BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011664
(480 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 123/236 (52%), Gaps = 19/236 (8%)
Query: 178 WRSVPFTHPST---FDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
W+ PF HP + ++ +E+++K + D+ FL+ +Y G ++R YLLYGP G
Sbjct: 195 WK--PFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPG 252
Query: 235 TGKSSFAAAMASFMSYDVYDVDLSRVA-DDADLKSLLLQTTSKSVILIEDLDRFLVEKP- 292
+GK+SF A+A + YD+ ++L+ D L LL K+V+L+ED+D +
Sbjct: 253 SGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER 312
Query: 293 -------AAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFP 345
A V+ SG+LN +DGV +S +ER++ T N + +D AL+RPGR+DV +
Sbjct: 313 SGEVGFHANVTFSGLLNALDGVTSS---DERIIFMTTNHPEKLDPALVRPGRVDVKAYLG 369
Query: 346 LCDFSSFKTLASSYLGLKDHKLFPQVEEIFQNGSSLSPAEIGELMIANRNSPSRAL 401
+ + + + G + + +S+ A + L + N++SP+ A+
Sbjct: 370 NATPEQVREMFTRFYGHSPEMADDLSDIVCPKNTSM--ASLQGLFVMNKSSPADAV 423
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 25/243 (10%)
Query: 178 WRSVPFTHPST---FDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
WR F P ++ +++ +K + D+ F+K +Y G ++R YLLYGP G
Sbjct: 213 WRK--FGQPKAKRMLPSVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPG 270
Query: 235 TGKSSFAAAMASFMSYDVYDVDLSR--VADDADLKSLLLQTTSKSVILIEDLDRFLVEKP 292
+GK+SF A+A + Y++ ++LS + DD L L+ +S++L+ED+D ++
Sbjct: 271 SGKTSFIQALAGELDYNICILNLSENNLTDDR-LNHLMNNMPERSILLLEDIDAAFNKRS 329
Query: 293 --------AAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHF 344
++V+ SG+LN +DGV +S EE + T N + +D A++RPGRID +
Sbjct: 330 QTGEQGFHSSVTFSGLLNALDGVTSS---EETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
Query: 345 P-LCDFSSFKTLASSYLGLKD--HKLFPQVEEIFQNGSSLSPAEIGELMIANRNSPSRAL 401
+ K Y G D K V+E+ ++S A++ L + N+++P AL
Sbjct: 387 GNATPYQVEKMFMKFYPGETDICKKFVNSVKEL---DITVSTAQLQGLFVMNKDAPHDAL 443
Query: 402 KSV 404
K V
Sbjct: 444 KMV 446
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 24/251 (9%)
Query: 172 DGCCGRWRSVPFTHPSTFDTIS---METDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYL 228
+G G W F +P + ++S + DLK+++ D++SF+ + +Y G ++R YL
Sbjct: 168 NGGNGNWER--FGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYL 225
Query: 229 LYGPSGTGKSSFAAAMASFMSYDVYDVDL-SRVADDADLKSLLLQTTSKSVILIEDLDRF 287
LYG G GKSS A+A ++ D+ V L S+ DD + LL KS++LIED+D
Sbjct: 226 LYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAA 285
Query: 288 L-------------VEKPAAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLR 334
+++ SG+LN +DGV E R++ T N + +D AL+R
Sbjct: 286 FKSHRDNVDSNNNNSNNNNSLTYSGLLNALDGV---ASQEGRILFMTTNKIELLDSALIR 342
Query: 335 PGRIDVHIHFPLCDFSSFKTLASSYLGL-KDHKLFPQVEEIFQNGSSLSPAEIGELMIAN 393
GRID+ I S L + + L D++L + E + LS ++I ++
Sbjct: 343 EGRIDLKIKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHD-HQLSMSQIQGFLLKY 401
Query: 394 RNSPSRALKSV 404
NSP +A++ V
Sbjct: 402 INSPEKAIEEV 412
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 22/241 (9%)
Query: 178 WRSVPFTHPS---TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
WR PF +P +++ ++ L +R+ D++ F+ +Y G ++R YLLYGP G
Sbjct: 176 WR--PFGYPRRRRPLNSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPG 233
Query: 235 TGKSSFAAAMASFMSYDV-YDVDLSRVADDADLKSLLLQTTSKSVILIEDLD-RFL---- 288
GKSSF A+A + + + D L LL +S++L+ED+D FL
Sbjct: 234 CGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDL 293
Query: 289 -VEKPAA------VSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVH 341
VE P ++ SG+LN +DGV ++ E R++ T N D +D AL+RPGR+D+
Sbjct: 294 AVENPVKYQGLGRLTFSGLLNALDGVAST---EARIVFMTTNHVDRLDPALIRPGRVDLK 350
Query: 342 IHFPLCDFSSFKTLASSYLGLKDHKLFPQ-VEEIFQNGSSLSPAEIGELMIANRNSPSRA 400
+ C + + + L E + + + +SPA++ + +N P A
Sbjct: 351 EYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGA 410
Query: 401 L 401
+
Sbjct: 411 I 411
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 178 WRSVPFTHPS---TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
WR+ F +P D++ ++ L +R+ D+ F+ +Y G ++R YLLYGP G
Sbjct: 176 WRT--FGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPG 233
Query: 235 TGKSSFAAAMASFMSYDV-YDVDLSRVADDADLKSLLLQTTSKSVILIEDLD-RFL---- 288
GKSSF A+A + + + D L LL +S++L+ED+D FL
Sbjct: 234 CGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDL 293
Query: 289 -VEKP------AAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVH 341
VE P ++ SG+LN +DGV ++ E R++ T N D +D AL+RPGR+D+
Sbjct: 294 AVENPIKYQGLGRLTFSGLLNALDGVAST---EARIVFMTTNYIDRLDPALIRPGRVDLK 350
Query: 342 IHFPLCDFSSFKTLASSYLGLKDHKLFPQ-VEEIFQNGSSLSPAEIGELMIANRNSPSRA 400
+ C + + + L E + + S +SPA++ + +N P A
Sbjct: 351 EYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSEISPAQVQGYFMLYKNDPMGA 410
Query: 401 LKSV 404
+ ++
Sbjct: 411 VHNI 414
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 34/237 (14%)
Query: 191 TISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSY 250
++ +E+ + R+ D++ F+ +Y G ++R YLLYGP G GKSSF A+A + Y
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 251 DVYDVDLS-RVADDADLKSLLLQTTSKSVILIEDLDRFLV-------EKPAA------VS 296
+ + LS R D L LL +S+IL+ED+D V E P A ++
Sbjct: 250 SICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMGRLT 309
Query: 297 LSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLA 356
