BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011661
(480 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RJP2|RHIE_DICD3 Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE
PE=1 SV=1
Length = 578
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 181/465 (38%), Gaps = 67/465 (14%)
Query: 22 STGRGQPLAYPEAVQLVNPTDPEHQ---GEVDDKYQYSCENKDLKVHGWICRTTPVGFWL 78
S RG PL Y E QL D + G V KY ++ ++ + W G W+
Sbjct: 172 SIRRGTPLLYDELEQLPKVQDETWRLPDGSVYSKYDFAGYQRESRY--WGVMGNGYGAWM 229
Query: 79 IIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYL 138
+ S E+ SG LKQ L H L H+ M G ++K++GP +Y+
Sbjct: 230 VPASGEYYSGDALKQELLVHQDAIILNYLTGSHFGTPDMVAQPG----FEKLYGPWLLYI 285
Query: 139 NSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASEDFQKSEERGCVSGRLLVQDSNDVIS 198
N D + L D + E SWPY + +D + +R VSGRL + + +
Sbjct: 286 NQGNDRE----LVADVSRRAEHERASWPYRW--LDDARYPRQRATVSGRLRTEAPHATVV 339
Query: 199 ANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR 258
N + ++ + Y F + DG FS+ N+ G Y L A+ G
Sbjct: 340 LNSS---------AENFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGL 390
Query: 259 SDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHP 318
G ++G + P P W IG DR A EF F + P
Sbjct: 391 LAQQTVRVEGKKTRLGQIDARQP--APLAWAIGQADRRADEFR------------FGDKP 436
Query: 319 DRFRQYGLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLD 378
++R W TE+ DL + IG S KDW++AQ Q +W I F
Sbjct: 437 RQYR----WQ--TEV--PADLTFEIGKSRERKDWYYAQT---------QPGSWHILFNTR 479
Query: 379 HVDRNSSYKLRVAIASATLAELQVRVNDP----NANRPLFTTGLIGRDNAIARHGIH-GL 433
++ Y L +AIA+A+ + + P N L TT D +I R + G
Sbjct: 480 TPEQ--PYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLLTTLKYDNDKSIYRGAMQSGR 537
Query: 434 YLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQGIMYDYIRLEGPP 478
Y H+ +P +G N I L+ +MYD I L P
Sbjct: 538 YHEAHIPLPAGALQQGGNRITLELLGGM-----VMYDAITLTETP 577
>sp|Q5AZ85|RGLB_EMENI Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglB
PE=2 SV=2
Length = 660
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 205/523 (39%), Gaps = 98/523 (18%)
Query: 13 RQMPLPEDLSTGRGQPLAYPEAVQLVN--PTDPEHQ--GEVDDKYQYSCENKDLKVHGW- 67
+ PLP D + + + +A +N P D +Q E KY +S +D VHG
Sbjct: 174 QTAPLPSDEAIA--EQIVVQDATWRLNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLY 231
Query: 68 ----ICRTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQ 123
T G WL++ + + GGPL +LT + G + H G+
Sbjct: 232 ADGSTSDGTTYGAWLVMNTKDTYYGGPLHSDLT-----------VDGIIYNYIVSNHHGE 280
Query: 124 DEP-----WKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASE----- 173
P + + FGP F N G L D + S SW +F S
Sbjct: 281 GTPNITNGFDRTFGPQFYLFNGG--GSSSLEELRDEARSLASP--SWNADFYDSIAKHVI 336
Query: 174 DFQKSEERGCVSGRLLVQDSND----VISANGAYV--GLAPPGDVGSWQTECKDYQFWTT 227
+ S +RG V G + + + V++ +G Y A P +Q+W
Sbjct: 337 GYVPSSQRGSVKGTIKLPKNAKSPIAVLTVDGHYFQDNSAVP----------SSHQYWAD 386
Query: 228 ADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGS-NIKMGDLVYEPPRDGPT 286
D++G FSI + G Y L + G GD+ D +V S +IK ++P G
Sbjct: 387 IDKNGRFSIDRVVAGKYRLTVYADGIFGDFTRDGIVVKARKSTSIKE---TWKPESAGTE 443
Query: 287 LWEIGIPDRSAREF-NVPDPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTI 343
+W +G PD+S+ EF + DP + HP + Y W Y +P + Y I
Sbjct: 444 IWRLGTPDKSSGEFRHGAARDPTH-----PRHPPEYLIY--WGAYDWQSDFPG-GIDYMI 495
Query: 344 GVSDYSKDW---FFAQVVREMDNKTYQGTT---WQIKFKLD----HVDRNSSYKLRVAIA 393
G SD + D+ +A DN + T W+I+F L H + ++ +++A A
Sbjct: 496 GESDPATDFNTVHWAVFGPTPDNPVAESNTTHDWRIRFDLSAKQLHARKTATLTIQLAGA 555
Query: 394 SATLAELQV-RVNDPNANRPLFT---------TGLIGRDNA---IARHGIHGLYLLYHVN 440
A V ++P AN PL + T +IG D + I R + +
Sbjct: 556 KAASGNTDVYNASEPYANLPLRSYINEQEEPLTMVIGYDQSSSCIVRSAVSCYQVREKWE 615
Query: 441 IPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
