|.|...+-+.-+.+. +.+.. . ...+|++.+|.|.+...
T Consensus 131 IDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~s-d~~~~--~-~~~~vT~h~N~f~~~~~ 206 (330)
T 2qy1_A 131 VDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYS-DSDTK--N-SAARTTYHHNRFENVES 206 (330)
T ss_dssp EESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSS-TTCGG--G-GGCEEEEESCEEEEEEE
T ss_pred EEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCC-Ccccc--C-CCceEEEECcEEcCCCC
Confidence 99999975321 011154 4554 689999999999875554444432 11110 0 12589999998874321
Q ss_pred ceEEEcccccCceeEEEEEeeEEeCC-CceEEEEeecCCCCceecEEEEeeEecccceeEE
Q 011659 297 AVIALGSEMSGGIQDVRAEDITAIDS-ESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAFW 356 (480)
Q Consensus 297 ~gi~igs~~~~~v~nI~v~n~~~~~~-~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i~ 356 (480)
+.-++. .+ .+++.|+.+++. ..++.... + ..|.+|+..+++...|+.
T Consensus 207 R~Pr~r----~G--~~hv~NN~~~n~~~~~i~~~~--~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 207 RVPLQR----FG--LSHIYNNYFNNVTTSGINVRM--G-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp CTTEEE----SS--EEEEESCEEEEECSCSEEEET--T-----CEEEEESCEEEEEESSEE
T ss_pred CCCcee----cc--eEEEEeeEEEcccceEeccCC--C-----cEEEEEccEEECCCCcee
Confidence 111221 11 478899998875 35554321 1 246666666666555543
No 69
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=97.26 E-value=0.00018 Score=71.72 Aligned_cols=128 Identities=12% Similarity=0.019 Sum_probs=82.9
Q ss_pred EEEEeeecEEEEeEEEEeC--CCc--------eEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEE-ecEEeeC
Q 011659 192 IEIMYSQNIQISNLTLINS--PSW--------NVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIE-DCYIVSG 260 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns--~~~--------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~-n~~i~~g 260 (480)
+.+.+.+|+.|.|--..+. ..| ......+++|.+++++..... ....-+++..|+++++. +..+.
T Consensus 140 I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~--Sg~WTIhPi~Cqnvt~r~gL~f~-- 215 (514)
T 2vbk_A 140 TIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLM--QGLWHSKFIACQAGTCRVGLHFL-- 215 (514)
T ss_dssp CSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEE--ESEEEEEEESCEEEEEEEEEEEE--
T ss_pred ccccCceEEEEECCCeEeCCCCCccccceeeeccceEEeeeEEEEeEEEeEec--cCcEEEeEeccCceecccCcccc--
Confidence 4566677887776221111 011 133345789999999653110 11244788889999877 44442
Q ss_pred CceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccc-------cCceeEEEEEeeEEeCCCceEEEEee-c
Q 011659 261 DDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEM-------SGGIQDVRAEDITAIDSESGVRIKTA-V 332 (480)
Q Consensus 261 dD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~-------~~~v~nI~v~n~~~~~~~~Gi~i~s~-~ 332 (480)
.+ |+||.|+||+|..++ ++|+|+|.. ....|||. ..++-|.+. .
T Consensus 216 ------eS------------CrNV~IsnC~FsVGD-dciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~m 267 (514)
T 2vbk_A 216 ------GQ------------CVSVSVSSCHFSRGN-YSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSETM 267 (514)
T ss_dssp ------SC------------CEEEEEESCEEECTT-SCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSEE
T ss_pred ------CC------------CCeEEEeccEEecCc-ceeeeecCceecccccCCcchhcc---------cccEEECchhh
Confidence 12 999999999999998 899988752 22355554 356777765 3
Q ss_pred CCCCceec-EEEEeeEecccce
Q 011659 333 GRGGFVKD-VYVRRMTMKTMKW 353 (480)
Q Consensus 333 ~~~g~v~n-I~~~ni~~~~~~~ 353 (480)
.+.|+| |+++++.+.+..+
T Consensus 268 --~~Gvk~~v~v~~Clf~~td~ 287 (514)
T 2vbk_A 268 --CIGFKNAVYVHDCLDLHMEQ 287 (514)
T ss_dssp --EESCSEEEEESCCEEEEEES
T ss_pred --cccccccEEEEeeeccCCcc
Confidence 467888 9999988887643
No 70
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.05 E-value=0.11 Score=52.15 Aligned_cols=140 Identities=13% Similarity=0.077 Sum_probs=79.5
Q ss_pred EEEEeeecEEEEeEEEEeCCCc----------eEEEeccccEEEEeEEEECCCCCCCCCeEecC-----------CCccE
Q 011659 192 IEIMYSQNIQISNLTLINSPSW----------NVHPVYSSSVIVQGITILAPVTSPNTDGINPD-----------SCTNT 250 (480)
Q Consensus 192 i~~~~~~nv~I~~v~i~ns~~~----------~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~-----------~s~nV 250 (480)
......+++..+||+|+|.... .+. ...+...+.+|+|... .|-+... ....-
T Consensus 195 T~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~-v~gDr~~fy~C~f~G~-----QDTLy~~~~~~~~~~~~d~~gRq 268 (422)
T 3grh_A 195 VFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALR-TDGDQVQINNVNILGR-----QNTFFVTNSGVQNRLETNRQPRT 268 (422)
T ss_dssp SEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEE-ECCSSEEEEEEEEECS-----TTCEEECCCCTTCSCCSSCCCEE
T ss_pred EEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEE-ecCCcEEEEeeEEEee-----cceeeeccccccccccccccccE
Confidence 3445678999999999987432 222 3567888888888863 3434432 23456
Q ss_pred EEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC-----cceEEEcccccCceeEEEEEeeEEeCCC-c
Q 011659 251 RIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF-----SAVIALGSEMSGGIQDVRAEDITAIDSE-S 324 (480)
Q Consensus 251 ~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~-----~~gi~igs~~~~~v~nI~v~n~~~~~~~-~ 324 (480)
..++|.|...-|-|- + .-...+++|++..-. ..-|.-.+.....-..++|.||++.... .