SG+LN +DGV +S E R++ T N + +D AL+RPGR+D+ + C +
Sbjct: 310 FSGLLNALDGVASS---EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMF 366
Query: 357 SSYLGLKDHKLFPQ---------VEEIFQNGSSLSPAEIGELMIANRNSPSRALKSV 404
+ +PQ E+ + LS A++ + + P+ A+K++
Sbjct: 367 --------RRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYKTDPAGAIKNI 415
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 178 WRSVPFTHPS---TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
WR PF +P +++ +E + R+ D+ F+ +Y G ++R YLLYGP G
Sbjct: 176 WR--PFGYPRRRRPLNSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPG 233
Query: 235 TGKSSFAAAMASFMSYDV-YDVDLSRVADDADLKSLLLQTTSKSVILIEDLD-RFLVEKP 292
GKSSF A+A + + + D L LL +S++L+ED+D FL
Sbjct: 234 CGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDL 293
Query: 293 AA-----------VSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVH 341
AA ++ SG+LN +DGV ++ E R++ T N D +D AL+RPGR+D+
Sbjct: 294 AAENPIKYQGLGRLTFSGLLNALDGVAST---EARIVFMTTNHIDRLDPALIRPGRVDMK 350
Query: 342 IHFPLCDFSSFKTLASSYLGLKDHKLFPQ-VEEIFQNGSSLSPAEIGELMIANRNSPSRA 400
+ C + + + L + + Q + +SPA++ + +N P+ A
Sbjct: 351 EYVGHCSRWQLTQMFQRFYPGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGA 410
Query: 401 LKSV 404
+++
Sbjct: 411 IQNA 414
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 172 DGCCGRWRSVPFTHPS-TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLY 230
+ WR F ++ +E + ++ D++ F++ +Y G ++R YLLY
Sbjct: 170 NAVGAEWRQFGFPRRRRPLSSVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLY 229
Query: 231 GPSGTGKSSFAAAMASFMSYDV-YDVDLSRVADDADLKSLLLQTTSKSVILIEDLDRFLV 289
GP G GKSSF A+A + Y + D L LL +S+IL+ED+D V
Sbjct: 230 GPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFV 289
Query: 290 ------EKPAA------VSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGR 337
+ P A ++ SG+LN +DGV ++ E R++ T N D +D AL+RPGR
Sbjct: 290 SRDLNKQNPTAYQGMGRLTFSGLLNALDGVAST---EARIVFMTTNHIDRLDPALIRPGR 346
Query: 338 IDVHIHFPLC 347
+DV + C
Sbjct: 347 VDVKQYVGHC 356
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 46/266 (17%)
Query: 178 WRSVPFTHPS---TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSG 234
WR F HP ++ ++ + D++ FL +Y+ G ++R YLLYGP G
Sbjct: 194 WRR--FGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPG 251
Query: 235 TGKSSFAAAMASFMSYDVYDVDLS-RVADDADLKSLLLQTTSKSVILIEDLDRFL----- 288
TGKSSF A+A + + ++L+ + D L LL +S+IL+ED+D +
Sbjct: 252 TGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNH 311
Query: 289 --------VEKP----------------------AAVSLSGVLNFMDGVLNSCCFEERVM 318
P +A++ SG+LN +DGV S E R++
Sbjct: 312 DLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNALDGVAAS---EGRIL 368
Query: 319 VFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYLGLKDHKLFPQVEEIFQNG 378
T N + +D+ L+RPGR+D+ I LC + + + D L Q E +N
Sbjct: 369 FMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQMFLKFYP-TDFDLAKQFVEKLEN- 426
Query: 379 SSLSPAEIGELMIANRNSPSRALKSV 404
SPA++ + N+ A+ ++
Sbjct: 427 YKFSPAQLQAYFMTYSNNSIEAINNL 452
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 187 STFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS 246
+TFD ++ +T+ K V+ +L +L+ +HR+G + R LL GP GTGK+ A A+A
Sbjct: 173 TTFDEVAGQTNAKREVQ-ELVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAG 231
Query: 247 FMSYDVYDVDLSRVAD------DADLKSL--LLQTTSKSVILIEDLDRFLVEKPAAV--- 295
+ Y + S + + ++ L + + S S+I I++LD + A
Sbjct: 232 EAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRGAGYGGG 291
Query: 296 ------SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+L+ +L MDG + +++ N D +D AL+RPGR D H+ L D
Sbjct: 292 HDEREQTLNQILAEMDGF---AGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTLDLPD 347
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 21/147 (14%)
Query: 257 LSRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVSLSGVLNFMDGVLNSCCFEER 316
+ +V DD ++T ++ IL + L + VEK + ++LSG+LN +DG+ NS E R
Sbjct: 64 VEKVTDD--------KSTLENKILADQLKK--VEKVSKLTLSGILNSLDGIFNS---EGR 110
Query: 317 VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYLGLK-DHKLFPQV-EEI 374
+++ T N + +D AL+R GRID+ I F CD + ++ G D + ++ +I
Sbjct: 111 IVIMTTNHSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYGKNADSDILSKIPSDI 170
Query: 375 FQNGSSLSPAEIGELMIANRNSPSRAL 401
+ SPA + L+++ RN+P +L
Sbjct: 171 Y------SPAHVSGLLLSYRNNPENSL 191
>sp|C7M0M0|FTSH_ACIFD ATP-dependent zinc metalloprotease FtsH OS=Acidimicrobium
ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882
/ ICP) GN=ftsH PE=3 SV=1
Length = 660
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 42/246 (17%)
Query: 174 CCGRWRSVPFT--HP-STFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLY 230
GR R+ +T P +TFD ++ +K VK ++ FL+ + +LG + LL
Sbjct: 154 SVGRSRAKTYTTERPKTTFDDVAGYQGVKGEVK-EVVDFLRDPSRFSQLGARIPKGILLV 212
Query: 231 GPSGTGKSSFAAAMAS-----FMSYDVYD-------VDLSRVADDADLKSLLLQTT---S 275
GP GTGK+ A A+A FMS D V +RV D L QT S
Sbjct: 213 GPPGTGKTLLARAVAGEAGVPFMSVSGSDFMEMFVGVGAARVRD-------LFQTARRQS 265
Query: 276 KSVILIEDLDRFLVEKPAAV---------SLSGVLNFMDGVLNSCCFEERVMVFTMNSKD 326
S+I I+++D ++ + +L+ +L+ MDG + E V++ N D
Sbjct: 266 PSIIFIDEIDSIGRKRGTGLGGGHDEREQTLNQMLSEMDGFDPA---EGIVVMAATNRPD 322
Query: 327 HVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYLGLKDHKLFPQVE-EIFQNGS-SLSPA 384