P + EG N + L P + ++ + YD +RLE
Sbjct: 616 FPASWLKEGSNLLRLSLPTNGTNYESAVLPTSVYVQYDALRLE 658
>sp|B8N5T6|RGLB_ASPFN Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglB PE=3 SV=1
Length = 663
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 185/471 (39%), Gaps = 72/471 (15%)
Query: 52 KYQYSCENKDLKVHGWIC-----RTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAV 106
KY +S +D VHG T G WL++ + + GGPL +LT V
Sbjct: 216 KYTFSNLWRDNSVHGLYADGTNSNGTTYGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 273
Query: 107 FLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQ-SW 165
+S H+ G D + FGP + N L ED + + + W
Sbjct: 274 LVSNHHGEGTPNITNGFD----RTFGPQYYLFNGGKGSKSSL---EDLRSEAETLADPGW 326
Query: 166 PYNFPASE-----DFQKSEERGCVSGRLLVQDSND----VISANGAYVGLAPPGDVGSWQ 216
+F S + S +RG V G++ + + +++ +G Y
Sbjct: 327 NADFYDSIAKHVIGYAPSSKRGSVQGQVKLPKGSTRPIAILTVDGQYFQ--------DNS 378
Query: 217 TECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDL 276
E +Q+W +DG F + +++ G Y L + G GD+ D V + +G K+ +
Sbjct: 379 VEASSHQYWAEMGQDGTFQLDHVKEGKYRLTVFADGIFGDFVHDG-VEVQAGKVTKVQE- 436
Query: 277 VYEPPRDGPTLWEIGIPDRSAREFNVPD-PDPKYVNRLFVNHPDRFRQYGLWSRYTELYP 335
+E G +W +G PD+S+ EF D PDP + ++ P F +G + + + +P
Sbjct: 437 TWEQESAGVEVWRLGTPDKSSGEFLHGDAPDPTHP----LHPPQHFIYWGAYD-WQQDFP 491
Query: 336 NEDLVYTIGVSDYSKD-----WFFAQVVREMDNKTYQGT-TWQIKFKLD--HVDRNSSYK 387
N + YTIG SD + D W + Y T W I F LD + + +
Sbjct: 492 N-GVNYTIGSSDPAVDFNTVHWSVYGPTPANPDVEYDTTHDWTINFSLDKKQLQQRKTAT 550
Query: 388 LRVAIASATLAELQVRV---NDPNANRPLFT---------TGLIG---RDNAIARHGIHG 432
L + +A A A V +P AN L + T L+G + I R +
Sbjct: 551 LTIQLAGAKTAAGNTDVYNATEPYANLALESYINEQKEPLTLLVGFNQSSSCIVRSAVSC 610
Query: 433 LYLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
+ + P G N + L PR + ++ + YD +RLE
Sbjct: 611 YQVRSRMEFPADWLNVGNNVLTLHLPRNATDYETAVLPGTVYVQYDALRLE 661
>sp|Q0C7K7|RGLB_ASPTN Probable rhamnogalacturonate lyase B OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglB PE=3 SV=1
Length = 660
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 198/530 (37%), Gaps = 100/530 (18%)
Query: 7 IADNRHRQMPLPEDLSTGRGQPLAYPEAVQLVN-PTDPEHQ--GEVDDKYQYSCENKDLK 63
+ + + PLP D + G+ Q + + N P D + E KY +S +D
Sbjct: 168 LTSSELQTAPLPSDEAVGK-QVVVQDATWRFNNTPNDAYYTQFSEYFTKYTFSNAWRDNN 226
Query: 64 VHGW-----ICRTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYME 118
VHG T G WL++ + + GGPL +LT + G +
Sbjct: 227 VHGLYADGSTSNGTTFGAWLVMNTKDTYYGGPLHSDLT-----------VDGIVYNYIVS 275
Query: 119 THIGQDEP-----WKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQS-----WPYN 168
H G+ P + + FGP F N + ++ SE +S W
Sbjct: 276 NHHGEGTPNITNGFDRTFGPQFYLFNGGG---------SSSLNELRSEAESLADPSWNVE 326
Query: 169 FPAS-----EDFQKSEERGCVSGRLLVQDSND----VISANGAYVGLAPPGDVGSWQTEC 219
F S + S +RG V G++ + +++ +G Y +
Sbjct: 327 FYDSIAKHVVGYVPSSKRGSVQGQIKLPRGATRPIAILTVDGQYFQ--------DNSVDP 378
Query: 220 KDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYE 279
+ YQ+W D +G F + ++ G Y L + G GDY D V + ++ D ++
Sbjct: 379 RSYQYWVEMDANGKFQLDHVVEGKYRLTVYADGIFGDYVRDG-VQVRGRKTTRIND-SWQ 436
Query: 280 PPRDGPTLWEIGIPDRSAREF-NVPDPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPN 336
P G +W +G PD+S+ EF + DP + HP + Y W Y + +PN
Sbjct: 437 PESAGVEVWRLGTPDKSSGEFLHGVARDPTH-----PLHPPEYLIY--WGAYDWQQDFPN 489
Query: 337 EDLVYTIGVSDYSKDW------FFAQVVREMDNKTYQGTTWQIKFKL--DHVDRNSSYKL 388
+ YTIG SD + D+ F D + W I F L + + + L
Sbjct: 490 -GVNYTIGSSDPATDFNTVHWSVFGPTPDNPDVEYDTTHDWAINFSLTKKQLQKRKTATL 548
Query: 389 RVAIASATLAELQVRV---NDPNANRPLFT---------TGLIG---RDNAIARHGIHGL 433
+ +A A A V ++P N L + T LIG + I R +
Sbjct: 549 TIQLAGAKTASGNTDVYKPDEPYTNLALESYINQQEEPLTMLIGFNQSSSCIVRSAVSCY 608
Query: 434 YLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
+ + P G NT+ L PR + + + YD +RLE
