Query 011669
Match_columns 480
No_of_seqs 359 out of 2736
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 03:55:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011669.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011669hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1404 Alanine-glyoxylate ami 100.0 5.6E-98 1E-102 704.3 39.5 422 51-473 2-432 (442)
2 COG0160 GabT 4-aminobutyrate a 100.0 1.3E-91 2.9E-96 697.2 46.3 422 55-479 13-445 (447)
3 COG4992 ArgD Ornithine/acetylo 100.0 4.6E-90 9.9E-95 666.0 40.2 389 59-479 5-398 (404)
4 COG0161 BioA Adenosylmethionin 100.0 2.5E-78 5.3E-83 598.0 40.3 411 65-479 7-443 (449)
5 PRK05965 hypothetical protein; 100.0 6.3E-77 1.4E-81 612.6 43.9 415 61-479 4-447 (459)
6 PRK07678 aminotransferase; Val 100.0 9.9E-77 2.2E-81 610.4 44.7 420 59-480 6-450 (451)
7 PRK07482 hypothetical protein; 100.0 4.3E-76 9.2E-81 606.8 45.2 420 58-479 3-454 (461)
8 PRK06938 diaminobutyrate--2-ox 100.0 2.1E-75 4.6E-80 600.9 46.2 418 59-479 23-460 (464)
9 PRK06062 hypothetical protein; 100.0 8.1E-76 1.8E-80 603.1 42.8 416 60-479 13-445 (451)
10 PRK06058 4-aminobutyrate amino 100.0 3.5E-75 7.7E-80 599.1 46.8 419 55-480 14-443 (443)
11 PRK07481 hypothetical protein; 100.0 2.5E-75 5.4E-80 599.7 43.7 396 81-480 24-446 (449)
12 PRK05639 4-aminobutyrate amino 100.0 4.4E-75 9.4E-80 597.4 44.6 419 56-479 11-443 (457)
13 PRK07483 hypothetical protein; 100.0 4.7E-75 1E-79 596.1 42.7 399 80-479 11-437 (443)
14 PRK06931 diaminobutyrate--2-ox 100.0 7.3E-75 1.6E-79 596.7 44.3 418 59-479 18-454 (459)
15 PRK08742 adenosylmethionine--8 100.0 3.1E-74 6.8E-79 592.1 45.7 416 58-479 18-467 (472)
16 TIGR03372 putres_am_tran putre 100.0 5.4E-75 1.2E-79 592.4 39.5 395 60-477 28-442 (442)
17 PRK06943 adenosylmethionine--8 100.0 6.7E-74 1.5E-78 588.6 44.3 410 61-479 12-446 (453)
18 PRK06916 adenosylmethionine--8 100.0 9E-74 1.9E-78 589.4 45.3 417 58-480 11-456 (460)
19 PRK07030 adenosylmethionine--8 100.0 9.1E-74 2E-78 589.0 44.1 392 82-479 30-446 (466)
20 PRK06082 4-aminobutyrate amino 100.0 1.7E-73 3.6E-78 586.6 46.0 416 55-479 29-451 (459)
21 PRK06148 hypothetical protein; 100.0 1.4E-73 3.1E-78 634.1 47.2 417 59-479 584-1010(1013)
22 PRK07036 hypothetical protein; 100.0 1.6E-73 3.6E-78 587.7 44.3 413 62-479 10-452 (466)
23 PRK07480 putative aminotransfe 100.0 1.4E-73 3.1E-78 586.7 43.5 414 61-479 8-448 (456)
24 PRK06105 aminotransferase; Pro 100.0 3.2E-73 6.8E-78 585.3 44.6 414 61-479 6-449 (460)
25 PRK11522 putrescine--2-oxoglut 100.0 1.6E-73 3.4E-78 585.6 42.1 397 61-479 36-451 (459)
26 PRK07495 4-aminobutyrate amino 100.0 6.9E-73 1.5E-77 577.7 45.8 411 62-479 5-421 (425)
27 PRK08593 4-aminobutyrate amino 100.0 5.5E-73 1.2E-77 581.7 45.2 417 59-479 3-429 (445)
28 TIGR00709 dat 2,4-diaminobutyr 100.0 1.8E-73 4E-78 585.8 41.3 397 81-479 21-435 (442)
29 PRK06541 hypothetical protein; 100.0 2E-72 4.3E-77 578.8 45.1 419 59-479 8-455 (460)
30 PRK06917 hypothetical protein; 100.0 1.4E-72 2.9E-77 578.6 43.4 396 82-479 15-437 (447)
31 PRK12403 putative aminotransfe 100.0 2.7E-72 5.8E-77 578.4 45.6 416 60-479 11-452 (460)
32 KOG1402 Ornithine aminotransfe 100.0 3.5E-73 7.5E-78 523.7 34.4 393 58-478 21-426 (427)
33 PLN02760 4-aminobutyrate:pyruv 100.0 1.7E-72 3.8E-77 582.9 43.1 394 81-479 71-491 (504)
34 PRK05769 4-aminobutyrate amino 100.0 8.3E-72 1.8E-76 572.4 46.8 416 55-479 12-439 (441)
35 PRK06918 4-aminobutyrate amino 100.0 5.9E-72 1.3E-76 577.0 45.8 422 55-479 12-443 (451)
36 KOG1403 Predicted alanine-glyo 100.0 1.3E-73 2.8E-78 520.2 27.6 413 59-478 6-436 (452)
37 PRK08360 4-aminobutyrate amino 100.0 5.5E-71 1.2E-75 566.1 46.1 417 59-479 2-426 (443)
38 PRK06777 4-aminobutyrate amino 100.0 6.5E-71 1.4E-75 563.9 45.8 411 61-478 4-420 (421)
39 PRK08117 4-aminobutyrate amino 100.0 5.7E-71 1.2E-75 567.9 45.6 417 59-479 4-429 (433)
40 TIGR00700 GABAtrnsam 4-aminobu 100.0 5.5E-71 1.2E-75 565.5 43.6 397 80-478 14-419 (420)
41 PRK06149 hypothetical protein; 100.0 7.7E-71 1.7E-75 612.5 47.2 420 57-479 543-970 (972)
42 PRK13360 omega amino acid--pyr 100.0 7.9E-71 1.7E-75 564.8 42.1 393 80-480 27-441 (442)
43 PRK09792 4-aminobutyrate trans 100.0 3.1E-70 6.8E-75 558.9 45.4 410 62-478 5-420 (421)
44 PRK05630 adenosylmethionine--8 100.0 1.9E-70 4.1E-75 558.7 40.6 381 81-479 22-420 (422)
45 PRK09221 beta alanine--pyruvat 100.0 3.5E-70 7.6E-75 560.5 42.1 393 80-480 30-444 (445)
46 TIGR00699 GABAtrns_euk 4-amino 100.0 6.4E-70 1.4E-74 555.6 42.8 405 51-477 13-464 (464)
47 PRK06173 adenosylmethionine--8 100.0 5.1E-70 1.1E-74 556.2 41.1 401 62-479 5-425 (429)
48 PRK07986 adenosylmethionine--8 100.0 1.2E-69 2.6E-74 552.8 42.1 381 82-479 26-423 (428)
49 PRK04612 argD acetylornithine 100.0 7.6E-69 1.7E-73 545.2 41.4 374 80-479 21-403 (408)
50 TIGR02407 ectoine_ectB diamino 100.0 8.6E-69 1.9E-73 546.8 41.3 384 81-479 17-412 (412)
51 PRK04013 argD acetylornithine/ 100.0 5.8E-69 1.3E-73 536.0 37.8 356 78-479 3-360 (364)
52 PRK12389 glutamate-1-semialdeh 100.0 3.6E-68 7.8E-73 544.8 43.3 407 58-480 4-428 (428)
53 PLN02482 glutamate-1-semialdeh 100.0 6.2E-68 1.3E-72 544.4 43.8 409 57-480 50-474 (474)
54 PRK09264 diaminobutyrate--2-ox 100.0 3E-68 6.5E-73 545.4 40.1 384 81-479 21-416 (425)
55 COG0001 HemL Glutamate-1-semia 100.0 9.8E-68 2.1E-72 516.0 39.5 409 57-480 4-429 (432)
56 PRK05964 adenosylmethionine--8 100.0 1.7E-67 3.6E-72 540.6 42.4 384 80-480 23-423 (423)
57 PLN00144 acetylornithine trans 100.0 2E-67 4.3E-72 532.0 38.4 366 85-480 1-381 (382)
58 TIGR03246 arg_catab_astC succi 100.0 1.1E-66 2.3E-71 530.6 42.3 372 80-479 16-395 (397)
59 PRK08297 L-lysine aminotransfe 100.0 2.2E-66 4.7E-71 532.1 41.4 382 82-480 27-442 (443)
60 KOG1401 Acetylornithine aminot 100.0 4.5E-67 9.8E-72 498.7 33.2 378 78-480 35-431 (433)
61 PRK03715 argD acetylornithine 100.0 2.7E-66 5.8E-71 525.3 38.6 368 80-480 17-394 (395)
62 PRK07046 aminotransferase; Val 100.0 1.3E-65 2.7E-70 526.8 42.7 401 58-480 28-451 (453)
63 PRK12381 bifunctional succinyl 100.0 1.5E-65 3.3E-70 523.6 40.9 372 80-479 20-399 (406)
64 PLN02624 ornithine-delta-amino 100.0 6.5E-65 1.4E-69 526.0 45.5 395 59-479 38-444 (474)
65 PRK00615 glutamate-1-semialdeh 100.0 6E-65 1.3E-69 518.4 43.1 405 58-479 5-428 (433)
66 PLN02974 adenosylmethionine-8- 100.0 1.9E-64 4E-69 542.2 43.3 414 59-477 313-816 (817)
67 TIGR03251 LAT_fam L-lysine 6-t 100.0 1.9E-64 4.1E-69 517.4 39.0 395 62-476 3-431 (431)
68 TIGR00508 bioA adenosylmethion 100.0 6.2E-64 1.3E-68 512.5 42.3 405 58-479 2-426 (427)
69 PRK04073 rocD ornithine--oxo-a 100.0 6.7E-64 1.5E-68 510.7 41.2 382 59-477 3-395 (396)
70 PRK08088 4-aminobutyrate amino 100.0 3.6E-63 7.8E-68 508.9 46.3 414 61-480 5-424 (425)
71 PF00202 Aminotran_3: Aminotra 100.0 2.4E-65 5.3E-70 508.3 27.3 329 84-416 1-338 (339)
72 PRK01278 argD acetylornithine 100.0 5.3E-63 1.2E-67 503.4 41.5 369 80-480 12-389 (389)
73 TIGR00713 hemL glutamate-1-sem 100.0 1.1E-62 2.4E-67 506.1 41.9 407 59-480 1-423 (423)
74 PRK00062 glutamate-1-semialdeh 100.0 1.7E-61 3.7E-66 496.0 41.4 408 58-480 2-425 (426)
75 PRK05093 argD bifunctional N-s 100.0 1.3E-60 2.8E-65 487.6 42.1 372 80-479 21-400 (403)
76 PRK03244 argD acetylornithine 100.0 8.1E-60 1.8E-64 481.6 41.8 384 61-479 8-394 (398)
77 PRK02936 argD acetylornithine 100.0 1.2E-59 2.6E-64 477.1 40.3 366 80-477 10-377 (377)
78 TIGR01885 Orn_aminotrans ornit 100.0 6.7E-59 1.5E-63 474.8 41.2 389 61-478 2-401 (401)
79 PRK00854 rocD ornithine--oxo-a 100.0 8.5E-58 1.9E-62 467.1 42.1 385 60-478 5-400 (401)
80 PRK02627 acetylornithine amino 100.0 1.4E-57 3.1E-62 465.0 41.9 385 60-479 3-394 (396)
81 PTZ00125 ornithine aminotransf 100.0 1.6E-57 3.4E-62 465.2 41.0 374 79-479 11-395 (400)
82 PRK06209 glutamate-1-semialdeh 100.0 1.7E-57 3.6E-62 466.1 39.9 387 61-479 2-405 (431)