T Consensus 269 yy~~CyIeGtVDFIF-G-------------~a~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~~ 334 (422)
T 3grh_A 269 LVTNSYIEGDVDIVS-G-------------RGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDG 334 (422)
T ss_dssp EEESCEEEESEEEEE-E-------------SSEEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEECSSS
T ss_pred EEEecEEeccccEEc-c-------------CceEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeCCCC
Confidence 778888876555332 1 235677777776321 1224444333334456788888887432 1
Q ss_pred eEEE-EeecCCCCceecEEEEeeEeccc
Q 011659 325 GVRI-KTAVGRGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 325 Gi~i-~s~~~~~g~v~nI~~~ni~~~~~ 351 (480)
...+ ..|....-..-.|+|.+..|.+.
T Consensus 335 ~~yLGRPW~~ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 335 VAQLGRSLDVDANTNGQVVIRDSAINEG 362 (422)
T ss_dssp CBEEEEEECCSTTBCCEEEEESCEECTT
T ss_pred CEEcCCCCCCcCCcCccEEEEeCcccCc
Confidence 2222 23432211233477777777764
No 71
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.65 E-value=0.0056 Score=60.66 Aligned_cols=123 Identities=12% Similarity=0.068 Sum_probs=79.8
Q ss_pred EEEE---EeeecEEEEeEEEEeCC---------------CceEEEec-cccEEEEeEEEECCCCC------------CCC
Q 011659 191 LIEI---MYSQNIQISNLTLINSP---------------SWNVHPVY-SSSVIVQGITILAPVTS------------PNT 239 (480)
Q Consensus 191 ~i~~---~~~~nv~I~~v~i~ns~---------------~~~i~~~~-~~nv~i~~~~i~~~~~~------------~n~ 239 (480)
.|.+ ..++||.|+|++|++.. ..+|.+.. ++||.|++|++....+. ...
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 3777 57999999999998631 45799999 99999999999964210 114
Q ss_pred Ce-EecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEee
Q 011659 240 DG-INPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDI 317 (480)
Q Consensus 240 DG-I~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~ 317 (480)
|| +++. .+.+|+|++|.|...+-+.-+.+. +.+. ......-+|++.+|.|.+...+.=++. .+ .+++-|+
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~s-d~~~-~~d~g~~~vT~hhN~f~~~~~R~Pr~R----~G--~~Hv~NN 255 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHS-DSNG-SQDKGKLHVTLFNNVFNRVTERAPRVR----YG--SIHSFNN 255 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCC-TTCH-HHHTTCCEEEEESCEEEEEEECSSEES----SC--EEEEESC
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCC-CCCc-ccccCcceEEEECeEEcCccccCcccc----cc--eEEEEcc
Confidence 55 5565 689999999999875544444332 1100 000112478999988874321222221 12 3789999
Q ss_pred EEeC
Q 011659 318 TAID 321 (480)
Q Consensus 318 ~~~~ 321 (480)
.+++
T Consensus 256 ~~~~ 259 (361)
T 1pe9_A 256 VFKG 259 (361)
T ss_dssp EEEE
T ss_pred eEec
Confidence 9864
No 72
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.07 E-value=0.043 Score=56.83 Aligned_cols=138 Identities=9% Similarity=0.007 Sum_probs=95.5
Q ss_pred eeecEEEEeEEEEeC-CCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCC-----ceeeecCC
Q 011659 196 YSQNIQISNLTLINS-PSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGD-----DCVAVKSG 269 (480)
Q Consensus 196 ~~~nv~I~~v~i~ns-~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gd-----D~iai~sg 269 (480)
...+.+|++-.+.+. ....+....+.+.+|++.++... ..||.+..+++.+|+++.|.... .||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 357888888777765 34566666777789999999863 45798888888889999987643 4565532
Q ss_pred CCccCcccCCCceeEEEEEEEEeCCCc------ceEEEcccc----cCceeEEEEEeeEEeCCCc-eEEEE---------
Q 011659 270 WDQYGIAYGMPTKQLIIRRLTCISPFS------AVIALGSEM----SGGIQDVRAEDITAIDSES-GVRIK--------- 329 (480)
Q Consensus 270 ~~~~g~~~~~~~~ni~I~n~~~~~~~~------~gi~igs~~----~~~v~nI~v~n~~~~~~~~-Gi~i~--------- 329 (480)
. +.+|+|++|.+..+ .||.+.... ...+++++|++++|.+... ||.+.
T Consensus 300 -----------~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~ 367 (506)
T 1dbg_A 300 -----------S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEY 367 (506)
T ss_dssp -----------B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHH
T ss_pred -----------C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccc
Confidence 3 34999999987642 277775321 2356899999999999987 99998
Q ss_pred -eecC-CCCceecEEEEeeEeccc
Q 011659 330 -TAVG-RGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 330 -s~~~-~~g~v~nI~~~ni~~~~~ 351 (480)
...+ ....=.|++|.|.-+.+.