Sbjct: 609 QVRSRMTFPADWLQVGSNTLTLHLPRNATDVEDAILPGTVYVQYDALRLE 658
>sp|Q4WR79|RGLB_ASPFU Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglB PE=3 SV=1
Length = 658
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 173/477 (36%), Gaps = 89/477 (18%)
Query: 52 KYQYSCENKDLKVHGWICRTT-----PVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAV 106
KY +S + +D VHG T G WL++ + GPL +LT V
Sbjct: 216 KYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLVM-----NTKGPLHSDLT--VDGIVYNY 268
Query: 107 FLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWP 166
+S H+ G D + FGP F N L K+ SW
Sbjct: 269 IVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGKGSTSSLQDLRSEAAKLADP--SWN 322
Query: 167 YNFPAS-----EDFQKSEERGCVSGRLLVQDSND----VISANGAYV---GLAPPGDVGS 214
F S + S +RG V GR+ + +++ +G Y + P
Sbjct: 323 AEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKGASNPIAILTVDGQYFQDNSVVP------ 376
Query: 215 WQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMG 274
YQ+WT D G F I + G Y L + G GD+ D VT+ +G +
Sbjct: 377 -----SSYQYWTDIDTSGRFRIDRVVEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVK 430
Query: 275 DLVYEPPRDGPTLWEIGIPDRSAREFN---VPDPDPKYVNRLFVNHPDRFRQYGLWSRY- 330
+ ++ G +W +G PD+S+ EF DP HP + Y W Y
Sbjct: 431 E-KWDAESAGKEIWRLGTPDKSSGEFRHGVARDPTHPL-------HPPEYLIY--WGAYD 480
Query: 331 -TELYPNEDLVYTIGVSDYSKD-----WFFAQVVREMDNKTYQGT-TWQIKFKLDHVDRN 383
+P + + YTIG SD + D W + N Y T W+I F L
Sbjct: 481 WQSDFP-KGIDYTIGSSDPATDFNTVHWSVFGPTPDNPNVEYNTTHDWKINFSLTKKQLR 539
Query: 384 SSYK--LRVAIASATLAEL---QVRVNDPNAN-----------RPL-FTTGLIGRDNAIA 426
+S K L + +A A A + + ++P N PL F G + I
Sbjct: 540 NSKKATLTIQLAGAKTASGNTDEYKASEPYINLIHESYINDQKEPLSFVIGFNQSSSCIV 599
Query: 427 RHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
R + + + P GENT+ L P + + + YD +RLE
Sbjct: 600 RSAVSCYQVRSRMEFPADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656
>sp|B0XPA2|RGLB_ASPFC Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglB PE=3
SV=1
Length = 658
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 173/477 (36%), Gaps = 89/477 (18%)
Query: 52 KYQYSCENKDLKVHGWICRTT-----PVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAV 106
KY +S + +D VHG T G WL++ + GPL +LT V
Sbjct: 216 KYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLVM-----NTKGPLHSDLT--VDGIVYNY 268
Query: 107 FLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWP 166
+S H+ G D + FGP F N L K+ SW
Sbjct: 269 IVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGKGSTSSLQDLRSEAAKLADP--SWN 322
Query: 167 YNFPAS-----EDFQKSEERGCVSGRLLVQDSND----VISANGAYV---GLAPPGDVGS 214
F S + S +RG V GR+ + +++ +G Y + P
Sbjct: 323 AEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKGASNPIAILTVDGQYFQDNSVVP------ 376
Query: 215 WQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMG 274
YQ+WT D G F I + G Y L + G GD+ D VT+ +G +
Sbjct: 377 -----SSYQYWTDIDTSGRFRIDRVVEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVK 430
Query: 275 DLVYEPPRDGPTLWEIGIPDRSAREFN---VPDPDPKYVNRLFVNHPDRFRQYGLWSRY- 330
+ ++ G +W +G PD+S+ EF DP HP + Y W Y
Sbjct: 431 E-KWDAESAGKEIWRLGTPDKSSGEFRHGVARDPTHPL-------HPPEYLIY--WGAYD 480
Query: 331 -TELYPNEDLVYTIGVSDYSKD-----WFFAQVVREMDNKTYQGT-TWQIKFKLDHVDRN 383
+P + + YTIG SD + D W + N Y T W+I F L
Sbjct: 481 WQSDFP-KGIDYTIGSSDPATDFNTVHWSVFGPTPDNPNVEYNTTHDWKINFSLTKKQLR 539
Query: 384 SSYK--LRVAIASATLAEL---QVRVNDPNAN-----------RPL-FTTGLIGRDNAIA 426
+S K L + +A A A + + ++P N PL F G + I
Sbjct: 540 NSKKATLTIQLAGAKTASGNTDEYKASEPYINLIHESYINDQKEPLSFVIGFNQSSSCIV 599
Query: 427 RHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
R + + + P GENT+ L P + + + YD +RLE
Sbjct: 600 RSAVSCYQVRSRMEFPADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656
