BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011668
(480 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 368/494 (74%), Positives = 408/494 (82%), Gaps = 39/494 (7%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FAEPG+P YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKRVRLV DK+ NK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINK 180
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 237
PRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 240
Query: 238 GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHD 297
GEEVNQR+SGREQ+ SRS EPR+REDRH DRDRE SRERGRD++RERE+S E SH+
Sbjct: 241 GEEVNQRHSGREQQ----QSRSEEPRVREDRHADRDREISRERGRDKDRERERSREHSHE 296
Query: 298 RPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK 357
R RDRDHR+DRHHRDRDR RDR+R+R+R R+R RDR R RDR R+RGRD +RDRE DR +
Sbjct: 297 RVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRHR 356
Query: 358 ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDD 417
ERDRD YEVGDP DRG SRDR+SDYDR++SK HGER++D + EDD
Sbjct: 357 ERDRD----------YEVGDP--DRGRSRDRESDYDRVESK-----HGERNHD-YEPEDD 398
Query: 418 RGWYDHHENYEHHRGYGDHD----RYNQYH--DDDNDRYDQM-----EEDDYRYDRATSE 466
RG H YEH R + D D RY+ Y+ DD D Y+Q EDDY RATSE
Sbjct: 399 RG---RHNQYEHGRRHADPDHDPERYDHYNHGDDHGDHYNQYRDHDGMEDDYHAGRATSE 455
Query: 467 SRDKERTRDLDREY 480
S +KER+ D+DREY
Sbjct: 456 SHEKERSHDVDREY 469
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 356/500 (71%), Positives = 399/500 (79%), Gaps = 52/500 (10%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FA+PGDP YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKRVRLV DK+TNK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNK 180
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 237
PRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 240
Query: 238 GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHD 297
GEEVNQR+SGREQ+ SRS EPR+REDRH DRDRE SRER RD+++ERE+S E S++
Sbjct: 241 GEEVNQRHSGREQQ----QSRSEEPRVREDRHSDRDREISRERVRDKDKERERSREHSNE 296
Query: 298 RPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK 357
R RDRD R+DR RDR R R+R+R+R R+RDR R RDR R R+RGRD +RDRE DR +
Sbjct: 297 RVRDRDQREDR--HHRDRDRTRDRDRERDRDRDRGRDRDRARDRERGRDRDRDREYDRHR 354
Query: 358 ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDD 417
ERDRD YEVG + DRG SRDR+S Y+R++SK HGER++D + EDD
Sbjct: 355 ERDRD----------YEVG--ETDRGRSRDRESHYNRVESK-----HGERNHD-YEPEDD 396
Query: 418 RG---WYDH--------HENYEHHRGY------GDHDRYNQYHDDDNDRYDQMEEDDYRY 460
RG Y+H H+ EH+ Y GDH YNQY D D EDDY
Sbjct: 397 RGRQNQYEHGHRHADPDHDTTEHYDPYNHGDDRGDH--YNQYPDPDR------MEDDYHA 448
Query: 461 DRATSESRDKERTRDLDREY 480
RATSES +KER+ D+DREY
Sbjct: 449 GRATSESHEKERSHDVDREY 468
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/306 (86%), Positives = 286/306 (93%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAV+ TK QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKP
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFV+ FAEPGDP YAPPV++AETP +RRARIH+LRLEKGAEKAAEE
Sbjct: 61 PPEKRKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAETPTQRRARIHQLRLEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L+KYDP++DPN+SGDPYKTLFVARL+YETTES+IKREFESYGPIKRVRL+TDK NKPRG
Sbjct: 121 LQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
VNQR SGRE + S G SRS EPR REDR+ +RDRE+SRERGRDRE+EREKS E SH+RPR
Sbjct: 241 VNQRNSGRELQQSGGSSRSEEPRPREDRYNERDREKSRERGRDREKEREKSREHSHERPR 300
Query: 301 DRDHRD 306
DRDH++
Sbjct: 301 DRDHKE 306
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 354/494 (71%), Positives = 392/494 (79%), Gaps = 56/494 (11%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FAEPG+P YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKRVRLV DK+ NK
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINK 180
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 237
PRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG
Sbjct: 181 PRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 240
Query: 238 GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHD 297
GEEVNQR+SGR RDRE SRERGRD++RERE+S E SH+
Sbjct: 241 GEEVNQRHSGRSS---------------------RDREISRERGRDKDRERERSREHSHE 279
Query: 298 RPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK 357
R RDRDHR+DRHHRDRDR RDR+R+R+R R+R RDR R RDR R+RGRD +RDRE DR +
Sbjct: 280 RVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRTRDRDRERGRDRDRDREYDRHR 339
Query: 358 ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDD 417
ERDRD YEVGDP DRG SRDR+SDYDR++SK HGER++D + EDD
Sbjct: 340 ERDRD----------YEVGDP--DRGRSRDRESDYDRVESK-----HGERNHD-YEPEDD 381
Query: 418 RGWYDHHENYEHHRGYGDHD----RYNQYH--DDDNDRYDQM-----EEDDYRYDRATSE 466
RG H YEH R + D D RY+ Y+ DD D Y+Q EDDY RATSE
Sbjct: 382 RG---RHNQYEHGRRHADPDHDPERYDHYNHGDDHGDHYNQYRDHDGMEDDYHAGRATSE 438
Query: 467 SRDKERTRDLDREY 480
S +KER+ D+DREY
Sbjct: 439 SHEKERSHDVDREY 452
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/303 (85%), Positives = 281/303 (92%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPPLTGMAQFVS+FAEP DP YAPPV+K ETP ERRARIH LR+EKGAEKAAEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L KY +DPNV+GDPYKTLFVARL+YETTES+IKREFESYGPIKRVRL+TDK T KP+G
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEYMH RDMKAAYKQADGRK+DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
+QR+SGREQ+ S PSRS EPR+REDRHG+RDRE+S ++GRDRER+REKS E SH+R +
Sbjct: 241 NSQRHSGREQQQSGAPSRSEEPRVREDRHGERDREKSYDKGRDRERDREKSREHSHERSK 300
Query: 301 DRD 303
+RD
Sbjct: 301 ERD 303
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/277 (88%), Positives = 261/277 (94%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDA MRN NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQF S+FAEPG+P Y+PPV+KAETP +RRARIHKLRLEKGAEKA EE
Sbjct: 61 PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YGPIKRVRL+TDKET+KPRG
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 277
VN +YSGREQ+P GP RS EPR REDRHGDRDRE+S
Sbjct: 241 VNPKYSGREQQPVGGPPRSEEPRTREDRHGDRDREKS 277
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/277 (88%), Positives = 261/277 (94%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDA MRN NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQF S+FAEPG+P Y+PPV+KAETP +RRARIHKLRLEKGAEKA EE
Sbjct: 61 PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YGPIKRVRL+TDKET+KPRG
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 277
VN +YSGREQ+P GP RS EPR REDRHGDRDRE+S
Sbjct: 241 VNPKYSGREQQPVGGPPRSEEPRTREDRHGDRDREKS 277
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/277 (87%), Positives = 261/277 (94%), Gaps = 1/277 (0%)
Query: 6 DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKR 65
D +RNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKPPPEKR
Sbjct: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
Query: 66 KCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYD 125
KCPPLTGMAQFVS FAEPG+P Y+PPV ETP ERRAR+HKLRLEKGA KAAEEL+KYD
Sbjct: 63 KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122
Query: 126 PHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIE 185
PHNDPN+SGDPYKTLFVARLSYETTES+IKREFESYG IKRVRLVTD E+NKPRGYAFIE
Sbjct: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIE 182
Query: 186 YMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRY 245
Y+HTRDMKAAYKQADGRK++GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG+EVNQR+
Sbjct: 183 YLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRH 242
Query: 246 SGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGR 282
SGREQ+ S GPSRS EPR+RE+RH DRDRE+SRERG+
Sbjct: 243 SGREQQQS-GPSRSEEPRVREERHADRDREKSRERGK 278
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/273 (87%), Positives = 255/273 (93%), Gaps = 1/273 (0%)
Query: 5 NDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEK 64
ND +RNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLT NLLKLFEPR PLEYKPPPEK
Sbjct: 6 NDPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKPPPEK 65
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RKCPPLTGMAQFVS FAEPG+P Y+PPV ETP ERRAR+HKLRLEKGA KAAEEL+KY
Sbjct: 66 RKCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKY 125
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFI 184
DPH DPN+SGDPYKTLFVARLSYETTES+IKREFESYG IKRVRLVTD E+NKPRGYAFI
Sbjct: 126 DPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFI 185
Query: 185 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR 244
EY+HTRDMKAAYKQADGRK++GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR
Sbjct: 186 EYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR 245
Query: 245 YSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 277
+SGREQ+ S GPSRS EPR+REDRH DRDRE+S
Sbjct: 246 HSGREQQQS-GPSRSEEPRVREDRHVDRDREKS 277
>gi|338762844|gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/327 (80%), Positives = 288/327 (88%), Gaps = 19/327 (5%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY+DA MRNQNAAVQARTKAQNRANV+QLKLIGQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDYSDALMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FA+PGD YAPPV+KAETPVERRARIHK+RLE+GA+KAAEE
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAETPVERRARIHKIRLEEGAKKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRV------------- 167
L+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YG IKRV
Sbjct: 121 LEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKRVGIKEHRECALVIG 180
Query: 168 ----RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 223
RLVTDK TNKPRGYAFIEY+HTRDMKAAYKQADG+K+D RRVLVDVERGRTVPNWR
Sbjct: 181 FWFVRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWR 240
Query: 224 PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRD 283
PRRLGGGLGTTRVGGEE+NQRYSGREQ G SRS EPR+R+DR DR+RE+SRER RD
Sbjct: 241 PRRLGGGLGTTRVGGEELNQRYSGREQVQPGGASRSEEPRMRDDR--DREREKSRERVRD 298
Query: 284 REREREKSLELSHDRPRDRDHRDDRHH 310
RERERE+S E S DR RDR+HR+DRHH
Sbjct: 299 RERERERSQERSQDRTRDREHREDRHH 325
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 280/476 (58%), Positives = 331/476 (69%), Gaps = 60/476 (12%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKRV LVTD+ TNKP+G
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGE 239
YAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTVPNWRPRRLGGGLGT+RV GGE
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240
Query: 240 EVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERSRERGRDREREREKSLELSHDR 298
E+ EQ+P S+S EP R RE +RE+SRE+G++RER R ELSH++
Sbjct: 241 EIVG-----EQQPQGRTSQSEEPSRPRE------EREKSREKGKERERSR----ELSHEQ 285
Query: 299 PRDRDH---RDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
PR+R R+D+HHRDRD+ R DRD R
Sbjct: 286 PRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRD------RRDRDRGRDRT 339
Query: 356 DKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQE 415
++ DRDR+R++ERD + + G SR+RD++Y GE E
Sbjct: 340 SRDHDRDRSRKKERDYEGGEYE-HEGGGRSRERDAEY-----------RGE-------PE 380
Query: 416 DDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKE 471
+ RG+Y+ + GD DRY+ RYD+MEEDD+RY+R S+ E
Sbjct: 381 ETRGYYEDDQ--------GDTDRYSH-------RYDKMEEDDFRYEREYKRSKRSE 421
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/488 (57%), Positives = 326/488 (66%), Gaps = 81/488 (16%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D FMRN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFMRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKRV LVTD+ TNKP+G
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGE 239
YAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTVPNWRPRRLGGGLGT+RV GGE
Sbjct: 181 YAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGE 240
Query: 240 EVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERSRERGRDREREREKSLELSHDR 298
E+ EQ+P S+S EP R RE +RE+SRE+G++RERER + LSH++
Sbjct: 241 EIVG-----EQQPQGRTSQSEEPSRPRE------EREKSREKGKERERERSRE--LSHEQ 287
Query: 299 PRDRDH---RDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
PR+R R+D+HHRDRD+ R DRDR R+ DR
Sbjct: 288 PRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDR 347
Query: 356 DKERDRDR------------TRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDR 403
D+ R +DR R RE+D +Y+ G+P+ GY +E D+
Sbjct: 348 DRSRKKDRDYEGGEYEHEGGGRSREKDAEYKRGEPEETHGY--------------YEEDQ 393
Query: 404 HGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRA 463
GD DRY+ RYD+MEEDD+RY+R
Sbjct: 394 ------------------------------GDTDRYSH-------RYDKMEEDDFRYERE 416
Query: 464 TSESRDKE 471
S+ E
Sbjct: 417 YKRSKRSE 424
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 323/454 (71%), Gaps = 16/454 (3%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY +A MRNQ+A VQ+R KAQ+RAN+LQLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGNAMMRNQDAGVQSRVKAQSRANLLQLKLIGQSHPTGLTTNLLKLFEPRPPLEHKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
P EKRK P +GM+QFVS FAEPGDP YAPPV ET E++ RI +L+LE+GA K AEE
Sbjct: 61 PLEKRKLPAYSGMSQFVSRFAEPGDPEYAPPVPTCETRAEKKDRIRQLKLEEGAAKVAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L+KYDP NDPNV+GDPYKTLFVARL YET+E K+KR+FE+YGPIKRVRLVTDK TNKPRG
Sbjct: 121 LQKYDPQNDPNVTGDPYKTLFVARLGYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAF+EY HTRDMK+AYKQADGRK+D +RVLVDVERGRTVPNWRPRRLGGGLG++R+GGE+
Sbjct: 181 YAFVEYAHTRDMKSAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGED 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
Q++S REQ+ + G RS EPR + DRDRE+SR+R EK+ E SHDR R
Sbjct: 241 AAQKHSAREQQNAAGRPRSEEPRRDDRSA-DRDREKSRDR-VRERDRDEKTRERSHDRAR 298
Query: 301 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD 360
DRD R+DRHH RDRDR +D RDR++DRD++R+
Sbjct: 299 DRDPREDRHHHRDRERTRDRDRERDQERDRGRDRRDRDRHKDH----GRDRDQDRDRKRE 354
Query: 361 RDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGW 420
R R R+RDRDYE ++D G RD DY R +HER D D + E
Sbjct: 355 RSHGRGRDRDRDYERASHEQDPG----RDRDYKRARHEHERGHLQASDADYGNGEPGYNQ 410
Query: 421 YDHHENYEHHRGYG--DHD---RYNQYHDDDNDR 449
++HH ++E + GYG HD R+ Y DD + +
Sbjct: 411 HEHHRSHEQY-GYGLDGHDRSKRHEHYRDDSHSK 443
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/434 (60%), Positives = 319/434 (73%), Gaps = 8/434 (1%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY +A MRNQ+A VQ+RTKAQ+RAN+LQLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGNAMMRNQDAGVQSRTKAQSRANLLQLKLIGQSHPTGLTTNLLKLFEPRPPLEHKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
P EKRK P TGMAQFVS FAEPGD YAPPV ET E++ RI +L+LE+GA K AEE
Sbjct: 61 PVEKRKLPAYTGMAQFVSRFAEPGDTEYAPPVPTCETRAEKKDRIRQLKLEQGAAKVAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L+KYDP NDPNV+GDPYKTLFVARL+YET+E K+KR+FE+YGPIKRVRLVTDK TNKPRG
Sbjct: 121 LQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRG 180
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAF+EY+HTRDMK+AYKQADGRK+D +RVLVDVERGRTVPNWRPRRLGGGLG++R+GGE+
Sbjct: 181 YAFVEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGED 240
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
+Q++S REQ+ + G RS E R+DR DRDRE+SRER E++ E SHDR R
Sbjct: 241 ASQKHSAREQQNAAGRPRSEE-PRRDDRPADRDREKSRER-VRERDRDERTRERSHDRTR 298
Query: 301 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD 360
DRD R+++HH RDRDR +D RDR++DRD++R+
Sbjct: 299 DRDPREEKHHHRDRERTRDRDRERDQERDRGRDRRDRDRHKDH----GRDRDQDRDRKRE 354
Query: 361 RDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGW 420
R R R+RDRDYE ++D +RDRD DY R +H+R E D D + +
Sbjct: 355 RSHGRGRDRDRDYEHVSHEQDP--ARDRDRDYKRARHEHDRGHFQESDADYGNGDPSYNQ 412
Query: 421 YDHHENYEHHRGYG 434
+ HE Y + +G+G
Sbjct: 413 HRSHEQYGYSQGHG 426
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/434 (58%), Positives = 300/434 (69%), Gaps = 13/434 (2%)
Query: 1 MGDYNDAFMR-NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGDY +A MR N + VQ R K RANV QLKL+GQ HPTGLT NLLKLFE R PLE+K
Sbjct: 1 MGDYGNAMMRGNPDGGVQGRPKGVARANVQQLKLMGQGHPTGLTPNLLKLFEARPPLEHK 60
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP EKRK P TGMAQFVS FAEPGD YAPPV ET E++ RI K +LE+GA K AE
Sbjct: 61 PPVEKRKLPAYTGMAQFVSRFAEPGDQEYAPPVPTCETRAEKKDRIQKFKLEQGAAKVAE 120
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
+L KYDP +DPN +GDPYKTLFVARL+YET+ES++KREFE+YGPIKRVRLVTDKETNKPR
Sbjct: 121 DLLKYDPQSDPNTTGDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPR 180
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
GYAFIEYMHTRDMK AYKQADGRK+D +RVLVDVERGRTVPNWRPRRLGGGLG++R+ G+
Sbjct: 181 GYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRISGQ 240
Query: 240 EVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRP 299
+Q+ S REQ PS G RS EP+ + R DRDRE+SRER EK E SHDR
Sbjct: 241 NADQKPSAREQ-PSAGRPRSEEPKRDDRRV-DRDREKSRER-VRERDRDEKPRERSHDRT 297
Query: 300 RDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER 359
R+RD R++RHH + RDR RDR R + DREKDR +
Sbjct: 298 RERDPREERHHHRDRDRTRDRDRGRDREKDHGRDRDRRDRDRDRDRGRDHDREKDRGRSH 357
Query: 360 DRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRG 419
DR R R R+R+RD+E +R+R + +RD+DY + KH+R +D D G
Sbjct: 358 DRHRERGRDRERDHERPSHERERSHLHERDADYANGEPKHDRKL--------SDYGQDYG 409
Query: 420 WYDHHENYEHHRGY 433
Y+ HE + H Y
Sbjct: 410 -YNQHEQHRSHEAY 422
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/264 (71%), Positives = 215/264 (81%), Gaps = 4/264 (1%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKRVRLVTDKETNKP
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKP 179
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
RGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG++R+GG
Sbjct: 180 RGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGG 239
Query: 239 EEVNQRYSGREQEPSRGPSRSAEP 262
E Q+ S R+Q+ + G RS EP
Sbjct: 240 ENAEQKLSTRDQQHA-GRPRSEEP 262
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/264 (71%), Positives = 215/264 (81%), Gaps = 4/264 (1%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKRVRLVTDKETNKP
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKP 179
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
RGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG++R+GG
Sbjct: 180 RGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGG 239
Query: 239 EEVNQRYSGREQEPSRGPSRSAEP 262
E Q+ S R+Q+ + G RS EP
Sbjct: 240 ENAEQKLSTRDQQHA-GRPRSEEP 262
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/285 (68%), Positives = 228/285 (80%), Gaps = 3/285 (1%)
Query: 1 MGDYNDAFMR-NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGD+ +A R N + +Q R K RANV QLKL+GQ HPTGLT NLLKLFE R LE+K
Sbjct: 1 MGDHGNAMTRGNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHK 60
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP +KRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI KL+LE+GA+K A+
Sbjct: 61 PPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAK 120
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
EL+ Y+P +DPN + DPYKTLFVARL+YET+ES++KREFE+YGPIKRVRLVTDK+TNKPR
Sbjct: 121 ELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKDTNKPR 180
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
GYAFIEYMHTRDMK AYKQADGRK+D +RVLVDVERGRTVPNWRPRRLGGGLG++R+ G
Sbjct: 181 GYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRICGA 240
Query: 240 EVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDR 284
+Q+ RE PS G RS EP+ R D DRDRE+SRER R+R
Sbjct: 241 SADQKPPAREA-PSVGRPRSEEPK-RGDSRVDRDREKSRERVRER 283
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/277 (68%), Positives = 215/277 (77%), Gaps = 17/277 (6%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR------------ 166
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRL 179
Query: 167 -VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 225
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPR
Sbjct: 180 LVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPR 239
Query: 226 RLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 262
RLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 240 RLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 275
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/277 (68%), Positives = 215/277 (77%), Gaps = 17/277 (6%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR------------ 166
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRL 179
Query: 167 -VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 225
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPR
Sbjct: 180 LVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPR 239
Query: 226 RLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 262
RLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 240 RLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 275
>gi|14028993|gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 491
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/292 (64%), Positives = 215/292 (73%), Gaps = 32/292 (10%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR------------ 166
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRQTSLKNVGDGTT 179
Query: 167 ----------------VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVL
Sbjct: 180 YLQAWGFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVL 239
Query: 211 VDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 262
VDVERGRTVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 240 VDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 290
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/264 (70%), Positives = 213/264 (80%), Gaps = 5/264 (1%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVSHFAEP DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKRVRLVT+K+T+KP
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKP 178
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
RGYAFIEY+HTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG++R+GG
Sbjct: 179 RGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRMGG 238
Query: 239 EEVNQRYSGREQEPSRGPSRSAEP 262
+ +++ S REQ+ G RS EP
Sbjct: 239 TDTDKKDSTREQQQG-GRPRSEEP 261
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/264 (70%), Positives = 211/264 (79%), Gaps = 5/264 (1%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVSHFAEP DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKRVRLVT+K+T+KP
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKP 178
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
RGYAFIEY+HTRDMK AY ADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG+TR+GG
Sbjct: 179 RGYAFIEYVHTRDMKNAYPAADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRMGG 238
Query: 239 EEVNQRYSGREQEPSRGPSRSAEP 262
+ +++ S REQ+ G RS EP
Sbjct: 239 TDTDKKDSTREQQQG-GRPRSEEP 261
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/264 (70%), Positives = 212/264 (80%), Gaps = 5/264 (1%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQ+VSHFA P DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQYVSHFATPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKRVRLVT+K+T+KP
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKP 178
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 238
RGYAFIEY+HTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG++R+GG
Sbjct: 179 RGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRMGG 238
Query: 239 EEVNQRYSGREQEPSRGPSRSAEP 262
+ +++ S REQ+ G RS EP
Sbjct: 239 ADTDKKDSTREQQHG-GRPRSEEP 261
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/263 (68%), Positives = 211/263 (80%), Gaps = 3/263 (1%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQN-RANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGDY + + +RT+ Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEYK
Sbjct: 1 MGDYGHGGGQMRGNP-DSRTRGQGQRTNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEYK 59
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP EKRK P TGMAQFVSHFA+ DP YAPPV K ET E++ARI +LE+GA K AE
Sbjct: 60 PPLEKRKLPAYTGMAQFVSHFAKSEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKIAE 119
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
EL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIK VRLVT+K+T+KPR
Sbjct: 120 ELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKWVRLVTEKDTSKPR 179
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
GYAFIEY+HTRDMK+AYKQADGRK+D +RVLVDVERGRTVPNWRPRRLGGGLG++R+GG
Sbjct: 180 GYAFIEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRMGGA 239
Query: 240 EVNQRYSGREQEPSRGPSRSAEP 262
+ +++ S R Q+ G RS EP
Sbjct: 240 DADKKDSTRGQQHG-GRPRSEEP 261
>gi|224094751|ref|XP_002310221.1| predicted protein [Populus trichocarpa]
gi|222853124|gb|EEE90671.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/170 (85%), Positives = 155/170 (91%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRN NAAV+ K QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDAFMRNPNAAVRGSAKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP GMAQFVSHFAEPGDP YAPP+++AETP ER+ARIH RLEKGAEKAAEE
Sbjct: 61 PPEKRKCPPYLGMAQFVSHFAEPGDPEYAPPIKEAETPAERKARIHAARLEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLV 170
L+KYDP NDPNVSGDPYKTLFVARLSYETTES+IKREFESYGPIKRV +
Sbjct: 121 LQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREFESYGPIKRVGIF 170
>gi|30693345|ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|1354466|gb|AAD12776.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|1354468|gb|AAD12774.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|332645172|gb|AEE78693.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 204
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 149/167 (89%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRV 167
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKRV
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167
>gi|168015720|ref|XP_001760398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688412|gb|EDQ74789.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 150/189 (79%), Gaps = 9/189 (4%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY DA+MR + RTKAQNRA V QLKLIGQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDYGDAYMRKDASGPPGRTKAQNRATVQQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP G+ QFV HFAEPGDP YAPPV K ETP +RRARIH+LRLE+GA+KA +E
Sbjct: 61 PPEKRKCPPYLGIGQFVQHFAEPGDPEYAPPVTKGETPTQRRARIHQLRLEEGAKKAVDE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L KYDP NDP++ GDPYKTLFVAR+SYETTE+KI+REFESYGPIKRV +N R
Sbjct: 121 LSKYDPTNDPDIEGDPYKTLFVARISYETTENKIRREFESYGPIKRV-------SN--RL 171
Query: 181 YAFIEYMHT 189
F+ MH
Sbjct: 172 LLFVTLMHI 180
>gi|118488424|gb|ABK96027.1| unknown [Populus trichocarpa]
Length = 313
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 230/330 (69%), Gaps = 51/330 (15%)
Query: 169 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+V DK +NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG
Sbjct: 1 MVADKVSNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 60
Query: 229 GGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDR--ER 286
GGLGTTRVGGEEVNQR+ GRE + S G SRS EPR REDRH +R+RE SR+RGRDR ER
Sbjct: 61 GGLGTTRVGGEEVNQRHPGREVQQSGGLSRSEEPRTREDRHTEREREVSRDRGRDRDKER 120
Query: 287 EREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRD 346
EREKS E SHDRPRDRDHR+DRH+RDR+R RDR R+RDR R+R RDR
Sbjct: 121 EREKSHERSHDRPRDRDHREDRHNRDRERERDRGRDRDRTRDRGRDRG------------ 168
Query: 347 HERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGE 406
R+ +RD+ERD R R R+R+RDYEVGD R + RD +SKHERDRHGE
Sbjct: 169 ----RDYERDRERDHGRDRARDRERDYEVGDHYHGRSHDRD--------ESKHERDRHGE 216
Query: 407 RDYDPTDQEDDRGWYD---------------HHENYEHHRG---------YGDHDRYNQY 442
RD D + EDD GWY+ H+++YEH R GDH R + Y
Sbjct: 217 RDNDHAEPEDDMGWYEQPEQGQKLPDAEDDQHYDHYEHRRSRGRYDHMDVQGDHGRSDLY 276
Query: 443 HDDDNDRYDQMEEDDYRYDRATSESRDKER 472
H D D D MEEDDY YDR TSESR+ R
Sbjct: 277 HGTDRD-GDHMEEDDYHYDRGTSESRENRR 305
>gi|168061033|ref|XP_001782496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666049|gb|EDQ52715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 141/169 (83%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY DA+MR + RTK QNRA V QLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGDAYMRKDASGPPGRTKTQNRATVQQLKLIGQSHPTGLTTNLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP G+ QFV HFAEPGDP YAPPV K ETP +RRARIH+LRLE+GA+KA +E
Sbjct: 61 PPEKRKCPPYQGIGQFVQHFAEPGDPEYAPPVTKGETPTQRRARIHQLRLEEGAKKALDE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRL 169
L KYDP NDP++ GDPYKTLFVAR+SYETTE KI+REFESYGPIKRV
Sbjct: 121 LSKYDPTNDPDIEGDPYKTLFVARISYETTEHKIRREFESYGPIKRVSC 169
>gi|302798547|ref|XP_002981033.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
gi|300151087|gb|EFJ17734.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
Length = 156
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 133/155 (85%), Gaps = 1/155 (0%)
Query: 14 AAVQARTKA-QNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTG 72
A + AR KA QNRA V QLKLIGQSHPTGLTANLLKLFEPR PLEYKPPPEKR PP G
Sbjct: 1 AGMPARPKAAQNRATVQQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRNLPPYHG 60
Query: 73 MAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV 132
++QFV HFAEPGDP Y+PP+ KAETP +RRARIH +RLEKGAEKA E+L+KYDP D N+
Sbjct: 61 ISQFVQHFAEPGDPEYSPPIVKAETPSQRRARIHSVRLEKGAEKATEDLEKYDPQTDSNI 120
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPIKRV 167
GDPYKTLFVAR+SYETTE KIKREFE+YGPIKRV
Sbjct: 121 EGDPYKTLFVARISYETTEHKIKREFEAYGPIKRV 155
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 150/197 (76%), Gaps = 7/197 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE---KAETP 98
LT NLL+LF+P P+EYK P EK++ PP TG+AQFVS F L E K ET
Sbjct: 1 LTPNLLRLFDPPPPVEYKEPIEKKELPPYTGIAQFVSCFEN----LSIDDQESQAKVETT 56
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ERRAR++ RLEKG EK AEE+ KYDP +DPN GDPYKTLF+ +LSY+TTE +++REF
Sbjct: 57 AERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSYDTTEHRLQREF 116
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
E YGP+KRVRLV DK T+KPRGYAF+E+ H++DMK AYK ADG K+D RR+LVDVERGRT
Sbjct: 117 ERYGPVKRVRLVHDKHTDKPRGYAFVEFYHSQDMKNAYKHADGTKIDNRRILVDVERGRT 176
Query: 219 VPNWRPRRLGGGLGTTR 235
V +W P+RLGGGLG R
Sbjct: 177 VKDWLPKRLGGGLGNAR 193
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 167/321 (52%), Positives = 203/321 (63%), Gaps = 36/321 (11%)
Query: 107 KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR 166
KLRLEKG EKAAE+LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR
Sbjct: 1 KLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR 60
Query: 167 VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 226
V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQAD ++L + ER P RPRR
Sbjct: 61 VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADDKRLTAEEFWLMWER-ENRPKLRPRR 119
Query: 227 LGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERSRERGRDR 284
LGG LGT+RV GGEE+ EQ+P S+S EP R RE +RE+SRE+G++R
Sbjct: 120 LGGELGTSRVGGGEEI-----AGEQQPQGRTSQSEEPSRPRE------EREKSREKGKER 168
Query: 285 EREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 341
ER R ELSH++PR+R R+D+HHRDRD+ R DRDR
Sbjct: 169 ERSR----ELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRD 224
Query: 342 DRGRDHERDREKDRDKERDRDR------------TRERERDRDYEVGDPDRDRGYSRDRD 389
R+ DRD+ R +DR R RERD +Y G+P+ RGY D
Sbjct: 225 RDRGRDRTSRDHDRDRSRKKDRDYEGGEYEHEGGGRSRERDAEYR-GEPEETRGYYEDDQ 283
Query: 390 SDYDRIDSKHERDRHGERDYD 410
D DR H D+ E D++
Sbjct: 284 GDTDRYS--HRYDKMEEDDFE 302
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 150/213 (70%), Gaps = 3/213 (1%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
L NLL +F R PLEY P K + P +G+A F S F+ P PP K E+ +
Sbjct: 5 LPPNLLLMFVARPPLEYIAPIPKPQLPNYSGLAAFKSSFSADPPP---PPATKIESRDQI 61
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
+ R + ++++ EK + LK++DPH++ +GDPYKTLFV+R+SY+T+ESK+K EF Y
Sbjct: 62 KQRKIEQKVQQNTEKNLKSLKQWDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQY 121
Query: 162 GPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 221
GPIK++RLVTD+ T KP+GYAFIE+ RDMK AYKQADG+K+D RRVLVD+ERGR + N
Sbjct: 122 GPIKKIRLVTDQVTGKPKGYAFIEFEKERDMKIAYKQADGQKIDDRRVLVDIERGRVIKN 181
Query: 222 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSR 254
W+PR+ GGGLG TR GG +VNQ +SGRE R
Sbjct: 182 WKPRKYGGGLGNTRAGGADVNQTFSGREMSEQR 214
>gi|87130531|gb|ABD23909.1| U1 small nuclear ribonucleoprotein 70K splice variant 1 [Oryza
sativa Japonica Group]
gi|87130533|gb|ABD23910.1| U1 small nuclear ribonucleoprotein 70K splice variant 2 [Oryza
sativa Japonica Group]
Length = 220
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/169 (67%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRV 167
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKRV
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRV 168
>gi|162458369|ref|NP_001105268.1| U1 snRNP [Zea mays]
gi|49343280|gb|AAT64947.1| U1 snRNP [Zea mays]
gi|49343293|gb|AAT64948.1| U1 snRNP [Zea mays]
gi|413934406|gb|AFW68957.1| U1 snRNP isoform 1 [Zea mays]
gi|413934407|gb|AFW68958.1| U1 snRNP isoform 2 [Zea mays]
Length = 193
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/173 (68%), Positives = 131/173 (75%), Gaps = 4/173 (2%)
Query: 1 MGDYN--DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVSHFAEP DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVT 171
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKRV V
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVSNVV 171
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 150/216 (69%), Gaps = 10/216 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK------RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L NLL LF PR + YK P + R+ P TG+ F F +P D PP +
Sbjct: 5 LPPNLLALFAPRDAIPYKAPLQPLTWEKDRERAPYTGLGNFSHLFEDPKD---TPPPTRG 61
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
ET E++ R K +LEK AE+ EE+K +DPHNDPN GD +KTLFV+R++Y+TTESK++
Sbjct: 62 ETKEEKKTRKIKEKLEKRAEEIEEEIKGWDPHNDPNAGGDAFKTLFVSRINYDTTESKLR 121
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
REFE+YG I++V +V D T KPRGYAF+E+ RDM AYK ADG+K+DGRRVLVDVER
Sbjct: 122 REFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKSADGKKIDGRRVLVDVER 181
Query: 216 GRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 251
GRTV WRPRR GGGLG+TR G ++ N+R S RE+E
Sbjct: 182 GRTVKGWRPRRFGGGLGSTRAGPDDSNRR-SEREKE 216
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 145/212 (68%), Gaps = 6/212 (2%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L NLL LF R P+ + P P+ + P TG+AQ+V F +P + P K ET
Sbjct: 10 LPPNLLALFAARDPIPFAIPIERPKHHRPLPYTGIAQYVKLFEDPSETPIPP---KVETR 66
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
E+R R K + E+ A K ++L ++P+ P+ + DPYKTLFVAR++Y+TTE+KI+REF
Sbjct: 67 EEKRERKRKEKAEQIAYKVEQDLALWNPNEIPSGTKDPYKTLFVARINYDTTENKIRREF 126
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
E YGPIK +R+V + NKPRGY FIEY H RDM AAYK ADG+K+DG RVLVDVER RT
Sbjct: 127 EGYGPIKTIRMVKNAMNNKPRGYCFIEYEHERDMHAAYKNADGKKIDGHRVLVDVERART 186
Query: 219 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
V NWRPRRLGGGLG TR G E N +Y+ RE+
Sbjct: 187 VRNWRPRRLGGGLGNTRRGPPEQNSKYTTREE 218
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 153/245 (62%), Gaps = 34/245 (13%)
Query: 11 NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCP-P 69
N+ AAV+A ++ + H TGL LL LF PRA L +K K P
Sbjct: 13 NRQAAVKALKES-----------VQTGHKTGLPPQLLSLFNPRAQLPLVTDVKKPKIKLP 61
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEK---------------------AETPVERRARIHKL 108
TG+A +V FA GDP Y PP + ET +E++ R+ K
Sbjct: 62 YTGLAAYVKEFAGEGDPDYQPPRNEDRPPSPRLFRNRELAAQARVDTETKIEKKIRLTKW 121
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVR 168
+LE+ +A E+ K +DP+ DP + GDPYKT+ VARLSY+ T+ K++REFE +GPIKRVR
Sbjct: 122 KLEEAEREAREKSKTFDPNKDPKIEGDPYKTIIVARLSYDVTDKKLRREFEEFGPIKRVR 181
Query: 169 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+VTDK+ KPRGYAFIE+ H DMK AYK ADG+K++GRRVLVDVERGRTV NW+PRRLG
Sbjct: 182 IVTDKQ-GKPRGYAFIEFEHKADMKEAYKAADGKKIEGRRVLVDVERGRTVENWKPRRLG 240
Query: 229 GGLGT 233
GGLG
Sbjct: 241 GGLGA 245
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 147/215 (68%), Gaps = 2/215 (0%)
Query: 38 HPTGLTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
H TGLT +LL LF PR P+EY P P K +K P+TG+A +V F +P D P EK E
Sbjct: 92 HQTGLTPSLLALFVPRPPVEYMPAPAKPKKTQPMTGVAAYVDKFTDPADDPPPAPKEKKE 151
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIK 155
T E++ R E+ A E ++K+DP DP DPYKTLFV RLSY+ ESK++
Sbjct: 152 TKEEKKLRRRMAAEERNARALEEAIEKWDPKEDPKAKDSDPYKTLFVGRLSYDVDESKLR 211
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
REFE +GP+K VR+V D ET KPRGYAFIEY DMK AYKQADGR+++ +RV+VD ER
Sbjct: 212 REFEQWGPVKSVRVVEDVETGKPRGYAFIEYNRESDMKTAYKQADGRRIENKRVVVDAER 271
Query: 216 GRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
GRTVP+W+PRRLGGGLG TR G + N SGR+Q
Sbjct: 272 GRTVPDWKPRRLGGGLGRTRKGAKHENSLVSGRDQ 306
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 150/252 (59%), Gaps = 33/252 (13%)
Query: 9 MRNQNAAVQARTKAQNRANVL-QLKLIGQSHPTGLTANLLKLFEPRAP------LEYKPP 61
M ++ A+ Q N+ +LK H TGL LL+LFEP P + +PP
Sbjct: 1 MDSKAASAQGNPALANKLEAERKLKEGISGHKTGLPKKLLELFEPLPPPARLTDIPKRPP 60
Query: 62 PEKRKCPPLTGMAQFVSHFAEPGDP---------------------LYAPPVEKAETPVE 100
K P L G+AQ V+ FAEPGD + A ET E
Sbjct: 61 ----KLPYL-GIAQHVALFAEPGDEEYEPPPEVPRPPSPRRFRNPEMTAQARVDYETKAE 115
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
++ R+ ++ E E LK +DP DP GDP+KTLFVAR+SY+ TE K+KREFE
Sbjct: 116 KKTRVSTQKIAGAKESIEEGLKIWDPAKDPLAEGDPFKTLFVARVSYDATEKKLKREFEE 175
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 220
YGP+KRVRLVT K++ KPRGYAF+E+ H DMK AYK ADGRK++GRRV+VDVERGRTVP
Sbjct: 176 YGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMADGRKIEGRRVVVDVERGRTVP 235
Query: 221 NWRPRRLGGGLG 232
NWRPRRLGGG G
Sbjct: 236 NWRPRRLGGGKG 247
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 144/210 (68%), Gaps = 8/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-EKAETPVE 100
L ++ LFE APL + P KRK PP +G++ F+S F + DP PP +ETP E
Sbjct: 25 LPMHIRALFEANAPLTHLPQLTKRKMPPYSGISDFISQFEQ--DP---PPQRLLSETPKE 79
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPH-NDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
R+ R+ ++ K EK +E+ K+DP D + D YKTLFV R+SYETTE +++ EFE
Sbjct: 80 RKERLRAEQIAKHQEKLKQEIAKWDPAVQDDRKTEDAYKTLFVGRISYETTEKQLRHEFE 139
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
+G IK +RLV + E K RGYAFIEY H D+KAAYK ADG+K+DGRRV+VDVERGRTV
Sbjct: 140 QFGAIKHIRLV-EGEEGKSRGYAFIEYEHEADLKAAYKFADGKKIDGRRVVVDVERGRTV 198
Query: 220 PNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
WRPR+ GGG+G TR GG +VN +YSGRE
Sbjct: 199 HEWRPRKFGGGIGETRKGGPDVNVKYSGRE 228
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 169/301 (56%), Gaps = 48/301 (15%)
Query: 11 NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKC-PP 69
N+ AAV+A ++ + H TGL LL LF PR L +K K
Sbjct: 13 NRQAAVKALKES-----------VQTGHKTGLPPPLLTLFSPRQQLPLADGLKKAKINQK 61
Query: 70 LTGMAQFVSHFAEPGDPLYAPP----------------------VEKAETPVERRARIHK 107
TGMA +V FA GDP Y PP VE ET E++ R+ K
Sbjct: 62 YTGMASYVKEFASEGDPEYQPPRNPDCPPSPRLFRNPELRIQSRVE-TETKTEKKIRLTK 120
Query: 108 LRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRV 167
+LE+ +A E K +DP+ DP + GDPYKT+ VARLS++ TE K++REFE YGP+KRV
Sbjct: 121 WKLEEAEREAKERAKTFDPNKDPKIEGDPYKTILVARLSFDVTEKKLRREFEEYGPVKRV 180
Query: 168 RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
RLV DK K RGYAF+EY H DMK AYK ADG+K++GRRVLVDVERGRTV NW+PRRL
Sbjct: 181 RLVMDK-NGKSRGYAFVEYEHKADMKEAYKAADGKKIEGRRVLVDVERGRTVENWKPRRL 239
Query: 228 GGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERE 287
GGGLG G E + R++ + P+ A P + DR R+RE RDR
Sbjct: 240 GGGLGAP---GRE--PKAPKRQKPGALLPTPIAAPPV-------DDRPRAREYDRDRSEP 287
Query: 288 R 288
R
Sbjct: 288 R 288
>gi|410905871|ref|XP_003966415.1| PREDICTED: uncharacterized protein LOC101066791 [Takifugu rubripes]
Length = 467
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TRDERLERKRREKIERRQTVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYSKRTAKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN ++SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIKHSGR 213
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
DP PP + ET ER R K + E+ A++ EE +DP+ +P GD +KTLFVAR
Sbjct: 1 DPKDTPPPTRVETKEERLERKRKEKNEEIAQRIQEECGSWDPNANPRF-GDAFKTLFVAR 59
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKL 204
++Y+T+ESK++REFESYGPI +R+V ET KPRGYAFIEY H RDM +AYK ADG+K+
Sbjct: 60 INYDTSESKLRREFESYGPINSIRMVQSVETGKPRGYAFIEYEHERDMHSAYKYADGKKI 119
Query: 205 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
DGRRVLVDVER RTV W PRRLGGGLG+TR GG +VN R+SGRE
Sbjct: 120 DGRRVLVDVERARTVKGWLPRRLGGGLGSTRKGGADVNIRHSGRE 164
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
L +L +F+PR PL +KPP KR P +TG+ ++ F + + PP+ ETP +R
Sbjct: 24 LPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYKDVF----EKIPPPPIIPYETPKQR 79
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
AR+ + ++ + K E+KK++P DPN +GD YKTLFVA +SY+T+E K++REFE Y
Sbjct: 80 HARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQY 139
Query: 162 GPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 221
G IK++RLV D E ++PRGYAFIEY DM AYK+ADGRK+D RR+LVDVERGRTV N
Sbjct: 140 GQIKKIRLVNDLE-DQPRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDVERGRTVRN 198
Query: 222 WRPRRLGGGLGTTR 235
WRPRR GGGLG +R
Sbjct: 199 WRPRRFGGGLGESR 212
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 147/239 (61%), Gaps = 19/239 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP K +K P +G+A+F+ F P D PP K ET
Sbjct: 5 LPPNLLALFAPRDPLPYLPPIAKLSFEKKRAPYSGVAKFIHEFENPND---TPPPVKVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E K + + ++P + S DP+KTLFVARLSY+TTE+K++RE
Sbjct: 62 REERIERKRRERAELQNYKIEQGIATWNPSANDKASTDPFKTLFVARLSYDTTETKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ ++TD T K RGYAFIEY H DM AAYK ADG+K+D RRVLVDVERGR
Sbjct: 122 FEVYGPIKKIYMITDIITGKSRGYAFIEYEHEADMHAAYKHADGKKIDKRRVLVDVERGR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER 276
TV NW PRRLGGGLG TR R++ P+ S + R+ GDR R+R
Sbjct: 182 TVKNWLPRRLGGGLGNTR------------RDRPPAGSISHDDDDRMMYSSSGDRYRDR 228
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 153/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKIERRQGEVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYNKGTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV W PRRLGGGLG TR GG +VN ++SGR+
Sbjct: 182 RTVKGWLPRRLGGGLGGTRRGGADVNIKHSGRD 214
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 145/239 (60%), Gaps = 34/239 (14%)
Query: 71 TGMAQFVSHFAEPGDP---------------LYAPPVEKA------ETPVERRARIHKLR 109
TG+AQ+VSHF E GDP ++ P E+ VE+ R+ + R
Sbjct: 33 TGIAQYVSHFVERGDPEYEPPPPETQPPPPRIFRNPEMPTQARVDIESKVEKDIRVRQER 92
Query: 110 LEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRL 169
++ A + E LK +DP DPNV GDP+KTLFV+RLSY+ TE K+KREFE YGPIKR+RL
Sbjct: 93 QQRAARQREENLKSWDPSKDPNVEGDPFKTLFVSRLSYDVTERKLKREFEEYGPIKRIRL 152
Query: 170 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 229
V +K + KPRGYAFIEY H DMK AYK ADGRK++ RRVLVDVERGRTVP+WRPRR GG
Sbjct: 153 VHNKNSGKPRGYAFIEYEHKNDMKQAYKMADGRKIEDRRVLVDVERGRTVPHWRPRRFGG 212
Query: 230 GLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERER 288
G G+ R R P + R R+ E ++ ER + G R+RER
Sbjct: 213 GKGS--------ESRMVSR---PPKDLKRQFVARLVERAMAEK--ERRSDTGDRRKRER 258
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 156/254 (61%), Gaps = 28/254 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRL-------GGGLGT------TRVGGEEVNQRYSGREQEPSRG----PSRS 259
RTV WRPRRL G LG +G + +++ P+RG P S
Sbjct: 182 RTVKGWRPRRLVLVESLCFGVLGAKWLGVGPGLGAVVLPSKHACEGPTPARGAPHFPCLS 241
Query: 260 AEPRIREDRHGDRD 273
A+ I RH RD
Sbjct: 242 ADVNI---RHSGRD 252
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 153/212 (72%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKIERRQAVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K+T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN ++SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIKHSGR 213
>gi|108742141|gb|AAI17603.1| Snrnp70 protein [Danio rerio]
Length = 339
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 140/217 (64%), Gaps = 11/217 (5%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K+T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 253
RTV WRP L +G GEE S E +
Sbjct: 182 RTVKGWRPGDL---VGVLVAQGEEAQMSTSSTLAETT 215
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 146/211 (69%), Gaps = 7/211 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP PE+++ +G++ +V F +P D PP + ET
Sbjct: 5 LPPNLLALFAPREPIRYLPPLDKLPEEKRTDGYSGISSYVQLFEDPAD---TPPPARGET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R R K + E +K E++++D H++ + + + +KTLF+AR++Y+TTESK++RE
Sbjct: 62 REEKRLRKMKEKEEMCKQKLENEVEEWDAHSNASATSNAFKTLFIARVNYDTTESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FESYGPIK + + D T KP+GYAFIEY H RDM +AYK ADG+K+D RRVLVDVER R
Sbjct: 122 FESYGPIKMISIAHDINTGKPKGYAFIEYAHERDMHSAYKYADGKKIDSRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
TV W PRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 TVKGWTPRRLGGGLGGTRRGGPDVNSRHSGR 212
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 149/241 (61%), Gaps = 25/241 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC---PPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L NLL LF PR P+ + PP EK K P TG+AQF+ F +P + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHKHHRKLPYTGVAQFLGEFEDPSE---TPAPARIETR 61
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ER+ R + + E+ K ++L ++P +PN +G+PY TLFVARL+Y+T+E K++REF
Sbjct: 62 EERKERKRREKQEQANYKLEQDLALWNPKKNPNATGNPYNTLFVARLNYDTSEHKLRREF 121
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
+ YGPIKR+ ++ D T KPRGYAFIE+ H RDM AA K A+ RK+DG R+L D+ERGRT
Sbjct: 122 DVYGPIKRISMIKDIATGKPRGYAFIEFEHERDMHAANKDANNRKIDGHRILTDIERGRT 181
Query: 219 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSR 278
P+WRPRRLG GLG +R GPS S+ P IR+DR G R R
Sbjct: 182 RPDWRPRRLGKGLGKSR------------------SGPSDSSRP-IRDDRDGFGSRGSGR 222
Query: 279 E 279
+
Sbjct: 223 D 223
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 151/263 (57%), Gaps = 45/263 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER 276
RTV WRPRRL G + G +VN R+SGR
Sbjct: 182 RTVKGWRPRRLEPGAPGLKSGHADVNIRHSGR---------------------------- 213
Query: 277 SRERGRD---REREREKSLELSH 296
D R ER L H
Sbjct: 214 ------DDTSRYDERPGPSPLPH 230
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|355756025|gb|EHH59772.1| hypothetical protein EGM_09962 [Macaca fascicularis]
Length = 255
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 34 IGQSHPT--GLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFV-----SHFAEPGDP 86
+G+ P + + +FEP PLE+K KRK P + G+A + ++ E G P
Sbjct: 13 MGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVP 72
Query: 87 LYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLS 146
PP EK ETP ++ ARI + + E +++ K++P +DP GD YKTLF+A++S
Sbjct: 73 ---PPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKIS 129
Query: 147 YETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDG 206
Y+TTE K++REFE +G I+ +R+V D E KPRGYAF+EY + DM+ AYK+ DGRK+DG
Sbjct: 130 YDTTEKKLRREFEQFGRIQSIRMVQD-EDGKPRGYAFVEYENEDDMRVAYKRGDGRKIDG 188
Query: 207 RRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RRVLVDVERGRTV NW PRR GGGLG +R
Sbjct: 189 RRVLVDVERGRTVRNWLPRRFGGGLGDSR 217
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K+T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN ++SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRD 214
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 152/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P +G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYSGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVESELKMWDPHNDTNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYMVYNKHSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 142 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAXYIREFEDPRD---APPPTRAE 198
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 199 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 258
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 259 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 318
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 319 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 350
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|297277576|ref|XP_002801385.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Macaca mulatta]
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen [Homo sapiens]
gi|119572835|gb|EAW52450.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_e [Homo sapiens]
gi|380815838|gb|AFE79793.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384948960|gb|AFI38085.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 151/212 (71%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 182 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 238
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 239 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 298
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 299 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 358
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 359 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 390
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 151/213 (70%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRRKKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHTVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|119572837|gb|EAW52452.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_g [Homo sapiens]
Length = 395
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 153/215 (71%), Gaps = 12/215 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP E K P P G+A ++ F +P D APP +
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLE--KLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+REFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVE
Sbjct: 120 RREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 179
Query: 215 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 180 RGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 152/213 (71%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K+T +PRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIYIVYNKKTGRPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN ++SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRD 214
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 150/212 (70%), Gaps = 8/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 151/213 (70%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDSNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 206/348 (59%), Gaps = 28/348 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP K +K +G+ F+ F +P D PP ET
Sbjct: 5 LPHNLLTLFAPRDPIPYLPPVSKLSHEKKNRGYSGVGSFMDLFEDPKD---TPPPTTIET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++ R + + E+ A K +E+ ++PH+D N DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 KEDKLERRRREKAEQVAYKLEQEIAAWNPHSDANAVTDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YG IK++ + +K KPRGYAFIEY + RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FELYGLIKKIVVTRNKIDGKPRGYAFIEYENERDMYSAYKYADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER- 276
TV W PRRLGGGLG TR GG EVN +SGRE + + I R +R+RER
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPEVNLIHSGREDNERERERYARKMLISYSRTTERNRERD 241
Query: 277 ------------SRERGRDRERE----REKSLELSHDRPRDRDHRDDRHHRDRDR--TRD 318
R R RD ER+ + S +L R RDR RD + + ++
Sbjct: 242 YYDRDGDREREPRRPRSRDHERKHHCSKSGSRKLHICRSRDRGPRDVEYDEVEEVLGSKP 301
Query: 319 RERERDRGRERDRDRTRDRDRGRDRG-RDH-ERDREKDRDKERDRDRT 364
R+++ DR R+R R +RD +R ++R RDH RD+ KDR ++ D++ +
Sbjct: 302 RDKDPDRKRKRKRSHSRDCERRKNRKERDHYRRDKSKDRCEKYDKNNS 349
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 130/196 (66%), Gaps = 5/196 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PL+ P +K+ G+A +V+ F E G P PP ETP
Sbjct: 4 IGMPPHILALFQARPPLDPFPAFKKKHTRGYVGLADYVNKF-ESGPP---PPTVPYETPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R R + RL K E +K+Y+P D ++GDP++TLFV +SY+TTE K+KREFE
Sbjct: 60 QRLLRQKRARLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVGGISYDTTEKKLKREFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
YG IKRVRL+ D+ KPRGY FIE+ + RDMK AYK ADG+K+DGRRVLVDVER RTV
Sbjct: 120 QYGSIKRVRLIYDRN-GKPRGYGFIEFENDRDMKEAYKNADGKKIDGRRVLVDVERARTV 178
Query: 220 PNWRPRRLGGGLGTTR 235
P W PRRLGGG G R
Sbjct: 179 PGWLPRRLGGGRGKPR 194
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 131/196 (66%), Gaps = 5/196 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PLE P +K+ G+A +V+ F E G P PP ETP
Sbjct: 4 IGMPPHILALFQARPPLEPFPAFKKKHTRGYVGLADYVNKF-ESGPP---PPTVPYETPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R R + RL K E +K+Y+P D ++GDP++TLFVA +SY+TTE K+KREF+
Sbjct: 60 QRLLRQKRERLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVAGISYDTTEKKLKREFD 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
YG IKRVRL+ D+ KPRGY FIE+ + RDMK AYK ADG+K+DGRRVLVDVER RTV
Sbjct: 120 QYGSIKRVRLIYDRN-GKPRGYGFIEFENDRDMKEAYKNADGKKIDGRRVLVDVERARTV 178
Query: 220 PNWRPRRLGGGLGTTR 235
P W PRRLGGG G R
Sbjct: 179 PGWLPRRLGGGRGKPR 194
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 157/260 (60%), Gaps = 20/260 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP E K P+TG+AQ+++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPIQYLPPVEDLLVDKNAKRAPMTGVAQYINLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
A+ E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AQAKEEKRRQKEELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+REFE+YG IK++ +V D E KPRGYAFIEY +M AYK+ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 215 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDR 274
RGRT W PRRLGGG G TR E + E+E G E R RE R G RDR
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTRKTRE---SKAVIEEKEMQSGFGGGYEDRERE-RSGSRDR 235
Query: 275 ERSRER---GRDREREREKS 291
+ R G DR+R RE S
Sbjct: 236 RQDSYRNGGGNDRDR-RESS 254
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 149/214 (69%), Gaps = 7/214 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P ++K P G++Q + F +P D P + ET
Sbjct: 5 LPPNLLALFAPREPLLYLPPTDQRPWEKKPWPYDGVSQCLGDFEDPQD---TPEPTRGET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ERRAR K R E+ K E++ +DP ND +SGDP+KTLFV R++++T+E K++RE
Sbjct: 62 RDERRARKRKERDERYRLKLESEIETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FESYGP+KR+ +V+D ++ KPRGYAF+EY + RDM +AYK ADG+K+DG+RV+VDVERGR
Sbjct: 122 FESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYKYADGKKIDGKRVVVDVERGR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 251
TV +W+PRRLGGGLG TR G +YSGR E
Sbjct: 182 TVKSWKPRRLGGGLGGTRKGAPHECIKYSGRVDE 215
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 152/212 (71%), Gaps = 7/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE +GPIK++ +V +K T KPRGYAF+EY H RDM +AYK ADG+K+DGRRVLVDVERGR
Sbjct: 122 FEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
TV W PRRLGGGLG TR GG +VN ++SGRE
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 213
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 12/201 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP + K P+TG+AQ++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPCQDLLVDKNAKRAPMTGVAQYIQLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AE E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AEAKEEKRRQKDELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+REFE+YG IK++ +V D E KPRGYAFIEY +M AYK+ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 215 RGRTVPNWRPRRLGGGLGTTR 235
RGRT W PRRLGGG G TR
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTR 200
>gi|395751523|ref|XP_002829587.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Pongo abelii]
Length = 624
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 128/183 (69%), Gaps = 8/183 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 130 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 186
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 187 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 246
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLV+VERG
Sbjct: 247 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVEVERG 306
Query: 217 RTV 219
RTV
Sbjct: 307 RTV 309
>gi|195996029|ref|XP_002107883.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
gi|190588659|gb|EDV28681.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
Length = 342
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 151/214 (70%), Gaps = 8/214 (3%)
Query: 41 GLTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L +L F P+ P++Y PP + RK P TG++ F+S F + + P E
Sbjct: 4 CLPPHLSAFFTPKEPIKYLPPLDTPSHLRKRRPYTGVSVFLSQFETVRN---SAPSVVTE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T E+R R K RL+K + K ++L ++DPHN+P + DP+KTL V+RLSY+TTESK++R
Sbjct: 61 TREEKRTRQKKERLDKVSAKLQKDLAQWDPHNNPKGTEDPFKTLLVSRLSYDTTESKLRR 120
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
E E+YG +K VR + D + KP+GYAF+E+ H RDMKAAYK ADG+K+DGRR+LVDVER
Sbjct: 121 ELEAYGSVKSVRSIYDL-SGKPKGYAFVEFEHERDMKAAYKYADGKKVDGRRILVDVERS 179
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
RTV NW PRRLGGGLG TR+GGE++N ++SGRE+
Sbjct: 180 RTVKNWLPRRLGGGLGGTRLGGEDINVKHSGREE 213
>gi|134091|sp|P09406.1|RU17_XENLA RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis]
Length = 471
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 150/215 (69%), Gaps = 11/215 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDK---ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDV
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 181
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
ERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 ERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 216
>gi|148225156|ref|NP_001081603.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus laevis]
gi|80479195|gb|AAI08448.1| LOC397946 protein [Xenopus laevis]
Length = 471
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 150/215 (69%), Gaps = 11/215 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDK---ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDV
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 181
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
ERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 182 ERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 216
>gi|410982448|ref|XP_003997569.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Felis catus]
Length = 438
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 148/213 (69%), Gaps = 8/213 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM Y DG+K+DGRRVLVDVERG
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHCEYLWPDGKKIDGRRVLVDVERG 181
Query: 217 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 RTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 126/200 (63%), Gaps = 7/200 (3%)
Query: 40 TGLTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L +L +LFEPRAPL + P P ++ P TG+ V F P D P
Sbjct: 5 VNLPFSLHRLFEPRAPLFFLKPLDQLPYEKNLPSYTGIGHLVHKFENPAD---TPAAVYI 61
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ +E RA+ + + A + + P +PN + DP+KTLF++ LSY+TTE +K
Sbjct: 62 PSRLEIRAKKRQADESRHASELETATAAWHPKENPNATSDPFKTLFISNLSYDTTEESLK 121
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
RE E YG IK++ +V + +T+KPRGYAF+E+ H RDMK AYKQADGRK+DGRR++VD ER
Sbjct: 122 REMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQADGRKVDGRRIVVDFER 181
Query: 216 GRTVPNWRPRRLGGGLGTTR 235
GRT+ W+PRRLGGG+G R
Sbjct: 182 GRTIKEWKPRRLGGGVGLPR 201
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 12/201 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP E K P+TG+AQ++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPVEDLLVDKNAKRAPMTGVAQYIGLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
A+ E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AQAKEEKRRQKDELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+REFE+YG IK++ +V D E KPRGYAFIEY +M AYK+ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 215 RGRTVPNWRPRRLGGGLGTTR 235
RGRT W PRRLGGG G TR
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTR 200
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 149/212 (70%), Gaps = 7/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG+ +++S F +P D PP + ET
Sbjct: 5 LPPNLLALFAPREPIPYLPPTDKLPHEKTPGTYTGVGKYLSLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ ++PHN+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERVERKRREKAEQVAYKLEQDIALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE +G IK++ +V +K T KPRGYAF+EY H RDM +AYK ADG+K+DGRRVLVDVERGR
Sbjct: 122 FEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
TV W PRRLGGGLG TR GG +VN ++SGRE
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 213
>gi|124514052|ref|XP_001350382.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615799|emb|CAD52791.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 423
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 134/202 (66%), Gaps = 6/202 (2%)
Query: 39 PTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
G+ ++L LF+ R LE+ P +K+K +G++ F+++F E APP K E+
Sbjct: 3 AIGMPQHILILFQARPMLEFYKPIKKKKPKEYSGLSDFLNYFEEGE----APPKIKVESF 58
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ER+ + K ++ E+ K+YDP + +++ DP KTLF+ RLSYE +E K+K+EF
Sbjct: 59 KERKEKKKKEKMAYNELILKEKRKEYDPFKNEDLTSDPKKTLFIGRLSYEVSEQKLKKEF 118
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
ESYG IK V+++ DK KPRGYAFIE+ HT+ M AYK ADG+K++ RR+LVD+ERGRT
Sbjct: 119 ESYGKIKTVKIIYDKNL-KPRGYAFIEFEHTKSMNDAYKLADGKKIENRRILVDIERGRT 177
Query: 219 VPNWRPRRLGGGLGTTRVGGEE 240
+ NW PRRLGGG G R G EE
Sbjct: 178 IKNWIPRRLGGGKGPAR-GSEE 198
>gi|66910786|gb|AAH97714.1| LOC397946 protein [Xenopus laevis]
Length = 351
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 151/216 (69%), Gaps = 11/216 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDK---ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDV
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 181
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
ERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 ERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 217
>gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404), partial [Xenopus laevis]
Length = 267
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 151/216 (69%), Gaps = 11/216 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDK---ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
EFE YGPIKR+ +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDV
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDV 181
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
ERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 182 ERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 217
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 146/210 (69%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+++F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVNKLPHEKKSAGYVGLGAFLNNFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP + PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERNEQVAYKLEQEIAVWDPASIPNVTVDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNSINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKNRGYQGVGAFIKYFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DPHN P +GDP+KTLFVAR++Y+T+E K++RE
Sbjct: 62 RDERLERRRRERAEQVAYKLEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ + + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPIKKIVVSHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 9/190 (4%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL Y P P+KR+ P+TG+A ++ P DP Y P E+
Sbjct: 5 LPANLLALFAPRPPLRYLPHCDYAPDKRRTAPITGVAAYLETLRTP-DPDYVP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RR R+ + + AEK L +Y+P +DP V GDP+KTLF++RL+Y E ++RE
Sbjct: 60 WMQRRDRLREEKKAAIAEKTKAALVQYNPEHDPQVRGDPFKTLFLSRLNYNVKEPDLERE 119
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
F +GPI+R+R+V DKET K RGYAFI Y +DMKAAYK+ DG ++ RRVLVDVERGR
Sbjct: 120 FGRFGPIERIRIVRDKETGKHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERGR 179
Query: 218 TVPNWRPRRL 227
TV W+PRRL
Sbjct: 180 TVKGWKPRRL 189
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 145/238 (60%), Gaps = 10/238 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PP EK RK P TG+AQF+ F + + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHANHRKLP-YTGVAQFLGEFEDASE---TPAPVRIET 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R + + E+ K ++L ++P +P + +PY T+FVARL+Y+TTESKIKRE
Sbjct: 61 REERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYDTTESKIKRE 120
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
+++G I + +V + T KPRGY F+E+ H RDM AA K +GRK+DG RV+ DVERGR
Sbjct: 121 LDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKALNGRKIDGARVVTDVERGR 180
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRE 275
T P+WRPRRLG GLG R G + + R +EPSR RS I DRD+E
Sbjct: 181 TRPDWRPRRLGKGLGKNRQGPSDKSHRKHENGREPSR--DRSFGRTISSAHIRDRDKE 236
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 144/209 (68%), Gaps = 7/209 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVAKLPHEKKSRGYLGVGAFLKEFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP++ PN++ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEQEIAVWDPNSAPNITVDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPIKKIVLIHNSVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYS 246
TV W PRRLGGGLG TR GG EVN ++S
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPEVNIKHS 210
>gi|330795602|ref|XP_003285861.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
gi|325084166|gb|EGC37600.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
Length = 419
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 128/183 (69%), Gaps = 7/183 (3%)
Query: 71 TGMAQFVSHFAEPG--DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
TG++ + S+F +P +P VE A E+R + K + + E+ A+ LK +DP++
Sbjct: 33 TGLSSYTSYFEDPSKEEPFKREIVESA---TEKREKKRKAKEDANNERNAKHLKSWDPYS 89
Query: 129 DPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTD-KETNKPRGYAFIEY 186
P + +GDPYKT+FV+R+SY+TT+ K++ EF +G IK + LV D K K RGYAFIE+
Sbjct: 90 HPELHTGDPYKTIFVSRISYQTTQKKLEYEFSQFGNIKSIYLVKDPKNPQKHRGYAFIEF 149
Query: 187 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 246
RDMKAAYKQADG K+D RR+LVD+ERGR + NW+PR+ GGGLG TR GG +VNQ +S
Sbjct: 150 ERERDMKAAYKQADGMKIDDRRILVDIERGRVIKNWKPRKFGGGLGNTRAGGADVNQTFS 209
Query: 247 GRE 249
GRE
Sbjct: 210 GRE 212
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F EP D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEEPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L +NLL LF PR P+ Y PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPSNLLALFAPRDPIPYLPPPDKLPHEKKSQGYLGVGAFLDCFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERVERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YG IK++ ++ DK+T KPRGYAFIEY H RDM AAYK ADG+K+DG+RVLVDVER R
Sbjct: 122 FEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|313229018|emb|CBY18170.1| unnamed protein product [Oikopleura dioica]
Length = 322
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 159/290 (54%), Gaps = 54/290 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKR--KCPPLTGMAQFVSHFAEPGDPLY-APPVEK 94
L NL+ LF+PR P+E+K P P +R P +G+A FV+ F DP PP +
Sbjct: 5 LPPNLIALFQPREPVEFKNPEGDLPWERDRTKHPYSGIAPFVNDF----DPSTETPPKVR 60
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ET E+ R K +LEKG +K E L +++PH D V DP+KTLFVAR+ +ET +SK+
Sbjct: 61 VETREEKEKRKRKDKLEKGMKKTEENLDEWNPHEDDKVESDPFKTLFVARIKFETNDSKL 120
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
KREFE YG IK VR+V + + KP+GYAF+E+ RDM +AYK ADG+K+DG+RVLVDVE
Sbjct: 121 KREFEEYGRIKSVRIVENLKNGKPKGYAFVEFEKERDMHSAYKYADGKKIDGKRVLVDVE 180
Query: 215 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDR 274
RGRTV WRPRRLGGGLG +R + PS P R+ +R
Sbjct: 181 RGRTVKGWRPRRLGGGLGNSR--------------RAPS--PIRTEVDELR--------- 215
Query: 275 ERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERD 324
R + D + RD R + R + ++D
Sbjct: 216 -------------RRGGYGFAGD-----EKRDQARERAKLLDRSKREKKD 247
>gi|66828257|ref|XP_647483.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
gi|74997505|sp|Q55FQ0.1|RU17_DICDI RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|60475520|gb|EAL73455.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 131/188 (69%), Gaps = 10/188 (5%)
Query: 71 TGMAQFVSHFAEPGDPLYAPPVEK--AETPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
TG+ ++S F +P + P +K E E+R + KL++ + E+ ++ LK +DP++
Sbjct: 33 TGLRDYLSIFTDPSN---EEPFKKEHIENLEEKREKKRKLKISENDERISKSLKAWDPYS 89
Query: 129 DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP---RGYAFIE 185
+ +GDPYKT+FV+R+SY+TT+ K++ EF +GPIK + LV K++N P GYAFIE
Sbjct: 90 NSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLV--KDSNNPEKHTGYAFIE 147
Query: 186 YMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRY 245
+ RDMKAAYKQADG K+D RR++VD+ERGR + NW+PR+ GGGLG TR GG +VNQ +
Sbjct: 148 FERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKPRKFGGGLGNTRAGGVDVNQTF 207
Query: 246 SGREQEPS 253
SGRE S
Sbjct: 208 SGREMSES 215
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPASKLPHEKKNSGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PR+LGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRKLGGGLGGTRRGGPDVNIKHSG 211
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ F +P D PP K ET
Sbjct: 5 LPPNLLALFAPRDPVPYLPPVAKLPHEKKTRGYLGVGSFMDLFEDPED---TPPPTKIET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +E+ ++PH+ N + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRREKAEQVAYKLEQEIALWEPHSVANATTDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ + +K KPRGYAFIEY + RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG EVN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPEVNLKHSG 211
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 130/201 (64%), Gaps = 12/201 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC------PPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP ++ P+TG+AQ+V F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPVQELLVDKNAKRAPMTGVAQYVGLFEDPKDTPPKLPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
+ E+R + +L A K + + ++P + + DPY+TLFV R++YET+ESK+
Sbjct: 65 EQAKEEKRRQKEELL----AYKVEQGIATWNPAENSRATEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+REFE+YG IK++ +V D E+ KPRGYAFIEY +M AYK+ADG K+DG+R++VD E
Sbjct: 121 RREFEAYGKIKKLTMVHD-ESGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYE 179
Query: 215 RGRTVPNWRPRRLGGGLGTTR 235
RGRT W PRRLGGG G TR
Sbjct: 180 RGRTQKTWLPRRLGGGKGDTR 200
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|221126649|ref|XP_002157902.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hydra
magnipapillata]
Length = 351
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 126/187 (67%), Gaps = 12/187 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK------CPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L ANLL LF R P+ +KPP E K C G+ FVS+F E P PP +
Sbjct: 5 LPANLLALFSARPPIPFKPPVEGLKKRKNSHC--YVGLGDFVSNF-EVKPP---PPATRG 58
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
ET E+ R + A++ +L +DPH DPN SGDP+KTLFVAR++Y+TTESK++
Sbjct: 59 ETREEKEERKKYEKETATAKELERKLASWDPHTDPNASGDPFKTLFVARINYDTTESKLR 118
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
RE E++GPI+++ +V + KPRGYAF+E+ H RDM+AA+K +DG+K+DGRR++VDVER
Sbjct: 119 RELETHGPIRKIHMVYNFVKRKPRGYAFVEFEHERDMQAAFKHSDGKKIDGRRIVVDVER 178
Query: 216 GRTVPNW 222
GRTV +W
Sbjct: 179 GRTVKSW 185
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|256072974|ref|XP_002572808.1| U1 small nuclear ribonucleoprotein 70 kD [Schistosoma mansoni]
gi|360042919|emb|CCD78329.1| putative u1 small nuclear ribonucleoprotein 70 kD [Schistosoma
mansoni]
Length = 307
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 128/200 (64%), Gaps = 8/200 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PP EK RK P TG+AQF+ F + + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHANHRKLP-YTGVAQFLGEFEDASE---TPAPVRIET 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R + + E+ K ++L ++P +P + +PY T+FVARL+YETTESK+KRE
Sbjct: 61 REERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYETTESKLKRE 120
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
+ +G I + +V + T KPRGY F+E+ H RDM AA K +GRK+DG RV+ DVERGR
Sbjct: 121 IDVFGRINNIVMVKNVMTGKPRGYCFVEFEHERDMHAAVKSLNGRKIDGVRVVTDVERGR 180
Query: 218 TVPNWRPRRLGGGLGTTRVG 237
T P+WRPRRLG GLG R G
Sbjct: 181 TRPDWRPRRLGKGLGKNRQG 200
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 145/212 (68%), Gaps = 7/212 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+ R P+ + P P +++ G+ F+ +F +P + PP + ET
Sbjct: 5 LPPNLLALFKARDPIPFLHPIGKLPHEKQQETYIGVGTFIRYFEDPSE---TPPAMRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ERR R K + E+ A + + + +DP+N+P + DP+KTLF+AR++YET+E K++RE
Sbjct: 62 REERRERRKKEKAEETAYQLEQAIALWDPNNNPKATADPFKTLFIARINYETSEGKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YG IK+V L+ +NKPRGYAFIEY H RDM AAYK ADG+K+D RRVLVDVERGR
Sbjct: 122 FEQYGAIKQVSLIHSSISNKPRGYAFIEYAHERDMHAAYKHADGKKIDSRRVLVDVERGR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
TV W PRRLGGGLG TR GG +VN R+SGRE
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNVRHSGRE 213
>gi|156371745|ref|XP_001628922.1| predicted protein [Nematostella vectensis]
gi|156215911|gb|EDO36859.1| predicted protein [Nematostella vectensis]
Length = 245
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 125/186 (67%), Gaps = 8/186 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPL-TGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR PL + PP +K +K P L +G+ F+ F +P D P E
Sbjct: 5 LPPNLLALFAPRDPLPFAPPLDKPSWLKKTPWLYSGVGSFLHVFEDPKD---TPDPTFGE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T E+ R + + E+ A++ E++ +DP DPN GD +KTLF+ R++Y+T+ESK++R
Sbjct: 62 TREEKIERKRREKQERVAQELEEKIGSWDPQTDPNAYGDAFKTLFIGRINYDTSESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
E E YGPIK + +V + + +KPRGYAFIEY H RDM AAYK ADG+K+DGRR++VDVERG
Sbjct: 122 EMEMYGPIKHISMVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDVERG 181
Query: 217 RTVPNW 222
RTV +W
Sbjct: 182 RTVKSW 187
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K TG+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFSPREPIPYLPPASKLPHEKKNGGYTGVGIFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ + + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVTHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|389584381|dbj|GAB67113.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium cynomolgi
strain B]
Length = 494
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 5/196 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R L + P +K+K +G++++++ F E +P PP K E
Sbjct: 4 IGMPPHILILFQARPLLSFYKPIQKKKHQAYSGISEYLNLF-EDKEP---PPKIKLENAK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+EFE
Sbjct: 60 ERKERKKKEKITYNELMLKEMRKNYDPFKNEDLTNDPKKTIFIGRLSYDVNEKKLKKEFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
YG IK+V+++ DK KP+GYAFIE+ HT+ AY ADG+K+D RR+LVDVERGRTV
Sbjct: 120 VYGKIKKVKIIYDKNF-KPKGYAFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGRTV 178
Query: 220 PNWRPRRLGGGLGTTR 235
NW PRRLGGG G R
Sbjct: 179 KNWIPRRLGGGKGPPR 194
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 121/189 (64%), Gaps = 7/189 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L +LL+LF PR L Y P P+ + P T ++ F+ DP Y ET
Sbjct: 5 LPPSLLRLFAPRPALPYMPALADPKTKTAPIYTSVSSFLPLCRMGHDPDYI----ATETM 60
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
+R+ R+ + K A E + +DPH D N + +PYKTLFV+RLS++TTE +K EF
Sbjct: 61 EDRKKRLAAEKAAKTAAALQEAIDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKHEF 120
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
E++G +K V +V D +T KPRGYAFIE+ H RDMK AYK A+G K+DGRR+LVDVERGRT
Sbjct: 121 EAFGEVKSVSIVKDLKTGKPRGYAFIEFEHERDMKIAYKDAEGLKIDGRRILVDVERGRT 180
Query: 219 VPNWRPRRL 227
VP W+PRRL
Sbjct: 181 VPGWKPRRL 189
>gi|323455541|gb|EGB11409.1| hypothetical protein AURANDRAFT_14747, partial [Aureococcus
anophagefferens]
Length = 215
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 132/214 (61%), Gaps = 25/214 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPP-VEKAETPVE 100
L + +F+P PL ++ KR+ P TG+A + F APP EK ETP E
Sbjct: 1 LPPAMKAMFQPGPPLLFREKISKRRPTPYTGVAAYRDLFET-----TAPPEPEKNETPRE 55
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-----SGDPYKTLFVARLSYETTESKIK 155
RRA++ + E + A + +DP P+ +GD YKTLFVARLSY+TTE K++
Sbjct: 56 RRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLR 115
Query: 156 REFESYGPIKRVRLVTDKE--------------TNKPRGYAFIEYMHTRDMKAAYKQADG 201
REFE +G IK +R+V +++ PRGYAF+E+ DM+ AYK+ADG
Sbjct: 116 REFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRADG 175
Query: 202 RKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RK+DGRRVLVDVERGRTV NWRPR+LGGGLG+TR
Sbjct: 176 RKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTR 209
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 152/239 (63%), Gaps = 34/239 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM------------------------- 192
FE +GPIK++ +V +K T KPRGYAF+EY H RDM
Sbjct: 122 FEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGX 181
Query: 193 --KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
AAYK ADG+K+DGRRVLVDVERGRTV W PRRLGGGLG TR GG +VN ++SGRE
Sbjct: 182 VLSAAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 240
>gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526457|emb|CAH81463.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 373
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 130/196 (66%), Gaps = 6/196 (3%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL ++L LF+ R L++ P +K+K +G++ F+++F E G P PP K E+P
Sbjct: 4 IGLPPHILILFQSRPLLDFHKPIKKKKPKEYSGISDFLNYF-EDGKP---PPKIKLESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E+ K+YDP + ++S DP KTLF+ RLSYE E K+K+EFE
Sbjct: 60 ERKERKQKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
+YG IK V+++ D + KPRGYAFIE HT+ + AY ADG+K++ RR+LVD+ER RTV
Sbjct: 120 TYGKIKYVKVICD-QNKKPRGYAFIE-EHTKSVTDAYNLADGKKIENRRILVDMERARTV 177
Query: 220 PNWRPRRLGGGLGTTR 235
NW PRRLGGG G +R
Sbjct: 178 KNWLPRRLGGGKGPSR 193
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGILNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 142/210 (67%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 135 LPPNLLALFAPRDPIPYLPPPDKLPHEKKSRGYLGVGSFLDGFEDPKD---TPPPTRVET 191
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLF+AR++Y+T+ESK++RE
Sbjct: 192 REERIERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFIARINYDTSESKLRRE 251
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YG IK++ ++ DK + KPRGYAFIEY H RDM AAYK ADG+K+DG+RVLVDVER R
Sbjct: 252 FEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERAR 311
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 312 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 341
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P + PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPANKLPHEKKVGGYIGVGTFLKYFEDPKE---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGP+K++ ++ + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVER R
Sbjct: 122 FEVYGPVKKIVVIHNTVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 144/218 (66%), Gaps = 3/218 (1%)
Query: 35 GQSHPTGLTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
H TGLT +LL+LF R P+EY PPP K +K P TG+A +V F +P + PP E
Sbjct: 64 ASVHQTGLTPSLLRLFVARPPVEYHPPPAKPKKTQPYTGIADYVKLFTDPEEDPPPPPAE 123
Query: 94 KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTES 152
ET E++ R + ++ + E++ ++P DP ++ DPYKTLFV RLSY+ E+
Sbjct: 124 PKETKAEKKTRRAAEKAKENDARIEEDITSWNPKEDPKLADSDPYKTLFVGRLSYDVDEA 183
Query: 153 KIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
++REFE +G +K V +V D++ KPRGYAF+E+ DMK AY+ ADG +L+GRR+LVD
Sbjct: 184 ALRREFERFGAVKSVTVVEDQD-GKPRGYAFVEFDRESDMKHAYRSADGLRLEGRRILVD 242
Query: 213 VERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
ERGRTVP+WRPRR GGLG TR GG+ N +GR+Q
Sbjct: 243 AERGRTVPDWRPRRFNGGLGGTRRGGKTENSLVAGRDQ 280
>gi|295670647|ref|XP_002795871.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284956|gb|EEH40522.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 409
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 13/193 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
F +GPI+R+R+V D K KP RGYAFI Y +DMKAAYK+ DG ++ RRVLV
Sbjct: 122 FGRFGPIERIRIVVDTHNPKKNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 181
Query: 212 DVERGRTVPNWRP 224
DVERGRTV W+P
Sbjct: 182 DVERGRTVKGWKP 194
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 121/191 (63%), Gaps = 11/191 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL+Y P PE + LTG+AQFV + + P E+
Sbjct: 5 LPANLLALFAPRPPLKYLKPIDRAPEDVRQSDLTGVAQFVGELQNYAEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR + + E+ + E LK YDP +DP V GDP+KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARQKQEKKEELDKYLTEGLKTYDPSSDPQVRGDPFKTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+VTD P RGYAFI Y DMKAAYK+ DG ++ RRVLVDV
Sbjct: 122 FGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYERELDMKAAYKETDGIRIKDRRVLVDV 181
Query: 214 ERGRTVPNWRP 224
ERGRTV W+P
Sbjct: 182 ERGRTVKGWKP 192
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F+S F +P D PP + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVANFMSDFEDPKD---TPPPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLFVAR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 115/140 (82%)
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVR 168
++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR+
Sbjct: 4 KIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIH 63
Query: 169 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLG
Sbjct: 64 MVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLG 123
Query: 229 GGLGTTRVGGEEVNQRYSGR 248
GGLG TR GG +VN R+SGR
Sbjct: 124 GGLGGTRRGGADVNIRHSGR 143
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 9/190 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL Y P PE RK P++G+AQF+ P DP + P E+
Sbjct: 5 LPGNLLALFQPRPPLRYLQPADHAPEHRKTAPISGVAQFLEELRNP-DPDFMP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+ R R + +LE + + Y+P DP++ GDPYKTLFV+RLSY+ E ++RE
Sbjct: 60 WLLARDRKKREKLENQERTLKQGAENYNPGEDPHIRGDPYKTLFVSRLSYDVKEQDLERE 119
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
F +GPI R+RLV DKE+ KPRGYAFI + +DMKAA+K+ DG ++ RR+ VDVERGR
Sbjct: 120 FGRFGPIDRIRLVRDKESKKPRGYAFILFEREKDMKAAFKETDGMRIKDRRISVDVERGR 179
Query: 218 TVPNWRPRRL 227
T W+PRRL
Sbjct: 180 TTKGWKPRRL 189
>gi|226295399|gb|EEH50819.1| hypothetical protein PADG_06898 [Paracoccidioides brasiliensis
Pb18]
Length = 417
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 124/193 (64%), Gaps = 13/193 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP------RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
F +GPI+R+R+V D K RGYAFI Y +DMKAAYK+ DG ++ RRVLV
Sbjct: 122 FGRFGPIERIRIVVDTHNPKKNPKKSHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLV 181
Query: 212 DVERGRTVPNWRP 224
DVERGRTV W+P
Sbjct: 182 DVERGRTVKGWKP 194
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 133/196 (67%), Gaps = 5/196 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL ++L LF+ R L++ P +K+K TG+++F+++F E G P PP K E+P
Sbjct: 4 IGLPPHILILFQSRPLLDFYKPIKKKKPKEYTGISEFLNYF-EDGKP---PPKIKLESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E+ K+YDP + ++S DP KTLF+ RLSYE E K+K+EFE
Sbjct: 60 ERKERKKKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
+YG IK V+++ D++ KPRGYAFIE+ HT+ + AY ADG+K++ RR+LVD+ER RTV
Sbjct: 120 TYGKIKYVKVIYDQDK-KPRGYAFIEFEHTKSVTDAYNLADGKKIENRRILVDMERARTV 178
Query: 220 PNWRPRRLGGGLGTTR 235
NW PRRLGGG G +R
Sbjct: 179 KNWVPRRLGGGKGPSR 194
>gi|302798549|ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
gi|300151088|gb|EFJ17735.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
Length = 246
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 4/132 (3%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+ + + RL ++I + + +VRLV DK++NKPRGYAFIEY HT
Sbjct: 2 PSCLPCGIACILIVRLVCALQSARIVLLNALF--VLQVRLVHDKDSNKPRGYAFIEYFHT 59
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
RDMKAAYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG+TRVGG+EVNQ+YSGR
Sbjct: 60 RDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGDEVNQKYSGR- 118
Query: 250 QEPSRGPSRSAE 261
EP G +R+ E
Sbjct: 119 -EPQVGGARTEE 129
>gi|221057416|ref|XP_002261216.1| U1 small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|194247221|emb|CAQ40621.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 412
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 5/196 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF R PL + P +K+K +G++++V+ F E +P PP K E
Sbjct: 4 IGMPPHILILFHARPPLTFYKPIQKKKHEAYSGISEYVNLF-EDKEP---PPKIKLENAK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+EFE
Sbjct: 60 ERKERKKKEKITYNELMLKEMRKNYDPFKNVDLTEDPKKTIFIGRLSYDVNEKKLKKEFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
YG IK+V+++ DK KP+GY FIE+ HT+ AY ADG+K+D RR+LVDVER RTV
Sbjct: 120 VYGKIKKVKIIYDKNF-KPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERARTV 178
Query: 220 PNWRPRRLGGGLGTTR 235
NW PRRLGGG G R
Sbjct: 179 KNWIPRRLGGGKGPPR 194
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 164/303 (54%), Gaps = 58/303 (19%)
Query: 26 ANVLQLKLIGQSHPTGLTA----NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFV 77
A + + L+ H +T NLL LFE R PL YKPPP++ RK P ++G+++++
Sbjct: 27 AGSVPMSLLLFGHYCIMTQFLPDNLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYI 86
Query: 78 SHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPY 137
F +P D PP ET ERRAR K + E A K + + + P +P+ + DPY
Sbjct: 87 HLFEDPKD---TPPKPVYETKEERRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPY 143
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
KTLFVAR++YET+ESK++REFE +G I R+ LV DK KPRGYAFIEY H M AYK
Sbjct: 144 KTLFVARINYETSESKLRREFEQFGKITRLALVHDKN-GKPRGYAFIEYQHKESMSEAYK 202
Query: 198 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS 257
+ADG K+DGRRV+VD ERGRT +W PRRLGGG G TR
Sbjct: 203 KADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR---------------------- 240
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR 317
R+RE + +LE++H+ DRDHR HR R
Sbjct: 241 -----RLRE----------------SKAVLEAAALEMAHE---DRDHRSSSTHRSYSHDR 276
Query: 318 DRE 320
DRE
Sbjct: 277 DRE 279
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 110/130 (84%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR+ +V K + KPR
Sbjct: 36 ELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPR 95
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
GYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG
Sbjct: 96 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGA 155
Query: 240 EVNQRYSGRE 249
+VN R+SGR+
Sbjct: 156 DVNIRHSGRD 165
>gi|156085230|ref|XP_001610098.1| u1 snRNP [Babesia bovis T2Bo]
gi|154797350|gb|EDO06530.1| u1 snRNP, putative [Babesia bovis]
Length = 247
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 134/204 (65%), Gaps = 12/204 (5%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE---PGDPLYAPPVEKAE 96
G+ +LL LF+ R PLEY PP E G+A +V +F++ P DP + P ++A+
Sbjct: 4 LGMPPHLLVLFQARPPLEYIPPIENGMKKKFNGIADYVGYFSKEQVPPDPPFETPHQRAD 63
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPH-----NDPNVSGDPYKTLFVARLSYETTE 151
++R RI + ++ AE+ A + KYDP +P ++ DPYKTLFV+ + YE TE
Sbjct: 64 K--KKRERIIEHHKKQKAERDAYD-PKYDPALARGATNPWLTHDPYKTLFVSNIPYEVTE 120
Query: 152 SKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
++ +EF+ YG ++R+R++ D++ N PRGYAFIEY RDM AYK+ADGRK+ GRRVLV
Sbjct: 121 KQLWKEFDVYGRVRRIRMINDRK-NIPRGYAFIEYNDERDMVNAYKRADGRKVSGRRVLV 179
Query: 212 DVERGRTVPNWRPRRLGGGLGTTR 235
DVER RTV W P+RLGGG G +R
Sbjct: 180 DVERARTVAGWYPKRLGGGKGRSR 203
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|428186025|gb|EKX54876.1| hypothetical protein GUITHDRAFT_45393, partial [Guillardia theta
CCMP2712]
Length = 200
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 129/202 (63%), Gaps = 12/202 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
+ ++ LF PR PLE+K P +KRK P G+A+ + F P + Y +K +
Sbjct: 3 IVPHINALFAPRPPLEFKQPYSQQVGKKRKLP-YEGIAKCLDSFETPDE--YEENFKKFK 59
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPN---VSGDPYKTLFVARLSYETTESK 153
P+E+R + E+ + + +K DP+ D YKTLFV RLS+ T E K
Sbjct: 60 -PIEQRKERRERIAEERKTLSQDTVKAKAAAWDPSSYSFESDAYKTLFVGRLSFMTDEHK 118
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
+KRE E YGP+K LV DK+T+KPRGY F+E+ H RDMK AYK ADGRK+DGRR+LVDV
Sbjct: 119 LKREMEQYGPVKSAVLVYDKDTSKPRGYGFVEFEHERDMKTAYKHADGRKIDGRRILVDV 178
Query: 214 ERGRTVPNWRPRRLGGGLGTTR 235
ERGRTV +W+PR++GGGLG++R
Sbjct: 179 ERGRTVKDWKPRKIGGGLGSSR 200
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|242761917|ref|XP_002340274.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
gi|218723470|gb|EED22887.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
Length = 381
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 11/191 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K ++G+A V + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPDDCKKSTISGVAGLVGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RRAR+ + E+ E ++KYDP ND + GDP++TLFVARLSY+ ES ++RE
Sbjct: 62 WLQRRARLKLEKKERMERLLTEGVEKYDPSNDAQIRGDPFRTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLVTDKE---TNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D E + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVDV
Sbjct: 122 FGRFGPIERIRIVKDTEKQNSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDV 181
Query: 214 ERGRTVPNWRP 224
ERGRTV W+P
Sbjct: 182 ERGRTVKGWKP 192
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F+S F +P D P + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMSDFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+++ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 125/193 (64%), Gaps = 13/193 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ + + G+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPADRAPDDIEPSKIGGVAQFVDELQKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + + K + E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ ++RE
Sbjct: 62 WLQRKARLKEEKKAKLEKHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLERE 121
Query: 158 FESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
F +GPI+R+R+V D K KP RGYAFI Y +DMKAAYK+ DG ++ RRVLV
Sbjct: 122 FGRFGPIERIRIVVDTHNPKKNPKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVLV 181
Query: 212 DVERGRTVPNWRP 224
DVERGRTV W+P
Sbjct: 182 DVERGRTVKGWKP 194
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 123/198 (62%), Gaps = 9/198 (4%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHF--AEPGDPLYAPPVEKAET 97
G+ ++L LF+ R L + P +K+K +G++++++ F EP PP K E
Sbjct: 4 IGMPPHILILFQARPLLSFYKPIQKKKPQAYSGISEYLNLFEDKEP------PPKIKLEN 57
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+E
Sbjct: 58 AKERKERKKKEKITYNELMLKEMRKSYDPFKNADLTNDPKKTIFIGRLSYDVNEKKLKKE 117
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YG IK+V+++ DK KP+GY FIE+ HT+ AY ADG+K+D RR+LVDVERGR
Sbjct: 118 FEVYGKIKKVKIIYDKNF-KPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGR 176
Query: 218 TVPNWRPRRLGGGLGTTR 235
TV NW PRRLGGG G R
Sbjct: 177 TVKNWIPRRLGGGKGPPR 194
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 2/128 (1%)
Query: 123 KYDPHN-DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGY 181
K+DP+ DP + D YKTLFV R+SYETTE +++ EFE YGP+K VRLV D E K RGY
Sbjct: 14 KWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPE-GKSRGY 72
Query: 182 AFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEV 241
F+EY DMKAAYK ADG+K+DGRRV+VDVERGRTV +W PR+ GGG+ TR GG +V
Sbjct: 73 GFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGISETRKGGADV 132
Query: 242 NQRYSGRE 249
N +YSGRE
Sbjct: 133 NVKYSGRE 140
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 142/210 (67%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 142/210 (67%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAHFMTDFEDPED---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 141/210 (67%), Gaps = 7/210 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPQD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKMATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
TV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 125/230 (54%), Gaps = 47/230 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK-----------------------RKCPPLTGMAQFVS 78
L +L++LF PR PLEY P + R PLTG+A V
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPISRHDRNPAATPLTKDASLLSSSHRRRIRTPLTGVAATVE 64
Query: 79 HFAE----------------PGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELK 122
A L PV E E K R EK A K + L+
Sbjct: 65 RIASDTAAAGTSTDDIAVETSTSNLTHAPVTLTEIAAE------KTRAEKAAIKT-KGLE 117
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
Y P+ + N + DPYKTLF+ARLSY+TTE + R+FE YGPI+++ L+ +K+ K RGYA
Sbjct: 118 TYKPNQNANATADPYKTLFLARLSYDTTEKDLHRQFEVYGPIQQITLIRNKQ-GKSRGYA 176
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
FI Y RDMKAAYK A+G K++GRRV+VDVERGRTV +W+P RLGGGLG
Sbjct: 177 FIAYESERDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLGGGLG 226
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 129/205 (62%), Gaps = 14/205 (6%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ +LL LF+ R PL++ P + + G+A F+ F D P E ETP
Sbjct: 4 LGMPPHLLVLFQARPPLQHVDPLPSKPVRQIDGLAGFLDSF----DAETPPKKEPFETPR 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYETT 150
+RR + + L K E+ + +YDP DP + + DPY+TLFVA ++Y+ T
Sbjct: 60 QRRDKRKRETLLKYKEELKKRASEYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 151 ESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
E ++ +EF++YG I+RVR++ D+ +NKPRGYAFIEY + RDM AYK+ADG+K+ GRRV+
Sbjct: 120 EKQLSKEFQTYGKIRRVRMIHDR-SNKPRGYAFIEYENERDMVTAYKRADGKKISGRRVI 178
Query: 211 VDVERGRTVPNWRPRRLGGGLGTTR 235
VDVER RTV W PRRLGGG G +R
Sbjct: 179 VDVERARTVEGWLPRRLGGGKGKSR 203
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 107/126 (84%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR+ +V K + KPRGYAF
Sbjct: 2 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 61
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
IEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN
Sbjct: 62 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNI 121
Query: 244 RYSGRE 249
R+SGR+
Sbjct: 122 RHSGRD 127
>gi|145538127|ref|XP_001454769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422546|emb|CAK87372.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 118/178 (66%), Gaps = 5/178 (2%)
Query: 119 EELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKE 174
EELKK ++P DPN++ +PYKTLFV RL+Y TT+ K+++EFE YGPIK +R++ D
Sbjct: 115 EELKKLLQLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDST 174
Query: 175 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 234
+KPRGYAFIEY +K AYK A +++DGR+++VD+ERGRT+ WRPRRLGGGLG
Sbjct: 175 QDKPRGYAFIEYESKNSVKQAYKYAVDKRIDGRKLVVDIERGRTILKWRPRRLGGGLGEL 234
Query: 235 RVG-GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKS 291
R EE++++ E R ++ E + + RERSR + + ++RE+S
Sbjct: 235 RRSRSEELSKKPKEEHVEKDEEDKRRKSKKVEEVKPTKKPRERSRSKSVKKHKKREES 292
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 116/171 (67%), Gaps = 4/171 (2%)
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RK P ++G+A++V F +P D PP ET ERRAR K + E A K + + +
Sbjct: 26 RKRPKMSGLAEYVHLFEDPKD---TPPKPIFETKEERRARRRKEKEELLAYKIEQGIATW 82
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFI 184
P +P + DPYKTLFVAR++YET+ESK++REFE +G I ++ LV D KPRGYAFI
Sbjct: 83 APAENPTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHDP-NGKPRGYAFI 141
Query: 185 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
EY H +M AYK+ADG K+DGRRV+VD ERGRT +W PRRLGGG G TR
Sbjct: 142 EYQHKENMSEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR 192
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 141/209 (67%), Gaps = 7/209 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F+ F +P D P + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMDDFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
FE YGPIK++ L+ D+++ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER R
Sbjct: 122 FEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
Query: 218 TVPNWRPRRLGGGLGTTRVGGEEVNQRYS 246
TV W PRRLGGGLG TR GG +VN ++S
Sbjct: 182 TVKGWLPRRLGGGLGGTRRGGNDVNIKHS 210
>gi|452986309|gb|EME86065.1| hypothetical protein MYCFIDRAFT_7010, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 203
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 123/204 (60%), Gaps = 19/204 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-----PGDPLYAPPV 92
L NLL LF+PR PL Y PP PE RK + G+AQF+ E DP+ +
Sbjct: 5 LPPNLLALFQPRPPLRYMPPNDYAPENRKTATVDGVAQFLPALEEYKEEHKDDPVTESWL 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
+K + + K +E G ++ Y P+ D N+ GD +KTLF++RL Y+
Sbjct: 65 QKRDRETMEKQEKQKWLVEGGYKEF------YKPNEDENIRGDAFKTLFISRLPYDVGTK 118
Query: 153 KIKREFESYGPIKRVRLVTDK----ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
+++EF +GPI+R+R+VTD+ + KPRGYAFI + +DMKAAYK++D + GR+
Sbjct: 119 DLEKEFGRFGPIERIRIVTDRGEGPKKGKPRGYAFILFEREKDMKAAYKESDALYIKGRK 178
Query: 209 VLVDVERGRTVPNWRPRRLGGGLG 232
VLVDVERGRTV WRPRR GGG+G
Sbjct: 179 VLVDVERGRTVAGWRPRRFGGGMG 202
>gi|145542919|ref|XP_001457146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424961|emb|CAK89749.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 114/178 (64%), Gaps = 14/178 (7%)
Query: 119 EELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKE 174
EELKK ++P DPN++ +PYKTLFV RL+Y TT+ K+++EFE YGPIK +R++ D
Sbjct: 123 EELKKLLQLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDST 182
Query: 175 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 234
+KPRGYAFIEY +K AYK A +++DGR+++VD+ERGRT+ WRPRRLGGGLG
Sbjct: 183 QDKPRGYAFIEYESKNSVKQAYKYAVDKRIDGRKLVVDIERGRTILKWRPRRLGGGLGEL 242
Query: 235 RVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSL 292
R R +E S+ P + ED+ + +E + + RER R KS+
Sbjct: 243 R----------RSRSEEISKKPKEEHVEKDEEDKRRKQKKEEVKPAKKPRERSRSKSV 290
>gi|240275269|gb|EER38783.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 421
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 19/199 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
+REF +GPI+R+R+V D K KP RGYAFI Y +DMKAAYK+ DG ++ RR
Sbjct: 119 EREFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRR 178
Query: 209 VLVDVERGRTVPNWRPRRL 227
VLVDVERGRTV W+PRR
Sbjct: 179 VLVDVERGRTVKGWKPRRF 197
>gi|225561665|gb|EEH09945.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 423
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 19/199 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
+REF +GPI+R+R+V D K KP RGYAFI Y +DMKAAYK+ DG ++ RR
Sbjct: 119 EREFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRR 178
Query: 209 VLVDVERGRTVPNWRPRRL 227
VLVDVERGRTV W+PRR
Sbjct: 179 VLVDVERGRTVKGWKPRRF 197
>gi|429327719|gb|AFZ79479.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Babesia equi]
Length = 221
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 15/206 (7%)
Query: 40 TGLTANLLKLFEPRAPLEY-KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
G+ +LL LF+ R PLEY +P PEK K + G++ F S + + P V ETP
Sbjct: 4 LGMPPHLLVLFQARPPLEYVEPMPEKPKRK-IDGLSDFTSFLTKDEE---RPQVVPFETP 59
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDP---------NVSGDPYKTLFVARLSYET 149
RR R + RL + + + ++KYDP+ DP ++ DPYKTLFV+ ++YE
Sbjct: 60 KMRRDRKKRKRLTEHMQDLKKRIEKYDPNYDPRLARGSSTPFLTHDPYKTLFVSNIAYEV 119
Query: 150 TESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
TE ++ +EFE YG I+R+R++ D++ NKPRGYAFIE+ RDM AAYK+ADGRK+ GRRV
Sbjct: 120 TERQLWKEFEVYGRIRRIRMIYDQD-NKPRGYAFIEFDSERDMVAAYKRADGRKISGRRV 178
Query: 210 LVDVERGRTVPNWRPRRLGGGLGTTR 235
+VDVER RTV W PRRLGGG G +R
Sbjct: 179 VVDVERARTVEGWLPRRLGGGKGPSR 204
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
Query: 42 LTANLLKLFEPRAPLEYKP-------PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEK 94
L LL LF+PR PL P P E+ PL+G+A +VS F +P D AP E
Sbjct: 5 LPPYLLNLFKPRPPLPQIPEKDLAPEPHERTYNQPLSGVATYVSKFEDPKD---APKAEP 61
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ER+A+ + EK + ++DP DPN GD YKTLFV RL+Y+ TE +
Sbjct: 62 TLNKAERKAKKRQAAEEKNKVVLEKARDEWDPEKDPNAQGDAYKTLFVGRLNYDVTEDDL 121
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+E ESYG +++V +V DK + KPRGYAF+E+ H RDM+AAY+ ADG +L+GRR++VD E
Sbjct: 122 LKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRAAYRYADGMRLNGRRIVVDFE 181
Query: 215 RGRTVPNWRP 224
RGRTV W P
Sbjct: 182 RGRTVDGWFP 191
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 117/191 (61%), Gaps = 11/191 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K ++G+A + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDCKKSTISGVAALLGELKNYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RRAR + E+ E ++KYDP D + GDP++TLFVARLSY+ ES ++RE
Sbjct: 62 WLQRRARQKLEKKERLERLITEGVEKYDPATDAQIRGDPFRTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D E P RGYAFI Y +DMKAAYK+ DG ++ RRVLVDV
Sbjct: 122 FGRFGPIERIRIVKDSENPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDV 181
Query: 214 ERGRTVPNWRP 224
ERGRTV W+P
Sbjct: 182 ERGRTVKGWKP 192
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 129/223 (57%), Gaps = 35/223 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP-----PEKRKCP----------------PLTGMAQFVSHF 80
L +L++LF PR PLEY P P+ P PLTG+A ++
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPIRRYDPDPNAVPLSKDGTQISRRKTIRTPLTGVASYLERV 64
Query: 81 -------AEPGDPLYAPPVEKAETPVERRARIHKLRLE-KGAEKAAEE---LKKYDPHND 129
E D + + RA + ++ LE + A KAA + L+ Y P N+
Sbjct: 65 KQETADRGESTDDIAL--SSSSSALTLSRATLREIELESRAASKAATKQRGLETYKPSNN 122
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+ + D YKTLF+ARL Y TES + REF+ YGPI++++L+ DK K RGYAFI Y
Sbjct: 123 PDATPDAYKTLFLARLDYSVTESDLHREFDMYGPIEQIKLIRDKN-GKSRGYAFIAYERE 181
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
RDMKAAYK A+G K++GRRV+VDVERGRTV +W+P RLGGGLG
Sbjct: 182 RDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLGGGLG 224
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 123/195 (63%), Gaps = 12/195 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y PP PE K + G+A F+ + G+ + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVPPIDRAPEDVKKSSIGGVADFLGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ YDP NDP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WLQRKWRQKLEKKERLNKQLTECLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLV----TDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
F +GPI+R+R+V T K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVD
Sbjct: 122 FGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 181
Query: 213 VERGRTVPNWRPRRL 227
VERGRTV W+PRR
Sbjct: 182 VERGRTVKGWKPRRF 196
>gi|357518363|ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523492|gb|AET03946.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 314
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 87/91 (95%), Gaps = 1/91 (1%)
Query: 192 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 251
MKAAYKQADGRK++GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG+EVNQR+SGREQ+
Sbjct: 1 MKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQ 60
Query: 252 PSRGPSRSAEPRIREDRHGDRDRERSRERGR 282
S GPSRS EPR+RE+RH DRDRE+SRERG+
Sbjct: 61 QS-GPSRSEEPRVREERHADRDREKSRERGK 90
>gi|294461893|gb|ADE76503.1| unknown [Picea sitchensis]
Length = 221
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query: 187 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 246
MHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG+TRVGGEEVNQ+YS
Sbjct: 1 MHTRDMKTAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYS 60
Query: 247 GRE-QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERE-REKSLELSHDRPRDRDH 304
GRE Q S GP R EP+IRE+RH DR ER ER RDR+R RE+ E SH+R R+R H
Sbjct: 61 GREPQLLSTGPPRIEEPKIREERHDDRS-ERDNERERDRDRNVREREPERSHERSRERSH 119
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 122/187 (65%), Gaps = 5/187 (2%)
Query: 41 GLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
G+ ++L LFE R PLE+ P + GMAQ+V F++ P+ P ETP E
Sbjct: 5 GMPPHILALFEARPPLEHLPFADTTLRRKPGGMAQYVKEFSDE-IPV---PQPHFETPKE 60
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR +K ++E + +++YDP + +++ DPYKTLF+ L+YE TE +++ EFE+
Sbjct: 61 RRARKNKEKIEAHLLRQKNLIEQYDPKSGNSLTHDPYKTLFIGNLAYEATERQLRSEFEA 120
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 220
YG IKR+R++ D N PRGYAFIE+ R+M AYK+ DGRK+ GRRV+VDVER RTV
Sbjct: 121 YGKIKRIRIIADANGN-PRGYAFIEFDTEREMVNAYKRGDGRKIAGRRVIVDVERSRTVA 179
Query: 221 NWRPRRL 227
W PRRL
Sbjct: 180 GWLPRRL 186
>gi|84994904|ref|XP_952174.1| U1 small nuclear ribonucleoprotein 70 kDa [Theileria annulata
strain Ankara]
gi|65302335|emb|CAI74442.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Theileria
annulata]
Length = 227
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 14/205 (6%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ +LL LF+ R PL++ P + + G+ F+ F P P ETP
Sbjct: 4 LGMPPHLLVLFQARPPLQHVDPLPSKPIRQIDGLCGFLDSFNSETPPKKEP----FETPR 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYETT 150
+RR + + RL K E+ ++ +YDP DP + + DPY+TLFVA ++Y+ T
Sbjct: 60 QRRDKRKRERLLKYKEELKKKASQYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 151 ESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
E ++ +EF++YG I+RVR++ D+ +NKPRGYAFIEY RDM AYK+ADGRK+ GRRV+
Sbjct: 120 EKQLSKEFQTYGKIRRVRMIHDR-SNKPRGYAFIEYESERDMVTAYKRADGRKISGRRVI 178
Query: 211 VDVERGRTVPNWRPRRLGGGLGTTR 235
VDVER RTV W PRRLGGG G +R
Sbjct: 179 VDVERARTVEGWLPRRLGGGKGKSR 203
>gi|403222137|dbj|BAM40269.1| U1 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 222
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 18/207 (8%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFA--EPGDPLYAPPVEKAET 97
G+ +LL LF+ R PLE P + + G++ F+ F+ EP P E ET
Sbjct: 4 LGMPPHLLVLFQARPPLERVDPLPNKPVRQIDGISDFLDSFSKEEP------PKKEPFET 57
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYE 148
P +RR + + RL + E+ ++ YDP DP + + DPY+TLFVA ++YE
Sbjct: 58 PRQRRDKRKRERLIRYEEELKRRVESYDPKYDPRLARGGTSSWLTHDPYRTLFVANIAYE 117
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
TE ++ +EFE YG I+RVR++ D++ NKPRGYAFIE+ RDM AYK+ DG+K+ GRR
Sbjct: 118 VTERQLCKEFEVYGKIRRVRMIHDRK-NKPRGYAFIEFESERDMVLAYKRGDGKKISGRR 176
Query: 209 VLVDVERGRTVPNWRPRRLGGGLGTTR 235
V+VDVER RTV W PRRLGGG G +R
Sbjct: 177 VIVDVERARTVEGWLPRRLGGGKGRSR 203
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 161/283 (56%), Gaps = 14/283 (4%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL +LL F+ R PL Y P + + G+A + + D P + E+P
Sbjct: 4 VGLPEDLLCYFQARPPLPYIPNVKTKPHRKYEGIADLIHNIEGIFDKGLPPIIIPFESPR 63
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPN-VSGDPYKTLFVARLSYETTESKIKREF 158
E+R ++ ++L E+ ++++YDP N + ++ DPY TLFV RLSY+TTE +++EF
Sbjct: 64 EKREKLRAIKLATYNEELQIKIREYDPRNTSSDMTDDPYNTLFVGRLSYDTTERTLRKEF 123
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
E+YGPIK++ L+TD + +GYAFIEY +K AY+ ++ + +DGR+V+VDVERGRT
Sbjct: 124 ETYGPIKKICLITDL-NGQSKGYAFIEYESESSLKEAYRYSN-KVIDGRKVIVDVERGRT 181
Query: 219 VPNWRPRRLGGGLGTTR---VGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR-HGD-RD 273
V NW PRRLGGG G R + S + + P R+++ +RE R HG R+
Sbjct: 182 VENWLPRRLGGGKGPPRGSETWAKSKKNSISRQSNQSYCAPYRNSDSYLREQRPHGGYRN 241
Query: 274 RERSRER-GRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR 315
R ++ R GR +++ + S++ +R H R H RDR
Sbjct: 242 RYKANSRPGRSDKQKYSDQYQHSYN---NRGHF--RGHSTRDR 279
>gi|154283073|ref|XP_001542332.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410512|gb|EDN05900.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 371
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 123/196 (62%), Gaps = 19/196 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
+REF +GPI+R+R+V D KP RGYAFI Y +DMKAAYK DG ++ RR
Sbjct: 119 EREFGRFGPIERIRIVVDTHNPKNNAKKPHRGYAFIVYEREQDMKAAYKVTDGIRIKDRR 178
Query: 209 VLVDVERGRTVPNWRP 224
VLVDVERGRTV W+P
Sbjct: 179 VLVDVERGRTVKGWKP 194
>gi|302786704|ref|XP_002975123.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
gi|300157282|gb|EFJ23908.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
Length = 137
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 100/140 (71%), Gaps = 13/140 (9%)
Query: 34 IGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
+ +SHPTGLT NLL+LF+P P+EYK P EK++ PP TG+AQFVS F ++
Sbjct: 1 LAKSHPTGLTPNLLRLFDPPPPVEYKEPIEKKELPPYTGIAQFVSCFENLS-------ID 53
Query: 94 ------KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSY 147
K ET ERRAR++ RLEKG EK AEE+ KYDP +DPN GDPYKTLF+ +LSY
Sbjct: 54 DQESQAKVETIAERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSY 113
Query: 148 ETTESKIKREFESYGPIKRV 167
ETTE +++REFE YGP+KRV
Sbjct: 114 ETTEHRLQREFERYGPVKRV 133
>gi|325091104|gb|EGC44414.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 452
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 19/199 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRVRLVTD-----KETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
+REF +GPI+R+R+V D K KP RGYAFI Y +DMKAAYK+ DG ++ RR
Sbjct: 119 EREFGRFGPIERIRIVVDTHNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRR 178
Query: 209 VLVDVERGRTVPNWRPRRL 227
VLVDVERGRTV W+PRR
Sbjct: 179 VLVDVERGRTVKGWKPRRF 197
>gi|357627216|gb|EHJ76977.1| hypothetical protein KGM_19833 [Danaus plexippus]
Length = 392
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 141/234 (60%), Gaps = 31/234 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ Y PP P ++K G+ F++ F P + PP + ET
Sbjct: 5 LPPNLLALFAARDPIPYLPPAAKLPHEKKQKGYDGVGAFLNVFEHPSE---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP + +GDP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQTAYKLEQEIALWDPTTNAKATGDPFKTLFVARVNYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM------------------------K 193
FE YGPIK++ +V KE KPRGYAFIEY H RDM
Sbjct: 122 FEGYGPIKKIHMVYSKENGKPRGYAFIEYEHERDMHSAQAASASALLQEGRSQRPRSAIV 181
Query: 194 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
AYK ADG+K+DG+RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 182 TAYKHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGADVNIKHSG 235
>gi|213410617|ref|XP_002176078.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
gi|212004125|gb|EEB09785.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 126/190 (66%), Gaps = 9/190 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L N+L LF PR L Y PP P +R P ++G+A ++ FA+ D Y P ++
Sbjct: 5 LPPNILALFAPRPQLRYLPPTDVSPGERATPRVSGIAAYL-QFAKTHDNDYKP----TQS 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R + + K EK E K+++P D N+ GDPYKT+F+ RLSY+T ES+I+RE
Sbjct: 60 LEEQRLLRKEEKQRKHVEKLREMRKRWNPDEDRNIVGDPYKTIFIGRLSYDTKESEIERE 119
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
F YGPI R+R+V DK+++KPRGYAF+ + RD+KAAY+ +D ++GR+V+VDVERGR
Sbjct: 120 FIRYGPIDRIRIVRDKDSDKPRGYAFVVFERERDLKAAYRASDRLYINGRKVVVDVERGR 179
Query: 218 TVPNWRPRRL 227
TV +W PRRL
Sbjct: 180 TVKDWYPRRL 189
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 124/189 (65%), Gaps = 12/189 (6%)
Query: 41 GLTANLLKLFEPRAPLEYKPPPEKRKCPP----LTGMAQFVSHFAEPGDPLYAPPVEKAE 96
G+ +LL LF PR P Y+ P + RK P LTG+A FV +F E G+P P E E
Sbjct: 5 GMPPHLLALFCPRPPQAYEKP-QIRKAPVTAHHLTGLADFVEYF-EGGEP---PEREHGE 59
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
TP+ER+ R ++ E+ E LK Y P N+ VSGDP+KTLFVAR++YETTE +++
Sbjct: 60 TPLERKKR-RAKEKKEKYEELIERLKADYKPQNNDKVSGDPFKTLFVARVAYETTEKQLQ 118
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
R F YGPI++V ++ D E + RGYAFIEY + +K AYK ADG K+DGRRVLVDVER
Sbjct: 119 RIFGEYGPIRKVTIIHDLE-GRSRGYAFIEYDNENSLKQAYKNADGIKVDGRRVLVDVER 177
Query: 216 GRTVPNWRP 224
GRTV W P
Sbjct: 178 GRTVSGWIP 186
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 143/220 (65%), Gaps = 21/220 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP------------PEKRKCPPLTGMAQFVSHFAEPGDPLYA 89
L L L PR PL PP P PP G GDP A
Sbjct: 36 LPPTFLALLAPRDPLPSPPPREKPPKKKHTNHPTCAIAPPPRGFG---------GDPRDA 86
Query: 90 PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYET 149
PP +AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+T
Sbjct: 87 PPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDT 146
Query: 150 TESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
TESK++REFE YGPIKR+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRV
Sbjct: 147 TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRV 206
Query: 210 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
LVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 207 LVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 246
>gi|323447116|gb|EGB03066.1| hypothetical protein AURANDRAFT_34517 [Aureococcus anophagefferens]
Length = 229
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 112/175 (64%), Gaps = 20/175 (11%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-----SGDPYKTLFVARLSYETTESKI 154
ERRA++ + E + A + +DP P+ +GD YKTLFVARLSY+TTE K+
Sbjct: 1 ERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKL 60
Query: 155 KREFESYGPIKRVRLVTDKE--------------TNKPRGYAFIEYMHTRDMKAAYKQAD 200
+REFE +G IK +R+V +++ PRGYAF+E+ DM+ AYK+AD
Sbjct: 61 RREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGTPRGYAFVEFERESDMRDAYKRAD 120
Query: 201 GRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSR 254
GRK+DGRRVLVDVERGRTV NWRPR+LGGGLG+TR G N G + +PSR
Sbjct: 121 GRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKRGAAPNNGSRPGGQFQPSR 175
>gi|315042121|ref|XP_003170437.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311345471|gb|EFR04674.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 405
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 121/194 (62%), Gaps = 11/194 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKSSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ A++ E L ++P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKQEQAAKRLEEGLSTFNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D + P RGYAFI Y +DMKAAYK+ DG ++ RR LVDV
Sbjct: 122 FGRFGPIERIRIVKDTQNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVDV 181
Query: 214 ERGRTVPNWRPRRL 227
ERGRTV W+PRR
Sbjct: 182 ERGRTVKGWKPRRF 195
>gi|258567044|ref|XP_002584266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905712|gb|EEP80113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 397
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 117/191 (61%), Gaps = 15/191 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL+Y P PE + + G+AQF+ + + P E+
Sbjct: 5 LPANLLALFAPRPPLKYLKPIDRAPEDTRPSDIGGVAQFLGELQNYAEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR + E+ E L+KYDP++DP V GDP++TLFV+RLSY+ ES ++RE
Sbjct: 62 WLQRKARQKLEKKEQLERYITEGLEKYDPNSDPQVRGDPFRTLFVSRLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+VTD P RGYAFI Y +DM K+ DG ++ RRVLVDV
Sbjct: 122 FGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYEREQDM----KETDGIRIKDRRVLVDV 177
Query: 214 ERGRTVPNWRP 224
ERGRTV W+P
Sbjct: 178 ERGRTVKGWKP 188
>gi|296816264|ref|XP_002848469.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841494|gb|EEQ31156.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 414
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 121/194 (62%), Gaps = 11/194 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ A L +Y+P DP + GDP++TLFV+RLSYE E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQAEKRLAAGLTEYNPSEDPQIRGDPFRTLFVSRLSYEVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D + P RGYAFI Y +DMKAAYK+ DG ++ RR LVDV
Sbjct: 122 FGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVDV 181
Query: 214 ERGRTVPNWRPRRL 227
ERGRTV W+PRR
Sbjct: 182 ERGRTVKGWKPRRF 195
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 10/201 (4%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G++ +LLK F+ R PL Y P P +R P G+A ++ + D + PP E +
Sbjct: 4 VGMSNDLLKFFQARPPLPYVPYPNRRPHKPYQGLADLINENPDLFDKVNTPP----EPYI 59
Query: 100 ERRAR--IHKL-RLEKGAEKAAEELKKYDPH--NDPNVSGDPYKTLFVARLSYETTESKI 154
++ R KL R++ + ++++ Y+P N N + DPY TLF+ARL+Y+TTE +
Sbjct: 60 SKKMRRETEKLQRIQNYMKDMRKKIESYNPMEENVDNKTFDPYNTLFIARLNYDTTERTL 119
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
KRE E YG I +R+V D + + RGYAF+E+ + +K AYK + + +DG +VLVDVE
Sbjct: 120 KRELEVYGKILNLRIVKDFQ-GESRGYAFVEFDNEDSLKEAYKSFNKKSIDGWKVLVDVE 178
Query: 215 RGRTVPNWRPRRLGGGLGTTR 235
RGRTV NW P+RLGGGLG R
Sbjct: 179 RGRTVENWLPKRLGGGLGKVR 199
>gi|167517869|ref|XP_001743275.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778374|gb|EDQ91989.1| predicted protein [Monosiga brevicollis MX1]
Length = 383
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 12/188 (6%)
Query: 49 LFEPRAPLEYKPPP-------EKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-EKAETPVE 100
LFEP P+++ P E++ PLTG++ ++ F P P V + ET
Sbjct: 12 LFEPGPPIKHVPAAELQVENFERKYNAPLTGISAYLDQFETTAPP---PRVGQFLETREA 68
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
R+ R K +E+ + + L+ + P +P + DP+KTLFV RLSY E +K+EF +
Sbjct: 69 RKQRKAKEAIERQEPQLSAALEAWKPKENPKATSDPFKTLFVGRLSYALDEEVLKKEFST 128
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 220
YGP+K V LV D + K RGYAFIE+ H D+KAAYK DGRK++GRRV+VDVERGRTV
Sbjct: 129 YGPVKDVSLVRDAD-GKSRGYAFIEFEHENDLKAAYKYGDGRKIEGRRVVVDVERGRTVD 187
Query: 221 NWRPRRLG 228
+W+PRRLG
Sbjct: 188 DWKPRRLG 195
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 10/201 (4%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G++ +LLK F+ R PL Y P P +R P G+A ++ + D + PP E +
Sbjct: 4 IGMSNDLLKFFQARPPLPYVPYPNRRPHKPYQGLADLINENPDLFDKVNTPP----EPYI 59
Query: 100 ERRAR--IHKL-RLEKGAEKAAEELKKYDPHNDP--NVSGDPYKTLFVARLSYETTESKI 154
++ R KL R++ + ++++ Y+P D N + DPY TLF+ARL+Y+TTE +
Sbjct: 60 SKKMRRETEKLQRIQNYMKDMRKKIESYNPMEDNVDNKTFDPYNTLFIARLNYDTTERTL 119
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
KRE E YG I +R+V D + + RGYAF+E+ + +K AYK + + +DG +VLVDVE
Sbjct: 120 KRELEVYGKILNLRIVKDFQ-GESRGYAFVEFDNEDSLKEAYKSFNKKSIDGWKVLVDVE 178
Query: 215 RGRTVPNWRPRRLGGGLGTTR 235
RGRTV NW P+RLGGGLG R
Sbjct: 179 RGRTVENWLPKRLGGGLGKVR 199
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 30/212 (14%)
Query: 33 LIGQSHPTGLTAN------LLKLFEPRAPLEYKPPPEKRKCPPL----TGMAQFVSHFAE 82
L+ Q G AN L LF R PLEY+ P EK +C PL G+ + + F +
Sbjct: 5 LLLQPSTLGFVANQDMPHHLSILFRARPPLEYQKPIEKGRCKPLRSYFDGVRDYFAMFED 64
Query: 83 PGD---PLYAPPVEKAETPVERRAR-------IHKLRLEKGAEKAAEELKKYDPHNDPNV 132
+ P VEK++ ER + +H+ E+LK+++P+ D +
Sbjct: 65 VNETEKPQQKQEVEKSDVKKERIKKEKIIDHLVHQ----------QEDLKQWNPYKDQKI 114
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM 192
GDP+KT+ V+RLSY+T E +K+EFE YGPIKRVR++ D+ + KP+GYAFIEY + RD
Sbjct: 115 KGDPFKTIVVSRLSYKTDEKTLKKEFEVYGPIKRVRIIIDQHSGKPKGYAFIEYDNERDF 174
Query: 193 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
+ A ++ +GR++DG RV+VD ERGRT +W P
Sbjct: 175 QLALERGNGRRVDGARVVVDYERGRTKTDWIP 206
>gi|327292644|ref|XP_003231020.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326466826|gb|EGD92279.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 405
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 11/194 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D + P RGYAFI Y +DMKAAYK+ DG ++ RR LVDV
Sbjct: 122 FGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVDV 181
Query: 214 ERGRTVPNWRPRRL 227
ERGRTV W+PRR
Sbjct: 182 ERGRTVKGWKPRRF 195
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQ++ + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVHPIDRAPEDVKKSTIGGIAQYLGEVKNYEEEI---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + EK ++ E L+ YDP ND GDP++TLFVARLSY+ E+ ++RE
Sbjct: 62 WLQRKWRQKLEQKEKLGKQLTESLQVYDPSNDSQARGDPFRTLFVARLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
F +GPI+RV VT K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVDVERG
Sbjct: 122 FGRFGPIERVHTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERG 181
Query: 217 RTVPNWRPRRL 227
RTV W+PRR
Sbjct: 182 RTVKGWKPRRF 192
>gi|145544312|ref|XP_001457841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425659|emb|CAK90444.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 92/122 (75%)
Query: 114 AEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDK 173
+E+ + L+ ++P D N++ DPYKTLFV RL++ TT+ K+++EFE YGPIK VR+V D
Sbjct: 114 SEEVRKRLQTWNPFEDANITSDPYKTLFVGRLNFATTDKKLRKEFEEYGPIKSVRIVRDS 173
Query: 174 ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGT 233
+KPRGYAFIEY +K+AYK A +++DGR+V+VD+ERGRT+ WRPR LGGGLG
Sbjct: 174 THDKPRGYAFIEYESKNSVKSAYKYAVDKRVDGRKVVVDIERGRTILKWRPRYLGGGLGE 233
Query: 234 TR 235
R
Sbjct: 234 LR 235
>gi|328858676|gb|EGG07788.1| hypothetical protein MELLADRAFT_35320 [Melampsora larici-populina
98AG31]
Length = 203
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 15/196 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLY--APPVEKAETP- 98
L NLLKLF PRAPL Y P + P ++ + ++ + D L A + + ET
Sbjct: 7 LPPNLLKLFAPRAPLPYCKPLGRD--PDVSIHKKHITCVSPLLDQLKLDAATINEDETLT 64
Query: 99 ------VERRARIHKLRLEKGAEKAA-EELKKYDPHNDPNVSGDPYKTLFVARLSYETTE 151
ERR + R+++ EKA+ +E YDP DPN +GDPY+TLF++RLS+E TE
Sbjct: 65 DSMQVQFERR---QEDRIKRKEEKASRQETCGYDPKEDPNATGDPYRTLFISRLSFEATE 121
Query: 152 SKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
S +K+EF+ YGPI+++ +V +K T K RGYAFI + +DMKAAYK A+G K+ GRR+LV
Sbjct: 122 SDLKKEFDMYGPIEKLLIVKNKLTGKSRGYAFILFEREKDMKAAYKDAEGLKIKGRRILV 181
Query: 212 DVERGRTVPNWRPRRL 227
DVERGRTV W+PRRL
Sbjct: 182 DVERGRTVKGWKPRRL 197
>gi|326480343|gb|EGE04353.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 406
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 11/194 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
F +GPI+R+R+V D + P RGYAFI Y +DMKAAYK+ DG ++ RR LVDV
Sbjct: 122 FGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVDV 181
Query: 214 ERGRTVPNWRPRRL 227
ERGRTV W+PRR
Sbjct: 182 ERGRTVKGWKPRRF 195
>gi|19114691|ref|NP_593779.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675931|sp|O13829.1|RU17_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein usp101; Short=U1 snRNP protein usp101
gi|2388912|emb|CAB11649.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe]
Length = 261
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 125/190 (65%), Gaps = 9/190 (4%)
Query: 42 LTANLLKLFEPRAPLEYK----PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L A LL LF PR PL Y PPEKR P ++G+A+++ +A+ D Y P E+
Sbjct: 5 LPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLK-YAQSHDQQYHP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R R+ + ++ E+ +K +DP +D +V GDPYKT+F++RLSY+T ES I+RE
Sbjct: 60 LEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIERE 119
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
F YGPI+R+R+V +K T K GYAF+ + RD+K AYK + G L+GRR++VDVERGR
Sbjct: 120 FTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVDVERGR 179
Query: 218 TVPNWRPRRL 227
TV W PR+L
Sbjct: 180 TVKGWLPRKL 189
>gi|388580661|gb|EIM20974.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 324
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 18/199 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-------PGDPLYAP 90
L ANLLKLF PR PL Y P P + K +G+ + + E + +
Sbjct: 5 LPANLLKLFAPRPPLPYAKPLERDPTRSKSNAQSGIGEILHSLKEEQEDRRAKQNGILDE 64
Query: 91 PVEKAETPVERRARIHKLRLEKG------AEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
+E + V + A ++++ + K E L+ Y P D GDP+KTLF+AR
Sbjct: 65 DIESNDLQV-KLAEVYQVAIRKAERQKKRQENFKRALEHYKPTEDIEAIGDPFKTLFIAR 123
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKL 204
LS ETTES +++EFE YGPI+RVR+V K+T K RGYAF+ + RDMKAAYK A+G K+