T Consensus 368 ~~g~~~~~~~p~~~~~~nN~i~~~ 391 (506)
T 1dbg_A 368 CAANRLKFETPHQLMLKGNLFFKD 391 (506)
T ss_dssp HHHTTCCCBCCCSEEEESCEEECC
T ss_pred cccccccccCCCcEEEEccEEEcC
Confidence 1110 012336788888776664
No 73
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.71 E-value=0.3 Score=43.06 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=58.6
Q ss_pred cEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeeecCCCCccCcccCCCceeEEEEEEEEeCCCcceEE
Q 011659 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIA 300 (480)
Q Consensus 222 nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~~~gi~ 300 (480)
..+++|+.|-. +..||||.. -+-+|+|+.+.. +.|++.+++ ...++|.+.-.++...--|.
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~--G~ctl~NVwwedVcEDA~T~kg------------~g~~~I~GGgA~~A~DKV~Q 114 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCY--GDNVVENVVWEDVGEDALTVKS------------EGVVEVIGGSAKEAADKVFQ 114 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEEC--SSEEEEEEEESSCCSCSEEECS------------SEEEEEESCEEEEEEEEEEE
T ss_pred CCEEEEEEECC----CCcCcEEEc--CCEeEEEEEeeeeeceeeEEcC------------CCeEEEECCCccCCCceEEE
Confidence 55677776643 357888885 356788888765 788888875 33455555444432101122
Q ss_pred EcccccCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccceeE
Q 011659 301 LGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKWAF 355 (480)
Q Consensus 301 igs~~~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~~i 355 (480)
.. +--.+.|+|.+..+ .|--..+-.+ ...=++|.++|+++.+....+
T Consensus 115 ~N-----g~Gtv~I~nF~~~~--~GKl~RSCGn-c~~~r~v~i~~v~~~n~k~~l 161 (196)
T 3t9g_A 115 LN-----APCTFKVKNFTATN--IGKLVRQNGN-TTFKVVIYLEDVTLNNVKSCV 161 (196)
T ss_dssp EC-----SSEEEEEEEEEEEE--EEEEEEECTT-CCSCEEEEEEEEEEEEEEEEE
T ss_pred EC-----CCceEEEeeEEEcc--CCEEEEcCCC-CCceeEEEEeCeEEeCCEEEE
Confidence 21 11234555555532 3333443321 123367777777777765544
No 74
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=94.92 E-value=0.81 Score=40.33 Aligned_cols=132 Identities=12% Similarity=0.077 Sum_probs=92.2
Q ss_pred eecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcc
Q 011659 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276 (480)
Q Consensus 197 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~ 276 (480)
-++.+|+|+.|-.....+++.. -+.+|+|+.+.. -..|.+.+.++..++|.+.-.++.+|=|--..+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng------- 117 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNA------- 117 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECS-------
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECC-------
Confidence 4578999999977778899886 368899999986 457889988778899999998887776654443
Q ss_pred cCCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEecccce
Q 011659 277 YGMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTMKW 353 (480)
Q Consensus 277 ~~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~~~ 353 (480)
.-.+.|+|.+..+ .|--.-|-+ ...-+++.++|+++.+....+ +++.. .-..+++.|+++.++..
T Consensus 118 ----~Gtv~I~nF~~~~---~GKl~RSCGnc~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 118 ----PCTFKVKNFTATN---IGKLVRQNGNTTFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp ----SEEEEEEEEEEEE---EEEEEEECTTCCSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred ----CceEEEeeEEEcc---CCEEEEcCCCCCceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 4568888887763 232222211 123479999999998764332 33332 23567888888887655
No 75
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.34 E-value=0.51 Score=41.72 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=14.3
Q ss_pred CCCeEecCCCccEEEEecEEee-CCceeeec
Q 011659 238 NTDGINPDSCTNTRIEDCYIVS-GDDCVAVK 267 (480)
Q Consensus 238 n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~ 267 (480)
..||||..+ +-+|+|+.+.. +.|++.++
T Consensus 61 ~~dGIHC~G--~CtleNVwwedVcEDA~T~k 89 (197)
T 1ee6_A 61 AADGVHCYG--DCTITNVIWEDVGEDALTLK 89 (197)
T ss_dssp CTTCEEEES--CEEEEEEEESSCCSCSEEEE
T ss_pred CcccEEEcC--ceeEEEEEeeeccccccEEc
Confidence 345555542 34555555543 55555555
No 76
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=94.22 E-value=0.49 Score=45.93 Aligned_cols=111 Identities=13% Similarity=0.164 Sum_probs=74.3
Q ss_pred eccccEEEEeEEEECCCCC--CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 218 VYSSSVIVQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~--~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
...++++++|++|.+.... ..+-++.+ .+.++.++||.|....|.+....+ + ..++||++.+..
T Consensus 91 v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r-~~~~~c~I~G~v 156 (319)
T 1gq8_A 91 AVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHSN------------R-QFFINCFIAGTV 156 (319)
T ss_dssp ECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECSS------------E-EEEESCEEEESS
T ss_pred EECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecCc------------c-EEEEecEEEeee
Confidence 3588999999999986532 24556776 478899999999988888877652 3 488999998653
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc----eEEEEeecCC--CCceecEEEEeeEeccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES----GVRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
+ +-.|. -...|+||++..... .-.| +.+++ ...-..+.|.|+++...