83 PRK04260 acetylornithine amino 100.0 1.9E-56 4.1E-61 452.9 40.1 364 80-477 10-375 (375)
84 cd00610 OAT_like Acetyl ornith 100.0 6.1E-56 1.3E-60 455.5 42.3 392 80-477 17-413 (413)
85 KOG1405 4-aminobutyrate aminot 100.0 1.1E-54 2.4E-59 404.2 29.1 421 37-480 19-484 (484)
86 TIGR00707 argD acetylornithine 100.0 5E-50 1.1E-54 407.1 39.2 365 80-477 8-379 (379)
87 PRK07505 hypothetical protein; 100.0 3.5E-39 7.5E-44 329.7 34.3 349 80-479 27-399 (402)
88 PLN02822 serine palmitoyltrans 100.0 1.1E-35 2.3E-40 308.4 34.5 354 83-479 94-477 (481)
89 PRK13393 5-aminolevulinate syn 100.0 6.9E-34 1.5E-38 291.0 34.1 331 97-479 43-396 (406)
90 TIGR01821 5aminolev_synth 5-am 100.0 2.6E-32 5.6E-37 279.2 35.5 334 96-479 42-396 (402)
91 PRK09064 5-aminolevulinate syn 100.0 2.6E-32 5.6E-37 279.7 33.9 331 98-479 45-397 (407)
92 PRK05958 8-amino-7-oxononanoat 100.0 1E-31 2.2E-36 273.2 35.9 347 79-477 20-385 (385)
93 PRK07179 hypothetical protein; 100.0 3.5E-31 7.5E-36 271.2 35.6 337 78-479 41-398 (407)
94 TIGR01825 gly_Cac_T_rel pyrido 100.0 5.8E-31 1.3E-35 267.8 35.7 348 79-479 14-381 (385)
95 PRK06939 2-amino-3-ketobutyrat 100.0 5.3E-30 1.2E-34 261.7 35.5 348 82-480 25-394 (397)
96 TIGR01822 2am3keto_CoA 2-amino 100.0 2.9E-29 6.3E-34 256.0 35.0 351 79-479 18-389 (393)
97 COG0436 Aspartate/tyrosine/aro 100.0 6.9E-30 1.5E-34 257.9 30.0 344 99-479 28-391 (393)
98 PLN03227 serine palmitoyltrans 100.0 4.1E-29 8.9E-34 253.6 32.2 328 116-479 13-382 (392)
99 TIGR00858 bioF 8-amino-7-oxono 100.0 1.3E-28 2.8E-33 248.0 34.1 338 85-474 3-360 (360)
100 PRK13392 5-aminolevulinate syn 100.0 3.5E-28 7.6E-33 249.2 33.7 333 97-479 44-397 (410)
101 PRK03317 histidinol-phosphate 100.0 1.6E-27 3.5E-32 241.0 31.3 326 100-478 27-363 (368)
102 PRK06225 aspartate aminotransf 100.0 2.1E-27 4.5E-32 241.2 30.7 340 97-479 26-376 (380)
103 PRK07324 transaminase; Validat 100.0 1.8E-27 3.8E-32 240.8 27.3 343 94-479 21-370 (373)
104 PRK07682 hypothetical protein; 100.0 5.2E-27 1.1E-31 238.1 30.8 338 100-479 21-376 (378)
105 COG0156 BioF 7-keto-8-aminopel 100.0 1.5E-26 3.2E-31 229.2 32.4 338 86-476 27-387 (388)
106 PRK03158 histidinol-phosphate 100.0 5.1E-27 1.1E-31 236.6 28.7 323 100-476 30-358 (359)
107 PLN02955 8-amino-7-oxononanoat 100.0 2.4E-26 5.3E-31 232.7 33.2 332 97-478 100-460 (476)
108 PRK07681 aspartate aminotransf 100.0 3.9E-27 8.4E-32 240.7 27.7 337 98-475 31-384 (399)
109 PLN00175 aminotransferase fami 100.0 1.4E-26 2.9E-31 237.2 31.5 340 100-479 55-413 (413)
110 PRK06108 aspartate aminotransf 100.0 1.1E-26 2.4E-31 236.0 29.9 339 100-479 25-382 (382)
111 PRK06207 aspartate aminotransf 100.0 1.8E-26 4E-31 235.9 30.2 344 99-479 39-402 (405)
112 PRK02731 histidinol-phosphate 100.0 2E-26 4.3E-31 232.9 29.9 329 97-479 30-366 (367)
113 PRK01533 histidinol-phosphate 100.0 6.2E-27 1.3E-31 235.9 26.1 324 97-478 27-354 (366)
114 PRK07366 succinyldiaminopimela 100.0 1.2E-26 2.7E-31 236.2 28.3 342 97-477 28-388 (388)
115 PRK14809 histidinol-phosphate 100.0 1.4E-26 3E-31 233.2 28.2 326 97-478 28-356 (357)
116 PRK06290 aspartate aminotransf 100.0 3.8E-26 8.1E-31 233.4 28.2 350 97-480 42-406 (410)
117 PRK08636 aspartate aminotransf 100.0 8.6E-26 1.9E-30 231.0 30.8 354 97-479 31-400 (403)
118 PRK15481 transcriptional regul 100.0 5.1E-26 1.1E-30 234.7 28.5 333 100-478 86-430 (431)
119 PRK05764 aspartate aminotransf 100.0 7.2E-26 1.6E-30 231.0 28.8 346 98-479 30-391 (393)
120 PRK09147 succinyldiaminopimela 100.0 1.8E-25 3.9E-30 228.2 31.5 341 97-478 27-395 (396)
121 PRK08361 aspartate aminotransf 99.9 1E-25 2.2E-30 229.6 28.9 344 99-480 33-391 (391)
122 PRK08960 hypothetical protein; 99.9 8.7E-26 1.9E-30 229.8 27.9 339 98-478 31-386 (387)
123 PRK08153 histidinol-phosphate 99.9 6.4E-26 1.4E-30 229.1 26.6 328 99-479 32-365 (369)
124 PRK02610 histidinol-phosphate 99.9 1.5E-25 3.2E-30 227.0 28.8 336 99-480 28-372 (374)
125 TIGR03537 DapC succinyldiamino 99.9 1.8E-25 3.9E-30 224.4 28.8 337 100-475 1-349 (350)
126 PRK06358 threonine-phosphate d 99.9 3.7E-25 8E-30 222.3 31.0 325 99-477 19-353 (354)
127 TIGR01264 tyr_amTase_E tyrosin 99.9 1.7E-25 3.7E-30 228.8 28.7 349 98-480 30-400 (401)
128 PLN02187 rooty/superroot1 99.9 2.4E-25 5.3E-30 230.5 30.1 353 96-479 63-438 (462)
129 PRK06348 aspartate aminotransf 99.9 3.1E-25 6.8E-30 225.4 30.4 331 100-476 30-382 (384)
130 PRK08056 threonine-phosphate d 99.9 2.1E-25 4.6E-30 224.4 28.6 331 96-478 17-354 (356)
131 PLN02483 serine palmitoyltrans 99.9 1.3E-24 2.7E-29 226.2 35.1 335 96-479 97-466 (489)
132 PLN00143 tyrosine/nicotianamin 99.9 2.8E-25 6E-30 227.4 29.6 352 95-479 28-404 (409)
133 PRK09276 LL-diaminopimelate am 99.9 2.6E-25 5.5E-30 226.3 28.6 336 98-475 30-384 (385)
134 COG0079 HisC Histidinol-phosph 99.9 3.1E-25 6.8E-30 220.3 28.1 324 100-479 23-354 (356)
135 PTZ00433 tyrosine aminotransfe 99.9 5.7E-25 1.2E-29 225.5 31.0 353 93-479 27-408 (412)
136 PRK08068 transaminase; Reviewe 99.9 2.9E-25 6.2E-30 226.2 28.6 338 97-476 30-386 (389)
137 TIGR01141 hisC histidinol-phos 99.9 2.4E-25 5.2E-30 223.3 27.4 318 99-474 19-346 (346)
138 TIGR03540 DapC_direct LL-diami 99.9 4.2E-25 9.2E-30 224.5 29.6 337 98-475 28-382 (383)
139 PRK09148 aminotransferase; Val 99.9 3.1E-25 6.7E-30 226.9 28.7 345 97-479 28-390 (405)
140 cd06454 KBL_like KBL_like; thi 99.9 1E-24 2.2E-29 218.9 31.7 328 99-476 1-348 (349)
141 PLN02656 tyrosine transaminase 99.9 4.8E-25 1E-29 225.8 29.9 352 96-479 28-403 (409)
142 PRK12414 putative aminotransfe 99.9 4.2E-25 9E-30 224.5 28.8 336 100-475 30-383 (384)
143 PRK06107 aspartate aminotransf 99.9 6.2E-25 1.3E-29 224.6 30.1 352 98-480 32-401 (402)
144 PRK00950 histidinol-phosphate 99.9 5.7E-25 1.2E-29 221.8 29.2 324 96-478 31-361 (361)
145 PRK05937 8-amino-7-oxononanoat 99.9 1.2E-24 2.6E-29 219.9 31.2 321 100-479 5-350 (370)
146 PRK09082 methionine aminotrans 99.9 3.8E-25 8.2E-30 225.0 27.6 339 99-475 30-385 (386)
147 PRK05942 aspartate aminotransf 99.9 7.8E-25 1.7E-29 223.3 29.4 335 98-476 34-389 (394)
148 PRK13355 bifunctional HTH-doma 99.9 4.2E-25 9.1E-30 232.5 28.2 346 96-479 143-514 (517)
149 PLN03026 histidinol-phosphate 99.9 9E-25 2E-29 221.5 29.4 326 97-476 50-379 (380)
150 PRK05839 hypothetical protein; 99.9 6E-25 1.3E-29 222.5 27.3 332 97-478 22-373 (374)
151 COG1167 ARO8 Transcriptional r 99.9 5.6E-25 1.2E-29 227.0 27.3 345 96-479 86-455 (459)
152 PRK07777 aminotransferase; Val 99.9 1.5E-24 3.2E-29 220.9 30.0 337 100-478 25-385 (387)
153 PLN00145 tyrosine/nicotianamin 99.9 1.9E-24 4.1E-29 222.2 31.1 349 98-479 51-424 (430)
154 TIGR03538 DapC_gpp succinyldia 99.9 1.2E-24 2.5E-29 222.0 28.9 339 95-476 24-392 (393)
155 PRK07683 aminotransferase A; V 99.9 2.8E-24 6.1E-29 218.7 30.6 338 99-479 28-383 (387)
156 PRK07865 N-succinyldiaminopime 99.9 1.4E-24 3.1E-29 219.1 28.0 323 98-474 26-363 (364)
157 PRK07309 aromatic amino acid a 99.9 3.6E-24 7.7E-29 218.2 31.0 341 99-479 30-388 (391)
158 PRK05957 aspartate aminotransf 99.9 2.6E-24 5.5E-29 219.1 29.8 340 100-479 28-385 (389)
159 PRK08363 alanine aminotransfer 99.9 2.1E-24 4.5E-29 220.5 29.2 345 97-479 28-394 (398)
160 PRK08912 hypothetical protein; 99.9 1.9E-24 4E-29 220.1 28.5 339 100-479 27-386 (387)
161 PRK07550 hypothetical protein; 99.9 1.4E-24 2.9E-29 221.0 27.2 341 97-476 27-384 (386)
162 TIGR03539 DapC_actino succinyl 99.9 1.6E-24 3.6E-29 218.0 27.4 323 97-473 19-356 (357)
163 PRK08175 aminotransferase; Val 99.9 3.8E-24 8.3E-29 218.3 30.3 344 98-479 28-389 (395)
164 PRK06855 aminotransferase; Val 99.9 2E-24 4.2E-29 222.6 28.2 356 98-479 31-429 (433)
165 PRK14807 histidinol-phosphate 99.9 6.9E-24 1.5E-28 213.0 31.4 323 100-477 23-350 (351)
166 cd00613 GDC-P Glycine cleavage 99.9 2.3E-24 5.1E-29 220.3 28.2 330 106-473 23-398 (398)
167 PRK07568 aspartate aminotransf 99.9 4E-24 8.6E-29 218.5 29.9 337 98-479 29-392 (397)