Sbjct: 124 LSVETTESDLRKEFEVYGPIERVRIVRHKDTGKSRGYAFLIFEKERDMKAAYKDAEGLKI 183
Query: 205 DGRRVLVDVERGRTVPNWR 223
G+R+LVDVERGRTV W+
Sbjct: 184 HGKRILVDVERGRTVKGWK 202
>gi|340959550|gb|EGS20731.1| U1 small nuclear ribonucleoprotein 70 kDa-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 387
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 19/197 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE+RK P+ G+AQ++ AE Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPIDLPPEQRKTAPIGGLAQYLPKIAE-----YEREYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +ERR R + + E + E K Y+PH DPN+ GD +KTL VARLSYE E ++
Sbjct: 60 ESWLERRDRKKREKAEALKKLLEEGPKNYNPHADPNIRGDAFKTLIVARLSYEADEKDLE 119
Query: 156 REFESYGPIKRVRLVTD--------KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
REF +GPI+R+RL+ D K+ RGYAF+ + +DM+AA + DG ++ GR
Sbjct: 120 REFGRFGPIERIRLIRDTHAHEKPNKKIKPHRGYAFVVFEREKDMRAALEGCDGIRIKGR 179
Query: 208 RVLVDVERGRTVPNWRP 224
+ VDVERGRTV W+P
Sbjct: 180 LIKVDVERGRTVKGWKP 196
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 137/270 (50%), Gaps = 40/270 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCP------------PLTGMAQFVSHF----- 80
L +L++LF PR PLEY P P P PLTG+A +
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPLRYDPSPSSAPRSKDPSQPTVRAPLTGVAATLERIKQDAA 64
Query: 81 --AEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE----LKKYDPHNDPNVSG 134
E D + + + + RA + ++ LE A L+ Y P ++ +
Sbjct: 65 DRGESTDDIAQ--LTSSSSYTLSRATLREIELEARRAAKAATKQRGLETYAPASNAAATP 122
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
D YKTLF+ARLSY+ TE + REF+ YGPI+ +RLV D+ K RGYAFI Y RDMKA
Sbjct: 123 DAYKTLFLARLSYDVTEKDLHREFDMYGPIETIRLVRDRN-GKSRGYAFIAYERERDMKA 181
Query: 195 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSR 254
AYK ADG K+ GRRV+VDVERGRTV +W+P RLGGGLG T R ++ EP+
Sbjct: 182 AYKDADGIKIHGRRVMVDVERGRTVKDWKPMRLGGGLGGT--------SRKPKKQPEPAE 233
Query: 255 GPSRSAEPRIREDRHGDRDRERSRERGRDR 284
P + P G R R RG R
Sbjct: 234 TPLLAPAPAFAGG--GFRGTARGGFRGSAR 261
>gi|393904658|gb|EFO18286.2| hypothetical protein LOAG_10208 [Loa loa]
Length = 347
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 156/316 (49%), Gaps = 90/316 (28%)
Query: 45 NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
NLL LFE R PL YKPPP++ RK P ++G+++++ F +P D PP ET E
Sbjct: 8 NLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYIHLFEDPKD---TPPKPVYETKEE 64
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR K + E A K + + + P +P+ + DPYKTLFVAR++YET+ESK++REFE
Sbjct: 65 RRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQ 124
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA-------------------------- 194
+G I R+ LV DK KPRGYAFIEY H M
Sbjct: 125 FGKITRLALVHDKN-GKPRGYAFIEYQHKESMSVTGIFVVVVVCCCKWKGSIRYEWSCLS 183
Query: 195 ----------AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR 244
AYK+ADG K+DGRRV+VD ERGRT +W PRRLGGG G TR
Sbjct: 184 LECTHTSAMEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR--------- 234
Query: 245 YSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH 304
R+RE + +LE++H+ DRDH
Sbjct: 235 ------------------RLRE----------------SKAVLEAAALEMAHE---DRDH 257
Query: 305 RDDRHHRDRDRTRDRE 320
R HR RDRE
Sbjct: 258 RSSSTHRSYSHDRDRE 273
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 18/199 (9%)
Query: 49 LFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHF----AEPGDPLYAPPVEKAETPV 99
LF P P+ + PP +K K L G+++FV F E A +K P
Sbjct: 7 LFTPGPPVSFLPPLDAKRRKKTKHRDLNGISEFVDKFEQEQVEYDAEGQAIRTKKYSMPE 66
Query: 100 ERRARIHK------LRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
RR R +++E K L+ +DP+ND + +P+ TLF+++++YETTE
Sbjct: 67 SRRKRKESRQKDKAIKVENVVRKG---LQDWDPNNDTKATTEPFNTLFISKMNYETTEDT 123
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
++ F +GPIK VR+V D TNK RGYAF+E+ DMK AYK DG ++D RVLVDV
Sbjct: 124 LRNAFGKFGPIKTVRVVRDASTNKSRGYAFVEFEKHEDMKEAYKLGDGMEIDQWRVLVDV 183
Query: 214 ERGRTVPNWRPRRLGGGLG 232
ERGRTV +W+PRRLGGGLG
Sbjct: 184 ERGRTVKDWKPRRLGGGLG 202
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 119/195 (61%), Gaps = 12/195 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K L G+AQ++ E + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPIDRAPEDCKKSTLGGVAQYLPDLKEYEEEY---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + + E + E + +DP NDP GDP+KTLFV+RLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKQEKKENIEKHLTEGIHTFDPSNDPQARGDPFKTLFVSRLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLV----TDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
F +GPI+R+R+V T K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVD
Sbjct: 122 FGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 181
Query: 213 VERGRTVPNWRPRRL 227
VERGRTV W+PRR
Sbjct: 182 VERGRTVKGWKPRRF 196
>gi|378726735|gb|EHY53194.1| U1 small nuclear ribonucleoprotein 70kDa [Exophiala dermatitidis
NIH/UT8656]
Length = 377
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 115/191 (60%), Gaps = 13/191 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKR--KCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L NLL LF+PR PL Y PP PE+R K L+G+A F+ F + P E
Sbjct: 5 LPPNLLALFQPRPPLRYIPPQDAAPEERASKKSELSGIAAFLPQFEQYKQEDVYHPTESW 64
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+R+ K+RL AE E+ Y P +DP + GD KTLFV RLSY+ E+ ++
Sbjct: 65 LQKRDRKLWEKKMRL---AEIQREDFSGYRPQDDPKIKGDAAKTLFVGRLSYDVKEADLE 121
Query: 156 REFESYGPIKRVRLVTDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
REF +GPI+R+R+V D+ T KP RGYAFI + +DM+AAYK+ DG ++ R+V+V
Sbjct: 122 REFGRFGPIERIRIVKDETTPKPKKPHRGYAFIVFEREKDMRAAYKETDGLRIKDRKVVV 181
Query: 212 DVERGRTVPNW 222
DVERGR VP W
Sbjct: 182 DVERGRMVPGW 192
>gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|40739112|gb|EAA58302.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|259480504|tpe|CBF71696.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue;
AFUA_5G13480) [Aspergillus nidulans FGSC A4]
Length = 373
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 120/199 (60%), Gaps = 20/199 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L LL LF+PR PL + P P+ K L+G+AQF+ + + Y P AE
Sbjct: 5 LPPPLLALFQPRPPLRWVTPIDRAPDDIKKSKLSGVAQFLPEVKKTAEETEYNP----AE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ++R+ R + E+ + E L YDP++DP GDP+KTLFV+RLSYE TE ++R
Sbjct: 61 TWLQRKLRQKAEKKEQLHKHLTEGLAAYDPNSDPQARGDPFKTLFVSRLSYEATEQDLER 120
Query: 157 EFESYGPIKRVRLVTDKET----NKP-RGYAFIEYMHTRDMK------AAYKQADGRKLD 205
EF +GPI+R+R+V D T KP RGYAFI Y +DMK AAYK+ DG ++
Sbjct: 121 EFGRFGPIERIRIVKDTVTPKGAKKPHRGYAFIVYEREKDMKDLIHKLAAYKETDGIRIK 180
Query: 206 GRRVLVDVERGRTVPNWRP 224
RRVLVDVERGRTV W+P
Sbjct: 181 DRRVLVDVERGRTVKGWKP 199
>gi|145347107|ref|XP_001418019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578247|gb|ABO96312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 125/214 (58%), Gaps = 9/214 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
L+ +LL++F PRAPL++ PP K +K + G+A V F A KA V
Sbjct: 1 LSPDLLRMFAPRAPLKWCAPPAKPKKTQRMQGVAACVKEFETASKT--ATQKRKAGVYVV 58
Query: 101 RRARIHKLRLEKGAEKAAEELKK-----YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
R AE+ + EL + Y P+ +PN + DPY+TLF+ARL+Y+ E K++
Sbjct: 59 VTKEERAARKRAAAERKSRELIEAGLDGYRPNENPNATSDPYRTLFIARLAYDVDEDKLR 118
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
RE E YG + V+LV D E K RGYAFIE+ DM+AAY+ D R+++ RRV+ DVER
Sbjct: 119 REAEYYGAVSDVKLVRD-EKGKSRGYAFIEFEREGDMRAAYRGMDDRRIEDRRVIADVER 177
Query: 216 GRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
GRT W PRRLGGG+G TR G + N GR+
Sbjct: 178 GRTNKGWLPRRLGGGVGRTRAGSKRENVEARGRD 211
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 12/195 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQF+ + + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEI---PYTPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E ++ E L+ Y+P ND GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKVEKKENINKQLTEGLESYEPSNDQQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLV----TDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
F +GPI+R+R+V T K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVD
Sbjct: 122 FGRFGPIERIRIVKDIVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 181
Query: 213 VERGRTVPNWRPRRL 227
VERGRTV W+PRR
Sbjct: 182 VERGRTVKGWKPRRF 196
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 12/195 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQF+ + + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEI---PYTPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E ++ E L+ Y+P ND GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKVEKKENINKQLTEGLETYEPSNDQQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLV----TDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
F +GPI+R+R+V T K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVD
Sbjct: 122 FGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 181
Query: 213 VERGRTVPNWRPRRL 227
VERGRTV W+PRR
Sbjct: 182 VERGRTVKGWKPRRF 196
>gi|412989201|emb|CCO15792.1| U1 small nuclear ribonucleoprotein 70 kDa [Bathycoccus prasinos]
Length = 643
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK--IKREFESYGPIKRVRLVTDKETN 176
E LK +DPH D +GDPY TLFVARL Y E + ++REFE YG IK +R+V D +T
Sbjct: 221 EALKAWDPHKDEKATGDPYATLFVARLPYAACEDEDVLRREFERYGDIKAIRIVRDTDTG 280
Query: 177 KPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG--TT 234
KP GYAFIE+ DMK A+ +ADG +++G+RV+VD ERGRT PNWRP RLGGGLG T
Sbjct: 281 KPTGYAFIEFETEDDMKRAFARADGTRIEGKRVIVDAERGRTTPNWRPMRLGGGLGGYTK 340
Query: 235 RVGGEEVNQRYSGREQ 250
++ +E+ + G +
Sbjct: 341 QLSKKEIRMKAMGNQS 356
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 26 ANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRK-CPPLTGMAQFVSHF 80
+N+L + HPTGL NLL +F+ R P+++ PP + RK C LTG+ +++ F
Sbjct: 90 SNLLMRPINLNQHPTGLPPNLLVMFKARPPVKWFPPAKARKTCKRLTGIGKYLYLF 145
>gi|320586925|gb|EFW99588.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 428
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 115/196 (58%), Gaps = 15/196 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF PR PL + P P +R+ P++G+AQF+ E D P E
Sbjct: 5 LPPQLLALFAPRPPLRWVQPVDYAPGERQTIPVSGIAQFLPALKEFKDHDGFVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+A HK EK K E + Y P +DPN+ GDP+KTL VARLSYE TE ++RE
Sbjct: 65 RRERKAEEHKAAEEK---KLTEGPRNYKPADDPNIRGDPFKTLIVARLSYEATEQDLERE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F YGPI+R+R++ D + KP RGYAF+ + +DM+AA+ DG ++ RR+
Sbjct: 122 FARYGPIERIRIIKDTHADEKGNKKRKPHRGYAFVVFEREKDMRAAHDACDGIRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPR 225
VDVERGRTV W+P+
Sbjct: 182 KVDVERGRTVKGWKPQ 197
>gi|115399498|ref|XP_001215338.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192221|gb|EAU33921.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 120/195 (61%), Gaps = 12/195 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P P+ K + G+A F+ + + + P ++
Sbjct: 5 LPPPLLALFQPRPPLRYVTPLDRAPDDVKKSTIGGIADFLPEIKKYEEEI---PYNATDS 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ +DP DP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKWREKVEKKERLNKQLTEGLENFDPSKDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRLV----TDKETNKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
F +GPI+R+R+V T K + KP RGYAFI Y +DMKAAYK+ DG ++ RRVLVD
Sbjct: 122 FGRFGPIERIRIVKDNVTPKGSKKPHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVD 181
Query: 213 VERGRTVPNWRPRRL 227
VERGRTV W+PRR
Sbjct: 182 VERGRTVKGWKPRRF 196
>gi|346971277|gb|EGY14729.1| U1 small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 416
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 16/199 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PPP E+R+ P++G+A F+ AE D P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDKDGYVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + HK +LE+ AAE Y P+ DPN+ GD +KTL VARLSYE E ++RE
Sbjct: 65 MKDRKKQEHKAKLER---LAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP---------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
F +G I+R+R++TD ++ RGYAF+ + RDM+AA DG ++ RR
Sbjct: 122 FGRFGNIERIRIITDTHAHEKSKNKKKKPHRGYAFVVFERERDMRAALDSCDGIRIKDRR 181
Query: 209 VLVDVERGRTVPNWRPRRL 227
+ VDVERGRTV W+PRR
Sbjct: 182 IKVDVERGRTVKGWKPRRF 200
>gi|302410869|ref|XP_003003268.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
gi|261358292|gb|EEY20720.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
Length = 413
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 16/199 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PPP E+R+ P++G+A F+ AE D P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDQDGYVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + HK +LE+ AAE Y P+ DPN+ GD +KTL VARLSYE E ++RE
Sbjct: 65 MKDRKKQEHKAKLER---LAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKP---------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
F +G I+R+R++TD ++ RGYAF+ + RDM+AA DG ++ RR
Sbjct: 122 FGRFGNIERIRIITDTHAHEKSKNKKKKPHRGYAFVVFERERDMRAALDSCDGIRIKDRR 181
Query: 209 VLVDVERGRTVPNWRPRRL 227
+ VDVERGRTV W+PRR
Sbjct: 182 IKVDVERGRTVKGWKPRRF 200
>gi|357017377|gb|AET50717.1| hypothetical protein [Eimeria tenella]
Length = 270
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 120/183 (65%), Gaps = 5/183 (2%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PL P + ++ P G+A+++ F E G P P E+P
Sbjct: 4 IGMPPHILALFQAREPLAPLPALKAKQPRPYAGVAEYLKKF-ESGPP---PAASAFESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R+ R+ + +L ++ + + Y P DP + GDP+ TLFV +LSYET+E K++REFE
Sbjct: 60 QRQQRLKRQKLLLHLQQQQRQAEAYRPLEDPRIQGDPFATLFVGKLSYETSEKKLRREFE 119
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
YGP++RVR+V D +PRGYAF+E+ RDMK AYK+ADG K+DGRRVLVDVER RTV
Sbjct: 120 VYGPVRRVRVVRDPR-GRPRGYAFVEFERDRDMKEAYKKADGTKIDGRRVLVDVERARTV 178
Query: 220 PNW 222
P W
Sbjct: 179 PGW 181
>gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56492466|emb|CAH97184.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 319
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
E+ K+YDP + ++S D KTLF+ RLSYE E K+K+EFE+YG IK V+++ D++ KP
Sbjct: 28 EKKKEYDPFKNNDISSDLKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKVIYDQDK-KP 86
Query: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RGYAFIE+ HT+ + AY ADG+K+D RR+LVD+ER RTV NW RRLGGG G +R
Sbjct: 87 RGYAFIEFEHTKSVTDAYNLADGKKIDNRRILVDMERARTVKNWILRRLGGGKGPSR 143
>gi|116207864|ref|XP_001229741.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
gi|88183822|gb|EAQ91290.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
Length = 387
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE RK ++G+AQF+ AE Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHAPELRKTAAVSGVAQFLPALAE-----YEREYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +E R R + +L++ E E K Y PH+DPN+ GD +KTL VARL Y E ++
Sbjct: 60 ESWLEARDRKKREKLQQVEEAVTEGPKNYSPHDDPNIRGDAFKTLIVARLDYSADEKDLE 119
Query: 156 REFESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
REF +GPI+R+R++ D + KP RGY F+ + +DM+AA DG ++ R
Sbjct: 120 REFGRFGPIERIRIIRDTHAHEKGNKKKKPHRGYGFVVFEREKDMRAALDGCDGIRIKDR 179
Query: 208 RVLVDVERGRTVPNWRP 224
R+ VDVERGRTV W+P
Sbjct: 180 RIKVDVERGRTVKGWKP 196
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 123/202 (60%), Gaps = 17/202 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPG-DPLYAPP----- 91
L NLLKLF PR PL Y P +K + ++G+A+ + E D L+
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVDKDIDRIRKKNVSGVAEILQRLKEENTDSLFNAANNDEQ 66
Query: 92 VEKAETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARL 145
+E+ E PV A K +R E+ + AEE +K Y P +DP GDPYKTLF+ARL
Sbjct: 67 MEEGEEPVFTHAEEVKRQIRREERKARKAEEFRKAKESYKPADDPEAIGDPYKTLFIARL 126
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205
TE+ ++REFE YG I+RVR+V DK + RGYAFI Y RDMKAAYK++DG +
Sbjct: 127 HKSATETDLRREFEGYGTIERVRIVRDK-NGRSRGYAFIVYERERDMKAAYKESDGLHIM 185
Query: 206 GRRVLVDVERGRTVPNWRPRRL 227
G+R+LVDVERGRTV W+PRRL
Sbjct: 186 GKRILVDVERGRTVRGWKPRRL 207
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 62 PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEEL 121
P++RK +TG+ F+ E Y P + ETPV ++ R + + +K E+
Sbjct: 6 PKERKTAFITGIGSFLDKLKEYKQIDY-PKEQFEETPVLKQQREKREKQLLNKQKLDEDF 64
Query: 122 KKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGY 181
K++P DP++ GDPYKTLFV RL+YE TE +++EF YG ++RVR+V DK+T+K +GY
Sbjct: 65 AKWNPSEDPHIKGDPYKTLFVGRLNYEVTEIDLQKEFSKYGEVERVRVVRDKDTSKSKGY 124
Query: 182 AFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
AFI + H KAAYK+A+G K+ GR ++ D+ER RT +W PRRL
Sbjct: 125 AFILFDHDSSAKAAYKEANGLKIKGRAIITDIERSRTFKSWVPRRL 170
>gi|260805174|ref|XP_002597462.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
gi|229282727|gb|EEN53474.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
Length = 173
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 100/160 (62%), Gaps = 8/160 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC-----PPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP +K C P G+ + F +P D PP +AE
Sbjct: 5 LPPNLLALFAPREPIPYLPPTDKLPCEKIRRAPYAGVTPHLQTFEDPKD---TPPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R K +LE A + E++ ++DP ND N SGD YKTLFVAR++Y+T+ESK++R
Sbjct: 62 TRQERLERKRKEKLEAHANRLEEKVSEWDPANDANASGDAYKTLFVARINYDTSESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
EFE YGPI+ +++ D T KPRGYAFIEY H RDM Y
Sbjct: 122 EFEVYGPIRSIKMTKDVNTGKPRGYAFIEYEHERDMHCKY 161
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 121/199 (60%), Gaps = 21/199 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPG-DPLY----APPV 92
L NLLKLF PR PL Y P +K + + G+AQ ++ E D L A +
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVDKDIDRIRTKHVNGVAQILAQLKEANTDSLISSGTAEAM 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELK----KYDPHNDPNVSGDPYKTLFVARLSYE 148
E+ E P++ +R E+ K EE K Y P +DP GDPYKTLF++RL
Sbjct: 67 EEGEEPLQ-------IRREERKAKKTEEFKLAKSSYKPADDPEAVGDPYKTLFISRLHKT 119
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
TE+ ++REFE YG I+RVR+V DK+ + RGYAF+ Y RDMKAAYK++DG + G+R
Sbjct: 120 ATETDLRREFEGYGTIERVRIVRDKK-GRSRGYAFVVYERERDMKAAYKESDGLHIMGKR 178
Query: 209 VLVDVERGRTVPNWRPRRL 227
+LVDVERGRTV W+PRRL
Sbjct: 179 ILVDVERGRTVRGWKPRRL 197
>gi|451851627|gb|EMD64925.1| hypothetical protein COCSADRAFT_25892 [Cochliobolus sativus ND90Pr]
Length = 387
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+AQ++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RLSY T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGITSDDLER 120
Query: 157 EFESYGPIKRVRLV---TDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
EF YGPI+R+R+V T E P RGYAFI + +DMKAAYK+ DG K+ RRV
Sbjct: 121 EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 210 LVDVERGRTVPNW 222
LVDVERGRTV W
Sbjct: 181 LVDVERGRTVSGW 193
>gi|224004248|ref|XP_002295775.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
gi|209585807|gb|ACI64492.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
Length = 174
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 11/172 (6%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAE-TPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
L+G++ F++HF PP K TP R K + K A ++ Y
Sbjct: 8 LSGVSSFLNHFERT-----TPPQRKINPTPKSLRETKRKTAAVENEGKLAPLIEAYRAEQ 62
Query: 129 DPN----VSG-DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+ +G + Y TLFV RL+YE TE K+ RE ESYGP+K ++L+TD +T K RGYAF
Sbjct: 63 SSSGGEFTNGMNCYNTLFVGRLAYEVTERKLLREMESYGPVKDLKLITDCKTGKSRGYAF 122
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
+EY DMK A++ ADG +L+GR ++VDVERG TVPNW PR+ GGGLG TR
Sbjct: 123 VEYEKEDDMKRAFRAADGMRLEGRAIVVDVERGHTVPNWLPRKFGGGLGGTR 174
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 22/195 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL + PP P R+ + G+AQFV P VE+A+T
Sbjct: 5 LPHNLLALFQPRPPLRFMPPADFAPGDRRTHRIDGVAQFV--------PALKQKVEEAKT 56
Query: 98 PVERRARIHK---LRLEKGAEK--AAEELKK--YDPHNDPNVSGDPYKTLFVARLSYETT 150
+ K + +EK A++ EE K Y P D N+ GD +KTLFV RL Y+ T
Sbjct: 57 ETITECGLQKRDRMMIEKQAKQKWLLEEGHKEMYKPGEDENIRGDAFKTLFVGRLPYDCT 116
Query: 151 ESKIKREFESYGPIKRVRLVTD---KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
+++EF +GPI+RVR+VTD K KPRGYAFI + +DMKAAYK+ + ++ GR
Sbjct: 117 TKDLEKEFGRFGPIERVRIVTDRSEKAKGKPRGYAFILFEREKDMKAAYKECERLQIRGR 176
Query: 208 RVLVDVERGRTVPNW 222
VLVDVERGRTV W
Sbjct: 177 MVLVDVERGRTVTGW 191
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 116/186 (62%), Gaps = 4/186 (2%)
Query: 46 LLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE----PGDPLYAPPVEKAETPVER 101
+++LF PR PL Y PPP+KRK PL G+A + ++ P + E ETP R
Sbjct: 23 VMELFRPREPLPYIPPPKKRKLRPLVGVAPLLDQISQYKQQVNRPRWEENGETFETPAMR 82
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
R R K + EK + + ++Y P ++PN + D KTLF+ARL ETT+ K++ E E++
Sbjct: 83 RERKRKEKREKFLQWKQKLWEQYSPPSEPNATSDAQKTLFIARLKPETTQLKLQAELEAF 142
Query: 162 GPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 221
G +K ++L ++T P+GYAF+E+ RDM+ A + +G+++DG RV+VDVE+ RT N
Sbjct: 143 GKVKEIKLPISQKTGLPKGYAFVEFQKERDMREALRALEGKRIDGARVIVDVEKARTTKN 202
Query: 222 WRPRRL 227
W P++L
Sbjct: 203 WLPKKL 208
>gi|70997103|ref|XP_753306.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|66850942|gb|EAL91268.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|159126968|gb|EDP52084.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
A1163]
Length = 395
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 116/205 (56%), Gaps = 25/205 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y PP P+ K + G+A F+ + G+ + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVPPVDRAPDDIKKSSIGGVADFLGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ YDP NDP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WLQRKWRQKLEKKERLNKQLTEGLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRVRL----VTDKETNKP-RGYAFIEYMHTRDMKAA-----YKQADGRKLDG- 206
F +GPI+R+R+ VT K + KP RGYAFI Y +DMK Y + LD
Sbjct: 122 FGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYEREKDMKGIAATHNYSENSATPLDPK 181
Query: 207 -------RRVLVDVERGRTVPNWRP 224
RRVLVDVERGRTV W+P
Sbjct: 182 NGIRIKDRRVLVDVERGRTVKGWKP 206
>gi|367027924|ref|XP_003663246.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
gi|347010515|gb|AEO58001.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
Length = 313
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 15/195 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP PE+R+ ++G+AQ++ AE + +Y E+
Sbjct: 5 LPPNLLALFAPRPPLRWVPPCDHPPEERRTASISGVAQYLPAMAE-YERVYE--YHPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+ERR R + + E+ E K Y+PH DPN+ GD +KTL VARL Y E ++RE
Sbjct: 62 WLERRDRKKREKQEQVERLLTEGPKNYNPHADPNIRGDAFKTLIVARLDYNADEKDLERE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +GPI+R+R++ D + KP RGY F+ + +DM+AA + DG ++ RR+
Sbjct: 122 FGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALEGCDGIRIKDRRI 181
Query: 210 LVDVERGRTVPNWRP 224
VDVERGRTV W+P
Sbjct: 182 KVDVERGRTVKGWKP 196
>gi|451995589|gb|EMD88057.1| hypothetical protein COCHEDRAFT_1070524, partial [Cochliobolus
heterostrophus C5]
Length = 247
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+AQ++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RLSY T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGVTSDDLER 120
Query: 157 EFESYGPIKRVRLV---TDKETNKP----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
EF YGPI+R+R+V T E P RGYAFI + +DMKAAYK+ DG K+ RRV
Sbjct: 121 EFGRYGPIERIRIVEDITQPEDAPPKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 210 LVDVERGRTVPNW 222
LVDVERGRTV W
Sbjct: 181 LVDVERGRTVSGW 193
>gi|330931076|ref|XP_003303260.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
gi|311320862|gb|EFQ88659.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
Length = 402
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRVRLVTD--KETNKP-----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
EF YGPI+R+R+V D + + P RGYAFI + +DMKAAYK+ DG K+ RRV
Sbjct: 121 EFGRYGPIERIRIVEDVTQPADAPLKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 210 LVDVERGRTVPNW 222
LVDVERGRTV W
Sbjct: 181 LVDVERGRTVSGW 193
>gi|322702160|gb|EFY93908.1| U1 small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 388
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 17/196 (8%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + +PP PEKRK P+ G+A F+ + + +Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPIDGVAAFLPELQKYKETDVYNP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E + E K Y P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEARDRKKQEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRVRLVTDKETN-KP-------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
EF +GPI+R+R++TD + KP RGYAF+ + +D++AA DG ++ RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPNKKKKAHRGYAFVVFEREKDLRAALDSCDGIRIKDRR 180
Query: 209 VLVDVERGRTVPNWRP 224
+ VDVERGRTV W+P
Sbjct: 181 IKVDVERGRTVKGWKP 196
>gi|367049672|ref|XP_003655215.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
gi|347002479|gb|AEO68879.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE+R+ ++G+AQ++ A Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPVDHPPEERRTAAISGVAQYLPALAA-----YEHEYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +ERR R + + + + E KKY+PH DPN+ GD +KTL VARL Y E ++
Sbjct: 60 ESWLERRDRKKREKQAEVEKLLTEGPKKYNPHEDPNIRGDAFKTLIVARLDYNADEKDLE 119
Query: 156 REFESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
REF +GPI+R+R++ D + KP RGY F+ + +DM+AA DG ++ R
Sbjct: 120 REFGRFGPIERIRIIRDTHAHEKGNKKQKPHRGYGFVVFEREKDMRAALDGCDGIRIKDR 179
Query: 208 RVLVDVERGRTVPNWRP 224
R+ VDVERGRTV W+P
Sbjct: 180 RIKVDVERGRTVKGWKP 196
>gi|396477011|ref|XP_003840172.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
gi|312216743|emb|CBX96693.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
Length = 398
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 112/194 (57%), Gaps = 18/194 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P ++G+ Q++ + D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKISGVGQYLQAMRDYKDQDNYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E ++ Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLTEGIQNYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRVRLVTDKETNKP--------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
EF YGPI+R+R+V D T P RGYAFI Y +DMKAAYK+ DG K+ RR
Sbjct: 121 EFGRYGPIERIRIVEDI-TAPPDAPPKKRKRGYAFIVYEREKDMKAAYKETDGIKIKDRR 179
Query: 209 VLVDVERGRTVPNW 222
VLVDVERGRTV W
Sbjct: 180 VLVDVERGRTVTGW 193
>gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens]
Length = 216
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 55 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 111
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 112 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 171
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM + + A
Sbjct: 172 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSTTQLA 214
>gi|30802167|gb|AAH51414.1| Snrnp70 protein [Mus musculus]
Length = 186
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 106/165 (64%), Gaps = 12/165 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 3 LPPNLLALFAPRDPIPYLPPLEKL--PHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 57
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 58 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 117
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+REFE YGPIKR+ +V K + KPRGYAFIEY H RDM Y +
Sbjct: 118 RREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHCEYCAS 162
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 14/199 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHF-AEPGDPLYAP--PVEK 94
L NLLKLF PR PL Y P ++ + + G+ ++ E + L+ +E+
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDAMEE 66
Query: 95 AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYE 148
E PV A K LR E+ + EE KK Y P +D GDPYKTLF++RL
Sbjct: 67 GEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTLFISRLHKS 126
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
TE+ ++REFE YG I+RVR+V DK+ N+ RGYAFI Y RDMKAAYK++DG + G++
Sbjct: 127 ATETDLRREFEGYGTIERVRIVRDKK-NRSRGYAFIVYERERDMKAAYKESDGLHIMGKK 185
Query: 209 VLVDVERGRTVPNWRPRRL 227
+LVDVERGRTV W+PRRL
Sbjct: 186 ILVDVERGRTVRGWKPRRL 204
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 14/199 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHF-AEPGDPLYAP--PVEK 94
L NLLKLF PR PL Y P ++ + + G+ ++ E + L+ +E+
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDAMEE 66
Query: 95 AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYE 148
E PV A K LR E+ + EE KK Y P +D GDPYKTLF++RL
Sbjct: 67 GEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTLFISRLHKS 126
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
TE+ ++REFE YG I+RVR+V DK+ N+ RGYAFI Y RDMKAAYK++DG + G++
Sbjct: 127 ATETDLRREFEGYGTIERVRIVRDKK-NRSRGYAFIVYERERDMKAAYKESDGLHIMGKK 185
Query: 209 VLVDVERGRTVPNWRPRRL 227
+LVDVERGRTV W+PRRL
Sbjct: 186 ILVDVERGRTVRGWKPRRL 204
>gi|347826795|emb|CCD42492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 436
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 23/202 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L NLL LF PR PL + PP PE RK ++G+A F+ E + Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDDYQP----TE 60
Query: 97 TPVERRARIHKLRLEKGA--EKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESK 153
+ ++R+ R+ +LEK A E +E K + P DPN+ GD +KTL V+RL Y+ TE
Sbjct: 61 SWLQRKDRV---KLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATEKD 117
Query: 154 IKREFESYGPIKRVRLVTD--------KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205
++REF +GPI+R+R+V D K+ K RGYAF+ + +DM+A + DG ++
Sbjct: 118 LEREFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRAGLENCDGIRIK 177
Query: 206 GRRVLVDVERGRTVPNWRPRRL 227
RR+ VDVERGRTV W PRRL
Sbjct: 178 DRRIKVDVERGRTVKGWLPRRL 199
>gi|157816921|ref|NP_001101953.1| U1 small nuclear ribonucleoprotein 70 kDa [Rattus norvegicus]
gi|337443|gb|AAA36571.1| ribonucleoprotein antigen [Homo sapiens]
gi|26346286|dbj|BAC36794.1| unnamed protein product [Mus musculus]
gi|29165791|gb|AAH49128.1| Snrnp70 protein [Mus musculus]
gi|119572834|gb|EAW52449.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_d [Homo sapiens]
gi|148690899|gb|EDL22846.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690900|gb|EDL22847.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690902|gb|EDL22849.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|149055930|gb|EDM07361.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055932|gb|EDM07363.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055935|gb|EDM07366.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|193788471|dbj|BAG53365.1| unnamed protein product [Homo sapiens]
gi|417396419|gb|JAA45243.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Desmodus rotundus]
Length = 166
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 107/165 (64%), Gaps = 12/165 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+REFE YGPIKR+ +V K + KPRGYAFIEY H RDM + + A
Sbjct: 120 RREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSTTQLA 164
>gi|149055931|gb|EDM07362.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 167
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 8/166 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGR 202
EFE YGPIKR+ +V K + KPRGYAFIEY H RDM + + R
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSTTQAGRAR 167
>gi|189199498|ref|XP_001936086.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983185|gb|EDU48673.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 408
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 16/193 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRVRLVTD--KETNKP-----RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
EF YGPI+R+R+V D + + P RGYAFI + +DMKAAYK+ DG K+ RRV
Sbjct: 121 EFGRYGPIERIRIVEDVTQPADAPLKKRKRGYAFIVFEREKDMKAAYKETDGIKIKDRRV 180
Query: 210 LVDVERGRTVPNW 222
LVDVERGRTV W
Sbjct: 181 LVDVERGRTVSGW 193
>gi|358377877|gb|EHK15560.1| hypothetical protein TRIVIDRAFT_232656 [Trichoderma virens Gv29-8]
Length = 410
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 17/198 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF R PL + P PEKR+ P+ G+A F+ + + Y P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGLAAFLPELQKYKETDAYQP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E + E K++ P+ DPN+ GD +KTL VARLSYE E ++R
Sbjct: 61 SWLEMRDRKKQEKTEAASNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYEADERDLER 120
Query: 157 EFESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
EF +GPI+R+R++ D + KP RGYAF+ + +DM+AA DG ++ RR
Sbjct: 121 EFGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRR 180
Query: 209 VLVDVERGRTVPNWRPRR 226
+ VDVERGRT NW PRR
Sbjct: 181 IKVDVERGRTAKNWLPRR 198
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 121/197 (61%), Gaps = 12/197 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHF-AEPGDPLYAPPVEKAE 96
L NLLKLF PR PL Y+ P ++ R P + G+ + + E + +E+ E
Sbjct: 7 LPPNLLKLFAPRPPLPYQRPLDRDIDRVRPKNVHGVGEILQRLRVEEASKPHDENMEEGE 66
Query: 97 TPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYETT 150
P A K +R E+ +K E+ ++ Y P +DP GDPYKTLF++RL T
Sbjct: 67 EPNFTLAEEVKRQIRREERKKKKTEDFQRAKDTYKPADDPEAVGDPYKTLFISRLHKNAT 126
Query: 151 ESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
ES ++REFESYG I+RVR+V DK+ + RGYAFI Y RDMK AYK++DG + G+R+L
Sbjct: 127 ESDLRREFESYGMIERVRIVRDKQ-GRSRGYAFIVYERERDMKTAYKESDGLVILGKRIL 185
Query: 211 VDVERGRTVPNWRPRRL 227
VDVERGRTV W+PRRL
Sbjct: 186 VDVERGRTVRGWKPRRL 202
>gi|310789384|gb|EFQ24917.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 406
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 23/199 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQF---VSHFAEPGDPLYAPPVEK 94
L NLL LF PR PL + PP PE R+ P++G+A+F + ++ E + Y P
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPESRRTLPVSGVAEFLPALQNYKETDE--YKP---- 58
Query: 95 AETPVERRARIHKLRLEKGAEKA-AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
E+ ++ R R KL + E+ E K + PH DPN+ GD +KTL VARLSYE E
Sbjct: 59 TESWLQMRDR-KKLEKQAAVERLKTEGPKNFKPHEDPNIRGDAFKTLIVARLSYEANEQD 117
Query: 154 IKREFESYGPIKRVRLVTDKET--------NKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205
++REF +GPI+R+R++TD RGYAF+ + +DM+AA DG ++
Sbjct: 118 LEREFGRFGPIERIRIITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDACDGIRIK 177
Query: 206 GRRVLVDVERGRTVPNWRP 224
RR+ VDVERGRTV W P
Sbjct: 178 DRRIKVDVERGRTVKGWVP 196
>gi|322707331|gb|EFY98910.1| U1 small nuclear ribonucleoprotein [Metarhizium anisopliae ARSEF
23]
Length = 392
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + +PP PEKRK P+ G+A + + + +Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPINGVAALLPELQKYKETDVYNP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E + R + E + E K Y P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEAKDRKKHEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRVRLVTDKETN-KP-------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
EF +GPI+R+R++TD + KP RGYAF+ + +DM+AA DG ++ RR
Sbjct: 121 EFGRFGPIERIRIITDTHAHEKPNKKKKAHRGYAFVVFEREKDMRAALDSCDGIRIKDRR 180
Query: 209 VLVDVERGRTVPNWRPRRL 227
+ VDVERGRTV W+PRRL
Sbjct: 181 IKVDVERGRTVKGWKPRRL 199
>gi|443916274|gb|ELU37399.1| U1 snRNP 70K protein [Rhizoctonia solani AG-1 IA]
Length = 250
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 124/238 (52%), Gaps = 60/238 (25%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL + P+K + ++G+A ++ E E+
Sbjct: 5 LPPNLLKLFAPRPPLPFVRSVGKDPDKVRSKKVSGVAALLAEIREAN--------ERGIV 56
Query: 98 PVERRARIHKLRLEKGAEKA--AEELKK---------------------YDPHNDPNVSG 134
+ R R E+G EK AEE+K+ Y P +DP +G
Sbjct: 57 EADDRDR------EEGEEKFTYAEEIKRGIYREQRQKRKKEEFQKAKETYKPADDPEATG 110
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMK- 193
DPYKTLF++RLS TE +++EF +YG I+R+RLV +K RGYAFI Y +DMK
Sbjct: 111 DPYKTLFISRLSKNATEDDLRKEFGTYGRIERIRLVRNKR-GVSRGYAFIVYDREKDMKG 169
Query: 194 -----------------AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 234
AAYK+ADG + G+R+LVDVERGRTV W+PRRLGGGLG +
Sbjct: 170 ILIPCHAPTWKLNSVPTAAYKEADGISILGKRILVDVERGRTVRGWKPRRLGGGLGAS 227
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 83/115 (72%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FVARL+Y+TTESKIKRE +++G I + +V + T KPRGY F+E+ H RDM AA K
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKAL 60
Query: 200 DGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSR 254
+GRK+DG RV+ DVERGRT P+WRPRRLG GLG R G + + R +EPSR
Sbjct: 61 NGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNRQGPSDKSHRKHENGREPSR 115
>gi|90076320|dbj|BAE87840.1| unnamed protein product [Macaca fascicularis]
Length = 344
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 100/152 (65%), Gaps = 8/152 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMH 188
EFE YGPIKR+ +V K + KPRGYAFIEY H
Sbjct: 122 EFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEH 153
>gi|443704417|gb|ELU01479.1| hypothetical protein CAPTEDRAFT_111454 [Capitella teleta]
Length = 194
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 7/155 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPP----LTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y P +K + G+AQ++S F +P D PP + ET
Sbjct: 5 LPQNLLGLFAPRDPIPYLVPTDKLRSEKKEFRYAGVAQYLSEFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R K RLE+ A K ++L +DP NDP+V+GDP+KTLFVAR++Y+++ESK++RE
Sbjct: 62 KEERKERKKKERLEQVAYKLEQDLALWDPANDPSVTGDPFKTLFVARVNYDSSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM 192
FE++GP++R+ LVT+++T KPRGYAFIE+ H RDM
Sbjct: 122 FEAHGPVRRISLVTNRKTGKPRGYAFIEFEHERDM 156
>gi|429857182|gb|ELA32061.1| u1 small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 401
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 115/200 (57%), Gaps = 19/200 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHF-AEPGDPLYAPPVEKAE 96
L NLL LF PR PL + PPP EKRK P++G+A+F+ A Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEKRKTLPVSGVAEFLPALQAYKETDEYKP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKA-AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++ R R KL + EK E K + PH D N+ GD +KTL VARLSYE E ++
Sbjct: 61 SWLQMRDR-KKLEKQAAVEKLKTEGPKNFKPHEDSNIRGDAFKTLIVARLSYEANEQDLE 119
Query: 156 REFESYGPIKRVRLVTDKETNKPR--------GYAFIEYMHTRDMKAAYKQADGRKLDGR 207
REF +GPI+R+R++TD ++ GYAF+ + +DM+AA DG ++ R
Sbjct: 120 REFGRFGPIERIRIITDTHAHEKPRKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDR 179
Query: 208 RVLVDVERGRTVPNWRPRRL 227
R+ VDVERGRTV W PRRL
Sbjct: 180 RIKVDVERGRTVKGWVPRRL 199
>gi|358391969|gb|EHK41373.1| hypothetical protein TRIATDRAFT_176911, partial [Trichoderma
atroviride IMI 206040]
Length = 392
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 110/197 (55%), Gaps = 15/197 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P PEKR+ P+ G+A F+ + + E E+
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGVAAFLPELQKYKE---TDKYEPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E R R + E E K++ P+ DPN+ GD +KTL VARLSY+ E ++RE
Sbjct: 62 WLEMRDRKKRETQENATNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYDAEERDLERE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +GPI+R+R++ D + KP RGYAF+ + +DM+AA DG ++ RR+
Sbjct: 122 FGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPRR 226
VDVERGRT NW PRR
Sbjct: 182 KVDVERGRTAKNWLPRR 198
>gi|402078981|gb|EJT74246.1| hypothetical protein GGTG_08089 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 400
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 111/198 (56%), Gaps = 15/198 (7%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P PP++R+ + G+A F + E D +E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPHIDAPPDQRRATTIDGVAGFKAALQEYKD---KDGYVASES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RR R E+ A E KY P DPN+ GD +KTL VARLSYE E I++E
Sbjct: 62 WLQRRDRKKAEHTEEVARHLKEGPAKYKPLEDPNIRGDAFKTLIVARLSYEADERDIEKE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +G I+R+R++ D + KP RGYAF+ + +DM+AA DG ++ RRV
Sbjct: 122 FGRFGTIERIRIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALDGCDGIRIKDRRV 181
Query: 210 LVDVERGRTVPNWRPRRL 227
VDVERGRTV W+P RL
Sbjct: 182 KVDVERGRTVEGWKPLRL 199
>gi|440639828|gb|ELR09747.1| hypothetical protein GMDG_04233 [Geomyces destructans 20631-21]
Length = 489
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 118/205 (57%), Gaps = 29/205 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPP--VEKA 95
L NLL LF PR L + PP P+ RK ++G+A F+ E Y E
Sbjct: 46 LPPNLLALFAPRPGLRWVPPSDHAPQDRKTATISGLAAFLPALEE-----YKATDKYEPT 100
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKK-----YDPHNDPNVSGDPYKTLFVARLSYETT 150
E+ ++R+ R LRLEK +A E+L K Y P D N+ GD +KTL VARLSY+ T
Sbjct: 101 ESWLQRKDR---LRLEK--REAQEQLLKEGPADYKPQEDQNIRGDAFKTLIVARLSYDAT 155
Query: 151 ESKIKREFESYGPIKRVRLVTDK-ETNKP-------RGYAFIEYMHTRDMKAAYKQADGR 202
E ++REF +GPI+R+R+VTD + KP RGYAF+ + +DM+AA DG
Sbjct: 156 EQDLEREFGRFGPIERIRIVTDTHQDEKPNKKKKKHRGYAFVVFEREKDMRAALDGCDGI 215
Query: 203 KLDGRRVLVDVERGRTVPNWRPRRL 227
++ RR+ VDVERGRTV W+PRR
Sbjct: 216 RIKERRIKVDVERGRTVKGWKPRRF 240
>gi|340518330|gb|EGR48571.1| predicted protein [Trichoderma reesei QM6a]
Length = 240
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF R PL + P PEKR+ P+ G+A F+ + + +Y P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDYAPEKRRTAPIGGVAAFLPELQKYKETDVYEP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E E KK+ P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEMRDRKKREKAEAAERLKIEGPKKFKPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
EF +GPI+RVR++T ++ RGYAF+ + +DM+AA DG ++ RR+ VDVERG
Sbjct: 121 EFGRFGPIERVRVMTHRKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRRIKVDVERG 180
Query: 217 RTVPNWRPRR 226
RT NW PRR
Sbjct: 181 RTAKNWLPRR 190
>gi|225677479|gb|EEH15763.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 386
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 32/187 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
F +GPI+R AAYK+ DG ++ RRVLVDVERGR
Sbjct: 122 FGRFGPIER-------------------------SSAAYKETDGIRIKDRRVLVDVERGR 156
Query: 218 TVPNWRP 224
TV W+P
Sbjct: 157 TVKGWKP 163
>gi|219112155|ref|XP_002177829.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410714|gb|EEC50643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 5/180 (2%)
Query: 50 FEPRAPLEYKPPPEKRKCPPLTGMAQFVSHF-AEPGDPLYAPPVEKAETPVERRARIHKL 108
F P PL + PP + R+ P+TG++ +SHF E + + P + + ERR + +
Sbjct: 11 FMPNPPLLHIPPVQHRRKHPITGVSGLLSHFEKETSERVLQPTPQILK---ERRKALKQE 67
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESKIKREFESYGPIKRV 167
+ +K E E +K + G + Y TLF+ RL+YE TE K+ RE ES+GP+K +
Sbjct: 68 KHQKELEPLIETYRKEQKESGGEHKGMNCYNTLFIGRLAYEVTERKLLREMESFGPVKDI 127
Query: 168 RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
R++ D + K RGYAF+EY H DMK AY+ ADG +++GR ++VDVERG TVP+W PRRL
Sbjct: 128 RIIKDSKEGKSRGYAFVEYEHEEDMKRAYRAADGIRIEGREIVVDVERGHTVPSWLPRRL 187
>gi|255553987|ref|XP_002518034.1| RNA binding protein, putative [Ricinus communis]
gi|223543016|gb|EEF44552.1| RNA binding protein, putative [Ricinus communis]
Length = 216
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 61/68 (89%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAV+ TK QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKP
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCP 68
PP + K P
Sbjct: 61 PPREEKVP 68
>gi|427781317|gb|JAA56110.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Rhipicephalus pulchellus]
Length = 201
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 112/177 (63%), Gaps = 7/177 (3%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
FE +GPIK++ +V +K T KPRGYAF+EY H RDM Y A L VL+ +E
Sbjct: 122 FEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHCEYLWAITPFLICLDVLLFIE 178
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
Query: 43 TANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEK 94
T ++ LF P+ PL+Y PP EKR+ P + G+AQF+S H E D K
Sbjct: 7 TPLIVDLFTPKVPLQYLPPADVPIEKRRTPKVDGIAQFLSSLKEHVEEYKD-------YK 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
E V R A+ KL+ ++ + L K++P D N++GDPYKT+FV RL Y E ++
Sbjct: 60 NEF-VSREAK-AKLKSQQNKDALQRALLKWNPETDTNIAGDPYKTVFVGRLDYTVNEIEL 117
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+ +F +G I ++R+V D T K RGYAFI Y D K A+++ + + R V+VD+E
Sbjct: 118 REKFAQFGEIDQIRVVRDTNTGKSRGYAFILYKSESDAKLAFQKGNRMVIKDRAVIVDIE 177
Query: 215 RGRTVPNWRPRR 226
RGR V NW+PRR
Sbjct: 178 RGRVVKNWKPRR 189
>gi|406866559|gb|EKD19599.1| U1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 408
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 111/204 (54%), Gaps = 27/204 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP E RK ++G+A F+ E +K +
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHASEDRKTAYISGLASFLPQLEE---------YKKTDV 55
Query: 98 PVERRARIHKLRLEKGAEKAAEEL------KKYDPHNDPNVSGDPYKTLFVARLSYETTE 151
V + + K K ++AA+E Y P DPN+ GD +KTL VARLSY+ T+
Sbjct: 56 YVPTESWLQKKDRIKAEKRAAQEALTKNGPATYKPDEDPNIRGDAFKTLIVARLSYDATD 115
Query: 152 SKIKREFESYGPIKRVRLVTD--------KETNKPRGYAFIEYMHTRDMKAAYKQADGRK 203
I+REF +GPI+R+R+V D K+ RGYAF+ + +DM+AA + DG +
Sbjct: 116 QDIEREFSRFGPIERIRIVVDTHQDEKPNKKKKNHRGYAFVVFEREKDMRAALENCDGIR 175
Query: 204 LDGRRVLVDVERGRTVPNWRPRRL 227
+ RR+ VDV+R +TV W PRRL
Sbjct: 176 IKDRRIKVDVQRAKTVRGWLPRRL 199
>gi|118356855|ref|XP_001011681.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila]
gi|89293448|gb|EAR91436.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila
SB210]
Length = 302
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 4/161 (2%)
Query: 72 GMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPN 131
GM ++ E G P+ P+EK ETP E+ R K + EK +K +E++ ++P +D
Sbjct: 130 GMWDYILQKFERGPPV---PLEKFETPEEKMIREKKEKKEKLKQKIRDEMQSWNPFDDQK 186
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRD 191
+ DPYKTL + +SY ESK+K F+ YGPIK R++ + + K RGY FIE+ D
Sbjct: 187 QTSDPYKTLLIFNISYNVNESKLKEHFKVYGPIKSCRIIRN-QNQKHRGYGFIEFERKND 245
Query: 192 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
+AYK A +K+DGRR+ VD+ERGRT+ ++RPRR GGGLG
Sbjct: 246 FISAYKNAHEKKIDGRRIGVDIERGRTILSFRPRRFGGGLG 286
>gi|361128631|gb|EHL00561.1| putative U1 small nuclear ribonucleoprotein 70 kDa like protein
[Glarea lozoyensis 74030]
Length = 421
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 117/200 (58%), Gaps = 19/200 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L NLL LF PR L + P P +RK P ++G+A F+ E + Y P E
Sbjct: 5 LPPNLLALFAPRPALRWVAPSDHAPAERKTPNISGIAAFLPQLQEYKETDDYKP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEE-LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++R+ R+ K+ ++ EK +E Y P DPN+ GD +KTL VARLSYE TE ++
Sbjct: 61 SWLQRKDRL-KMEKKQHQEKLLKEGPTGYKPSEDPNIRGDAFKTLIVARLSYEATEQDLE 119
Query: 156 REFESYGPIKRVRLVTDK-ETNKP-------RGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
EF YG I+R+R+V D + KP RGYAF+ + +DM+AA + DG ++ R
Sbjct: 120 SEFGRYGAIERIRIVVDTHQDEKPNKKKKKHRGYAFVVFEREKDMRAALENCDGIRIKDR 179
Query: 208 RVLVDVERGRTVPNWRPRRL 227
R+ VDVERGRTV +W+PRR
Sbjct: 180 RIKVDVERGRTVRDWKPRRF 199
>gi|340502463|gb|EGR29151.1| u1 small nuclear ribonucleoprotein 70 kda, putative
[Ichthyophthirius multifiliis]
Length = 464
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 90 PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYET 149
PP+ K ETP E+ R + + +K + + L +++P D ++ DPYKTL + +SY
Sbjct: 159 PPLAKVETPREKIKREKQEKRQKQKQLIKQNLMEWNPFEDSKITSDPYKTLVLNNISYNA 218
Query: 150 TESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
E KIK F+ YGPIK R++ + K RGY IE+ T D AYK A +K+DGRR+
Sbjct: 219 NEQKIKEHFKMYGPIKSCRIIRNLN-QKHRGYGIIEFERTADFIQAYKNAHEKKIDGRRI 277
Query: 210 LVDVERGRTVPNWRPRRLGGGLGTTRVG 237
VD+ERGRT+ +RP RLGGGLG TR G
Sbjct: 278 GVDIERGRTILRFRPMRLGGGLGITRKG 305
>gi|408398954|gb|EKJ78079.1| hypothetical protein FPSE_01540 [Fusarium pseudograminearum CS3096]
Length = 399
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 112/198 (56%), Gaps = 15/198 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P + RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A E Y P D N+ GD +KTL VARLSYE E +++E
Sbjct: 65 RRDRKKREKKEKLENLVTEAPEH---YRPDKDTNIRGDAFKTLIVARLSYEADEKDLEKE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +GPI+R+R+VTD + KP RGYAF+ + +DM+AA DG ++ RR+
Sbjct: 122 FGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSCDGMRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPRRL 227
VDVERGRTV WRPRRL
Sbjct: 182 KVDVERGRTVKGWRPRRL 199
>gi|46124653|ref|XP_386880.1| hypothetical protein FG06704.1 [Gibberella zeae PH-1]
Length = 393
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 112/198 (56%), Gaps = 15/198 (7%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P + RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A E Y P D N+ GD +KTL VARLSYE E +++E
Sbjct: 65 RRDRKKREKKEKLESLVTEAPEH---YRPDKDTNIRGDAFKTLIVARLSYEADEKDLEKE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +GPI+R+R+VTD + KP RGYAF+ + +DM+AA DG ++ RR+
Sbjct: 122 FGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRAALDSCDGMRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPRRL 227
VDVERGRTV WRPRRL
Sbjct: 182 KVDVERGRTVKGWRPRRL 199
>gi|375073667|gb|AFA34392.1| U1 small nuclear ribonucleoprotein 70KDa, partial [Ostrea edulis]
Length = 162
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 102/155 (65%), Gaps = 9/155 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P++Y PP K +K P G++ F+ F +P D PP + ET
Sbjct: 12 LPPNLLALFAARDPIQYLPPVAKLGSEKKRVPYQGVSIFLKEFEDPKD---TPPPTRVET 68
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R K R E+ A K ++L +DP N +GDPYKTLFVAR++Y+T+ESK++RE
Sbjct: 69 KDERKERKRKERAEQIAYKLEQDLALWDPSN--AATGDPYKTLFVARINYDTSESKLRRE 126
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM 192
FE YGPI+++ L++DK + KPRGYAFIE+ H RDM
Sbjct: 127 FEVYGPIRKISLLSDKSSGKPRGYAFIEFEHERDM 161
>gi|400597493|gb|EJP65226.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 112/198 (56%), Gaps = 15/198 (7%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + +PP PEKRK P + G+A F+ + + P E
Sbjct: 5 LPPNLLALFAPRPPLRWVQPPDHAPEKRKTPHVDGLAAFLPDLKAYKENDTSIPTESWLE 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ K +E + +A K Y P+ DP + GD +KTL VARLSYE E ++RE
Sbjct: 65 ARDRKKLEKKAAVE---DLSANAPKYYKPNEDPLIRGDAFKTLIVARLSYEADERDLERE 121
Query: 158 FESYGPIKRVRLVTDKET-------NKP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F +GPI+R R+V D KP RGYAF+ + +DM+AA DG ++ RR+
Sbjct: 122 FGRFGPIERTRIVVDTHAAEKGNKKKKPHRGYAFVVFEREKDMRAALDACDGIRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPRRL 227
VDVERGRTV W+PRRL
Sbjct: 182 KVDVERGRTVKGWKPRRL 199
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 110/198 (55%), Gaps = 23/198 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-------------PG 84
L NLLKLF PR PL Y P K K + G+A ++ E G
Sbjct: 5 LPPNLLKLFAPRPPLPYLRAVGRDPNKPKLKNVGGVATLLAQIKEQTIVDTEKDDGREEG 64
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
+ E+ + + R R K +E+ KA + Y P DP+ GDPYKTLF++R
Sbjct: 65 EEEQFTYTEEVKRSIRREER--KKMMEENMTKAKDN---YKPSEDPHAQGDPYKTLFISR 119
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKL 204
LS + TE +++EFE YG I+++RLV D + + RGYAF+ Y RDMKAAYK A+G L
Sbjct: 120 LSKKVTEKDLQKEFERYGDIEQIRLVRDPQA-RSRGYAFVVYERERDMKAAYKDAEGLVL 178
Query: 205 DGRRVLVDVERGRTVPNW 222
G+R+LVDVERGRTV W
Sbjct: 179 LGKRILVDVERGRTVRGW 196
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 116/203 (57%), Gaps = 21/203 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHF--AEPGDPLYAPPVEK- 94
L NLLKLF PR PL Y P ++ R P + G+ ++ A D + + K
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVEGVGHILAQLREARTQDLIDSGNAAKR 66
Query: 95 -------AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLF 141
E P A K +R E+ +K AE+ K Y P DP +GDPYKTLF
Sbjct: 67 EEDAMEEGEEPTFTYAEETKRQIRREERKQKKAEDFAKAKDNYKPAEDPEATGDPYKTLF 126
Query: 142 VARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADG 201
++RL +ES ++REFES+G I+RVR+V DK + RGYAFI + RDMKAAYK++D
Sbjct: 127 ISRLHKNASESDLRREFESFGSIERVRIVRDK-NGRSRGYAFIVFERERDMKAAYKESDR 185
Query: 202 RKLDGRRVLVDVERGRTVPNWRP 224
+ G+RVLVDVERGRTV W+P
Sbjct: 186 LHIMGKRVLVDVERGRTVRGWKP 208
>gi|449301882|gb|EMC97891.1| hypothetical protein BAUCODRAFT_31906 [Baudoinia compniacensis UAMH
10762]
Length = 363
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 113/203 (55%), Gaps = 30/203 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEP-GDPLYAPPVEKAE 96
L NLL LF PR L Y PP PE R+ +TG+A F+ E GD Y P E
Sbjct: 5 LPPNLLALFAPRPALRYLPPADHAPEDRRTARITGVAAFLPALKEEFGD--YKP----TE 58
Query: 97 TPVERRAR--IHKLRLEKGAE-KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
+ +E+R R + K +K + A+EL Y+P D N++GD + TLFV RLSY+T
Sbjct: 59 SWLEKRDRRILEKQEHQKYLTGEGAKEL--YNPTKDENITGDAFSTLFVGRLSYDTDVKD 116
Query: 154 IKREFESYGPIKRVRLVTDKETNK--------------PRGYAFIEYMHTRDMKAAYKQA 199
++REF +GPI R+R+V D ++ RGYAF+ + R MKAAYK+
Sbjct: 117 LQREFGRFGPIARIRVVQDNGGSEKDSTRRQKKSRRGMSRGYAFVVFEQERHMKAAYKET 176
Query: 200 DGRKLDGRRVLVDVERGRTVPNW 222
D + GR+VLVDVERGRT+ W
Sbjct: 177 DHLVIRGRKVLVDVERGRTISGW 199
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 122/219 (55%), Gaps = 38/219 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP------PEKRKCP--------------PLTGMAQFVSHF- 80
L +LL+LF R PLEY P P P PLTG+A +
Sbjct: 5 LPPSLLRLFAARPPLEYAAPLVYDPNPNATPLPKDRSLISKRKSIRSPLTGVAATLELVK 64
Query: 81 ------AEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE------LKKYDPHN 128
E D + ++ + AR+ ++ A+KAA+ L++Y PH+
Sbjct: 65 QEAADRGESTDDI----AHESSSANMTLARVTLAEMDAEAKKAAKAEVKQRGLEEYKPHD 120
Query: 129 DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMH 188
+ + D YKTLF+ARL+Y+ TE + REF+ YGPI+ +RLV D+E K RGYAFI Y
Sbjct: 121 NAEATPDAYKTLFLARLAYDVTEKDLHREFDMYGPIETIRLVRDRE-GKSRGYAFIAYER 179
Query: 189 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
RDM+AA+K A+G K++GRRV+VDVERGRTV +W+P RL
Sbjct: 180 ERDMRAAWKDAEGIKINGRRVMVDVERGRTVKDWKPTRL 218
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 28/200 (14%)
Query: 42 LTANLLKLFEPRAPLEYK-P---PPEKRK-CPPLTGMAQ--------FVSHFAEPGDPLY 88
+++ +LF+PR PLEYK P PPEKR+ CP +TG++Q +V+ F + D Y
Sbjct: 8 FPSDVSRLFKPRPPLEYKRPVDYPPEKRQTCPHITGVSQLLGEQLSSYVNQFPQGSDNKY 67
Query: 89 APPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSY 147
E+A H E K +E + ++PH DPN+ DP+KT+FV RL Y
Sbjct: 68 LQKYEEAS---------HAKDNEYA--KLNQETRGWEPHKDPNIKETDPFKTIFVGRLPY 116
Query: 148 ETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKL 204
+TTE +++REF +G I+R+R+V DK TNK +GYAF+ + + + + A K+ G ++
Sbjct: 117 DTTEMELQREFSKFGDIERIRVVRDKVTNKSKGYAFVLFTNPQSSRMACKEIGIHRGLEI 176
Query: 205 DGRRVLVDVERGRTVPNWRP 224
GR +VD+ERGRT+ ++P
Sbjct: 177 KGRIAIVDIERGRTIKYFKP 196
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 25/198 (12%)
Query: 42 LTANLLKLFEPRAPLEY-----KPPPEKRKCPPLTGMAQFVSHFAE------PGDPLYAP 90
L +++ LF+P PL Y PP +++ P +TG++QF+S+ + P D
Sbjct: 8 LPSDISHLFKPGPPLRYFKSTDYPPSKRQTNPNITGVSQFLSNNLQSYLNDFPSD----- 62
Query: 91 PVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYET 149
++T V+ + ++ E+ K E ++ +DPHNDPN+ DPY+T+F+ RL Y+T
Sbjct: 63 ----SQTKVDEDKQFEEVEKER-ISKMNESIRNWDPHNDPNIKDTDPYRTIFIGRLPYDT 117
Query: 150 TESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDG 206
TE ++++ F +G I+++R+V DK TNK +GYAFI ++ K A+K+ G + G
Sbjct: 118 TELELQKLFVKFGEIEKIRIVRDKLTNKSKGYAFIVFLDPMSSKMAFKEIGVHRGIDIKG 177
Query: 207 RRVLVDVERGRTVPNWRP 224
R +VD+ER RT+ ++P
Sbjct: 178 RTCIVDIERSRTMKYFKP 195
>gi|149605642|ref|XP_001519834.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ornithorhynchus anatinus]
Length = 275
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP+ TLFV RL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYIPNK--GVTGDPHLTLFVGRLNLQTTEEKLKETFSRYGDIRKLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ A+G +D + VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P ++ D +G+ RER +RG DR R R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PALKNDFYGEGQRERG-DRG-DRGERSRSRERTWDWRSR 205
Query: 301 DRDHRDDRHHRDRDRTRDRER-ERDRGRERD 330
+RDH R R ++R R E DR RERD
Sbjct: 206 ERDHERGREKRWQEREPPRTWGESDRQRERD 236
>gi|425780249|gb|EKV18264.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
PHI26]
Length = 408
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+AQF++ D + P E+ V R+ R + E+ ++ AE LK Y P +
Sbjct: 37 ISGVAQFLADAKTFADEV---PYNATESWVHRKLREKTEKKEQLEKQIAEGLKNYKPKEN 93
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP----RGYAFIE 185
P GDP+KTLFV RL+YE E+ ++REF +GPI+R+ +V D ++K RGYAF+
Sbjct: 94 PQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKDTVSDKKKKPHRGYAFVV 153
Query: 186 YMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
+ +DM+AAYK+ + ++ GR +VDVERGRT W+PRRL
Sbjct: 154 FEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPRRL 195
>gi|255953297|ref|XP_002567401.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589112|emb|CAP95234.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 13/162 (8%)
Query: 70 LTGMAQFVS---HFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDP 126
L+G+AQF++ FAE P E+ ++R+ R + EK ++ E L+ Y+P
Sbjct: 37 LSGVAQFLTDAKAFAE------EVPYNATESVMQRKLREKAEKKEKLEKQITEGLQNYNP 90
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP----RGYA 182
DP V GDP+KT+FV+RLSY+T E+ ++REF +GPI+R+ +V D ++K RGY
Sbjct: 91 DKDPQVRGDPFKTIFVSRLSYDTKETDLEREFGRFGPIERISIVKDTVSDKKKKPHRGYG 150
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
F+ + +DMKAAYK+ + + GR V+VDVERGRT W+P
Sbjct: 151 FVVFEREKDMKAAYKETENLSIRGRPVVVDVERGRTTKGWKP 192
>gi|425767063|gb|EKV05646.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
Pd1]
Length = 408
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+AQF++ D + P E+ V R+ R + E+ ++ AE LK Y P +
Sbjct: 37 ISGVAQFLADAKTFADEV---PYNATESWVHRKLREKTEKKEQLEKQIAEGLKNYKPKEN 93
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP----RGYAFIE 185
P GDP+KTLFV RL+YE E+ ++REF +GPI+R+ +V D ++K RGYAF+
Sbjct: 94 PQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKDTVSDKKKKPHRGYAFVV 153
Query: 186 YMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
+ +DM+AAYK+ + ++ GR +VDVERGRT W+PRRL
Sbjct: 154 FEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPRRL 195
>gi|342885914|gb|EGU85866.1| hypothetical protein FOXB_03714 [Fusarium oxysporum Fo5176]
Length = 391
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 115/198 (58%), Gaps = 15/198 (7%)
Query: 42 LTANLLKLFEPRAPLEYK-PP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + PP P+ R+ P+TG+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRFLDPPDYAPQHRRTAPITGVAQFLPELQKYKETDVYNPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A + K P+ DPNV GD +KTL VARLSY+ E +++E
Sbjct: 65 ARDRKKREKKEKLETLLREAPDHHK---PNEDPNVRGDAFKTLMVARLSYDADERDLEKE 121
Query: 158 FESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 209
F YGPI+R+R+V D + KP RGYAF+ + +DM+AA DG ++ RR+
Sbjct: 122 FGRYGPIERIRIVVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGMRIKDRRI 181
Query: 210 LVDVERGRTVPNWRPRRL 227
VDVERGRTV W+PRRL
Sbjct: 182 KVDVERGRTVKGWKPRRL 199
>gi|169625439|ref|XP_001806123.1| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
gi|160705655|gb|EAT76571.2| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
Length = 386
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 24/194 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P ++G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPSDHAPEKRCTPKISGIGQYLQAMKEYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + +E + +Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLSEGIHQYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRVRLVTDKETNKP--------RGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
EF YGPI+R+R+V D T P RGYAFI Y + YK+ DG K+ RR
Sbjct: 121 EFGRYGPIERIRIVEDI-TAPPDAPPKKRKRGYAFIVY------EPPYKETDGIKIKDRR 173
Query: 209 VLVDVERGRTVPNW 222
VLVDVERGRTV W
Sbjct: 174 VLVDVERGRTVSGW 187
>gi|357508099|ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
gi|355499353|gb|AES80556.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
Length = 566
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKET 175
+ + YDP DP +GDPY TLFV RLS TTE +++ +G +K +RLV D T
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVGRLSRLTTEETLRKVMSEFGQVKNLRLVRDIVT 100
Query: 176 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RGYAF+E+ R+M+ AY A +D ++VD R + +P W PRRLGGGL +
Sbjct: 101 GASRGYAFVEFETEREMRRAYMDAHHLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNK 160
Query: 236 VGGEEVNQRYSGREQEPSRGP 256
G+ R+ GRE+ P R P
Sbjct: 161 ESGQ---LRFGGREK-PFRAP 177
>gi|67482015|ref|XP_656357.1| U1 small nuclear ribonucleoprotein subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473555|gb|EAL50974.1| U1 small nuclear ribonucleoprotein subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 509
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 115/197 (58%), Gaps = 10/197 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE--PGDPLYAPPVEKAETPV 99
L N LF P P+ + PP EK P +G++ +++ F E P + ++ + P
Sbjct: 5 LPKNFAALFVPDEPIRFLPPVEKHWFPNYSGVSSYLTMFDELTPNNEKKTEEID-SFAPT 63
Query: 100 ERRARIHKLRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
++ + +LR K E+ A+ L+ +DP ++ + +P +T+ V RL +T ES ++
Sbjct: 64 WTKSGLRELRFLKTKEEKAQSLRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDESILQ 123
Query: 156 REFESYGPIKRVRLVTD-KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
R F YG IK++ ++ D K NK GYAF+EY H + + A ++A+G +++ + ++V++E
Sbjct: 124 RLFSEYGEIKKIVIIKDLKGINK--GYAFVEYNHRSEAERACRRANGMRIEEKIIVVEME 181
Query: 215 RGRTVPNWRPRRLGGGL 231
+GRT +++P+RLGG +
Sbjct: 182 KGRTEESFKPKRLGGTI 198
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 19/217 (8%)
Query: 14 AAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLF----EPR--APLEYKPPPEKRKC 67