+D ALLRPGR D I PL D + LA + + +L P V+ E+ G+ +S A
Sbjct: 323 ILDPALLRPGRFDRQIVVPLPDLP--ERLAILQVHTRGKRLAPDVDLEVMAKGTPGMSGA 380
Query: 385 EIGELM 390
++ L+
Sbjct: 381 DLANLV 386
>sp|B1ZMG6|FTSH_OPITP ATP-dependent zinc metalloprotease FtsH OS=Opitutus terrae (strain
DSM 11246 / PB90-1) GN=ftsH PE=3 SV=1
Length = 614
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 25/260 (9%)
Query: 182 PFTHPSTFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFA 241
P T +F +++ + K+ V +E FL+ + + G + LL GP GTGK+ A
Sbjct: 166 PVTSGVSFSSVAGCDEAKDEVYEVVE-FLRDPARFRQTGGRMPKGVLLVGPPGTGKTMLA 224
Query: 242 AAMASFMSYDVYD------VDLSRVADDADLKSLL--LQTTSKSVILIEDLDRFLVEKPA 293
A+A + Y V+L + ++SL + T+ S+I I+++D ++ A
Sbjct: 225 KAVAGEARANFYSLSGSDFVELYVGVGASRVRSLFKKARETAPSIIFIDEIDAIGRQRSA 284
Query: 294 AVSLSGVLNFMDGVLNSCCF-------EERVMVF-TMNSKDHVDQALLRPGRIDVHIHFP 345
A S G D LN+ ++ V+VF N D +D+ALLRPGR D +
Sbjct: 285 AES-GGAQQEHDQTLNALLVAMDGFDSDDAVVVFGATNRPDTMDRALLRPGRFDRQVSVG 343
Query: 346 LCDFSSFKTLASSYLGLKDHKLFPQV--EEIFQNGSSLSPAEIGELMIANRNSPSRALKS 403
L D + + G KL P V +EI + S A++ L+ N + A
Sbjct: 344 LPDLRGRLAILQVHAG--SVKLDPSVDLQEIAKATPGFSGADLANLL--NEGAIHAARHR 399
Query: 404 VITALQTD-GEGRGAANAGR 422
T L +D E R N GR
Sbjct: 400 RATILHSDLDEARDKINWGR 419
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 187 STFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS 246
+TF ++ + K + S++ FLKA Y +LG R LL GP GTGK+ A A+A
Sbjct: 152 ATFRDVAGNAEAKTEL-SEIVDFLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAG 210
Query: 247 FMSYDVYDVDLSRVAD------DADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAVSLS 298
S + S + A ++ L Q K ++ I++LD + S+
Sbjct: 211 EASVPFFSASGSEFVEMFVGVGAARVRDLFSQAREKGACLVFIDELDAVGKVRGLGGSVG 270
Query: 299 G----------VLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
G +L MDG V++ N + +D ALLRPGR D +H D
Sbjct: 271 GHDEREQTLNQLLTEMDGFDAHTAM---VVIGATNRAEILDPALLRPGRFDRRVHIDRPD 327
Query: 349 FSSFKTL 355
+ K +
Sbjct: 328 LAERKEI 334
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
T+D I + ++ +E LK + G R LLYGP GTGK+ A A+A+
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 248 MSYDVYDVDLSRVAD------DADLKSLLLQTTSK--SVILIEDLDRFLVEKPAAVS--- 296
+ V ++ + +A L+ + + T + S+I I++LD ++ A +
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVE 470
Query: 297 ---LSGVLNFMDGVLNSCCFEERVMVFTMNSKDH-VDQALLRPGRIDVHIHF 344
++ +L MDG+ S E +V+V ++ H +D AL RPGR D I
Sbjct: 471 KRVVASLLTLMDGI-GSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 158 KRDLRLFVNLRNDRDGCCGRWRSVPFTHPSTFDTISMETDLKNRVKSDLESFLKAKHYYH 217
K L+ F+ ND R ++ + S D +E+ +K +++ +E LK +
Sbjct: 596 KITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLES-IKLKLEQAVEWPLKHPESFI 654
Query: 218 RLGRVWKRSYLLYGPSGTGKSSFAAAMAS-----FMS------YDVYDVDLSRVADDADL 266
R+G + LLYGP G K+ A A+A+ F++ + Y + R +
Sbjct: 655 RMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFR 714
Query: 267 KSLLLQTTSKSVILIEDLDRFLVEKPAAVS--------LSGVLNFMDGVLNSCCFEERVM 318
K+ + + S+I ++LD VE+ +++ L+ +L MDG+ ++ +
Sbjct: 715 KA---RAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQ---LKDVTI 768
Query: 319 VFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
+ N D +D+AL+RPGRID I+ PL D ++ + +
Sbjct: 769 LAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREI 805
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 16/172 (9%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
T+D I ++ +E LK + G R LLYGP GTGK+ A A+A+
Sbjct: 351 TYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANE 410
Query: 248 MSYDVYDVDLSRVAD------DADLKSLLLQTTSK--SVILIEDLDRFLVEKPAAVS--- 296
+ V ++ + +A L+ + + T + S+I I++LD ++ A S
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVE 470
Query: 297 ---LSGVLNFMDGVLNSCCFEERVMVF-TMNSKDHVDQALLRPGRIDVHIHF 344
++ +L MDG+ S E RV+V N +D AL RPGR D I
Sbjct: 471 KRVVASLLTLMDGI-GSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 197 DLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS-----FMS-- 249
++K ++K +E LK ++R+G + LLYGP G K+ A A+A+ F++
Sbjct: 634 NIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIK 693
Query: 250 ----YDVYDVDLSRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVSLSGVLNFMD 305
+ Y + R + K+ + + S+I ++LD VE+ ++ SG N D
Sbjct: 694 GPELMNKYVGESERAVREIFRKA---RAVAPSIIFFDELDALAVERGSS---SGAGNVAD 747
Query: 306 GVLNSCCFE-------ERVMVFT-MNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
VL E + V V N D +D+AL+RPGRID I+ PL D ++ + +
Sbjct: 748 RVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREI 805
>sp|Q9BVQ7|SPA5L_HUMAN Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens
GN=SPATA5L1 PE=1 SV=2
Length = 753
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 186 PSTFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA 245
P ++ I D+K ++K +E LK + R+G + LLYGP G K++ A+A
Sbjct: 460 PVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALA 519
Query: 246 -----SFMSYDVYDVDLSRVADDADLKSLLL---QTTSKSVILIEDLDRFLVEKPAAVS- 296
SF+S D+ V D + S + + ++ +++ ++++D L + A+ +
Sbjct: 520 TSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTG 579
Query: 297 -------LSGVLNFMDGV-LNSC--------------CFEERVMVF-TMNSKDHVDQALL 333
LS +LN +DGV L + F VM+ N D +D ALL