168 PRK07392 threonine-phosphate d 99.9 6.2E-24 1.3E-28 214.1 30.2 327 99-478 22-358 (360)
169 PTZ00377 alanine aminotransfer 99.9 5.5E-24 1.2E-28 222.2 29.1 341 117-479 90-475 (481)
170 TIGR01265 tyr_nico_aTase tyros 99.9 6.7E-24 1.4E-28 217.0 29.0 350 96-479 28-401 (403)
171 PRK04870 histidinol-phosphate 99.9 1.2E-23 2.7E-28 211.7 30.3 325 98-477 25-356 (356)
172 PRK09105 putative aminotransfe 99.9 5.8E-24 1.3E-28 214.7 27.9 322 99-478 43-369 (370)
173 PRK07337 aminotransferase; Val 99.9 8.5E-24 1.8E-28 215.3 29.1 338 98-477 29-387 (388)
174 PRK03321 putative aminotransfe 99.9 8E-24 1.7E-28 212.7 27.7 323 100-479 23-351 (352)
175 PRK05387 histidinol-phosphate 99.9 1.3E-23 2.9E-28 211.2 29.2 323 98-478 23-352 (353)
176 cd00609 AAT_like Aspartate ami 99.9 5.1E-24 1.1E-28 213.2 25.8 320 116-475 12-350 (350)
177 COG1168 MalY Bifunctional PLP- 99.9 1.7E-23 3.6E-28 200.0 27.2 350 90-479 14-386 (388)
178 PRK14808 histidinol-phosphate 99.9 1.3E-23 2.8E-28 209.4 27.7 322 87-475 7-333 (335)
179 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7.9E-24 1.7E-28 210.7 26.1 305 99-473 17-329 (330)
180 PRK09265 aminotransferase AlaT 99.9 1.8E-23 3.9E-28 214.0 29.3 345 96-479 30-401 (404)
181 KOG0257 Kynurenine aminotransf 99.9 2.1E-24 4.5E-29 208.2 19.8 335 116-474 45-414 (420)
182 PRK07590 L,L-diaminopimelate a 99.9 7.7E-24 1.7E-28 217.0 25.4 343 98-477 33-409 (409)
183 PRK05166 histidinol-phosphate 99.9 2.7E-23 5.8E-28 210.3 27.6 328 98-478 35-370 (371)
184 PRK05664 threonine-phosphate d 99.9 2.7E-23 5.9E-28 206.8 27.2 308 99-479 20-328 (330)
185 PF00155 Aminotran_1_2: Aminot 99.9 1.9E-23 4.1E-28 210.8 25.7 341 100-473 2-363 (363)
186 KOG1359 Glycine C-acetyltransf 99.9 2.2E-22 4.7E-27 184.5 29.1 359 60-478 22-411 (417)
187 PLN02672 methionine S-methyltr 99.9 7.7E-23 1.7E-27 223.8 31.2 355 93-478 691-1079(1082)
188 PRK06425 histidinol-phosphate 99.9 4E-23 8.6E-28 205.8 26.2 286 136-477 35-331 (332)
189 TIGR03542 DAPAT_plant LL-diami 99.9 3.3E-23 7.2E-28 211.9 25.5 342 98-477 32-402 (402)
190 TIGR03576 pyridox_MJ0158 pyrid 99.9 6.9E-23 1.5E-27 204.2 26.4 303 116-478 34-346 (346)
191 PRK13520 L-tyrosine decarboxyl 99.9 3.8E-22 8.1E-27 202.0 31.9 318 115-479 31-371 (371)
192 KOG0259 Tyrosine aminotransfer 99.9 1.9E-22 4.1E-27 191.3 27.2 349 99-479 61-433 (447)
193 PRK06959 putative threonine-ph 99.9 7.6E-23 1.7E-27 204.1 25.7 308 99-479 24-333 (339)
194 PLN02376 1-aminocyclopropane-1 99.9 1.2E-22 2.6E-27 211.6 28.1 297 156-478 117-437 (496)
195 PRK06836 aspartate aminotransf 99.9 1.7E-22 3.6E-27 206.1 28.6 336 98-479 32-391 (394)
196 TIGR03392 FeS_syn_CsdA cystein 99.9 9.5E-22 2.1E-26 201.0 34.2 333 98-479 16-395 (398)
197 COG1104 NifS Cysteine sulfinat 99.9 8.5E-23 1.8E-27 199.0 24.9 334 100-479 3-377 (386)
198 PLN02721 threonine aldolase 99.9 2.8E-22 6E-27 201.5 28.3 331 100-479 6-352 (353)
199 PRK03967 histidinol-phosphate 99.9 3.4E-22 7.3E-27 199.5 28.5 315 97-478 16-333 (337)
200 PRK04781 histidinol-phosphate 99.9 1.1E-22 2.4E-27 205.1 25.1 301 137-478 55-362 (364)
201 PLN02450 1-aminocyclopropane-1 99.9 3.7E-22 8E-27 207.1 29.3 313 143-479 88-430 (468)
202 PRK07908 hypothetical protein; 99.9 7.2E-22 1.6E-26 198.3 30.0 314 98-478 21-346 (349)
203 PRK09440 avtA valine--pyruvate 99.9 2.1E-22 4.6E-27 207.0 26.6 344 100-479 31-411 (416)
204 PRK10874 cysteine sulfinate de 99.9 2.8E-21 6.2E-26 197.7 34.7 333 98-479 19-398 (401)
205 PLN02607 1-aminocyclopropane-1 99.9 2.7E-22 5.8E-27 206.7 27.1 310 142-479 100-437 (447)
206 PLN02231 alanine transaminase 99.9 4.1E-22 8.9E-27 208.8 28.7 336 118-479 143-527 (534)
207 PRK08354 putative aminotransfe 99.9 9.2E-22 2E-26 194.2 29.6 301 97-476 6-309 (311)
208 PRK01688 histidinol-phosphate 99.9 7.1E-23 1.5E-27 205.6 21.6 292 136-474 52-351 (351)
209 TIGR03402 FeS_nifS cysteine de 99.9 9E-22 1.9E-26 199.9 28.8 328 101-479 2-372 (379)
210 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5.9E-22 1.3E-26 200.3 27.0 304 140-479 50-368 (370)
211 PTZ00376 aspartate aminotransf 99.9 3E-22 6.6E-27 204.8 24.4 338 99-479 29-403 (404)
212 PRK09275 aspartate aminotransf 99.9 6.4E-22 1.4E-26 204.8 26.1 346 100-479 101-517 (527)
213 PRK09257 aromatic amino acid a 99.9 5.4E-22 1.2E-26 202.5 24.4 339 100-477 27-396 (396)
214 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.7E-21 8E-26 193.4 29.6 321 116-477 10-355 (355)
215 PRK09295 bifunctional cysteine 99.9 2.2E-20 4.8E-25 191.4 35.1 332 98-478 23-403 (406)
216 TIGR02326 transamin_PhnW 2-ami 99.9 5.8E-21 1.3E-25 192.8 29.0 319 116-478 14-361 (363)
217 PRK04635 histidinol-phosphate 99.9 3.5E-21 7.5E-26 193.6 26.4 291 136-476 55-352 (354)
218 cd06453 SufS_like Cysteine des 99.9 2.1E-20 4.5E-25 189.5 32.2 320 114-473 9-373 (373)
219 cd06451 AGAT_like Alanine-glyo 99.9 5.2E-21 1.1E-25 192.6 27.2 317 116-478 10-356 (356)
220 KOG1360 5-aminolevulinate synt 99.9 1.2E-20 2.7E-25 179.5 27.3 316 116-479 186-524 (570)
221 TIGR03801 asp_4_decarbox aspar 99.9 1.9E-21 4.1E-26 201.0 23.7 350 100-479 95-516 (521)
222 PRK02948 cysteine desulfurase; 99.9 1.2E-20 2.5E-25 191.8 28.8 329 100-479 2-374 (381)
223 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.6E-20 5.7E-25 189.4 30.1 337 111-479 27-381 (387)
224 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.9E-20 1.1E-24 188.3 31.2 326 99-473 18-397 (397)
225 cd06502 TA_like Low-specificit 99.9 1E-20 2.2E-25 188.9 25.4 322 103-475 1-337 (338)
226 PLN02397 aspartate transaminas 99.9 1.1E-20 2.4E-25 194.1 25.8 335 101-478 50-420 (423)
227 PRK08637 hypothetical protein; 99.9 2.1E-20 4.4E-25 190.4 27.3 304 142-480 45-387 (388)
228 PRK10534 L-threonine aldolase; 99.9 1.2E-20 2.7E-25 188.1 24.3 321 101-478 1-332 (333)
229 TIGR01979 sufS cysteine desulf 99.9 3.1E-19 6.7E-24 182.8 33.8 332 99-479 19-401 (403)
230 COG0520 csdA Selenocysteine ly 99.9 2.1E-19 4.5E-24 181.6 31.9 332 99-478 23-404 (405)
231 PLN02855 Bifunctional selenocy 99.9 1.4E-19 2.9E-24 186.6 30.9 336 98-479 32-418 (424)
232 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.2E-19 9.1E-24 179.9 33.2 317 116-475 32-372 (373)
233 PLN02409 serine--glyoxylate am 99.9 6.1E-20 1.3E-24 187.5 27.1 323 115-479 19-372 (401)
234 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.4E-20 1.6E-24 184.5 27.4 329 114-477 11-360 (361)
235 TIGR01814 kynureninase kynuren 99.9 1.3E-19 2.9E-24 185.5 29.6 334 97-477 26-405 (406)
236 TIGR03403 nifS_epsilon cystein 99.9 1.9E-19 4.1E-24 183.0 29.4 327 101-479 2-375 (382)
237 TIGR02006 IscS cysteine desulf 99.9 4.1E-19 8.9E-24 181.7 31.7 328 99-479 4-377 (402)
238 PRK13238 tnaA tryptophanase/L- 99.9 2.4E-19 5.3E-24 184.8 30.0 331 119-478 58-432 (460)
239 PRK13479 2-aminoethylphosphona 99.9 2E-19 4.4E-24 181.8 29.0 321 116-480 16-364 (368)
240 PLN02368 alanine transaminase 99.9 5.7E-20 1.2E-24 187.0 22.1 207 142-369 112-340 (407)
241 PF00266 Aminotran_5: Aminotra 99.9 8.5E-19 1.8E-23 177.5 30.5 320 101-469 2-371 (371)
242 PLN02651 cysteine desulfurase 99.8 2.7E-19 5.9E-24 180.6 24.2 319 101-467 2-364 (364)
243 TIGR01977 am_tr_V_EF2568 cyste 99.8 3.7E-18 8E-23 173.2 30.5 319 116-475 12-375 (376)
244 KOG0256 1-aminocyclopropane-1- 99.8 2.9E-18 6.4E-23 164.4 27.1 337 95-478 104-460 (471)
245 PRK14012 cysteine desulfurase; 99.8 6.3E-18 1.4E-22 173.1 28.8 327 99-479 4-379 (404)
246 cd00378 SHMT Serine-glycine hy 99.8 6.6E-18 1.4E-22 172.9 27.3 335 99-479 19-385 (402)
247 cd06450 DOPA_deC_like DOPA dec 99.8 1.1E-17 2.4E-22 167.6 27.3 283 140-475 37-344 (345)
248 TIGR01437 selA_rel uncharacter 99.8 1.9E-16 4.1E-21 159.4 31.3 321 99-477 8-363 (363)
249 KOG0634 Aromatic amino acid am 99.8 9.5E-17 2.1E-21 155.4 27.1 296 160-479 126-466 (472)
250 cd00617 Tnase_like Tryptophana 99.8 4.2E-17 9.2E-22 166.0 26.1 350 95-479 16-408 (431)