++ A Q+ + Q +L L ++ +LF EPR P++Y P E R+
Sbjct: 2 VSICATFALQSTTRLTQAEL------ERLPPHIQRLFPECPEPRYLEPIDYAP--EDRRT 53
Query: 68 PPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPH 127
++G++ ++ +P D Y P E+ + ++ R +L+ E+ E + +DP
Sbjct: 54 QKISGVSAYMELLKQP-DSEYVP----TESWLVKQQREKRLKSERQKVTQQERKEAWDPK 108
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
D + GDP+KTLFVARL+++ TE+ ++ + +GP+K VR+V D ++ K GY F+E+
Sbjct: 109 KDDKIVGDPFKTLFVARLAFDVTENDLEEHYIKFGPVKHVRIVRDLKSGKSNGYGFVEFQ 168
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
D + A++ +G + GR+V+VDVERGRTV W P
Sbjct: 169 EEDDFRKAFQMTNGSIIKGRKVVVDVERGRTVSGWLP 205
>gi|356567272|ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 4/141 (2%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKET 175
+ + YDP DP +GDPY TLFVARLS TTE +++ YG +K +RLV D T
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVT 100
Query: 176 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RGYAF+EY R+M+ AY A +D ++VD R + +P W PRRLGGGL +
Sbjct: 101 GASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKK 160
Query: 236 VGGEEVNQRYSGREQEPSRGP 256
G+ R+ GRE+ P R P
Sbjct: 161 ESGQ---LRFGGREK-PFRAP 177
>gi|452845346|gb|EME47279.1| hypothetical protein DOTSEDRAFT_69274 [Dothistroma septosporum
NZE10]
Length = 353
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 110/195 (56%), Gaps = 20/195 (10%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHF-----AEPGDPLYAPPV 92
L NLL LF+ R PL + P P E+R+ + G+A F+ F AE D + +
Sbjct: 5 LPPNLLALFQSRPPLRFLPHHDYPQEERRTHQIDGLAAFLPAFKEKVEAEKDDVVTYSVM 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
+K E + K +E G ++ Y P+ D N+ GD +KTLFV+R+SY+T+
Sbjct: 65 QKKENDKLEKQEKQKYLMEHGHQEL------YKPNEDANIRGDAFKTLFVSRMSYDTSTK 118
Query: 153 KIKREFESYGPIKRVRLVTD-----KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
+++EF +GPI+RVR+V D K+ K RGY F+ + +DMK AYK + + GR
Sbjct: 119 DLEKEFGRFGPIERVRIVQDRGEKSKKKGKSRGYGFVLFEKEKDMKTAYKDCENLTIRGR 178
Query: 208 RVLVDVERGRTVPNW 222
RVLVDVERGRTV W
Sbjct: 179 RVLVDVERGRTVNGW 193
>gi|389632567|ref|XP_003713936.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|351646269|gb|EHA54129.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|440473215|gb|ELQ42030.1| hypothetical protein OOU_Y34scaffold00240g37 [Magnaporthe oryzae
Y34]
gi|440480244|gb|ELQ60919.1| hypothetical protein OOW_P131scaffold01214g36 [Magnaporthe oryzae
P131]
Length = 405
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 42 LTANLLKLFEPRAPLEYK----PPPEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL Y P +RK +TG+AQ+ + D Y P E
Sbjct: 5 LPPNLLALFAPRPPLRYLPPSDAPAHERKTATITGLAQYKQALEDYKDKDNYVP----TE 60
Query: 97 TPVERRARIHKLRLEK-GAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++RR R KL EK A K E KY P +DPN+ GD +KTL VARLSY+ E ++
Sbjct: 61 SWLQRRDR-KKLEHEKEIALKLKEGPAKYKPQDDPNIRGDAFKTLIVARLSYDANEQDLE 119
Query: 156 REFESYGPIKRVRLVTDKETN-------KP-RGYAFIEYMHTRDMKAAYKQADGRKLDGR 207
REF +G I+R+R++ D + KP RGYAF+ + +DM+AA + DG ++ R
Sbjct: 120 REFGRFGTIERIRIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALEGCDGIRIKDR 179
Query: 208 RVLVDVERGRTVPNWRP 224
R+ VDVERGRTV W+P
Sbjct: 180 RIKVDVERGRTVEGWKP 196
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 111/207 (53%), Gaps = 25/207 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P P + +TG+A ++ E A +++
Sbjct: 5 LPPNLLKLFAPRPPLPYARPIDKDPNVVRPKTVTGVAALLAAIREENT---AGLIDQGRA 61
Query: 98 PVERRARI---HKLRLEKGAEKAA--------------EELKKYDPHNDPNVSGDPYKTL 140
E A K L + + + Y P ++P+ GDPYKTL
Sbjct: 62 EDEAGAVTEEDSKFTLAEETRREIRREEKKKKKVEDFKNAVNNYRPVDNPDAQGDPYKTL 121
Query: 141 FVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD 200
FVARL + TE+ ++REFE +G I R+++V +K N RGYAFI Y RDMK AYK+ +
Sbjct: 122 FVARLPKKATENDLRREFEMFGVIARIKIVKNKNGNS-RGYAFIVYERERDMKVAYKEGE 180
Query: 201 GRKLDGRRVLVDVERGRTVPNWRPRRL 227
+L G+R+LVDVERGRTV W+PRRL
Sbjct: 181 HMQLLGKRILVDVERGRTVRGWKPRRL 207
>gi|301112318|ref|XP_002905238.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
gi|262095568|gb|EEY53620.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
Length = 204
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 90/148 (60%), Gaps = 12/148 (8%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
FAE DP+ ++ +T +KG +A ++D DP + GDPY T
Sbjct: 40 FAEEYDPVQIGSIDGTDTTPH----------DKGLVRAMNA--RFDATKDPQIHGDPYAT 87
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
LFVARLS+ T ES I + F +YGPI+R+RLV DK+T++ +GYAF+E+ H RD AY+ A
Sbjct: 88 LFVARLSFSTAESTILQFFSNYGPIRRLRLVRDKKTDQSKGYAFVEFEHERDFGRAYRHA 147
Query: 200 DGRKLDGRRVLVDVERGRTVPNWRPRRL 227
R +DG +LVD ER R + W+PRRL
Sbjct: 148 HRRVIDGATLLVDFERSRVMKGWKPRRL 175
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 112/202 (55%), Gaps = 19/202 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL Y P K + G+ ++ E
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGDGME 66
Query: 90 ----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARL 145
P AE + R + R + K A+E Y P +DP GDPYKTLF++RL
Sbjct: 67 EGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKE--TYKPSDDPEAIGDPYKTLFISRL 124
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205
+E +++R+FES+G I+RVR+V D + + RGYAFI Y RDMKAAYK++DG ++
Sbjct: 125 HKGASEMELRRDFESFGTIERVRIVRDSK-GRSRGYAFIVYERERDMKAAYKESDGLHIN 183
Query: 206 GRRVLVDVERGRTVPNWRPRRL 227
G+R+LVDVERGRTV W+PRRL
Sbjct: 184 GKRILVDVERGRTVRGWKPRRL 205
>gi|395529739|ref|XP_003766966.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Sarcophilus harrisii]
Length = 283
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 142/251 (56%), Gaps = 19/251 (7%)
Query: 130 PN--VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
PN VSGDPY TLFV RL+ +TTE K+K F YG I+++RLV D T + YAFIEY
Sbjct: 41 PNKGVSGDPYLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYR 100
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
+ + AY+ A+G +D + VD E R + W PRRLGGG G + G+ R+ G
Sbjct: 101 EEQSLLKAYRDANGLVIDQHEIFVDYELERVLKGWIPRRLGGGFGGKKESGQ---LRFGG 157
Query: 248 REQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDD 307
R++ P R P P + D +G+ RER RE RDR + ++ + HDR R++ ++
Sbjct: 158 RDR-PFRKPINL--PVFKSDFYGEGQRER-REWCRDRSWD-WRARDQDHDRGREKRWQER 212
Query: 308 RHHRDRDRTRDRERERD-------RGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD 360
D+ +R+RERD +DR+R +DR+R +D ER ++ RD+ ++
Sbjct: 213 ESSSAWDKN-ERQRERDFREERSRGRERKDRER-KDRERKDRERKDRERKDQERRDRSKE 270
Query: 361 RDRTRERERDR 371
RD ++R+ D+
Sbjct: 271 RDSKKQRKDDK 281
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 112/202 (55%), Gaps = 19/202 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL Y P K + G+ ++ E
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGDGME 66
Query: 90 ----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARL 145
P AE + R + R + K A+E Y P +DP GDPYKTLF++RL
Sbjct: 67 EGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKE--TYKPSDDPEAIGDPYKTLFISRL 124
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 205
+E +++R+FES+G I+RVR+V D + + RGYAFI Y RDMKAAYK++DG ++
Sbjct: 125 HKGASEMELRRDFESFGTIERVRIVRDSK-GRSRGYAFIVYERERDMKAAYKESDGLHIN 183
Query: 206 GRRVLVDVERGRTVPNWRPRRL 227
G+R+LVDVERGRTV W+PRRL
Sbjct: 184 GKRILVDVERGRTVRGWKPRRL 205
>gi|325180074|emb|CCA14475.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein putative
[Albugo laibachii Nc14]
Length = 224
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+DP D N+ GD KTLF+ RL ET++ I + F SYGPI VRLV D T +GYAF
Sbjct: 86 FDPKRDSNIKGDATKTLFIGRLHSETSQDAIYQLFSSYGPIAHVRLVRDIVTKASKGYAF 145
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY R + A + + R LDGR++LVD ER R +P W+PRR+GGGLG G +E Q
Sbjct: 146 VEYRDRRHFERALEDGNDRILDGRKLLVDYERSRLMPGWKPRRMGGGLG----GKKESGQ 201
Query: 244 RYSGREQEPSRGP 256
G P + P
Sbjct: 202 LRFGGVSHPFKRP 214
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 113/211 (53%), Gaps = 36/211 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P ++ + + G+AQ ++ E +K +
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRKKHVNGVAQLLARLRE----------DKTQG 56
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK---------------------YDPHNDPNVSGDP 136
+E E+ A AEE K+ Y P +D GDP
Sbjct: 57 MIESGGSEGMEEGEEPAFTYAEETKRAIRRDERKAKKTEEFKIAKEIYKPADDAEAVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
+KTLF+ARL T+S ++REFE +G I+RVR+V DK + RGYAFI + RDMKAAY
Sbjct: 117 FKTLFIARLHKSATDSDLRREFEGFGSIERVRIVRDKR-GRSRGYAFIVFERERDMKAAY 175
Query: 197 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
K++D + G+RVLVDVERGRTV W+PRRL
Sbjct: 176 KESDRLHIMGKRVLVDVERGRTVRGWKPRRL 206
>gi|156040914|ref|XP_001587443.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980]
gi|154695819|gb|EDN95557.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 456
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 109/217 (50%), Gaps = 38/217 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + PP PE RK P ++G+A ++ E + Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHAPENRKTPAVSGLAAYLPALKEYKETDQYTP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ ++R+ R+ + + + E K + P DPN+ GD +KTL V+RL YE TE ++R
Sbjct: 61 SWLQRKDRVTQEKKAAHEKIIQEAPKTFKPSEDPNIRGDAFKTLIVSRLDYEATEKDLER 120
Query: 157 EFESYGPIKRVRLVTD--------KETNKPRGYAFIEYMHTRDMKA--------AYKQAD 200
EF +GPI+R+R+V D K+ K RGYAF+ + +DM+ Y
Sbjct: 121 EFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMRGKAEHTLYPPYTNGI 180
Query: 201 GRKL-------------DGRRVLVDVERGRTVPNWRP 224
+L RR+ VDVERGRTV W P
Sbjct: 181 VAQLAHRFGVSTFLSLIKDRRIKVDVERGRTVKGWLP 217
>gi|300121567|emb|CBK22085.2| unnamed protein product [Blastocystis hominis]
Length = 390
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 104/205 (50%), Gaps = 31/205 (15%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+D D + +PYKTLFV RL Y+TTE + + F YG ++ V L+ D T RGY F
Sbjct: 45 FDSTKDRMICCNPYKTLFVGRLKYDTTEEALYQFFSRYGKLQSVHLIRDLVTGCSRGYGF 104
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+E++H D +A+ A LDG ++LVD R +TVP W PRRLGGG+G + G+
Sbjct: 105 VEFVHEEDFTSAFYGAHRTILDGSQILVDFMRAQTVPGWVPRRLGGGVGGKKQSGQ---M 161
Query: 244 RYSGRE-------------QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREK 290
R+ GR+ ++P+ G + +P DR G +E GR ++ REK
Sbjct: 162 RFGGRDCPFHAPYESNRFIKKPNSGDASGGKP---SDRRGSGKEFDEKEDGRYEDKRREK 218
Query: 291 SLELSHDRPRDRDHRDDRHHRDRDR 315
E D R+H DR R
Sbjct: 219 REE------------DGRYHDDRSR 231
>gi|356524599|ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
Length = 358
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKET 175
+ + YDP DP +GDPY TLFVARLS T E +++ YG +K RLV D T
Sbjct: 41 QLCSSIGLYDPFGDPRAAGDPYCTLFVARLSRLTNEDNLRKVMSKYGRVKNFRLVRDIVT 100
Query: 176 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
RGYAF+EY R+M+ AY A +D ++VD R + +P W PRRLGGGL +
Sbjct: 101 GASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKK 160
Query: 236 VGGEEVNQRYSGREQEPSRGP 256
G+ R+ G+E+ P R P
Sbjct: 161 ESGQ---LRFGGKEK-PFRAP 177
>gi|157140206|ref|XP_001647625.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108866540|gb|EAT32293.1| AAEL015585-PA [Aedes aegypti]
Length = 176
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 7/159 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
FE+YG I ++ ++ DKET KPRGYAFIEY H RDM Y
Sbjct: 122 FETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDMHCKY 160
>gi|405117502|gb|AFR92277.1| U1 snRNP 70K protein [Cryptococcus neoformans var. grubii H99]
Length = 435
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI+R+R+V +++ K GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNRK-GKSNGYAF 197
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I Y RDMKAAYK A+G + +++LVDVERGRTV W+P+RL
Sbjct: 198 IVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQRL 241
>gi|58258329|ref|XP_566577.1| U1 snRNP 70K protein (short form) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222714|gb|AAW40758.1| U1 snRNP 70K protein (short form), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 429
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI+R+R+V +++ K GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNRK-GKSNGYAF 197
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I Y RDMKAAYK A+G + +++LVDVERGRTV W+P+RL
Sbjct: 198 IVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQRL 241
>gi|134106223|ref|XP_778122.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260825|gb|EAL23475.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI+R+R+V +++ K GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNRK-GKSNGYAF 197
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I Y RDMKAAYK A+G + +++LVDVERGRTV W+P+RL
Sbjct: 198 IVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQRL 241
>gi|331249519|ref|XP_003337376.1| hypothetical protein PGTG_18970 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 545
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 12/101 (11%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DPN +GDPY+TLF++RLSYE TES +KREF+ YGPI ++ +V +K T K G
Sbjct: 213 YDPKQDPNATGDPYRTLFISRLSYEVTESDLKREFDMYGPIDKLVIVKNKLTGKSPGM-- 270
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
AAYK A+G K+ GRR+LVDVERGRTV W+P
Sbjct: 271 ----------AAYKDAEGLKIKGRRILVDVERGRTVKGWKP 301
>gi|321251142|ref|XP_003191972.1| U1 snRNP 70K protein (short form) [Cryptococcus gattii WM276]
gi|317458440|gb|ADV20185.1| U1 snRNP 70K protein (short form), putative [Cryptococcus gattii
WM276]
Length = 435
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI+R+R+V +++ K GYAF
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNRK-GKSNGYAF 197
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I Y RDMKAAYK A+G + +++LVDVERGRTV W+P+RL
Sbjct: 198 IVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQRL 241
>gi|327276115|ref|XP_003222816.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Anolis carolinensis]
Length = 260
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 110/197 (55%), Gaps = 20/197 (10%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ VSGDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVARLNLQTTEDKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAF+EY R + A++ A+ +D R + VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFVEYKEERALIKAHRDANRLVIDQREIFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P ++ D +G+ ER RDR R+ + R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PAMKSDFYGEGPMER-----RDRVWSRD-------GKTR 195
Query: 301 DRDHRDDRHHRDRDRTR 317
DRDH +R R +R R
Sbjct: 196 DRDHDRNREQRRSERDR 212
>gi|395513787|ref|XP_003761104.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Sarcophilus harrisii]
Length = 263
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 109/199 (54%), Gaps = 18/199 (9%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ VSGDP+ TLFV RL+ +TTE K+K F YG I+++RLV D T +
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKR 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ A+G +D + VD E R + W PRRLGGG G + G+
Sbjct: 94 YAFIEYREERSLLKAYRDANGLVIDQHEIFVDYELERILKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P + D +G+ RER RE R++S + R R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVFKSDFYGEGQRER-------REWSRDRSWDW---RTR 197
Query: 301 DRDHRDDRHHRDRDRTRDR 319
DRDH R R ++R R
Sbjct: 198 DRDHDRGREKRRQERESSR 216
>gi|358054541|dbj|GAA99467.1| hypothetical protein E5Q_06166 [Mixia osmundae IAM 14324]
Length = 375
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 113/204 (55%), Gaps = 23/204 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP-------PEKRKCPPLTGMAQFV-SHFAEPGDPLYAPPVE 93
L NLLKLF PR + Y P P + P + + + V AE G+ +E
Sbjct: 5 LPPNLLKLFAPRPAIPYAKPLGRDIDRPLNKAIPGVFDVIERVRQERAERGEEA----LE 60
Query: 94 KAETPVERRARIHK--LRLEKG--------AEKAAEELKKYDPHNDPNVSGDPYKTLFVA 143
E + A L++ G E + L+ Y P D + GDPY+T+F++
Sbjct: 61 AEERSLNPEAFTDSADLKIANGRAERKRRKEETYKKALETYKPKEDEHAVGDPYRTIFIS 120
Query: 144 RLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 203
RL + TE ++++EF+ YG I+ ++++ D + K RGYAFI Y RDMKAAYK ADG K
Sbjct: 121 RLHRDATEEQLRKEFDLYGRIENLKIIRDSK-EKSRGYAFILYERERDMKAAYKDADGLK 179
Query: 204 LDGRRVLVDVERGRTVPNWRPRRL 227
+ G+R+LVDVERGRTV W+PRRL
Sbjct: 180 ILGKRILVDVERGRTVKGWKPRRL 203
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 110/211 (52%), Gaps = 36/211 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P ++ R P + G Q ++ E EK +
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVDGAGQLLARLRE----------EKTQG 56
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK---------------------YDPHNDPNVSGDP 136
+ E+ AEE K+ Y P +DP GDP
Sbjct: 57 MMNSGEGEGMEEGEEPNFTHAEETKRQMRREERKKKKTEEFRIAKESYKPADDPEAVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
YKTLF+ARL TE ++REFE +G I+RVR+V DK + +GYAFI + RDMKAAY
Sbjct: 117 YKTLFIARLHKSATEGDLRREFEGFGSIERVRIVRDK-NGRSQGYAFIVFERERDMKAAY 175
Query: 197 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
K++D + G+RVLVDVERGRTV W+PRRL
Sbjct: 176 KESDRLHIMGKRVLVDVERGRTVRGWKPRRL 206
>gi|157129095|ref|XP_001661605.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872353|gb|EAT36578.1| AAEL011340-PA [Aedes aegypti]
Length = 186
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA-YKQADG 201
FE+YG I ++ ++ DKET KPRGYAFIEY H RDM K A+G
Sbjct: 122 FETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDMHWLNLKWAEG 166
>gi|50756329|ref|XP_415114.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Gallus gallus]
Length = 263
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ A+ +D V VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEVFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER---SRE-----RGRDREREREK 290
R+ GR++ P R P P ++ D +G+ E+ SRE R RDRE ER +
Sbjct: 153 --LRFGGRDR-PFRKPINL--PNVKNDFYGEGSAEKRNWSREGTRDWRTRDREHERSR 205
>gi|375152292|gb|AFA36604.1| U1 snRNP-interacting 70 kDa protein, partial [Lolium perenne]
Length = 77
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 65/75 (86%)
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ET E++ RI +L+LE+GA K AEEL+KYDP NDPNV+GDPYKTLFVARL+YET+E K+
Sbjct: 3 CETRAEKKDRIRQLKLEQGAAKVAEELQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKV 62
Query: 155 KREFESYGPIKRVRL 169
KR+FE+YGPIKRV +
Sbjct: 63 KRDFEAYGPIKRVSI 77
>gi|326929594|ref|XP_003210944.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Meleagris gallopavo]
Length = 265
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ A+ +D V VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVVDQHEVFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER---SRE-----RGRDREREREK 290
R+ GR++ P R P P ++ D +G+ E+ SRE R RDRE ER +
Sbjct: 153 --LRFGGRDR-PFRKPINL--PNVKNDFYGEGSAEKRNWSREGARDWRTRDREHERSR 205
>gi|430811873|emb|CCJ30667.1| unnamed protein product [Pneumocystis jirovecii]
Length = 177
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 9/161 (5%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+ R PL Y PP P R+ P ++G+A++V A+ Y + E+
Sbjct: 5 LPPPLLALFQARPPLRYLPPCDIAPSLRRTPRISGIARYVPLLAD-----YDKDYQPTES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E+R R + + + E + L Y P DPN+ GDPYKTLFV+RLSY+ TE + RE
Sbjct: 60 WLEKRERRREEKKKIQEEVIRKGLAAYRPRQDPNIKGDPYKTLFVSRLSYKVTEQDLMRE 119
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
F YG I+R+RLVT+ + NKP GYAFI Y RDMK YKQ
Sbjct: 120 FGRYGAIERIRLVTNVKNNKPMGYAFIVYERERDMKGLYKQ 160
>gi|157129097|ref|XP_001661606.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872354|gb|EAT36579.1| AAEL011340-PB [Aedes aegypti]
Length = 189
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM 192
FE+YG I ++ ++ DKET KPRGYAFIEY H RDM
Sbjct: 122 FETYGKIVKIIIIHDKETGKPRGYAFIEYEHERDM 156
>gi|449279308|gb|EMC86943.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba
livia]
Length = 254
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 25/217 (11%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEAFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ A+ +D + VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER---SRE-----RGRDREREREKSL 292
R+ GR++ P R P P ++ D +G+ E+ SRE R RDR+ ER +
Sbjct: 153 --LRFGGRDR-PFRKPINL--PNMKNDFYGEGSAEKRNWSREGTRDWRTRDRDHERSR-- 205
Query: 293 ELSHDRP-RDRDHRDDRHHRDRDRTRDRERERDRGRE 328
+ RP R+R + +R RD + ER RGRE
Sbjct: 206 --DNRRPERERSW----AWGESERERDSKEERSRGRE 236
>gi|167382928|ref|XP_001736333.1| U1 small nuclear ribonucleoprotein 70 kDa [Entamoeba dispar SAW760]
gi|165901504|gb|EDR27587.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
dispar SAW760]
Length = 422
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 113/200 (56%), Gaps = 16/200 (8%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHF--AEP-------GDPLYAPPV 92
L N LF P P+ + PP EK P +G++ +++ F EP G +AP
Sbjct: 5 LPKNFAALFVPDEPIRFLPPIEKHWFPNYSGVSSYLTMFDQIEPNNEKKTEGADSFAPTW 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
K+ R R K++ EK +++ +DP ++ + +P +T+ V RL +T ES
Sbjct: 65 TKSGL---RELRFLKMKEEK-TRSLRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDES 120
Query: 153 KIKREFESYGPIKRVRLVTD-KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
+++ F YG IK++ ++ D K NK GYAF+EY H + + A ++A+G +++ + ++V
Sbjct: 121 ILQQLFGEYGEIKKIVIIKDLKGINK--GYAFVEYNHRSEAERACRRANGMRIEEKIIVV 178
Query: 212 DVERGRTVPNWRPRRLGGGL 231
++E+GRT +++P+RLGG +
Sbjct: 179 EMEKGRTEESFKPKRLGGTI 198
>gi|126324312|ref|XP_001375255.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Monodelphis domestica]
Length = 261
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 125/244 (51%), Gaps = 51/244 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ VSGDP+ TLFV RL+ +TTE K+K F YG I+++RLV D T +
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKLRLVRDVVTGFSKR 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ A+G +D + VD E R + W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERILKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P + D +G+ RER RE S
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVFKSDFYGEGQRER-----------REWS--------- 187
Query: 301 DRDHRDDRHHRDRDRTRD-RERERDRGRER---DRDRTRDRDRGRDRGRDHERDREKDRD 356
RDRT D R R+ DRGRE+ +R+ TR D ++ER+RE+D
Sbjct: 188 ------------RDRTWDWRARDHDRGREKRRQERETTRSWD-------ENERERERDFR 228
Query: 357 KERD 360
ER+
Sbjct: 229 DERN 232
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P D GDPYKTLF+ARLS ++ ++R FESYGPI+RVR+ DK+ + RGYAF
Sbjct: 109 YKPSEDTEAVGDPYKTLFIARLSKNAADADLRRAFESYGPIERVRIARDKK-GRSRGYAF 167
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I + RDMK AYK+AD + G+ +LVDVERGRTV +W+PRRL
Sbjct: 168 IVFDRERDMKVAYKEADKMVILGKAILVDVERGRTVRDWKPRRL 211
>gi|225433837|ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera]
gi|297743756|emb|CBI36639.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G +AE P+ A ++ +T A L YDP D
Sbjct: 1 MSGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAG--------LYDPFGD 52
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P V GDPY T+FV L++ TTE + + +G +K +RLV T +GYAF+EY
Sbjct: 53 PKVIGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETE 112
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
R+M+ AY+ A +D ++VD R + +P W PRRLGGG+G + G+ R+ GRE
Sbjct: 113 REMRRAYEDAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQ---LRFGGRE 169
Query: 250 QEPSRGPSR 258
+ P R P R
Sbjct: 170 R-PFRAPLR 177
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus (Silurana)
tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP+ TL+VARLS +TTE K+K F YG IKR+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPHLTLYVARLSQQTTEEKLKEVFSRYGDIKRIRLVRDFITGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY + A++ A+ +D R + VD E R + W PRRLGGG G + G+
Sbjct: 94 YAFIEYKQENAIMKAHRDANKLVIDQREIFVDFELERNLKGWVPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSR---SAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHD 297
R+ GR++ P R P P E R R R RS++R D +R D
Sbjct: 153 --LRFGGRDR-PFRKPINLPIFPHPFNSEGRGERRPRSRSKDRSHDWREQR-------RD 202
Query: 298 RPRDRDHR----------DDRHHRDRDRTRDRERERDRGRERDRDRTR-DRDRGRDRGRD 346
RDR R DD+ H R+R RER R D+DR R D R + R R+
Sbjct: 203 YGRDRGIRRQDKERPYTKDDKEHNSEHTKRERSRERTRN---DKDRNRKDSKREKSRERN 259
Query: 347 HER 349
+++
Sbjct: 260 YKK 262
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 28/202 (13%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPP----EKRK-CPPLTGMAQ--------FVSHFAEPGDP 86
T A++ +LF+PR PL YK P EKR+ CP +TG++Q ++S F +
Sbjct: 6 TKFPADVSRLFKPRPPLAYKKPVDYPLEKRQTCPHITGVSQILDKPLAGYLSDFPQGSQN 65
Query: 87 LYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARL 145
Y EKA R R LE +L ++DP NDPN+ DPY+T+FV RL
Sbjct: 66 KYLQDYEKAADSKNREQR----ELE-------NKLSEWDPQNDPNMKDTDPYRTIFVGRL 114
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GR 202
Y+ +E +++R+F +G I++VR+V DK N+ +GYAFI + + K+A K+ G
Sbjct: 115 PYDISEVELQRKFNEFGEIEKVRVVRDKINNQSKGYAFIVFTDPQSSKSACKEYGLHRGI 174
Query: 203 KLDGRRVLVDVERGRTVPNWRP 224
++ GR +VD+ERGRTV ++P
Sbjct: 175 EIKGRTCIVDIERGRTVKYFKP 196
>gi|350536563|ref|NP_001232485.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128442|gb|ACH44940.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128443|gb|ACH44941.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128444|gb|ACH44942.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128445|gb|ACH44943.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
Length = 265
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 35/222 (15%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 LARYVPNK--GVMGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ A+ +D + VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER---SRE-----RGRDREREREKSL 292
R+ GR++ P R P P ++ D +G+ E+ SRE R RDR+ ER +
Sbjct: 153 --LRFGGRDR-PFRKPINL--PNMKNDFYGEGSSEKRNWSREGTRDWRTRDRDHERSR-- 205
Query: 293 ELSHDRPRDRDHRDDRHHRDRDRTR---DRERERDRGRERDR 331
D+ +R+R+ D ERERD ER R
Sbjct: 206 --------------DKRWPERERSWAWGDSERERDSKEERSR 233
>gi|224161968|ref|XP_002188436.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Taeniopygia guttata]
Length = 265
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
+ +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+++RLV D T +G
Sbjct: 36 MARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ A+ +D + VD E RT+ W PRRLGGG G + G+
Sbjct: 94 YAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTLKGWIPRRLGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER---SRE-----RGRDREREREK 290
R+ GR++ P R P P ++ D +G+ E+ SRE R RDR+ ER +
Sbjct: 153 --LRFGGRDR-PFRKPINL--PNMKNDFYGEGSSEKRNWSREGTRDWRTRDRDHERSR 205
>gi|254570158|ref|XP_002492189.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031986|emb|CAY69909.1| hypothetical protein PAS_chr2-2_0449 [Komagataella pastoris GS115]
gi|328351324|emb|CCA37723.1| U1 small nuclear ribonucleoprotein 70 kDa [Komagataella pastoris
CBS 7435]
Length = 295
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 46 LLKLFEPRAPLEY-KP---PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
+ KLFEP+ P ++ +P P E+R+ + G+ + + + + P E +R
Sbjct: 29 IAKLFEPKPPFKFLEPVDYPIEQRRTKIVKGVGGLLDLVKKYNEEV---PYTVTEGNQQR 85
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
+ R+ + + + AEK +L ++P D N+ GD +T+FVARL Y +TE ++ +
Sbjct: 86 QQRLKQEKRKLEAEKLQRDLAAWNPEKDLNMIGDASRTIFVARLDYNSTEVDLQNSLGVF 145
Query: 162 GPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 221
G I R+R+V D T+K +GY F+ + D + AY+ + K++ R VLVD+ERGRTV N
Sbjct: 146 GEIDRIRVVRDVNTDKSKGYGFVVFKQPDDARTAYRNSSSLKINNRPVLVDIERGRTVKN 205
Query: 222 WRPRR 226
W+PRR
Sbjct: 206 WKPRR 210
>gi|119572836|gb|EAW52451.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_f [Homo sapiens]
Length = 304
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 86/130 (66%), Gaps = 25/130 (19%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
ELK +DPHNDPN GD +KTLF + +V K + KPR
Sbjct: 19 ELKMWDPHNDPNAQGDAFKTLF-------------------------IHMVYSKRSGKPR 53
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
GYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG
Sbjct: 54 GYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGA 113
Query: 240 EVNQRYSGRE 249
+VN R+SGR+
Sbjct: 114 DVNIRHSGRD 123
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 114/192 (59%), Gaps = 14/192 (7%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL Y P PE R+ + G++ F+ AE + P+ +E+
Sbjct: 5 LPPNLLALFQPRPPLRYLPPHDYAPEDRRTRAIDGVSAFLPALAEKVESSKNDPI--SES 62
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ERR R+ + + K A E +K+ Y P D N+ GD ++T+F+ RL Y T ++
Sbjct: 63 WLERRDRLTRDKAAKQAWVTGEGVKELYKPTEDENIRGDAFRTIFIGRLPYTCTTKDLEH 122
Query: 157 EFESYGPIKRVRLVTDKETNKP------RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
EF +GPI+RVR+VTD+ + KP RGYAF+ + RDMKAAYK+++ + R VL
Sbjct: 123 EFGRFGPIERVRIVTDR-SEKPSKKGTSRGYAFVLFESERDMKAAYKESERLLIRNRPVL 181
Query: 211 VDVERGRTVPNW 222
VDVERGRTV W
Sbjct: 182 VDVERGRTVTGW 193
>gi|392577664|gb|EIW70793.1| hypothetical protein TREMEDRAFT_73567 [Tremella mesenterica DSM
1558]
Length = 335
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
Y P +D GDPYKTLF++RLS + TE ++REFE YG I+ +R+V +++ K YAF
Sbjct: 140 YRPQDDTKAVGDPYKTLFISRLSSKATEQDLRREFEMYGAIEHIRIVRNRK-GKSNSYAF 198
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
I Y RDMKAAYK A+G + +++LVDVERGRTV W+PRRL
Sbjct: 199 IVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPRRL 242
>gi|45187810|ref|NP_984033.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|44982571|gb|AAS51857.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|374107246|gb|AEY96154.1| FADL063Wp [Ashbya gossypii FDAG1]
Length = 320
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 28/193 (14%)
Query: 49 LFEPRAPLEYKPP----PEKRKCPPLT---------GMAQFVSHFAEPGDPLYAPPVEKA 95
LF+PR PL+Y+ P PE+RK +T + +++ F P
Sbjct: 15 LFKPRPPLQYRKPVDYAPEERKTATITPVSSVLGTDALMRYMQEF----------PTGSE 64
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESKI 154
++R + + K E EEL K+ P ND N+ G DP++T+FV RL Y+ E ++
Sbjct: 65 NLLIQRYEELKTINSRKEQE-LEEELAKWAPENDTNIQGTDPFRTIFVGRLHYDVDELEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+RVR+V DK TNKPRGYAF+ + K AY++ G + GR +V
Sbjct: 124 QKHFIKFGEIERVRIVRDKITNKPRGYAFVLFRDPECSKKAYREIGVHRGLMIRGRSAIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV +RP
Sbjct: 184 DIERGRTVKFFRP 196
>gi|384497600|gb|EIE88091.1| hypothetical protein RO3G_12802 [Rhizopus delemar RA 99-880]
Length = 178
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 73/104 (70%), Gaps = 8/104 (7%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+DP D N++GDP+ TLFV LS E TES +++EFE +RL+ D E K R YAF
Sbjct: 2 HDPEKDANITGDPFNTLFVTHLSPELTESDLQKEFE-------IRLIRD-ENGKSRCYAF 53
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
IE+ +DM+AAYK ADG K+ GRR+LVDVER RTV W+PRRL
Sbjct: 54 IEFEREKDMRAAYKDADGLKILGRRILVDVERARTVKGWKPRRL 97
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 111/211 (52%), Gaps = 36/211 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP---------PEKRKCPPLTGMAQFVSHF----------AE 82
L NLLKLF PR L Y P P+K + G+A ++ A
Sbjct: 7 LPPNLLKLFAPRPALPYTRPLDRDIDRVRPKK-----VDGVAHILAQLEEDKTQGMINAG 61
Query: 83 PGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKK------YDPHNDPNVSGDP 136
G+ + E+ E P A K +L + K +E + Y P +P V GDP
Sbjct: 62 QGEVM-----EEGEEPTFTLAEEVKRQLRREERKKKKEEEFKLAKENYKPQENPEVVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
YKTLFVA L TE+ ++REFE +G ++RVR+V DK N R YAF+ + RDMKAA+
Sbjct: 117 YKTLFVAHLPKHATENDVRREFERFGSLERVRIVRDKRGNS-RKYAFVVFERERDMKAAF 175
Query: 197 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
K +D + G RVLVDVERGRTV W+PRRL
Sbjct: 176 KSSDDIAVMGARVLVDVERGRTVRGWKPRRL 206
>gi|218202449|gb|EEC84876.1| hypothetical protein OsI_32022 [Oryza sativa Indica Group]
Length = 385
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 15/146 (10%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKR-----------EFESYGPIKRVRLVTD 172
YDP DP +GDPY T+FV RLS T + +++ E YG +K +RLV D
Sbjct: 50 YDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKFLFLVVYVREQEMSRYGRVKSMRLVRD 109
Query: 173 KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
T RGYAF+EY R+M+ AY+ A +DGR VLVD R + +P W PRR GGGLG
Sbjct: 110 IVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGREVLVDYYRQQLMPGWIPRRSGGGLG 169
Query: 233 TTRVGGEEVNQRYSGREQEPSRGPSR 258
+ G+ R+ GRE+ P R P R
Sbjct: 170 GKKESGQ---LRFGGRER-PFRAPLR 191
>gi|91086635|ref|XP_966565.1| PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum]
gi|270009757|gb|EFA06205.1| hypothetical protein TcasGA2_TC009054 [Tribolium castaneum]
Length = 194
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEY 186
H + +V G P T+FV+RLS +TT+ IK F YGP++R RLV D T P+GYAFIEY
Sbjct: 45 HPNRHVKGRPECTIFVSRLSLKTTKDTIKDIFSKYGPLRRFRLVKDIVTGMPKGYAFIEY 104
Query: 187 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 246
+ D + AY +A+ +DG + VD E R + WRPRRLGGG G + G+ R+
Sbjct: 105 ENELDAEEAYCKANKMNIDGNIIFVDFECERLLKGWRPRRLGGGFGGKKESGQ---LRFG 161
Query: 247 GRE 249
GR+
Sbjct: 162 GRD 164
>gi|115480119|ref|NP_001063653.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Oryza sativa Japonica Group]
gi|113631886|dbj|BAF25567.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|215704450|dbj|BAG93884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641906|gb|EEE70038.1| hypothetical protein OsJ_29992 [Oryza sativa Japonica Group]
Length = 375
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DP +GDPY T+FV RLS T + +++E YG +K +RLV D T RGYAF
Sbjct: 51 YDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKEMSRYGRVKSMRLVRDIVTGASRGYAF 110
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY R+M+ AY+ A +DG VLVD R + +P W PRR GGGLG + G+
Sbjct: 111 VEYETDREMRRAYEDAHHSIIDGSEVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQ---L 167
Query: 244 RYSGREQEPSRGPSRSAE---------PRIREDRHGDRDRERSRERGRDREREREKSLEL 294
R+ GRE+ P R P R P E R+ R + R + + RE+S
Sbjct: 168 RFGGRER-PFRAPLRPIPYDELKRLGIPPPPEGRYMTRYQVPPPPRRKSSDIYREESPP- 225
Query: 295 SHDRPRDRDHRDDRHHR-------DRDRTRDRER 321
+ R +D D H+R D D T R
Sbjct: 226 ---KRRSKDRVDSSHYRRYCSPTQDDDSTVSTHR 256
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 123/221 (55%), Gaps = 27/221 (12%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
+DP DP + G +T+FV RL + T E ++ FE +GPI+ +RLV D T K +GYAF
Sbjct: 37 HDPSQDPQIRGSARRTVFVGRLDFVTNEETLRTTFERFGPIRHLRLVRDIVTGKSKGYAF 96
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY H D AAY+ G+ +D RVLV++ER RT+ W PRRLGGGLG + G+
Sbjct: 97 VEYEHESDAHAAYRDMHGKDIDQARVLVEMERERTMAGWVPRRLGGGLGGKKESGQ---I 153
Query: 244 RYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD 303
R+ GR++ P R P R + + + R G S ERG R+ ERE S +L+H R RD
Sbjct: 154 RFGGRDR-PWRQPLRFNQ--LAQQRGG-----MSGERG-GRQAEREASEDLAH---RQRD 201
Query: 304 HRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRG 344
+ DR R+RE RG ER RD GR G
Sbjct: 202 RGQEAEGGDR-----RQREEQRGLER-------RDSGRGEG 230
>gi|302917047|ref|XP_003052334.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
gi|256733273|gb|EEU46621.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
Length = 431
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 111/225 (49%), Gaps = 45/225 (20%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + +PP P+ RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPPDHAPQNRKTAPISGVAQFLPELQKYKETDVYNPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + K LE E + K Y P+ DPNV GD +KTL VARLSY+ E +++E
Sbjct: 65 ARDRKKQEKKQDLE---ELVTQAPKLYKPNEDPNVRGDAFKTLIVARLSYDADERDLEKE 121
Query: 158 FESYGPIKRVRLVTDKETN-KP-------RGYAFIEYMHTRDMKAAYKQA---------- 199
F +GPI+R+R++ D + KP RGYAF+ + +DM+ QA
Sbjct: 122 FGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKDMRERGPQACPFFKVYGET 181
Query: 200 ------------------DGRKLDG--RRVLVDVERGRTVPNWRP 224
RK+ RR+ VDVERGRTV WRP
Sbjct: 182 QGPSSLPVSAIPFLLSTHSARKVLFMDRRIKVDVERGRTVKGWRP 226
>gi|302497287|ref|XP_003010644.1| hypothetical protein ARB_03345 [Arthroderma benhamiae CBS 112371]
gi|291174187|gb|EFE30004.1| hypothetical protein ARB_03345 [Arthroderma benhamiae CBS 112371]
Length = 410
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 32/207 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKE---TNKPRGYAFIEYMHTRDMK--------------AAYKQAD 200
F R++ ++ T P Y+ +Y + + +K AAYK+ D
Sbjct: 122 FG--------RVLNPEQSFSTPFPIPYSTYKYSYDKVIKYMTNAIDRSCVTTTAAYKETD 173
Query: 201 GRKLDGRRVLVDVERGRTVPNWRPRRL 227
G ++ RR LVDVERGRTV W+PRR
Sbjct: 174 GIRIKDRRALVDVERGRTVKGWKPRRF 200
>gi|302666780|ref|XP_003024986.1| hypothetical protein TRV_00848 [Trichophyton verrucosum HKI 0517]
gi|291189065|gb|EFE44375.1| hypothetical protein TRV_00848 [Trichophyton verrucosum HKI 0517]
Length = 411
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 31/206 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRD----------------MKAAYKQADG 201
F R++ ++ P + Y ++ D AAYK+ DG
Sbjct: 122 FG--------RVLNPEQPLHPLPIPYSTYKYSYDKVIKYMTNAIDRSCVTTTAAYKETDG 173
Query: 202 RKLDGRRVLVDVERGRTVPNWRPRRL 227
++ RR LVDVERGRTV W+PRR
Sbjct: 174 IRIKDRRALVDVERGRTVKGWKPRRF 199
>gi|449459836|ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
Length = 333
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDPH DP V GDPY TLFV RLS+ TTE ++R YG +K +RLV T RGYAF
Sbjct: 47 YDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAF 106
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY ++M+ AYK A +D ++VD R R + W PRRLGGGLG + G+
Sbjct: 107 VEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQ---L 163
Query: 244 RYSGREQEPSRGPSR 258
R+ GRE+ P R P R
Sbjct: 164 RFGGRER-PFRAPLR 177
>gi|431912140|gb|ELK14278.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pteropus
alecto]
Length = 246
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 122/228 (53%), Gaps = 30/228 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P ++ D++ RE RD+ RPR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKTDQY--------REGKRDKRERSRSRERHWESRPR 199
Query: 301 DRDHRDDRHHRDRDR-------TRDRERERD------RGRERDRDRTR 335
DRDH R R ++R D ERERD +GRE+ RDR++
Sbjct: 200 DRDHDRGREKRWQEREPPRVWPESDWERERDFRDDRVKGREK-RDRSK 246
>gi|73995146|ref|XP_534648.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Canis lupus familiaris]
Length = 246
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 114/211 (54%), Gaps = 34/211 (16%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGLSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED----------------------RHGDRDRERSR 278
R+ GR++ P R P P I+ D R DRD +R+R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PIIKNDQYREGKREKRERSRSRERHWDSRTRDRDHDRNR 207
Query: 279 ERGRDREREREKS-LELSHDRPRDRDHRDDR 308
E+ R +ERE S + L D R+RD RDDR
Sbjct: 208 EK---RWQEREPSRVWLESDWERERDFRDDR 235
>gi|255577755|ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
Length = 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DP V GDP+ TLFV RLS+ TTE+ + + YG ++ +RLV D T RGYAF
Sbjct: 47 YDPLGDPKVIGDPFCTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAF 106
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY R+M+ AY A +D ++VD R + +P W PRRLGGGLG + G+
Sbjct: 107 VEYGTEREMRRAYMDAHHSFIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---L 163
Query: 244 RYSGREQEPSRGPSRSA 260
R+ GRE+ P R P +S
Sbjct: 164 RFGGRER-PFRAPLQSV 179
>gi|156836695|ref|XP_001642396.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112914|gb|EDO14538.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 18/192 (9%)
Query: 49 LFEPRAPLEY-----KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRA 103
L +PRAPL++ P +++ P ++G++ +S+ D + PV +++
Sbjct: 15 LMKPRAPLKFLKQSDNPLNQRKTNPNISGVSSLLSN-NTLTDYMNEFPVGTDNKHLQKYE 73
Query: 104 RIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIKREFESYG 162
+ ++ + K +EL K++P+NDPNV DPY+T+FV RL Y+ E +++ F +G
Sbjct: 74 LVRNQKINE-LNKLDDELMKWNPNNDPNVKDTDPYRTIFVGRLPYDVNEMDLQKLFNKFG 132
Query: 163 PIKRVRLVTDKET-------NKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVD 212
I++VR+V DK+T RGYAFI + K A K+ G +++GR +VD
Sbjct: 133 QIEKVRIVRDKKTITKTNPLGNSRGYAFIVFADQLSSKMACKEIGVHRGIEINGRNCIVD 192
Query: 213 VERGRTVPNWRP 224
+ERGRTV ++P
Sbjct: 193 IERGRTVKYFKP 204
>gi|401889211|gb|EJT53150.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 2479]
gi|406698908|gb|EKD02129.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 8904]
Length = 334
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
PYKTLF++RLS + TE+ ++ EFE YG I+++R+V DK K R YAFI + RDMKAA
Sbjct: 133 PYKTLFISRLSSKATEADLRHEFEMYGHIEKIRIVRDKRKGKSRNYAFIVFERERDMKAA 192
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
YK ADG + +++LVDVERGRTV W+PR+L
Sbjct: 193 YKDADGIPIHHKKILVDVERGRTVKGWKPRKL 224
>gi|346327421|gb|EGX97017.1| U1 small nuclear ribonucleoprotein [Cordyceps militaris CM01]
Length = 462
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 109/246 (44%), Gaps = 71/246 (28%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + P PEKRK + G+A F+ + + P E
Sbjct: 5 LPPNLLALFAPRPPLRWVEPADHAPEKRKTAHVDGLAAFLPDLKAYKENDKSVPTESWLE 64
Query: 98 PVERRARIHKLRLEKGAEKAAEEL-----KKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
+R+ +LEK A A EEL K Y P+ DP + GD +KTL VARLSYE E
Sbjct: 65 ARDRK------KLEKKA--AVEELSTNAPKYYKPNEDPLIRGDAFKTLIVARLSYEADER 116
Query: 153 KIKREFESYGPIKRVRLVTDKET-------NKP-RGYAFIEYMHTRDMK----------- 193
++REF +GPI+R R+V D KP RGYAF+ + +DM+
Sbjct: 117 DLEREFGRFGPIERTRIVVDTHAAEKGNKKKKPHRGYAFVVFEREKDMRELWPSSLPSLP 176
Query: 194 -----------------------------------AAYKQADGRKLDGRRVLVDVERGRT 218
AA DG ++ RR+ VDVERGRT
Sbjct: 177 DVRNETFTALKLACLCNHLVSLPLSNTLDQVLYIAAALDACDGIRIKDRRIKVDVERGRT 236
Query: 219 VPNWRP 224
V W+P
Sbjct: 237 VKGWKP 242
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 27/199 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PE--KRKCPPLTG----MAQFVSHFAEPGDPLYAPPV 92
+++ +LF+P PL YK P PE +R P +T +AQ + E D
Sbjct: 8 FPSDVTRLFKPNPPLPYKRPSDYPEEQRRTNPNITPVSNYLAQLTDYINEYSD------- 60
Query: 93 EKAETP---VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-SGDPYKTLFVARLSYE 148
TP +E I +L+ E EL+K+DP ND N + DPYKT+F+ RL Y
Sbjct: 61 ---GTPNKHLEAYEEIRTSQLQ-NLEYLHNELQKWDPMNDVNSQNTDPYKTIFIGRLPYN 116
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLD 205
TE ++++ F +G I+++R+V D +T+KP+GY FI + K A ++ G +++
Sbjct: 117 VTEIELQKIFIKFGEIEKIRIVKDIKTDKPKGYGFILFNEANAAKMAVREIGTHRGIEIN 176
Query: 206 GRRVLVDVERGRTVPNWRP 224
GR +VD+ERGR+V ++P
Sbjct: 177 GRSCIVDIERGRSVKYFKP 195
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ GR +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKGRVCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
KY P + V+GD TLF+ RLS ET + F YG ++ RLV D T RGYA
Sbjct: 41 KYKP--NKQVAGDAGCTLFIGRLSKETRAETLVEAFSKYGEVENCRLVRDFVTGFSRGYA 98
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
F+E+ D K AY++ +DG+ +LV+ E GR + W PRRLGGG G + G+
Sbjct: 99 FVEFKERWDAKTAYREISKCCIDGQEILVEFEAGRNLEGWIPRRLGGGFGGKKESGQ--- 155
Query: 243 QRYSGREQEPSRGP 256
R+ GR++ P R P
Sbjct: 156 LRFGGRDR-PFRRP 168
>gi|300175328|emb|CBK20639.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLF+ LSY T E++++ E YGPI+ + +V D + K RGYAF+EY ++ DM AYK+
Sbjct: 3 TLFIGNLSYLTQENRLRELCEKYGPIESLVIVKDHD-GKSRGYAFVEYTYSNDMTTAYKR 61
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
LD R+++VDVERGRTV W P RLGGGLG TR
Sbjct: 62 LRRHPLDERKLIVDVERGRTVRKWLPARLGGGLGKTR 98
>gi|392876104|gb|AFM86884.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 131 NVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTR 190
VSGDP+ TLFVARL+ +TTE K++ F +G ++R+RLV D T + Y FIEY R
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREER 104
Query: 191 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
+ A++ A+ +D + VD E R + W PRR GGGLG + G+ R+ GR++
Sbjct: 105 SLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGGGLGGKKESGQ---LRFGGRDR 161
Query: 251 EPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH 310
P R P + E + G +R SRER +D + R
Sbjct: 162 -PFRKPIHLPALYV-EGQVGKPERAGSRERFKDGWQRDRDRDRDRDRDRDRDRDRQRERG 219
Query: 311 RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER 359
R+R + +RD RER+R R++D R+H+R RE DR + +
Sbjct: 220 RERGGRDEGREKRDGERERERYRSKD--------REHKRHREGDRHQHK 260
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 22/191 (11%)
Query: 48 KLFEPRAPLEYKPP----PEKRK---CPPLTGMA---QFVSHFAEPGDPLYAPPVEKAET 97
KLF PR PL+YK P PEKR+ PL+ + V + E ++K E
Sbjct: 14 KLFNPRPPLQYKKPVDYPPEKRRTHFIAPLSSLVFSDTLVRYMQEHPQGSENRHLDKYEE 73
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIKR 156
AR +L LE AE+A K+ P D N++ DP++T+FV RL YE E ++++
Sbjct: 74 VRSLTARNERL-LE--AEQA-----KWVPEEDSNINDTDPFRTIFVGRLPYEVDELELQK 125
Query: 157 EFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDV 213
+F +G I+RVR+V DK TN+P+GYAF+ + T + AY++ G + GR V+VD+
Sbjct: 126 QFIKFGDIERVRIVRDKLTNEPKGYAFVLFKDTEGSRKAYREIGVHRGLLIKGRPVIVDI 185
Query: 214 ERGRTVPNWRP 224
ERGRTV ++P
Sbjct: 186 ERGRTVKFFKP 196
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 114/222 (51%), Gaps = 21/222 (9%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP D GDPY TLFV RLS+ TTE ++ YG IK +RLV T RGY F
Sbjct: 44 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGF 103
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY ++M AY+ A +DGR ++VD R + +P W PRRLGGGLG + G+
Sbjct: 104 VEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---L 160
Query: 244 RYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERG---RDREREREKSLELSHDRPR 300
R+ GR++ P R P +R+ DR+ E RE+ R+ E + SL H
Sbjct: 161 RFGGRDR-PFRAP-------LRKGSVSDREEEYYREKSSVEREEEFKERSSLRSYH---- 208
Query: 301 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRD 342
HR H R R ++RE + RE R ++R RG +
Sbjct: 209 --SHRSSAHTHSSHRRRSKDRE-ECSREESRSDRKERARGME 247
>gi|335301144|ref|XP_003359137.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like isoform 1 [Sus scrofa]
Length = 246
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D+ H D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRQPINL--PVVKNDQFREGKRERRERSRSRERHWDSRMRDRGHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
D R +ERE + + D R+RD RDDR
Sbjct: 208 DKRWQEREPARVWPEGDWERERDFRDDR 235
>gi|63100588|gb|AAH95150.1| Snrnp70 protein [Danio rerio]
Length = 141
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 85/134 (63%), Gaps = 8/134 (5%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRVRLV 170
EFE YGPIKR+ +V
Sbjct: 122 EFEVYGPIKRIYIV 135
>gi|242045290|ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G + +A+ P+ A ++ + A + L + YDP D
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRAL--------ICSQAGLYDPFGD 52
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P SGDPY T+FV RLS +T + +++ YG +K +RLV D T RGYAF+EY
Sbjct: 53 PKASGDPYCTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETD 112
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
R+M+ AY+ A +DG V+VD R + +P W PRRLGGGLG + G+ R+ GRE
Sbjct: 113 REMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQ---LRFGGRE 169
Query: 250 QEPSRGPSR 258
+ P R P R
Sbjct: 170 R-PFRAPLR 177
>gi|410976458|ref|XP_003994637.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Felis catus]
Length = 246
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D+ H D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDQYREVKREKRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPESDWERERDFRDDR 235
>gi|402590301|gb|EJW84232.1| hypothetical protein WUBG_04858, partial [Wuchereria bancrofti]
Length = 156
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RK P ++G+++++ F +P D PP ET ERRAR K + E A K + + +
Sbjct: 32 RKRPKMSGLSEYIHLFEDPKD---TPPKPVYETKEERRARRRKEKEELLAYKIEQGIATW 88
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFI 184
+P +P+ + DPYKTLFVAR++YET+ESK++REFE +G I R+ LV DK KPRGYAFI
Sbjct: 89 NPAQNPSATADPYKTLFVARINYETSESKLRREFEQFGKITRLALVHDKN-GKPRGYAFI 147
Query: 185 EYMHTRDM 192
EY H M
Sbjct: 148 EYQHKESM 155
>gi|170583875|ref|XP_001896768.1| RNA binding protein [Brugia malayi]
gi|158595926|gb|EDP34382.1| RNA binding protein, putative [Brugia malayi]
Length = 189
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 99/152 (65%), Gaps = 8/152 (5%)
Query: 45 NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
NLL LFE R PL YKPPP+ RK P ++G+++++ F +P D PP E+ E
Sbjct: 35 NLLALFEARPPLPYKPPPDDLLIDRKRPKMSGLSEYIHLFEDPKD---TPPKPVYESKEE 91
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR K + E A K + + ++P +P+ + DPYKTLFVAR++YET+ESK++REFE
Sbjct: 92 RRARRRKEKEELLAYKIEQGIATWNPAQNPSATTDPYKTLFVARINYETSESKLRREFEQ 151
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDM 192
+G I R+ LV DK KPRGYAFIEY H M
Sbjct: 152 FGKITRLALVHDKN-GKPRGYAFIEYQHKESM 182
>gi|387914692|gb|AFK10955.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Query: 131 NVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTR 190
VSGDP+ TLFVARL+ +TTE K++ F +G ++R+RLV D T + Y FIEY R
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREER 104
Query: 191 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 250
+ A++ A+ +D + VD E R + W PRR GGGLG G +E Q G
Sbjct: 105 SLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGGGLG----GKKESGQLRLGGRD 160
Query: 251 EPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH 310
P R P + E + G +R SRER +D + R
Sbjct: 161 RPFRKPIHLPALYV-EGQVGKPERAGSRERFKDGWQRDRDRDRDRDRDRDRDRDRQRERG 219
Query: 311 RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
R+R + +RD RER+R R++D R+H+R RE DR
Sbjct: 220 RERGGRDEGREKRDGERERERYRSKD--------REHKRHREGDR 256
>gi|149720723|ref|XP_001498122.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Equus caballus]
Length = 246
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 112/206 (54%), Gaps = 24/206 (11%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHG----------------DRDRERSRERGRD- 283
R+ GR++ P R P + + R G R R+R +RGR+
Sbjct: 153 --LRFGGRDR-PFRKPINLPVVKNEQYREGKREKRERSRSRERHWDSRTRDRDHDRGREK 209
Query: 284 REREREKS-LELSHDRPRDRDHRDDR 308
R +ERE + + D R+RD RDDR
Sbjct: 210 RWQEREPTRVWPESDWERERDFRDDR 235
>gi|149055934|gb|EDM07365.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 148
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 8/130 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKR 166
EFE YGPIKR
Sbjct: 122 EFEVYGPIKR 131
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRXCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|168024474|ref|XP_001764761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684055|gb|EDQ70460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DPN GDPY +LFV RLS +T E + + +G IK +RLV T GYAF
Sbjct: 46 YDPLGDPNAKGDPYCSLFVGRLSTQTDEKSLHKAMSKFGRIKSLRLVRHIVTGASCGYAF 105
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+E+ ++M AY+ A KLDG +LVD R + +P W PRRLGGGLG + G+
Sbjct: 106 VEFETEKEMYMAYEGAHLSKLDGASILVDYNRQQLMPGWIPRRLGGGLGGKKESGQ---L 162
Query: 244 RYSGREQEPSRGPSR 258
R+ GR++ P R P R
Sbjct: 163 RFGGRDR-PFRAPLR 176
>gi|355564803|gb|EHH21303.1| hypothetical protein EGK_04324, partial [Macaca mulatta]
gi|355759389|gb|EHH61611.1| hypothetical protein EGM_19603, partial [Macaca fascicularis]
Length = 247
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 37 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 95 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 153
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 154 --LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRERSRSRERHWDSRTRDRDHDRGR 208
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + L +D R+RD RDDR
Sbjct: 209 EKRWQEREPTRLWPDNDWERERDFRDDR 236
>gi|109099573|ref|XP_001089715.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Macaca mulatta]
Length = 246
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + L +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRLWPDNDWERERDFRDDR 235
>gi|281343806|gb|EFB19390.1| hypothetical protein PANDA_000935 [Ailuropoda melanoleuca]
Length = 247
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 95 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 153
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D+ H D R R+R +RGR
Sbjct: 154 --LRFGGRDR-PFRKPINL--PIVKNDQYREGKREKRERSRSRERHWDSRTRDRDHDRGR 208
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R ++RE + + D R+RD RDDR
Sbjct: 209 EKRWQDREPARVWPESDWERERDFRDDR 236
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKBRVCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|301754651|ref|XP_002913143.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ailuropoda melanoleuca]
Length = 246
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D+ H D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PIVKNDQYREGKREKRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R ++RE + + D R+RD RDDR
Sbjct: 208 EKRWQDREPARVWPESDWERERDFRDDR 235
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFI 184
DP D GDPY TLFV RLS+ TTE I+ YG IK +RLV T RGYAF+
Sbjct: 51 DPSGDSKAIGDPYCTLFVGRLSHHTTEDTIREVMSKYGWIKNLRLVRHIVTGASRGYAFV 110
Query: 185 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR 244
EY ++M AY+ A +DGR V+VD R + +P W PRRLGGGLG + G+ R
Sbjct: 111 EYETEKEMLCAYEDAHHSLIDGREVIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---LR 167
Query: 245 YSGREQEPSRGPSR 258
+ GR++ P R P R
Sbjct: 168 FGGRDR-PFRAPLR 180
>gi|344297375|ref|XP_003420374.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Loxodonta africana]
Length = 259
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 120/221 (54%), Gaps = 32/221 (14%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKDERSLLNAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSQSRERHWDSRPRDRDHDRGR 207
Query: 283 D-REREREKSLELS-HDRPRDRDHRDD----RHHRDRDRTR 317
+ R +ERE + +D R+RD RDD R RDR + R
Sbjct: 208 EKRWQEREPARAWPDNDWERERDFRDDRLKGREKRDRSKWR 248
>gi|224133078|ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|222837365|gb|EEE75744.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 4/137 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DP GDPY T+FV RLS+ TTE +++ YG +K +RLV T RGYAF
Sbjct: 47 YDPFGDPKAIGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAF 106
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+E+ R+M+ AYK +D ++VD R + +P W PRRLGGGLG + G+
Sbjct: 107 VEFETEREMRRAYKDGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---L 163
Query: 244 RYSGREQEPSRGPSRSA 260
R+ GRE+ P R P ++
Sbjct: 164 RFGGRER-PFRAPLQTI 179
>gi|119618819|gb|EAW98413.1| U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Length = 278
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|71834616|ref|NP_001025412.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Danio
rerio]
gi|123916690|sp|Q4KMD3.1|U1SBP_DANRE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|68533621|gb|AAH98619.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Danio rerio]
Length = 208
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +TTE K++ F +G I+R+RLV D T +
Sbjct: 35 LARYKPNR--GVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRLRLVRDVVTGFSKR 92
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R +K A++ A+ LD +LVDVE+ RT+P WRPRRLGGG G + G+
Sbjct: 93 YAFIEYKEERSLKRAWRDANKLILDQYELLVDVEQERTLPGWRPRRLGGGQGGQKESGQ- 151
Query: 241 VNQRYSGREQEPSRGP 256
R+ GR++ P R P
Sbjct: 152 --LRFGGRDR-PFRKP 164
>gi|293333112|ref|NP_001169404.1| hypothetical protein [Zea mays]
gi|224029143|gb|ACN33647.1| unknown [Zea mays]
gi|414886248|tpg|DAA62262.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G + +A+ P+ A ++ + A + L + YDP D
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAG--------LYDPFGD 52
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P SGDP++T+FV RLS +T + +++ YG +K +RLV D T RGYAF+EY
Sbjct: 53 PKASGDPHRTVFVGRLSRQTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETD 112
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
R+M AY+ A ++G V+VD R + +P W PRRLGGGLG + G+ R+ GRE
Sbjct: 113 REMHRAYEDAHHSVIEGSEVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQ---LRFGGRE 169
Query: 250 QEPSRGPSR 258
+ P R P R
Sbjct: 170 R-PFRAPLR 177
>gi|365987429|ref|XP_003670546.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
gi|343769316|emb|CCD25303.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
Length = 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 17/195 (8%)
Query: 42 LTANLLKLFEPRAPL-EYKP---PPEKRKCPP-LTGMAQFV-SHFAEPGDPLYAPPVEKA 95
+++++ +F+PR PL +KP P +R+ P +TG+++++ SH Y
Sbjct: 13 ISSDISTIFKPRPPLRHFKPTDYPVHRRRTNPNITGISKYINSHLLS-----YVKEYSTT 67
Query: 96 ETPVERRARIHKLRL-EKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESK 153
T +++ L K A++ E L K++PH DPN+ DPY+T+FV RL Y+ E +
Sbjct: 68 TTTNSEVTENNEVVLGNKIAQENKEALDKWNPHEDPNIKDTDPYRTIFVGRLPYDIDELQ 127
Query: 154 IKREFESYGPIKRVRLVTDK-ETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRV 209
+++ F +G I+++R+V DK NK +GY FI + K A K+ G +++GR
Sbjct: 128 LQKHFLKFGQIEKIRIVRDKFNNNKSKGYGFIVFHDPISSKMACKEIGVHRGLEINGRIC 187
Query: 210 LVDVERGRTVPNWRP 224
+VD+ER RTV +RP
Sbjct: 188 IVDIERSRTVKYFRP 202
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V DK T K +GYAFI + K A+K+ G ++ R +V
Sbjct: 124 QKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRVCIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV + P
Sbjct: 184 DIERGRTVKYFXP 196
>gi|402888045|ref|XP_003907387.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Papio anubis]
Length = 254
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + L +D R+RD RD+R
Sbjct: 208 EKRWQEREPTRLWPDNDWERERDFRDER 235
>gi|31077198|ref|NP_851030.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b
[Homo sapiens]
gi|441630253|ref|XP_004089520.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|52790429|gb|AAH09622.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|55249546|gb|AAH47678.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|62739916|gb|AAH93671.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|85567339|gb|AAI11956.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|312150806|gb|ADQ31915.1| U11/U12 snRNP 35K [synthetic construct]
Length = 251
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 157
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 158 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 212
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 213 EKRWQEREPTRVWPDNDWERERDFRDDR 240
>gi|13027642|ref|NP_073208.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a
[Homo sapiens]
gi|297693357|ref|XP_002823986.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pongo abelii]
gi|332254325|ref|XP_003276277.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Nomascus leucogenys]
gi|395745035|ref|XP_003778201.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pongo abelii]
gi|441630256|ref|XP_004089521.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|74754517|sp|Q16560.1|U1SBP_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein;
Short=U11/U12-35K; AltName: Full=Protein HM-1; AltName:
Full=U1 snRNP-binding protein homolog
gi|1174217|gb|AAA86654.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|1174219|gb|AAA86655.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|32450706|gb|AAH54034.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|48427632|tpg|DAA05495.1| TPA_exp: U11/U12 snRNP 35K [Homo sapiens]
gi|119618818|gb|EAW98412.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|119618820|gb|EAW98414.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|158261277|dbj|BAF82816.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|395846781|ref|XP_003796072.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Otolemur garnettii]
Length = 246
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 123/233 (52%), Gaps = 22/233 (9%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P ++ D + RE R+R RPR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLY--------REGKRERRERSRSRERHWDSRPR 199
Query: 301 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREK 353
DRDH R R ++R R + ER+RD DR +GR++ RDR K
Sbjct: 200 DRDHDRGREKRWQEREPPRMWPEN-DWERERDFREDRLKGREK-----RDRSK 246
>gi|426374580|ref|XP_004054148.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Gorilla gorilla gorilla]
Length = 251
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 157
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 158 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRARDRDHDRGR 212
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 213 EKRWQEREPTRVWPDNDWERERDFRDDR 240
>gi|395745038|ref|XP_002823985.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Pongo abelii]
Length = 251
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|426374582|ref|XP_004054149.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 3 [Gorilla gorilla gorilla]
Length = 251
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRARDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|426374578|ref|XP_004054147.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Gorilla gorilla gorilla]
Length = 246
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRARDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + +D R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|390595574|gb|EIN04979.1| hypothetical protein PUNSTDRAFT_55288 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 170
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPP----VE 93
L NLLKLF+PR PL Y P ++ + + G+A +S E + L A +E
Sbjct: 7 LPPNLLKLFQPRPPLPYARPVDRDIDRVRSKHVDGVAALLSRLQE--ESLNAQNEGKDLE 64
Query: 94 KAETPVERRARIHK---LRLEKGAEK-----AAEELKKYDPHNDPNVSGDPYKTLFVARL 145
+ E P A K LR EK K AA+E Y P DP GDPYKTLF+ARL
Sbjct: 65 EGEEPTFTHAEEVKRQILREEKKKAKTDEFKAAKE--SYKPQEDPEAVGDPYKTLFIARL 122
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
TES ++REFESYG I+RVR+V DK + RGYAFI Y RDMK
Sbjct: 123 HKSATESDLRREFESYGTIERVRIVRDK-NGRSRGYAFIVYERERDMKG 170
>gi|291414264|ref|XP_002723378.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)
[Oryctolagus cuniculus]
Length = 246