Sbjct: 580 CDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALL 639
Query: 334 RPGRIDVHIHFPLCD 348
RPGR+D I+ P D
Sbjct: 640 RPGRLDKIIYIPPPD 654
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 219 LGRVWKRSYLLYGPSGTGKSSFAAAMA-----SFMSYDVYDVDLSRVADDAD------LK 267
LG R LL GP G GK+ A+A ++ + SR + + +
Sbjct: 229 LGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQR 288
Query: 268 SLLLQTTSKSVILIEDLDRFLVEK----PAAVSLSGVLNFMDGVLNSCCFEERVMVFTMN 323
+ L + S++ ++++D ++ P + ++ VL +DG E V+V N
Sbjct: 289 ARELASRGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLDGASGD---REVVVVGATN 345
Query: 324 SKDHVDQALLRPGRIDVHI 342
D +D AL RPGR D +
Sbjct: 346 RPDALDPALRRPGRFDREV 364
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 25/242 (10%)
Query: 189 FDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFM 248
FD ++ + K ++ ++ +FLK + +G + LL GP GTGK+ A A+A
Sbjct: 171 FDDVAGIDEAKEELQ-EVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 249 SYDVYDVDLSRVAD------DADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAV----- 295
+ + S + + ++ L + + +I I+++D ++ A +
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGND 289
Query: 296 ----SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
+L+ +L MDG + +++ N D +D AL+RPGR D + D+S
Sbjct: 290 EREQTLNQLLTEMDGFEGNTGI---IIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSG 346
Query: 352 FKTLASSYLGLKDHKLFPQV--EEIFQNGSSLSPAEIGELMIANRNSPSRALKSVITALQ 409
K + + ++ KL P+V + I + S A++ L+ +R KS IT L+
Sbjct: 347 RKEILEVH--ARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLE 404
Query: 410 TD 411
D
Sbjct: 405 ID 406
>sp|C8W731|FTSH_ATOPD ATP-dependent zinc metalloprotease FtsH OS=Atopobium parvulum
(strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546)
GN=ftsH PE=3 SV=1
Length = 644
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
TF ++ + + K ++ ++ SFLK Y +G R LL GP GTGK+ A A+A
Sbjct: 182 TFKDVAGQEEAKESMQ-EIVSFLKTPDKYKEIGARCPRGALLVGPPGTGKTLIAKAVAGE 240
Query: 248 MSYDVYDVDLSRVAD------DADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAV---- 295
+ + S + A ++ L Q K+ +I I+++D + A++
Sbjct: 241 AGVPFFQIAGSEFVEMFVGRGAAKVRDLFKQANEKAPCIIFIDEIDAVGKRRDASLNSND 300
Query: 296 ----SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
+L+ +L+ MDG N V++ N + +D+ALLRPGR D I L D
Sbjct: 301 EREQTLNQLLSEMDGFDNHKGI---VVLAATNRPETLDKALLRPGRFDRRIPVELPDLKG 357
Query: 352 FKTLASSYLGLKDHKLFPQVE 372
+ + + D K+ P V+
Sbjct: 358 REAVLQIH--ANDVKMEPGVD 376
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 202 VKSDLES---FLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLS 258
VK+DL+ FLK + +LG + LL GP GTGK+ A A+A + V+ S
Sbjct: 205 VKADLQEIVDFLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGEADVPFFSVNGS 264
Query: 259 R-----VADDADLKSLLLQTT---SKSVILIEDLDRFLVEKPAAV---------SLSGVL 301
V A L +T S S+I I+++D ++ A + +L+ +L
Sbjct: 265 EFIQMFVGVGASRVRDLFKTAKEQSPSIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQIL 324
Query: 302 NFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHI 342
MDG + +++ N D +D ALLRPGR D H+
Sbjct: 325 GEMDGFGGAQAV---IVIAATNRPDVLDPALLRPGRFDRHV 362
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA-- 245
++D I + ++ +E LK + ++G + LLYGP GTGK+ A A+A
Sbjct: 177 SYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANH 236
Query: 246 ---SFMSYDVYDVDLSRVADDADLKSLLLQ---TTSKSVILIEDLDRFLV---------E 290
+F+ ++ + + A L L + + S+I I+++D +
Sbjct: 237 ADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGD 296
Query: 291 KPAAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+ +L+ +L MDG ++ ++ N KD +D ALLRPGR D HI PL D
Sbjct: 297 REVQRTLTQLLAEMDGF---DPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPD 351
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog OS=Dictyostelium
discoideum GN=psmC4 PE=1 SV=1
Length = 403
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 199 KNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDV--- 255
K ++ +E L + Y ++G R LLYGP GTGK+ A A+A S V
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGS 218
Query: 256 --------DLSRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVS---------LS 298
+ R+ D L + S ++I I+++D ++ A + L
Sbjct: 219 EFVQKYLGEGPRLVRDV---FRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILM 275
Query: 299 GVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+LN MDG S + ++ N +D +D ALLRPGR+D I FPL D
Sbjct: 276 ELLNQMDGFDVSVNVK---VIMATNRQDTLDPALLRPGRLDRKIEFPLPD 322
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
TF ++ E + K + + + FLK YHR+G R LL GP GTGK+ A A+A
Sbjct: 249 TFADVAGEEEAKAEL-AQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGE 307
Query: 248 MSYDVYDVDLSRVAD------DADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAV---- 295
+ V S + + ++ L + + S+I I++LD ++ A +
Sbjct: 308 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGN 367
Query: 296 -----SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+L+ +L MDG + V++ N D +D ALLRPGR D + L D
Sbjct: 368 DEREQTLNQLLVEMDGF---EAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 422
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 192 ISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS----- 246
I + +LK ++K ++ L+A + RLG + LLYGP G K+ A A+A+