251 COG2008 GLY1 Threonine aldolas 99.8 3.4E-17 7.4E-22 156.6 23.5 333 102-477 2-341 (342)
252 PRK00011 glyA serine hydroxyme 99.8 2.8E-16 6E-21 161.6 31.8 335 99-478 25-388 (416)
253 COG0075 Serine-pyruvate aminot 99.8 2.2E-16 4.7E-21 155.5 28.3 323 116-480 16-364 (383)
254 cd00614 CGS_like CGS_like: Cys 99.8 2.5E-17 5.4E-22 166.4 21.9 293 134-478 33-369 (369)
255 PRK13034 serine hydroxymethylt 99.8 3.8E-16 8.2E-21 159.9 30.2 321 116-478 40-391 (416)
256 PLN02242 methionine gamma-lyas 99.8 5.2E-17 1.1E-21 165.8 23.6 298 135-480 70-416 (418)
257 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.5E-16 5.4E-21 158.2 25.7 302 122-474 3-352 (352)
258 KOG1368 Threonine aldolase [Am 99.8 8.3E-17 1.8E-21 148.4 19.8 330 100-476 22-365 (384)
259 PRK07049 methionine gamma-lyas 99.7 2.9E-16 6.3E-21 160.9 24.0 223 135-393 77-310 (427)
260 TIGR03235 DNA_S_dndA cysteine 99.7 1.8E-16 4E-21 159.3 22.1 310 114-468 8-347 (353)
261 PRK00451 glycine dehydrogenase 99.7 2.4E-15 5.1E-20 156.1 31.0 286 143-477 114-446 (447)
262 TIGR01325 O_suc_HS_sulf O-succ 99.7 3.6E-16 7.9E-21 158.3 22.4 242 134-416 47-306 (380)
263 PTZ00094 serine hydroxymethylt 99.7 2.1E-15 4.6E-20 156.3 27.2 340 100-478 35-407 (452)
264 PRK06767 methionine gamma-lyas 99.7 7.4E-16 1.6E-20 156.4 22.6 289 135-479 55-385 (386)
265 PRK07582 cystathionine gamma-l 99.7 1.3E-15 2.9E-20 153.4 23.8 280 135-474 45-364 (366)
266 PRK08247 cystathionine gamma-s 99.7 1.5E-15 3.1E-20 153.2 23.7 238 134-415 45-287 (366)
267 KOG1549 Cysteine desulfurase N 99.7 2.4E-15 5.2E-20 147.6 23.5 203 99-339 44-257 (428)
268 PRK06460 hypothetical protein; 99.7 1.9E-15 4.2E-20 152.7 23.1 295 133-479 37-374 (376)
269 PRK06234 methionine gamma-lyas 99.7 5.2E-15 1.1E-19 150.8 26.0 290 133-478 56-396 (400)
270 PRK08249 cystathionine gamma-s 99.7 5.5E-15 1.2E-19 150.2 25.7 239 133-416 56-316 (398)
271 COG3977 Alanine-alpha-ketoisov 99.7 9.8E-15 2.1E-19 134.9 24.1 303 138-479 75-411 (417)
272 KOG0633 Histidinol phosphate a 99.7 2.3E-15 5E-20 136.4 19.2 296 139-476 67-374 (375)
273 TIGR02080 O_succ_thio_ly O-suc 99.7 4.9E-15 1.1E-19 149.9 23.9 237 135-416 45-304 (382)
274 PRK08133 O-succinylhomoserine 99.7 3.5E-15 7.6E-20 151.5 22.9 288 135-478 55-389 (390)
275 PRK07050 cystathionine beta-ly 99.7 5E-15 1.1E-19 150.4 23.9 294 133-476 57-392 (394)
276 PRK08045 cystathionine gamma-s 99.7 8.8E-15 1.9E-19 148.1 25.6 238 134-416 45-305 (386)
277 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.5E-14 3.3E-19 146.1 27.2 310 118-477 11-375 (376)
278 PRK05968 hypothetical protein; 99.7 5.2E-15 1.1E-19 150.2 23.3 288 135-476 57-387 (389)
279 PRK07810 O-succinylhomoserine 99.7 5.4E-15 1.2E-19 150.5 23.2 237 135-416 64-323 (403)
280 TIGR01328 met_gam_lyase methio 99.7 9.8E-15 2.1E-19 148.2 24.1 296 133-480 51-391 (391)
281 PRK03080 phosphoserine aminotr 99.7 1.1E-14 2.4E-19 147.5 24.2 314 117-479 24-373 (378)
282 PRK07504 O-succinylhomoserine 99.7 9E-15 2E-19 148.8 23.0 243 133-416 57-318 (398)
283 PRK02769 histidine decarboxyla 99.7 8.7E-14 1.9E-18 140.2 29.6 287 141-478 65-371 (380)
284 PRK04366 glycine dehydrogenase 99.7 8.7E-14 1.9E-18 145.0 29.3 323 115-479 81-448 (481)
285 PRK07269 cystathionine gamma-s 99.7 2.3E-14 5.1E-19 143.9 23.8 235 134-416 47-288 (364)
286 PRK08776 cystathionine gamma-s 99.7 4.8E-14 1E-18 143.6 25.9 237 135-416 54-313 (405)
287 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 2.7E-14 5.9E-19 146.4 23.7 166 135-339 51-219 (418)
288 TIGR01788 Glu-decarb-GAD gluta 99.6 1.6E-13 3.5E-18 140.2 29.0 331 115-480 52-430 (431)
289 PRK07503 methionine gamma-lyas 99.6 6.2E-14 1.3E-18 143.0 25.6 219 134-393 58-282 (403)
290 PRK11658 UDP-4-amino-4-deoxy-L 99.6 8.1E-14 1.8E-18 141.3 25.9 311 118-478 14-378 (379)
291 PRK07811 cystathionine gamma-s 99.6 7.1E-14 1.5E-18 141.9 24.9 237 135-416 55-314 (388)
292 PRK08574 cystathionine gamma-s 99.6 4.6E-14 1E-18 142.9 22.9 217 135-393 47-268 (385)
293 TIGR01364 serC_1 phosphoserine 99.6 9.5E-14 2.1E-18 138.8 24.6 315 116-479 3-348 (349)
294 PRK05355 3-phosphoserine/phosp 99.6 6.8E-14 1.5E-18 140.5 23.5 307 116-479 14-358 (360)
295 PRK08861 cystathionine gamma-s 99.6 9.6E-14 2.1E-18 140.3 24.6 239 133-416 45-306 (388)
296 TIGR01324 cysta_beta_ly_B cyst 99.6 2.6E-14 5.5E-19 144.2 20.3 289 136-479 45-376 (377)
297 KOG1357 Serine palmitoyltransf 99.6 2.5E-14 5.4E-19 139.2 19.2 310 114-476 154-499 (519)
298 PLN03032 serine decarboxylase; 99.6 5.2E-13 1.1E-17 133.7 28.6 308 118-475 37-372 (374)
299 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 2.8E-13 6.2E-18 137.2 27.1 305 118-477 11-374 (375)
300 PLN02724 Molybdenum cofactor s 99.6 3.6E-13 7.9E-18 148.5 29.6 348 99-477 35-486 (805)
301 PRK06084 O-acetylhomoserine am 99.6 1.9E-13 4.2E-18 140.0 24.8 165 135-338 52-219 (425)
302 PRK09028 cystathionine beta-ly 99.6 2.2E-13 4.7E-18 137.6 24.8 236 136-416 56-313 (394)
303 PRK13580 serine hydroxymethylt 99.6 5.3E-13 1.2E-17 136.1 27.6 217 240-478 209-444 (493)
304 TIGR01366 serC_3 phosphoserine 99.6 7.2E-14 1.6E-18 140.5 20.5 313 116-480 14-361 (361)
305 PLN02414 glycine dehydrogenase 99.6 6.4E-13 1.4E-17 146.1 29.0 303 140-479 567-907 (993)
306 TIGR03588 PseC UDP-4-keto-6-de 99.6 1.9E-12 4.2E-17 131.5 30.1 313 118-477 10-380 (380)
307 PRK15407 lipopolysaccharide bi 99.6 9.8E-13 2.1E-17 135.3 27.5 309 121-478 47-435 (438)
308 PLN03226 serine hydroxymethylt 99.6 1.7E-12 3.7E-17 134.4 29.1 325 115-478 45-418 (475)
309 KOG1358 Serine palmitoyltransf 99.6 1.7E-13 3.7E-18 131.1 19.5 353 85-479 81-465 (467)
310 TIGR01329 cysta_beta_ly_E cyst 99.6 4.6E-13 1E-17 135.5 23.7 286 136-479 42-375 (378)
311 PRK08064 cystathionine beta-ly 99.6 8.9E-13 1.9E-17 134.0 24.7 288 136-476 49-383 (390)
312 PRK05967 cystathionine beta-ly 99.6 1E-12 2.2E-17 132.6 23.6 198 135-369 58-257 (395)
313 PRK05939 hypothetical protein; 99.5 7.6E-13 1.7E-17 134.4 22.9 168 133-338 39-207 (397)
314 PRK05994 O-acetylhomoserine am 99.5 1.2E-12 2.6E-17 134.4 24.3 163 136-337 58-223 (427)
315 KOG2862 Alanine-glyoxylate ami 99.5 5.7E-12 1.2E-16 117.5 25.8 313 111-479 39-382 (385)
316 TIGR03531 selenium_SpcS O-phos 99.5 2.4E-12 5.2E-17 131.1 25.7 307 140-477 104-444 (444)
317 PLN02509 cystathionine beta-ly 99.5 1.6E-12 3.5E-17 133.7 24.1 215 137-393 129-348 (464)
318 PRK06176 cystathionine gamma-s 99.5 1.7E-12 3.7E-17 131.3 23.7 173 134-346 43-220 (380)
319 cd01494 AAT_I Aspartate aminot 99.5 1.6E-13 3.4E-18 122.3 14.2 167 143-338 2-170 (170)
320 cd00611 PSAT_like Phosphoserin 99.5 2E-12 4.3E-17 130.0 22.8 315 116-476 10-353 (355)
321 PRK07671 cystathionine beta-ly 99.5 1.9E-12 4.1E-17 130.9 22.6 235 135-415 44-301 (377)
322 PRK08114 cystathionine beta-ly 99.5 2.7E-12 5.8E-17 129.4 23.2 238 134-416 55-316 (395)
323 PRK08248 O-acetylhomoserine am 99.5 4.2E-12 9.1E-17 130.3 24.1 165 135-338 58-225 (431)
324 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.8E-11 3.9E-16 123.2 27.1 345 97-479 36-426 (450)
325 PRK08134 O-acetylhomoserine am 99.5 8.4E-12 1.8E-16 128.0 24.7 165 133-336 56-223 (433)
326 PLN02880 tyrosine decarboxylas 99.5 9.6E-12 2.1E-16 129.5 25.2 318 140-479 121-484 (490)
327 PRK04311 selenocysteine syntha 99.5 1.1E-11 2.3E-16 127.7 24.7 338 93-478 81-463 (464)
328 PRK06702 O-acetylhomoserine am 99.5 7.7E-12 1.7E-16 127.5 23.3 154 137-328 57-212 (432)
329 PRK05367 glycine dehydrogenase 99.5 2.9E-11 6.2E-16 133.8 28.9 302 141-479 542-875 (954)
330 PRK13237 tyrosine phenol-lyase 99.5 5.7E-11 1.2E-15 120.0 28.4 348 97-479 43-433 (460)
331 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 6.5E-12 1.4E-16 126.3 21.7 288 133-478 47-386 (386)
332 PLN02590 probable tyrosine dec 99.5 3.7E-10 8.1E-15 117.9 35.3 317 141-479 170-532 (539)
333 COG0399 WecE Predicted pyridox 99.5 3.8E-11 8.2E-16 118.8 26.3 311 118-479 15-373 (374)