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 119/223 (53%), Gaps = 17/223 (7%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAF+EY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFVEYKEERALLRAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPR 300
R+ GR++ P R P P ++ + + RE R+R R R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNELY--------REGKRERRERSRSRERHWDSRAR 199
Query: 301 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDR 343
DR+H R R +DR + R D ER+RD DR RG++R
Sbjct: 200 DREHGRGREKRWQDREQARAWP-DSDWERERDLREDRARGKER 241
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP D GDPY TLFV RLS+ TTE ++ YG IK +RLV T RGY F
Sbjct: 50 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGF 109
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY ++M AY+ A +DGR ++VD R + +P W PRRLGGGLG + G+
Sbjct: 110 VEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---L 166
Query: 244 RYSGREQEPSRGPSR 258
R+ GR++ P R P R
Sbjct: 167 RFGGRDR-PFRAPLR 180
>gi|432094892|gb|ELK26300.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Myotis
davidii]
Length = 246
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LAQYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLLRAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRH 269
R+ GR++ P R P P I+ D++
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVIKSDQY 176
>gi|154305179|ref|XP_001552992.1| hypothetical protein BC1G_08884 [Botryotinia fuckeliana B05.10]
Length = 208
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 27/170 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFV---SHFAEPGDPLYAPPVEK 94
L NLL LF PR PL + PP PE RK ++G+A F+ + E D Y P
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDD--YQP---- 58
Query: 95 AETPVERRARIHKLRLEKGA--EKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTE 151
E+ ++R+ R+ +LEK A E +E K + P DPN+ GD +KTL V+RL Y+ TE
Sbjct: 59 TESWLQRKDRV---KLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATE 115
Query: 152 SKIKREFESYGPIKRVRLVTD--------KETNKPRGYAFIEYMHTRDMK 193
++REF +GPI+R+R+V D K+ K RGYAF+ + +DM+
Sbjct: 116 KDLEREFGRFGPIERIRIVVDTHQHEKPGKKVKKHRGYAFVVFEREKDMR 165
>gi|410047484|ref|XP_003952396.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan troglodytes]
Length = 246
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + ++ R+RD RDDR
Sbjct: 208 EKRWQEREPTRVWPDNEWERERDFRDDR 235
>gi|426247194|ref|XP_004017371.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Ovis aries]
Length = 245
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 110/207 (53%), Gaps = 27/207 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGDRDRERSRERGRD 283
R+ GR++ P R P P ++ D+ H D +RGR+
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRERSRSRERHWDSRMRDHHDRGRE 207
Query: 284 -REREREKSLELSH-DRPRDRDHRDDR 308
R +ERE + D R+RD RDDR
Sbjct: 208 KRWQEREAARAWPEGDWERERDFRDDR 234
>gi|332840730|ref|XP_001169924.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pan troglodytes]
Length = 251
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 99 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 157
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 158 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 212
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + ++ R+RD RDDR
Sbjct: 213 EKRWQEREPTRVWPDNEWERERDFRDDR 240
>gi|444724897|gb|ELW65483.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Tupaia
chinensis]
Length = 246
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 117/216 (54%), Gaps = 31/216 (14%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYAPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ R P P ++ D RH D R RER +RGR
Sbjct: 153 --LRFGGRDRH-FRKPINL--PVVKNDLYREGKRERREPSRSRERHWDSRTRERDHDRGR 207
Query: 283 DR---EREREKSLELSHDRPRDRDHRDDRHHRDRDR 315
+R ERE ++ S D R+RD R+DR R RDR
Sbjct: 208 ERRWQEREPNRAWPES-DWDRERDFREDR-SRGRDR 241
>gi|355721016|gb|AES07125.1| small nuclear ribonucleoprotein 35kDa [Mustela putorius furo]
Length = 245
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 8/149 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRH 269
R+ GR++ P R P P ++ D++
Sbjct: 153 --LRFGGRDR-PFRKPINL--PIVKNDQY 176
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 42/194 (21%)
Query: 70 LTGMAQFVSHFAEPGDPL-YAPPVEKAETPVERRARIHKLRLEKG--------------- 113
+ Q VS PG PL Y PV+ PVE R +K++ G
Sbjct: 1 MIKFPQNVSKLFRPGPPLQYKKPVD---YPVEERKTANKIQSLSGYLGALDTYRSEHPEG 57
Query: 114 -------AEKAAE------------ELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESK 153
A AAE +L ++P DPN++ DPY+T+FV RL + TE +
Sbjct: 58 SENGHLDAYNAAENARQVEAKALNAKLAIWNPDEDPNIADSDPYRTIFVGRLPFAVTEVE 117
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVL 210
+++EF +G I++VR+V DK +NK RGY FI + ++A ++ G ++ GR V+
Sbjct: 118 LQKEFVRFGEIEKVRVVRDKTSNKSRGYGFIMFKDEISARSACREIGVHRGVQIGGRPVI 177
Query: 211 VDVERGRTVPNWRP 224
VD+ERGRTV + P
Sbjct: 178 VDIERGRTVKYFTP 191
>gi|440898320|gb|ELR49845.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial
[Bos grunniens mutus]
Length = 246
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 110/207 (53%), Gaps = 27/207 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 94
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 95 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 153
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGDRDRERSRERGRD 283
R+ GR++ P R P P ++ D+ H D +RGR+
Sbjct: 154 --LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRERSRSRERHWDSRMRDHHDRGRE 208
Query: 284 -REREREKSLELSH-DRPRDRDHRDDR 308
R +ERE + D R+RD RDDR
Sbjct: 209 KRWQEREPARAWPEGDWERERDFRDDR 235
>gi|50305197|ref|XP_452557.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641690|emb|CAH01408.1| KLLA0C08019p [Kluyveromyces lactis]
Length = 301
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 27/199 (13%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKR------KCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
T L +++ KLF PL PP R K LTG++ + H +E +
Sbjct: 18 TKLPSSVSKLFTQGPPL---PPSRVRVRRNQNKKYALTGVSAVLQHVSE---------YK 65
Query: 94 KAETPVE--RRARIHKLRLEKGAEKAAEELKK---YDPHNDPNVSGDPYKTLFVARLSYE 148
KA PV + +++ + + ++ E +KK + P +D N+S DPY+TLFV RL Y
Sbjct: 66 KATHPVSENQHLKVYDEAMNESHKEQEELMKKIQEWHPESDANISSDPYRTLFVGRLHYA 125
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK---LD 205
E ++++ F YG I+ R+V D++ K RGY F+++ D K +++ RK +
Sbjct: 126 VDEVELQKSFVKYGDIESCRIVRDQD-GKSRGYGFVQFTSYEDSKQCFRELGVRKGIEIM 184
Query: 206 GRRVLVDVERGRTVPNWRP 224
GR +VD+ERGRTV ++P
Sbjct: 185 GRTSIVDIERGRTVKFFKP 203
>gi|115495605|ref|NP_001069024.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Bos taurus]
gi|122144781|sp|Q1LZH0.1|U1SBP_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|94534832|gb|AAI16003.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
gi|296478494|tpg|DAA20609.1| TPA: small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
Length = 245
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 110/207 (53%), Gaps = 27/207 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGDRDRERSRERGRD 283
R+ GR++ P R P P ++ D+ H D +RGR+
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRERSRSRERHWDSRMRDHHDRGRE 207
Query: 284 -REREREKSLELSH-DRPRDRDHRDDR 308
R +ERE + D R+RD RDDR
Sbjct: 208 KRWQEREPARAWPEGDWERERDFRDDR 234
>gi|397481850|ref|XP_003812150.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan paniscus]
Length = 307
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 154
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 155 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 213
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 214 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 268
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + ++ R+RD RDDR
Sbjct: 269 EKRWQEREPTRVWPDNEWERERDFRDDR 296
>gi|403292250|ref|XP_003937166.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Saimiri boliviensis boliviensis]
Length = 252
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 29/209 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIE+ R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 99 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 157
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHG-------------------DRDRERSRERG 281
R+ GR++ P R P P ++ D + R R+R +RG
Sbjct: 158 --LRFGGRDR-PFRKPINL--PVVKNDLYNREGKRERRERSRSRERHWDSRTRDRDHDRG 212
Query: 282 RD-REREREKS-LELSHDRPRDRDHRDDR 308
R+ R +ERE + +D R+RD RDDR
Sbjct: 213 REKRWQEREPPRVWPENDWERERDFRDDR 241
>gi|114647660|ref|XP_509463.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 4 [Pan troglodytes]
Length = 307
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 115/208 (55%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 154
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 155 YAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 213
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 214 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 268
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + + ++ R+RD RDDR
Sbjct: 269 EKRWQEREPTRVWPDNEWERERDFRDDR 296
>gi|403292252|ref|XP_003937167.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 247
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 29/209 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIE+ R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHG-------------------DRDRERSRERG 281
R+ GR++ P R P P ++ D + R R+R +RG
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYNREGKRERRERSRSRERHWDSRTRDRDHDRG 207
Query: 282 RD-REREREKS-LELSHDRPRDRDHRDDR 308
R+ R +ERE + +D R+RD RDDR
Sbjct: 208 REKRWQEREPPRVWPENDWERERDFRDDR 236
>gi|348554281|ref|XP_003462954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cavia porcellus]
Length = 246
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 123/227 (54%), Gaps = 28/227 (12%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K++ F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + A++ ADG +D V VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALLKAHRDADGLLIDQHEVFVDFELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED--RHGDRDRERS----------RERGRDRERER 288
R+ GR++ P R P P ++ D R G R+R R R RD +R R
Sbjct: 153 --LRFGGRDR-PFRKPINL--PAVKSDLYREGKRERRERSRSRERHWDFRARDRDHDRGR 207
Query: 289 EKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTR 335
EK R +DR+ D DR RD +R +GRE+ RDR++
Sbjct: 208 EK-------RWQDREQARAWPDGDWDRERDLREDRLKGREK-RDRSK 246
>gi|351698560|gb|EHB01479.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Heterocephalus glaber]
Length = 246
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 114/208 (54%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K++ F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D V VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALLKAYRDADGLVVDQHEVFVDYELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGRRERRERSRSRERHWDFRTRDRDHDRGR 207
Query: 283 D-REREREKSLELS-HDRPRDRDHRDDR 308
+ R +ERE + D R+RD R+DR
Sbjct: 208 EKRWQERELARAWPDSDWDRERDLREDR 235
>gi|296213228|ref|XP_002753186.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Callithrix jacchus]
gi|390468332|ref|XP_003733920.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Callithrix jacchus]
Length = 246
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 113/208 (54%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFV RL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIE+ R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 153 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 207
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + +D R+RD RDDR
Sbjct: 208 EKRWQERELPRVWPENDWERERDFRDDR 235
>gi|296213226|ref|XP_002753185.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Callithrix jacchus]
Length = 251
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 113/208 (54%), Gaps = 28/208 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V GDP TLFV RL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKG 98
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIE+ R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 99 YAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQ- 157
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIRED-----------------RHGD-RDRERSRERGR 282
R+ GR++ P R P P ++ D RH D R R+R +RGR
Sbjct: 158 --LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGR 212
Query: 283 D-REREREKS-LELSHDRPRDRDHRDDR 308
+ R +ERE + +D R+RD RDDR
Sbjct: 213 EKRWQERELPRVWPENDWERERDFRDDR 240
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 103/192 (53%), Gaps = 13/192 (6%)
Query: 38 HPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEK-AE 96
P + +++LF R L++ PEK + LTG++ V F + D PP+E
Sbjct: 1 MPPKFSEEIIQLFRARPKLKFLELPEKPQPQQLTGISS-VLPFIKRED---LPPLESEPL 56
Query: 97 TPVERRARIH-KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
P++++ + K + E+ +K AE ++Y+P + +G+ TLFV+ L E TE +I
Sbjct: 57 LPIDQKHLVRRKQKNEENNQKIAEMKQRYNPRANKACTGNANNTLFVSGLPKEVTEQEIV 116
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK---LDGRRVLVD 212
EF +G +K V LV D +TN+ R Y F+EY + +A ++ A K + +LVD
Sbjct: 117 YEFNPFGRVKTVNLVRDPKTNEQRSYCFVEY----ETEAGFRNALNHKDKFFIKKPLLVD 172
Query: 213 VERGRTVPNWRP 224
ER RT+PNW P
Sbjct: 173 FERARTIPNWIP 184
>gi|389749680|gb|EIM90851.1| hypothetical protein STEHIDRAFT_118087 [Stereum hirsutum FP-91666
SS1]
Length = 180
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 91/170 (53%), Gaps = 18/170 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEP-------GDPLYAP 90
L NLLKLF PR PL Y P +K ++G+ ++ E G+
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDKDIDRVTKKDVSGVGAILASLRENATAGLINGNGESVE 66
Query: 91 PVEKAETPVERRARIHK--LRLEKGAEKAAEELK----KYDPHNDPNVSGDPYKTLFVAR 144
+E+ E PV A K LR E+ +K AE+ K Y P D GDPYKTLF+AR
Sbjct: 67 GMEEGEEPVFTHAEQTKRQLRREERKKKRAEDFKVAKESYKPAEDAEAVGDPYKTLFIAR 126
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
L TE+ I+REFE+YG I+RVR+V DK+ + RGYAF+ Y RDMK
Sbjct: 127 LHKTATETDIRREFETYGTIERVRIVKDKK-GRSRGYAFVVYERERDMKG 175
>gi|21624627|ref|NP_083808.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Mus
musculus]
gi|81916986|sp|Q9D384.1|U1SBP_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|12857850|dbj|BAB31127.1| unnamed protein product [Mus musculus]
gi|27695288|gb|AAH43031.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|34849818|gb|AAH58361.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|148687639|gb|EDL19586.1| RIKEN cDNA 6330548G22 [Mus musculus]
Length = 244
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGRE---QEPSRGPSRSAEP 262
R+ GR+ ++P P EP
Sbjct: 153 --LRFGGRDRPFRKPINLPVVKNEP 175
>gi|149063260|gb|EDM13583.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
gi|149063261|gb|EDM13584.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
Length = 244
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGRE---QEPSRGPSRSAEP 262
R+ GR+ ++P P EP
Sbjct: 153 --LRFGGRDRPFRKPINLPVVKNEP 175
>gi|358339950|dbj|GAA47912.1| U1 small nuclear ribonucleoprotein 70kDa [Clonorchis sinensis]
Length = 166
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 169 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+V ++ T KPRGYAF+E+ H R+M AA K +G+K+DG R+L D+ERGRT P+WRPRRLG
Sbjct: 1 MVKNRLTGKPRGYAFVEFEHEREMHAAVKGLNGKKIDGMRILTDIERGRTRPDWRPRRLG 60
Query: 229 GGLGTTRVGGEE---VNQRYSGREQEPSRG 255
GLG R G E V+ ++ + PS G
Sbjct: 61 KGLGKNRQGPSEKPKVSSKHENGREPPSHG 90
>gi|344302784|gb|EGW33058.1| hypothetical protein SPAPADRAFT_60375 [Spathaspora passalidarum
NRRL Y-27907]
Length = 302
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
N+ KLF P+ P Y PP PE+R + ++ H + + P T +
Sbjct: 10 NIQKLFGPKPPFLYIPPTDYPPEQRSTTAIAPISSIKDHISSYITQYKSEPKPTTSTTI- 68
Query: 101 RRARIHKLRLEKG--AEKAAEELKKYDPHNDPNVSG--------DPYKTLFVARLSYETT 150
+ + R +K E +L ++ NDP + DPY+T+F+ARL Y T
Sbjct: 69 --STVEAFRQKKQRHQESFTRQLAQW---NDPELFAKNEREFMKDPYRTVFIARLDYSVT 123
Query: 151 ESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA--DGRKLDGRR 208
E I F YG I+ +R++ DK K RGY FI + T D K + G L R
Sbjct: 124 ELDISSAFSKYGVIESIRIIRDKN-GKSRGYGFIVFERTNDAKNCVNELCRSGILLKNRH 182
Query: 209 VLVDVERGRTVPNWRP 224
LVD ERGR + NW+P
Sbjct: 183 ALVDFERGRIIRNWKP 198
>gi|367005232|ref|XP_003687348.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
gi|357525652|emb|CCE64914.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
Length = 309
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 27/206 (13%)
Query: 46 LLKLFEPRAPLEYKP----PPEKRKCPP-LTGMAQF-----VSHFAEPGDPLYAPPVEKA 95
+ +LF+P PL++ P KRK P ++G+ Q +S + + E
Sbjct: 12 VARLFKPNPPLKFLKGIDYPMHKRKTNPNISGITQIQNDRSISSIFNEYNIQFPKGSENG 71
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKI 154
V + K++ + E +L +DP+NDPN+ + DPY+T+FV RL Y+ E +
Sbjct: 72 HLKVYNEVKNQKIKEKNSIE---SKLSAWDPNNDPNIINTDPYRTIFVGRLPYDIDEISL 128
Query: 155 KREFESYGPIKRVRLVTDK-----ETNKP-----RGYAFIEYMHTRDMKAAYKQAD---G 201
++ F YG I++VR++ + +N P RGY FI + T K A+K G
Sbjct: 129 QKIFIKYGQIEKVRIIRNSHGKKENSNTPTVGKSRGYGFIVFEDTYSSKMAFKDIGTHKG 188
Query: 202 RKLDGRRVLVDVERGRTVPNWRPRRL 227
+++GR +VD+ERGRTV ++PRRL
Sbjct: 189 IEINGRTCIVDIERGRTVRYFKPRRL 214
>gi|354496379|ref|XP_003510304.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cricetulus griseus]
gi|344258842|gb|EGW14946.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cricetulus
griseus]
Length = 246
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGRE---QEPSRGPSRSAEP 262
R+ GR+ ++P P EP
Sbjct: 153 --LRFGGRDRPFRKPINLPVVKNEP 175
>gi|62078981|ref|NP_001014149.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Rattus
norvegicus]
gi|81910233|sp|Q5U1W5.1|U1SBP_RAT RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|55562850|gb|AAH86435.1| U11/U12 snRNP 35K [Rattus norvegicus]
Length = 244
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRLGGGLG + G+
Sbjct: 94 YAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRLGGGLGGKKESGQ- 152
Query: 241 VNQRYSGRE---QEPSRGPSRSAEP 262
R+ GR+ ++P P EP
Sbjct: 153 --LRFGGRDRPFRKPINLPVVKNEP 175
>gi|401625267|gb|EJS43283.1| snp1p [Saccharomyces arboricola H-6]
Length = 300
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 26/193 (13%)
Query: 48 KLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERR 102
KLF + PL YK P +++ P +TG+A +S+ + + E E
Sbjct: 14 KLFRAKPPLPYKKPTDYPYAKRQTNPNITGVANLLSNSLK----------QYIEEFPEGT 63
Query: 103 ARIHKLRLE-------KGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
A H + E K ++ L+ ++P+ DP++ DPY+T+F+ RL Y E ++
Sbjct: 64 ANNHLQKYEDVKSSKIKNSQLIDRRLQSWNPNVDPHIKDTDPYRTIFIGRLPYNINEIEL 123
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLV 211
++ F +G I+++R+V D+ T + +GYAFI + K A+K+ G +++ R +V
Sbjct: 124 QKHFVRFGEIQKIRIVKDRTTQQSKGYAFIVFKDPISSKMAFKEIGVHRGIQIEDRICIV 183
Query: 212 DVERGRTVPNWRP 224
D+ERGRTV ++P
Sbjct: 184 DIERGRTVKYFKP 196
>gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Length = 179
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+R+RLV D T +G
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
YAFIEY R + AY+ ADG +D + VD E RT+ W PRRL
Sbjct: 94 YAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTLRGWIPRRL 140
>gi|346465439|gb|AEO32564.1| hypothetical protein [Amblyomma maculatum]
Length = 327
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
Query: 113 GAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTD 172
G +A E K H V DP T+FVARLS T E I+ YG IK LV D
Sbjct: 78 GIVRAMEATYKTSKH----VKTDPRVTVFVARLSPATNEDTIREXXXQYGDIKNCHLVRD 133
Query: 173 KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
T + YAFIE+ T+D AA A+ +D ++ VD E+ R +P W PRRLGGG G
Sbjct: 134 VVTGFSKRYAFIEFYDTKDALAACG-ANQLAIDDCKIFVDFEQERVLPGWIPRRLGGGFG 192
Query: 233 TTRVGGEEVNQRYSGREQEPSR----------GPS--RSAEPRIREDRHGDRDRERS--- 277
G +E Q G P R GPS RS EP ++ R
Sbjct: 193 ----GKKESGQLRFGGLDRPFRKPIVLGSSKTGPSDFRSWEPGAPVPSKNNQLPRRHEGH 248
Query: 278 ----RERGRDREREREKSLELSHDRPRDR---DHRDDRHHRDRDRTRDRERERDRGRE 328
R R DR+ E + LS++R R+R DHR+DR +R R E DR R+
Sbjct: 249 CSDYRARDHDRKDEFLRQKRLSYERSRERHKVDHRNDR--PERPYGRPHESSSDRWRQ 304
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRD 191
+ DP TLFV RL+ T+E +++ F YG ++ RLV D T + YAF+EY RD
Sbjct: 48 IKTDPKLTLFVGRLNPTTSEERLREFFAHYGEVRSCRLVRDIITGFSKCYAFVEYYELRD 107
Query: 192 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
AA A+ +D R+ VD ER R +P W PRRLGGG G + G+ R+ GR+
Sbjct: 108 ALAA-NDANQEYIDDYRIFVDFERERVLPGWVPRRLGGGFGGKKESGQ---LRFGGRD 161
>gi|50294956|ref|XP_449889.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529203|emb|CAG62869.1| unnamed protein product [Candida glabrata]
Length = 299
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 119 EELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
++L ++DP +D ++ DPYKT+FV RL Y+T E ++++ F YG I RVR+V DK+ NK
Sbjct: 95 QQLLQWDPLSDNHMRDTDPYKTVFVGRLPYDTDEVQLQKVFAKYGEIVRVRVVRDKQ-NK 153
Query: 178 PRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 224
RGYAF+ + T + + G +++GRR +VD+ERGRT+ ++P
Sbjct: 154 SRGYAFVLFKETDSARVCTRDIGVHRGIQINGRRCIVDIERGRTIKFFKP 203
>gi|171686398|ref|XP_001908140.1| hypothetical protein [Podospora anserina S mat+]
gi|170943160|emb|CAP68813.1| unnamed protein product [Podospora anserina S mat+]
Length = 216
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 22/187 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP PE+RK ++G+A F+ E + Y P E+
Sbjct: 5 LPPNLLALFTPRPPLRWVPPCDKAPEQRKTATISGVADFLPAMEEYKEIPYTP----TES 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E R R + + E + E Y P+ DPN+ GD +KTL VARL Y E ++RE
Sbjct: 61 WLEARDRKQREKKEALEKLLTEGPLNYKPNEDPNIRGDAFKTLIVARLDYNADEKDLERE 120
Query: 158 FESYGPI---KRVRLVTD-----KETNKP---RGYAFIEYMHTRDMK--AAYKQADGRKL 204
F +GPI K++R+V D K KP RGYAF+ Y +DM+ A+ Q
Sbjct: 121 FGRFGPIERSKQIRIVRDTHAHEKPNKKPKPHRGYAFVVYEREKDMRGNIAHIQTILHH- 179
Query: 205 DGRRVLV 211
RRVLV
Sbjct: 180 HVRRVLV 186
>gi|324508872|gb|ADY43741.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 121
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+A++V F +P D PP ET ERRAR K + E A K + + + P +
Sbjct: 1 MSGLAEYVHLFEDPKD---TPPKPIFETKEERRARRRKEKEELLAYKIEQGIATWAPAEN 57
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P + DPYKTLFVAR++YET+ESK++REFE +G I ++ LV D KPRGYAFIEY H
Sbjct: 58 PTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHDP-NGKPRGYAFIEYQHK 116
Query: 190 RDM 192
+M
Sbjct: 117 ENM 119
>gi|47207553|emb|CAF91719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 166 RVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 222
++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV W
Sbjct: 1 QIYIVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 57
>gi|294658365|ref|XP_460701.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
gi|202953076|emb|CAG89041.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
Length = 334
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 44/213 (20%)
Query: 44 ANLLKLFEPRAPLEYKPP---PEKRKCPP-LTGMAQFVSHFAEPGDPLY------APPVE 93
N+ KLF + PL YK P P + +C +T ++ F + + + D L PP+E
Sbjct: 10 INIQKLFAVKPPLVYKTPLDYPAESRCTNHITSVSSFRNQWQQYVDDLVEAEKNQPPPIE 69
Query: 94 KAETPVERRARIHKLRL-EKGAEKAAEELKK-----YDPHNDPNV--------SGDPYKT 139
I ++++ EKG +K +EL+K + NDP + DP+KT
Sbjct: 70 T----------IQQVQIREKGRKK--QELQKSYQLQLNEWNDPELLQKNEQEFMKDPFKT 117
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+F++RL Y TE I + F YG I+ + +V DK++ K RGY F+ + D K K+
Sbjct: 118 VFISRLDYLLTELDISKNFSKYGVIESITIVRDKKSGKSRGYGFVVFERDEDAKGCIKEL 177
Query: 200 --DGRKLD------GRRVLVDVERGRTVPNWRP 224
G K+ R +LVD+ERGR V NW+P
Sbjct: 178 APTGLKIPVENKPFTRTILVDMERGRLVRNWKP 210
>gi|147903467|ref|NP_001090410.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Xenopus
laevis]
gi|123905237|sp|Q05AT9.1|U1SBP_XENLA RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|116063426|gb|AAI23362.1| MGC154877 protein [Xenopus laevis]
Length = 272
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L +Y P+ V+GDP+ TLFV+RLS +TTE K+K F YG IKR+RLV D T +G
Sbjct: 36 LSRYVPNK--GVTGDPHLTLFVSRLSPQTTEEKLKEVFSRYGDIKRIRLVRDFITGFSKG 93
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 240
YAFIEY + A++ A+ +D R V VD E R + W PRR GGG G + G+
Sbjct: 94 YAFIEYKQENAIMKAHRDANKLVIDQREVFVDFELERNLKGWIPRRFGGGFGGKKESGQ- 152
Query: 241 VNQRYSGREQEPSRGP 256
R+ GR++ P R P
Sbjct: 153 --LRFGGRDR-PFRKP 165
>gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
+Y P+ V GDP TLFV+RL+ +TTE K+ F YG I+R+RLV D T + YA
Sbjct: 38 RYKPNK--GVVGDPLLTLFVSRLNPQTTEDKLYEVFSKYGDIRRLRLVRDIVTGFSKRYA 95
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
F+EY R + A + A+ +D V VD E+ RT+ W PRRLGGG G + G+
Sbjct: 96 FVEYKEERSVVRARRDANKIVVDQHEVFVDFEQERTLKGWVPRRLGGGHGGKKESGQ--- 152
Query: 243 QRYSGREQEPSRGPSRSAEPRIRE 266
R+ GR++ P R P ++E
Sbjct: 153 LRFGGRDR-PFRKPINLGLGLMQE 175
>gi|393221008|gb|EJD06493.1| hypothetical protein FOMMEDRAFT_77333 [Fomitiporia mediterranea
MF3/22]
Length = 184
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE--------PGDPLYA 89
L NLLKLF PR PL Y P P++ + + G+A ++ E G
Sbjct: 7 LPPNLLKLFAPRPPLPYIRPVGKDPDRVRAKNVDGVAALLARLKEESTQGLIDAGTQEVP 66
Query: 90 PPVEKAETPV-----ERRARIHKLRLEKGAE---KAAEELKKYDPHNDPNVSGDPYKTLF 141
+E+ E PV E + +I K +K E K A+E+ Y P DP GDPYKTLF
Sbjct: 67 DGMEEGEEPVFTHTEETQRQIRKEERKKAKEDHFKNAKEM--YKPAEDPEAVGDPYKTLF 124
Query: 142 VARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
VARL + E ++R FE YG I+RVR+V DK+ + RGYAFI Y RDMK
Sbjct: 125 VARLKKQAKEIDLRRVFEGYGTIERVRIVRDKK-GRSRGYAFIVYERERDMKGI 177
>gi|260942821|ref|XP_002615709.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
gi|238850999|gb|EEQ40463.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 48 KLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERR- 102
KLF P+ P +K P P +R P +T ++ + S + + E+ + P+ ++
Sbjct: 29 KLFTPKLPFLHKQPIDYPPHERATPVITSISAWKSEIEKYCTEFKSSDEEQKQRPLTKKQ 88
Query: 103 ARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYG 162
R L+ + + AE K D DPYKT+FVARL Y TE + + F YG
Sbjct: 89 LREASLKRQMDDWEDAEAFAKND------FLKDPYKTVFVARLYYSLTELDLSKHFTKYG 142
Query: 163 PIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD--GRKLD-------GRRVLVDV 213
I+ +R++ + ET + RGY FI + D K ++ G +D R++LVD+
Sbjct: 143 TIESIRIIRNTETGQSRGYGFIVFEREADAKNCIRELSPTGLSIDPPSSESKPRKILVDM 202
Query: 214 ERGRTVPNWRP 224
ERGR V NWRP
Sbjct: 203 ERGRLVRNWRP 213
>gi|357154271|ref|XP_003576727.1| PREDICTED: uncharacterized protein LOC100823301 [Brachypodium
distachyon]
Length = 416
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 80/135 (59%), Gaps = 4/135 (2%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP DP +G+PY +FV LS T + +++ YG +K +RLV D T RGYAF
Sbjct: 50 YDPFGDPKATGEPYHMVFVGHLSRFTGDETLRKAMSRYGRVKSMRLVRDIVTGASRGYAF 109
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+EY ++M+ AY+ A +DG V+VD R + +P W PRRLGGGLG + G+
Sbjct: 110 VEYETDKEMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRRLGGGLGGKKESGQ---L 166
Query: 244 RYSGREQEPSRGPSR 258
R+ GRE+ P R P R
Sbjct: 167 RFGGRER-PFRAPLR 180
>gi|392594814|gb|EIW84138.1| hypothetical protein CONPUDRAFT_51126 [Coniophora puteana
RWD-64-598 SS2]
Length = 177
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 88/172 (51%), Gaps = 20/172 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL YK P P + + ++G+A+ +S E D
Sbjct: 7 LPPNLLKLFAPRPPLPYKRPVDRDPGRIRPKHVSGVAEILSKLKEASDNTLINGDGGEGM 66
Query: 90 -----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
P AE + R + + K A+E Y P +D GDPYKTLF++R
Sbjct: 67 EEGEEPTFTLAEETKRQMRREERRKRRTEDFKVAKE--NYKPADDAEAIGDPYKTLFISR 124
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
L TES ++REFESYG I+RVR+V +K + RGYAFI Y RDMK +
Sbjct: 125 LHKAATESDLRREFESYGTIERVRIVRNKN-GRSRGYAFIVYERERDMKGTH 175
>gi|395323376|gb|EJF55850.1| hypothetical protein DICSQDRAFT_72768 [Dichomitus squalens LYAD-421
SS1]
Length = 209
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHFAEP-------------- 83
L NLLKLF PR PL Y P ++ R P + G+ ++ E
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVDGVGSLLASLREAKTQGMMESGSTGDA 66
Query: 84 GDPLYAPPVEKAETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPY 137
GD + E+ E P A K LR E+ K AEE +K Y P DP GDPY
Sbjct: 67 GDGM-----EEGEEPAFTYAEETKRQLRREERKRKKAEEFQKAKDSYKPSEDPEAIGDPY 121
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
KTLF++RL TE+ ++REFE +G I+RVR+V DK + RGYAFI + RDMK Y
Sbjct: 122 KTLFISRLHKNATENDLRREFEGFGSIERVRIVRDK-NGRSRGYAFIVFERERDMKGNY 179
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 58/260 (22%)
Query: 46 LLKLFEPRAPLEY-KP---PPEKRKCPP-LTGMAQFVSHFAEPGDPLYAPPVEKAETP-- 98
+ +LF PL Y KP P EKR+ P +TG+ +++S + K E P
Sbjct: 8 VAELFSRGPPLPYRKPIDYPLEKRRTNPNITGLTKYLSSLHQ----------YKEEFPRG 57
Query: 99 -VERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESK 153
+ R++ K EK +K +++ P DPN++G DPYKT+FV RL Y+TTE
Sbjct: 58 TANKHLRVYEDVKHEKEKEMDKLQLLCEEWKPAEDPNIAGTDPYKTIFVGRLPYDTTELD 117
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVL 210
++ F YG + +VR+V DK +NK RGY F+ + + K ++ G + GR +
Sbjct: 118 LQEIFGKYGAVDKVRVVRDK-SNKSRGYGFVLFADPQASKRTMRETGVHRGIPIKGRTCI 176
Query: 211 VDVERGRT----VPN--------------------WRPRRLGG-----GLGTTRV---GG 238
VD ERGRT P + P R G G G TR G
Sbjct: 177 VDFERGRTNRYFTPRRLGGGLGGRGYTQTPPRSSRFAPLRATGSDHLSGFGATRFTSDNG 236
Query: 239 EEVNQRYSGREQEPSRGPSR 258
E +RY+ +RGPSR
Sbjct: 237 EFRTERYAPSSATAARGPSR 256
>gi|410915752|ref|XP_003971351.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Takifugu rubripes]
Length = 223
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
+Y P+ V GD TLFV+RL+ +TTE K+ F YG I+R+RLV D T + YA
Sbjct: 38 RYKPNK--GVVGDALLTLFVSRLNPQTTEEKLYEVFSKYGDIRRLRLVRDIVTGFSKRYA 95
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
F+EY R + A + A+ +D V VD E+ RT+ W PRRLGGG G + G+
Sbjct: 96 FVEYKEERSVVRARRDANKIVVDQHEVFVDFEQERTLKGWVPRRLGGGHGGKKESGQ--- 152
Query: 243 QRYSGREQEPSRGPSRSAEPRIRE 266
R+ GR++ P R P ++E
Sbjct: 153 LRFGGRDR-PFRKPINLGVGLMQE 175
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
A L D DP ++ P +TLFV RL+ T+ + F YG + + R++ + T +
Sbjct: 23 ALILIPPDAKLDPTITTTPSRTLFVGRLAPSVTQDILADTFRPYGTVLQCRIIVNNITGQ 82
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL------ 231
RGYAF+E D+ AA + G L G+ +LVD E GRTV W PRRLGGGL
Sbjct: 83 SRGYAFVEMESQHDVNAAIRACHGIHLHGQHILVDTEHGRTVTGWIPRRLGGGLGGKKES 142
Query: 232 GTTRVGGEEVNQRYSGREQEPSRG 255
G R GG +Y + + PS G
Sbjct: 143 GQMRFGGRHHPFKYPLQSRLPSTG 166
>gi|238882323|gb|EEQ45961.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 25/203 (12%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQ--------FVSHFAEPGDPLYAPPV 92
N+ KLF+P+ P Y P PEKR P++ ++ S E A P
Sbjct: 11 NIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSIKNEIDKYLTSELPERESKAQAVP- 69
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG--------DPYKTLFVAR 144
+K V+ + + H+ L++ A++ E ++ + N+P + DP++T+F+AR
Sbjct: 70 KKISKIVKHKQKQHEANLKRLAKEKDHE-RQLEEWNNPTLFAKQEREFMKDPFRTVFIAR 128
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD--GR 202
L Y TE I R F YG I+ +R++ DK+ K RGY F+ Y D G
Sbjct: 129 LDYNLTELDISRAFARYGMIESIRIIRDKQ-GKSRGYGFVVYERNTDAMNCVNDLSRTGL 187
Query: 203 KLDGRRVLVDVERGRTVPNWRPR 225
KL R +LVD+ER R + NWRPR
Sbjct: 188 KLGNRPILVDIERSRVLKNWRPR 210
>gi|449704634|gb|EMD44841.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 471
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTD-KETNKPRGYAF 183
DP ++ + +P +T+ V RL +T ES ++R F YG IK++ ++ D K NK GYAF
Sbjct: 10 DPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKDLKGINK--GYAF 67
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 231
+EY H + + A ++A+G +++ + ++V++E+GRT +++P+RLGG +
Sbjct: 68 VEYNHRSEAERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTI 115
>gi|150865863|ref|XP_001385249.2| hypothetical protein PICST_32340 [Scheffersomyces stipitis CBS
6054]
gi|149387119|gb|ABN67220.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 314
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 46 LLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARI 105
+ KLF P+ PL Y + T VS + D E+ + ++++
Sbjct: 12 IQKLFAPKPPLLYLSSSDFAAGQRATASITPVSAWRSEIDKYTVQLKEQDSSSIKKQPTK 71
Query: 106 HKLRLEKGAEKAA---EELK-KYDPHNDPNV--------SGDPYKTLFVARLSYETTESK 153
H+L+ E EK E K + NDP + DPY+T+FV+RL + TE
Sbjct: 72 HQLQEEAAREKQLLKRESFKRQLREWNDPEILHQNEKEFMKDPYRTIFVSRLDFSLTELD 131
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA--DGRKL--DGRRV 209
I + F YG I+ VR++ D T K RGY FI + D ++ + G +L R +
Sbjct: 132 ISKHFSKYGVIESVRIIRDSVTGKSRGYGFIVFEREWDAQSCISEVARTGVRLPQAKRTI 191
Query: 210 LVDVERGRTVPNWRP 224
LVD+ERGR V NWRP
Sbjct: 192 LVDIERGRIVSNWRP 206
>gi|365760179|gb|EHN01919.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 120 ELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
+L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++++ F +G I+++R+V DK T +
Sbjct: 88 KLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKDKITQQS 147
Query: 179 RGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 224
RGYAFI + K A+K+ G ++ + +VD+ERGRTV ++P
Sbjct: 148 RGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIERGRTVKYFKP 196
>gi|401839251|gb|EJT42547.1| SNP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 300
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 120 ELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKP 178
+L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++++ F +G I+++R+V DK T +
Sbjct: 88 KLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEIEKIRIVKDKITQQS 147
Query: 179 RGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 224
RGYAFI + K A+K+ G ++ + +VD+ERGRTV ++P
Sbjct: 148 RGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIERGRTVKYFKP 196
>gi|448516947|ref|XP_003867675.1| U1-70K component of the U1 snRNP [Candida orthopsilosis Co 90-125]
gi|380352014|emb|CCG22238.1| U1-70K component of the U1 snRNP [Candida orthopsilosis]
Length = 300
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 36/206 (17%)
Query: 46 LLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
+ KLF+P+ PL Y PP PE+R P+ ++ + ++ + D E P +R
Sbjct: 12 IQKLFQPKPPLVYIPPTDYPPEERSTLPIAPISNYKNYIKDYLD---------NELP-QR 61
Query: 102 RARI-------HKLRLEKGAEKAAEELKKYDPH----NDPN--------VSGDPYKTLFV 142
+R HK +L K ++ + +D NDP V DPYKT+F+
Sbjct: 62 ESRTFKPEVSEHKKKLLNAQNKRQKQNESFDRQMRDWNDPELLAKNEKEVMKDPYKTVFI 121
Query: 143 ARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD-- 200
ARL Y TE I + F +G I + ++ D + K RGY FI Y D +A +
Sbjct: 122 ARLDYSLTELDISQYFRKFGVIDSILIIRDHQ-GKSRGYGFIVYERDADAQACVSELSRT 180
Query: 201 GRKLDGRRVLVDVERGRTVPNWRPRR 226
G KL R +L+D+ER R NW+PRR
Sbjct: 181 GAKLKERTILIDIERSRVWRNWKPRR 206
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 23/202 (11%)
Query: 45 NLLKLFEPRAPL-EYKP---PPEKRK---CPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
N+ KLF+ + P ++P PPEKR+ P++ + + ++ + P +
Sbjct: 11 NIQKLFQAKPPFPHFEPTDYPPEKRRTASISPISSIKEVINEYLISELPNHEDKSSSKSK 70
Query: 98 PVERRARIHKLRLEKG----AEKAAEELKKYDPHNDPNVSG--------DPYKTLFVARL 145
R + HK + E+ K E ++ D NDP V DP T+F+ARL
Sbjct: 71 KSLRIIK-HKQKQEEAKIRKTAKQKEFQRQLDEWNDPAVFAKLEREFMKDPLCTVFIARL 129
Query: 146 SYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA--DGRK 203
Y TE I + F YG I+ +R++ D + K RGY FI Y D ++ + G K
Sbjct: 130 DYNLTELDISKAFAKYGMIESIRIIRD-QNGKSRGYGFIVYERNTDAQSCVDELCRSGLK 188
Query: 204 LDGRRVLVDVERGRTVPNWRPR 225
L R +LVD+ER R + NW+PR
Sbjct: 189 LGNRTILVDMERSRVLKNWKPR 210
>gi|183229788|ref|XP_001913374.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|169803196|gb|EDS89871.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 372
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTD-KETNKPRGYAF 183
DP ++ + +P +T+ V RL +T ES ++R F YG IK++ ++ D K NK GYAF
Sbjct: 10 DPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKDLKGINK--GYAF 67
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 231
+EY H + + A ++A+G +++ + ++V++E+GRT +++P+RLGG +
Sbjct: 68 VEYNHRSEAERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTI 115
>gi|344230215|gb|EGV62100.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 321
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 44 ANLLKLFEPRAPLEYKPPP-------EKRKCPPLTGMAQFVSHF---------AEPGDPL 87
A + KLF PR PL + PP + P++ A + ++ AE P
Sbjct: 12 AAIQKLFRPRLPLPFIPPTDYASNTRKTASITPISAYALLIRNYVDQELPQIEAERQSPD 71
Query: 88 YAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSY 147
P +AE RR I K R + + EL N+ + DPY+T+FV+RL Y
Sbjct: 72 KTPFQIQAEKTQRRRLDIQKSRQRQLTDWNNPELLL---QNEKDFMKDPYRTVFVSRLDY 128
Query: 148 ETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA--DGRKL- 204
E + + F +GPI+ VR++ T K RGY FI + D K+ ++ G K+
Sbjct: 129 SLGEIDVSKHFSRFGPIESVRIIRSSSTGKSRGYGFIVFEKDTDAKSCIRELAPTGLKIG 188
Query: 205 -DGRRVLVDVERGRTVPNW 222
R +LVD+ERGR V NW
Sbjct: 189 PGSRTILVDMERGRLVRNW 207
>gi|241951514|ref|XP_002418479.1| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223641818|emb|CAX43780.2| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 343
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 25/203 (12%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMA-------QFVSH-FAEPGDPLYAPPV 92
N+ KLF+P+ P Y P PEKR P++ ++ +++S E A P
Sbjct: 11 NIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSLKHEIEKYISQELPERESKASAVP- 69
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG--------DPYKTLFVAR 144
+K V+ + + H+ L++ A+ E ++ + N+P + DP++T+F+AR
Sbjct: 70 KKISKIVKHKQKQHEANLKRLAKDKDHE-RQLEEWNNPTLFAKQEREFMKDPFRTVFIAR 128
Query: 145 LSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD--GR 202
L Y TE I R F YG I+ ++++ DK+ K RGY F+ Y D A G
Sbjct: 129 LDYNLTELDISRAFARYGMIESIKIIRDKQ-GKSRGYGFVVYERNPDAVACVNDLSRTGL 187
Query: 203 KLDGRRVLVDVERGRTVPNWRPR 225
KL R +LVD+ER R + NWRPR
Sbjct: 188 KLGNRPILVDIERSRVLKNWRPR 210
>gi|405972647|gb|EKC37405.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Crassostrea
gigas]
Length = 226
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 122 KKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGY 181
Y P+ D V+GDP T+FV+RL+ +T E ++ +F +G I ++RLV D T RGY
Sbjct: 23 SSYKPNKD--VAGDPNLTVFVSRLNPKTDEDTLESQFSYFGEIHKIRLVRDIITGHSRGY 80
Query: 182 AFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
AF+E+ R A + G ++DG VLVD E RT+P W PRRL
Sbjct: 81 AFVEFKEGRSAVRAERDGHGMEIDGYEVLVDFELERTLPGWVPRRL 126
>gi|339240951|ref|XP_003376401.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
gi|316974884|gb|EFV58354.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
Length = 185
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 127 HNDPN--VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFI 184
H PN V GDP KTLFV RLS +T E+ I + F YG I R+RLV D T + YAF+
Sbjct: 49 HYKPNERVIGDPKKTLFVGRLSLDTVEADIHQLFGRYGKIARIRLVRDIVTGMSKRYAFV 108
Query: 185 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
E+ H RDM A++ A +D +++VD E R + W PRRL
Sbjct: 109 EFKHRRDMDVAWENAHHAIIDSSQIIVDREVERRMEGWIPRRL 151
>gi|221126097|ref|XP_002166019.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Hydra magnipapillata]
Length = 218
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 130 PN--VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
PN V+GDP KT+ V LS T ES IK+ F+ +G I++ RLV D T R YAFIEY
Sbjct: 58 PNKKVTGDPRKTIMVRHLSLTTNESTIKQIFQRFGEIRKCRLVRDIITGNSRCYAFIEYS 117
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
H RD + A ++ +D +V +D E RT+P W P
Sbjct: 118 HERDARHASRETKDLIIDECKVTIDFECSRTLPGWIP 154
>gi|348518549|ref|XP_003446794.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oreochromis niloticus]
Length = 237
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
+Y P+ V GDP TLFV+RL+ +TTE K+ + F YG I+R+RLV D T +GYA
Sbjct: 38 RYKPNK--GVVGDPLLTLFVSRLNPQTTEDKLHKVFSKYGDIQRLRLVRDIVTGFSKGYA 95
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
FIEY R + A + A+ +D V VD E+ RT+ W PRRLGGGLG + G+
Sbjct: 96 FIEYKEERSVVRARRDANKLVVDQHEVFVDFEQERTLKGWVPRRLGGGLGGKKESGQ--- 152
Query: 243 QRYSGREQEPSRGPSRSAEPRIRE---DRHGDRDRERSRERGRDRE-REREKSLELSH 296
R+ GR++ P R P ++E RE R GR+RE R+R ++ E +
Sbjct: 153 LRFGGRDR-PFRKPINLGVDPVQERGGGGGVGGGREWDRPGGRNREDRDRHRTAEWGN 209
>gi|354543650|emb|CCE40371.1| hypothetical protein CPAR2_104090 [Candida parapsilosis]
Length = 302
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 46 LLKLFEPRAPLEYKPP----PEKRK---CPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
+ KLF+P+ P+ + PP PEKR P++ F+ + + P V+K
Sbjct: 12 IQKLFQPKPPIVHIPPTDYPPEKRSTLSISPVSNYKSFIKKYVDNELPQRESRVQKTAMS 71
Query: 99 VERRARIHKLRL-----EKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSYE 148
R+ KL L +K ++ +++ + DP N+ V DPYKT+F+ARL Y
Sbjct: 72 KHRQ----KLLLANDRRKKQSDSFNRQMRDWNDPELLAKNENEVMKDPYKTVFIARLDYT 127
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD--GRKLDG 206
TE I + F YG I + ++ D + RGY FI + D +A + G K+
Sbjct: 128 LTELDISQYFRKYGVIDSISIIRD-HNGRSRGYGFIVFEREADAQACISELSRTGVKMKE 186
Query: 207 RRVLVDVERGRTVPNWRPRR 226
R +LVDVER R NW+PRR
Sbjct: 187 RTILVDVERSRVWRNWKPRR 206
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 130 PN--VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
PN V G+P T+F+ RL++ TE +++ +F +G I RLVTD T PRGYAFIEY
Sbjct: 51 PNRKVKGNPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYS 110
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
+ A ++ G +DG+ +LVD E R + W+PRRL
Sbjct: 111 ARGEALRAIERMHGVTIDGKEILVDEEWERRLEGWKPRRL 150
>gi|190345461|gb|EDK37350.2| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 32/206 (15%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-------- 92
+ KLF PR PL + PP PEKR P++ ++++ + E +A +
Sbjct: 12 TIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQE-----HAQRIREENETTD 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSY 147
ET ++++A+ R AE +++++ DP ++ V DPY TLF+ARL Y
Sbjct: 67 TAVETTLQKQAKARAKRERAQAESFQRQMEEWLDPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 148 ETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ--ADGRKL- 204
+ TE ++ + F +G I +R++ D E K +GY F+ + D ++ + G K+
Sbjct: 127 DVTEVEVSQSFSRFGAIASIRIIRDNE-GKSKGYGFVVFERDTDAATCVRELASTGIKIG 185
Query: 205 ------DGRRVLVDVERGRTVPNWRP 224
R LVD+ER R + NW+P
Sbjct: 186 PESSDRKPRTALVDIERSRVIRNWKP 211
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 58/274 (21%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRD 191
++ D +++V L Y TE I++ F YG I V+++ ++ + Y F+ + + R
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRS 59
Query: 192 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 251
A +GR +DGR V+V+ R R GG R S R
Sbjct: 60 AIDAINDMNGRDIDGRIVVVNEVRTR-------------------GGRSNFGRESFR--- 97
Query: 252 PSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHR 311
R+ ERG D +R R++ + HD+ RD R
Sbjct: 98 ------------------------RNSERGMDWDRGRDRERDYGHDKDHFRD-------R 126
Query: 312 DRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
+ DR+RD +RER+RG ER RD R RDR DR RD +RD E D E++ R +++ +R
Sbjct: 127 NIDRSRDHDRERERGHERARDHDRTRDRFMDRNRDQDRDME---DNEQEHSRNHDQDWER 183
Query: 372 DYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG 405
D+++ D DRDR + D D +H + R+G
Sbjct: 184 DHDI-DWDRDREMNNTNDHDKSGDKDEHSKKRNG 216
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Query: 315 RTRDRERERDRGRERDRDRTRD----RDRGRDRGRDHERDREKDRDKERDRDRTRER--E 368
R +R + DRGR+R+RD D RDR DR RDH+R+RE+ ++ RD DRTR+R +
Sbjct: 98 RNSERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERGHERARDHDRTRDRFMD 157
Query: 369 RDRDYEVGDPDRDRGYSRDRDSDYDR---IDSKHERDRHGERDYDPTDQED 416
R+RD + D ++ +SR+ D D++R ID +R+ + D+D + +D
Sbjct: 158 RNRDQDRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDHDKSGDKD 208
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 11/106 (10%)
Query: 312 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 367
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R+ DR ++R DR R++
Sbjct: 105 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERARDHDRTRDRFMDRNRDQ 162
Query: 368 ERDRDYEVGDPDR--DRGYSRDRDSDYDR---IDSKHERDRHGERD 408
+RD + + R D+ + RD D D+DR +++ ++ D+ G++D
Sbjct: 163 DRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDHDKSGDKD 208
>gi|146419632|ref|XP_001485777.1| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 32/206 (15%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-------- 92
+ KLF PR PL + PP PEKR P++ ++++ + E +A +
Sbjct: 12 TIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQE-----HAQRIREENETTD 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSY 147
ET ++++A+ R AE +++++ DP ++ V DPY TLF+ARL Y
Sbjct: 67 TAVETTLQKQAKARAKRERAQAESFQRQMEEWLDPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 148 ETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ--ADGRKL- 204
+ TE ++ + F +G I +R++ D E K +GY F+ + D ++ + G K+
Sbjct: 127 DVTEVEVSQSFSRFGAIASIRIIRDNE-GKSKGYGFVVFERDTDAATCVRELASTGIKIG 185
Query: 205 ------DGRRVLVDVERGRTVPNWRP 224
R LVD+ER R + NW+P
Sbjct: 186 PESSDRKPRTALVDIERSRVIRNWKP 211
>gi|355721025|gb|AES07128.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 144
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 30 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 84
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 85 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 144
>gi|443707095|gb|ELU02850.1| hypothetical protein CAPTEDRAFT_133662 [Capitella teleta]
Length = 218
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
KY P+ V G+P T+FV RL++ TTE ++ +F+ YG I+ +RL+ D T +GYA
Sbjct: 38 KYKPNK--GVRGNPECTVFVGRLNHSTTEETLEEQFKRYGNIEHIRLIRDIVTGFSQGYA 95
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
F+EY A +A+ +D + ++VD+E RT+P W PRRL
Sbjct: 96 FVEYTEPNAACRASIEANKIVIDDKEIMVDMECERTMPGWVPRRL 140
>gi|448089233|ref|XP_004196749.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|448093471|ref|XP_004197780.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359378171|emb|CCE84430.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359379202|emb|CCE83399.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 44 ANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-KAETP 98
AN+ KLF + P YKPP PE+RK +TG++ + + + L E + ET
Sbjct: 10 ANIQKLFALKPPHVYKPPLDHPPEERKTCHITGLSSWRDVYKQHCSELQIQASEVRPETQ 69
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYD-----PHNDPNVSGDPYKTLFVARLSYETTESK 153
E++ R + R ++ E +L++++ + + DPYKT+F+ARL Y TE
Sbjct: 70 QEQQKRRREERRKQIQESHDRQLREWNDVELLKKQEQELMKDPYKTVFLARLDYSLTELD 129
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA--DGRKLD------ 205
I + YG I +R++ D+E + RGY F+ + D K K+ G K+
Sbjct: 130 ISKHVSKYGVIDSIRIIRDRE-GRSRGYGFVAFERESDAKNCVKELAPTGLKIPVPDKTP 188
Query: 206 GRRVLVDVERGRTVPNWRPRR 226
R +LVD+ERGR V NW+PRR
Sbjct: 189 TRTILVDIERGRLVRNWKPRR 209
>gi|302792637|ref|XP_002978084.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
gi|302826427|ref|XP_002994691.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300137142|gb|EFJ04246.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300154105|gb|EFJ20741.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
Length = 189
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIK--------------REFESYGPIKRVRL 169
YDP D GDPY+TLFV RLS +TTE ++ + YG +K +RL
Sbjct: 46 YDPTGDAKALGDPYRTLFVGRLSRDTTEETLREATFVLHELFDLPLQVMSKYGTVKSMRL 105
Query: 170 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
V T RGYAF+E+ + +D AY+ A +DG +++VD R + + W PRRL
Sbjct: 106 VRHIVTGASRGYAFVEFENEKDFLHAYEAAHNITIDGNQIIVDYNRQQLMRGWIPRRL 163
>gi|432897351|ref|XP_004076429.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryzias latipes]
Length = 220
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
+Y P+ V GDP T+FVARL+ +T+E K+++ F YG IKR+RLV D T +GY
Sbjct: 38 RYKPNK--GVVGDPLLTVFVARLNPQTSEEKLQQIFSKYGDIKRLRLVRDIVTGFSKGYG 95
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
FIEY R + A + A+ +D + VD E+ RT+ W PRRLGGGLG + G+
Sbjct: 96 FIEYKEERSLTRARRDANKLVVDQHELFVDFEQERTLKGWIPRRLGGGLGGKKESGQ--- 152
Query: 243 QRYSGREQEPSRGP-SRSAEPRIREDRHG-----DRDR-ERSRERGR 282
R+ GR++ P R P + A P R G DR+R R +RGR
Sbjct: 153 LRFGGRDR-PFRKPINLGAGPVQDWGRAGSSAWQDRNRHTRDVDRGR 198
>gi|410904251|ref|XP_003965605.1| PREDICTED: nipped-B-like protein B-like [Takifugu rubripes]
Length = 2756
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 136/270 (50%), Gaps = 50/270 (18%)
Query: 239 EEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDR 298
E++N +S Q ++ P+ +EP ++ HG+ D+ R R + +D++RE + ++E + R
Sbjct: 598 EDMNHEHSQSSQPEAQKPTSKSEPHVK---HGE-DKSRDRNKDKDKDREVDINMEDARGR 653
Query: 299 PRDRDHRDDRHHRDRDRT----RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKD 354
++R DR DR+ T RD+ R + + RE DRDR +DRD +DR +D RD+ KD
Sbjct: 654 CKNRQSNKDR---DRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDRNKD--RDKNKD 708
Query: 355 RDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR-------IDSKHERDRHGER 407
RD+ RD ++ R++ +DRD D+D SRDR D DR + ERD++ +R
Sbjct: 709 RDESRDGNKVRDKNKDRDV-----DKDGEESRDRHKDKDRNKETGVGANKNKERDKNKDR 763
Query: 408 DYDPT-------DQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDR----------- 449
D P D+ DRG N E R + D+D +R
Sbjct: 764 DVGPNRNKELSKDKNKDRG-ESKERNKEKERNKA------KAKDEDGERDVGKSRTKDRE 816
Query: 450 YDQMEEDDYRYDRATSESRDKERTRDLDRE 479
D M +D R ++RD+ER R+ D+E
Sbjct: 817 RDAMRSEDRVQVRPVDKNRDRERNREKDKE 846
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 55/262 (20%)
Query: 253 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-- 310
+ P +S E R RE + GD E +R DR + + HD+ D HR+D +H
Sbjct: 549 AEAPKQSQE-RWRESKQGDGKTENNRGHSDDRCLDSARQ---KHDKHSDSHHREDMNHEH 604
Query: 311 --------------------------RDRDRTRDRERERD------RGRERDRDRTRDRD 338
RDR++ +D++RE D RGR ++R +DRD
Sbjct: 605 SQSSQPEAQKPTSKSEPHVKHGEDKSRDRNKDKDKDREVDINMEDARGRCKNRQSNKDRD 664
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK 398
R +G D ++ R K +D+E DRDR ++R+ +D + DRD+ RD D +++
Sbjct: 665 RENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDR---NKDRDKNKDRDESRDGNKV--- 718
Query: 399 HERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDR-----YDQM 453
RD++ +RD D D E+ R D H++ + ++ G N+ D + DR ++
Sbjct: 719 --RDKNKDRDVD-KDGEESR---DRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKE 772
Query: 454 EEDDYRYDRATSESRDKERTRD 475
D DR S+ R+KE+ R+
Sbjct: 773 LSKDKNKDRGESKERNKEKERN 794
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 73/125 (58%), Gaps = 19/125 (15%)
Query: 266 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-------HRDDRHHRDRDRTRD 318
+DR D+D E SR+R +D++R +E + + ++ RD++ +R+ +D+++ R
Sbjct: 723 KDRDVDKDGEESRDRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELSKDKNKDRG 782
Query: 319 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR------------DKERDRDRTRE 366
+ER++ +ER++ + +D D RD G+ +DRE+D DK RDR+R RE
Sbjct: 783 ESKERNKEKERNKAKAKDEDGERDVGKSRTKDRERDAMRSEDRVQVRPVDKNRDRERNRE 842
Query: 367 RERDR 371
++++R
Sbjct: 843 KDKER 847
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 85/151 (56%), Gaps = 22/151 (14%)
Query: 266 EDRHGDRDRERSRERGRD--------REREREKSLELSHDRPRDRDHRDD-----RHHRD 312
+DR+ DRD+ + R+ RD ++R+ +K E S DR +D+D + +++
Sbjct: 697 KDRNKDRDKNKDRDESRDGNKVRDKNKDRDVDKDGEESRDRHKDKDRNKETGVGANKNKE 756
Query: 313 RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD--REKDRDKERDRDRTRERERD 370
RD+ +DR+ +R +E +D+ +DR ++R ++ ER+ + KD D ERD ++R ++R+
Sbjct: 757 RDKNKDRDVGPNRNKELSKDKNKDRGESKERNKEKERNKAKAKDEDGERDVGKSRTKDRE 816
Query: 371 RD-------YEVGDPDRDRGYSRDRDSDYDR 394
RD +V D++R R+R+ D +R
Sbjct: 817 RDAMRSEDRVQVRPVDKNRDRERNREKDKER 847
>gi|391339647|ref|XP_003744159.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Metaseiulus occidentalis]
Length = 186
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
E K+ P P + DP KT+FV RL + TE +++ F G ++ + LV K + +
Sbjct: 28 ETAKFKP---PKLDTDPSKTVFVGRLPLDLTEDRLREVFSGCGTLRNLHLVRHKISRASQ 84
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
GYAF+ + H+ D+ A G ++ G+R+LV+ E GR +P W+P
Sbjct: 85 GYAFLTFKHSADVNRAI-ALHGSEIGGKRILVEREVGRLLPGWKP 128
>gi|260790715|ref|XP_002590387.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
gi|229275579|gb|EEN46398.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
Length = 213
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYA 182
KY P+ V GDP TLFV+ L+ +TTE +++ F +G + R RLV D T + YA
Sbjct: 43 KYRPNK--QVKGDPRCTLFVSNLNPKTTEDSLEKVFSKFGDLVRTRLVRDIVTGYSKRYA 100
Query: 183 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVN 242
FIEY+ + M A+++A +L+ V VDVE RT+ W PRRLGGGLG ++ G+
Sbjct: 101 FIEYVDEKSMWHAHRKAYKMELEQYEVFVDVENSRTLKGWVPRRLGGGLGGSKESGQ--- 157
Query: 243 QRYSGREQEPSRGP 256
R+ GR + P R P
Sbjct: 158 LRFGGRAR-PFRKP 170
>gi|390358352|ref|XP_001182912.2| PREDICTED: uncharacterized protein LOC753629 [Strongylocentrotus
purpuratus]
Length = 413
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 138/282 (48%), Gaps = 35/282 (12%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V DP+ TLFVARL+ ETTE +++ F YG IK+V L+ D T + YAFIE+
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEE 101
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
R + A +AD ++ V VD E T+ W PRRLGGGLG + G+ R+ GR+
Sbjct: 102 RSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRRLGGGLGGKKESGQ---LRFGGRD 158
Query: 250 QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRD-----REREREKSLELSHDRPRDRDH 304
+ P R P R DR +RDR+ ER RD S R +DR+
Sbjct: 159 R-PFRKPIVVQAIR---DRGIERDRDGGIERDRDGGIDRSRDRGVDRDRDSGIRDKDREI 214
Query: 305 RDDR---------------------HHRDRDRTRDRERERDRGRE-RDR-DRTRDRDRGR 341
DR R DR RDRE ERDRGRE RDR D RDR G+
Sbjct: 215 ERDRGRENRDRDRENRDRDRGIERDRDRGIDRDRDREIERDRGRENRDREDTNRDRGIGK 274
Query: 342 DRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 383
++ D E KDR +E D R R RD E + RDRG
Sbjct: 275 EKDTDTEDGEIKDRYREYSTDGDRRTGRYRDRERDNRGRDRG 316
>gi|68486606|ref|XP_712797.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
gi|46434210|gb|EAK93626.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
Length = 305
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
DP++T+F+ARL Y TE I R F YG I+ +R++ DK+ K RGY F+ Y D
Sbjct: 77 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRDKQ-GKSRGYGFVVYERNTDAMN 135
Query: 195 AYKQAD--GRKLDGRRVLVDVERGRTVPNWRPR 225
G KL R +LVD+ER R + NWRPR
Sbjct: 136 CVNDLSRTGLKLGNRPILVDIERSRVLKNWRPR 168
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 122/271 (45%), Gaps = 50/271 (18%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRD 191
++ D +++V L Y TE I++ F YG I V+++ ++ + Y F+ + + R
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRS 59
Query: 192 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 251
A +GR +DGR V+V+ R R GG G E +R S R +
Sbjct: 60 AIDAINDMNGRDIDGRIVVVNEVRTR-----------GGRSNF---GRESFRRNSERGMD 105
Query: 252 PSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHR 311
RG R + +D DR+ +RSR+ R+RER H+R RD H R
Sbjct: 106 WDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERER--------GHERARD-------HDR 150
Query: 312 DRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
RDR DR R++DR E D ++ R+H++D E+D D + DRDR D
Sbjct: 151 TRDRFMDRNRDQDRDME---------DNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDH 201
Query: 372 DYEVGDPDR----------DRGYSRDRDSDY 392
D + GD D RG S D D DY
Sbjct: 202 D-KSGDKDEHSKKRNGGWHSRGLSSDSDGDY 231
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 312 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 367
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R D D+ RDR R R
Sbjct: 105 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERAR--DHDRTRDRFMDRNR 160
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENY 427
++DRD E D ++ +SR+ D D++R H+ D +R+ + T+ D G D H
Sbjct: 161 DQDRDME----DNEQEHSRNHDQDWER---DHDIDWDRDREMNNTNDHDKSGDKDEHSK- 212
Query: 428 EHHRGYGDHDRYNQYHDDDNDRYDQMEEDD 457
R G H R D D D +DQ+EE D
Sbjct: 213 --KRNGGWHSR-GLSSDSDGDYHDQVEEVD 239
>gi|224047904|ref|XP_002196470.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Taeniopygia
guttata]
Length = 479
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +++ EK A+ A L+ D ++ P LFV +L+ TT ++ F +GPI
Sbjct: 208 IEEVQAEKEAKTRAILLEMVGDLPDADIKP-PENVLFVCKLNPVTTGEDLEIIFSRFGPI 266
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
K ++ D +T + YAFIE+ D + AY + D +D RR+ VD + W+
Sbjct: 267 KSCEVIRDWKTGESLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKWKG 326
Query: 225 RRLGGGLGTTRVGGEEVNQRYSGREQE---PSRGPSR-SAEPR--IREDRHGDRDRERSR 278
+ GG + + E+E PS+ + A+P+ + D D D E S
Sbjct: 327 K-----------GGRYTKEDFKDYEKERDKPSKFALKEKAKPKQDAKYDLVLDEDVEESH 375
Query: 279 ER----GRDREREREKSLELSHDRPRDRDHRD-DRHHRDRDRTRDRERERDRGRERDRDR 333
+ +++++ E D R + +D DR H +R R R + ++DR R R R +
Sbjct: 376 TSQSHLAKKQKKKKHHHSEDEDDDKRTKKSKDSDRKHEERCRERSKSEKKDRHRSRSRSQ 435
Query: 334 TRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
RD R + + E R +D DK+ DR R+ ++ +D++
Sbjct: 436 ERDYTYSRQKDKYREDSRVRDWDKKADRSRSPKKSKDKE 474
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 119/264 (45%), Gaps = 50/264 (18%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+++V L Y TE I++ F YG I V+++ ++ + Y F+ + + R A
Sbjct: 60 SIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVG-GKCYGFVTFTNPRSAIDAIND 118
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 258
+GR +DGR V+V+ R R GG G E +R S R + RG R
Sbjct: 119 MNGRDIDGRIVVVNEVRTR-----------GGRSNF---GRESFRRNSERGMDWDRGRDR 164
Query: 259 SAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRD 318
+ +D DR+ +RSR+ R+RER H+R RD H R RDR D
Sbjct: 165 ERDYGHDKDHFRDRNIDRSRDHDRERER--------GHERARD-------HDRTRDRFMD 209
Query: 319 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDP 378
R R++DR E D ++ R+H++D E+D D + DRDR D D + GD
Sbjct: 210 RNRDQDRDME---------DNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDHD-KSGDK 259
Query: 379 DR----------DRGYSRDRDSDY 392
D RG S D D DY
Sbjct: 260 DEHSKKRNGGWHSRGLSSDSDGDY 283
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 312 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 367
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R D D+ RDR R R
Sbjct: 157 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERAR--DHDRTRDRFMDRNR 212
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENY 427
++DRD E D ++ +SR+ D D++R H+ D +R+ + T+ D G D H
Sbjct: 213 DQDRDME----DNEQEHSRNHDQDWER---DHDIDWDRDREMNNTNDHDKSGDKDEHSK- 264
Query: 428 EHHRGYGDHDRYNQYHDDDNDRYDQMEEDD 457
R G H R D D D +DQ+EE D
Sbjct: 265 --KRNGGWHSR-GLSSDSDGDYHDQVEEVD 291
>gi|302766473|ref|XP_002966657.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
gi|300166077|gb|EFJ32684.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
Length = 260
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF 183
YDP D GDPY+TLFV RLS +TTE ++ Y + + + T RGYAF
Sbjct: 46 YDPTGDAKALGDPYRTLFVGRLSRDTTEETLREASLFY--TLSICVSRNAVTGASRGYAF 103
Query: 184 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+E+ + +D AY+ A +DG +++VD R + + W PRRLGGGLG + G+
Sbjct: 104 VEFENEKDFLHAYEAAHNITIDGNQIIVDYNRQQLMRGWIPRRLGGGLGGKKESGQ---L 160
Query: 244 RYSGREQEPSRGPSRSAEPR 263
R+ GR++ P R P R PR
Sbjct: 161 RFGGRDR-PFRAPLRENIPR 179
>gi|440297145|gb|ELP89867.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
invadens IP1]
Length = 388
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-------- 93
L NL LF P P+ PP EK+ P +G++ + E +PP E
Sbjct: 5 LPKNLQSLFIPNEPIATFPPQEKKFYPHYSGISDIFNLIKE------SPPDEATSVLEDP 58
Query: 94 -KAETPVERRARIHKLRLEKG--AEKAAEELKK--YDPHNDPNVSGDPYKTLFVARLSYE 148
K TP+ ++ + L+ K + KA ++ K ++P V+ +P +T+FV + +
Sbjct: 59 KKPFTPIWTKSGLKALKEYKKRDSIKALQDAMKAEWNPTQRTGVTDNPNRTVFVRGVPKD 118
Query: 149 TTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 208
E ++K F +G +K V V +K+ K Y F+E++H D + A ++ D ++ +R
Sbjct: 119 VEEGELKNIFWEFGDVKNVIFVKNKK-GKRVNYCFVEFVHHSDAERAARRGDLMRIGEKR 177
Query: 209 VLVDVERGRTVPNWRPRRLGG 229
V V++ERGR + P ++GG
Sbjct: 178 VNVEMERGRVDDKFLPTKIGG 198
>gi|390355488|ref|XP_790452.3| PREDICTED: uncharacterized protein LOC585534 [Strongylocentrotus
purpuratus]
Length = 405
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 140/274 (51%), Gaps = 27/274 (9%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V DP+ TLFVARL+ ETTE +++ F YG IK+V L+ D T + YAFIE+
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEE 101
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
R + A +AD ++ V VD E T+ W PRRLGGGLG + G+ R+ GR+
Sbjct: 102 RSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRRLGGGLGGKKESGQ---LRFGGRD 158
Query: 250 QEPSRGPSRSAEPRIREDRHGDRDRERSRE---------------RGRDREREREKSLEL 294
+ P R P R DR +RDR+ R +DRE ER++ E
Sbjct: 159 R-PFRKPIVVQAIR---DRGIERDRDEGIGRSRDRGVDRDRDSGIRDKDREIERDRGREN 214
Query: 295 SHDRPRDRDHR---DDRHHRDRDRTRDRERERDRGRE-RDRDRT-RDRDRGRDRGRDHER 349
+RD + R DR RD+ ERDRGRE RDR+ T R+R G+++ D E
Sbjct: 215 RDRDRENRDRDRGIERDRDRGIDRDRDKGIERDRGRENRDREDTDRERGLGKEKDTDTED 274
Query: 350 DREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 383
KDRD+E D R R RD E RDRG
Sbjct: 275 GEIKDRDREYSTDGDRRTGRYRDIERDHRARDRG 308
>gi|195388776|ref|XP_002053055.1| GJ23668 [Drosophila virilis]
gi|194151141|gb|EDW66575.1| GJ23668 [Drosophila virilis]
Length = 530
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + D +D RR+ VD + + WR G G G G R + G
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGIIGADG-----RLDFNNLKERNG 348
Query: 256 PSRSAEPRIREDRHGDRDRERSRER-GRDREREREKSLELSHDRPRDRDHRDDRHHRDRD 314
++P + G +DR R+ ER R ER+K+ EL H +DRD R + R
Sbjct: 349 SGNISQPSKMDSTQGRKDRNRNDERKNRTSLEERKKARELRHQEQKDRDKRARDQYVQRS 408
Query: 315 RTRD 318
R+RD
Sbjct: 409 RSRD 412
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 35/282 (12%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + +L ++T+ S ++ +F+ +G IK V L D T +PRG+ F+E+ +D + A K+
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKE 72
Query: 199 ADGRKLDGRRVLVDV-ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS 257
+G ++DG R+ V V ++GR+ P + GG + ++ +RY +