>sp|A5ABH4|RGLB_ASPNC Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglB PE=3 SV=1
Length = 706
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 166/452 (36%), Gaps = 76/452 (16%)
Query: 52 KYQYSCENKDLKVHGW-----ICRTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAV 106
KY +S +D VHG + G WL++ + + GGPL +LT V
Sbjct: 216 KYTFSNAWRDNSVHGMYADGSTSNGSTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 273
Query: 107 FLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEV---Q 163
+S H+ G D + FGP + + N L ++K +E
Sbjct: 274 LVSNHHGEGTPNITYGFD----RTFGPQYYHFNGGKGSTASL-----QELKSDAETLADP 324
Query: 164 SWPYNFPAS-----EDFQKSEERGCVSGRLLVQDSND----VISANGAYVGLAPPGDVGS 214
SW +F S + S +RG V G++ + V++ +G Y
Sbjct: 325 SWNVDFYDSIAKHVVGYTPSSQRGSVQGKIKLPKGATRPIAVLTVDGQYFQ--------D 376
Query: 215 WQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMG 274
YQ+W D+ G FS+ +++ G Y L + G GD+ D V + +G +
Sbjct: 377 NSVNSSSYQYWAEIDDSGHFSVDHVKEGPYRLTVYADGIFGDFVRDG-VQVKAGKKTTIQ 435
Query: 275 DLVYEPPRDGPTLWEIGIPDRSAREFN---VPDPDPKYVNRLFVNHPDRFRQYGLWSRY- 330
+ +E G +W +G PD+S+ EF DP HP + Y W Y
Sbjct: 436 E-TWEAESAGTEIWRLGTPDKSSGEFRHGVARDPTHPL-------HPPEYLIY--WGAYD 485
Query: 331 -TELYPNEDLVYTIGVSDYSKD-----WFFAQVVREMDNKTYQGT-TWQIKFKL--DHVD 381
+P + + YTIG SD + D W Y T W I F L D +
Sbjct: 486 WQSDFP-DGINYTIGTSDPATDLNTVHWSVFGPTPNDPRVEYDTTHDWTINFPLSEDDLA 544
Query: 382 RNSSYKLRVAIASATLAELQVRV---NDPNANRPLFT---------TGLIG---RDNAIA 426
S L + +A A A V ++P N L + T LIG + I
Sbjct: 545 ERSKATLTIQLAGAKAASGNTDVYNASEPYTNLALESYINDQAEPLTLLIGFNQSSSCIV 604
Query: 427 RHGIHGLYLLYHVNIPGTRFIEGENTIFLKQP 458
R + + + P G N + L P
Sbjct: 605 RSAVSCYQVRSRMEFPADWLKVGNNVLTLHLP 636
>sp|A1D144|RGLB_NEOFI Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglB PE=3 SV=1
Length = 658
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 168/473 (35%), Gaps = 81/473 (17%)
Query: 52 KYQYSCENKDLKVHGWICRTT-----PVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAV 106
KY +S + +D VHG T G WL++ + GPL +LT V
Sbjct: 216 KYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWLVM-----NTKGPLHSDLT--VDGIVYNY 268
Query: 107 FLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWP 166
+S H+ G D + FGP F N L K+ SW
Sbjct: 269 IVSNHHGEGTPNITNGFD----RTFGPQFYLFNGGKGSTSSLQDLRSEAAKLADP--SWN 322
Query: 167 YNFPAS-----EDFQKSEERGCVSGRLLVQDSND----VISANGAYV---GLAPPGDVGS 214
F S + S +RG V GR+ + +++ +G Y + P
Sbjct: 323 AEFYDSIAKHVVGYVPSSKRGSVDGRVKLPKGATNPIAILTVDGQYFQDNSVVP------ 376
Query: 215 WQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMG 274
YQ+WT D G F I + G Y L + G GD+ D VT+ +G +
Sbjct: 377 -----SSYQYWTDIDTSGKFRIDRVVEGKYRLTVYADGIFGDFVRDG-VTVKAGKTTTVK 430
Query: 275 DLVYEPPRDGPTLWEIGIPDRSAREF-NVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTEL 333
+ ++ G +W +G PD+S+ EF + DP + ++ P+ +G + ++L
Sbjct: 431 E-KWDAESAGKEVWRLGTPDKSSGEFRHGVARDPTHP----LHPPEYLIYWGAYDWQSDL 485
Query: 334 YPNEDLVYTIGVSDYSKDW------FFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYK 387
D Y IG SD + D+ F D + W+I F L +S K
Sbjct: 486 PKGID--YRIGSSDPATDFNTVHWSVFGPTPDNPDVEYNTTHDWKINFSLTKKQLRNSKK 543
Query: 388 LRVAIASATLAELQVRVNDPNANRPL-----------------FTTGLIGRDNAIARHGI 430
+ I A + NA+ P F G + I R +
Sbjct: 544 ATLTIQLAGAKTASGNTDVYNASEPYINLSHESYINDQKEPLSFVIGFNQSSSCIVRSAV 603
Query: 431 HGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSPFQG--------IMYDYIRLE 475
+ + P GENT+ L P + + + YD +RLE
Sbjct: 604 SCYQVRSRMEFPADWLKVGENTLTLHLPYNATDTETAILPATVYVQYDALRLE 656
>sp|Q5B5P1|RGLC_EMENI Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rglC PE=3 SV=1
Length = 1041
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 131/349 (37%), Gaps = 49/349 (14%)
Query: 52 KYQYSCENKDLKVHGWICRTTP------VGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLA 105