334 cd00615 Orn_deC_like Ornithine 99.5 1.9E-12 4.2E-17 126.7 16.7 229 138-392 56-293 (294)
335 PRK07812 O-acetylhomoserine am 99.5 1.3E-11 2.7E-16 126.6 23.1 164 136-337 64-230 (436)
336 PRK12566 glycine dehydrogenase 99.5 6.2E-11 1.4E-15 128.3 29.2 298 141-479 543-876 (954)
337 TIGR00461 gcvP glycine dehydro 99.4 1.8E-10 3.9E-15 125.5 30.4 301 141-478 530-866 (939)
338 PLN02263 serine decarboxylase 99.4 3.2E-10 7E-15 115.5 30.2 288 141-478 133-442 (470)
339 PF01041 DegT_DnrJ_EryC1: DegT 99.4 4E-11 8.6E-16 121.0 23.5 306 118-474 5-363 (363)
340 COG1103 Archaea-specific pyrid 99.4 4.6E-11 1E-15 109.3 20.6 303 140-479 60-380 (382)
341 PRK05613 O-acetylhomoserine am 99.4 5.9E-11 1.3E-15 121.7 22.2 164 136-337 64-230 (437)
342 TIGR00474 selA seryl-tRNA(sec) 99.4 2E-10 4.3E-15 118.0 26.0 333 93-473 76-453 (454)
343 PRK06434 cystathionine gamma-l 99.4 9.5E-11 2E-15 118.2 22.1 284 135-478 58-383 (384)
344 TIGR03799 NOD_PanD_pyr putativ 99.3 3.3E-10 7.1E-15 118.4 25.4 288 161-472 162-518 (522)
345 COG2873 MET17 O-acetylhomoseri 99.3 4.6E-10 9.9E-15 107.6 22.3 174 128-340 49-225 (426)
346 KOG0258 Alanine aminotransfera 99.3 1.2E-09 2.7E-14 104.9 24.8 313 118-456 89-451 (475)
347 TIGR01365 serC_2 phosphoserine 99.3 6.9E-10 1.5E-14 111.3 22.3 316 117-479 15-373 (374)
348 PLN02452 phosphoserine transam 99.3 2.1E-09 4.5E-14 107.8 24.9 325 101-478 8-362 (365)
349 PF12897 Aminotran_MocR: Alani 99.3 7.2E-10 1.6E-14 107.3 20.1 303 139-477 67-413 (425)
350 TIGR02617 tnaA_trp_ase tryptop 99.2 7.5E-09 1.6E-13 103.6 26.9 351 98-479 40-441 (467)
351 PF01212 Beta_elim_lyase: Beta 99.2 5.6E-12 1.2E-16 122.1 3.8 202 116-343 7-213 (290)
352 COG0626 MetC Cystathionine bet 99.2 6.8E-09 1.5E-13 103.6 24.9 290 134-479 56-394 (396)
353 COG1448 TyrB Aspartate/tyrosin 99.2 1.3E-09 2.8E-14 105.4 18.4 342 81-476 25-395 (396)
354 COG3844 Kynureninase [Amino ac 99.2 3.5E-08 7.6E-13 93.1 26.6 333 94-479 27-402 (407)
355 KOG0053 Cystathionine beta-lya 99.2 7.3E-09 1.6E-13 102.2 22.6 194 136-368 72-270 (409)
356 PRK12462 phosphoserine aminotr 99.1 3.2E-08 6.8E-13 98.4 25.7 323 103-478 7-361 (364)
357 COG0076 GadB Glutamate decarbo 99.1 7.4E-08 1.6E-12 99.1 27.6 254 115-394 73-361 (460)
358 PLN02271 serine hydroxymethylt 99.1 1.4E-07 3E-12 97.4 27.8 283 164-478 220-539 (586)
359 PLN02414 glycine dehydrogenase 99.0 1.1E-07 2.3E-12 105.5 27.5 302 116-474 117-464 (993)
360 COG0112 GlyA Glycine/serine hy 98.9 8.8E-07 1.9E-11 86.3 25.9 323 115-478 37-389 (413)
361 PRK15029 arginine decarboxylas 98.9 1.3E-06 2.8E-11 94.4 28.1 311 142-476 206-601 (755)
362 PRK05367 glycine dehydrogenase 98.9 4E-07 8.6E-12 101.3 24.8 277 142-474 122-437 (954)
363 PF00282 Pyridoxal_deC: Pyrido 98.9 7.8E-07 1.7E-11 89.8 24.6 230 142-394 80-354 (373)
364 COG1003 GcvP Glycine cleavage 98.9 1.4E-06 3E-11 85.6 24.1 297 140-479 108-447 (496)
365 PF00464 SHMT: Serine hydroxym 98.8 4.2E-07 9.1E-12 91.2 18.7 274 164-471 92-397 (399)
366 PF01276 OKR_DC_1: Orn/Lys/Arg 98.7 2.9E-07 6.3E-12 92.7 16.0 231 140-394 65-317 (417)
367 COG3033 TnaA Tryptophanase [Am 98.7 9.6E-06 2.1E-10 77.9 24.4 354 97-478 44-443 (471)
368 PF04864 Alliinase_C: Allinase 98.6 2E-06 4.3E-11 82.7 16.8 263 158-475 66-361 (363)
369 PRK13578 ornithine decarboxyla 98.6 1.1E-05 2.4E-10 86.5 22.7 307 142-476 175-562 (720)
370 PRK15399 lysine decarboxylase 98.5 3.8E-05 8.3E-10 82.4 25.4 306 141-476 195-556 (713)
371 TIGR00461 gcvP glycine dehydro 98.5 6.6E-05 1.4E-09 82.8 26.0 278 142-474 110-426 (939)
372 PRK15400 lysine decarboxylase 98.5 7.2E-05 1.6E-09 80.3 25.4 305 142-476 196-556 (714)
373 COG1921 SelA Selenocysteine sy 98.5 1.8E-05 3.9E-10 78.1 19.0 223 117-374 40-272 (395)
374 TIGR03811 tyr_de_CO2_Ent tyros 98.4 7.2E-05 1.6E-09 79.5 24.9 151 240-394 262-475 (608)
375 COG0403 GcvP Glycine cleavage 98.4 0.0002 4.3E-09 70.8 25.7 285 144-477 123-448 (450)
376 KOG0629 Glutamate decarboxylas 98.4 7.1E-05 1.5E-09 73.6 20.0 307 145-478 145-508 (510)
377 PF03841 SelA: L-seryl-tRNA se 98.3 6.2E-07 1.3E-11 87.6 5.1 229 111-372 11-260 (367)
378 PF02347 GDC-P: Glycine cleava 98.3 0.00015 3.3E-09 73.3 21.8 276 142-473 111-429 (429)
379 KOG3846 L-kynurenine hydrolase 98.2 0.00023 4.9E-09 67.2 20.1 333 111-479 74-461 (465)
380 COG1982 LdcC Arginine/lysine/o 98.2 0.00036 7.7E-09 72.3 22.4 173 141-338 70-246 (557)
381 PF06838 Met_gamma_lyase: Meth 98.2 0.0001 2.3E-09 71.6 16.3 207 116-347 25-247 (403)
382 PF05889 SLA_LP_auto_ag: Solub 98.1 0.001 2.2E-08 65.9 23.0 227 240-478 141-389 (389)
383 COG1932 SerC Phosphoserine ami 98.0 0.0059 1.3E-07 59.6 24.7 194 255-479 145-363 (365)
384 KOG2040 Glycine dehydrogenase 98.0 0.0016 3.4E-08 67.4 21.1 301 141-476 582-915 (1001)
385 KOG1411 Aspartate aminotransfe 98.0 0.00048 1E-08 66.1 16.3 226 82-346 52-299 (427)
386 KOG1412 Aspartate aminotransfe 97.9 0.00053 1.1E-08 64.9 15.3 194 262-479 186-405 (410)
387 KOG1383 Glutamate decarboxylas 97.8 0.0059 1.3E-07 61.2 21.1 320 117-479 93-446 (491)
388 PRK12566 glycine dehydrogenase 97.6 0.027 5.9E-07 62.4 25.5 272 142-474 125-439 (954)
389 KOG0628 Aromatic-L-amino-acid/ 97.4 0.019 4.1E-07 57.6 19.3 226 241-479 220-471 (511)
390 KOG2467 Glycine/serine hydroxy 97.4 0.06 1.3E-06 52.5 21.8 323 115-478 51-425 (477)
391 COG4100 Cystathionine beta-lya 96.1 0.11 2.3E-06 49.5 12.3 187 140-347 64-258 (416)
392 PLN02994 1-aminocyclopropane-1 95.9 0.035 7.7E-07 48.5 7.9 57 138-196 93-153 (153)
393 KOG2040 Glycine dehydrogenase 91.2 24 0.00051 37.8 20.3 268 148-474 170-478 (1001)
394 KOG3843 Predicted serine hydro 85.6 5.4 0.00012 37.6 8.6 227 240-479 143-402 (432)
395 KOG1465 Translation initiation 66.3 1.3E+02 0.0029 29.2 12.6 124 146-303 152-276 (353)
396 KOG2433 Uncharacterized conser 61.3 27 0.00057 34.9 6.7 63 116-181 434-498 (577)
397 cd01522 RHOD_1 Member of the R 57.8 37 0.00081 27.8 6.3 52 148-201 55-106 (117)
398 PRK10886 DnaA initiator-associ 47.7 2.2E+02 0.0047 25.9 10.6 17 277-293 125-141 (196)
399 cd01821 Rhamnogalacturan_acety 46.4 37 0.0008 30.5 5.0 56 237-292 90-150 (198)
400 PLN02672 methionine S-methyltr 45.7 1.3E+02 0.0028 35.0 9.9 48 242-296 518-565 (1082)
401 COG0108 RibB 3,4-dihydroxy-2-b 45.1 28 0.00061 31.6 3.7 35 254-293 156-190 (203)
402 smart00642 Aamy Alpha-amylase 42.4 48 0.001 29.2 4.9 46 254-299 32-94 (166)
403 PRK08335 translation initiatio 42.2 2.4E+02 0.0052 27.2 9.9 115 145-293 98-216 (275)
404 COG1105 FruK Fructose-1-phosph 41.4 48 0.001 32.5 5.0 35 257-295 132-166 (310)
405 PRK06371 translation initiatio 40.6 1.3E+02 0.0029 29.7 8.0 38 254-293 215-254 (329)
406 PRK00162 glpE thiosulfate sulf 40.1 65 0.0014 25.7 5.0 53 145-200 47-99 (108)
407 COG0742 N6-adenine-specific me 39.6 1.2E+02 0.0025 27.5 6.8 82 95-195 41-125 (187)
408 COG0648 Nfo Endonuclease IV [D 38.4 2.3E+02 0.005 27.4 9.0 46 256-302 136-182 (280)
409 PLN02160 thiosulfate sulfurtra 37.7 76 0.0017 26.8 5.2 50 151-202 75-124 (136)
410 PF01008 IF-2B: Initiation fac 37.5 2.1E+02 0.0045 27.4 9.0 120 145-294 96-216 (282)
411 TIGR00511 ribulose_e2b2 ribose 37.3 4E+02 0.0086 26.0 10.8 121 144-298 103-228 (301)
412 cd00158 RHOD Rhodanese Homolog 37.1 74 0.0016 23.7 4.7 40 156-197 49-88 (89)
413 TIGR01305 GMP_reduct_1 guanosi 37.0 3.7E+02 0.0081 26.7 10.3 24 272-295 196-219 (343)
414 PRK08535 translation initiatio 37.0 3.8E+02 0.0082 26.3 10.7 138 118-293 86-227 (310)
415 cd04915 ACT_AK-Ectoine_2 ACT d 37.0 85 0.0018 22.7 4.7 48 428-477 17-64 (66)
416 cd01444 GlpE_ST GlpE sulfurtra 36.7 79 0.0017 24.3 4.9 42 154-197 53-94 (96)
417 cd01836 FeeA_FeeB_like SGNH_hy 36.2 3E+02 0.0065 24.1 9.7 31 144-174 27-57 (191)
418 cd01822 Lysophospholipase_L1_l 35.9 50 0.0011 28.7 4.0 55 238-293 85-140 (177)
419 cd01535 4RHOD_Repeat_4 Member 35.4 1.1E+02 0.0023 26.3 5.8 59 144-205 37-95 (145)
420 PF03602 Cons_hypoth95: Conser 33.5 1.3E+02 0.0028 27.0 6.3 85 96-195 41-125 (183)