Sbjct: 73 MNGSEIDGSRIEVFVAQKGRSDPRHMRYKEKGGYAYRKNPDNKIRRRYISKSNS------ 126
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRD--RDHRDDRHHRDRDR 315
R+G R++ R R R +ER R +S S+DR RD R + H + D+
Sbjct: 127 ----------RYGSYSRDKIRRRERSKERFRYRS---SYDRKMSSYRD-RKNYHMKSYDK 172
Query: 316 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 375
RDR +R R R R+ + R RD+ R + R R +R +R+ +Y+
Sbjct: 173 YRDRNHDRSLSR-RSREYRNNTSRYRDKRRYDKYYRSTSRRA------SRHEKRNENYKS 225
Query: 376 GDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDD 417
+S D SD R SKH R H R ++DD
Sbjct: 226 -----KYNHSNDDYSDETRNSSKHSRKEHVSRSISFNSEKDD 262
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
+R +RDR R ER R+RE ER+++ E DR R+ + RD +RDR R+ ER+R+R
Sbjct: 696 NRETERDRNREVERDRNREVERDRNRETERDRNREVE-RDRNRETERDRNREVERDRNRE 754
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 386
ERDR+R RDR R+ GRD R+ E+DR++E ++DR RE E+DR+ E G DR+R R
Sbjct: 755 VERDRNRETGRDRNRETGRDRNREVERDRNREMEKDRNREVEKDRNRETG-RDRNRETGR 813
Query: 387 DRDSDYDR 394
DR+ + DR
Sbjct: 814 DRNREIDR 821
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
Query: 264 IREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRDRERE 322
+ DR+ + +R+R+RE +DR RE EK +R R+R+ DR+ +RDR R+ ER+
Sbjct: 651 VERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNREVERDRNRETERDRNREVERD 710
Query: 323 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR 382
R+R ERDR+R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ E G DR+R
Sbjct: 711 RNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETG-RDRNR 769
Query: 383 GYSRDRDSDYDR 394
RDR+ + +R
Sbjct: 770 ETGRDRNREVER 781
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 10/134 (7%)
Query: 264 IREDRHGDRDRERSRERGRDREREREKSLELSHDRP------RDRDHRDDRHHRDRDRTR 317
I +R+ R R R ER R+RE ER+++ E+ DR R+R+ DR +R+ +R R
Sbjct: 629 IDSERNKKRPRNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDR-NREVERDR 687
Query: 318 DRERERDRGRERDRDRTR--DRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 375
+RE ERDR RE +RDR R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ EV
Sbjct: 688 NREVERDRNRETERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREV 747
Query: 376 GDPDRDRGYSRDRD 389
+ DR+R RDR+
Sbjct: 748 -ERDRNREVERDRN 760
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 11/148 (7%)
Query: 265 REDRHGDRDRERSRERGRDR----EREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE 320
++D H D +E ER + R E ER+++ E+ DR R+ + RD ++DR R+ E
Sbjct: 618 KQDSHIDGQKEIDSERNKKRPRNRETERDRNREVERDRNREVE-RDRNREVEKDRNREVE 676
Query: 321 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDR 380
++R+R ERDR+R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ EV + DR
Sbjct: 677 KDRNREVERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETERDRNREV-ERDR 735
Query: 381 DRGYSRDRDSDYDRIDSKHERDRHGERD 408
+R RDR+ + +R +R+R ERD
Sbjct: 736 NRETERDRNREVER-----DRNREVERD 758
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + +L + T+ S ++ +F+ +G IK V L D T +PRG+ F+E+ +D + A K+
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 199 ADGRKLDGRRVLVDV-ERGRTVP---NWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSR 254
+G +LDG R+ V V ++GR+ P ++ R G G G + + +RY +
Sbjct: 73 MNGSELDGNRIEVFVAQKGRSDPRIMRYKERGGGSGYGHRKYSDNRLKRRYISKSNS--- 129
Query: 255 GPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRD 314
R+G R++ R R + RER R + S++R ++D +++ ++
Sbjct: 130 -------------RYGSYSRDKIRRRDKSRERIRYRD---SYERNMRSSYKDKKNNYMKN 173
Query: 315 RTRDRERERD 324
R R R D
Sbjct: 174 YNRYRSRNYD 183
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + +L Y+T+ S ++ +F+ +G IK V L D T +PRG+ F+E+ +D + A K+
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALKE 72
Query: 199 ADGRKLDGRRVLVDV-ERGRTVPNWRPRRLGGGL 231
+G ++DG RV V V ++GR+ P + GG+
Sbjct: 73 MNGAEIDGNRVEVFVAQKGRSDPRVMRYKEKGGI 106
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + +L Y+T+ S ++ +F+ YG IK V L D T +PRG+ F+E+ +D + A K+
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 199 ADGRKLDGRRVLVDV-ERGRTVP 220
+G ++DG R+ V V ++GR+ P
Sbjct: 73 MNGSEIDGNRIEVFVAQKGRSDP 95
>gi|307109660|gb|EFN57897.1| hypothetical protein CHLNCDRAFT_141933 [Chlorella variabilis]
Length = 505
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 119 EELKKYDPHN-DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
EE + Y P P + KT++V +L Y+T E +++ FE+YG + V+L+ DKET +
Sbjct: 12 EEGETYSPRGYIPRPGHETNKTIYVGQLRYDTDERTVRKWFEAYGTVVTVKLIYDKETGR 71
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 216
+G+ F+ + RD + A A GR LDG + V++ G
Sbjct: 72 SKGFGFVSFEDDRDARDALNDAGGRDLDGAAIKVNIAHG 110
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
DP ++L + L ++T S ++REFE +G I+ V L D + +PRG+ F+EY+ D +A
Sbjct: 10 DPRRSLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARA 69
Query: 195 AYKQADGRKLDGRRVLVDV-ERGRTVP 220
A ++ DG LDG + V + GR P
Sbjct: 70 ALEKMDGATLDGVTINVTFAQEGRKSP 96
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
DP ++L + L ++T S ++REFE +G I+ V L D + +PRG+ F+EY+ D +A
Sbjct: 10 DPRRSLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARA 69
Query: 195 AYKQADGRKLDGRRVLVDV-ERGRTVP 220
A ++ DG LDG + V + GR P
Sbjct: 70 ALEKMDGATLDGVTINVTFAQEGRKSP 96
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
DP ++L + L ++T S ++REFE +G I+ V L D + +PRG+ F+EY+ D +A
Sbjct: 24 DPRRSLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARA 83
Query: 195 AYKQADGRKLDGRRVLVDV-ERGRTVP 220
A ++ DG LDG + V + GR P
Sbjct: 84 ALEKMDGATLDGVTINVTFAQEGRKSP 110
>gi|330922608|ref|XP_003299903.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
gi|311326217|gb|EFQ91998.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 224 EREARAQALTLEMVGDLPFAEV------------APPENVLFVCKLNPVTQDEDLELIFS 271
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG--- 216
+G I ++ DK+T YAFIEY + +D + AY + DG +D R+ VD +
Sbjct: 272 RFGKILSCEVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVLIDDHRIHVDFSQSVSK 331
Query: 217 -----RTVPNWRPRRLGGGLGTTRVGGEEVNQRY---SGREQEPSRGPSRSAEPRIREDR 268
R V N + RR GG G + E ++Y SGR+ + +
Sbjct: 332 IADDWRDVTNKKRRRAAGGFGG--IDNLEKKKQYRDGSGRQ---------IMSDSVVNNL 380
Query: 269 HGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE-RERDRGR 327
DRD + R RE R+ + + R R +++ DD + R R R+ RE R+ D GR
Sbjct: 381 VVDRDVPKDTTTQRPRESGRDTRRDDTRRRERRQEYHDDSYKRKRSRSPTRERRDGDDGR 440
Query: 328 ERDRDRTRDR 337
DR R R R
Sbjct: 441 YNDRRRERSR 450
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 26/230 (11%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F S+G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE--VNQRYSGREQEPS 253
Y + D +D RR+ VD + + WR G G G G+ N R + ++P+
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGDYGKLDFDNLRDNKDRRKPN 353
Query: 254 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 313
G SR RED D+ E R R ER + + R +++ RDDR + R
Sbjct: 354 NGRSR------REDHKEDKRAEDPRHRMSSAERRKAR-----EQRHQEQSERDDRKNV-R 401
Query: 314 DRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDR 363
R+R RE++ E++R R+R+ G R DRE++R++ R R
Sbjct: 402 GRSRSREKQ-----EQNRSRSRNWQNGSVR---EYSDRERNRNERSSRSR 443
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 88/129 (68%), Gaps = 6/129 (4%)
Query: 271 DRDRERSRERGRDRE----REREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
D++ E+ RE+ RD+E RE+++ EL R +D+D ++ +++DR + RE++RD+
Sbjct: 795 DKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKG-QEKDRDKVREKDRDKV 853
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE-VGDPDRDRGYS 385
R++DRD+ R++DR + R +D ++ REKDR+K R+RDR + RE+DRD E V ++D+
Sbjct: 854 RDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKE 913
Query: 386 RDRDSDYDR 394
R +D D +R
Sbjct: 914 RLKDRDKER 922
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 86/134 (64%), Gaps = 14/134 (10%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-----HRDRDRTRDRER 321
DR ++++ R +E+ + R+++R K LE ++ +D++ DR ++ R +D+++
Sbjct: 737 DRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDK 796
Query: 322 ERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK------ERDRDRTRERERDRDYEV 375
E ++GRE+DRD+ ++ R +D+ ++ E+ REKD+DK E+DRD+ RE++RD+ V
Sbjct: 797 ELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDK---V 853
Query: 376 GDPDRDRGYSRDRD 389
D DRD+ +DRD
Sbjct: 854 RDKDRDKVREKDRD 867
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 24/102 (23%)
Query: 263 RIRE---DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDR 319
++RE D+ D+DR++ RE+ RD+ RE +DRD R++DR + R
Sbjct: 844 KVREKDRDKVRDKDRDKVREKDRDKVRE------------KDRDKL-----REKDREKIR 886
Query: 320 ERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR 361
ER+RD+GRE+D RD+++ + R +D E++R KDRDKER++
Sbjct: 887 ERDRDKGREKD----RDKEQVKTREKDQEKERLKDRDKEREK 924
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 23/162 (14%)
Query: 270 GDRDRERSRERGRDREREREKSLELSHD------RPRDRDH---------RDDRHHRDRD 314
G ++ R+ +G + R+ E ELS D R +D D + R +RD
Sbjct: 622 GKAEKIRAEGKGHETSRKHEGRTELSRDCKEERHREKDSDSSKGRRSDTSKSSRVEHNRD 681
Query: 315 RTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
+ +++E+ D+G E+ R++ ++ R ++R +D E+D+EK RDKE ++ R +ER +DR E
Sbjct: 682 KEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKE 741
Query: 375 ---VGDPDRDRGYSRDRDSDYDRI-----DSKHERDRHGERD 408
V D ++ +G + R D ++ D + E+DR +D
Sbjct: 742 QEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQD 783
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 271 DRDRERSRERGRDRE----REREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
D++ E+ RE+ RD+E RE+++ EL R +D+D ++ +++DR + RE++RD+
Sbjct: 795 DKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKG-QEKDRDKVREKDRDKV 853
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R++DRD+ R++DR + R +D ++ REKDR+K R+RDR + RE+DRD E
Sbjct: 854 RDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKE 901
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 86/134 (64%), Gaps = 14/134 (10%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-----HRDRDRTRDRER 321
DR ++++ R +E+ + R+++R K LE ++ +D++ DR ++ R +D+++
Sbjct: 737 DRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDK 796
Query: 322 ERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK------ERDRDRTRERERDRDYEV 375
E ++GRE+DRD+ ++ R +D+ ++ E+ REKD+DK E+DRD+ RE++RD+ V
Sbjct: 797 ELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDK---V 853
Query: 376 GDPDRDRGYSRDRD 389
D DRD+ +DRD
Sbjct: 854 RDKDRDKVREKDRD 867
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 85/141 (60%), Gaps = 24/141 (17%)
Query: 271 DRDRERSRERGRDR--EREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRE 328
+RD+E+ +E+ D+ E+ REK LE D+ R +D +D+++ RD+E E+ R +E
Sbjct: 679 NRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKD-----QEKDQEKGRDKEVEKGRYKE 733
Query: 329 RDRDRTRDRDRGRD----------RGRDHERDREKDRDKERDRDRTRERERDRDYEVG-- 376
R +DR +++++ RD R +D E+ REKD+DKE ++D RE+ +D++ E G
Sbjct: 734 RVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKD--REKNQDKELEKGRE 791
Query: 377 ---DPDRDRGYSRDRDSDYDR 394
D + ++G +DRD + ++
Sbjct: 792 KDQDKELEKGREKDRDKEMEK 812
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 64/102 (62%), Gaps = 24/102 (23%)
Query: 263 RIRE---DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDR 319
++RE D+ D+DR++ RE+ RD+ RE +DRD R++DR + R
Sbjct: 844 KVREKDRDKVRDKDRDKVREKDRDKVRE------------KDRDKL-----REKDREKIR 886
Query: 320 ERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR 361
ER+RD+GRE+D RD+++ + R +D E++R KDRDKER++
Sbjct: 887 ERDRDKGREKD----RDKEQVKTREKDQEKERLKDRDKEREK 924
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 285 EREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRG 344
ER REK + S R R + R +RD+ +++E+ D+G E+ R++ ++ R ++R
Sbjct: 653 ERHREKDSDSSKGR-RSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERV 711
Query: 345 RDHERDREKDRDKERDRDRTRERERDRDYE---VGDPDRDRGYSRDRDSDYDRI-----D 396
+D E+D+EK RDKE ++ R +ER +DR E V D ++ +G + R D ++ D
Sbjct: 712 KDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQD 771
Query: 397 SKHERDRHGERD 408
+ E+DR +D
Sbjct: 772 KELEKDREKNQD 783
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + +L Y+T+ S ++ +F+ +G IK V L D T +PRG+ F+E+ +D + A K+
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 199 ADGRKLDGRRVLVDV-ERGRTVP 220
+G ++DG R+ V V ++GR+ P
Sbjct: 73 MNGSEIDGNRIEVFVAQKGRSDP 95
>gi|189197207|ref|XP_001934941.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980889|gb|EDU47515.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 509
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 257 EREARAQALTLEMVGDLPFAEV------------APPENVLFVCKLNPVTQDEDLELIFS 304
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG--- 216
+G I ++ DK+T YAFIEY + +D + AY + DG +D R+ VD +
Sbjct: 305 RFGKILSCEVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVLIDDHRIHVDFSQSVSK 364
Query: 217 -----RTVPNWRPRRLGGGLGTTRVGGEEVNQRY---SGREQEPSRGPSRSAEPRIREDR 268
R V N + RR GG G + E ++Y SGR+ + ++
Sbjct: 365 IADDWRDVTNKKRRRAAGGFGG--IDNLEKKKQYRDGSGRQ---------IMSDSVVDNL 413
Query: 269 HGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE-RERDRGR 327
DRD + R RE R+ + + R R +++ DD + R R R+ RE R+ D GR
Sbjct: 414 VADRDVPKDTTTQRPRESGRDTRRDDTRRRERRQEYHDDSYKRKRSRSPTRERRDGDDGR 473
Query: 328 ERDRDRTRDR 337
R R R R
Sbjct: 474 YNARRRERSR 483
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + D +D RR+ VD + + WR G G G G + S G
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGDGSQ-----LDFNNLRESNG 348
Query: 256 PSRSAEPRIR--EDRHGDRDRERSRERGRDREREREKSLELSHD---RPRDRDHRDDRHH 310
++PR R EDR G DR DR+R E++ E++ + + R++ HR+ R
Sbjct: 349 KKHESKPRKRGQEDRRGQGDRR------IDRKRNDEQNREITSEERRKAREQRHREQRER 402
Query: 311 RDRDRTRDRERERDR 325
DR R + +R R R
Sbjct: 403 EDRGRRNNTQRSRSR 417
>gi|344280641|ref|XP_003412091.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2-like [Loxodonta africana]
Length = 395
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
LF+ L+ ET E ++ F YG I V LV D+ET K RG+AFI + D KAA +
Sbjct: 10 LFIGGLNPETDEKALEAAFGKYGSIVEVLLVKDRETTKSRGFAFITFESPADAKAAARDM 69
Query: 200 DGRKLDGRRVLV 211
+G+ LDG+ + V
Sbjct: 70 NGKSLDGKTIKV 81
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L YE TE + F YG I + +V DK+T KP+G+AFI Y + + A
Sbjct: 37 VFVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAFICYENQKSTVLAVDNF 96
Query: 200 DGRKLDGRRVLVDVERGRTVP 220
+G K+ GR + VD VP
Sbjct: 97 NGVKIKGRTIRVDHVSNYRVP 117
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 53/248 (21%)
Query: 207 RRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE 266
R +++ E G +V +P G V + +E S +RS+ +
Sbjct: 1059 RSYIIETETGSSVTRAKPAVSGVRTSDVVVLDLSKEDTWGAKELTESIKEARSSG----K 1114
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDR 325
RH D+DR++ RE+ RD++RER + D+ RD+D HRD H R RD+ RDR++E+D+
Sbjct: 1115 SRHKDKDRDKEREKPRDKDRERHR------DKDRDKDSHRDKEHERKRDKDRDRQKEKDK 1168
Query: 326 GRERDRDRT------RDRDRGRDRGRDHERD---REKDRDK---------------ERDR 361
RER +DR +DR+R +DR +D +D REKDRD E+DR
Sbjct: 1169 DRERRKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDR 1228
Query: 362 DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDS--------KHERDR-----HGERD 408
+ RE+E+DRD E ++R + RD +R DS + E+ R G RD
Sbjct: 1229 SKHREKEKDRDRE----KKERSH-RDNKESAERTDSGKKERHRDRDEKKREREKESGSRD 1283
Query: 409 YDPTDQED 416
D + +D
Sbjct: 1284 GDKSSTKD 1291
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 79/112 (70%), Gaps = 6/112 (5%)
Query: 310 HRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERER 369
H+D+DR ++RE+ RD+ RER RD+ RD+D RD+ +HER R+KDRD+++++D+ RER +
Sbjct: 1117 HKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDK--EHERKRDKDRDRQKEKDKDRERRK 1174
Query: 370 DRDYEVG-DPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP-TDQEDDRG 419
DR+ E + DR+R R++DS D+ + E+DR G ++ + + +E DRG
Sbjct: 1175 DREGESSKEKDRERRKDREKDSSKDK--DRREKDRDGRKEREKESSKEKDRG 1224
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 25/144 (17%)
Query: 270 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 329
G++DR + RE+ +DR+RE+ ++R HRD++ +R + +ER RDR
Sbjct: 1224 GEKDRSKHREKEKDRDREK-----------KERSHRDNKESAERTDSGKKERHRDRD--- 1269
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR----DYEVGDPDRDRGYS 385
++ R R+++ G RD ++ KD D+++ R+ R R++DR + E D DR+R
Sbjct: 1270 EKKREREKESG---SRDGDKSSTKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKH 1326
Query: 386 RDRDSDYDRIDSKHERDRHGERDY 409
RD+D DR +R++ GER +
Sbjct: 1327 RDKDGSADR----RKREKSGERKH 1346
>gi|170583877|ref|XP_001896769.1| hypothetical protein Bm1_26580 [Brugia malayi]
gi|158595927|gb|EDP34383.1| hypothetical protein Bm1_26580 [Brugia malayi]
Length = 175
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 195 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 235
AYK+ADG K+DGRRV+VD ERGRT +W PRRLGGG G TR
Sbjct: 31 AYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR 71
>gi|194909374|ref|XP_001981933.1| GG12319 [Drosophila erecta]
gi|190656571|gb|EDV53803.1| GG12319 [Drosophila erecta]
Length = 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F S+G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGMLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE--VNQRYSGREQEPS 253
Y + D +D RR+ VD + + WR G G G G+ N R + ++ +
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGDYGKLDFDNLRDNKDHRKSN 353
Query: 254 RGPSRSAEPRIREDRHGD--RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHR 311
G SR+ + RE + D R+R S ER + RE+ R +++ RDDR +
Sbjct: 354 DGRSRTEDH--REPKRADDPRNRMSSAERKKAREQ-----------RHQEQSERDDRKNV 400
Query: 312 DRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
R RTR RE++ E++R R+R+ G R K+ D+ER R+ R RD
Sbjct: 401 -RRRTRSREKQ-----EQNRSRSRNWPNGSAR---------KNSDRERIRNERSSRSRD 444
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P VS L+V L + TES IK+ FE +G ++ V L D T + +GYAF++Y
Sbjct: 329 PGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRA 388
Query: 190 RDMKAAYKQADGRKLDGRRVLVDV--ERGRT 218
D + A +Q +G +L GR + V+ E+G T
Sbjct: 389 EDARMALQQMEGFELAGRTLRVNTVHEKGTT 419
>gi|395536556|ref|XP_003770280.1| PREDICTED: TRAF3-interacting protein 1 [Sarcophilus harrisii]
Length = 691
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 104/161 (64%), Gaps = 25/161 (15%)
Query: 254 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 313
R PSR R+ R +D E S++R +DR++EREKS E +DR R +D DR
Sbjct: 153 RSPSRE-----RKQREEGKDEE-SKQREKDRDKEREKSKE--NDRERHKDP-------DR 197
Query: 314 DRTRDRERERDRGR---ERDRDRTRDRDRGRDRGRDHERDREKDR--DKERDRDRTRERE 368
D+ +D ER+R++ R ER+R+++RD+DRG + R+ ERD+EKD+ D ++++R +ER+
Sbjct: 198 DKVKDGERDRNKNRAKQEREREKSRDKDRG-PKDRELERDKEKDKKNDSGKEKERLKERD 256
Query: 369 RDRDYEVG-DPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 408
R+R+ E G D DRD+ R +D ++ + +HE+D+ E++
Sbjct: 257 REREKEKGKDKDRDKRRERVKDGEHSK---EHEKDKIKEQE 294
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 284 REREREKSLELSHDRP-RDRDHRDD-RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 341
+E+E +++ E+ P R+R R++ + + R +DR++ER++ +E DR+R +D DR
Sbjct: 140 KEKEEKRNSEIKDRSPSRERKQREEGKDEESKQREKDRDKEREKSKENDRERHKDPDR-- 197
Query: 342 DRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHER 401
D+ +D ERDR K+R K+ RERE+ RD + G +DR RD++ D + DS E+
Sbjct: 198 DKVKDGERDRNKNRAKQE-----REREKSRDKDRG--PKDRELERDKEKDK-KNDSGKEK 249
Query: 402 DRHGERD 408
+R ERD
Sbjct: 250 ERLKERD 256
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P VS L+V L + TES IK+ FE +G ++ V L D T + +GYAF++Y
Sbjct: 329 PGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRA 388
Query: 190 RDMKAAYKQADGRKLDGRRVLVDV--ERGRT 218
D + A +Q +G +L GR + V+ E+G T
Sbjct: 389 EDARMALQQMEGFELAGRTLRVNTVHEKGTT 419
>gi|355721028|gb|AES07129.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 70
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SG
Sbjct: 2 HERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSG 61
Query: 248 RE 249
R+
Sbjct: 62 RD 63
>gi|339006472|ref|ZP_08639047.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
gi|338775681|gb|EGP35209.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
Length = 1272
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDR-HHRDRDRT 316
R EP D+ ++DR++ E+ RD+E E+++ E D RDR+ DR ++DR
Sbjct: 895 RDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKD--RDREPEKDRDKEPEKDRD 952
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG 376
++ E+++D+ E+DRD+ ++DR ++ G+D +++ KDRDKE +DR +E E+DRD E G
Sbjct: 953 KEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDRDKEPEKDRDKEPG 1012
Query: 377 DPDRDRGYSRDRDSDYDR 394
DRD+ RD++ + D+
Sbjct: 1013 K-DRDKEPERDKEKEPDK 1029
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 77/111 (69%), Gaps = 6/111 (5%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
DRD+E ++R R+ E++R+K E D+ ++D +D +DRD+ +++R+++ G++RD
Sbjct: 926 DRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKD-KDKEPEKDRDKEPEKDRDKEPGKDRD 984
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 381
++ +DRD ++ G+D +++ EKDRDKE +DR +E ERD++ E PD++
Sbjct: 985 KEPGKDRD--KEPGKDRDKEPEKDRDKEPGKDRDKEPERDKEKE---PDKE 1030
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 278 RERGRDREREREKSLELSHDRPRDRDHRDDR-HHRDRDRTRDRERERDRGRERDRDRTRD 336
+E +DR++E EK RD++ DR ++DR ++ E++RD+ E+DRDR +
Sbjct: 889 KEPEKDRDKEPEKD--------RDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDREPE 940
Query: 337 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG-DPDRDRGYSRDRDSDYDRI 395
+DR ++ +D +++ EKD+DKE ++DR +E E+DRD E G D D++ G RD++ DR
Sbjct: 941 KDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDR- 999
Query: 396 DSKHERDR 403
D + E+DR
Sbjct: 1000 DKEPEKDR 1007
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 13/128 (10%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRT----RDRERER 323
+ G ++ + + + D+E+E + D D + +D +DRD+ RD+E E+
Sbjct: 856 QEGVKELKIAVKTVTDKEKESKP------DLGTDGEAKDKEPEKDRDKEPEKDRDKEPEK 909
Query: 324 DRGRE--RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 381
DR +E +DRD+ ++DR ++ +D +R+ EKDRDKE ++DR +E E+D+D E + DRD
Sbjct: 910 DRDKEPEKDRDKEPEKDRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKDKDKE-PEKDRD 968
Query: 382 RGYSRDRD 389
+ +DRD
Sbjct: 969 KEPEKDRD 976
>gi|212546055|ref|XP_002153181.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064701|gb|EEA18796.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 32/177 (18%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + ++K P LFV +L+ T + + F
Sbjct: 137 EREARAQALTLEMVGDLPFADVKP------------PENVLFVCKLNPVTQDEDLHLIFS 184
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER--GR 217
+GPI ++ DK+T YAFIE+ + +D + AY + +G +D R+ VD + +
Sbjct: 185 RFGPILSCEVIRDKKTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSVSK 244
Query: 218 TVPNWR----PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG 270
WR +R GGG G + E ++Y R+AE R R DR+G
Sbjct: 245 LSDTWRQATVQKRQGGGFGG--ISSLERKRQY------------RTAEARGRTDRYG 287
>gi|170038581|ref|XP_001847127.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
gi|167882326|gb|EDS45709.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
Length = 210
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 129 DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMH 188
P GDP T+FV RL + E +++ F G + R R+V D T RGYAF+E+
Sbjct: 56 SPKAEGDPRHTVFVGRLEHCVDEERVRELFGRCGTVVRCRVVRDVVTGVSRGYAFVEFSR 115
Query: 189 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 227
+ ++ A K+ G+ ++G+ +LVD E GRT+ W+PRRL
Sbjct: 116 RKYVERALKELHGKTVEGKEILVDEEVGRTLKGWKPRRL 154
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 126 PHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIE 185
P+ P S P + L+V L + TE ++ FE +G I ++L+TD +T K +GY F+
Sbjct: 269 PNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPDTGKSKGYGFLT 327
Query: 186 YMHTRDMKAAYKQADGRKLDGR 207
+ H D K A +Q +G +L GR
Sbjct: 328 FHHATDAKKAMEQLNGFELAGR 349
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
+T+F +LS ++ F S G ++ VRL+T +T + +G A+IE+ + A
Sbjct: 181 LRTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDAESVPLAL 240
Query: 197 KQADGRKLDGRRVLVDVER------GRTVPNWRPRRLGG 229
G+KL G ++V + G T+PN P+ G
Sbjct: 241 GLT-GQKLLGVPIIVQHTQAEKNRVGNTLPNLAPKTSNG 278
>gi|21355677|ref|NP_651291.1| CG5808 [Drosophila melanogaster]
gi|4972682|gb|AAD34736.1| unknown [Drosophila melanogaster]
gi|7301211|gb|AAF56342.1| CG5808 [Drosophila melanogaster]
gi|220943598|gb|ACL84342.1| CG5808-PA [synthetic construct]
gi|220953568|gb|ACL89327.1| CG5808-PA [synthetic construct]
Length = 653
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F S+G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWR 223
Y + D +D RR+ VD + + WR
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR 325
>gi|118088352|ref|XP_419663.2| PREDICTED: peptidylprolyl isomerase (cyclophilin)-like 4 [Gallus
gallus]
Length = 478
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +++ EK A+ A L+ D V P LFV +L+ TT+ ++ F +GPI
Sbjct: 208 IEEVQAEKEAKTRAILLEMVGDLPDAEVKP-PENVLFVCKLNPVTTDEDLEIIFSRFGPI 266
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 223
K ++ D +T + YAFIE+ D + AY + D +D RR+ VD + W+
Sbjct: 267 KSCEVIRDWKTGESLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKWK 325
>gi|145501258|ref|XP_001436611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403752|emb|CAK69214.1| unnamed protein product [Paramecium tetraurelia]
Length = 3975
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 99/161 (61%), Gaps = 13/161 (8%)
Query: 265 REDRHGD--RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDR-------HHRDRDR 315
++DR D +D+++ +ER +D+E+ ++K + + D+ +D+ + DR + +DR
Sbjct: 584 QQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDR 643
Query: 316 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 375
T+D+E+ + + ++R D +D+ + +DR +D E+D++K +D+ D+++ +++++DR
Sbjct: 644 TQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDR---T 700
Query: 376 GDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQED 416
D ++D+ +DR D ++ + + ++DR + + D Q+D
Sbjct: 701 SDNEQDKQKQQDRTQDKEQ-NKQKQQDRTSDNEQDKQQQQD 740
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 87/136 (63%), Gaps = 12/136 (8%)
Query: 265 REDRHGDR--DRERSRERGRDREREREKSLELSHDRPRDRDHRDDR-------HHRDRDR 315
++DR D+ D+++ ++R D E++++K + + D+ +++ + DR + +DR
Sbjct: 612 QQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDR 671
Query: 316 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 375
T+D+E+++ + ++R D+ +D+ + +DR D+E+D++K +D+ +D+++ +++++DR
Sbjct: 672 TQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDR---T 728
Query: 376 GDPDRDRGYSRDRDSD 391
D ++D+ +DR D
Sbjct: 729 SDNEQDKQQQQDRTQD 744
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
Query: 248 REQEPSRGPSRSAEPRIREDRHGDR--DRERSRERGRDREREREKSLELSHDRPRDRDHR 305
++Q+ R + + + ++DR D+ D+++ ++R D E++++K + + D+ +++ +
Sbjct: 665 KQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQ 724
Query: 306 DDR---HHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
DR + +D+ + +DR +++++ +++ +DRT D ++ R + +D +D+E+D+ K++ R
Sbjct: 725 QDRTSDNEQDKQQQQDRTQDKEQNKQKQQDRTSDNEQDRQKSQDRTQDKEQDKQKQQGRT 784
Query: 363 R 363
+
Sbjct: 785 Q 785
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 96/150 (64%), Gaps = 5/150 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH---RDRDRTRDRERERDRGR 327
++DR++S++R +D++++++ + + D+ +D+ + DR +D+ + +DR + ++ +
Sbjct: 536 EQDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDK 595
Query: 328 ERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE-VGDPDRDRGYSR 386
++ ++RT+D+++ + + +D D+E+D+ K++DR E+++ + + D ++++ +
Sbjct: 596 QKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQ 655
Query: 387 DRDSDYDRIDSKHERDRHGERDYDPTDQED 416
DR SD ++ D + ++DR +++ D Q+D
Sbjct: 656 DRTSDNEQ-DKQQQQDRTQDKEQDKQKQQD 684
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 103/205 (50%), Gaps = 56/205 (27%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
++D+++ ++R D+E++++K + + D +D+ + ++RT+D+E+ + + ++R
Sbjct: 564 EQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDK-------QKQQERTQDKEQNKQKQQDRT 616
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 390
D+ +D+ + +DR D+E+D++K +D+ +D+++ +++++DR D ++D+ +DR
Sbjct: 617 SDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDR---TSDNEQDKQQQQDRTQ 673
Query: 391 DYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRY 450
D ++ D + ++DR +++ D Q+D
Sbjct: 674 DKEQ-DKQKQQDRTSDKEQDKQKQQD---------------------------------- 698
Query: 451 DQMEEDDYRYDRATSESRDKERTRD 475
R + +DK++ +D
Sbjct: 699 -----------RTSDNEQDKQKQQD 712
>gi|212546053|ref|XP_002153180.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064700|gb|EEA18795.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 454
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 32/177 (18%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + ++K P LFV +L+ T + + F
Sbjct: 222 EREARAQALTLEMVGDLPFADVKP------------PENVLFVCKLNPVTQDEDLHLIFS 269
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER--GR 217
+GPI ++ DK+T YAFIE+ + +D + AY + +G +D R+ VD + +
Sbjct: 270 RFGPILSCEVIRDKKTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSVSK 329
Query: 218 TVPNWR----PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG 270
WR +R GGG G + E ++Y R+AE R R DR+G
Sbjct: 330 LSDTWRQATVQKRQGGGFGG--ISSLERKRQY------------RTAEARGRTDRYG 372
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
NDPN Y L+V L++ T+ I++ F+ +G I+ V L D+ T K +GYAF+++
Sbjct: 444 NDPNS----YARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 499
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDV 213
+ D K A ++ +G +L GR + V++
Sbjct: 500 NMHDAKNAMEKMNGFQLAGRALRVEI 525
>gi|149055936|gb|EDM07367.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_e [Rattus norvegicus]
Length = 352
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L VA L+ + ++ FE G + T P G + + AAYK A
Sbjct: 14 LLVAWLTGGSVSVCVQMWFEGQG----CCCMEPCLTRGPSG----DSPSPTSVAAAYKHA 65
Query: 200 DGRKLDGRRVLVDVERGRTVPNW 222
DG+K+DGRRVLVDVERGRTV W
Sbjct: 66 DGKKIDGRRVLVDVERGRTVKGW 88
>gi|326915720|ref|XP_003204161.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Meleagris gallopavo]
Length = 481
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +++ EK A+ A L+ D V P LFV +L+ TT+ ++ F +GPI
Sbjct: 211 IEEVQAEKEAKTRAILLEMVGDLPDAEVK-PPENVLFVCKLNPVTTDEDLEIIFSRFGPI 269
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 223
K ++ D +T + YAFIE+ D + AY + D +D RR+ VD + W+
Sbjct: 270 KSCEVIRDWKTGESLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKWK 328
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
NDPN Y L+V L++ T+ I++ F+ +G I+ V L D+ T K +GYAF+++
Sbjct: 444 NDPN----SYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 499
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDV 213
+ D K A ++ +G +L GR + V++
Sbjct: 500 NMHDAKNAMEKMNGFQLAGRALRVEI 525
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 35/193 (18%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+K P LFV +L+ T + + F
Sbjct: 222 EREARAQALTLEMVGDLPFAEVKP------------PENVLFVCKLNPVTQDEDLHLIFS 269
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER--GR 217
+GPI ++ DK T YAFIE+ + +D + AY + +G +D R+ VD + +
Sbjct: 270 RFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKMEGVLIDDHRIHVDFSQSVSK 329
Query: 218 TVPNWR----PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG--- 270
WR +R GGG G + E ++Y R+AE R R DR+G
Sbjct: 330 LSDTWRQATVQKRQGGGFGG--ISSLERKRQY------------RTAEDRGRPDRYGMVF 375
Query: 271 DRDRERSRERGRD 283
D+D R RD
Sbjct: 376 DKDEMRRPPPSRD 388
>gi|195158659|ref|XP_002020203.1| GL13859 [Drosophila persimilis]
gi|194116972|gb|EDW39015.1| GL13859 [Drosophila persimilis]
Length = 615
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
Y + D +D RR+ VD + + WR G G G V G+
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVEGVDGK 337
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+F+ YE TE I F YG I + LV DK+T K +G+ F+ Y R A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 200 DGRKLDGRRVLVDVERGRTVPNWR 223
+G K+ GR + VD V N+R
Sbjct: 98 NGIKIKGRTIRVD-----HVANYR 116
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 323
DR RD ER RER R+R+ EK E D R RD R+ R RD RDRERER
Sbjct: 270 DRGRQRDGERQRERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDGERDRERER 329
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
D GR+RD DR R+++R R RD ERD+E++RD R RD R+RER+RD
Sbjct: 330 DGGRQRDGDRDREQERDGGRQRDVERDQERERDGGRQRDGERDRERERD 378
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 15/83 (18%)
Query: 268 RHGDRDRERSRERGR------DRERERE--KSLELSHDRPRDRDHRDDRHHRDRDRTRDR 319
R G+RDRER R+ GR DRE+ER+ + ++ D+ R+RD R RD RDR
Sbjct: 319 RDGERDRERERDGGRQRDGDRDREQERDGGRQRDVERDQERERD-----GGRQRDGERDR 373
Query: 320 ERERDRGRERD--RDRTRDRDRG 340
ERERD GR+RD RDR R+RD G
Sbjct: 374 ERERDGGRQRDGVRDRKRERDGG 396
>gi|395535114|ref|XP_003769577.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4 [Sarcophilus
harrisii]
Length = 486
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +GPIK ++ D +T + YAFIE+ D + A
Sbjct: 238 PENVLFVCKLNPVTTDEDLEIIFSRFGPIKSCEVIRDWKTGESLCYAFIEFEKEEDCEKA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWR 223
+ + D +D RR+ VD + WR
Sbjct: 298 FFKMDNVLIDDRRIHVDFSQSVAKVKWR 325
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 270 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 329
+RDR R ER R RE ER++ E DRPR+ + RDR R+ ER+R R ER
Sbjct: 671 AERDRPREAERDRPREAERDRPREAERDRPREAE---------RDRPREAERDRQREAER 721
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DR R +RDR R+ RD +R+ E+DR +E +RDR RE ERDR E + DR R RDR
Sbjct: 722 DRQREAERDRPREAERDRQREAERDRQREAERDRQREAERDRQREA-ERDRQREAERDRQ 780
Query: 390 SDYDR 394
+ +R
Sbjct: 781 REAER 785
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 96/200 (48%), Gaps = 39/200 (19%)
Query: 241 VNQRYSGREQEPSRGPSR--SAEPRIREDRHGDRDRERSR----------ERGRDRERER 288
NQR++ + E ++ +R S I+ H DRER +R R E ER
Sbjct: 586 ANQRWTKQCDERNKKDNRHPSGRKNIQNGEHLRADRERDNRNKEEGEKLEKRNRPGEAER 645
Query: 289 EKSLELSH--------------------DRPRDRDHRDDRHHRDRDRTRDRERERDRGRE 328
E E + DRPR+ + RD +RDR R+ ER+R R E
Sbjct: 646 EGDFERAKRRNMERDRSRERDRPREAERDRPREAE-RDRPREAERDRPREAERDRPREAE 704
Query: 329 RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDR 388
RDR R +RDR R+ RD +R+ E+DR +E +RDR RE ERDR E + DR R RDR
Sbjct: 705 RDRPREAERDRQREAERDRQREAERDRPREAERDRQREAERDRQREA-ERDRQREAERDR 763
Query: 389 DSDYDRIDSKHERDRHGERD 408
+ +R +R R ERD
Sbjct: 764 QREAER-----DRQREAERD 778
>gi|198465678|ref|XP_002135021.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
gi|198150268|gb|EDY73648.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
Length = 1099
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 250 QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD------ 303
+EP R RS E ++R ++R+RS+ER R +ER+R K + S +RP+ ++
Sbjct: 424 KEPERKRERSKERFRSKERQRSKERQRSKERLRSKERQRSKERQRSKERPKSKERQRSRE 483
Query: 304 ---------HRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKD 354
++ + ++R R+++R++ +DR R +DR R++DR R ++R R ER R K
Sbjct: 484 RQRSKERIRSKERQRSKERQRSKERQKSKDRQRSKDRQRSKDRQRSKERQRSKERQRSKA 543
Query: 355 RDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 394
R ++R R++ER R +D V + RDR R R + R
Sbjct: 544 RLYSKERLRSKERARSKDKPVVEIKRDRSKDRQRSKERKR 583
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 11/118 (9%)
Query: 266 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDR----------HHRDRDR 315
+DR +DR+RS+ER R +ER+R K+ S +R R ++ + +DR R
Sbjct: 518 KDRQRSKDRQRSKERQRSKERQRSKARLYSKERLRSKERARSKDKPVVEIKRDRSKDRQR 577
Query: 316 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD-RDRTRERERDRD 372
+++R+R D+ ++RD ++ R R ++R R ER R KDR ++ + + R++ER+R +D
Sbjct: 578 SKERKRSVDKAPSKERDMSKGRQRSKERQRSKERRRSKDRGQQSNEKKRSKERQRSKD 635
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 277 SRERGRDREREREK---SLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER--DR 331
S+ER R +ER R K +E+ DR +DR R R D+ +ER+ +GR+R +R
Sbjct: 547 SKERLRSKERARSKDKPVVEIKRDRSKDR-QRSKERKRSVDKAPSKERDMSKGRQRSKER 605
Query: 332 DRTRDRDRGRDRG-RDHERDREKDRDKERDRDRTRERE 368
R+++R R +DRG + +E+ R K+R + +DR R++ER+
Sbjct: 606 QRSKERRRSKDRGQQSNEKKRSKERQRSKDRQRSKERQ 643
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + +ES IK+ FE +G ++ V L D T + +GYAF++Y D K A +Q
Sbjct: 400 LYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQM 459
Query: 200 DGRKLDGRRVLVDV 213
DG +L GR + V+
Sbjct: 460 DGFELAGRTLRVNT 473
>gi|198449749|ref|XP_002136956.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
gi|198130740|gb|EDY67514.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
Y + D +D RR+ VD + + WR G G G V G+
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVEGVDGK 337
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
L+ P P P + L+V L + TE ++ FE +G I ++L+ D ET + +G
Sbjct: 342 LQSAPPPFQPKAHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKG 400
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGR 207
Y FI Y + D K A +Q +G +L GR
Sbjct: 401 YGFITYHNADDAKKALEQLNGFELAGR 427
>gi|194745953|ref|XP_001955449.1| GF18772 [Drosophila ananassae]
gi|190628486|gb|EDV44010.1| GF18772 [Drosophila ananassae]
Length = 621
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
Y + D +D RR+ VD + + WR G G G G+
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGADGK 337
>gi|345305814|ref|XP_001506397.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Ornithorhynchus anatinus]
Length = 479
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
+ ++ EK A+ A L+ D ++ P LFV +L+ TT+ ++ F +G I
Sbjct: 200 VEEIMAEKEAKTQAILLEMVGDLPDADIK-PPENVLFVCKLNPVTTDEDLEIIFSRFGSI 258
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 223
K ++ D +T + YAFIE+ D + AY + D +D RR+ VD + WR
Sbjct: 259 KSCEVIRDWKTGESLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVAKIKWR 317
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDR 325
+R ++R RS+ER R +ER R K S ++PR +D HR R +R R +ER+R +
Sbjct: 475 ERQRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSK 534
Query: 326 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER--ERDRDYEVGDPDRDRG 383
R R ++R R ++R R + R ++R+K+R ER R + +ER ER R E ++R
Sbjct: 535 ERLRSKERVRSKERQRSKERVRSKERQKERSAERQRSKVKERSKERQRSKERVQRSKERQ 594
Query: 384 YSRDRDSDYDRIDSKH-----ERDRHGE 406
S++R DR SK ER R GE
Sbjct: 595 RSKERLRSKDRQRSKERQKSKERPRQGE 622
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 27/224 (12%)
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRT 316
RS E + + R G ++R+RS+ER +R+R +E+ L +R + +D R + ++R
Sbjct: 408 RSKERQRSKQRAGSKERKRSKERRSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQ 467
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG 376
R +ER ++R R ++R R+++R R ++R R ER R K++ + +DR R++ER+R V
Sbjct: 468 RSKERPKERQRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRS----VE 523
Query: 377 DP-DRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGD 435
P ++R S++R +R+ SK ER R ER Q++ + E R
Sbjct: 524 RPRSKERQRSKERLRSKERVRSK-ERQRSKERVRSKERQKE--------RSAERQRSKV- 573
Query: 436 HDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDRE 479
+R + + R R+ R KER R DR+
Sbjct: 574 -----------KERSKERQRSKERVQRSKERQRSKERLRSKDRQ 606
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
++R+RS+ER R +ER++E+S E + ++R R R+++R+R ++R R +D
Sbjct: 545 SKERQRSKERVRSKERQKERSAERQRSKVKERSKERQRSKERVQRSKERQRSKERLRSKD 604
Query: 331 RDRTRDRDRGRDRGRDHERDREK 353
R R+++R + ++R R E +E+
Sbjct: 605 RQRSKERQKSKERPRQGEVAKER 627
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEY 186
H P V+ L+V L + TES IK+ FE +G ++ V L D T + +GYAF++Y
Sbjct: 345 HLPPGVTASG-AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQY 403
Query: 187 MHTRDMKAAYKQADGRKLDGRRVLVD 212
D + A +Q +G +L GR + V+
Sbjct: 404 KRAEDARMALEQMEGFELAGRTLRVN 429
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
NDPN Y L+V L++ T+ +++ F+ +G I+ V L D+ T K +GYAF+++
Sbjct: 427 NDPN----SYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFK 482
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDV 213
+ D K A ++ +G +L GR + V++
Sbjct: 483 NMHDAKNAMEKMNGFQLAGRALRVEI 508
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 137 YKTLFVARLSYETTESKIKREFES-YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
+++FV++LS + ++ + FE G ++ R++TD+ + + +G ++E+ ++ A
Sbjct: 305 MRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSVQKA 364
Query: 196 YKQADGRKLDGRRVLV---DVERGR-TVPNWRPRRLGGGLGTT 234
G KL G V+V + E+ R + N +P + GL T
Sbjct: 365 LALT-GTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTV 406
>gi|449443125|ref|XP_004139331.1| PREDICTED: uncharacterized protein LOC101205569 [Cucumis sativus]
Length = 346
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+++V L Y+ TE ++R F+ YG + V+++ D+ T + + Y F+ + + R A K
Sbjct: 8 SIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRST-RGKCYGFVTFTNPRSAIDAIKD 66
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 258
DGR ++GR V V N RLGG G +E N+ + R+ R R
Sbjct: 67 MDGRTIEGRVVRV---------NGVKSRLGGRFG------KEGNRFDAERDVSWERDRDR 111
Query: 259 SAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRD--RDHRDDRHHRDRDRT 316
+ RH R+ + SR+ R RE + +K H + RD RD DR +
Sbjct: 112 GRDYDHDRYRHRGRNNDWSRDHDRSREHDLDKERGYKHSQDRDLPRDQFLDREPELEKTS 171
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERE 368
+D E+ D D+D +D GR ++ + D+ + DRD+ R+
Sbjct: 172 KDNEKVHDLKLNHDQDWEKDHGADLSGGRGIDKTDDYDKSLDNDRDQVLRRD 223
>gi|260805176|ref|XP_002597463.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
gi|229282728|gb|EEN53475.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
Length = 366
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 193 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEP 252
AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG EVN ++SGRE +P
Sbjct: 42 SAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRKGGPEVNVKHSGRE-DP 100
Query: 253 SRG 255
+RG
Sbjct: 101 TRG 103
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 41/183 (22%)
Query: 268 RHGDRDRERSR-----ERGRDRER--------EREKSLELSH-DRPRDRDHR-DDRHHRD 312
+H +DR++SR RG+DRER EREK + S DR R+ R +DR R+
Sbjct: 45 KHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDERE 104
Query: 313 RDRTRDRERERDRGRERDRDRTRDRDRGR-------------------DRGRDHERDREK 353
+DR RD+ RE+D RE+ RD+ R+RD+ R DRGRD ER +EK
Sbjct: 105 KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEK 164
Query: 354 DRDK----ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK--HERDRHGER 407
+RD+ E++RDRT++R+R+++ E DR++ D+D D D ID + ER R ER
Sbjct: 165 NRDRDKEREKERDRTKDRDREKEKEKS-KDREKERENDKDRDRDAIDKEKGKERIRDKER 223
Query: 408 DYD 410
+ D
Sbjct: 224 EAD 226
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 97/150 (64%), Gaps = 19/150 (12%)
Query: 265 REDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD------DRHHRDRDRTRD 318
R++R DR+R++ RE+ DRE+ R+K +R RD+D +D R+ D+ D
Sbjct: 100 RDEREKDRNRDKVREKDYDREKYRDK------ERERDKDRKDRGKEKEREREREVDKESD 153
Query: 319 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDP 378
R R+++RG+E++RDR ++R++ RDR +D RDREK+++K +DR++ RE ++DRD + D
Sbjct: 154 RGRDKERGKEKNRDRDKEREKERDRTKD--RDREKEKEKSKDREKERENDKDRDRDAIDK 211
Query: 379 DRDRGYSRDRDSDYDRIDSKHERDRHGERD 408
++ + RD++ + D +RDR+ +RD
Sbjct: 212 EKGKERIRDKEREAD-----QDRDRYKDRD 236
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
DR DRDRE+ +E+ +DRE+ERE +D+ RDRD D + ++R RD+ERE D+
Sbjct: 177 DRTKDRDREKEKEKSKDREKERE------NDKDRDRDAID--KEKGKERIRDKEREADQ- 227
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRD 356
DRDR +DRD+G + RD + +DRD
Sbjct: 228 ---DRDRYKDRDKGSRKNRDEDGGDNRDRD 254
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 89/138 (64%), Gaps = 11/138 (7%)
Query: 274 RERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDR 333
R++ RER +DR +++ E +R R+ D DR RD++R +++ R+RD+ RE++RDR
Sbjct: 123 RDKERERDKDR---KDRGKEKEREREREVDKESDR-GRDKERGKEKNRDRDKEREKERDR 178
Query: 334 TRDRDRGRDRGRDHERDREKDRDKERDRD-----RTRERERDRDYEVGDPDRDRGYSRDR 388
T+DRDR +++ + +R++E++ DK+RDRD + +ER RD++ E D DRDR RD+
Sbjct: 179 TKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKEREA-DQDRDRYKDRDK 237
Query: 389 DSDYDR-IDSKHERDRHG 405
S +R D RDR G
Sbjct: 238 GSRKNRDEDGGDNRDRDG 255
>gi|427794309|gb|JAA62606.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 412
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +GP+K ++ D++T YAF+E+ + A
Sbjct: 156 PENVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDRKTGDSLQYAFVEFEQREHCENA 215
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS-- 253
+ + D +D RR+ VD + W+ G G G + ++ ++ G E
Sbjct: 216 FFKMDNVLIDDRRIHVDFSQSVAKLRWK----GKGRGVEYINDDKGGKKPRGARYELKDT 271
Query: 254 --RGPSRSAEPRIREDR--HGDRD---RERSRERGRDREREREKSLELSHDRPRDRDHRD 306
RG + + D G +D +ER+ +DR++E K DR +D DH+D
Sbjct: 272 ARRGGAGGQYDLVWSDNEEEGGKDTNQKERNERSQKDRKKESHK------DRYKD-DHKD 324
Query: 307 DRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 341
R +D DR + RGR D R+ RD+ R
Sbjct: 325 SRSGGHKD---DRHADSRRGRHEDSRRSSHRDQER 356
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 20/118 (16%)
Query: 279 ERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRD 338
E RDR RE DR R+R+ DR R+RE +RDR RE DRDR R+ D
Sbjct: 515 EFDRDRNRE--------FDRDRNREF---------DRDRNREFDRDRNREMDRDRNREMD 557
Query: 339 RGRDRGRDHERDREKDRDKER--DRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 394
R R+R D +R+RE DRD+ R DRDR RE +RDR+ E D DR+R + RDR+ ++DR
Sbjct: 558 RDRNREMDRDRNREMDRDRNREMDRDRNREVDRDRNREF-DRDRNREFDRDRNREFDR 614
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 19/111 (17%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
DR+ + DR+R+RE RDR RE + RDR +R+ DR R+RE +RDR
Sbjct: 527 DRNREFDRDRNREFDRDRNREMD----------RDR-------NREMDRDRNREMDRDRN 569
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKER--DRDRTRERERDRDYEV 375
RE DRDR R+ DR R+R D +R+RE DRD+ R DRDR RE +RDR+ E+
Sbjct: 570 REMDRDRNREMDRDRNREVDRDRNREFDRDRNREFDRDRNREFDRDRNREM 620
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 31/190 (16%)
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRH--GDRDRERSRERGRDREREREKSLELSHDR 298
N + + S+G S P R H + ++ RERG+D++ +++ ++
Sbjct: 419 TNSHNTDHNHDKSKGMSNHHTPAKRHSLHIPSSHNHDKKRERGKDKDEKQDSHIDG---- 474
Query: 299 PRDRDHRDDRHHRDRDRTRDRERERDRGRE------------------RDRDRTRDRDRG 340
H++ RD+ R R+RE +RDR RE RDR+R DRDR
Sbjct: 475 -----HKETDSERDKKRARNREMDRDRNREMDRDRNRDFDRDRNREFDRDRNREFDRDRN 529
Query: 341 RDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE 400
R+ RD R+ ++DR++E DRDR RE +RDR+ E+ D DR+R RDR+ + DR D E
Sbjct: 530 REFDRDRNREFDRDRNREMDRDRNREMDRDRNREM-DRDRNREMDRDRNREMDR-DRNRE 587
Query: 401 RDRHGERDYD 410
DR R++D
Sbjct: 588 VDRDRNREFD 597
>gi|396481240|ref|XP_003841191.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
gi|312217765|emb|CBX97712.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
Length = 478
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 228 EREARAQALTLEMVGDLPFAEV------------APPENVLFVCKLNPVTQDEDLELIFS 275
Query: 160 SYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER--GR 217
+G I ++ DK T YAFIEY + +D + AY + DG +D R+ VD + +
Sbjct: 276 RFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFSQSVSK 335
Query: 218 TVPNWRP------RRLGGGLG 232
+WR +R GG G
Sbjct: 336 IADDWRDDANKKRKRAAGGFG 356
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
DR +++R RDRE ER+ E DR R RD R RD +DRERERD GR+RD
Sbjct: 244 DRRHAETQQRERDREGERDGDKERERDRGRQRDG-----GRQRDGEKDRERERDGGRQRD 298
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
+R R+RD GR RD ERDRE++RD R RD R+RE++RD
Sbjct: 299 GERQRERDGGRQ--RDGERDRERERDGGRQRDGDRDREQERD 338
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 306 DDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 365
D RH + R RDRE ERD +ER+RDR R RD GR RD E+DRE++RD R RD R
Sbjct: 244 DRRHAETQQRERDREGERDGDKERERDRGRQRDGGRQ--RDGEKDRERERDGGRQRDGER 301
Query: 366 ERERD----RDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 410
+RERD RD E D +R+R R RD D DR + ERD +RD +
Sbjct: 302 QRERDGGRQRDGER-DRERERDGGRQRDGDRDR---EQERDGGRQRDVE 346
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 8/106 (7%)
Query: 258 RSAEPRIRE-DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRT 316
R AE + RE DR G+RD ++ RER R R+R+ + + DR R+RD R R
Sbjct: 246 RHAETQQRERDREGERDGDKERERDRGRQRDGGRQRDGEKDRERERDG-------GRQRD 298
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
+R+RERD GR+RD +R R+R+R R RD +RDRE++RD R RD
Sbjct: 299 GERQRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQRD 344
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ DK+T+ YAFIE+ + + + A
Sbjct: 238 PENVLFVCKLNPVTTDEDLEIIFSRFGKIVSCEVIRDKKTSNSLQYAFIEFDNKKSCEDA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGT 233
Y + D +D RR+ VD + + W LG G G
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKMRW----LGKGRGV 331
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TES IK+ FE +G ++ V L D T + +GYAF++Y + D + A +Q
Sbjct: 399 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQM 458
Query: 200 DGRKLDGRRVLVD 212
+G +L GR + V+
Sbjct: 459 EGFELAGRTLRVN 471
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 41/183 (22%)
Query: 268 RHGDRDRERSR-----ERGRDRER--------EREKSLELSH-DRPRDRDHR-DDRHHRD 312
+H +DR++SR RG+DRER EREK + S DR R+ R +DR R+
Sbjct: 45 KHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDERE 104
Query: 313 RDRTRDRERERDRGRERDRDRTRDRDRGR-------------------DRGRDHERDREK 353
+DR RD+ RE+D RE+ RD+ R+RD+ R DRGRD ER +EK
Sbjct: 105 KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEK 164
Query: 354 DRDK----ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK--HERDRHGER 407
+RD+ E++RDRT++R+R+++ E DR++ D+D D D ID + ER R ER
Sbjct: 165 NRDRDKEREKERDRTKDRDREKEKEKS-KDREKERENDKDRDRDAIDKEKGKERIRDKER 223
Query: 408 DYD 410
+ D
Sbjct: 224 EAD 226
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 48/208 (23%)
Query: 265 REDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD------DRHHRDRDRTRD 318
R++R DR+R++ RE+ DRE+ R+K +R RD+D +D R+ D+ D
Sbjct: 100 RDEREKDRNRDKVREKDYDREKYRDK------ERERDKDRKDRGKEKEREREREVDKESD 153
Query: 319 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGD- 377
R R+++RG+E++RDR ++R++ RDR +D RDREK+++K +DR++ RE ++DRD + D
Sbjct: 154 RGRDKERGKEKNRDRDKEREKERDRTKD--RDREKEKEKSKDREKERENDKDRDRDAIDK 211
Query: 378 ---------------------PDRDRGYSRDRDSDYDRI-----DSKHERDRHGERDYDP 411
DRD+G ++RD +DR D K + D RD D
Sbjct: 212 EKGKERIRDKEREADQDRDRYKDRDKGSRKNRDEGHDRSKDGGKDDKLKLDGGDNRDRDV 271
Query: 412 TDQ-------EDDRGWYDHHENYEHHRG 432
T Q EDD +H +N E G
Sbjct: 272 TKQGRGSHHDEDDSRAIEHEKNAEGASG 299
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV YE TE + F YG I + LV DK+T K +G+ FI Y R A
Sbjct: 38 IFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNF 97
Query: 200 DGRKLDGRRVLVD 212
+G K+ GR + VD
Sbjct: 98 NGIKIKGRTIRVD 110
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L + LS+ T+ KI++ F+S+G I+ V L D T +PRG+ F+EY K A
Sbjct: 7 SLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAKEAMSI 66
Query: 199 ADGRKLDGRRVLVDVERGR 217
+ K+DG+ + + + + R
Sbjct: 67 LNHSKIDGKEIKIIIAQNR 85
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TE IK+ FE +G + V L D T + +GYAF++Y D K A +Q
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQM 415
Query: 200 DGRKLDGRRVLVDV--ERGRTVPN 221
DG +L GR + V+ E+G V N
Sbjct: 416 DGFELAGRTLRVNSVNEKGVAVRN 439
>gi|413925203|gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
gi|413925204|gb|AFW65136.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
Length = 603
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLFV L + TT++ ++ E YGP+K VR +K + K +GY +++ A +
Sbjct: 180 TLFVGELHWWTTDADLESELSKYGPVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEG 239
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+G +GR +V +V RR+G
Sbjct: 240 MNGHTFNGRPCVVAFATPNSV-----RRMG 264
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+F+ YE +E I F YG I + LV DK+T K +G+ F+ Y R A
Sbjct: 38 VFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 200 DGRKLDGRRVLVD 212
+G K+ GR + VD
Sbjct: 98 NGIKIKGRTIRVD 110
>gi|390363527|ref|XP_796157.3| PREDICTED: uncharacterized protein LOC591504 [Strongylocentrotus
purpuratus]
Length = 831
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
DR DR ++ R R DRERERE LE D+ RD++H D+D RDRE +RDR
Sbjct: 520 DRERDRYCDKERNRDCDREREREGDLEQEQDQERDQEH-------DQDHERDREWDRDR- 571
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 386
+ R D++RGR+R + E DRE +RD++ R+R +D++ + DPDR++G +
Sbjct: 572 ---ETKRNGDKERGRERETEKEDDREMERDRDSKNHMERDRTQDKEEKDRDPDREKGKEQ 628
Query: 387 DRDSDYD 393
+R D +
Sbjct: 629 ERTRDSE 635
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 11/101 (10%)
Query: 311 RDRDRTRDRERERDRGRERDRD----RTRDRDRGRDRGRDHERDREKDRDKERDRDRTRE 366
R+RDR D+ER RD RER+R+ + +D++R ++ +DHERDRE DRD+E R+ +E
Sbjct: 521 RERDRYCDKERNRDCDREREREGDLEQEQDQERDQEHDQDHERDREWDRDRETKRNGDKE 580
Query: 367 RERDRDYEVGDPDRDRGYSRDRDS----DYDRIDSKHERDR 403
R R+R+ E D DR RDRDS + DR K E+DR
Sbjct: 581 RGRERETEKED---DREMERDRDSKNHMERDRTQDKEEKDR 618
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 18/97 (18%)
Query: 267 DRHGDRDRERSR----ERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERE 322
DR DRDRE R ERGR+RE E+E DR +RD RD ++H +RDRT+D+E
Sbjct: 564 DREWDRDRETKRNGDKERGRERETEKED------DREMERD-RDSKNHMERDRTQDKE-- 614
Query: 323 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER 359
E+DRD R++ + ++R RD E D ++E+
Sbjct: 615 -----EKDRDPDREKGKEQERTRDSEPSLNGDENEEK 646
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSH--DRPRDRDHRDDRHHRDRDRTRDRERERD 324
DR DRDR R RG+DR R RE + S +R +DRD R+ +R +DR R E +R+
Sbjct: 410 DRGQDRDRSREGYRGQDRARSREGERDRSREGNRGQDRD-RNREGYRGQDRDRSPEGDRE 468
Query: 325 RGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR-G 383
R RER+RDR+R+ +RG+DR R+ E R +DRD+ R+ DR R +E++R D DR+R G
Sbjct: 469 RSRERNRDRSREGNRGQDRDRNQEGYRGQDRDRSREGDRERSKEKNRG-RGQDRDRNREG 527
Query: 384 Y-SRDRDSDYDRIDSK-HERDR-HGERDY 409
Y +DRD D +R ++ ERDR H +RD+
Sbjct: 528 YRGQDRDRDRNRGQNRSQERDRSHQDRDH 556
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR 327
R G+RDR R RG+DR+R RE + RDR DR R R+R RDR RE +RG+
Sbjct: 431 REGERDRSREGNRGQDRDRNREGY----RGQDRDRSPEGDRE-RSRERNRDRSREGNRGQ 485
Query: 328 ERDRDRT------RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 381
+RDR++ RDR R DR ER +EK+R + +DRDR RE R +D D DR+
Sbjct: 486 DRDRNQEGYRGQDRDRSREGDR----ERSKEKNRGRGQDRDRNREGYRGQDR---DRDRN 538
Query: 382 RGYSRDRDSDYDRIDSKHER 401
RG +R ++ D D H+R
Sbjct: 539 RGQNRSQERDRSHQDRDHKR 558
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 22/156 (14%)
Query: 282 RDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRD--RERERDRGRERDRDRTRDRDR 339
+D+ER +EK S DR RDR DRDR+R+ R ++R R RE +RDR+R+ +R
Sbjct: 392 KDKERNKEKR-SRSKDRQRDRGQ-------DRDRSREGYRGQDRARSREGERDRSREGNR 443
Query: 340 GRDRGRDHERDREKDRDK--ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDS 397
G+DR R+ E R +DRD+ E DR+R+RER RDR E +RG RDR+ + R
Sbjct: 444 GQDRDRNREGYRGQDRDRSPEGDRERSRERNRDRSREG-----NRGQDRDRNQEGYR--- 495
Query: 398 KHERDRHGERDYDPTDQEDDRG-WYDHHENYEHHRG 432
+RDR E D + + +E +RG D N E +RG
Sbjct: 496 GQDRDRSREGDRERS-KEKNRGRGQDRDRNREGYRG 530
>gi|195490501|ref|XP_002093167.1| GE20934 [Drosophila yakuba]
gi|194179268|gb|EDW92879.1| GE20934 [Drosophila yakuba]
Length = 1080
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
+R +DR RSRER R +ER+ K+ +LS DR +D + ++R R+ +R+R ++R
Sbjct: 539 ERQRSKDRHRSRERQRSKERQLSKNRQLSKDRQLSKDRQG---LKERQRSNERKRSKERQ 595
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDP 378
+DR R+R+R +DR R ER R K+ + +DR R++ER+R R+ +P
Sbjct: 596 HSKDRQRSRERQPSKDRQRSKERQRSKEPQQSKDRQRSKERQRSRERPAKEP 647
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 274 RERSRERGRDREREREKSLELSHDRPRDRD------HRDDRH---HRDRDRTRDRERERD 324
R RSRER + R E S++ H + R+R + +RH +DR R++++ R RD
Sbjct: 362 RSRSRERKDTKSRPLEASIDSRHHKARERSAATPPRKQPERHRERSKDRQRSKEKHRSRD 421
Query: 325 RGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 375
R R ++R R+++R R ++R R ER R K+R + +++ R++ER+R R +V
Sbjct: 422 RLRSKERQRSKERQRSKERPRSRERQRSKERQRSKEKQRSKERQRSRSKDV 472
>gi|313212785|emb|CBY36708.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 130 PNVSGDPYK-TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMH 188
P+ +P K LFV +L+ TT+ ++ F +G IK ++ D+ TN+ YAFIE+
Sbjct: 176 PSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFAT 235
Query: 189 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 229
D + AY + D +D RR+ VD + WR + G
Sbjct: 236 DDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKWRQWKFQG 275
>gi|195452564|ref|XP_002073409.1| GK13166 [Drosophila willistoni]
gi|194169494|gb|EDW84395.1| GK13166 [Drosophila willistoni]
Length = 594
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LF+ +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFICKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFDEQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWR 223
Y + D +D RR+ VD + WR
Sbjct: 298 YFKMDNVLVDDRRIHVDFSQSVAKIKWR 325
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++V L +E TE + F +G I V LV DKET K RG+ F+ Y R A
Sbjct: 162 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 221
Query: 200 DGRKLDGRRVLVD 212
+G ++ GR + VD
Sbjct: 222 NGTQIIGRTLKVD 234
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L Y TE+ ++ FE +G I ++L+ D + N+ +GY FI + D K A Q
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQL 366
Query: 200 DGRKLDGRRVLVD-----VERGRTVPNW 222
+G +L GR + V+ E+G+ P++
Sbjct: 367 NGFELAGRPMKVNHVTERNEQGQQAPSF 394
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+T+FV +LS E ++K F S G ++ V+++TD+ + + +G ++EY D
Sbjct: 208 RTVFVMQLSQRAKERELKEFFSSVGKVRTVKIITDRNSRRSKGVGYVEY-DVADSVPLAL 266
Query: 198 QADGRKLDGRRVLV 211
+ +KL G ++V
Sbjct: 267 GLNNQKLLGVPIIV 280
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 116 KAAEELKKYDPHNDPNVSG-DPYKT----LFVARLSYETTESKIKREFESYGPIKRVRLV 170
K +E K N SG PY L+V L + TE+ ++ FE++GP++ V+L
Sbjct: 304 KPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLP 363
Query: 171 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
D E+ +G+ F+++ H KAA ++ GR + V
Sbjct: 364 LDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKV 404
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 116 KAAEELKKYDPHNDPNVSG-DPYKT----LFVARLSYETTESKIKREFESYGPIKRVRLV 170
K +E K N SG PY L+V L + TE+ ++ FE++GP++ V+L
Sbjct: 304 KPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLP 363
Query: 171 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
D E+ +G+ F+++ H KAA ++ GR + V
Sbjct: 364 LDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKV 404
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+T+F ++ + TE + F G ++ VRL+ D+ + + +G ++E+ + A
Sbjct: 231 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIA 290
Query: 198 QADGRKLDGRRVLV 211
+ G+ L G+ V+V
Sbjct: 291 LS-GQLLLGQPVMV 303
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TES+++ FE +GP++ V+L D ET +G+ F+++ H KAA
Sbjct: 295 LYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLN 354
Query: 200 DGRKLDGRRVLVDV 213
++ GR + V
Sbjct: 355 GKLEIAGRTIKVSC 368
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV + Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 412 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 471
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 472 NGIKMGDKTLTV 483
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 303 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 338
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 267 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 316
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 359
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV + Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 410 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 469
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 470 NGIKMGDKTLTV 481
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 303 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 338
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 267 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 316
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 359
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV + Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 412 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 471
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 472 NGIKMGDKTLTV 483
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 303 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 338
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 267 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 316
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 359
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 362
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV + Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 397 IFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 456
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 457 NGIKMGDKTLTV 468
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 303 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 338
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 267 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 316
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 359
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|451994412|gb|EMD86882.1| hypothetical protein COCHEDRAFT_1185111 [Cochliobolus
heterostrophus C5]
Length = 477
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 100 ERRARIHKLRLEKG-----AEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ER AR L LE AE A E LFV +L+ T + +
Sbjct: 224 EREARAQALTLEMVGDLPFAEVAPPE-----------------NVLFVCKLNPVTQDEDL 266
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+ F +G I ++ DK T YAFIEY + +D + AY + DG +D R+ VD