Sbjct: 518 IGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGIN 577
Query: 247 FMS------YDVYDVDLSRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVS---- 296
F++ ++ Y + R + K+ ++ + S+I +++D ++ + +
Sbjct: 578 FLAVKGPEIFNKYVGESERAIREIFRKA---RSAAPSIIFFDEIDALSPDRDGSSTSAAN 634
Query: 297 --LSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
L+ +LN +DGV + V+V N D +D ALLRPGR+D HI+ D ++
Sbjct: 635 HVLTSLLNEIDGVEE---LKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNA 688
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 202 VKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSRVA 261
+KS +E L + G R LL+GP GTGK+ +A+ + V ++ +
Sbjct: 257 LKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIV 316
Query: 262 D------DADLKSLLLQTT--SKSVILIEDLDRFLVEKPAAVS-------LSGVLNFMDG 306
+A L+ + + S+I I+++D + S ++ +L MDG
Sbjct: 317 SKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDG 376
Query: 307 VLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
+ + V++ N + VD AL RPGR D + + D +
Sbjct: 377 M---GAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDA 418
>sp|D1C2C6|FTSH2_SPHTD ATP-dependent zinc metalloprotease FtsH 2 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH2 PE=3
SV=1
Length = 652
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 25/186 (13%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAM--- 244
TFD ++ ++K V +D+ +L+ + RLG R LL GP GTGK+ A+
Sbjct: 158 TFDDVAGAEEVKEEV-ADIVDYLRDPERFRRLGARIPRGVLLTGPPGTGKTLLTRALAGE 216
Query: 245 --ASFMSYDVYD-VDLSRVADDADLKSLL--LQTTSKSVILIEDLD-----RFLVEKPAA 294
ASF S + V+L + ++ L + + ++I I+++D R +E+ +
Sbjct: 217 ARASFFSVSGSEFVELYVGVGASRVRELFRKAKENAPAIIFIDEIDAIGRRRGRMEQSSE 276
Query: 295 V--SLSGVLNFMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDF 349
+L+ +L MDG FEER V+V N D +D ALLRPGR D + L D
Sbjct: 277 YDQTLNQILVEMDG------FEERTTVVVVAATNRVDILDPALLRPGRFDRKVVVDLPDR 330
Query: 350 SSFKTL 355
+ + +
Sbjct: 331 KARRAI 336
>sp|A1TZE0|FTSH_MARAV ATP-dependent zinc metalloprotease FtsH OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=ftsH PE=3 SV=1
Length = 633
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 184 THPSTFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAA 243
T +T D ++ K + S++ FLK+ Y RLG V + LL GP GTGK+ A A
Sbjct: 180 TSTTTLDDVAGIESAKRDI-SEIIDFLKSPDKYRRLGAVMPKGVLLVGPPGTGKTLLARA 238
Query: 244 MASFMSYDVYDVDLSR-----VADDADLKSLLLQTTSK---SVILIEDLDRFLVEKPAAV 295
+A + + S V A + QT K ++I I++LD + A +
Sbjct: 239 IAGEAEVPFFSISASEFIEMFVGVGAARVRDMFQTARKEAPALIFIDELDAVGRSRGAGL 298
Query: 296 ---------SLSGVLNFMDGVLNSCCFE--ERVMVF-TMNSKDHVDQALLRPGRIDVHI 342
+L+ +L MDG FE E V+V N D +D ALLRPGR D I
Sbjct: 299 GGGHDEREQTLNQILTEMDG------FEAHENVLVLAATNRPDVLDTALLRPGRFDRKI 351
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 186 PSTFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA 245
P+TF+ ++ + + V+ ++ FLK Y LG + LL GP GTGK+ A A+A
Sbjct: 247 PTTFEDVAGIEEAVDEVR-EVVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 246 S-----FMSYDVYD-VDLSRVADDADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAV-- 295
F S D V++ A ++ + Q +++ +I I++LD + +V
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDALGKSRSGSVVG 365
Query: 296 -------SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+L+ +L MDG ++ ++V N + +D ALLRPGR D H+ D
Sbjct: 366 GHDEREQTLNALLVEMDGFDSNSGV---IVVAATNRPETLDPALLRPGRFDRHVLVDRPD 422
Query: 349 FSSFKTLASSYLGLKDHKLFPQVE 372
+ + + + + +K+ KL VE
Sbjct: 423 VAGREEILAVH--VKNVKLDETVE 444
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 209 FLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS-----FMSYDVYD-VDLSRVAD 262
FL++ Y +LG + LL GP GTGK+ A A+A F S D V++
Sbjct: 240 FLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSDFVEMFVGVG 299
Query: 263 DADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAV---------SLSGVLNFMDGVLNSC 311
A ++ + Q +K+ +I I++LD + A + +L+ +L MDG ++
Sbjct: 300 AARVRDMFQQAEAKAPCIIFIDELDALGKSRGAGIMGGHDEREQTLNALLVEMDGFGSNS 359
Query: 312 CFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYLGLKDHKLFPQV 371
+++ N + +D ALLRPGR D H+ D + + + +K+ KL P V
Sbjct: 360 GV---IVMAATNRPETLDPALLRPGRFDRHVLVDRPDIKGREDILKVH--VKNVKLDPTV 414
Query: 372 EEIFQNGSSLSPAEIG 387
+ ++++P +G
Sbjct: 415 D--LHKVAAITPGFVG 428
>sp|A9KIG5|FTSH_CLOPH ATP-dependent zinc metalloprotease FtsH OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=ftsH PE=3 SV=1
Length = 577
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 205 DLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYD------VDLS 258
D+ F+K Y LG + +LYGP GTGK+ A A+A+ Y V +
Sbjct: 160 DIIDFIKEPEKYSALGARMPKGVMLYGPPGTGKTLIAKAIATEAGVPFYAMSGSDFVQMY 219
Query: 259 RVADDADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAVSLSGVLNFMDGVLNSCCFEER 316
+ +++L + + K+VI I+++D + K A S S + D LN+ E
Sbjct: 220 VGVGASRIRTLFNKAKKSEKAVIFIDEIDA--IGKKRARSTSASNDERDQTLNALLTEMS 277
Query: 317 --------VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSY 359
V++ N D +D+ALLRPGR D I L D + K + Y
Sbjct: 278 GFHENKGIVVIGATNRLDTLDEALLRPGRFDRQIEVGLPDILARKKILKLY 328
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
+K +E L YY +G + +LYGP GTGK+ A A+A+ S V S
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 260 -----VADDADLKSLLLQTTSK---SVILIEDLDRFLV---------EKPAAVSLSGVLN 302