KY + +D VHG + G WL+ + E GGPL +L V
Sbjct: 213 KYTLTESWRDHDVHGHFSNGSTSGDGNTYGAWLVHNTRETYYGGPLHADLV--VDGIVYN 270
Query: 106 VFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSW 165
+SGHY G D + FGP + + NS G L DA E +
Sbjct: 271 YIVSGHYGAPNPNLTHGFD----RTFGPQYYHFNSGGPGTTLEELRADAAQYASPEWNAE 326
Query: 166 PYNFPASE--DFQKSEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKD-Y 222
Y+ A ++ S R G++ N A + L+ KD
Sbjct: 327 FYDSIAKHIPNYVPSTGRTTFRGKV-----NLPKGAKKPIIVLSENEQDFQLNVFKKDSL 381
Query: 223 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPR 282
Q+W D G F+I + G Y + + G + D + I S ++ ++
Sbjct: 382 QYWAEIDGSGAFTIPRVVKGTYRVTIYADEIFGWFIKDNVKVIGSNAHT----FTWKEET 437
Query: 283 DGPTLWEIGIPDRSAREF---NVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPN--- 336
G +W IG+PD+S+ EF PD P+++R Y W +Y YP+
Sbjct: 438 AGKEIWRIGVPDKSSGEFLHGYAPDTSKPL-------QPEQYRIY--WGKYD--YPSDFP 486
Query: 337 EDLVYTIGVSDYSKD-----W-FFAQVVREMDNKTY--QGTTWQIKFKL 377
E + Y +G SD +KD W FF + N+ Y W I F L
Sbjct: 487 EGVNYHVGKSDPAKDLNYIHWSFFPSQGNHLRNEPYYQNVNNWTITFDL 535
>sp|Q2U5P7|RGLC_ASPOR Probable rhamnogalacturonate lyase C OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglC PE=3 SV=1
Length = 695
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 129/346 (37%), Gaps = 49/346 (14%)
Query: 75 GFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPV 134
G WL+ + E GGPL +L V +SGH+ G D W GP
Sbjct: 244 GAWLVHNTVETYYGGPLHSDLV--VDGIVYNYLVSGHHGAPTPNLTHGFDRTW----GPQ 297
Query: 135 FIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASE--DFQKSEERGCVSGRLLVQD 192
F Y N L DA E + Y+ A +F S R G++ +
Sbjct: 298 FYYFNRGDSETTLADLRADAAKYADPEWNAEFYDSIADHIPNFTPSTGRTTFKGKVSLPK 357
Query: 193 SND----VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYA 248
V+S +G L + TE Q+W D+ G FSI + G Y +
Sbjct: 358 GAKRPIIVLSEDGQDFQL------NVFNTES--LQYWAEIDKSGSFSIPRVVEGTYRITI 409
Query: 249 WVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF---NVPDP 305
+ G + D + + S S K ++ G +W IGIPD+S+ E+ PD
Sbjct: 410 YADEIFGWFIQDHVKVLKSQS--KDYSFTWKEESAGKEIWRIGIPDKSSGEYLHGYAPDT 467
Query: 306 DPKYVNRLFVNHPDRFRQYGLWSRYTELYPN---EDLVYTIGVSDYSKD-----W-FFAQ 356
P++ R Y W +Y YP E + + +G SD S+D W FF
Sbjct: 468 SKPL-------QPEQHRIY--WGKYD--YPADFPEGINFHVGKSDPSQDLNYIHWAFFPS 516
Query: 357 VVREMDNKTY--QGTTWQIKFKL--DHVDRNSSYKLRVAIASATLA 398
+ + Y W + F L D + ++ V IA A A
Sbjct: 517 QGNHLRTEPYYDNVNNWTVTFDLTADQLHNTNTATFTVQIAGAKTA 562
>sp|Q2U0Q1|RGLA_ASPOR Probable rhamnogalacturonate lyase A OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglA PE=3 SV=1
Length = 528
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 279
D Q+WT DG F+ ++ G+Y + + G+Y+ ++ V++T GS+ +
Sbjct: 301 DAQYWTYTSSDGSFTSPAMKPGDYTMVY----YQGEYKVAETSVSVTVGSSTSKD--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
G T+++IG D + F N ++ R + SR + P L
Sbjct: 355 SVETGDTIFKIGDWDGTPTGFR--------------NAENQLRMHPSDSRMSSWGP---L 397
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S+ + D+ A D T IKF ++ LR+ S
Sbjct: 398 TYTVGSSELT-DFPMAAFKGVNDPVT-------IKFTATSAQTGAA-TLRIGTTLSFAGG 448
Query: 399 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +ND + P T L R + R GL +Y VNIP +EGENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNLNSR--GVTRGAYRGLGEVYDVNIPSGTIVEGENTITIS 504
>sp|B8NCU7|RGLA_ASPFN Probable rhamnogalacturonate lyase A OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglA PE=3 SV=1
Length = 528
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 36/238 (15%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 279
D Q+WT DG F+ ++ G+Y + + G+Y+ ++ V++T+GS+ +
Sbjct: 301 DAQYWTYTSSDGSFTSPAMKPGDYTMVY----YQGEYKVAETSVSVTAGSSTSKD--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
G T+++IG D + F N ++ R + SR + P L