T Consensus 157 -D-FIfG~------~~a~f~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 157 -D-FIFGN------AAVVLQDCDIHARRPGSGQKNMV-TAQGRTDPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp -S-CEEES------CEEEEESCEEEECCCSTTCCEEE-EEECCCSTTCCCEEEEESCEEEEC
T ss_pred -e-EEecC------CcEEEEeeEEEEecCCCCCceEE-EeCCCCCCCCCceEEEECCEEecC
Confidence 2 33342 247889999875321 1122 33322 23456788888888754
No 77
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=93.79 E-value=0.63 Score=45.10 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=74.2
Q ss_pred eccccEEEEeEEEECCCCC--CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEEEEeCCC
Q 011659 218 VYSSSVIVQGITILAPVTS--PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPF 295 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~~--~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~~~~~~~ 295 (480)
...++++++|++|.+.... ..+-++.+ .+.++.++||.|....|.+....+ ++ .++||++.+.-
T Consensus 87 v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~~------------r~-~~~~c~I~G~v 152 (317)
T 1xg2_A 87 AVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHSQ------------RQ-FYRDSYVTGTV 152 (317)
T ss_dssp ECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECSS------------EE-EEESCEEEESS
T ss_pred EECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecCc------------cE-EEEeeEEEece
Confidence 3688999999999987532 24556777 478899999999988888777653 33 88999998643
Q ss_pred cceEEEcccccCceeEEEEEeeEEeCCCc----eEEEEeecCC--CCceecEEEEeeEeccc
Q 011659 296 SAVIALGSEMSGGIQDVRAEDITAIDSES----GVRIKTAVGR--GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 296 ~~gi~igs~~~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~~--~g~v~nI~~~ni~~~~~ 351 (480)
-+-.|. -...|+||++..... .-.| +.+++ ...-..+.|.|+++...
T Consensus 153 --DFIfG~------~~avf~~c~i~~~~~~~~~~~~i-tA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 153 --DFIFGN------AAVVFQKCQLVARKPGKYQQNMV-TAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp --SCEEEC------CEEEEESCEEEECCCSTTCCEEE-EEECCCCTTSCCEEEEESCEEEEC
T ss_pred --eEEcCC------ceEEEeeeEEEEeccCCCCccEE-EecCcCCCCCCcEEEEECCEEecC
Confidence 233342 237889999875321 1122 23322 23456788888888754
No 78
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=93.14 E-value=1.2 Score=42.77 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=11.6
Q ss_pred ceEEeCccceEeCCChhh
Q 011659 158 DVVITGDNGTIDGQGELW 175 (480)
Q Consensus 158 nv~I~G~~G~idG~g~~~ 175 (480)
.-+|.| +++||.+..|
T Consensus 124 ~~~i~g--~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFEN--RTVDCGGVTI 139 (344)
T ss_dssp TEEEES--SEEECTTCEE
T ss_pred ceeEec--ceEcCCCcEE
Confidence 346777 6899988764
No 79
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=92.02 E-value=1 Score=39.82 Aligned_cols=79 Identities=13% Similarity=0.072 Sum_probs=57.0
Q ss_pred eecEEEEeEEEEeCCCceEEEeccccEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcc
Q 011659 197 SQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIA 276 (480)
Q Consensus 197 ~~nv~I~~v~i~ns~~~~i~~~~~~nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~ 276 (480)
-++.+|+|+.|-.....++|... +.+|+|+.+.. -..|.+.+.++..++|.+.-.+..+|=|--..+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng------- 113 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQINA------- 113 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEEECS-------
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEEecC-------
Confidence 45789999999888888999875 58999999986 356778887666778887777776665543333
Q ss_pred cCCCceeEEEEEEEEe
Q 011659 277 YGMPTKQLIIRRLTCI 292 (480)
Q Consensus 277 ~~~~~~ni~I~n~~~~ 292 (480)
.-.+.|+|.+..
T Consensus 114 ----~Gtv~I~nF~~~ 125 (197)
T 1ee6_A 114 ----AGTINIRNFRAD 125 (197)
T ss_dssp ----SEEEEEESCEEE
T ss_pred ----CceEEEeeEEEc
Confidence 345666665543
No 80
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=91.86 E-value=9.7 Score=37.44 Aligned_cols=67 Identities=13% Similarity=0.159 Sum_probs=43.6
Q ss_pred ceeEEEEEEEEeCCCcceEEEcccccC-----------------ceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMSG-----------------GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYV 343 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~~-----------------~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~ 343 (480)
+.|..++|.....+.-+|+.+|+.... -..|=.|+|+...++ .|+.+. +.|.+++|+||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~-lGVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDC-MGIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESC-SSCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheecc-ceeeee-ecCCCCeEeeEEe
Confidence 678999998888776689999884211 123445666666655 343332 3456788999987
Q ss_pred EeeEec
Q 011659 344 RRMTMK 349 (480)
Q Consensus 344 ~ni~~~ 349 (480)
+++.-.
T Consensus 340 ~dcag~ 345 (543)
T 3riq_A 340 YEAHKE 345 (543)
T ss_dssp ESCSSC
T ss_pred eccccC
Confidence 776544
No 81
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=88.00 E-value=4.7 Score=39.37 Aligned_cols=111 Identities=9% Similarity=0.034 Sum_probs=73.5
Q ss_pred eccccEEEEeEEEECCCC----------------CCCCCeE--ecCCCccEEEEecEEeeCCceeeecCCCCccCcccCC
Q 011659 218 VYSSSVIVQGITILAPVT----------------SPNTDGI--NPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGM 279 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~----------------~~n~DGI--~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~ 279 (480)
..+++++++|++|.+... ...+-++ .+ .+.++.++||.|....|.+-...