+ D L L + + S++ I+++D E+ ++ +LN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
+DG F+ R ++ N + +D AL+RPGRID I FPL D + K +
Sbjct: 315 QLDG------FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R776 PE=4 SV=1
Length = 314
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 129 KLRKADRRRILRPYLQHIHAVSDELEQKKKRDLRLFVNLRNDRDGCCGRWRSVPFTHPST 188
+++K R L+ ++ +H++S + ++R+ N+ W P
Sbjct: 120 QIKKQTNR--LKKFIDSVHSIS-----CRPDEMRMCYTSNNNN------WSYPIIRRPCK 166
Query: 189 FDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFM 248
F ++ T++++ +K D++ F++ + Y LG ++R LLYG SG GK+ + +++
Sbjct: 167 FLDSNLTTEMRSVLK-DVDVFMRNEDTYRELGANYRRGMLLYGESGCGKTGLISIISNKY 225
Query: 249 SYDVYDVDL-SRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPA----AVSLSGVLNF 303
D Y ++L S+ D+ L SL ++S+++IE++D+ + A VS+ G+L+
Sbjct: 226 GMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQIETLNANGNKNVSIGGLLSA 285
Query: 304 MDG 306
+DG
Sbjct: 286 LDG 288
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
T+D + ++K +K +E + Y + G + L YGP GTGK+ A A+A+
Sbjct: 485 TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATE 544
Query: 248 MSYDVYDVDLSRV------ADDADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAVSLSG 299
+S + V + +++++ + + + +V+ +++LD + K SL
Sbjct: 545 VSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDS--IAKARGGSLGD 602
Query: 300 VLNFMDGVLNSCCFEERVM-----VFTM---NSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
D V+N E M VF + N D +D A+LRPGR+D I+ PL D ++
Sbjct: 603 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENA 662
Query: 352 FKTLASSYL 360
++ ++ L
Sbjct: 663 RLSILNAQL 671
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 201 RVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS-----FMSYDVYDV 255
+++ +E L+ + +G R L+YGP GTGK+ A A+A+ F + +V
Sbjct: 225 QIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEV 284
Query: 256 DLSRVA--DDADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAVS------LSGVLNFMD 305
+S++A +++L+ + + ++I I+++D ++ +S +L MD
Sbjct: 285 -MSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMD 343
Query: 306 GVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSS 351
G+ V++ N + +D AL R GR D + + D +
Sbjct: 344 GMKARSNV---VVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
+K +E L YY +G + +LYGP GTGK+ A A+A+ S V S
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 260 -----VADDADLKSLLLQTTSK---SVILIEDLDRFLV---------EKPAAVSLSGVLN 302
+ D L L + + S++ I+++D E+ ++ +LN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
+DG F+ R ++ N + +D AL+RPGRID I FPL D + K +
Sbjct: 315 QLDG------FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
+K +E L YY +G + +LYGP GTGK+ A A+A+ S V S
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 260 -----VADDADLKSLLLQTTSK---SVILIEDLDRFLV---------EKPAAVSLSGVLN 302
+ D L L + + S++ I+++D E+ ++ +LN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
+DG F+ R ++ N + +D AL+RPGRID I FPL D + K +
Sbjct: 315 QLDG------FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
+K +E L YY +G + +LYGP GTGK+ A A+A+ S V S
Sbjct: 195 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 254
Query: 260 -----VADDADLKSLLLQTTSK---SVILIEDLDRFLV---------EKPAAVSLSGVLN 302
+ D L L + + S++ I+++D E+ ++ +LN
Sbjct: 255 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLN 314
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTL 355
+DG F+ R ++ N + +D AL+RPGRID I FPL D + K +
Sbjct: 315 QLDG------FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRI 364
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 199 KNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDV--- 255
K ++ +E L Y ++G R LLYGP GTGK+ A A+A+ + V
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 223
Query: 256 --------DLSRVADDADLKSLLLQTTSKSVILIEDLD-----RFLVEKPAAVSLSGVL- 301
+ R+ D L + + ++I I+++D RF + A + +L
Sbjct: 224 EFVQKYLGEGPRMVRDV---FRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILM 280
Query: 302 ---NFMDGVLNSCCFEERV---MVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFK-- 353
N MDG F++ V ++ N D +D ALLRPGR+D I FPL D +
Sbjct: 281 ELLNQMDG------FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 334
Query: 354 -TLASSYLGLKDHKLFPQVEEIFQNGSSLSPAEIGEL 389
+ +S + L D +E+ +S AEI +
Sbjct: 335 FQVCTSKMNLSDEV---DLEDYVSRPDKISAAEIAAI 368
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 199 KNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDV--- 255
K ++ +E L Y ++G R LLYGP GTGK+ A A+A+ + V
Sbjct: 170 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 229
Query: 256 --------DLSRVADDADLKSLLLQTTSKSVILIEDLD-----RFLVEKPAAVSLSGVL- 301
+ R+ D L + + ++I I+++D RF + A + +L
Sbjct: 230 EFVQKYLGEGPRMVRDV---FRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILM 286
Query: 302 ---NFMDGVLNSCCFEERV---MVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
N MDG F++ V ++ N D +D ALLRPGR+D I FPL D
Sbjct: 287 ELLNQMDG------FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 333
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
T++ I ++K ++K + L+ KH Y++ + + LLYGP G GK+ A A+A+
Sbjct: 932 TWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANE 991