421 PF13481 AAA_25: AAA domain; P 33.2 45 0.00098 29.7 3.3 52 240-293 129-184 (193)
422 cd01838 Isoamyl_acetate_hydrol 32.3 3E+02 0.0066 24.0 8.7 18 275-292 143-160 (199)
423 COG0296 GlgB 1,4-alpha-glucan 32.2 37 0.0008 36.7 2.9 32 273-304 212-243 (628)
424 PF12138 Spherulin4: Spherulat 31.9 1.3E+02 0.0027 28.7 6.2 51 241-292 19-71 (253)
425 PF13580 SIS_2: SIS domain; PD 31.5 3.1E+02 0.0068 23.0 8.5 31 140-170 18-48 (138)
426 cd01523 RHOD_Lact_B Member of 30.9 1.1E+02 0.0023 23.9 4.8 43 152-197 56-98 (100)
427 cd01393 recA_like RecA is a b 30.5 4.2E+02 0.009 24.1 9.8 41 253-293 113-164 (226)
428 COG1349 GlpR Transcriptional r 30.2 4.2E+02 0.0091 25.0 9.5 49 254-304 166-215 (253)
429 TIGR02810 agaZ_gatZ D-tagatose 29.9 6.2E+02 0.014 25.9 12.9 183 113-298 18-259 (420)
430 cd01528 RHOD_2 Member of the R 29.7 1.6E+02 0.0034 23.0 5.6 40 157-198 58-97 (101)
431 cd01533 4RHOD_Repeat_2 Member 29.6 1.3E+02 0.0028 23.9 5.2 52 145-198 53-106 (109)
432 TIGR03573 WbuX N-acetyl sugar 29.3 5.8E+02 0.013 25.4 12.3 53 143-195 45-97 (343)
433 PRK05772 translation initiatio 29.2 4.6E+02 0.0099 26.5 9.8 38 254-293 246-285 (363)
434 COG2515 Acd 1-aminocyclopropan 29.2 5.6E+02 0.012 25.1 12.9 29 270-300 257-285 (323)
435 COG3155 ElbB Uncharacterized p 29.1 21 0.00045 31.0 0.3 43 313-355 111-154 (217)
436 cd01449 TST_Repeat_2 Thiosulfa 28.7 1.8E+02 0.0038 23.4 5.9 53 143-197 63-116 (118)
437 PF13407 Peripla_BP_4: Peripla 28.5 1.7E+02 0.0038 27.0 6.7 46 235-293 40-85 (257)
438 COG1004 Ugd Predicted UDP-gluc 27.9 4.5E+02 0.0098 26.8 9.4 56 274-346 217-272 (414)
439 COG0352 ThiE Thiamine monophos 27.7 46 0.001 30.7 2.4 91 240-343 24-118 (211)
440 cd01524 RHOD_Pyr_redox Member 27.7 2.2E+02 0.0047 21.6 6.0 48 146-197 41-88 (90)
441 cd04918 ACT_AK1-AT_2 ACT domai 27.4 1.3E+02 0.0029 21.5 4.4 48 428-477 16-63 (65)
442 TIGR00524 eIF-2B_rel eIF-2B al 27.4 5.9E+02 0.013 24.9 10.1 37 260-298 205-242 (303)
443 cd04920 ACT_AKiii-DAPDC_2 ACT 27.3 1.3E+02 0.0028 21.5 4.3 45 429-477 17-61 (63)
444 cd01519 RHOD_HSP67B2 Member of 26.4 1.3E+02 0.0028 23.6 4.6 51 145-197 53-104 (106)
445 COG0216 PrfA Protein chain rel 26.0 3E+02 0.0066 27.3 7.5 86 117-210 74-175 (363)
446 cd04922 ACT_AKi-HSDH-ThrA_2 AC 26.0 1.5E+02 0.0033 20.7 4.5 48 428-477 17-64 (66)
447 cd01834 SGNH_hydrolase_like_2 25.7 92 0.002 27.3 4.0 56 237-292 85-151 (191)
448 TIGR03865 PQQ_CXXCW PQQ-depend 25.6 1.7E+02 0.0037 25.5 5.6 53 146-200 103-158 (162)
449 cd01534 4RHOD_Repeat_3 Member 24.9 1.9E+02 0.0042 22.2 5.3 37 158-197 57-93 (95)
450 PRK08883 ribulose-phosphate 3- 24.8 5.6E+02 0.012 23.7 11.9 50 240-294 119-173 (220)
451 TIGR02981 phageshock_pspE phag 23.8 2.8E+02 0.006 22.0 6.0 50 145-197 45-95 (101)
452 TIGR00789 flhB_rel flhB C-term 23.5 63 0.0014 24.8 2.1 22 277-298 29-50 (82)
453 PF02082 Rrf2: Transcriptional 23.4 2.1E+02 0.0046 21.6 5.1 41 428-468 41-81 (83)
454 cd00984 DnaB_C DnaB helicase C 22.8 2.2E+02 0.0048 26.3 6.1 40 254-293 123-168 (242)
455 cd04937 ACT_AKi-DapG-BS_2 ACT 22.2 2.1E+02 0.0045 20.2 4.6 46 429-478 18-63 (64)
456 PF00926 DHBP_synthase: 3,4-di 22.2 1.2E+02 0.0027 27.5 4.0 35 254-293 152-186 (194)
457 PRK13505 formate--tetrahydrofo 22.1 2.7E+02 0.0059 29.6 6.9 53 240-298 358-411 (557)
458 TIGR00506 ribB 3,4-dihydroxy-2 22.1 1.3E+02 0.0028 27.5 4.1 35 254-293 157-191 (199)
459 cd01529 4RHOD_Repeats Member o 22.0 1.9E+02 0.0041 22.2 4.7 41 155-197 54-94 (96)
460 cd01527 RHOD_YgaP Member of th 21.9 1.5E+02 0.0033 22.9 4.2 43 154-198 51-93 (99)
461 cd04924 ACT_AK-Arch_2 ACT doma 21.7 2.1E+02 0.0046 19.9 4.6 48 429-478 18-65 (66)
462 TIGR03772 anch_rpt_subst ancho 21.7 4.5E+02 0.0098 27.6 8.5 43 241-292 407-449 (479)
463 PRK13602 putative ribosomal pr 21.6 2.5E+02 0.0053 21.5 5.0 45 241-296 17-61 (82)
464 PRK05096 guanosine 5'-monophos 21.6 8.2E+02 0.018 24.4 9.9 20 276-295 201-220 (346)
465 cd01422 MGS Methylglyoxal synt 21.6 2.8E+02 0.0061 22.6 5.7 46 241-293 60-106 (115)
466 smart00545 JmjN Small domain f 21.0 82 0.0018 20.8 1.9 21 273-293 15-35 (42)
467 smart00450 RHOD Rhodanese Homo 21.0 1.6E+02 0.0034 22.2 4.0 40 157-198 56-95 (100)
468 PRK10785 maltodextrin glucosid 20.9 1.8E+02 0.0039 31.5 5.7 48 254-301 192-252 (598)
469 cd04892 ACT_AK-like_2 ACT doma 20.9 2.6E+02 0.0056 18.9 4.9 48 429-478 17-64 (65)
470 cd01832 SGNH_hydrolase_like_1 20.8 1.4E+02 0.0031 26.1 4.2 55 237-292 88-149 (185)
471 cd01448 TST_Repeat_1 Thiosulfa 20.6 2.2E+02 0.0048 23.0 5.1 54 143-198 64-119 (122)
472 COG0647 NagD Predicted sugar p 20.4 7.7E+02 0.017 23.7 9.8 70 90-172 9-83 (269)
473 TIGR00290 MJ0570_dom MJ0570-re 20.2 6.7E+02 0.015 23.3 8.5 22 159-180 2-23 (223)
No 1
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-98 Score=704.32 Aligned_cols=422 Identities=64% Similarity=1.076 Sum_probs=404.2
Q ss_pred CCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHh
Q 011669 51 SPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~ 130 (480)
.|++|.++.+++.+..++++++|.+..++.+|++|++|+|+||+|.+|++|||+++|++++++|||||+|++|+.+|+.+
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~ 81 (442)
T KOG1404|consen 2 MPPPYTGPSTDQVLQKRRAFLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKK 81 (442)
T ss_pred CCCccCCcchhhHHHHhhhcCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhh
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCc
Q 011669 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 210 (480)
++|++..|.++...+||++|++.+|.+++.++|+||||||||+||++||.|+++.+||+++++|||.+..++++++.+.|
T Consensus 82 l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~ 161 (442)
T KOG1404|consen 82 LYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPW 161 (442)
T ss_pred hEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC--CCeeEecCCCCcCCCCCCC-----hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 211 KFNVVQ--TGVHHALNPDPYRGVFGAD-----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 211 ~~~~~~--~g~~~~~~p~~~~~~~~~d-----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
+.+++. +++.+.++|++||++|+++ .+.+.+++++.+....++.+|++|+|+|||.||++.+|++||++++++
T Consensus 162 k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~ 241 (442)
T KOG1404|consen 162 KQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKV 241 (442)
T ss_pred cccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHH
Confidence 998886 4999999999999999876 567889999999887788899999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCC-ccccCCCcHHHHH
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN-YFNTFGGNPVCTA 362 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~-~~~t~~~~~~~~a 362 (480)
|+|+|+++|+|||||||||+| ++|+++.+|+.|||+||+|++|+|+|+|+|++++|+++.+.+.. +++||++||++|+
T Consensus 242 v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~a 320 (442)
T KOG1404|consen 242 VRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACA 320 (442)
T ss_pred HHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHH
Confidence 999999999999999999999 99999999999999999999999999999999999999999877 9999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCC-CcCCCCHHHHHHHHHHHHHcCc
Q 011669 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR-QLKTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 363 aa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv 441 (480)
+++++|+++++++++++.++++.+|+++|.++.+++++++++||+|+|+++|+++++ ..+.|.......+.+.|+++|+
T Consensus 321 vg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gv 400 (442)
T KOG1404|consen 321 VGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGV 400 (442)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCe
Confidence 999999999999999999999999999999999999999999999999999999998 4555666678889999999999
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
+++.++.+++++||+||+|+|++|||.+++..