Sbjct: 355 FVETGDTIFKIGDWDGTPTGFR--------------NAENQLRMHPSDSRMSSWGP---L 397
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S+ + D+ A D T IKF ++ LR+ S
Sbjct: 398 TYTVGSSELT-DFPMAAFKGVNDPVT-------IKFTATSAQTGAA-TLRIGTTLSFAGG 448
Query: 399 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +ND + P T L R + R GL +Y VNIP +EGENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNLNSR--GVTRGAYRGLGEVYDVNIPSGTIVEGENTITIS 504
>sp|A2R2L1|RGLA_ASPNC Probable rhamnogalacturonate lyase A OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglA PE=3 SV=2
Length = 531
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEP 280
D Q+WT G F+ ++ G Y + + +V + + VT+++GS+ +
Sbjct: 301 DAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYV---VATSEVTVSAGSSTSKD--ISGS 355
Query: 281 PRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLV 340
G T+++IG D F N ++ R + SR ++ P L
Sbjct: 356 VETGTTIFKIGDWDGQPTGFR--------------NAENQLRMHPSDSRMSDWGP---LT 398
Query: 341 YTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAE 399
YT+G S + F + + +++ IKF D+ + LR+ S
Sbjct: 399 YTVGSSSLTD--FPMAIFKSVNSPV------TIKFTATS-DQTGAATLRIGTTLSFAGGR 449
Query: 400 LQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +ND + P T L R + R G +Y V++P +EGENTI +
Sbjct: 450 PQATINDYEGSAPSAPTNLDSR--GVTRGAYRGYGDVYDVSVPEGTIVEGENTITIS 504
>sp|Q5AX45|RGLA_EMENI Rhamnogalacturonate lyase A OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglA
PE=2 SV=1
Length = 527
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 35/238 (14%)
Query: 220 KDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYE 279
D Q+WT DG F+ ++ G Y + + F ++ VT+++GS+ +
Sbjct: 300 NDAQYWTYTASDGSFTSPAMKPGTYTMKYYQGEFP---VAETTVTVSAGSSTTKN--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
+ G T+++IG D F D + HP R WS
Sbjct: 355 SVKTGTTIFKIGEWDGQPTGFRNADKQLRM-------HPSDSRM-DSWSS---------- 396
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S S F V + ++N IKF ++ LR+ S
Sbjct: 397 TYTVGSSSLSD--FPMAVFKSVNNPV------TIKFTATSAQTGAA-TLRIGTTLSFAGG 447
Query: 399 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +N P T L R + R GL +Y V++P + GENTI +
Sbjct: 448 RPQATINSYTGPAPSAPTNLNSR--GVTRGAYRGLGEVYDVSVPAGTIVTGENTITIS 503
>sp|Q8NJK5|RGLA_ASPNG Rhamnogalacturonate lyase A (Fragment) OS=Aspergillus niger GN=rglA
PE=3 SV=1
Length = 499
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEP 280
D Q+WT G F+ ++ G Y + + +V + + VT+++GS+ +
Sbjct: 300 DAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYV---VATSEVTVSAGSSTSKD--ISGS 354
Query: 281 PRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLV 340
G T+++IG D F N ++ R + SR ++ P L
Sbjct: 355 VETGTTIFKIGDWDGQPTGFR--------------NAENQLRMHPSDSRMSDWGP---LT 397
Query: 341 YTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRV-AIASATLAE 399
YT+G S + F + + +++ IKF D+ + LR+ S
Sbjct: 398 YTVGSSSLTD--FPMAIFKSVNSPV------TIKFTATS-DQTGAATLRIRTTLSFAGGR 448
Query: 400 LQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 452
Q +ND + P T L R + R G +Y V++P +EGENT
Sbjct: 449 PQATINDYEGSAPSAPTNLDSR--GVTRGAYRGYGDVYDVSVPEGTIVEGENT 499
>sp|Q00019|RGLA_ASPAC Rhamnogalacturonate lyase A OS=Aspergillus aculeatus GN=rglA PE=1
SV=1
Length = 527
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 223 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 281
Q+WT G F+ ++ G Y + + G+Y + + VT+++GS +
Sbjct: 302 QYWTYTSSSGSFTSPAMKPGTYTMVY----YQGEYAVATSSVTVSAGSTTTKN--ISGSV 355
Query: 282 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 341
+ G T+++IG D F N ++ R + SR + P L Y
Sbjct: 356 KTGTTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---LTY 398
Query: 342 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 400
T+G S + F V + ++N IKF ++ LR+ S