Sbjct: 267 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFS 326
Query: 215 RG--------RTVPNWRPRRLGGGLG 232
+ R V N + RR GG G
Sbjct: 327 QSVSKIADDWRDVTNKKRRRAAGGFG 352
>gi|158297018|ref|XP_317325.4| AGAP008136-PA [Anopheles gambiae str. PEST]
gi|157014993|gb|EAA12690.4| AGAP008136-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I ++ E+ A+ A L+ D +++ P LFV +L+ TT+ ++ F +G I
Sbjct: 208 IAEMIAEREAKARATILEIVGDIPDADIA-PPENVLFVCKLNPVTTDDDLQIIFSRFGKI 266
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 223
++ DK T YAFIE+ + + + AY + D +D RR+ VD + + WR
Sbjct: 267 VGCEVIRDKLTGDSLQYAFIEFENQKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKIKWR 325
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P +LFV ++ + ++REF YGPI V + D T +PRG+A++++ RD + A
Sbjct: 8 PNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDA 67
Query: 196 YKQADGRKLDGRRVLVDVERG-RTVPN 221
D + + GR++ + +G R PN
Sbjct: 68 LHNLDKKWICGRQIEIQFAQGDRKTPN 94
>gi|451846305|gb|EMD59615.1| hypothetical protein COCSADRAFT_126954 [Cochliobolus sativus
ND90Pr]
Length = 481
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 100 ERRARIHKLRLEKG-----AEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ER AR L LE AE A E LFV +L+ T + +
Sbjct: 228 EREARAQALTLEMVGDLPFAEVAPPE-----------------NVLFVCKLNPVTQDEDL 270
Query: 155 KREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 214
+ F +G I ++ DK T YAFIEY + +D + AY + DG +D R+ VD
Sbjct: 271 ELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYANQKDCEQAYFKMDGVLIDDHRIHVDFS 330
Query: 215 RG--------RTVPNWRPRRLGGGLG 232
+ R V N + RR GG G
Sbjct: 331 QSVSKIADDWRDVTNKKRRRAAGGFG 356
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P +LFV ++ + ++REF YGPI V + D T +PRG+A++++ RD + A
Sbjct: 8 PNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDA 67
Query: 196 YKQADGRKLDGRRVLVDVERG-RTVPN 221
D + + GR++ + +G R PN
Sbjct: 68 LHNLDKKWICGRQIEIQFAQGDRKTPN 94
>gi|115477030|ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|42408488|dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113624080|dbj|BAF24025.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|125561991|gb|EAZ07439.1| hypothetical protein OsI_29693 [Oryza sativa Indica Group]
gi|125603835|gb|EAZ43160.1| hypothetical protein OsJ_27752 [Oryza sativa Japonica Group]
gi|215694980|dbj|BAG90171.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 603
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLFV L + TT++ ++ E YGP+K VR +K + K +GY +++ A +
Sbjct: 184 TLFVGELHWWTTDADLEAELIKYGPVKEVRFFDEKASGKSKGYCQVDFYDPAVATACKEA 243
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+G +GR +V +V RR+G
Sbjct: 244 MNGHLFNGRPCVVAFASPNSV-----RRMG 268
>gi|281206242|gb|EFA80431.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Polysphondylium pallidum PN500]
Length = 539
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ +T+ ++ F S+G I+ ++ D TN YAF+EY + + A
Sbjct: 248 PENVLFVCKLNPDTSSEDLELCFSSFGNIRSCEVIRDPVTNDSLCYAFVEYETKKQCETA 307
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
Y + + +D RR+ VD + + + G G GG+ +N
Sbjct: 308 YSKMENALIDERRIHVDFCQ-----SIAKVKFGYGAKKFLSGGKRINS 350
>gi|313227010|emb|CBY22157.1| unnamed protein product [Oikopleura dioica]
Length = 434
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 130 PNVSGDPYK-TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMH 188
P+ +P K LFV +L+ TT+ ++ F +G IK ++ D+ TN+ YAFIE+
Sbjct: 236 PSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIKTAEIIRDRRTNQSLQYAFIEFAT 295
Query: 189 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 229
D + AY + D +D RR+ VD + WR + G
Sbjct: 296 DDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKWRQWKFQG 335
>gi|219115463|ref|XP_002178527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410262|gb|EEC50192.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 638
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 119/276 (43%), Gaps = 18/276 (6%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LF+ +L+ T + ++ F + P +V ++ D+ T K YAF E+ + A
Sbjct: 313 PENVLFICKLNPITQDEDLELIFSRFDPTVKVEIIRDQSTGKSLQYAFAEFEEKQQAVEA 372
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + + +D RR+ VD + + W + T GG N +G RG
Sbjct: 373 YFKMNNALVDDRRIKVDFSQSVS-KIWNKYTQKMRMPTGGPGGTFQNSASTGPGVSRGRG 431
Query: 256 PSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD--- 312
S + G + R+ +R R ER +S S +R D HRD R D
Sbjct: 432 GRHSCQ--------GGNWQVRNDDRHRPSERSDMRSYYGSPNRSNDDRHRDSRRSADARK 483
Query: 313 RDRTRDR--ERERDRGRERDRDRTRDRDRGRDRGRDHERDREK-DRDKERDRDRTRERER 369
D RD +RER R + DR+ R RGR + DR K D DR+ RER
Sbjct: 484 MDWQRDHRDKRERQRSDDPSSHSKGDRNGSRHRGRAGDGDRRKRDERTHEDRENDRERHY 543
Query: 370 DRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG 405
+ + G D R +S R +YDR++ K +DR G
Sbjct: 544 HTERDAGRIDDGRSHSVRR--EYDRVERKR-KDRTG 576
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V L++ T +KR F +G ++ V L D T KPRG+AF+E+ D A +
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 199 ADGRKLDGRRVLV 211
DG LDGR + V
Sbjct: 94 LDGYNLDGRNISV 106
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T +S ++ F +G I ++ DK T YAFIE+ + + A
Sbjct: 238 PENVLFVCKLNPVTADSDLQIIFSRFGKIVGCEVIRDKVTGDSLQYAFIEFEDKKSCETA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWR 223
Y + D +D RR+ VD + + WR
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVSKIKWR 325
>gi|340914863|gb|EGS18204.1| hypothetical protein CTHT_0062190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 344
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%)
Query: 126 PHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIE 185
P + N + +P LFV + ES+I R FE YG +++ +++ D T + RG+ F++
Sbjct: 60 PKEEDNSAVNPGSNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHTGESRGFGFVK 119
Query: 186 YMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
M + +AA + G ++GR + ++ R
Sbjct: 120 MMTSEQAEAAMEGLKGEIIEGRTLNIEKAR 149
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ + + TE+ I F +GPIK + L D T + RG+ FIEY + A +
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQNM 664
Query: 200 DGRKLDGRRVLVDVERGRTVPNWRP 224
+ + + GR++ V R ++P P
Sbjct: 665 NQKTISGRQIKV---RQPSIPVINP 686
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++V + + TE +IK F S G + L + ET + GY FI+Y + + + A
Sbjct: 744 VYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAISTF 803
Query: 200 DGRKLDGRRVLV 211
+G ++GR++ V
Sbjct: 804 NGYDINGRQLKV 815
>gi|193786989|dbj|BAG51812.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 15/99 (15%)
Query: 164 IKRVRLVTDKETNKPRGYAFIEYMHTR-------------DMKAAYKQADGRKLDGRRVL 210
+ RVR+ D +T RG+ + TR + AAYK ADG+K+DGRRVL
Sbjct: 22 VGRVRVRDDGDTG--RGFCRAGPVLTRGPSGDSSPLPLPTSVTAAYKHADGKKIDGRRVL 79
Query: 211 VDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 249
VDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 80 VDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 118
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L YE +E I F YG V LV DKET K +G+AF++Y R A
Sbjct: 35 VYIGGLPYEVSEGDIVTIFSQYGEPVYVNLVRDKETGKSKGFAFLKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G K+ GR + VD
Sbjct: 95 SGAKVMGRIISVD 107
>gi|5912017|emb|CAB55969.1| hypothetical protein [Homo sapiens]
gi|119572830|gb|EAW52445.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_a [Homo sapiens]
Length = 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 164 IKRVRLVTDKETNKPRGYAFIEYMHTR-------------DMKAAYKQADGRKLDGRRVL 210
+ RVR+ D +T RG+ + TR + AAYK ADG+K+DGRRVL
Sbjct: 22 VGRVRVRDDGDTG--RGFCRAGPVLTRGPSGDSSPLPLPTSVTAAYKHADGKKIDGRRVL 79
Query: 211 VDVERGRTVPNW 222
VDVERGRTV W
Sbjct: 80 VDVERGRTVKGW 91
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 266 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR 325
E+RHG + + GR+RE E+ E +R R+RD R D+ DR+R+R+R++ RD+
Sbjct: 293 EERHGSWNTQ-----GREREMNWEQRREQGRERSRERDQRRDK---DRERSRERDQRRDK 344
Query: 326 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
RER RDR R++GR+ RD DR + R+KE++R R RE +RD
Sbjct: 345 DRERSRDRDLRREKGREGSRDSSVDRYRRREKEQERSRDREVDRD 389
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 20/162 (12%)
Query: 271 DRDRERSRERGR--------DREREREKSLELSHDRPRDRDHRDDRHHR---DRDRTRDR 319
D+ R++ RER R DRER R++ L R RD DR+ R +++R+RDR
Sbjct: 325 DQRRDKDRERSRERDQRRDKDRERSRDRDLRREKGREGSRDSSVDRYRRREKEQERSRDR 384
Query: 320 ERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPD 379
E +RD R++ ++R+ DR+ RD+ ++ + +R DR+ DR R RE+ R R+ E+ D
Sbjct: 385 EVDRDLKRQKQQERSWDREVDRDQRKERQWERSLDREMINDRRREREQGRSREEEL---D 441
Query: 380 RDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWY 421
+ R +DR D + +ERDR ER +E DRG Y
Sbjct: 442 KKRQKEKDRSKDKS-MSRANERDRDWER-----VKETDRGSY 477
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 21/106 (19%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
DR DRD+ +ER+ E+SL DR+ +DR R+R++ R RE E D+
Sbjct: 401 DREVDRDQR--------KERQWERSL--------DREMINDR-RREREQGRSREEELDKK 443
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
R++++DR++D + R +ERDR+ +R KE DR ERER RD
Sbjct: 444 RQKEKDRSKD----KSMSRANERDRDWERVKETDRGSYAERERARD 485
>gi|307195699|gb|EFN77541.1| hypothetical protein EAI_11554 [Harpegnathos saltator]
Length = 1164
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 296 HDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR----DRGRDHERDR 351
+DR RDR RD R +DR+ +R +RDRGR +D +R DRDRGR +R D +R R
Sbjct: 514 YDRERDRGSRDRALDRGKDRSPERALDRDRGRSQDPERPSDRDRGRSQDRERTSDRQRGR 573
Query: 352 EKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 394
+DR+ DRDR R ++R+R DR RG S+DR+ DR
Sbjct: 574 SQDREGTSDRDRGRSQDRER-----TSDRQRGRSQDREGTSDR 611
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 254 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 313
RG RS E + DR +D ER +R R R ++RE++ + R +DR+ DR DR
Sbjct: 529 RGKDRSPERALDRDRGRSQDPERPSDRDRGRSQDRERTSDRQRGRSQDREGTSDR---DR 585
Query: 314 DRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD------REKDRDKERDRDRTRER 367
R++DRER DR R R +DR DRGR R RD +R R DRD++ +R R R
Sbjct: 586 GRSQDRERTSDRQRGRSQDREGTSDRGRGRSRDPDRQERPYSPRLLDRDRDAERSRASSR 645
Query: 368 ERD 370
+D
Sbjct: 646 AKD 648
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V +S+ TT + FE YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
DGR +DGR ++ V+ + PN P + G
Sbjct: 77 LDGRNVDGRNIM--VQFAKYGPNAEPIQKG 104
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V +S+ TT + FE YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
DGR +DGR ++ V+ + PN P + G
Sbjct: 77 LDGRNVDGRNIM--VQFAKYGPNAEPIQKG 104
>gi|346467965|gb|AEO33827.1| hypothetical protein [Amblyomma maculatum]
Length = 488
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +GP+K ++ DK+T YAF+E+ + A
Sbjct: 238 PENVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDKKTGDSLQYAFVEFEQRDHCENA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR---EQEP 252
Y + D +D RR+ VD + W+ G G G V ++ R R ++
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVAKLRWK----GKGRGVEHVDEKQKKPRGGARYELKETA 353
Query: 253 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD 312
RG + ED G ER ERG E++RE + S+DR R R D H
Sbjct: 354 RRGAENQYDLVFSEDEEGPGG-ERV-ERGH-IEKKREGHRD-SNDR---RATRSDGHRDS 406
Query: 313 RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
RD GR+R + RDR D R +D D++ RD +ER+++
Sbjct: 407 RDSG---------GRDRHSNTHRDRH------GDSHRSTRRDHDRKSHRDEHHRKEREKE 451
Query: 373 Y 373
Y
Sbjct: 452 Y 452
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFVA L + TTE +++ F +G +K +++ ++ K +GYAF+E + A ++
Sbjct: 172 ALFVANLEWWTTEQNLEQLFSEFGKLKNLKIFENETNGKSKGYAFVELQSHDIARQAKEK 231
Query: 199 ADGRKLDGRRVLV 211
+ ++L+G+ +++
Sbjct: 232 LNNKELNGKTIII 244
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
K+LFV ++ + + ++ REF YG IK V + D +PRG+A++++ D + A +
Sbjct: 11 KSLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQE 70
Query: 198 QADGRKLDGRRVLVDVERG 216
DGRK+ GR + V +G
Sbjct: 71 GMDGRKVCGRFIDVQFAKG 89
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 111/274 (40%), Gaps = 46/274 (16%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L YE +E I F +G V L+ DK+T K +G+AF++Y R A
Sbjct: 35 VYIGGLPYELSEGDIITIFSQFGEPVHVNLIRDKDTGKSKGFAFLKYEDQRSTNLAVDNL 94
Query: 200 DGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG-------GEEVNQRYSGREQEP 252
G + GR + VD R + LG G G E ++R G+ +E
Sbjct: 95 GGATILGRIIRVDHTRYKPKEGELEELLGQGSGPRDRDDGDDDDESEHHSKRRRGKGRED 154
Query: 253 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD 312
P R P E + RD + R++++ +EL+ + + R+ + H RD
Sbjct: 155 M--PPREMLPEEIELQKLIRDHDEDDPMKEYLVRQKKEQVELALQKLK-REKKSSHHRRD 211
Query: 313 RDRTRDR----------------------------------ERERDRGRERDRDRTRDRD 338
D RD R ++RGR+ R + DRD
Sbjct: 212 GDSKRDHRHSHRHRSRSEGRSRRHRSRSKEQTHKERASEEPSRSQERGRDGRRGKYHDRD 271
Query: 339 RGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
GRD+G+D RDR D D +R E+ER RD
Sbjct: 272 GGRDKGKD--RDRYGDWDGDRGGSSRLEKERGRD 303
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 58/78 (74%), Gaps = 13/78 (16%)
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG 376
++++R++DR +E+DRD+ R++++ RD+ R+ E+DR++DR+KE+DRDR++E++RD+D
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQD---- 1935
Query: 377 DPDRDRGYSRDRDSDYDR 394
R+++ D DR
Sbjct: 1936 ---------RNKEKDRDR 1944
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 61/95 (64%), Gaps = 23/95 (24%)
Query: 276 RSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTR 335
+ ++R +DR +E++ RD+DR ++++R++DR +E+DRD +
Sbjct: 1880 KEKDRDQDRSKEKD---------------------RDQDRNKEKDRDQDRNKEKDRD--Q 1916
Query: 336 DRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
DR++ +DR R E+DR++DR+KE+DRDR R +E+D
Sbjct: 1917 DRNKEKDRDRSKEKDRDQDRNKEKDRDRDRSKEKD 1951
>gi|291245145|ref|XP_002742452.1| PREDICTED: THO Complex (transcription factor/nuclear export)
subunit family member (thoc-2)-like [Saccoglossus
kowalevskii]
Length = 982
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 12/98 (12%)
Query: 278 RERGRDRERER--EKSLEL-------SHDRPRDRDHRDDR-HHRDRDRTRDRERERDRGR 327
RER RDRE+ER EK E +H+ R +D DDR + R T +E+E ++ R
Sbjct: 829 RERDRDREKERKSEKKREYHADGEKETHEVKRRKD--DDRASSKSRHSTDGKEKESEKNR 886
Query: 328 ERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 365
ER+R++ RD+ RDRG+D ER + KDRD+E+D+D+T+
Sbjct: 887 EREREKEHHRDKERDRGKDRERGKSKDRDREKDKDKTK 924
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V +++ TT + F+ YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 199 ADGRKLDGRRVLVDVER 215
DGR LDGR ++V +
Sbjct: 77 LDGRMLDGREIMVQFAK 93
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V +S+ TT + F+ YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
DGR +DGR ++ V+ + PN P R G
Sbjct: 77 LDGRNVDGRNIM--VQFAKYGPNAEPIRKG 104
>gi|449462395|ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
Length = 699
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV L + TT+++++ E YGP+K V+ +K + K +GY +E+ + A +
Sbjct: 221 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEG 280
Query: 199 ADGRKLDGRRVLV 211
+G +GR +V
Sbjct: 281 MNGHIFNGRPCVV 293
>gi|825727|emb|CAA30303.1| hU1-70K protein (286 AA) [Homo sapiens]
Length = 285
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
+ + AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SG
Sbjct: 1 YNTSVYAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSG 60
Query: 248 RE 249
R+
Sbjct: 61 RD 62
>gi|307166099|gb|EFN60351.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Camponotus floridanus]
Length = 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ D +T YAFIE+ + + A
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEDA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 231
Y + D +D RR+ VD + WR + G G+
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVAKMRWRGK--GKGI 331
>gi|449506411|ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
[Cucumis sativus]
Length = 724
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV L + TT+++++ E YGP+K V+ +K + K +GY +E+ + A +
Sbjct: 246 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEG 305
Query: 199 ADGRKLDGRRVLV 211
+G +GR +V
Sbjct: 306 MNGHIFNGRPCVV 318
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P + G +L V L+Y TT +KR FE YG + V + T + RG+AF+ +
Sbjct: 8 PQIDG--MTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDCEDAMDSLDGYILDGRELRVQMAR 91
>gi|350407880|ref|XP_003488226.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Bombus
impatiens]
Length = 502
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ D++T YAFIE+ + + A
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDRQTGDSLQYAFIEFADRKSCEEA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT-------RVGGEEVNQRYSGR 248
Y + D +D RR+ VD + W+ G G G VG E + + S
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVAKMRWK----GKGKGVQYFDDEADEVGNENLEKVISKH 353
Query: 249 EQEPSRGPSRSAEPRIRE-DRHGDRDRERSRERGRDREREREK 290
+Q R RS E R+ +R D ++ + RD+ E+EK
Sbjct: 354 KQ---RDEPRSKEIEHRKYERIKDANKAKVYSYNRDKYIEKEK 393
>gi|414869233|tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea mays]
Length = 596
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLFV L + TT++ ++ E YG +K VR +K + K +GY +++ A +
Sbjct: 177 TLFVGELHWWTTDADLESELIKYGSVKEVRFFDEKASGKSKGYCQVDFYDPGAAAACKEA 236
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+G +GR +V +V RR+G
Sbjct: 237 MNGHTFNGRPCVVAFATPNSV-----RRMG 261
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L V +S+ TT + F+ YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
DGR +DGR ++ V+ + PN P R G
Sbjct: 77 LDGRNVDGRNIM--VQFAKYGPNAEPIRKG 104
>gi|115479739|ref|NP_001063463.1| Os09g0476100 [Oryza sativa Japonica Group]
gi|52077336|dbj|BAD46377.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113631696|dbj|BAF25377.1| Os09g0476100 [Oryza sativa Japonica Group]
gi|125606072|gb|EAZ45108.1| hypothetical protein OsJ_29744 [Oryza sativa Japonica Group]
gi|215712236|dbj|BAG94363.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 604
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLFV L + TT++ ++ E YG +K VR +K + K +GY +++ + +
Sbjct: 186 TLFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKEG 245
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+G +GR +V TV RR+G
Sbjct: 246 MNGHLFNGRPCVVAFASPHTV-----RRMG 270
>gi|125564102|gb|EAZ09482.1| hypothetical protein OsI_31754 [Oryza sativa Indica Group]
Length = 604
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TLFV L + TT++ ++ E YG +K VR +K + K +GY +++ + +
Sbjct: 186 TLFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKEG 245
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLG 228
+G +GR +V TV RR+G
Sbjct: 246 MNGHLFNGRPCVVAFASPHTV-----RRMG 270
>gi|383847372|ref|XP_003699328.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Megachile rotundata]
Length = 507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ DK+T YAFIE+ + + A
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDKQTGDSLQYAFIEFAERKSCEEA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 231
+ + D +D RR+ VD + W+ + G G+
Sbjct: 298 FFKMDNVLIDDRRIHVDFSQSVAKMRWKGK--GKGI 331
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 361 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 420
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 421 NGIKMGDKTLTV 432
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 122 KKYDPHNDPNVSGDPY-----KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETN 176
+KYD N + S D +L+VA LS +S ++ FE YG I++ +V D T+
Sbjct: 87 RKYDRGNKRSGSNDSATNNQGSSLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITS 146
Query: 177 KPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
+ RG+AF+ Y + +D + + + +G L G+ + V+
Sbjct: 147 ESRGFAFVVYDNPQDAEDSLSKLNGYDLLGKEIRVE 182
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
PN+ G TL V + Y ++ ++R FE YG + V + D T +PRG+AF+ +M
Sbjct: 21 PNIEG--MVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQ 78
Query: 190 RDMKAAYKQADGRKLDGRRVLV 211
RD A + DG GR + +
Sbjct: 79 RDADDAIDRMDGEFFAGRELRI 100
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ ++
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ ++
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR-------PRRLGG 229
RD + A DG LDGR + V + R P+ PRR GG
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRSAPPRRYGG 112
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 325 IFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 384
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 385 NGIKMGDKTLTV 396
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ ++
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|449462397|ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
Length = 697
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV L + TT+++++ E YGP+K V+ +K + K +GY +E+ A +
Sbjct: 221 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEG 280
Query: 199 ADGRKLDGRRVLV 211
+G +GR +V
Sbjct: 281 MNGHIFNGRPCVV 293
>gi|449516543|ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
Length = 697
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV L + TT+++++ E YGP+K V+ +K + K +GY +E+ A +
Sbjct: 221 ILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEG 280
Query: 199 ADGRKLDGRRVLV 211
+G +GR +V
Sbjct: 281 MNGHIFNGRPCVV 293
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P +L V L + ++ +FE YG +K V + D T +PRG+ F+E+ TRD + A
Sbjct: 15 PRVSLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDA 74
Query: 196 YKQADGRKLDGRRVLVDVER-GRTVP 220
D ++GR + V R GR P
Sbjct: 75 MYSLDRSTINGREISVTFSREGRKTP 100
>gi|388854907|emb|CCF51410.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Ustilago hordei]
Length = 557
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T ++ F +G I ++ DK+T YAFIE+ D + A
Sbjct: 261 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERA 320
Query: 196 YKQADGRKLDGRRVLVDVER--GRTVPNWRPRRLGG---GLGTTRVGGEEVNQRYSGREQ 250
Y + +D RR+ VD + R +W +R GG G + GGE R+
Sbjct: 321 YFKMQNVLVDDRRIWVDFSQSVSRLHGDWVRKRNGGREAPKGHYKWGGE------GRRDD 374
Query: 251 EPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH 310
S + S PR ++G ER RD ER E+S RD D RH
Sbjct: 375 GQSNSGADSYRPRAGGYQNG--------ERWRDGERYGERSSR--------RDEGDRRHR 418
Query: 311 ----RDRDRTRDRERERDRGRERDRD 332
+DRDR R R D G E RD
Sbjct: 419 NGEDQDRDRAYKRSRRHDEGTESRRD 444
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 281 GRDREREREKSLELSHDRPRDR--DHRDDRHHRDRDRTRD--RERERDRGRERDRDRTRD 336
GR RER + E S D P + ++R R DR R RD + ERDRGR RDR RD
Sbjct: 2154 GRQRERFEGGTKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNWSRDRERD 2213
Query: 337 RDRGRD----RGRDHERDREKDRDKERDRDRTRERERDRDY 373
DR RD R +D RD +K++++ +RD+ RE ER++++
Sbjct: 2214 WDRNRDWERHREKDSNRDWDKNKERNPNRDKERESERNKEW 2254
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 273
+RG T + PR G E+ R+ + Q P +G + P + H +
Sbjct: 2051 QRGPTPLQFGPR----GAAPFSEKNEQPPSRFHFQGQSP-QGIKPAPRPLLELPSHPPQH 2105
Query: 274 R-ERSRERGRDREREREKSLELSHDRPR--DRDHRDDRHHRDRDRTRD-RERERDRGRER 329
R ER E G S + S + D RD + H R++ + R+RER G +
Sbjct: 2106 RKERWEEAGPSAPLPTNVSGQASESESQWPSSDFRDGKSHEYRNQAFEGRQRERFEGGTK 2165
Query: 330 DR-------------------DRTRDRDRG----RDRGRDHERDREKDRDKERDRDRTRE 366
++ DR RDRD G RDRGR+ RDRE+D D+ RD +R RE
Sbjct: 2166 EKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNWSRDRERDWDRNRDWERHRE 2225
Query: 367 RERDRDYEVGDPDRDRGYSRDRDSDYDR 394
++ +RD+ D +++R +RD++ + +R
Sbjct: 2226 KDSNRDW---DKNKERNPNRDKERESER 2250
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 20/118 (16%)
Query: 242 NQRYSGREQEPSRGPSR---SAEP--RIREDRHG--DRDRERSRERGRDREREREKSLEL 294
NQ + GR++E G ++ S EP ++ E+R G DR R R+ G+ ER+R ++
Sbjct: 2149 NQAFEGRQRERFEGGTKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNW-- 2206
Query: 295 SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDRE 352
S DR R D DR RD ER R++ RD D+ ++R+ RD+ R+ ER++E
Sbjct: 2207 SRDRER-----------DWDRNRDWERHREKDSNRDWDKNKERNPNRDKERESERNKE 2253
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 117 AAEELKKYDPHNDPNVSGDPYKT----LFVARLSYETTESKIKREFESYGPIKRVRLVTD 172
A + L + + + V G PY L+V L + TE+ ++ FE +G I+ V+L D
Sbjct: 279 AEKNLVQSNASSGAAVVG-PYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLD 337
Query: 173 KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
ET +G+ F+++ H KAA ++ GR + V
Sbjct: 338 METGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKV 376
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+T+F ++ + TE + F G ++ VRL+ D+ + + +G +IE+ + A
Sbjct: 202 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIA 261
Query: 198 QADGRKLDGRRVLV 211
+ G+ L G+ V+V
Sbjct: 262 LS-GQLLLGQPVMV 274
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 52/275 (18%)
Query: 129 DPNVSGDPYKTLFVARLSYETTES-KIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYM 187
DP+ + +T++V L+ +TT + ++ F+ G +K VR+ D+ +P +AF+E+
Sbjct: 173 DPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDE--TQPTRFAFVEFA 230
Query: 188 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTV--PNWRPRRLGGGLGTTRVGGEEV---- 241
+ A +G R + ++ V P P+ L EEV
Sbjct: 231 DQNSVPRAL-AFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKEL-------EEVMKRV 282
Query: 242 --NQRYSGREQEPSRG-------------------------------PSRSAEPRIREDR 268
Q + EP G PS+ R
Sbjct: 283 REAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSPSKHRSRSHNRSR 342
Query: 269 HGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRE 328
+DR RS+ + R + +E+ + R RD+ + + +++ R RE+ERDR RE
Sbjct: 343 SRQKDRRRSKSPYKKRSKSKERRKSRTRSRSRDKKKEKENREKIKEKERLREKERDRDRE 402
Query: 329 RDRDRTRD--RDRGRDRGRDHERDREKDRDKERDR 361
R+++R+++ RDR +DR RD E+D+EK+++KERD+
Sbjct: 403 REKERSKNKERDREKDRERDREKDQEKEQEKERDK 437
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE +I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 437 NGIKMGDKTLTV 448
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 378 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 437
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 438 NGIKMGDKTLTV 449
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TE ++++ FE +G ++ V+L TD ET +G+ F+++ D +AA
Sbjct: 325 LYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLN 384
Query: 200 DGRKLDGRRVLVDV 213
+ GR + V V
Sbjct: 385 GQLDIAGRTIKVSV 398
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 353 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 412
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 413 NGIKMGDKTLTV 424
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 356 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 415
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 416 NGIKMGDKTLTV 427
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 273 DRERSRERG------RDREREREKSLELSHDRPRDRDHRDDR---HHRDRDRTRDRERER 323
DR RS RG R R+R K + +H + R R H R H RD+DR+ R+R
Sbjct: 375 DRGRSHSRGRDRRHSRGRDRSHSKGGDRNHSKGRGRSHSKGRGRSHSRDKDRSPSRDRSH 434
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKE----RDRDRTRERERDRDYEVGD 377
RGR+R + R R RDRG H RDR RD+ RDR+ +RER +DR +
Sbjct: 435 SRGRDRSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDRNHSRERSKDRSHS--- 491
Query: 378 PDRDRGYSRDRD 389
RDR S DRD
Sbjct: 492 KSRDRNKSSDRD 503
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 88/202 (43%), Gaps = 27/202 (13%)
Query: 230 GLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERERE 289
G G +R G + GR++ SRG RS DR+ + R RS +GR R R+
Sbjct: 366 GRGHSRDGSDRGRSHSRGRDRRHSRGRDRSHSKG--GDRNHSKGRGRSHSKGRGRSHSRD 423
Query: 290 K----SLELSHDRPRDRDHRDDR---HHRDR----DRTRDRERERDRGRERDRDRTRDRD 338
K S + SH R RDR H R H RDR R RDR RDR R RDR R+
Sbjct: 424 KDRSPSRDRSHSRGRDRSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDRNHSRE 483
Query: 339 RGRDRGRDHERDREKDRDK---ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRI 395
R +DR RDR K D+ + DR + G RDR + + RDS DR
Sbjct: 484 RSKDRSHSKSRDRNKSSDRDHYKSRHRSRSRNRADRSHSRG---RDRSHCKGRDSSTDRS 540
Query: 396 DSKHERDRHGERDYDPTDQEDD 417
H R + P++ D
Sbjct: 541 --------HNTRVWSPSNSSGD 554
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 247 GREQEPSRGPSRSA-----------------------EPRIREDRHGDR-DRERSRERGR 282
GR+ SRG RS R RE H DR D+ RS RGR
Sbjct: 295 GRDSSYSRGRDRSHRDRSDRSRSHSRDRSHSRGKDRRHSRGRERGHRDRIDKGRSNSRGR 354
Query: 283 DREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRD 342
DR R++S R R H D R R +R R+R RGR+R + DR+ +
Sbjct: 355 DRSCSRDRS-------DRGRGHSRDGSDRGRSHSRGRDRRHSRGRDRSHSKGGDRNHSKG 407
Query: 343 RGRDHERDR----EKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 394
RGR H + R +D+D+ RDR+ R RDR + G R R +SRDR S + R
Sbjct: 408 RGRSHSKGRGRSHSRDKDRSPSRDRSHSRGRDRSHSKG---RGRSHSRDRGSKHSR 460
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE +I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 359 IFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 418
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 419 NGIKMGDKTLTV 430
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 340 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 399
Query: 200 DGRKLDGRRVLV-DVERGRTVPN 221
+G K+ + + V +G T PN
Sbjct: 400 NGIKMGDKTLTVRRANQGITQPN 422
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 339 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 398
Query: 200 DGRKLDGRRVLV-DVERGRTVPN 221
+G K+ + + V +G T PN
Sbjct: 399 NGIKMGDKTLTVRRANQGITQPN 421
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L Y+ +E + F YG V LV DKET K RG+AF++Y R A
Sbjct: 35 IYIGGLPYDLSEGDVVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + GR + VD
Sbjct: 95 GGATVLGRMLRVD 107
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 378 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 437
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 438 NGIKMGDKTLTV 449
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 29 LQLKLIGQSHPTGLTA-----NLLK------LFEPRAPLEYKPPPEKRKCPPLTGMAQFV 77
+ ++L+ + GLT+ N+ K L E A LE+ P C FV
Sbjct: 347 MHMELVCLALIIGLTSESQYFNIFKYTKRYTLVELSA-LEFLFPYISLLC--------FV 397
Query: 78 SH----FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS 133
S + E D + P + + + + + K +E ++ V
Sbjct: 398 SFDCCRYIEFYDAMSVP----MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVV 453
Query: 134 GDPYKT----LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
G PY L+V L + TES+++ FE +G ++ V+L D ET +G+ FI++ H
Sbjct: 454 G-PYGAVDRKLYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHI 512
Query: 190 RDMKAAYKQADGRKLDGRRVLVD 212
KAA ++ GR + V
Sbjct: 513 EHAKAAQSLNGKLEIAGRTIKVS 535
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 329 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 388
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 389 NGIKMGDKTLTV 400
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 22/165 (13%)
Query: 261 EPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRD-RTRDR 319
EP+ + +D+E R + ++E +K + ++D+ + +D HH+++D R RD
Sbjct: 134 EPKTKASTSRSQDKENREGRELNLDKEEKKKITANNDKG---EQKDPAHHKEQDSRRRDG 190
Query: 320 ERERDRGRER--------------DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 365
E+E RGRER D+ ++RD+ +D+ R E+DRE+ ++++D++R R
Sbjct: 191 EKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKDKERDR 250
Query: 366 ERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 410
ERD+D E DR+R + RD+D + DR D H+ ERD D
Sbjct: 251 HHERDKDEER---DRERHHERDKDKEKDR-DRHHDSHAAPERDKD 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 272 RDRERSRERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRER--ERDRG 326
RD E+ RGR+R + ++ + H + D+ H RD + R R +DRER ERD+
Sbjct: 188 RDGEKEHHRGRERSDKHQRREQEGHTK--DKSHEQERDKEKDKARSREKDRERHHERDKD 245
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 386
+ERDR RD+D RDR R HERD++K++D++R D ERD+D + G RG R
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRG-----RGKER 300
Query: 387 DRDSDYDRIDSKHERDRHGERDYDPTD 413
R +R ER++ GE T+
Sbjct: 301 QR----ERNKEPEERNKSGESSNSKTN 323
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 75/117 (64%), Gaps = 12/117 (10%)
Query: 263 RIREDRHGDRDRE-RSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR--TRDR 319
R R D+H R++E ++++ ++ER++EK D+ R R+ +RHH +RD+ RDR
Sbjct: 198 RERSDKHQRREQEGHTKDKSHEQERDKEK------DKARSREKDRERHH-ERDKDKERDR 250
Query: 320 ERERDRGRERDRDR--TRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
ERD+ ERDR+R RD+D+ +DR R H+ +RDK++ R R +ER+R+R+ E
Sbjct: 251 HHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRGRGKERQRERNKE 307
>gi|356556666|ref|XP_003546644.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Glycine
max]
Length = 633
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + + F +G + ++ D++T YAFIE+ R + A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVSMAEIIRDQKTGDSLCYAFIEFEDKRSCEQA 300
Query: 196 YKQADGRKLDGRRVLVDVERG 216
Y + D +D RR+ VD +
Sbjct: 301 YFKMDNALIDDRRIHVDFSQS 321
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE +I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 437 NGIKMGDKTLTV 448
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE +I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 437 NGIKMGDKTLTV 448
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 371 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 430
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 431 NGIKMGDKTLTV 442
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE +I+ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 356 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 415
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 416 NGIKMGDKTLTV 427
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 371 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 430
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 431 NGIKMGDKTLTV 442
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 391 IFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 450
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 451 NGIKMGDKTLTV 462
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ +
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDN 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|308810142|ref|XP_003082380.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116060848|emb|CAL57326.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 485
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 110 LEKGAEKAAEELKKYDPHNDPNV---SGD--------PYKTLFVARLSYETTESKIKREF 158
L K A EE + + HN V GD P + LFV +L+ TT+ ++ F
Sbjct: 205 LNKDASVVEEEKRDREAHNRAVVLELIGDLPDAEAKPPEEGLFVCKLNPVTTDEDLEIIF 264
Query: 159 ESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
+G + ++ D +T GYAF+ + H + +AAY + D +D RRV VD +
Sbjct: 265 SRFGKVLSCDVIRDFKTGASLGYAFVNFEHRHEAEAAYFKMDNVLIDDRRVHVDFSQ 321
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P + LFV +L+ TT+ ++ F +G + ++ D +T GYAF+ + H + +AA
Sbjct: 242 PEEGLFVCKLNPVTTDEDLEIIFSRFGKVLSCDVIRDFKTGASLGYAFVNFEHRHEAEAA 301
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + D +D RRV VD + +R G GT+ + + SRG
Sbjct: 302 YFKMDNVLIDDRRVHVDFSQSMHHLWKNFKRFGKNGGTSE-------DHDAAEGKVSSRG 354
Query: 256 PSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRD--RDHRDDRHHRDR 313
R+ + G R KS + H + +D+ RDR
Sbjct: 355 MKRTFQ-------------------GSGRTTFELKSNAMGHISGGNAAMAMAEDKRDRDR 395
Query: 314 DRTRDRERERDRGRERDRDRTRDRDRGRDRGRDH 347
D+ R R+R RDR RE RDR+RDR GR+H
Sbjct: 396 DKGRTRDRSRDRDREHKRDRSRDR------GREH 423
>gi|322797592|gb|EFZ19633.1| hypothetical protein SINV_07432 [Solenopsis invicta]
Length = 508
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +L+ K A+ A L+ D +++ P LFV +L+ T + ++ F +G I
Sbjct: 226 IIELQKNKEAKARATILEIVGDIPDADIA-PPENVLFVCKLNPVTNDDDLEIIFSRFGKI 284
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 224
++ D +T YAFIE+ + + AY + D +D RR+ VD + WR
Sbjct: 285 VGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVLIDDRRIHVDFSQSVAKMRWR- 343
Query: 225 RRLGGGLGTTRVGGEEVNQR-----YSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 279
G G G + ++ ++ +S R++E SR DR DRD + R+
Sbjct: 344 ---GKGKGIKYLDEDDRAKKREENYFSSRKREASR------------DR--DRDNGKGRD 386
Query: 280 RGRDREREREKSLE 293
GR +E ++++S E
Sbjct: 387 EGRRKESDKDRSSE 400
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 378 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 437
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 438 NGIKMGDKTLTV 449
>gi|402220163|gb|EJU00235.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 224
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+ LFV+ S T + EFE YGP+ R + + N YAF+E+ + RD + AY
Sbjct: 7 RILFVSGFSSHTRAKDLAYEFEKYGPLVRCDVPATRNPNA-NPYAFVEFRYERDAEDAYY 65
Query: 198 QADGRKLDGRRVLVDVERGRTVPNWR 223
G ++D RR+ V + WR
Sbjct: 66 DMHGARIDDRRITVQWAKNPPSAIWR 91
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 117 AAEELKKYDPHNDPNVSGDPY----KTLFVARLSYETTESKIKREFESYGPIKRVRLVTD 172
A + L + + + V G PY + L+V L + TE+ ++ FE +G I+ V+L D
Sbjct: 279 AEKNLVQSNASSGAAVVG-PYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLD 337
Query: 173 KETNKPRGYAFIEYMHTRDMKAA 195
ET +G+ F+++ H KAA
Sbjct: 338 METGHCKGFGFVQFAHLEHAKAA 360
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+T+F ++ + TE + F G ++ VRL+ D+ + + +G +IE+ + A
Sbjct: 202 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIA 261
Query: 198 QADGRKLDGRRVLV 211
+ G+ L G+ V+V
Sbjct: 262 LS-GQLLLGQPVMV 274
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 436 NGIKMGDKTLTV 447
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 384 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 443
Query: 200 DGRKLDGRRVLVD 212
+G K+ + + V
Sbjct: 444 NGIKMGDKTLTVS 456
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ E++GP++ +V DKET +GYAF Y A
Sbjct: 394 IFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAAL 453
Query: 200 DGRKLDGRRVLV 211
+G +L R + V
Sbjct: 454 NGIQLGDRTLTV 465
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 386 VFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 445
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 446 NGIKMGDKTLTV 457
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 289 EKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHE 348
E+ L SH +P H D D D + R R+ DRD +R RD+ R++GRD E
Sbjct: 14 EEELHNSHHQP----HPDSSPLPTHDDLTD-SKSRHGSRDYDRDSSRSRDKEREKGRDRE 68
Query: 349 RDREKDRDKERDRDRTRERE 368
R REK RD+ER++ R R+ E
Sbjct: 69 RKREKGRDREREKSRDRDSE 88
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ +
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER-GRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 248
RD + A DG LDGR + V + R GR + RR G G+ GG + R +G
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGGNGVWRRDNGGLGGSAR-AGP 124
Query: 249 EQEPSRGPSRSAEP 262
P P+ A P
Sbjct: 125 APLPGINPAVLARP 138
>gi|390350507|ref|XP_003727432.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Strongylocentrotus purpuratus]
Length = 459
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT ++ F +G I ++ DK T Y+FIE+ D + A
Sbjct: 137 PENVLFVCKLNPLTTSEDLEIIFSRFGKISSCEVIKDKVTGDSLSYSFIEFEREEDCEEA 196
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
Y + D +D RR+ VD + N P G + GGE G
Sbjct: 197 YFKMDNVLIDDRRIHVDFSQSVAKLNMGP----SGPIIPQTGGESSKYAIKG 244
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P + G +L V L+Y TT +KR FE YG + V + T + RG+AF+ +
Sbjct: 8 PTIDG--MTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG +DGR + V + R
Sbjct: 66 RDCEDAMDALDGYMMDGRELRVQMAR 91
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 382 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 441
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 442 NGIKMGDKTLTV 453
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Query: 262 PRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRDRE 320
P + +D +R R+R ER RDRE ER++ E R R+ + + DR R RDR +R+
Sbjct: 86 PSLHQDGETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ 145
Query: 321 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
R+R+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E
Sbjct: 146 RDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETE 199
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 436 NGIKMGDKTLTV 447
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TES+++ FE +G ++ V+L D ET +G+ FI++ H KAA
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQSLN 522
Query: 200 DGRKLDGRRVLVD 212
++ GR + V
Sbjct: 523 GKLEIAGRTIKVS 535
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 382 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 441
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 442 NGIKMGDKTLTV 453
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ +
Sbjct: 8 PDVDG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGAILDGRELRVQMAR 91
>gi|255563498|ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
gi|223537989|gb|EEF39602.1| RNA-binding protein, putative [Ricinus communis]
Length = 702
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV L + TT+++++ E YG +K V+ +K + K +GY +E+ A +
Sbjct: 223 ILFVGELHWWTTDAELEAELCKYGVVKEVKFFDEKASGKSKGYCQVEFFDPAAAAACKEG 282
Query: 199 ADGRKLDGRRVLV 211
+G +GR +V
Sbjct: 283 MNGHLFNGRPCVV 295
>gi|356573339|ref|XP_003554819.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Glycine
max]
Length = 640
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + + F +G + ++ D +T YAFIE+ R + A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVSMAEIIRDHKTGDSLCYAFIEFEDKRSCEQA 300
Query: 196 YKQADGRKLDGRRVLVDVERG 216
Y + D +D RR+ VD +
Sbjct: 301 YFKMDNALIDDRRIHVDFSQS 321
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 320 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 379
Query: 200 DGRKLDGRRVLV-DVERGRTVPN 221
+G K+ + + V +G T PN
Sbjct: 380 NGIKMGDKTLTVRRANQGTTQPN 402
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAF---- 183
NDPN Y L+V L++ T+ +++ F+ +G I+ V L D+ T K +GYAF
Sbjct: 427 NDPN----SYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFTLLT 482
Query: 184 ---IEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
I + + D K A ++ +G +L GR + V++
Sbjct: 483 CVNIRFKNMHDAKNAMEKMNGFQLAGRALRVEI 515
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 137 YKTLFVARLSYETTESKIKREFES-YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
+++FV++LS + ++ + FE G ++ R++TD+ + + +G ++E+ ++ A
Sbjct: 305 MRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKGVGYVEFRELDSVQKA 364
Query: 196 YKQADGRKLDGRRVLV---DVERGR-TVPNWRPRRLGGGLGTT 234
G KL G V+V + E+ R + N +P + GL T
Sbjct: 365 LALT-GTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTV 406
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 343 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 402
Query: 200 DGRKLDGRRVLV-DVERGRTVPN 221
+G K+ + + V +G T PN
Sbjct: 403 NGIKMGDKTLTVRRANQGTTQPN 425
>gi|409050528|gb|EKM60005.1| hypothetical protein PHACADRAFT_138409 [Phanerochaete carnosa
HHB-10118-sp]
Length = 440
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
AE DPL P E+AE +LR +K AE +A L+ NV P
Sbjct: 199 IAEDEDPLATLPEEEAE----------ELRRKKAAEASALTLEMVGDLPFANVR-PPENV 247
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
LFV +L+ T + ++ F +G I +++ DK T YAFIE+ D + AY +
Sbjct: 248 LFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKRTGDSLQYAFIEFDRREDAEQAYFKM 307
Query: 200 DGRKLDGRRVLVDVER 215
+D RR+ VD +
Sbjct: 308 QNVLVDDRRIWVDFSQ 323
>gi|346318079|gb|EGX87684.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Cordyceps
militaris CM01]
Length = 505
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFVA+L+ T + ++ F +G I ++ D +T YAFIEY +AA
Sbjct: 249 PENVLFVAKLNPVTADEDLELIFGRFGKILSCEVIRDAKTQDSLQYAFIEYDEKASCEAA 308
Query: 196 YKQADGRKLDGRRVLVDVER 215
Y + G +D RR+ VD +
Sbjct: 309 YFKMQGVLIDDRRIHVDFSQ 328
>gi|432887647|ref|XP_004074952.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Oryzias
latipes]
Length = 2690
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 220 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS---RSAEPRIREDRHGDRDRER 276
PN + L GG +R +E +QR S + E +RG S RS R + D+H + +
Sbjct: 557 PNSAEKSLSGGPPESRRLKQE-SQRVSKPKHESNRGHSNDRRSDMVRQKHDQHSNSLHKE 615
Query: 277 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 336
E+ + R S R DD R ++R ++++R R+ + RDR++TRD
Sbjct: 616 --EKNNNSHRSSRPETPKSSGRADYNSRCDDDKVRHKERNKEKQRVREEDKHRDRNKTRD 673
Query: 337 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 394
RD+ ++ E + +KDR K+R++D+ RE+E D + D+D+G +RD+ D D+
Sbjct: 674 RDKSKEVEGPREAEIDKDRHKDREQDKDREKESIED-KTRSRDKDKGRNRDKIRDVDK 730
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 23/120 (19%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-----HRDRDRTRDRERE 322
RH +R++E+ R R D+ R+R K+ RDRD + D+DR +DRE++
Sbjct: 648 RHKERNKEKQRVREEDKHRDRNKT--------RDRDKSKEVEGPREAEIDKDRHKDREQD 699
Query: 323 RDRGRERDRDRTRDRDRGRDRGRDHERDREK----------DRDKERDRDRTRERERDRD 372
+DR +E D+TR RD+ + R RD RD +K ++DK+R R+RT+ +ERDR+
Sbjct: 700 KDREKESIEDKTRSRDKDKGRNRDKIRDVDKPREKEKDKEREKDKDRHRERTKGKERDRN 759
>gi|296082685|emb|CBI21690.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + + F +G + ++ D +T YAFIE+ + A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQA 300
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNW-----RPRRLGGGLGTTRVGG 238
Y + D +D RR+ VD + + W R + G G G + G
Sbjct: 301 YFKMDNALIDDRRIHVDFSQSVS-KLWSQYRRRDHQTGKGTGCFKCGA 347
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 346 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 405
Query: 200 DGRKLDGRRVLV-DVERGRTVPN 221
+G K+ + + V +G T PN
Sbjct: 406 NGIKMGDKTLTVRRANQGTTQPN 428
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 396 NGIKMGDKTLTV 407
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+GP++ LV D+ET +GYAF Y A
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 396 NGIKMGDKTLTV 407
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 24/91 (26%)
Query: 304 HRDDRHHRDRD------RTRDRERERDRGRERDRDRTRDRDRGRDR--------GRDHER 349
HR R HRDRD +RDRE+ R++ RDR++ R++D GR R GRD E+
Sbjct: 61 HRSSREHRDRDDGKEKDGSRDREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPEK 120
Query: 350 DREKD----------RDKERDRDRTRERERD 370
REKD +D RDRD+ RE+ERD
Sbjct: 121 VREKDEGRDREKIREKDSSRDRDKVREKERD 151
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 30/109 (27%)
Query: 267 DRHGDRDRERSRER--GRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERD 324
++ G RDRE+ RE+ GRDRE+ REK D R+R++ RE+D
Sbjct: 75 EKDGSRDREKVREKDEGRDREKVREK---------------------DGGRSREKVREKD 113
Query: 325 RGRERDRDRTRDRDRGRD----RGRDHERDREKDRDKERD-RDRTRERE 368
G RD ++ R++D GRD R +D RDR+K R+KERD RDR ERE
Sbjct: 114 EG--RDPEKVREKDEGRDREKIREKDSSRDRDKVREKERDGRDRLMERE 160
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L TE ++++ FE +G ++ V+L D T +G+ FI++ D KAA
Sbjct: 321 LYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQSLN 380
Query: 200 DGRKLDGRRVLV 211
+ GR + V
Sbjct: 381 GQLDIAGRVIKV 392
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
+T+F +LS + E + F G ++ VRL+ D+ + + +G +IE+ + A
Sbjct: 222 RTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 281
Query: 198 QADGRKLDGRRVLV 211
G+ L G+ V+V
Sbjct: 282 LT-GQPLLGQAVMV 294
>gi|328874752|gb|EGG23117.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 304
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P + L V L+ TTES + + F YG +++V L+ D++T R YAFI + + D +A
Sbjct: 110 PSRVLGVFGLNPRTTESDLDQVFSKYGKLEKVNLIRDRQTRSSRCYAFIYFDNKEDAVSA 169
Query: 196 YKQADGRKLDGRRVLVD 212
+ + +LDGR + +D
Sbjct: 170 KEGSLSLELDGRVIRID 186
>gi|359494535|ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis
vinifera]
Length = 627
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + + F +G + ++ D +T YAFIE+ + A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQA 300
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNW-----RPRRLGGGLGTTRVGG 238
Y + D +D RR+ VD + + W R + G G G + G
Sbjct: 301 YFKMDNALIDDRRIHVDFSQSVS-KLWSQYRRRDHQTGKGTGCFKCGA 347
>gi|449549425|gb|EMD40390.1| hypothetical protein CERSUDRAFT_110996 [Ceriporiopsis subvermispora
B]
Length = 466
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
AE DPL P E+AE ERR +K A +A L+ NV P
Sbjct: 199 IAEDEDPLATLPEEEAEK--ERR--------QKAAAASALTLEMVGDLPFANVR-PPENV 247
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
LFV +L+ T + ++ F +G I +++ DK T YAFIE+ D + AY +
Sbjct: 248 LFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKRTGDSLQYAFIEFDKREDAEQAYFKM 307
Query: 200 DGRKLDGRRVLVDVERG 216
+D RR+ VD +
Sbjct: 308 QNVLVDDRRIWVDFSQS 324
>gi|147817202|emb|CAN77549.1| hypothetical protein VITISV_017244 [Vitis vinifera]
Length = 710
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 12/108 (11%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRE-- 328
DRD+ER +ER R ++R+REK E S DR ++R++ DR D+ + +ER RD+ RE
Sbjct: 155 DRDKEREKERXRAKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKEREAD 214
Query: 329 RDRDRTRDRDRGRDRGRDHERDREKDRDKE----------RDRDRTRE 366
+DRDR +DRD+G + RD DR KD K+ RDRD T++
Sbjct: 215 QDRDRYKDRDKGSRKNRDEGHDRSKDGGKDDKLKLDGGDNRDRDVTKQ 262
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 28/147 (19%)
Query: 308 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRD---------KE 358
R + ++R RD+ERE++R R +DRDR +++++ +DR + ER+ +KDRD KE
Sbjct: 147 REEKRKNRDRDKEREKERXRAKDRDREKEKEKSKDR--EKERENDKDRDRDAIDKEKGKE 204
Query: 359 RDRDRTRERERDRD-YEVGDPDRDRGYSRDRDSDYDRI-----DSKHERDRHGERDYDPT 412
R RD+ RE ++DRD Y DRD+G ++RD +DR D K + D RD D T
Sbjct: 205 RIRDKEREADQDRDRY----KDRDKGSRKNRDEGHDRSKDGGKDDKLKLDGGDNRDRDVT 260
Query: 413 DQ-------EDDRGWYDHHENYEHHRG 432
Q EDD +H +N E G
Sbjct: 261 KQGRGSHHDEDDSRAIEHEKNAEGASG 287
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ T + RG+AF+ +
Sbjct: 8 PDVDG--MTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L V L+Y TT +KR FE YG + V + T + RG+AF+ + RD + A
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 200 DGRKLDGRRVLVDVER-GRTVPNWR 223
DG +DGR + V + R GR +R
Sbjct: 61 DGYMMDGRELRVQMARYGRPTDPYR 85
>gi|156096599|ref|XP_001614333.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148803207|gb|EDL44606.1| RNA binding protein, putative [Plasmodium vivax]
Length = 322
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 46/77 (59%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TL+V+ LS + T S+++ FE YG I++ ++++ T + R + F+ + + D A +
Sbjct: 91 TLYVSNLSSKITTSRLQDIFEEYGTIEKCYVISNPITRESRNFGFVTFNNPDDANNAMIK 150
Query: 199 ADGRKLDGRRVLVDVER 215
A+ ++GR + V++ +
Sbjct: 151 ANKMDIEGRIINVEIAK 167
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I+K LE+G A + Y + P+ ++V + +E E I YG I
Sbjct: 10 INKRELERGVSDKASWHQDY--------AHSPW--VYVGGMPFEMNEGDIIAVMSQYGEI 59
Query: 165 KRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
+ +V +KET K +G+ FI+Y R A G + GR + VD
Sbjct: 60 EDCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNLTGYNIMGRLLRVD 107
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P+V G +L V L+Y T+ ++R FE YG + V + D+ + + RG+AF+ +
Sbjct: 8 PDVEG--MTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG LDGR + V + R
Sbjct: 66 RDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|440800067|gb|ELR21110.1| peptidylprolyl cis-trans isomerase, cyclophilin-type domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 558
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T ++ F +G I ++ D++T+ GYAFIE+ + A
Sbjct: 241 PDNVLFVCKLNPVTESHDLELIFSRFGTILSCEVIRDQKTDDSLGYAFIEFETEAQCEQA 300
Query: 196 YKQADGRKLDGRRVLVDVERGRT 218
Y + D +D RRV VD + +
Sbjct: 301 YLKMDNVLIDDRRVHVDFSQSVS 323
>gi|154301711|ref|XP_001551267.1| hypothetical protein BC1G_10007 [Botryotinia fuckeliana B05.10]
gi|347828519|emb|CCD44216.1| hypothetical protein [Botryotinia fuckeliana]
Length = 459
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ DK T YAFIEY + + A
Sbjct: 246 PENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYEDEKSCEQA 305
Query: 196 YKQADGRKLDGRRVLVDVER--GRTVPNWR 223
Y + G +D R+ VD + + WR
Sbjct: 306 YFKMQGVLIDDHRIHVDFSQSVSKLSDTWR 335
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++I+ E++GP++ LV D+ET +GYAF Y A
Sbjct: 422 IFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYADLAVTDIACAAL 481
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 482 NGIKMGDKTLTV 493
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P + G +L V L+Y TT +KR FE YG + V + T + RG+AF+ +
Sbjct: 8 PTIDG--MTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD + A DG +DGR + V + R
Sbjct: 66 RDCEDAMDALDGYMMDGRELRVQMAR 91
>gi|367039335|ref|XP_003650048.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
gi|346997309|gb|AEO63712.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
Length = 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T E ++ F +G I ++ D++T YAFIE+ + + A
Sbjct: 251 PENVLFVCKLNPITNEEGLELIFSRFGKILSCEVIRDRKTGDSLQYAFIEFEDKKSCEEA 310
Query: 196 YKQADGRKLDGRRVLVDVER--GRTVPNWR----------PRRLGGGLGTTR 235
Y + D +D RR+ VD + R WR R GGG G +
Sbjct: 311 YSKMDQVLIDDRRIHVDFSQSVSRLSEVWRNETNAKRKKAAMRDGGGWGGVK 362
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 280 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRER--ERDRGRERDRDRTRDR 337
R ++R+RER K S +R R +D R + HR ++R R +ER +DR R +R ++++R
Sbjct: 409 RSKERQRERSKQRLGSRERQRSKDARRNERHRSKERQRSKERLKSKDRARSMERHKSKER 468
Query: 338 DRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDR----DRGYSRDRDSDYD 393
+ ++R R ER R K+R + ++R R++ER R ++ V +R +R S++R +
Sbjct: 469 QQSKERQRPKERQRSKERQRSKERQRSKERLRSKER-VRSKERLRSKERARSKERQRSKE 527
Query: 394 RIDSKHERDRHGER 407
R+ SK ER R ER
Sbjct: 528 RVRSK-ERLRSKER 540
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 243 QRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDR 302
+R+ +E++ S+ R E + ++R ++R+RS+ER R +ER R K S +R R +
Sbjct: 461 ERHKSKERQQSKERQRPKERQRSKERQRSKERQRSKERLRSKERVRSKERLRSKERARSK 520
Query: 303 D-HRDDRHHRDRDRTRDRERERDRGRERDRDRTR--DRDRGRDRGRDHERDRE------- 352
+ R R ++R R +ER R + R+R ++R R +R R +DR R ER R
Sbjct: 521 ERQRSKERVRSKERLRSKERARSKERQRSKERVRSKERQRSKDRPRSKERQRSTERERQR 580
Query: 353 ---------KDRDKERDRDRTRERERDRDYEVG 376
K+R + +DR R+RER R ++ ++
Sbjct: 581 SRERERQRSKERARSKDRHRSRERLRSKERQLS 613
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 348 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 407
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 408 NGIKMGDKTLTV 419
>gi|164424346|ref|XP_957404.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
gi|74619618|sp|Q871A4.1|PPIL4_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|28950237|emb|CAD71104.1| conserved hypothetical protein [Neurospora crassa]
gi|157070475|gb|EAA28168.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
Length = 494
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G I ++ D++T YAFIE+ + + A
Sbjct: 251 PENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEA 310
Query: 196 YKQADGRKLDGRRVLVDVERGRT 218
Y + D +D RR+ VD + +
Sbjct: 311 YSKMDSVLIDDRRIHVDFSQSVS 333
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ LSYE TE + F +G ++LV D+ET K +G+ +++Y R A
Sbjct: 35 VYFGGLSYELTEGDVVTIFSQFGEPVFLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR V VD
Sbjct: 95 GGAEIAGRLVRVD 107
>gi|390595888|gb|EIN05292.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 230
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P + LFV+ T + EFE YGP+ R + + + YAF+E+ TRD + A
Sbjct: 2 PPRILFVSGFHPNTRARDLAYEFERYGPLVRCDVPAPRNPHSNNPYAFVEFRSTRDAEDA 61
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWR 223
Y GR +G R+ + + WR
Sbjct: 62 YYDLHGRSFEGARLSIQWAKNPPSSVWR 89
>gi|357140041|ref|XP_003571581.1| PREDICTED: uncharacterized protein LOC100826556 [Brachypodium
distachyon]
Length = 350
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+++V L Y+ TE K++R F S G I V+++ D+ + + Y F+ Y H + + A +
Sbjct: 8 SVYVGGLPYDATEEKLRRYFGSCGEIIAVKVINDQRV-RGKCYGFVTYSHPKAAQRAINE 66
Query: 199 ADGRKLDGRRVLVD 212
DG+++ R V V+
Sbjct: 67 MDGQQIGNRAVKVN 80
>gi|308500055|ref|XP_003112213.1| CRE-SIG-7 protein [Caenorhabditis remanei]
gi|308268694|gb|EFP12647.1| CRE-SIG-7 protein [Caenorhabditis remanei]
Length = 452
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 112 KGAEKAAEELKKYDPHNDPNV---SGD--------PYKTLFVARLSYETTESKIKREFES 160
K AE+ AEEL++ + + GD P LFV +L+ TT+ ++ F
Sbjct: 218 KTAEEIAEELRQREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSR 277
Query: 161 YGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
+G I +V D+ + YAFIE+ + + + A+ + D +D RR+ VD + +
Sbjct: 278 FGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKMDNVLIDDRRIHVDFSQSVS 335
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 284 REREREKSLELSHDRPRDR--DHRDDRHHRDRDRTRDRER--ERDRGRERDRDRTRDRDR 339
RER + E S D P + ++R R DR R RD + ERDRGR RDR RD DR
Sbjct: 2158 RERFEGSTKEKSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRERDWDR 2217
Query: 340 GRD----RGRDHERDREKDRDKERDRDRTRERERDRDY 373
RD R +D RD +K++++ +RD+ RE ER++++
Sbjct: 2218 NRDWERHREKDSNRDWDKNKERNPNRDKDRESERNKEW 2255
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 214 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 273
+RG T + PR G E+ R+ + Q P +G + P + H +
Sbjct: 2053 QRGPTPLQFGPR----GSAPFSEKNEQPPSRFHFQGQSP-QGMKPAPRPLLELPSHPPQH 2107
Query: 274 R-ERSRERGRDREREREKSLEL--SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
R ER E G S S + D RD + H R++T + RER G ++
Sbjct: 2108 RKERWEEAGPSAPLPTNVSGPAPESDSQWTSSDFRDGKSHEYRNQTFEGRRERFEGSTKE 2167
Query: 331 R-------------------DRTRDRDRG----RDRGRDHERDREKDRDKERDRDRTRER 367
+ DR RDRD RDRGR+ RDRE+D D+ RD +R RE+
Sbjct: 2168 KSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRERDWDRNRDWERHREK 2227
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDR 394
+ +RD+ D +++R +RD+D + +R
Sbjct: 2228 DSNRDW---DKNKERNPNRDKDRESER 2251
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE TE + F YG ++LV DKET K +G+ +++Y R A
Sbjct: 57 VYFGGLPYELTEGDVITIFSQYGEPTFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 116
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 117 GGAEIAGRLIRVD 129
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 21/107 (19%)
Query: 264 IREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERER 323
I +++ DRD+ER E+ ++ER+R+K ++RDR RD+ER
Sbjct: 675 IEKEKERDRDKERHTEK--EKERDRDK-------------------EKERDRDRDKERHI 713
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
++ +ERDRD+ + ++ RDR +D ++EK+RDK +DRDR ++ R+
Sbjct: 714 EKEKERDRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRKQKMLRE 760
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 48/174 (27%)
Query: 253 SRGPS--RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD---- 306
S+GPS R +PR + D+H + R +E + S + +RP +
Sbjct: 590 SKGPSDDRRPDPRQKHDKHS---------KSRHKEEKNHNSHRMLENRPETPKNTSKTER 640
Query: 307 DRH--------------------------------HRDRDRTRDRERERDRGRERDRDRT 334
RH ++++R RD+ER ++ +ERDRD+
Sbjct: 641 SRHGEDKGRDRDRDKDRERHKDRDRARDRDKERNIEKEKERDRDKERHTEKEKERDRDKE 700
Query: 335 RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDR 388
++RDR RD+ R E+++E+DRDKE+ ++ R+R++DR E + +RD+ RDR
Sbjct: 701 KERDRDRDKERHIEKEKERDRDKEKHIEKERDRDKDRHIE-KEKERDKAKDRDR 753
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE +E I F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEIGGRLIRVD 107
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L +E +E I F YG ++L DKET K RG+A+I+Y R A
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + R + VD
Sbjct: 95 GGASIMDRIIRVD 107
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TES+I+ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 339 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 398
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 399 NGIKMGDKTLTV 410
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L +E +E I F YG ++L DKET K RG+A+I+Y R A
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + R + VD
Sbjct: 95 GGASIMDRIIRVD 107
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L++ RLS ETT+ + F YG I R D + R YAF+EY RD A K
Sbjct: 2 SLYIGRLSVETTQKNLNDHFSKYGTITR----NDVKKTNGRCYAFVEYKERRDADDALKA 57
Query: 199 ADGRKLDGRRVLVDVERG 216
+G L ++ V+ +G
Sbjct: 58 LNGTTLLNSKISVEWAKG 75
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L++ L+ ET + F YG I+R D + R +AFIE+ RD A K
Sbjct: 2 SLYIGGLTAETNARDLDNLFSVYGTIQR----NDIKKTSGRCFAFIEFKERRDADDALKA 57
Query: 199 ADGRKLDGRRVLVDVERG 216
+G KL G ++ V+ +G
Sbjct: 58 LNGAKLLGSKITVEWSKG 75
>gi|66801303|ref|XP_629577.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
gi|60462961|gb|EAL61158.1| hypothetical protein DDB_G0292710 [Dictyostelium discoideum AX4]
Length = 489
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T ++ F G +K +V DK TN YAF+EY + + A
Sbjct: 241 PDHVLFVCKLNPITEAEDLELVFSQCGTVKSCEVVRDKVTNDSLCYAFVEYSTKEECEKA 300
Query: 196 YKQADGRKLDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 247
Y + + +D RR+ VD + ++ N+ R GG R +N+ Y
Sbjct: 301 YLKLENILIDERRIHVDFCQSVAKVRNNQNSLKNFLTRGKGGSGRLDR--KHILNKNY-- 356
Query: 248 REQEPSRGPSRSAEPRIREDRHGDRDRERSRE-RGRDREREREKSLELSHDRPRDRDHRD 306
+++ ++G + + +DR+ + + ++ R RD + S S +R +DR+H D
Sbjct: 357 QQESGTKGYNYVDD----DDRNFKKQKSNEKDSRERDMKSSSSSSSSESDNRYKDRNHHD 412
Query: 307 DRHHRDRDR 315
++R DR
Sbjct: 413 RNYNRSYDR 421
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR-DRERERDRGRER 329
+RD+E+ R R EREKS S D+ R+++ R RD++RTR R+ ERDR RER
Sbjct: 29 ERDKEKKEHR-ESRRSEREKS---SDDKHREKERDKHRDKRDKERTRSSRDDERDRARER 84
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKE 358
+DR ++RDR + GRD ER++E++RDKE
Sbjct: 85 TKDREKERDRDHE-GRDAEREKERERDKE 112
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 22/103 (21%)
Query: 308 RHHRDRDRTRDRERERDRGRER----------------DRDRTRDRDRGRDRGRDHERDR 351
+ HRDRDR +R RER+R +E+ D+ R ++RD+ RD+ RD ER R
Sbjct: 13 KSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-RDKERTR 71
Query: 352 EKDRDKERDRDRT----RERERDRDYEVGDPDRDRGYSRDRDS 390
RD ERDR R RE+ERDRD+E D +R++ RD++S
Sbjct: 72 -SSRDDERDRARERTKDREKERDRDHEGRDAEREKERERDKES 113