T Consensus 401 lvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 401 LVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 99999999999999999999999998888855
No 2
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-91 Score=697.23 Aligned_cols=422 Identities=40% Similarity=0.628 Sum_probs=388.0
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
.++++..++++++.+++..+.... ..|+.+++++|+||||+|||+||||.+|+++.++||+||+|++|+.+|++++.|+
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~-~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~ 91 (447)
T COG0160 13 APGPKALELIERREEALARSYGRF-RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT 91 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccc-cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcc
Confidence 456788889999999888875542 5699999999999999999999999999999999999999999999999999988
Q ss_pred ccccCC-hHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcc-
Q 011669 135 TVLYLN-HAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK- 211 (480)
Q Consensus 135 ~~~~~~-~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~- 211 (480)
...+.+ +...+++|+|.+.+|. .++.++|+|||+||||+|||+||.+|++..||+|.++|||+|.+++++|+....+
T Consensus 92 ~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 92 HTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred cCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccc
Confidence 776665 9999999999999997 6899999999999999999999999999999999999999999999999865433
Q ss_pred cccc--CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
..+. ..++.++|+|++||++|..+. ....+.+++.+.. ..+.++|+||+||+||+||.+++|++||++|+++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 2223 256999999999999987432 2334556665543 2356899999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHH
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa 363 (480)
|+|||++||+||||+|||||| ++|+++++|+.|||+||||++|+|+|+|+|++++++++ .....+.+||+|||++|++
T Consensus 252 ~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aa 329 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAA 329 (447)
T ss_pred HHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHH
Confidence 999999999999999999999 99999999999999999999999999999999999999 7778899999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCcee
Q 011669 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLV 443 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 443 (480)
++|+|++++++++.+++.+++++++++|.++.++|+.+++|||.|+|+++++++++.++.|+......+.+.|+++|+++
T Consensus 330 a~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil 409 (447)
T COG0160 330 ALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLL 409 (447)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred eccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 444 GKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 444 ~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+|.++++|||.||+++|++++|+++++|++++++
T Consensus 410 ~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 410 LTCGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred eccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999875
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-90 Score=666.04 Aligned_cols=389 Identities=38% Similarity=0.643 Sum_probs=361.3
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 138 (480)
.++...+...+|+.+. |.+.|+.+++|+|+|+||.+||+||||.+|+++++||||||++++|+++|+++++|.++.|
T Consensus 5 ~~~~~~~~~~~~~~~~---Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~ 81 (404)
T COG4992 5 LTAATIELFMKYLMPT---YGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF 81 (404)
T ss_pred cHHHHHHHHHHhhhcc---cCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc
Confidence 4556677777777665 5567899999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC---CceEEEEcCCcccccccccccccCCCcccccc
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG---CNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~---~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
.++...+|+++|++..| ..++|||+|||+||||+|||+||++++ +.+||.|.++|||+|++++++++++.|+..+.
T Consensus 82 ~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 82 YNEPQAELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred CChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 99999999999999998 789999999999999999999999987 77999999999999999999999998876653
Q ss_pred C--CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 216 Q--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 216 ~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
+ +|+.++|+. | ++.++++++ +++++||+|||||+||+++++++||+++++||++||++||+
T Consensus 161 Pl~~g~~~vpfn---------D----i~al~~ai~----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~ 223 (404)
T COG4992 161 PLLPGFRHVPFN---------D----IEALEAAID----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLIL 223 (404)
T ss_pred CCCCCceecCCC---------C----HHHHHHHhc----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEE
Confidence 3 678777653 4 688999986 38999999999999999999999999999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~ 373 (480)
||||||+|||| ++|+++++++.|||+|++|++|||+|+|++++++++++.+....|++||+|||++|+++.++|+++.+
T Consensus 224 DEVQtG~GRTG-k~fA~e~~gV~PDI~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~ 302 (404)
T COG4992 224 DEVQTGLGRTG-KLFAYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE 302 (404)
T ss_pred eccccCCCccc-hHHHHHHhCCCCCEEEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc
Confidence 99999999999 89999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEE
Q 011669 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVF 453 (480)
Q Consensus 374 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 453 (480)
+++.+++++++++++++|+++..+++.+.++||+|+|+++++..+. ....+.+.|.++||++.+.+ .+++
T Consensus 303 e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--------~a~~~~~~~~~~gvL~~~a~--~~Vi 372 (404)
T COG4992 303 EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--------RARDIVRALREEGVLVLPAG--PNVI 372 (404)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc--------cHHHHHHHHHHCCeEEecCC--CCeE
Confidence 9999999999999999999999999999999999999999996532 25678999999999998876 6799
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 454 RITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 454 Ri~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
||.||+++|++|||+++++|+++++.
T Consensus 373 R~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 373 RFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred EecCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999874
No 4
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-78 Score=597.96 Aligned_cols=411 Identities=35% Similarity=0.543 Sum_probs=362.9
Q ss_pred HHHhhhcCCccccc--c-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCC
Q 011669 65 AKRKTFLSPSLFHL--Y-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLN 140 (480)
Q Consensus 65 ~~~~~~~~~~~~~~--~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~ 140 (480)
+.+.+|+++..... + ..|++|++|+|.||||.|||+|||.++|+|+++.||+||++.+|+++|++++.|... .+.+
T Consensus 7 ~~d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~ 86 (449)
T COG0161 7 AADLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTH 86 (449)
T ss_pred hhhhhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCC
Confidence 33667776544322 2 228999999999999999999999999999999999999999999999999988744 4557
Q ss_pred hHHHHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCcc-c
Q 011669 141 HAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWK-F 212 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~-~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~-~ 212 (480)
....+|+++|++..| +++++|||++|||||||.|||+++.| ++|.++|+.+++|||.+.+++++++..... .