Sbjct: 399 TVGSSALTD--FPMAVFKSVNNPV------TIKFTATSAQTGAA-TLRIGTTLSFAGGRP 449
Query: 401 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +N + P T L R + R GL +Y V+IP + G NTI +
Sbjct: 450 QATINSYTGSAPAAPTNLDSR--GVTRGAYRGLGEVYDVSIPSGTIVAGTNTITIN 503
>sp|Q0CVU1|RGLA_ASPTN Probable rhamnogalacturonate lyase A OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglA PE=3 SV=2
Length = 531
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 223 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 281
Q+WT DG F+ ++ G Y + A+ + G+YR ++ VT+++GS+ +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTM-AY---YQGEYRVAETSVTVSAGSSTTKN--ISGSV 356
Query: 282 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 341
+ G T+++IG D D + F+N + R + SR + P + Y
Sbjct: 357 KTGTTIFKIG------------DWDGQPTG--FLNADKQLRMHPSDSRMSSWGP---VTY 399
Query: 342 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 400
T+G S S F + + +++ IKF ++ LR+ S
Sbjct: 400 TVGSS--SVGSFPMALFKSVNSPV------TIKFTATSAQTGAA-TLRIGTTLSFAGGRP 450
Query: 401 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q +N P T L R + R GL +Y V+IP + G NTI +
Sbjct: 451 QATINSYTGPTPSAPTNLNSR--GVTRGAYRGLGEVYDVSIPAGTIVAGTNTITIN 504
>sp|A3PEU8|CCS1_PROM0 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9301) GN=ccsB PE=3 SV=1
Length = 428
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 30/103 (29%)
Query: 267 SGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKY--VNRLFVNHPDRFRQY 324
S +NIK+ D E DG IP + + + D K+ V VNHP RF+
Sbjct: 207 SKANIKLVDFSIERESDG-------IPKQFISKLDFTSEDSKFNEVKTAKVNHPIRFK-- 257
Query: 325 GLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 367
G++ Y DW + +V E+DN YQ
Sbjct: 258 -------------------GLTIYQADWAISNIVLEIDNILYQ 281
>sp|A1C995|RGLA_ASPCL Probable rhamnogalacturonate lyase A OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=rglA PE=3 SV=1
Length = 528
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 89/236 (37%), Gaps = 36/236 (15%)
Query: 223 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 281
Q+WT DG F+ ++ G Y + + G+Y+ ++ VT+ +GS I +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVAETSVTVRAGSKITKN--ISGSV 356
Query: 282 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 341
+ G T+++IG D F D + HP R W L Y
Sbjct: 357 KTGKTIFKIGEWDGQPTGFRNADKQLRM-------HPSDSRM-AAWG---------PLTY 399
Query: 342 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 400
T+G S S F V + ++N IKF ++ LR+ S
Sbjct: 400 TVGRSAPSD--FPMAVFKSVNNPV------TIKFTASAAQTAAA-TLRIGTTLSFAGGRP 450
Query: 401 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 456
Q ++N A P L R + R GL +Y V IP + G NTI +
Sbjct: 451 QAKINSYTAAAPPAPKNLDSR--GVTRGAYRGLGEVYDVAIPAGTIVAGVNTITIS 504
>sp|Q4W9T6|RGLA_ASPFU Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglA PE=3 SV=1
Length = 528
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 279
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
G T+++IG D F N ++ R + SR + P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---L 397
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S S F + + +++ IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD--FPMAIFKSVNSPV------TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 399 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 453
QV VN P+A + L + G + R GL +Y V IP + G NTI
Sbjct: 449 RPQVTVNSWTGPIPSAPKDLNSRG-------VTRGAYRGLGEVYDVAIPAGTIVAGTNTI 501
Query: 454 FLK 456
+
Sbjct: 502 TIS 504
>sp|B0YEH9|RGLA_ASPFC Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglA PE=3
SV=1
Length = 528
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 279
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
G T+++IG D F N ++ R + SR + P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---L 397