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 8/103 (7%)
Query: 272 RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRD-RERERDRGRER 329
RDR+R+ ER R+RER++EK R DD+H ++RD+ RD R++ER R R
Sbjct: 16 RDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKERTRS-SR 74
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
D +R R R+R +DR ++ +RD E RD +R +ERERD++
Sbjct: 75 DDERDRARERTKDREKERDRDHEG-----RDAEREKERERDKE 112
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+F+ L YE +E I F YG + L DK+T K RG+ +++Y R A
Sbjct: 35 VFIGGLPYELSEGDIIAIFSQYGEPVHLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + GR + VD
Sbjct: 95 TGAVVLGRTIRVD 107
>gi|399216253|emb|CCF72941.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGD-PYKTLFVA 143
+P + E E ER AR + LE + PN P LFV
Sbjct: 31 NPEFVKEFEALERIKEREARSRAVTLEILGDL-------------PNADAKPPNNVLFVC 77
Query: 144 RLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 203
+L+ T +K F +G I +V D +T + YAFIE+ AY + +
Sbjct: 78 KLNSVTEAEDLKIIFSRFGTILSCNVVKDYKTGESLQYAFIEFEKEESCTDAYFKMENVL 137
Query: 204 LDGRRVLVDVERGRTVPN-WRPRRLGGG-------LGTTRVGGEEV 241
+D RR+ VD +++P W+ + G L + +GGE V
Sbjct: 138 IDDRRIHVDF--CQSIPTLWKKYKAGNITKGDYKELTHSTIGGERV 181
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 57/184 (30%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T +K F +G I +V D +T + YAFIE+ A
Sbjct: 70 PNNVLFVCKLNSVTEAEDLKIIFSRFGTILSCNVVKDYKTGESLQYAFIEFEKEESCTDA 129
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPN-WRPRRLGGG-------LGTTRVGGEEVNQRYSG 247
Y + + +D RR+ VD +++P W+ + G L + +GGE V
Sbjct: 130 YFKMENVLIDDRRIHVDF--CQSIPTLWKKYKAGNITKGDYKELTHSTIGGERV------ 181
Query: 248 REQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDD 307
I + H S P +R+H
Sbjct: 182 ----------------IGKSSH-------------------------SLSYPEEREHSPG 200
Query: 308 RHHR 311
H++
Sbjct: 201 LHNK 204
>gi|357141252|ref|XP_003572153.1| PREDICTED: scaffold attachment factor B1-like [Brachypodium
distachyon]
Length = 275
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
+P L+V LS TE+++++ F + G +K +V D T + RG+AF+ D +
Sbjct: 84 NPGNNLYVTGLSTRVTEAELEKFFSTEGKVKNCHVVLDPRTKESRGFAFVSMDTVEDARR 143
Query: 195 AYKQADGRKLDGRRVLVDVERGR 217
K+ L+GR LV VE+ +
Sbjct: 144 CIKRLHRTVLEGR--LVTVEKAK 164
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L ++ +E I F YG V L+ DKET K RG+AF++Y R A
Sbjct: 35 IYIGGLPFDLSEGDIITIFSQYGEPVHVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + GR + VD
Sbjct: 95 TGATVLGRVLRVD 107
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
++ V + T ++ +FE +G ++ V + D T + RG+ FIE+ RD A Q
Sbjct: 22 SVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 81
Query: 199 ADGRKLDGRRVLVDVER-GRTVP 220
D LDGR + V + + GR P
Sbjct: 82 TDRTMLDGREINVCLSKEGRKTP 104
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE +E I F +G ++LV DKET K +G+ +++Y + R A
Sbjct: 35 VYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYENQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEVGGRLLRVD 107
>gi|357441861|ref|XP_003591208.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355480256|gb|AES61459.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 936
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 311 RDRDRTRDRERERDRGRERD--RDRTRDRDRGRDRGRDHER-DREKDRDKERDRDRTRER 367
++R + + R+RERD+G+ER+ RDR RD RD+G+D R +RE DR+K+R RDR +
Sbjct: 131 KERGKEKTRDRERDKGKEREKHRDRESYRDGDRDKGKDKIREERESDREKDRSRDRGSRK 190
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHER-------DRHGERDYDPTDQE 415
+ DYE G+ D Y RD D KHE+ D+ GE + + +E
Sbjct: 191 AHEEDYESGNLDDRVDYHEKRDEDV----GKHEKASKLNQDDKEGETSANLSSKE 241
>gi|159461692|gb|ABW96885.1| Elipsa [Danio rerio]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 297 DRPRDRDHRDDRHHRDRDRTR-DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
D+P+D++ + D R RD R D+ RER+R ++RDRD+ + RDR +D+ R+ ER+REKDR
Sbjct: 179 DQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDR 238
Query: 356 DKERDRDRTRERERDRDYE 374
++E++R+R ++R++ ++ E
Sbjct: 239 NREKERERDKDRDKKKERE 257
>gi|41054766|ref|NP_956894.1| TRAF3-interacting protein 1 [Danio rerio]
gi|82187293|sp|Q6PGZ3.1|MIPT3_DANRE RecName: Full=TRAF3-interacting protein 1
gi|34783761|gb|AAH56776.1| TNF receptor-associated factor 3 interacting protein 1 [Danio
rerio]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 297 DRPRDRDHRDDRHHRDRDRTR-DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
D+P+D++ + D R RD R D+ RER+R ++RDRD+ + RDR +D+ R+ ER+REKDR
Sbjct: 179 DQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDR 238
Query: 356 DKERDRDRTRERERDRDYE 374
++E++R+R ++R++ ++ E
Sbjct: 239 NREKERERDKDRDKKKERE 257
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE +E + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 19 IYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 200 DGRKLDGRRVLVD 212
G ++ GR V VD
Sbjct: 79 GGAEIGGRLVRVD 91
>gi|210076262|ref|XP_504641.2| YALI0E31551p [Yarrowia lipolytica]
gi|199426981|emb|CAG80245.2| YALI0E31551p [Yarrowia lipolytica CLIB122]
Length = 763
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
LFV +L+ T ++ F +G I ++V D T Y FIEY D + AY +
Sbjct: 501 VLFVCKLNPVTEAEDLELIFSRFGEITGCQIVKDPVTGSSLQYGFIEYTTREDCERAYLK 560
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGG 230
+G +D R+ VD ++V + R+ GGG
Sbjct: 561 MEGVLIDDHRIHVDFS--QSVRKMQQRKQGGG 590
>gi|145497477|ref|XP_001434727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401855|emb|CAK67330.1| unnamed protein product [Paramecium tetraurelia]
Length = 686
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P L+V +L+ T E ++ F +G IK +V D +T YAFIE+ + A
Sbjct: 223 PENVLYVCKLNPITEEKDLEVIFSKFGLIKNCEVVRDWKTGSSLQYAFIEFETIAACEEA 282
Query: 196 YKQADGRKLDGRRVLVD 212
Y + + +D RR+ VD
Sbjct: 283 YMKMENVIIDERRIHVD 299
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L++ RLS +TTE + F YG I R D + + R YAFIEY +D A K
Sbjct: 2 SLYIGRLSTDTTERHLNDHFSKYGTITR----NDVKRSNGRCYAFIEYKEKKDADDALKA 57
Query: 199 ADGRKLDGRRVLVDVERG 216
+G L ++ V+ +G
Sbjct: 58 LNGTTLLNSKISVEWAKG 75
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
+L LS TT ++ E +GPI+ + L D T PRG F+E+ +D + A
Sbjct: 30 SLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHS 89
Query: 199 ADGRKLDGRRVLV 211
DG L GR + V
Sbjct: 90 LDGSTLAGRVISV 102
>gi|328876749|gb|EGG25112.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Dictyostelium fasciculatum]
Length = 495
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
ET + + I ++ EK A +E L+ NV P LFV +L+ +T ++
Sbjct: 199 ETKGKSKEEIDEMMDEKSARGRSELLEMLGVLPQANVK-PPENVLFVCKLNPDTESEDLE 257
Query: 156 REFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
F G +K ++ D + + Y FIEY + AYK+ + +D RR+ VD
Sbjct: 258 LAFSKCGVVKSCEIIKDPVSGESLCYGFIEYESKEQCENAYKKMENTFIDERRIHVDF-- 315
Query: 216 GRTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
+++ + G G GG+ VN
Sbjct: 316 CQSIAKIK-HMYGNGAANFLQGGKRVNS 342
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR---GR 327
D+D++RS ERG D++RE++K DR +DR R D+ +DR R RE ++DR +
Sbjct: 280 DKDKDRS-ERG-DKDREKDK------DRHKDRGERGDKSDGGKDRERARESDKDRERSAK 331
Query: 328 ERDRDRTRDRDRGRDR------GRDHERDREKDRDKERDRDRTRER 367
+ D+DR RD+DR +++ +D ER RE D++KE+DR+R +++
Sbjct: 332 DGDKDRERDKDRDKEKEKDGKDSKDRERTREGDKEKEKDRERRKDK 377
>gi|13539605|emb|CAC35733.1| cyclophilin-RNA interacting protein [Paramecium tetraurelia]
Length = 695
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P L+V +L+ T E ++ F +G IK +V D +T YAFIE+ + A
Sbjct: 223 PENVLYVCKLNPITEEKDLEVIFSKFGLIKNCEVVRDWKTGSSLQYAFIEFETIAACEEA 282
Query: 196 YKQADGRKLDGRRVLVD 212
Y + + +D RR+ VD
Sbjct: 283 YMKMENVIIDERRIHVD 299
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+FV L Y TE++++ ES+G ++ LV D+ET +GYAF Y A
Sbjct: 357 IFVGGLPYYFTEAQVRELLESFGSLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 416
Query: 200 DGRKLDGRRVLV 211
+G K+ + + V
Sbjct: 417 NGIKMGDKTLTV 428
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L +E +E I F YG ++L D+ET K RG+A+I+Y R A
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + R + VD
Sbjct: 95 GGANIMDRIIRVD 107
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L Y+ +E + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEIGGRLIRVD 107
>gi|302420239|ref|XP_003007950.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
gi|261353601|gb|EEY16029.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
Length = 497
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 17/158 (10%)
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
PPP K + + + H D L +EK +R AR L LE +
Sbjct: 188 ISPPPTKAQLATVRIADEAALH---EDDALGEDAIEKRRR--DREARAQALTLEMMGDLP 242
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
E+ P LFV +L+ TT+ ++ F +G I ++ DK+T
Sbjct: 243 FAEVAP------------PENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGD 290
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
YAFIEY +AAY + +D RR+ VD +
Sbjct: 291 SLQYAFIEYGDKASCEAAYFKMQDVLIDDRRIHVDFSQ 328
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L +E +E I F YG ++L D+ET K RG+A+I+Y R A
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + R + VD
Sbjct: 95 GGANIMDRIIRVD 107
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 41/73 (56%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
++++ L + TTE +++ F +G +K +++ ++ K +GYAF+E A ++
Sbjct: 138 AVYISSLDWWTTEQQLETFFAEFGKLKTLKIFENELNGKSKGYAFVELSSNEQALQAKEK 197
Query: 199 ADGRKLDGRRVLV 211
++++GR V +
Sbjct: 198 LSDKQINGREVTI 210
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L Y+ +E + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEIGGRLIRVD 107
>gi|403374574|gb|EJY87244.1| Peptidylprolyl isomerase (Cyclophilin)-like 4 [Oxytricha trifallax]
Length = 412
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 94 KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
K E +++ + H+ + + E+L D +P P LFV +L+ T +
Sbjct: 156 KTEDQIQQEIKEHQTKTRAAVLEIVEDLP--DADIEP-----PKNVLFVCKLNPVTQDGD 208
Query: 154 IKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 213
++ F +GPIK +V D +T YAFIE+ + AY + +G +D RR+ +D
Sbjct: 209 LRLIFSRFGPIKCCEIVRDWKTGDSLQYAFIEFENEESCIEAYSRMEGVAIDERRIHIDF 268
Query: 214 ERGRTVPNWRP-RRLGGGLGTTRVGGEE---------VNQRYSGREQEPSRG-PSRSAEP 262
+ W RR ++ +E V +S + + G +
Sbjct: 269 SQS-VAKEWNQYRRKMLKTAADQILEQEQARKEKERQVYNLFSNYKNKDREGRKDELSGS 327
Query: 263 RIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR 317
R R+ R D+D +R +E R ++R+R +S + +D+ R+RD ++DR R+R
Sbjct: 328 RSRDHRRNDKDYDRKKENDRGKDRDRRRSRDRDYDKHRERDRAG---YKDRKRSR 379
>gi|348577695|ref|XP_003474619.1| PREDICTED: TRAF3-interacting protein 1-like [Cavia porcellus]
Length = 634
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 23/137 (16%)
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-----HRDDRHHRD 312
R++E + R ++ +E ++E + RERER+K DR R RD HR+ R
Sbjct: 169 RNSEVKERSTSRDEKQKEDAKEESKPRERERDKEKMKESDRARHRDPGRDKHREGERERA 228
Query: 313 RDRTR-DRERERDRG-----------------RERDRDRTRDRDRGRDRGRDHERDREKD 354
++R + +RER+RDRG RERDRDR ++DR R R R+H R R++D
Sbjct: 229 KNRAKPERERDRDRGNKDRDREAERERRSEGGRERDRDRGGEQDRDRARDREHHRARDRD 288
Query: 355 RDKERDRDRTRERERDR 371
+D +R + RE+DR
Sbjct: 289 GPLPKDPEREKSREQDR 305
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 52/300 (17%)
Query: 154 IKREFESYGPIKRVRLVTDKETNKP-------------RGYAFIEYMHT-RDMKAAYKQA 199
++R E+ G + R +T+K +KP R F++ ++T +MK+ +
Sbjct: 6 VRRTQEALGRVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKSDNVKD 65
Query: 200 DGRKLDGRRVLVDV-----------ERGRTVPNWRPRR------LGGGLGTTRVGGEEVN 242
K+ + +DV + R V P R + G ++ ++
Sbjct: 66 KDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQMIGKCCLNKLSSDDAV 125
Query: 243 QRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDR 302
+R E+ +RG + +R + + D + ++E G +E+E E + ++R
Sbjct: 126 KRVLAGEKGDARGQA------VRTSKSHELDNKHAKEEGSKSRKEKE---EKRNSEVKER 176
Query: 303 D-HRDDRHHRD-RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK--- 357
RD++ D ++ ++ RERERD+ + ++ DR R RD GRD+ R+ ER+R K+R K
Sbjct: 177 STSRDEKQKEDAKEESKPRERERDKEKMKESDRARHRDPGRDKHREGERERAKNRAKPER 236
Query: 358 ERDRDRTRERERDRDYEVGDP------DRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP 411
ERDRDR + DRDRG +DRD DR + RDR G DP
Sbjct: 237 ERDRDRGNKDRDREAERERRSEGGRERDRDRGGEQDRDRARDR-EHHRARDRDGPLPKDP 295
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L Y+ +E + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEIGGRLIRVD 107
>gi|93140633|sp|P0C196.1|PPIL4_USTMA RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 551
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAE-------KAAEELKKYDPHNDPNV 132
FA+P AP + TP + RA LRL + + EE+++ N +
Sbjct: 190 FADPDG-FCAPSRSPSPTPCQVRA----LRLADDEDVHSDVDPASKEEMRRNADTNAAAL 244
Query: 133 S----GD--------PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG 180
+ GD P LFV +L+ T ++ F +G I ++ DK+T
Sbjct: 245 TLEMVGDLPFAEIRPPENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQ 304
Query: 181 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER--GRTVPNWRPRRLGG 229
YAFIE+ D + AY + +D RR+ VD + R +W +R G
Sbjct: 305 YAFIEFDKKDDAERAYFKMQNVLVDDRRIWVDFSQSVSRLHGDWVKKRNAG 355
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L Y+ TE I F +G ++L DKET K +G+ +++Y R A
Sbjct: 19 IYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 78
Query: 200 DGRKLDGRRVLVD 212
G + GR + VD
Sbjct: 79 GGADISGRMISVD 91
>gi|407925279|gb|EKG18294.1| hypothetical protein MPH_04489 [Macrophomina phaseolina MS6]
Length = 360
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + ++ F +G I ++ DK+T YAFIE+ + + A
Sbjct: 147 PENVLFVCKLNPVTQDEDLELIFSRFGTILSCEIIRDKQTGDSLQYAFIEFEDKKSCEQA 206
Query: 196 YKQADGRKLDGRRVLVDVERGRT-VPN-W-------RPRRLGGGLG 232
Y + +D R+ VD + + + N W R R GGG G
Sbjct: 207 YFKMQDVLIDDHRIHVDFSQSVSKLSNVWRDATNDKRKRAHGGGFG 252
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++V L + TE + F +G + L+ DKET K +G+ F++Y R A
Sbjct: 35 IYVGGLHSDLTEGDVVTIFSQFGNPTHLNLIRDKETGKSKGFGFLKYEDQRSCDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEVLGRLLRVD 107
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L Y+ +E + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 GGAEIGGRLIRVD 107
>gi|310796009|gb|EFQ31470.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 501
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 58 YKPPPEKRK---CPPLTGMAQFVSHFAEPG-----DPLYAPPVEKAETPVERRARIHKLR 109
Y PPE R+ PP T A+ D L +EK +R AR L
Sbjct: 177 YPDPPELREPSGSPPPTKAQLDTVRIADEAALHEDDDLDEEAIEKRRR--DREARAQALT 234
Query: 110 LEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRL 169
LE + E+ P LFV +L+ TT++ ++ F +G I +
Sbjct: 235 LEMMGDLPFAEV------------APPENVLFVCKLNPVTTDADLELIFGRFGKILSCEV 282
Query: 170 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
+ D +T YAFIEY +AAY + +D RR+ VD + +
Sbjct: 283 IRDAKTGDSLQYAFIEYADKASCEAAYAKMQDVLIDDRRIHVDFSQSVS 331
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHT 189
P++ G +L + LSY T ++R F +G I V + DK + RG+AF+ +
Sbjct: 7 PDIGGM--TSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDK 63
Query: 190 RDMKAAYKQADGRKLDGRRVLVDVER 215
RD A G+ LDGR + VD R
Sbjct: 64 RDAGDAIDDLAGKDLDGREIRVDYAR 89
>gi|195330360|ref|XP_002031872.1| GM23818 [Drosophila sechellia]
gi|194120815|gb|EDW42858.1| GM23818 [Drosophila sechellia]
Length = 899
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
Query: 326 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
GR +D+++ RDRDR D+ ++ +RDREK ++K+RDRD+++E++RDR
Sbjct: 178 GRVKDKEKERDRDR--DKSKEKDRDREKSKEKDRDRDKSKEKDRDR 221
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
A L P N P D ++V L +E ++K +YG +K LV D T
Sbjct: 362 ASLLPSIVPTNVP----DSENKIYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGV 417
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
+G+AF EY + A + +G L + ++V
Sbjct: 418 SKGFAFCEYQDSEVTDVACSKLNGIPLADKTLVV 451
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKK-YDPHNDPNVSGDPYK 138
A G PL PV + E+ L + A L P+ SG K
Sbjct: 284 IALSGQPLLGQPVMVKPSEAEKN-------LVQSTTSVANGLTGLIGPY-----SGGARK 331
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
L+V L TE+ I+R FE++G ++ V+L D E+ +G+ F+++ D + A
Sbjct: 332 -LYVGNLHISITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQSL 389
Query: 199 ADGRKLDGRRVLV 211
++ GR + V
Sbjct: 390 NGQLEIGGRTIKV 402
>gi|269316056|ref|XP_640578.4| SWAP/Surp domain-containing protein [Dictyostelium discoideum AX4]
gi|256012945|gb|EAL66605.2| SWAP/Surp domain-containing protein [Dictyostelium discoideum AX4]
Length = 951
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDK-ETNKPRGY---AFIEYMHTRDMKAA 195
LF+ LS E+ E I F +YG I ++++T K E ++ RG A + Y RD A
Sbjct: 384 LFLGTLSVESNEQVIDELFSTYGIINSIKIITPKNEDDRKRGINYCAIVTYQFPRDAHNA 443
Query: 196 YKQADGRKLDGRRV 209
K G+KL GR +
Sbjct: 444 MKDLTGKKLLGREL 457
>gi|115908563|ref|XP_787384.2| PREDICTED: uncharacterized protein LOC582336 [Strongylocentrotus
purpuratus]
Length = 702
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT ++ F +G I ++ DK T Y+FIE+ D + A
Sbjct: 380 PENVLFVCKLNPLTTSEDLEIIFSRFGKISSCEVIKDKVTGDSLSYSFIEFEREEDCEEA 439
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + D +D RR+ VD + N P G + GGE G + S+
Sbjct: 440 YFKMDNVLIDDRRIHVDFSQSVAKLNMGP----SGPIIPQTGGESSKYAIKGTKSRQSQ- 494
Query: 256 PSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH 309
++G E RG+ R ++++ +P + D DDRH
Sbjct: 495 ------------KYGLVLDEGDNSRGQQRSQQKKP-----RRQPSESDSDDDRH 531
>gi|328873267|gb|EGG21634.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
fasciculatum]
Length = 433
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 62/119 (52%), Gaps = 19/119 (15%)
Query: 300 RDRDHRDDRHHRDRDRTRDR------ERERDRGRERDRDRTRDRDRGRDRGRDHERDREK 353
RDR R DR DRD R +RERDRG +RDR+R DRG DRG D ERDR
Sbjct: 321 RDRGERSDRGGGDRDYRSSRSDRSTGDRERDRGSDRDRER----DRGSDRG-DRERDRGS 375
Query: 354 DRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPT 412
+R DRDR R R G DR+R Y+ + S DR + ERD HG D + T
Sbjct: 376 ERSSGSDRDRERHRS-------GGSDRERDYNNNNGSSNDR-HRERERDHHGGEDRNGT 426
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 270 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 329
GDRD SR +RER++ DR R+RD DR R+RDR +R DR RER
Sbjct: 332 GDRDYRSSRSDRSTGDRERDRG----SDRDRERDRGSDRGDRERDRGSERSSGSDRDRER 387
Query: 330 DR----DRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
R DR RD + D R+RE+D DR+ TRERERD
Sbjct: 388 HRSGGSDRERDYNNNNGSSNDRHRERERDHHGGEDRNGTRERERD 432
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE +E I F +G ++L DKET K +G+ +++Y R A
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G ++ GR + VD
Sbjct: 95 SGAEIGGRLIRVD 107
>gi|346977630|gb|EGY21082.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium dahliae
VdLs.17]
Length = 509
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 17/156 (10%)
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PPP K + + + H D L +EK +R AR L LE +
Sbjct: 190 PPPTKAQLATVRIADEAALH---EDDALGEDAIEKRRR--DREARAQALTLEMMGDLPFA 244
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
E+ P LFV +L+ TT+ ++ F +G I ++ DK+T
Sbjct: 245 EVAP------------PENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGDSL 292
Query: 180 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 215
YAFIEY +AAY + +D RR+ VD +
Sbjct: 293 QYAFIEYDDKSSCEAAYFKMQDVLIDDRRIHVDFSQ 328
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L + TE ++++ FE +G ++ V+L D ET + +G+ F+++ KAA
Sbjct: 275 LYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQNLN 334
Query: 200 DGRKLDGRRVLVD 212
+ GR + V
Sbjct: 335 GKLDIAGRIIKVS 347
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 116 KAAEELKKYDPHNDPNVSGDPY------KTLFVARLSYETTESKIKREFESYGPIKRVRL 169
+A +EL + + N G + ++ L Y+ TE I F +G ++L
Sbjct: 5 RAIQELNRREIENGITPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKL 64
Query: 170 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
DKET K +G+ +++Y R A G + GR + VD
Sbjct: 65 ARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADIGGRMISVD 107
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P +L+V + T +IK F YG ++ V + D T +PRG+A+IE+ D + A
Sbjct: 54 PNTSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYA 113
Query: 196 YKQADGRKLDGRRVLVDVERG--RTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
K+ + +L + + VD +G +T + ++ + R+ EEV Q
Sbjct: 114 QKKLNRTRLGDKMLHVDFAQGDRKTPGQMKTQKEATAI---RLQIEEVKQ 160
>gi|402889833|ref|XP_003908205.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Papio anubis]
Length = 691
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 237 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 296
G E+ +R + R+Q+ ++PR D+D+ +++E G +R RE E+ +
Sbjct: 169 GDSEIKERSTSRDQKQKEELKEDSKPR-----EKDKDKGKAKENGGNRHREGERERPKAR 223
Query: 297 DRPRDRDHRDDRHHRDRDRTRDRERERDR----GRERDRDRTRDRDRGRDRGRDHERDRE 352
RP D + + DR +R+RDR +RE+E DR G+E++R R RDR+R RD+G+D +R R
Sbjct: 224 ARP-DSERQKDRGNRERDRDSEREKETDRKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
Query: 353 KDRDKERDRDRTRERERDR 371
K+ + RD DR + RE D+
Sbjct: 283 KNGEHSRDLDREKNREHDK 301
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 131 NVSGDPYKT----LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEY 186
N PY L+V L + TE ++++ FE +G ++ V+L D ET +G+ F+++
Sbjct: 315 NAGSGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLD-ETGHCKGFGFVQF 373
Query: 187 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 218
D K A ++ GR + V +T
Sbjct: 374 ARLEDAKNALNLNGQVEIAGRPIKVSTVTDQT 405
>gi|342883559|gb|EGU84022.1| hypothetical protein FOXB_05442 [Fusarium oxysporum Fo5176]
Length = 318
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE +E + F +G ++L DKET K +G+ +++Y R A
Sbjct: 35 VYFGGLPYELSEGDVITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVD 212
G + GR + VD
Sbjct: 95 GGADIGGRLISVD 107
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P +L+V + T +IK F YG ++ V + D T +PRG+A+IE+ D + A
Sbjct: 54 PNTSLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYA 113
Query: 196 YKQADGRKLDGRRVLVDVERG--RTVPNWRPRRLGGGLGTTRVGGEEVNQ 243
K+ + +L + + VD +G +T + ++ + R+ EEV Q
Sbjct: 114 QKKLNRTRLGDKMLHVDFAQGDRKTPGQMKTQKEATAI---RLQIEEVKQ 160
>gi|402889831|ref|XP_003908204.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Papio anubis]
Length = 625
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 237 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 296
G E+ +R + R+Q+ ++PR D+D+ +++E G +R RE E+ +
Sbjct: 169 GDSEIKERSTSRDQKQKEELKEDSKPR-----EKDKDKGKAKENGGNRHREGERERPKAR 223
Query: 297 DRPRDRDHRDDRHHRDRDRTRDRERERDR----GRERDRDRTRDRDRGRDRGRDHERDRE 352
RP D + + DR +R+RDR +RE+E DR G+E++R R RDR+R RD+G+D +R R
Sbjct: 224 ARP-DSERQKDRGNRERDRDSEREKETDRKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
Query: 353 KDRDKERDRDRTRERERDR 371
K+ + RD DR + RE D+
Sbjct: 283 KNGEHSRDLDREKNREHDK 301
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 311 RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD--RDRTRERE 368
RDRD ++ ER+R R R+++R +R+R +R R+ + +RE D++KER+ +D+ RE E
Sbjct: 2410 RDRDHSKPWERDRSRNWSREKERDWERNRDWERHREKDTNREWDKNKERNPNKDKERESE 2469
Query: 369 RDRDY 373
R++D+
Sbjct: 2470 RNKDW 2474
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 29/118 (24%)
Query: 303 DHRDDRHH---------RDRDR--------------TRDRERERDRGRE---RDRDRTR- 335
D RD ++H R RDR T+ E + RG E RDRD ++
Sbjct: 2358 DFRDGKNHEFRNQNFEARPRDRFEGGSKEKPLDEPETQASENRQSRGFEERRRDRDHSKP 2417
Query: 336 -DRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDY 392
+RDR R+ R+ ERD E++RD ER R++ RE D++ E +P++D+ +R+ D+
Sbjct: 2418 WERDRSRNWSREKERDWERNRDWERHREKDTNREWDKNKE-RNPNKDKERESERNKDW 2474
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
T+FV++LS + TE+ + F G + +V LV DK T + +G ++E+ R+M
Sbjct: 219 TVFVSKLSPKITENDLYEFFAQAGKVLKVSLVIDKITKRLKGVGYVEFSE-REMVEKAVL 277
Query: 199 ADGRKLDGRRVLV 211
G+K+ + +LV
Sbjct: 278 LTGQKVLNQSILV 290
>gi|194747085|ref|XP_001955983.1| GF24975 [Drosophila ananassae]
gi|190623265|gb|EDV38789.1| GF24975 [Drosophila ananassae]
Length = 1051
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 37/151 (24%)
Query: 258 RSAEPRIREDRHGDRDRERSRERGRDREREREK----SLEL------------------S 295
RS E + +DRH ++R+RS++R R RE+ R K S+E S
Sbjct: 415 RSKERQRSKDRHRSKERQRSKDRQRSREKHRSKDKKQSVEKKRDRSKDRRRSKEREQKRS 474
Query: 296 HDRPRDRDHRDDRHHRDRDRTRDRERERDRG---------------RERDRDRTRDRDRG 340
+ +R R +D DR + E+ERDR RERDR R+ +++RG
Sbjct: 475 VGKEPERSSRRRSIEKDGDRKKSVEKERDRKGSVEKERRERKKSPERERDRKRSVEKERG 534
Query: 341 RDRGRDHERDREKDRDKERDRDRTRERERDR 371
R R + ERDR++ +KERDR R+ E+ERDR
Sbjct: 535 RKRSPEKERDRKRSPEKERDRKRSAEKERDR 565
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 277 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 336
SR R +++ +R+KS+E + RDR ++ R+R ++ +RER+R R E++R R R
Sbjct: 483 SRRRSIEKDGDRKKSVE----KERDRKGSVEKERRERKKSPERERDRKRSVEKERGRKRS 538
Query: 337 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
++ RDR R E++R++ R E++RDR R E++R+
Sbjct: 539 PEKERDRKRSPEKERDRKRSAEKERDRKRSAEKERE 574
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 299 PRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 355
PR R H +DR R+++R+R ++R R +DR R+++R R +DR R E+ R KD+
Sbjct: 393 PRKEPERGREHSKDRHRSKERQRSKERQRSKDRHRSKERQRSKDRQRSREKHRSKDK 449
>gi|326430244|gb|EGD75814.1| hypothetical protein PTSG_07932 [Salpingoeca sp. ATCC 50818]
Length = 459
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK 177
A+ L+ D ++ P LFV +L+ TT+ ++ F +G I ++ D +T +
Sbjct: 202 AQVLEMVGDLPDADIKA-PENVLFVCKLNPVTTDDDLRLIFSRFGKILSCEIIRDWKTQE 260
Query: 178 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
YAFIE+ + AY + + +D RR+ VD
Sbjct: 261 SLQYAFIEFEDKAACEEAYLKMENVLIDDRRIHVD 295
>gi|242080117|ref|XP_002444827.1| hypothetical protein SORBIDRAFT_07g028800 [Sorghum bicolor]
gi|241941177|gb|EES14322.1| hypothetical protein SORBIDRAFT_07g028800 [Sorghum bicolor]
Length = 519
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPR 179
TLFV L + TT++ ++ E YGP+K VR +K + PR
Sbjct: 181 TLFVGELHWWTTDADLESELSKYGPVKEVRFFDEKASASPR 221
>gi|109101625|ref|XP_001087072.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Macaca mulatta]
Length = 691
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 325
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 195 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 253
Query: 326 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 254 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 301
>gi|355565320|gb|EHH21809.1| hypothetical protein EGK_04953, partial [Macaca mulatta]
gi|355750964|gb|EHH55291.1| hypothetical protein EGM_04462, partial [Macaca fascicularis]
Length = 653
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 325
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 157 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 215
Query: 326 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 216 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 263
>gi|340939406|gb|EGS20028.1| pre-mRNA splicing factor (srp1)-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 214
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P TL+V S+ T + EFE YG + R + + N R +AF+EY RD A
Sbjct: 4 PGTTLYVTGFSHGTRARDLAYEFERYGRLVRCDIPAPRSANS-RLFAFVEYEDRRDADDA 62
Query: 196 YKQADGRKLDGRRVLVDVERGRTVP--NWR 223
Y + ++ GR ++ +E RT P +WR
Sbjct: 63 YHEMHNKRF-GRDDILKIEWARTPPSASWR 91
>gi|346977782|gb|EGY21234.1| RNA-binding motif protein [Verticillium dahliae VdLs.17]
Length = 333
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 116 KAAEELKKYDPHN--DPNVSG--DPYKTLFV--ARLSYETTESKIKREFESYGPIKRVRL 169
KA + L K + N P S D T F+ L YE +E + F +G ++L
Sbjct: 5 KAIQALNKQEIENGISPEASWHVDYRDTAFIYFGGLPYEMSEGDVITIFSQFGEPVWLKL 64
Query: 170 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
DKET K +G+ +++Y R A G + R V VD
Sbjct: 65 ARDKETGKAKGFGWLKYEDQRSTDLAVDNLGGATIGSRMVRVD 107
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L TE ++++ FE +G ++ V+L D T +G+ F+++ D KAA
Sbjct: 279 LYVGNLHANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQSLN 338
Query: 200 DGRKLDGRRVLVD 212
+ GR + V
Sbjct: 339 GQLDIAGRVIKVS 351
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 198
TL+V +S TTE IK EF YG + R + K F+EY RD + AY+
Sbjct: 6 TLYVGNISSRTTERDIKDEFGRYGRVIRCYIPPGK------NICFVEYDDERDAEDAYRG 59
Query: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 229
++DG ++++ + P R RR G
Sbjct: 60 MASARVDGN--TLNLQWAKAGPRDRSRRYYG 88
>gi|395325069|gb|EJF57498.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 203
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETN-KPRGYAFIEYMHTRDMKAAY 196
+ LFV+ T + EFE YGP+ R + + + YAF+E+ RD + AY
Sbjct: 3 RILFVSGFHPTTRARDLAYEFERYGPLVRCDVPAPRNPHANSNPYAFVEFRSQRDAEDAY 62
Query: 197 KQADGRKLDGRRVLVDVERGRTVPNW 222
GR +G R+ + + W
Sbjct: 63 YDMHGRYFEGSRLSIQWAKNPPSSVW 88
>gi|297265216|ref|XP_002799147.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Macaca mulatta]
gi|383417409|gb|AFH31918.1| TRAF3-interacting protein 1 isoform 2 [Macaca mulatta]
Length = 625
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 268 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 325
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 195 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 253
Query: 326 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 254 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 301
>gi|222640483|gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japonica Group]
Length = 271
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKA 194
+P L+V LS TE +++ F G ++ +V D T + RG+AF+ D +
Sbjct: 80 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARR 139
Query: 195 AYKQADGRKLDGRRVLVDVERGR 217
K L+GR LV VE+ +
Sbjct: 140 CIKYLHRTVLEGR--LVTVEKAK 160
>gi|389746838|gb|EIM88017.1| cyclophilin-like protein [Stereum hirsutum FP-91666 SS1]
Length = 466
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
AE DPL+ + + E +RR K A+ +A L+ NV P
Sbjct: 203 IAEDEDPLFE--LPEEEAEEQRRL--------KAAQASALTLEMVGDLPFANVR-PPENV 251
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
LFV +L+ T + ++ F +G I +++ DK+T YAFIE+ D + AY +
Sbjct: 252 LFVCKLNPVTRDEDLELIFSRFGVIMSCQVIRDKKTGDSLQYAFIEFDKREDAEQAYFKM 311
Query: 200 DGRKLDGRRVLVDVER 215
+D RR+ VD +
Sbjct: 312 QNVLVDDRRIWVDFSQ 327
>gi|195037156|ref|XP_001990030.1| GH18460 [Drosophila grimshawi]
gi|193894226|gb|EDV93092.1| GH18460 [Drosophila grimshawi]
Length = 582
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ TT+ ++ F +G +K ++ D++T YAF+E+ + +AA
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE--VNQRYSGREQEPS 253
Y + D +D RR+ VD + WR G G G G+ N R +G
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVARVTWR----GKGRGVIGADGKLDFNNLRDNGANNNGR 353
Query: 254 RGPSRSAEPRIREDRHGDRD-RERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD 312
+ SR+ + R G RD R+ +R R ER ++ EL H R+ R H+R
Sbjct: 354 KNESRTNK---RGRNEGRRDVRKPEEQRSRMGSAERRRARELRHQEQEGREDRSRNHNRQ 410
Query: 313 RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 371
R ++R+ +R R R+RDR+ R + +R ++ R DR RDR
Sbjct: 411 RSKSREPTERHRERSDRRRSRSRDRNERRRATSPYRGNRYSP-ERRRQEDRHNRSSRDR 468
>gi|449544152|gb|EMD35126.1| hypothetical protein CERSUDRAFT_116600 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNK-PRGYAFIEYMHTRDMKAAY 196
+ LFV+ T + EFE YGP+ R + + + YAF+E+ RD + AY
Sbjct: 3 RILFVSGFHSATRARDLAYEFERYGPLVRCDVPAPRNPHANSNPYAFVEFRSQRDAEDAY 62
Query: 197 KQADGRKLDGRRVLVDVERGRTVPNWR 223
GR +G R+ + + WR
Sbjct: 63 YDMHGRTFEGARLSIQWAKNPPSSVWR 89
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 113 GAEKAAEELKKYDPHNDPNVSGDPY-KTLFVARLSYETTESKIKREFESYGPIKRVRLVT 171
G A+ L P V+G + L+V L TE ++ +S+G ++ LV
Sbjct: 316 GPTTPADSLNLAAVGLIPGVNGQSSGRKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVV 375
Query: 172 DKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVL 210
DK+T +GY F EY +AA + G +L G +VL
Sbjct: 376 DKDTGTLKGYGFFEYADAAADEAAMEGLTGMRL-GDKVL 413
>gi|432097240|gb|ELK27580.1| Neurofilament heavy polypeptide, partial [Myotis davidii]
Length = 617
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 29 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 88
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 89 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 145
Query: 390 SDYDRIDSKHERDRHGERDY 409
S DR DS +RD +RD
Sbjct: 146 SPQDR-DSPQDRDSPQDRDS 164
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 65 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 124
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 125 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 181
Query: 390 SDYDRIDSKHERDRHGERDY 409
S DR DS +RD +RD
Sbjct: 182 SPQDR-DSPQDRDSPQDRDS 200
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 167 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 226
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 227 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 283
Query: 390 SDYDRIDSKHERDRHGERDY 409
S DR DS +RD +RD
Sbjct: 284 SPQDR-DSPQDRDSPQDRDS 302
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 269 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 328
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 329 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 385
Query: 390 SDYDRIDSKHERDRHGERDY 409
S DR DS +RD +RD
Sbjct: 386 SPQDR-DSPQDRDSPQDRDS 404
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 371 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 430
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 431 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 487
Query: 390 SDYDRIDSKHERDRHGERDY 409
S DR DS +RD +RD
Sbjct: 488 SPQDR-DSPQDRDSPQDRDS 506
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDR 325
D DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR
Sbjct: 1 DSSQDRDSAQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDR 60
Query: 326 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYS 385
+DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR
Sbjct: 61 DSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSP 117
Query: 386 RDRDSDYDRIDSKHERDRHGERDY 409
+DRDS DR DS +RD +RD
Sbjct: 118 QDRDSPQDR-DSPQDRDSPQDRDS 140
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 266 EDRHGDRDRERSRERG--RDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERE 322
+DR +DR+ ++R +DR+ +++ D P+DRD DR +DRD +DR+
Sbjct: 4 QDRDSAQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP 63
Query: 323 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR 382
+DR +DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR
Sbjct: 64 QDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDR 120
Query: 383 GYSRDRDSDYDRIDSKHERDRHGERDY 409
+DRDS DR DS +RD +RD
Sbjct: 121 DSPQDRDSPQDR-DSPQDRDSPQDRDS 146
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 329
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 425 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 484
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 389
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 485 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 541
Query: 390 SDYDR 394
S DR
Sbjct: 542 SPQDR 546
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 281 GRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRER-----ERDRGR------ER 329
GR RER + E + + P DH D+R +R D R E+DRGR ER
Sbjct: 2147 GRQRERYEGGNKEKTPEHP---DHSDNRSNRGTDDRRRDRDHTWAWEKDRGRNWNRGRER 2203
Query: 330 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 372
+ +R +++D ++R R + R+RE+D ++ +D +RTRER R+RD
Sbjct: 2204 EWERHKEKDWDKNRERGYNRERERDSERGKDWERTRERGRNRD 2246
>gi|168051001|ref|XP_001777945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670705|gb|EDQ57269.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2357
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 19/73 (26%)
Query: 319 RERERDRGRERDRDRTRDRD-RGRDRGRDHERDRE------------------KDRDKER 359
+E+ERD+GR+R +R ++R+ R RD R H+R RE KDR +
Sbjct: 1852 KEKERDKGRDRPFERAKERERRDRDPKRGHDRSRERVWDDQRDRERDRDYERDKDRSQAW 1911
Query: 360 DRDRTRERERDRD 372
DR + R+R R +D
Sbjct: 1912 DRSKERDRARLKD 1924
Score = 40.8 bits (94), Expect = 1.7, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 284 REREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDR 343
+E+ER+K + +R ++R+ RD R DR+R+R + R RERDRD RD+DR +
Sbjct: 1852 KEKERDKGRDRPFERAKERERRDRDPKRGHDRSRERVWDDQRDRERDRDYERDKDRSQAW 1911
Query: 344 GRDHERDREKDRDK 357
R ERDR + +DK
Sbjct: 1912 DRSKERDRARLKDK 1925
>gi|405117860|gb|AFR92635.1| peptidyl-prolyl cis-trans isomerase-like 4 [Cryptococcus neoformans
var. grubii H99]
Length = 493
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + ++ F +G I +V DK++ YAFIE+ + A
Sbjct: 224 PENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQA 283
Query: 196 YKQADGRKLDGRRVLVDVER 215
Y + +D RR+ VD +
Sbjct: 284 YFKMQNVLVDDRRIWVDFSQ 303
>gi|320545415|ref|NP_001097475.2| CG7971, isoform F [Drosophila melanogaster]
gi|318069094|gb|ABW08438.2| CG7971, isoform F [Drosophila melanogaster]
Length = 1655
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 273 DRERSRERGRDREREREKSLEL--SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
+R+RS+ER R +ER+R +S + ++P+ + ++ R R +++DR+R +++ R +D
Sbjct: 680 ERQRSKERQRSKERQRSRSKDALRCKEKPQC-NEKERSRERRRSKSKDRQRSKEKHRPKD 738
Query: 331 RDRTRD--RDRGRDRGRDHERDREKDRDKERDRDRTRERERD 370
++ D RDR DR ++++R E+ R KER R + RER +D
Sbjct: 739 EQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKD 780
>gi|390345979|ref|XP_789163.3| PREDICTED: uncharacterized protein LOC584197 [Strongylocentrotus
purpuratus]
Length = 1759
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 299 PRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKE 358
P++ + D +D R++DRER+ ++ +ER D +DR +DRG+D D E+ R++E
Sbjct: 1313 PKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDRGKDSTEDGEQGRERE 1372
Query: 359 RDRDRTRERERD 370
RDRD+ +++ +D
Sbjct: 1373 RDRDQEKDKGKD 1384
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 19/103 (18%)
Query: 280 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 339
R +DRER+ E+ E R DH DR + ++DR +D + ++GRER+RDR +++D+
Sbjct: 1329 RSKDRERKHEQHKE------RKSDHDKDRKN-EQDRGKDSTEDGEQGRERERDRDQEKDK 1381
Query: 340 GRDRGRD------------HERDREKDRDKERDRDRTRERERD 370
G+D D HE+DR ++RD RDR+R R RD
Sbjct: 1382 GKDATVDGEQDRERERDREHEKDRGRERDHGRDRERDLRRVRD 1424
>gi|302850201|ref|XP_002956628.1| hypothetical protein VOLCADRAFT_97651 [Volvox carteri f. nagariensis]
gi|300257989|gb|EFJ42230.1| hypothetical protein VOLCADRAFT_97651 [Volvox carteri f. nagariensis]
Length = 2827
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 26/93 (27%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 330
DRD+ER R+RGRDR+++RE+ D++R + + RE E++
Sbjct: 1794 DRDKERERQRGRDRDKDREEP-------------------EDKERGKGKSRE-----EKE 1829
Query: 331 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDR 363
+ R DRGRD R +EKDR+KERDR++
Sbjct: 1830 QPRILKLGLKEDRGRD--RAQEKDREKERDREK 1860
>gi|134106915|ref|XP_777770.1| hypothetical protein CNBA4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260468|gb|EAL23123.1| hypothetical protein CNBA4680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 501
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + ++ F +G I +V DK++ YAFIE+ + A
Sbjct: 241 PENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQA 300
Query: 196 YKQADGRKLDGRRVLVDVER 215
Y + +D RR+ VD +
Sbjct: 301 YFKMQNVLVDDRRIWVDFSQ 320
>gi|58259029|ref|XP_566927.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819223|sp|P0CP89.1|PPIL4_CRYNB RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|338819224|sp|P0CP88.1|PPIL4_CRYNJ RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|57223064|gb|AAW41108.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 504
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + ++ F +G I +V DK++ YAFIE+ + A
Sbjct: 244 PENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDEREAAEQA 303
Query: 196 YKQADGRKLDGRRVLVDVER 215
Y + +D RR+ VD +
Sbjct: 304 YFKMQNVLVDDRRIWVDFSQ 323
>gi|195336666|ref|XP_002034956.1| GM14188 [Drosophila sechellia]
gi|194128049|gb|EDW50092.1| GM14188 [Drosophila sechellia]
Length = 725
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 266 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR 325
++R RDR+RS+ER R +ER+R + S +R R +++R R + R R R +D
Sbjct: 429 KERQQSRDRQRSKERQRSKERQRSIEKQRSKERQRSKENR-------RSKERQRSRSKDV 481
Query: 326 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYS 385
R +++ ++ ++++ R+R R +DR++ +DK R +D + ++ RD G + R
Sbjct: 482 LRCKEKPQSNEKEQSRERRRSKSKDRQRSKDKHRPKDEKQSVDKRRDRSTGRKENQRSNV 541
Query: 386 RDRDSDYDR 394
R R ++ R
Sbjct: 542 RQRSNERQR 550
>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 763
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVT-------- 171
E+ + +PN LFV L+Y T+ I F GPI V L
Sbjct: 319 EIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDICELFGPVGPIVDVSLPQIDRAIPND 378
Query: 172 DKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
++ RG AFIE+ +D + A + GR L GR + V+
Sbjct: 379 SEDAFAVRGIAFIEFADRKDARTAL-ELSGRHLCGRPITVN 418
>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211966492|gb|EEB01688.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 754
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVT-------- 171
E+ + +PN LFV L+Y T+ I F GPI V L
Sbjct: 319 EIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDICELFGPVGPIVDVSLPQIDRAIPND 378
Query: 172 DKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 212
++ RG AFIE+ +D + A + GR L GR + V+
Sbjct: 379 SEDAFAVRGIAFIEFADRKDARTAL-ELSGRHLCGRPITVN 418
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 305 RDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRT 364
RD H R +R R R RDR ER R++ D++R R + +D ++D E+ +D ER RDR
Sbjct: 2167 RDREHGRPWERDRGRNWNRDRDWERHREKEWDKNRDRSQNKDRDKDSERGKDWERSRDRD 2226
Query: 365 RER 367
R R
Sbjct: 2227 RTR 2229
>gi|332026097|gb|EGI66245.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Acromyrmex echinatior]
Length = 504
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 29/159 (18%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T + ++ F +G I ++ D +T YAFIE+ + + A
Sbjct: 238 PENVLFVCKLNPVTNDDDLEIIFSRFGKIVGCEVIRDHQTGDSLQYAFIEFADRKSCEDA 297
Query: 196 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 255
Y + D +D RR+ VD + WR G G G RY + +P +
Sbjct: 298 YFKMDNVLIDDRRIHVDFSQSVAKMRWR----GKGKGI----------RYFDEDDKPKKR 343
Query: 256 PSRSAEPRIREDRHG---------------DRDRERSRE 279
+ R + H + D++R E
Sbjct: 344 EDNYSSSRKLDASHNRDHDNGKSKEEGKRKESDKDRGSE 382
>gi|426193551|gb|EKV43484.1| hypothetical protein AGABI2DRAFT_195104 [Agaricus bisporus var.
bisporus H97]
Length = 210
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG----YAFIEYMHTRDMK 193
+ LFV+ +T + EFE +GP+ R + + PR YAF+E+ RD +
Sbjct: 3 RILFVSGFHPQTRARDLAYEFERFGPLIRCDVPAPR---NPRASSNPYAFVEFRSGRDAE 59
Query: 194 AAYKQADGRKLDGRRVLVDVERGRTVPNW 222
AY GR +G R+ + + W
Sbjct: 60 DAYYDMHGRYFEGSRLSIQWAKNPPSSVW 88
>gi|307209128|gb|EFN86270.1| hypothetical protein EAI_15355 [Harpegnathos saltator]
Length = 182
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 15/156 (9%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH---HRDR--DRTRDRER 321
DR +R R+R ER RDRE ER++ E R R+ + + DR RDR +R RDRE
Sbjct: 29 DRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRET 88
Query: 322 ERDRGRE----RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGD 377
ER R RE RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E
Sbjct: 89 ERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ- 147
Query: 378 PDRDRGYSRDRDSDYDRI---DSKHERDRHGERDYD 410
RDR R RD + +R +++ +RDR ER+ D
Sbjct: 148 --RDRETERQRDRETERQRDRETERQRDRETEREID 181
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 11/150 (7%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 323
DR +R R+R ER RDRE ER++ E +R RDR+ RD R RDR +R+R+R
Sbjct: 21 DRETERQRDRETERQRDRETERQRDRET--ERQRDRETERQRDRETERQRDRETERQRDR 78
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 383
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 79 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 135
Query: 384 YSRDRDSDYDRI---DSKHERDRHGERDYD 410
R RD + +R +++ +RDR ER D
Sbjct: 136 TERQRDRETERQRDRETERQRDRETERQRD 165
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++V L + T +++ F+ +G I++V + +P G+AF+EY RD + A +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 200 DGRKLDGRRVLVDVERGR 217
DG ++ G R V++ G+
Sbjct: 60 DGSRICGVRARVELSTGQ 77
>gi|392579834|gb|EIW72961.1| hypothetical protein TREMEDRAFT_42115 [Tremella mesenterica DSM
1558]
Length = 472
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 9/142 (6%)
Query: 83 PGDPLYAPPVEKA--------ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG 134
P PL P ++ A E P E + K L + A+ L + P +
Sbjct: 185 PLSPLRPPDLDIAGVARIADTENPFEDKPEDEKEELRRKTAAASSALTLEMIGDIPFATV 244
Query: 135 -DPYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMK 193
P LFV +L+ T + ++ F +G I +V DK+T YAFIE+ +
Sbjct: 245 RPPEDILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKTGDSLQYAFIEFDERESAE 304
Query: 194 AAYKQADGRKLDGRRVLVDVER 215
AY + +D RR+ VD +
Sbjct: 305 QAYFKMQNVLVDDRRIWVDFSQ 326
>gi|307206228|gb|EFN84308.1| hypothetical protein EAI_10098 [Harpegnathos saltator]
Length = 230
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 323
DR +R R+R ER RDRE ER++ E R RDR+ RD R RDR +R+R+R
Sbjct: 8 DRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDR 65
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 383
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 66 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 122
Query: 384 YSRDRDSDYDRI---DSKHERDRHGERDYD 410
R RD + +R +++ +RDR ER D
Sbjct: 123 TERQRDRETERQRDRETERQRDRETERQRD 152
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 323
DR +R R+R ER RDRE ER++ E R RDR+ RD R RDR +R+R+R
Sbjct: 32 DRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDR 89
Query: 324 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 383
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 90 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 146
Query: 384 YSRDRDSDYDRI---DSKHERDRHGERDYD 410
R RD + +R +++ +RDR ER D
Sbjct: 147 TERQRDRETERQRDRETERQRDRETERQRD 176
>gi|297744453|emb|CBI37715.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 8/90 (8%)
Query: 271 DRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTR-DRERERDRGRE 328
+RD+E+ R R EREKS + H R ++RD HRD RD++RTR R+ ERDR RE
Sbjct: 29 ERDKEKKEHR-ESRRSEREKSSDDKH-REKERDKHRD---KRDKERTRSSRDDERDRARE 83
Query: 329 RDRDRTRDRDRGRDRGRDHERDREKDRDKE 358
R +DR ++RDR + GRD ER++E++RDKE
Sbjct: 84 RTKDREKERDRDHE-GRDAEREKERERDKE 112
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 22/103 (21%)
Query: 308 RHHRDRDRTRDRERERDRGRER----------------DRDRTRDRDRGRDRGRDHERDR 351
+ HRDRDR +R RER+R +E+ D+ R ++RD+ RD+ RD ER R
Sbjct: 13 KSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-RDKERTR 71
Query: 352 EKDRDKERDRDRT----RERERDRDYEVGDPDRDRGYSRDRDS 390
RD ERDR R RE+ERDRD+E D +R++ RD++S
Sbjct: 72 -SSRDDERDRARERTKDREKERDRDHEGRDAEREKERERDKES 113
>gi|452840460|gb|EME42398.1| hypothetical protein DOTSEDRAFT_73280 [Dothistroma septosporum
NZE10]
Length = 230
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 197
TL+V + T + EFE YG + R + + T R +AF+EY RD AY
Sbjct: 7 TTLYVTGFGHGTRARDLAFEFERYGRLVRCDIPAPR-TASSRLFAFVEYESRRDADDAYH 65
Query: 198 QADGRKLDGRRVLVDVERGRTVP--NWR 223
+ +++ GR ++ +E RT P +WR
Sbjct: 66 EMHNKRM-GRDDVLKIEWARTPPSASWR 92
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++ L YE TE + F +G ++LV DKET K +G+ +++Y R A
Sbjct: 35 IYFGGLPYELTEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 200 DGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS-- 257
G ++ GR + VD R + R L +VG E++ +R + PS
Sbjct: 95 GGAEIGGRLIRVDHARYKA-------RDDEDLEQYKVGWEDMLRRERAEKGLPSEEEDET 147
Query: 258 -----RSAEPRIREDR--------HGDRDRERSRERGRDREREREKSLELSHDRPRDRDH 304
R A P I+E+R H D D + E++K +E + R + R
Sbjct: 148 DEEDERRARPMIKEERELQLLIQNHDDDDPMKEF-----LIEEKKKEVEEALRREKRRLE 202
Query: 305 RDDRHHRDRD 314
++DR HRD++
Sbjct: 203 KEDRKHRDKE 212
>gi|297811815|ref|XP_002873791.1| hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp.
lyrata]
gi|297319628|gb|EFH50050.1| hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp.
lyrata]
Length = 812
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 25/125 (20%)
Query: 317 RDRERERDRGRERDRDRTRDRDRGRD--RGRDHERDREKDRDKERDRDRTRERERDRDYE 374
RD+E+ERDR R+R+ D ++ RGRD R +D RDR K+++KE++RDR ++RE DRD E
Sbjct: 52 RDKEKERDRKRDREGDTDKEISRGRDKEREKDKTRDRVKEKEKEKERDRHKDRETDRDNE 111
Query: 375 VGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEH--HRG 432
+++D D R+ + + H EDD + E YEH +RG
Sbjct: 112 -----------KEKDKDRSRVKERASKKSH----------EDDHQTHKAAERYEHFDNRG 150
Query: 433 YGDHD 437
+ D
Sbjct: 151 LNEGD 155
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 13/93 (13%)
Query: 282 RDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 341
RD+E+ER DR RDR+ D ++ R RD+ERE+D + RDR + +++++ R
Sbjct: 52 RDKEKER--------DRKRDREGDTD---KEISRGRDKEREKD--KTRDRVKEKEKEKER 98
Query: 342 DRGRDHERDREKDRDKERDRDRTRERERDRDYE 374
DR +D E DR+ +++K++DR R +ER + +E
Sbjct: 99 DRHKDRETDRDNEKEKDKDRSRVKERASKKSHE 131
>gi|147784275|emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]
Length = 1121
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 321 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 361
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 415 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 472
Query: 362 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 415
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 473 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYXTLNDGYGNRDRYGDS--- 528
Query: 416 DDRGWYDHHENYEHHR 431
WY H+ EH R
Sbjct: 529 ----WYLRHDETEHQR 540
>gi|359472695|ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
Length = 1119
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 321 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 361
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 462 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 519
Query: 362 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 415
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 520 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYETLNDGYGNRDRYGDS--- 575
Query: 416 DDRGWYDHHENYEHHR 431
WY H+ EH R
Sbjct: 576 ----WYLRHDETEHQR 587
>gi|409075035|gb|EKM75421.1| hypothetical protein AGABI1DRAFT_116427 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 191
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRG----YAFIEYMHTRDMK 193
+ LFV+ +T + EFE +GP+ R + + PR YAF+E+ RD +
Sbjct: 3 RILFVSGFHPQTRARDLAYEFERFGPLIRCDVPAPR---NPRASSNPYAFVEFRSGRDAE 59
Query: 194 AAYKQADGRKLDGRRVLVDVERGRTVPNW 222
AY GR +G R+ + + W
Sbjct: 60 DAYYDMHGRYFEGSRLSIQWAKNPPSSVW 88
>gi|297737836|emb|CBI27037.3| unnamed protein product [Vitis vinifera]
Length = 998
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 321 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 361
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 341 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 398
Query: 362 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 415
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 399 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYETLNDGYGNRDRYGDS--- 454
Query: 416 DDRGWYDHHENYEHHR 431
WY H+ EH R
Sbjct: 455 ----WYLRHDETEHQR 466
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Query: 300 RDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGR 345
RDRD +DRDR +DRERERD+ R R++D+ RD++R +DR R
Sbjct: 396 RDRDK-----EKDRDRGKDRERERDKERNREKDKERDKERSKDRER 436
>gi|340716869|ref|XP_003396914.1| PREDICTED: hypothetical protein LOC100648054 [Bombus terrestris]
Length = 1036
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 308 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 367
R RDR +R+R+ RDR RDR ++DR+ RDR +R +DR RDR +++R
Sbjct: 332 RDSRDRLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDR 391
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 408
RD RDR SRDR S D + R+RH RD
Sbjct: 392 PPSRDQR----SRDRPASRDRHSR----DKRDSRERHTSRD 424
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L +E +++ FES+G ++ V++ D ET +G+ F+++ D + A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLN 345
Query: 200 DGRKLDGRRVLVDVERGRT-VP 220
++ GR + V +T VP
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVP 367
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L +E +++ FES+G ++ V++ D ET +G+ F+++ D + A
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLN 345
Query: 200 DGRKLDGRRVLVDVERGRT-VP 220
++ GR + V +T VP
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVP 367
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 272 RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR---TRDRERERDRGRE 328
+DRE S RG D + + RD HRD HHR+ R + +RE DR +E
Sbjct: 1347 KDRESSH-RGSDHSNGTASIVSNGNGSSRDH-HRDKDHHRESHREHRSSEREHRSDRSKE 1404
Query: 329 RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDR 388
DR D++ DR ++H DR+K+ ER++D+ R +R++++ G+ D++ RD+
Sbjct: 1405 HRSDR--DKEHRSDRDKEHRSDRDKEHRSEREKDQHRS-DRNKEHRSGERDKEHRSDRDK 1461
Query: 389 DSDYDRIDSKH----ERDRHGE 406
+ DR D +H E+D+H E
Sbjct: 1462 EHRSDR-DKEHRSEREKDQHRE 1482
>gi|328792239|ref|XP_394165.4| PREDICTED: RNA-binding protein 10-like isoform 1 [Apis mellifera]
Length = 921
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 175 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 234
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 278 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 331
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2086 RERGRTWSRERD------WDRGRDWDRHRDKDAGRDWDRSRERNGSRDKGREWDR 2134
>gi|380027082|ref|XP_003697262.1| PREDICTED: RNA-binding protein 10-like [Apis florea]
Length = 920
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 175 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 234
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 278 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 331
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2086 RERGRTWSRERD------WDRGRDWDRHRDKDAGRDWDRSRERNGSRDKGREWDR 2134
>gi|194864928|ref|XP_001971177.1| GG14576 [Drosophila erecta]
gi|190652960|gb|EDV50203.1| GG14576 [Drosophila erecta]
Length = 1051
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 253 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-- 310
SRGP ++A+ + + + R RSRER + R E S++ H + R+R
Sbjct: 338 SRGP-KAAKSDEKAAQQENVTRSRSRERKDTKSRPLEASIDSRHHKARERSAATPPRKEP 396
Query: 311 -RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERER 369
R R+R++DR+R +++ R RDR R+R+R R ++R R ER R K+R K ++ R++E +R
Sbjct: 397 GRHRERSKDRQRSKEKHRSRDRLRSRERQRSKERQRSRERQRSKERQKSKENQRSKEIQR 456
Query: 370 DRDYEV 375
R +V
Sbjct: 457 SRSKDV 462
>gi|345493607|ref|XP_001603199.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 5-B-like
[Nasonia vitripennis]
Length = 959
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 180 SQTPNNTIMIRGLAQHITENDVRQDILACGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 239
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 278 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 331
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2065 RERGRTWSRERD------WDRGRDWDRHRDKDTGRDWDRSRERNGSRDKGREWDR 2113
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
+++ L TE I F +G V LV DKET K +GY F+ Y D ++
Sbjct: 38 IYIGNLDNRLTEGDIVIVFSQFGEPIDVNLVRDKETGKSKGYCFLAY---EDQRSTILAV 94
Query: 200 D---GRKLDGRRVLVD 212
D G KL + ++VD
Sbjct: 95 DNFNGFKLLDKPLVVD 110
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding protein
srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
++V L + T +++ F+ +G I++V + +P G+AF+EY RD + A +
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 200 DGRKLDGRRVLVDV 213
DG ++ G R V++
Sbjct: 60 DGSRICGVRARVEL 73
>gi|348503678|ref|XP_003439391.1| PREDICTED: WD repeat-containing protein 60 [Oreochromis niloticus]
Length = 1083
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 317 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER-DRDRTRERERDRDYEV 375
+++ R+ + ERDRD+ R RD+ ++R RD +R RE+DR K R D D+ R+RE ++D E+
Sbjct: 120 KEKRRDLEEKHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKRE-EQDREL 178
Query: 376 GDPDRDRGYSRDRDSDYDRIDSKH--ERDRHGERDYDPTDQEDDR 418
D R + R+ +I+ H E+DRH ER+ + ED R
Sbjct: 179 RDDGERRRHKESREVRGAQIEQHHREEKDRHRERERHQNEYEDTR 223
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 199
L+V L +E +++ FES+G ++ V++ D ET +G+ F+++ D + A
Sbjct: 336 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALNLN 394
Query: 200 DGRKLDGRRVLVDVERGRT-VP 220
++ GR + V +T VP
Sbjct: 395 GQLEIAGRAIKVSAVTDQTEVP 416
>gi|319411847|emb|CBQ73890.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Sporisorium reilianum SRZ2]
Length = 543
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 84/217 (38%), Gaps = 31/217 (14%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAA 195
P LFV +L+ T ++ F +G I ++ DK+T YAFIE+ D + A
Sbjct: 254 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDQKDDAERA 313
Query: 196 YKQADGRKLDGRRVLVDVER---------------GRTVPNWRPRRLGGGLGTTRVGGEE 240
Y + +D RR+ VD + GR P G GT RV
Sbjct: 314 YFKMQNVLVDDRRIWVDFSQSVSRLHGDWVRGRNGGREAPKGHYGWGGAESGTARVDSYR 373
Query: 241 VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRE---REREKSLELSHD 297
++ GR + + S + R +DR + D+ S R D+E RERE H
Sbjct: 374 PSEGGGGRNRRDRQRDSGRSTSRYEDDRRRESDQRHSERRPHDKEDDRRERE------HK 427
Query: 298 RPRDRDHRDDRHHRDRDRTRDRERERDRGR-----ER 329
R R D D R R ERD R ER
Sbjct: 428 RSRRDD--DGRQSSSTARQSSGRSERDSSRYDRDQER 462
>gi|383864801|ref|XP_003707866.1| PREDICTED: RNA-binding protein 10-like isoform 1 [Megachile
rotundata]
Length = 920
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 175 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 234
>gi|281206906|gb|EFA81090.1| SWAP/Surp domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1020
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 196
Y TLF+ +L+ TE ++++F YG I V++V K P A + Y + A
Sbjct: 325 YTTLFIRQLANNITEDDLRKQFSKYGSIVMVKIVPPKNPQTPYC-ALVAYTDHKSASDAR 383
Query: 197 KQADGRKLDGRRVLV 211
D +++ GR + +
Sbjct: 384 YYLDNKQMLGREMKI 398
>gi|350422413|ref|XP_003493157.1| PREDICTED: hypothetical protein LOC100744466 [Bombus impatiens]
Length = 1035
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 308 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 367
R RDR +R+R+ RDR RDR ++DR+ RDR +R +DR RDR +++R
Sbjct: 332 RDSRDRLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDR 391
Query: 368 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 408
RD RDR SRDR S D + R+RH RD
Sbjct: 392 PPSRDQR----SRDRPASRDRHSR----DKRDSRERHTSRD 424
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 244 RYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD 303
R + RE++ SR S + + +DR+ RDR SR+R R+R + S DRP RD
Sbjct: 337 RLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDRPPSRD 396
Query: 304 HRD-------DRHHRDRDRTRDRERERDRGRE----RDRDRTRDRDRGRDR 343
R DRH RD+ +R+R RDR R+ RDR+ R+R R+R
Sbjct: 397 QRSRDRPASRDRHSRDKRDSRERHTSRDRPRDGRSSRDRNDMRERRDSRNR 447
>gi|383864803|ref|XP_003707867.1| PREDICTED: RNA-binding protein 10-like isoform 2 [Megachile
rotundata]
Length = 914
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 172 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 231
>gi|307176239|gb|EFN65874.1| RNA-binding protein 10 [Camponotus floridanus]
Length = 958
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 172 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 231
>gi|307213590|gb|EFN88983.1| hypothetical protein EAI_05389 [Harpegnathos saltator]
Length = 130
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 10/128 (7%)
Query: 267 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 326
DR +R R+R ER RDRE ER++ E +R RDR+ R RDR +R+R+R+
Sbjct: 7 DRETERQRDRETERQRDRETERQRDRET--ERQRDRE-----TERQRDRETERQRDRETE 59
Query: 327 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 386
R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR R
Sbjct: 60 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRETER 116
Query: 387 DRDSDYDR 394
RD + +R
Sbjct: 117 QRDRETER 124
>gi|307207090|gb|EFN84899.1| RNA-binding protein 10 [Harpegnathos saltator]
Length = 962
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPI-KRVRLVTDKETNKPRGYAFIEYMHTRD 191
S P T+ + L+ TE+ ++++ + G + K +RL+ K+T RG+AF+E+ T++
Sbjct: 173 SQSPNNTIMIRGLAQHITENDVRQDILNCGLMPKDIRLIRKKDTGASRGFAFVEFNATQE 232
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 256 PSRSAEPRIRE--------DRHGDRDRERSRERGRDR---EREREKSLELSHDRPRDRD- 303
P R + P + RHG E RE R E R +S+ +P+ +
Sbjct: 2027 PVRHSAPLLPPPMDGPLGRSRHGVHSPEHHREDLWSRHSPEVRRRRSISREDSKPQGGER 2086
Query: 304 -----------HRDDRHHRDRDRTRDRERE--------RDRGRERDRDRTRDRDRGRDRG 344
D + DR RDRE+E DRG+E+ R R+ DRGR+R
Sbjct: 2087 FSRFEEELGPGSEDRQQELSEDRRRDREKEGLHSSRLPWDRGQEKRWSREREWDRGRERE 2146
Query: 345 RDHERDREKDRDKERDRDRTRERERDRDYE 374
RDHER RE DR + RD E ER +D E
Sbjct: 2147 RDHERGRESDRSRGRD----EEEERPKDQE 2172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,413,740,420
Number of Sequences: 23463169
Number of extensions: 423892438
Number of successful extensions: 4639563
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 37804
Number of HSP's successfully gapped in prelim test: 37773
Number of HSP's that attempted gapping in prelim test: 2173856
Number of HSP's gapped (non-prelim): 692644
length of query: 480
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 334
effective length of database: 8,933,572,693
effective search space: 2983813279462
effective search space used: 2983813279462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)