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v-~~d~~~f~~c~f~G~QDTLy~~~----------- 160 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK-SGDRAYFKDVSLVGYQATLYVSG----------- 160 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT-TCBSEEEEEEEEECSTTCEEECS-----------
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee-ccCcEEEEeeEEecccceEEECC-----------
Confidence 357899999999998751 1233456 33 57889999999999888877664
Q ss_pred CceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCCc---e-----EEEEeecCC-CCceecEEEEeeEecc
Q 011659 280 PTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES---G-----VRIKTAVGR-GGFVKDVYVRRMTMKT 350 (480)
Q Consensus 280 ~~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~---G-----i~i~s~~~~-~g~v~nI~~~ni~~~~ 350 (480)
....++||++.+.- -+-.|. -...|+||++.-... + -.| +.++. ...=..+.|.|+++..
T Consensus 161 --gr~~~~~c~I~G~v--DFIFG~------a~a~f~~c~i~~~~~~~~~~~~~~g~I-tA~~~~~~~~~G~vf~~c~i~~ 229 (342)
T 2nsp_A 161 --GRSFFSDCRISGTV--DFIFGD------GTALFNNCDLVSRYRADVKSGNVSGYL-TAPSTNINQKYGLVITNSRVIR 229 (342)
T ss_dssp --SEEEEESCEEEESE--EEEEES------SEEEEESCEEEECCCTTSCTTSCCEEE-EEECCBTTCSCCEEEESCEEEE
T ss_pred --CCEEEEcCEEEece--EEEeCC------ceEEEecCEEEEecCcccccccCceEE-EccCCCCCCCCEEEEEcCEEec
Confidence 35788999999543 344453 247899999964321 1 123 22221 1233458899999876
Q ss_pred c
Q 011659 351 M 351 (480)
Q Consensus 351 ~ 351 (480)
.
T Consensus 230 ~ 230 (342)
T 2nsp_A 230 E 230 (342)
T ss_dssp S
T ss_pred C
Confidence 4
No 82
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=87.56 E-value=6.6 Score=38.61 Aligned_cols=113 Identities=10% Similarity=0.034 Sum_probs=75.5
Q ss_pred eccccEEEEeEEEECCCC----------------CCCCCeEecC-CCccEEEEecEEeeCCceeeecCCCCccCcccCCC
Q 011659 218 VYSSSVIVQGITILAPVT----------------SPNTDGINPD-SCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMP 280 (480)
Q Consensus 218 ~~~~nv~i~~~~i~~~~~----------------~~n~DGI~~~-~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~ 280 (480)
...++++++|++|+|... ...+-++.+. .+.+..+.||.|....|.+-...
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~------------ 186 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT------------ 186 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT------------
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC------------
Confidence 457899999999998752 1234456665 47889999999999888887762
Q ss_pred ceeEEEEEEEEeCCCcceEEEcccccCceeEEEEEeeEEeCCC------ceEEEEeecCC-CCceecEEEEeeEeccc
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSE------SGVRIKTAVGR-GGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~------~Gi~i~s~~~~-~g~v~nI~~~ni~~~~~ 351 (480)
.....+++|++++.- -+-.|. -...|+||++.-.. .+-.| |.+++ ...-..+.|.|+++...
T Consensus 187 ~gr~yf~~c~I~Gtv--DFIFG~------a~a~f~~c~i~~~~~~~~~~~~g~I-TA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 187 GSRSYFSDCEISGHV--DFIFGS------GITVFDNCNIVARDRSDIEPPYGYI-TAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp TCEEEEESCEEEESE--EEEEES------SEEEEESCEEEECCCSSCSSCCEEE-EEECCCTTCSCCEEEESCEEEEC
T ss_pred CCCEEEEcCEEEcCC--CEECCc------ceEEEEeeEEEEeccCcccCCccEE-EeCCcCCCCCcEEEEEeeEEecC
Confidence 246789999999543 455552 25789999996431 11223 22221 22334589999999863
No 83
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=85.33 E-value=0.29 Score=48.31 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=20.4
Q ss_pred cCcCCCCcchhHHHHHHHHHHh
Q 011659 58 FGGVGDGTTSNTKAFKAAIDHL 79 (480)
Q Consensus 58 fGA~gDg~tddT~Aiq~Ai~~~ 79 (480)
=||+|||++|||+|+.+|+.++
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~ 25 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT 25 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS
T ss_pred CcccCCCccCcHHHHHHHhccC
Confidence 4899999999999999999975
No 84
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=74.14 E-value=28 Score=33.51 Aligned_cols=65 Identities=20% Similarity=0.291 Sum_probs=44.5
Q ss_pred ceeEEEEEEEEeCCCcceEEEccccc--------C-----------ceeEEEEEeeEEeCCCceEEEEeecCCCCceecE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMS--------G-----------GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI 341 (480)
+.|..+++.....+--+|+.+|+... + -..|=.|.|..+.++ -|+.+... |.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 57999999998887668999998520 0 133556777777666 34444332 347888888
Q ss_pred EEEeeE
Q 011659 342 YVRRMT 347 (480)
Q Consensus 342 ~~~ni~ 347 (480)
+++++.