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S S F + + +++ IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD--FPMAIFKSVNSPV------TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 399 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 453
QV VN P+A + L + G + R GL +Y V IP + G NTI
Sbjct: 449 RPQVTVNSWTGPIPSAPKDLNSRG-------VTRGAYRGLGEVYDVAIPAGTIVAGTNTI 501
Query: 454 FLK 456
+
Sbjct: 502 TIS 504
>sp|Q318T2|CCS1_PROM9 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9312) GN=ccsB PE=3 SV=1
Length = 428
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 30/103 (29%)
Query: 267 SGSNIKMGDLVYEPPRDGPTLWEIGIPDR--SAREFNVPDPDPKYVNRLFVNHPDRFRQY 324
S +NIK+ + E DG IP + S F+ D + + VNHP RF+
Sbjct: 207 SKANIKLVNFSIERESDG-------IPKQFISKLNFSSEDLNINEIKTAKVNHPIRFK-- 257
Query: 325 GLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 367
G++ Y DW + VV E+DN YQ
Sbjct: 258 -------------------GLTIYQADWAISNVVLEIDNILYQ 281
>sp|A2BT34|CCS1_PROMS Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain AS9601) GN=ccsB PE=3 SV=1
Length = 428
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 26/101 (25%)
Query: 267 SGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGL 326
S +N+K+ D E DG I + S+ N+ + + VNHP RF+
Sbjct: 207 SRANVKLVDFSIERESDGVPKQFISKLNFSSENLNLNE-----IKTTKVNHPIRFK---- 257
Query: 327 WSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 367
G++ Y DW + +V E+DN YQ
Sbjct: 258 -----------------GLTIYQADWAISNIVLEIDNILYQ 281
>sp|A1D9P9|RGLA_NEOFI Probable rhamnogalacturonate lyase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglA PE=3 SV=1
Length = 528
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 90/243 (37%), Gaps = 46/243 (18%)
Query: 221 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 279
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 280 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 339
G T+++IG D F N ++ R + SR P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMASWGP---L 397
Query: 340 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 398
YT+G S S F + + N IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD---FPMAIFKSTNSPV-----TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 399 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 453
Q +VN P+A + L + G + R G +Y V IP + G NTI
Sbjct: 449 RPQAKVNSFTGPVPSAPKDLNSRG-------VTRGAYRGFGEVYDVAIPAGTIVAGTNTI 501
Query: 454 FLK 456
+
Sbjct: 502 TIS 504
>sp|Q9P6J6|BGLS_SCHPO Putative beta-glucosidase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC1683.04 PE=3 SV=1
Length = 832
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 333 LYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHV-DRNS------- 384
L P+ED VY G+S + F V +DNKT Q T F+ + +RNS
Sbjct: 452 LIPDEDAVYEFGISVFGTALLFIDDVLLIDNKTKQTPTNH-TFEFGTIEERNSIYLKKGR 510
Query: 385 SYKLRVAIASATLAELQVRVNDPNANR 411
Y +RV SA L ++ R
Sbjct: 511 KYNVRVEYGSAATYTLSTNLSPSTGGR 537
>sp|P29119|FURI1_XENLA Furin-1 OS=Xenopus laevis GN=furin PE=2 SV=1
Length = 783
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 401 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 452
Q R N NR T G A+A +GI G+ + Y+ NI G R ++GE T
Sbjct: 181 QPRYTQLNDNR--HGTRCAGEVAAVANNGICGVGIAYNANIGGVRMLDGEVT 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,326,278
Number of Sequences: 539616
Number of extensions: 9663718
Number of successful extensions: 15960
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 15919
Number of HSP's gapped (non-prelim): 32
length of query: 480
length of database: 191,569,459
effective HSP length: 121
effective length of query: 359
effective length of database: 126,275,923
effective search space: 45333056357
effective search space used: 45333056357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)