Query: 248 MSYDVYDVDLSRV------ADDADLKSLL--LQTTSKSVILIEDLDRFLVEKPAAVS--- 296
+ V + +A+++ L + S +I +++D E+ + +
Sbjct: 992 CKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 297 ----LSGVLNFMDGVLNSCCFEERVMVFTM---NSKDHVDQALLRPGRIDVHIHFPLCDF 349
++ +L +DG+ E+ +F + N D +D+AL RPGR+D I+ L D
Sbjct: 1052 SDRVINQILTEIDGI------NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDL 1105
Query: 350 SS 351
S
Sbjct: 1106 KS 1107
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
N+++ +E LK + +G + L++G GTGK+S A A+A+ + Y ++
Sbjct: 537 NKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPE 596
Query: 260 V------ADDADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAVS------LSGVLNFMD 305
+ + L+ + + + K+ +I I+++D ++ + + +S +L MD
Sbjct: 597 IMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMD 656
Query: 306 GVLNSCCFEERVMVF-TMNSKDHVDQALLRPGRIDVHIHFPLCD 348
G+ + V+V N + +D AL R GR D I P+ D
Sbjct: 657 GLKKN----NNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPD 696
>sp|P39925|AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AFG3 PE=1 SV=1
Length = 761
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 16/152 (10%)
Query: 209 FLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSRVAD------ 262
FLK Y +LG R +L GP GTGK+ A A A + V S +
Sbjct: 306 FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVG 365
Query: 263 DADLKSLLLQTTS--KSVILIEDLDRFLVEKPAAVSLSGVLNFMDGVLNSCCFE------ 314
+ ++ L Q S S+I I+++D E+ +L G + + LN E
Sbjct: 366 ASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTT 425
Query: 315 --ERVMVFTMNSKDHVDQALLRPGRIDVHIHF 344
+ V++ N D +D AL+RPGR D HI
Sbjct: 426 SDQVVVLAGTNRPDVLDNALMRPGRFDRHIQI 457
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 187 STFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA- 245
ST+D I +K +E +K + LG + LLYGP GTGK+ A A+A
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 246 ----SFMSYDVYDVDLSRVADDADLKS---LLLQTTSKSVILIEDLDRFLVEKPAAVSLS 298
+F+ ++ + + + + ++ + + S+I ++++D + + S +
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 299 G----------VLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFP 345
G +LN +DG S + ++ N D +DQALLRPGRID I FP
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIK---VLMATNRIDILDQALLRPGRIDRKIEFP 331
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 187 STFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA- 245
ST+D I +K +E +K + LG + LLYGP GTGK+ A A+A
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
Query: 246 ----SFMSYDVYDVDLSRVADDADLKS---LLLQTTSKSVILIEDLDRFLVEKPAAVSLS 298
+F+ ++ + + + + ++ + + S+I ++++D + + S +
Sbjct: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
Query: 299 G----------VLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFP 345
G +LN +DG S + ++ N D +DQALLRPGRID I FP
Sbjct: 278 GDSEVQRTMLELLNQLDGFEASNKIK---VLMATNRIDILDQALLRPGRIDRKIEFP 331
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 26/169 (15%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSR 259
+K +E L YY +G + +LYGP GTGK+ A A+A+ S V S
Sbjct: 194 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 253
Query: 260 -----VADDADLKSLLLQTTSK---SVILIEDLDRFLV---------EKPAAVSLSGVLN 302
+ D L L + + S++ I+++D E+ ++ +LN
Sbjct: 254 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 313
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+DG F+ R ++ N + +D AL+RPGRID I FPL D
Sbjct: 314 QLDG------FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 163 LFVNLRNDRDGCCGRWRSV-----PFTHPSTFDTISMETDLKNRVKSDLESFLKAKHYYH 217
LF + + G G RS P P TF ++ ++K ++ ++ +LK Y
Sbjct: 120 LFAWAQKRQAGAFGLARSTVKPLAPGESPVTFADVAGMDEVKGELE-EIVDYLKNPDKYR 178
Query: 218 RLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSRVAD------DADLKSLLL 271
+G + LLYGP GTGK+ A A+A + + S + + ++ L
Sbjct: 179 AIGARIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFALSGSSFVELFVGMGASRVRELFA 238
Query: 272 QT--TSKSVILIEDLDRFLVEKPAAVSLSG----------VLNFMDGVLNSCCFEERVMV 319
Q + ++ I+++D ++ +A + G +L MDG +E +++
Sbjct: 239 QARKNAPCIVFIDEIDAVGRQRGSAAVVGGHDEREQTLNQLLTEMDGF---GAYEGVIVM 295
Query: 320 FTMNSKDHVDQALLRPGRIDVHI 342
N D +D+ALLRPGR D I
Sbjct: 296 AATNRPDVLDKALLRPGRFDRQI 318
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 42/252 (16%)
Query: 200 NRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAM-----ASFMSYDVYD 254
N V+ +E LK + ++G + LLYGP GTGK+ A A+ A FM +
Sbjct: 188 NEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSE 247
Query: 255 VDLSRVADDADLKSLLLQTTSK---SVILIEDLDRFLVEKPAA---------VSLSGVLN 302
+ + + A L L K ++I I+++D + A +L +L
Sbjct: 248 LVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLA 307
Query: 303 FMDGVLNSCCFEER---VMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFS---SFKTLA 356
MDG FE R ++ N D +D+ALLRPGR D I PL D S +
Sbjct: 308 GMDG------FETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVH 361
Query: 357 SSYLGLKDHKLFPQVEEIFQ--NGSSLSPAEIGELMIANRNS-PSRALKSVITALQ---- 409
+ L +++ P++ + + NG+ L + M A RN P+ + ++A++
Sbjct: 362 TRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKVRL 421
Query: 410 ------TDGEGR 415
TD EGR
Sbjct: 422 DFSHSPTDSEGR 433
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 210 LKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLSRVA------DD 263