T Consensus 347 tv~DCA 352 (559)
T 2vfm_A 347 TVEDCA 352 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 888764
No 85
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=71.95 E-value=28 Score=33.34 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=28.9
Q ss_pred cEEEEeEEEECCCCCCCCCeEecCCCccEEEEecEEee-CCceeeecC
Q 011659 222 SVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVS-GDDCVAVKS 268 (480)
Q Consensus 222 nv~i~~~~i~~~~~~~n~DGI~~~~s~nV~I~n~~i~~-gdD~iai~s 268 (480)
..+++|+.|-. ...||||... -+-+|+|+.+.. +.|++.++.
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~kg 201 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATNNG 201 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEECS
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhcccccceecC
Confidence 45667766532 4678888862 247888888865 888888874
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=70.93 E-value=27 Score=33.67 Aligned_cols=65 Identities=28% Similarity=0.421 Sum_probs=44.5
Q ss_pred ceeEEEEEEEEeCCCcceEEEccccc--------C-----------ceeEEEEEeeEEeCCCceEEEEeecCCCCceecE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMS--------G-----------GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI 341 (480)
+.|..+++.....+--+|+.+|+... + -..|=.|.|..+.++ -|+.+... |.+++|+||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-GSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 57899999998887668999998520 0 133556777777766 34444332 347888888
Q ss_pred EEEeeE
Q 011659 342 YVRRMT 347 (480)
Q Consensus 342 ~~~ni~ 347 (480)
+++++.
T Consensus 350 tv~DCA 355 (559)
T 2v5i_A 350 TVQDCA 355 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 888764
No 87
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=68.64 E-value=38 Score=33.78 Aligned_cols=125 Identities=9% Similarity=0.017 Sum_probs=73.6
Q ss_pred EEeccccEEEEeEEEECCCCC------CCCCeEecCCCccEEEEecEEeeCCceeeecCCCCccCcccCCCceeEEEEEE
Q 011659 216 HPVYSSSVIVQGITILAPVTS------PNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRL 289 (480)
Q Consensus 216 ~~~~~~nv~i~~~~i~~~~~~------~n~DGI~~~~s~nV~I~n~~i~~gdD~iai~sg~~~~g~~~~~~~~ni~I~n~ 289 (480)
.....+++.++|++|.|.... ..+-.+.+ .+....+.+|.|....|-+.....-.+.+. ...-...-.+++|
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~-~~d~~gRqyy~~C 273 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQNTFFVTNSGVQNRL-ETNRQPRTLVTNS 273 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTTCEEECCCCTTCSC-CSSCCCEEEEESC
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecceeeeccccccccc-cccccccEEEEec
Confidence 344578999999999987521 12334444 467899999999998887765421000000 0001456789999
Q ss_pred EEeCCCcceEEEcccccCceeEEEEEeeEEeCCCc----eEEEEeecCCCCceecEEEEeeEecc
Q 011659 290 TCISPFSAVIALGSEMSGGIQDVRAEDITAIDSES----GVRIKTAVGRGGFVKDVYVRRMTMKT 350 (480)
Q Consensus 290 ~~~~~~~~gi~igs~~~~~v~nI~v~n~~~~~~~~----Gi~i~s~~~~~g~v~nI~~~ni~~~~ 350 (480)
++.+.- -+-.|. -...|++|++.-... +-.|.-.......-..+.|.|+++..
T Consensus 274 yIeGtV--DFIFG~------a~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 274 YIEGDV--DIVSGR------GAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp EEEESE--EEEEES------SEEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred EEeccc--cEEccC------ceEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEe
Confidence 999543 344552 256889998874321 11222111112334568899998884
No 88
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=66.38 E-value=50 Score=31.85 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=36.4
Q ss_pred ceeEEEEEEEEeCCCcceEEEcccc-cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEeccc
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~ 351 (480)
..|-.|.|..+.+.- |+.+|... .+.++||++++|- ..|..+-+.. -+|.||++-++
T Consensus 316 P~NHliDnllv~gsL--GVG~GMDG~G~YVSNitv~DCA----GsG~~~~t~~--------~~FtNi~vID~ 373 (559)
T 2vfm_A 316 PLNHLIDNLLVRGAL--GVGFGMDGKGMYVSNITVEDCA----GSGAYLLTHE--------SVFTNIAIIDT 373 (559)
T ss_dssp CCCCEEEEEEEECCS--SEEEEEEEESCEEEEEEEESCS----SEEEEEEEES--------CEEEEEEEESC
T ss_pred cchhhhhhheeeccc--ceeeeecCCCceEeeeEehhcc----CcceEEeecc--------ceeeeeEEEec
Confidence 357789999998764 56665543 3467888888762 3566666653 35666665543
No 89
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=65.91 E-value=50 Score=31.87 Aligned_cols=91 Identities=14% Similarity=0.123 Sum_probs=51.0
Q ss_pred CccEEEEecEEee-CCceeeecCCCC--cc-C-----ccc----CCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEE
Q 011659 247 CTNTRIEDCYIVS-GDDCVAVKSGWD--QY-G-----IAY----GMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDV 312 (480)
Q Consensus 247 s~nV~I~n~~i~~-gdD~iai~sg~~--~~-g-----~~~----~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI 312 (480)
+-|+.++++.... =.|++.+.+..+ +. + .-. .+-..|-.|.|..+.+.- |+.+|... .+.++||
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL--GVG~GMDG~G~YVSNi 349 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSL--GVGLGMDGSGGYVSNV 349 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCS--SEEEEEEEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc--ceeeeecCCCceEeee
Confidence 4466666666443 455666655311 10 0 001 122357789999998764 56665543 3467888
Q ss_pred EEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEeccc
Q 011659 313 RAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 313 ~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~ 351 (480)
++++|- ..|..+-+.. -+|.||++-++
T Consensus 350 tv~DCA----GsG~~~~t~~--------~~FtNi~vID~ 376 (559)
T 2v5i_A 350 TVQDCA----GAGMLAHTYN--------RVFSNITVIDC 376 (559)
T ss_dssp EEESCS----SEEEEEEEES--------CEEEEEEEESC
T ss_pred Eehhcc----CcceEEeecc--------ceeeeeEEEec
Confidence 888762 3566666653 35666665543
No 90
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=59.78 E-value=1.1e+02 Score=30.13 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=44.4
Q ss_pred CCccEEEEecEE-eeCCceeeecCCCCccCcc----------cCCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEEE
Q 011659 246 SCTNTRIEDCYI-VSGDDCVAVKSGWDQYGIA----------YGMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVR 313 (480)
Q Consensus 246 ~s~nV~I~n~~i-~~gdD~iai~sg~~~~g~~----------~~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~ 313 (480)
.|-|+.++++.. ..-.|++.+.+..+..-.+ ...-..|-.|+|...++.. |+.++..+ .+.++||+
T Consensus 261 RnYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~l--GVG~~~DG~~~~v~ni~ 338 (543)
T 3riq_A 261 RNYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCM--GIGAWWDGQKNIIDNVV 338 (543)
T ss_dssp CCBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCS--SCSSEECSSSCEEEEEE
T ss_pred ceeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc--eeeeeecCCCCeEeeEE
Confidence 466666666653 3445566665532210000 1112346678888888654 44444433 23466666
Q ss_pred EEeeEEeCCCceEEEEeecCCCCceecEEEE
Q 011659 314 AEDITAIDSESGVRIKTAVGRGGFVKDVYVR 344 (480)
Q Consensus 314 v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ 344 (480)
+++|. ..|+.+++. +-.++||++-
T Consensus 339 ~~dca----g~G~~~~~~---~~~ftNitvI 362 (543)
T 3riq_A 339 TYEAH----KEGMFDRGT---NNDITNITVV 362 (543)
T ss_dssp EESCS----SCSEEECSS---SCEEEEEEEE
T ss_pred eeccc----cCcceeecc---CcceeeEEEE
Confidence 66552 255555543 2334444443
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=59.42 E-value=38 Score=34.03 Aligned_cols=65 Identities=20% Similarity=0.291 Sum_probs=44.4
Q ss_pred ceeEEEEEEEEeCCCcceEEEccccc--------C-----------ceeEEEEEeeEEeCCCceEEEEeecCCCCceecE
Q 011659 281 TKQLIIRRLTCISPFSAVIALGSEMS--------G-----------GIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDV 341 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~gi~igs~~~--------~-----------~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI 341 (480)
+.|..+++.....+--+|+.+|+... + -..|=.|.|..+.++ -|+.+... |.+++|+||
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g~g~yvsni 453 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-GKGMYVSNI 453 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-EESCEEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-CCCceEeee
Confidence 57899999988877668999998520 0 133556777777766 34444332 347889988
Q ss_pred EEEeeE
Q 011659 342 YVRRMT 347 (480)
Q Consensus 342 ~~~ni~ 347 (480)
+++++.
T Consensus 454 tv~dca 459 (666)
T 2xc1_A 454 TVEDCA 459 (666)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 888764
No 92
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=58.66 E-value=74 Score=31.98 Aligned_cols=114 Identities=14% Similarity=0.109 Sum_probs=62.7
Q ss_pred cccEEEEeEEEECCCCCCCCCeEec---------CCCccEEEEecEEee-CCceeeecCCCC--cc-C-----cc----c
Q 011659 220 SSSVIVQGITILAPVTSPNTDGINP---------DSCTNTRIEDCYIVS-GDDCVAVKSGWD--QY-G-----IA----Y 277 (480)
Q Consensus 220 ~~nv~i~~~~i~~~~~~~n~DGI~~---------~~s~nV~I~n~~i~~-gdD~iai~sg~~--~~-g-----~~----~ 277 (480)
+++--+-+++-..+.. .|+.- ..+-|+.++++.... =.|++.+.+..+ +. + .- .
T Consensus 344 ~~~ggvig~ts~rage----sg~ktwqgtvg~~tsrnynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~ 419 (666)
T 2xc1_A 344 ERDGGVIGFTSYRAGE----SGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPL 419 (666)
T ss_dssp TTCCEEESCEEECCSS----CSEEECCSEETTEECCCBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCT
T ss_pred ccCCCEEEEEecccCC----ccceeeecccccccccccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCch
Confidence 4566666666654431 22221 234567777776543 456666665411 10 0 00 1
Q ss_pred CCCceeEEEEEEEEeCCCcceEEEcccc-cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEeccc
Q 011659 278 GMPTKQLIIRRLTCISPFSAVIALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMKTM 351 (480)
Q Consensus 278 ~~~~~ni~I~n~~~~~~~~~gi~igs~~-~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~~~ 351 (480)
.+-..|-.|.|..+.+.- |+.+|..+ ++.++||++++|- ..|..+-+.. -+|.||++-++
T Consensus 420 h~lp~nhlidn~~v~~sl--gvg~gmdg~g~yvsnitv~dca----g~g~~~~~~~--------~~ftni~vid~ 480 (666)
T 2xc1_A 420 HQLPLNHLIDNLLVRGAL--GVGFGMDGKGMYVSNITVEDCA----GSGAYLLTHE--------SVFTNIAIIDT 480 (666)
T ss_dssp TCCCCCCEEEEEEEESCS--SEEEEEEEESCEEEEEEEESCS----SEEEEEEEES--------CEEEEEEEESC
T ss_pred hhCcchhhhhhheeeccc--ceeeeecCCCceEeeeEehhcc----CcceEEeecc--------ceeeeeEEEec
Confidence 122357789999998764 56665543 3468888888772 3566666653 35666655543
No 93
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=52.81 E-value=61 Score=30.65 Aligned_cols=131 Identities=15% Similarity=0.198 Sum_probs=63.4
Q ss_pred ceeEEEEEEEEeCCCcce-EEEcccc----------cCceeEEEEEeeEEeCCCceEEEEeecCCCCceecEEEEeeEec
Q 011659 281 TKQLIIRRLTCISPFSAV-IALGSEM----------SGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDVYVRRMTMK 349 (480)
Q Consensus 281 ~~ni~I~n~~~~~~~~~g-i~igs~~----------~~~v~nI~v~n~~~~~~~~Gi~i~s~~~~~g~v~nI~~~ni~~~ 349 (480)
++-|....|-+++.. .| |+--+.. .+-..+++|+.+.-.++..|-.+.-..| ++|+++|+++.
T Consensus 103 ss~i~~~~c~l~g~g-~g~~~~~~~~gn~lvfn~p~~g~ls~~ti~~nk~~ds~qg~qvs~~gg-----~dvsv~~i~fs 176 (542)
T 2x3h_A 103 SSGINSNYCNLDGRG-SGVLSHRSSTGNYLVFNNPRTGRLSNITVESNKATDTTQGQQVSLAGG-----SDVTVSDVNFS 176 (542)
T ss_dssp ECCEEESCCEEECTT-TEEEEECSSSSCCEEEESCEEEEEEEEEEECCCSSTTCBCCSEEEESC-----EEEEEEEEEEE
T ss_pred ccccccccccccccC-CceeeeecCCCCEEEEeCCCCcceeeEEEecccCCccccceEEEecCC-----CcceEeeeeee
Confidence 456777778887654 33 3332221 1235556666555555544443332221 45666666666
Q ss_pred ccc-eeEEEEeecCCCCCCCCCCCCCCeEEeEEEEEeEEecc-----ceeE--EEeccCCCCeeeEEEEe------EEEE
Q 011659 350 TMK-WAFWITGSYGSHPDNNYDPHALPVIQNINYRDMVAENV-----TMAA--RLEGIAGDPFTGICISN------VTIE 415 (480)
Q Consensus 350 ~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nIt~~nI~~~~~-----~~~~--~i~g~~~~~i~~i~~~n------i~~~ 415 (480)
+++ .++.+- .|+... .|+ ..-+++|++... +.+. .+..+...-|.+|.-+| |.+.
T Consensus 177 n~~g~gfsli-ayp~~~----~p~------g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk 245 (542)
T 2x3h_A 177 NVKGTGFSLI-AYPNDA----PPD------GLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELK 245 (542)
T ss_dssp EECSBEEEEE-EECSSS----CCB------SCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEE
T ss_pred ecCCCceeEE-EcCCCC----CCC------ceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEee
Confidence 553 334332 233211 133 334556666543 2232 34445556677777666 3333
Q ss_pred ecCCCCccceeEeeeec
Q 011659 416 LTNKPKKLQWNCTDITG 432 (480)
Q Consensus 416 ~~~~~~~~~~~c~~~~~ 432 (480)
.+ ...-+.+|+-+
T Consensus 246 ~~----a~ynivsnvig 258 (542)
T 2x3h_A 246 GT----ASYNIVSNVIG 258 (542)
T ss_dssp TT----CBSCEEEEEEE
T ss_pred cc----eeeehhhhhhh
Confidence 32 33445666665
No 94
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=25.77 E-value=1.2e+02 Score=29.65 Aligned_cols=40 Identities=15% Similarity=0.008 Sum_probs=19.7
Q ss_pred eeEEEEEEEEeCCCc----ceEEEcccccCce--eEEEEEeeEEeCC
Q 011659 282 KQLIIRRLTCISPFS----AVIALGSEMSGGI--QDVRAEDITAIDS 322 (480)
Q Consensus 282 ~ni~I~n~~~~~~~~----~gi~igs~~~~~v--~nI~v~n~~~~~~ 322 (480)
.+.+|+||.....-. .+-.+|... +.. .+.+|+||...+.
T Consensus 197 ~~g~I~nC~~~g~V~g~~~~g~~vGGIv-G~~~~~~gtI~ncY~tG~ 242 (363)
T 3n6z_A 197 QESYIKNCYSNATVSDRAASGGKAGGIA-GRKVGVGGFIENCYAYGA 242 (363)
T ss_dssp BCCEEEEEEECCEEEECCSSSEEEESSE-EEECSSSCEEEEEEECSC
T ss_pred CceEEEeEEEEEEEEeecccCcccceEe-eccccCCceEEEEEEEEE
Confidence 356888888763210 011222211 111 2457888887664
Done!