++ YH LG V R LL+GP G GK+ A A+A + + V + +
Sbjct: 284 MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESE 343
Query: 264 ADLKSLLLQTTSKS--VILIEDLDRFLVEKPAAVS------LSGVLNFMDGVLNSCCFEE 315
L+ L Q S + +I I+++D ++ A ++ +L MD LN+
Sbjct: 344 QKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDD-LNNVAATA 402
Query: 316 RVMVF-TMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYLGLKDHKL-FPQVEE 373
RV+V N D +D AL R GR D I + D +S + + + KL PQ +
Sbjct: 403 RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLC----RKLRLPQAFD 458
Query: 374 IFQNGSSLSPAEIG-ELMIANRNSPSRALKSVITALQ 409
F + + L+P +G +LM R + A+ V+ LQ
Sbjct: 459 -FCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 494
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMA-- 245
T+ I D++ + + + ++ + LG V LL GP G GK+ A A+A
Sbjct: 579 TWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANE 638
Query: 246 ---SFMSYDVYDVDLSRVADDADLKSLLLQTTSKS---VILIEDLDRFLV-----EKPAA 294
+F+S ++ V + + Q S VI +++D E A+
Sbjct: 639 SGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGAS 698
Query: 295 VS-LSGVLNFMDGVLNSCCFEERVMVFTM---NSKDHVDQALLRPGRID 339
V ++ +L MDG E R VF M N D +D A+LRPGR+D
Sbjct: 699 VRVVNQLLTEMDG------LEARQQVFIMAATNRPDIIDPAILRPGRLD 741
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 413
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 199 KNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDV--- 255
K ++ +E L Y ++G R LLYGP GTGK+ A A+A + V
Sbjct: 169 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGS 228
Query: 256 --------DLSRVADDADLKSLLLQTTSKSVILIEDLD-----RFLVEKPAAVSLSGVL- 301
+ R+ D L + + ++I I+++D RF + A + +L
Sbjct: 229 EFVQKYLGEGPRMVRDV---FRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILM 285
Query: 302 ---NFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
N MDG + + ++ N D +D ALLRPGR+D I FPL D
Sbjct: 286 ELLNQMDGFDQTVNVK---VIMATNRADTLDPALLRPGRLDRKIEFPLPD 332
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
TF ++ + K ++ ++ FLK H + RLG + LL GP GTGK+ A A+A
Sbjct: 152 TFQDVAGIEEAKEELQ-EVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGE 210
Query: 248 MSYDVYDVDLSRVAD------DADLKSLLLQ--TTSKSVILIEDLDRFLVEKPAAV---- 295
+ +++ S + A ++ + Q + +I I+++D + A +
Sbjct: 211 ANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGH 270
Query: 296 -----SLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDF 349
+L+ +L MDG ++ E +MV N D +D ALLRPGR D + P D
Sbjct: 271 DEREQTLNQLLVEMDGFEST---EGVIMVAATNRPDVLDPALLRPGRFDRQVTVPNPDI 326
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 200 NRVKSDLES---FLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMAS-------FMS 249
+ K +LE FL+ ++ RLG R LL GP GTGK+ A A+A FMS
Sbjct: 273 DEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMS 332
Query: 250 YDVYDVDLSRVADDADLKSLLL--QTTSKSVILIEDLDRFLVEKPA--AVSLSGVLNFM- 304
+D ++ ++ L + + S+I I++LD ++ A A + LN +
Sbjct: 333 GSQFD-EMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAAHMRQTLNQLL 391
Query: 305 ---DGV-LNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
DG N V + N + +D AL RPGR D HIH PL D
Sbjct: 392 VDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPD 439
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU08_1970 PE=1 SV=1
Length = 387
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 199 KNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASFMSYDVYDVDLS 258
K +K +E L Y ++G + LLYGP GTGK+ A+A+ V+ S
Sbjct: 143 KQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGS 202
Query: 259 -----------RVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVS---------LS 298
R+ D L + + S++ I+++D ++ A + L
Sbjct: 203 EFVQKYLGEGPRMVRDV---FRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLI 259
Query: 299 GVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+LN MDG + + ++ N D +D ALLRPGR+D I FPL D
Sbjct: 260 ELLNQMDGFDPAANVK---VIMATNRADTIDPALLRPGRLDRKIEFPLPD 306
>sp|P53549|PRS10_YEAST 26S protease subunit RPT4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPT4 PE=1 SV=4
Length = 437
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 188 TFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSFAAAMASF 247
TFD I T+ ++ +E LK + R+G + LLYGP GTGK+ A A+A+
Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238
Query: 248 MSYDVYDVDLSRVADDADLKSLLL--------QTTSKSVILIEDLD-----RF----LVE 290
+ + S + D +S + + +I ++++D RF +
Sbjct: 239 IGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSAD 298
Query: 291 KPAAVSLSGVLNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCD 348
+ +L +L MDG N + ++ N D +D ALLRPGR+D + PL +
Sbjct: 299 REIQRTLMELLTQMDGFDN---LGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,627,144
Number of Sequences: 539616
Number of extensions: 7335583
Number of successful extensions: 26141
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 544
Number of HSP's that attempted gapping in prelim test: 25012
Number of HSP's gapped (non-prelim): 1217
length of query: 480
length of database: 191,569,459
effective HSP length: 121
effective length of query: 359
effective length of database: 126,275,923
effective search space: 45333056357
effective search space used: 45333056357
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)