T Consensus 87 ~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~ 166 (449)
T COG0161 87 EPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHA 166 (449)
T ss_pred chHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhh
Confidence 779999999999999 66999999999999999999999987 246679999999999999999999843322 2
Q ss_pred c--ccCCCeeEecCCCCcCCCCCCC-hH---HHHHHHHHHHHccCCCceEEEEEcccCCC-CcceeCCCChHHHHHHHHH
Q 011669 213 N--VVQTGVHHALNPDPYRGVFGAD-GE---MYAKDVQDLIDFGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIK 285 (480)
Q Consensus 213 ~--~~~~g~~~~~~p~~~~~~~~~d-~~---~~~~~le~~i~~~~~~~~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~ 285 (480)
. ....++.+++.|..|+.+...+ .+ .++++||++|..++++++||||+||+++. ||+++||++||++++++|+
T Consensus 167 ~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ 246 (449)
T COG0161 167 FYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICD 246 (449)
T ss_pred hccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHH
Confidence 2 2346788899998887766332 22 66889999999887789999999997777 9999999999999999999
Q ss_pred HhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-----CccccCCCcHH
Q 011669 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFNTFGGNPV 359 (480)
Q Consensus 286 ~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-----~~~~t~~~~~~ 359 (480)
||||+||+|||.||||||| ++|+++++|+.|||+|+||++++| +|+|++++++++.+.+... .|+.||++||+
T Consensus 247 ky~ILlI~DEV~tGFGRTG-~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPl 325 (449)
T COG0161 247 KYGILLIADEVATGFGRTG-KMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPL 325 (449)
T ss_pred HcCcEEEeecceeCCCcCc-hhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHH
Confidence 9999999999999999999 899999999999999999999999 7999999999999988664 48899999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHH-HHHHHHHHHHH
Q 011669 360 CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKA-ETLYIMDKMKE 438 (480)
Q Consensus 360 ~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~-~~~~~~~~l~~ 438 (480)
+|++|+++|++++++++.+++++++.+|.++|+++...+|.++++|+.|++.++|++.+..++.|... ....+.+.+++
T Consensus 326 acAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e 405 (449)
T COG0161 326 ACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALE 405 (449)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999997667799999999999999999999887766533 34678888999
Q ss_pred cCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 439 MGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 439 ~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|++++|. ++.+-++||+++|++|||++++++.+++++
T Consensus 406 ~Gl~iRp~---g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 406 RGLLIRPL---GDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred CCeEEeec---CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 99999987 478999999999999999999999998864
No 5
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-77 Score=612.63 Aligned_cols=415 Identities=30% Similarity=0.478 Sum_probs=355.9
Q ss_pred HHHHHHHhhhcCCccccc--c--CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 011669 61 DEILAKRKTFLSPSLFHL--Y--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 136 (480)
.+++++.+++.......+ . ..|+++++|+|+||||+|||+||||.+|++++++||+||+|++|+++|++++.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 83 (459)
T PRK05965 4 NSLIELDRAHLIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG 83 (459)
T ss_pred HHHHHhhhhccccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc
Confidence 345665555544332211 1 247899999999999999999999999999999999999999999999999876544
Q ss_pred --ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCC
Q 011669 137 --LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (480)
Q Consensus 137 --~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 208 (480)
.+.++...+|+++|++.+|.++++|+|++|||||||.|||+||.| ++|.+||+++++|||++.+++++++.+
T Consensus 84 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~ 163 (459)
T PRK05965 84 YFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALP 163 (459)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCc
Confidence 356888999999999999877899999999999999999999998 457899999999999999999998866
Q ss_pred Ccccccc--CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHH
Q 011669 209 NWKFNVV--QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 209 ~~~~~~~--~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 282 (480)
.++.... ..++..++.|.++++++++|. ..++++++++++...++++++||+||+|+++|.+++|++||++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~ 243 (459)
T PRK05965 164 AFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMRE 243 (459)
T ss_pred hhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHH
Confidence 5544322 245667777877887776553 2345678888875545689999999999999999999999999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-------CCccccC
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTF 354 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-------~~~~~t~ 354 (480)
+|++||++||+|||||||||+| ++|+++++|+.|||+|+||+++|| +|+|++++++++++.+.. ..|++||
T Consensus 244 lc~~~gillI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~ 322 (459)
T PRK05965 244 ACRELGILFVADEVITGFGRTG-PLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTY 322 (459)
T ss_pred HHHHcCCEEEEechhccCccCc-hhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCC
Confidence 9999999999999999999999 899999999999999999999999 599999999999988753 2478999
Q ss_pred CCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCC---CHHHHHH
Q 011669 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP---AKAETLY 431 (480)
Q Consensus 355 ~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~---~~~~~~~ 431 (480)
++||++|++++++|++++++++.+++++++++++++|+++. +++.+.++||.|+|++++++.+..++.+ .......
T Consensus 323 ~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~ 401 (459)
T PRK05965 323 SAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADR 401 (459)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHH
Confidence 99999999999999999999999999999999999999985 5899999999999999999865433333 1224567
Q ss_pred HHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 432 ~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.+.|+++||++.+.+ .+++|+.||+++|++||++++++|++++++
T Consensus 402 i~~~~~~~Gll~~~~g--~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 402 IFDRAYANGLVFRAFG--DGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred HHHHHHhCCeEEEecC--CcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 8889999999998754 478999999999999999999999999875
No 6
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=9.9e-77 Score=610.43 Aligned_cols=420 Identities=32% Similarity=0.537 Sum_probs=363.0
Q ss_pred CHHHHHHHHhhhcCCcccccc-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~ 137 (480)
+++++++++++++.+....+. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~ 85 (451)
T PRK07678 6 QTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLT 85 (451)
T ss_pred CHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccc
Confidence 567788877777655433233 2489999999999999999999999999999999999999999999999998765555
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcc
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 211 (480)
+.++...+|+++|++.+|.. ++|+|+||||||||.|||+||.++ +|.+||.++++|||++.+++++++.+.++
T Consensus 86 ~~~~~~~~lae~l~~~~~~~-~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGE-YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccc
Confidence 67889999999999999864 689999999999999999999986 57899999999999999999998876554
Q ss_pred cccc--CCCeeEecCCCCcCCCCCCC----hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHH
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~ 285 (480)
..+. .+++..++.|+.++.+|+.+ ...+++.++++++...++++||||+||+|+++|.++|+++||++|+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 4332 26888888888888776422 12345667888864345689999999999999999999999999999999
Q ss_pred HhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC------CccccCCCcH
Q 011669 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFGGNP 358 (480)
Q Consensus 286 ~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~------~~~~t~~~~~ 358 (480)
+||++||+|||||||||+| ++|+++++|+.|||+|+||+++|| +|+|++++++++++.+... .|++||++||
T Consensus 245 ~~g~llI~DEV~tGfGRtG-~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp 323 (451)
T PRK07678 245 KHGALLISDEVICGFGRTG-KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNP 323 (451)
T ss_pred HcCCEEEEeehhhcCCcCc-hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCH
Confidence 9999999999999999999 799999999999999999999999 6999999999999888642 4789999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCC-CHHHHHHHHHHHH
Q 011669 359 VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP-AKAETLYIMDKMK 437 (480)
Q Consensus 359 ~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~l~ 437 (480)
++|++++++|++++++++.+++++++++|+++|+++.++++.+.+++|.|+|++++++.+.....| +......++..|+
T Consensus 324 ~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~ 403 (451)
T PRK07678 324 AACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK 403 (451)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888999999999999999999865433333 3345677889999
Q ss_pred HcCceeeccCc----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 438 EMGVLVGKGGF----YGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 438 ~~Gv~v~~~~~----~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
++||++.+.+. .++.+||+||+++|++|||+++++|+++++++
T Consensus 404 ~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 404 EKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred HCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 99999976432 24789999999999999999999999998764
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-76 Score=606.77 Aligned_cols=420 Identities=30% Similarity=0.465 Sum_probs=357.9
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc---CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhc
Q 011669 58 PSADEILAKRKTFLSPSLFH---LY---SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI 131 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~---~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~ 131 (480)
.+++++.++.++++++.... +. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~ 82 (461)
T PRK07482 3 QKIDELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKEL 82 (461)
T ss_pred ccHHHHHHhhhhhccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhc
Confidence 45677777666665443321 11 2389999999999999999999999999999999999999999999999998
Q ss_pred cccc--cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccc
Q 011669 132 QHST--VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMG 203 (480)
Q Consensus 132 ~~~~--~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~ 203 (480)
.|.. ..+.++...+|+++|++..|.++++|+|+||||||||.|||+||.++ +|.+||+++++|||++.++++
T Consensus 83 ~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s 162 (461)
T PRK07482 83 AYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGS 162 (461)
T ss_pred CccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhh
Confidence 6543 24678999999999999998778999999999999999999999773 578999999999999999999
Q ss_pred cccCCCcccccc--CCCeeEecCCCCcCCCCCC-Ch----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCCh
Q 011669 204 ATAQSNWKFNVV--QTGVHHALNPDPYRGVFGA-DG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGY 276 (480)
Q Consensus 204 ~~~~~~~~~~~~--~~g~~~~~~p~~~~~~~~~-d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~ 276 (480)
+++.+.++..+. ..++.+++.|..+++++.. .. ..+++.+++++++..+++++|||+||+||++|+++++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~y 242 (461)
T PRK07482 163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGY 242 (461)
T ss_pred ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHH
Confidence 998765554432 3577777777776655421 11 2246778888864445689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcC-------C
Q 011669 277 LPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR-------R 348 (480)
Q Consensus 277 l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~-------~ 348 (480)
+++|+++|++||++||+|||||||||+| .+|+++++|+.||++|+||+++||+ |+|++++++++++.+.. .
T Consensus 243 l~~lr~lc~~~giLlI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~ 321 (461)
T PRK07482 243 WPAIQAVLKKYDILLIADEVVTGFGRLG-SMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI 321 (461)
T ss_pred HHHHHHHHHHhCCEEEEeccccCCCcCc-chhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCcc
Confidence 9999999999999999999999999999 8999999999999999999999995 99999999999987752 2
Q ss_pred CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCH--
Q 011669 349 NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK-- 426 (480)
Q Consensus 349 ~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~-- 426 (480)
.|++||++||++|++++++|++++++++.+++++++++++++|+++.++++.+.++||.|+|++++++.+...+.|..
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~ 401 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPA 401 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChh
Confidence 477999999999999999999999999999999999999999999999999999999999999999986543333311
Q ss_pred -HHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 427 -AETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 427 -~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.....+...|+++||++.+.. .++.+||.||+++|++|||+++++|++++++
T Consensus 402 ~~~~~~i~~~~~~~Gvl~~~~~-~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 402 LKIGPQVSAAALERGVIARAMP-HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred hHHHHHHHHHHHHCCcEEecCC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 234678889999999986532 2578999999999999999999999999864
No 8
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-75 Score=600.87 Aligned_cols=418 Identities=29% Similarity=0.481 Sum_probs=354.3
Q ss_pred CHHHHHHHHhhhcCCccccc-cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-cccc
Q 011669 59 SADEILAKRKTFLSPSLFHL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTV 136 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~ 136 (480)
+..+++++..++..... .+ ...|+++++|+|+||||.|||+||||++|++++++||+||+|++|+++|+++.. +...
T Consensus 23 ~~~~~~~~~~~~~~~~~-~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~ 101 (464)
T PRK06938 23 SNSPLLERQSRRESNAR-SYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL 101 (464)
T ss_pred cHHHHHHHHHhhhhhcc-ccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc
Confidence 44577777665532211 11 245899999999999999999999999999999999999999999999997643 3233
Q ss_pred ccCChHHHHHHHHHHHhCCCCC---CEEEEe-CCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 137 LYLNHAIADFAEALASKMPGNL---KVVFFT-NSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~---~~v~f~-~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
.+.++...+|+++|.+.+|.++ ++++|+ ||||||||.|||+||.+++|.+||+++++|||++.+++++++...++.
T Consensus 102 ~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~ 181 (464)
T PRK06938 102 DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKK 181 (464)
T ss_pred ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccc
Confidence 4678999999999999998654 367665 899999999999999999999999999999999999999987654443
Q ss_pred ccc--CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHH
Q 011669 213 NVV--QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284 (480)
Q Consensus 213 ~~~--~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 284 (480)
... .+++..+++|+.++++++... ..+++.++++++.. ..+++++||+||+|+++|.++||++||++|+++|
T Consensus 182 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc 261 (464)
T PRK06938 182 PLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRIT 261 (464)
T ss_pred cCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 322 246778888887777765332 22466788888642 1247999999999999999999999999999999
Q ss_pred HHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHH
Q 011669 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAG 364 (480)
Q Consensus 285 ~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa 364 (480)
++||+++|+|||||||||+| .+|+++++|+.|||+|+||+++||+|+|++++++++ +.+....+++||++||++|+++
T Consensus 262 ~~~giLlI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa 339 (464)
T PRK06938 262 EEAGIPLIVDEIQSGFGRTG-KMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAG 339 (464)
T ss_pred HHcCCEEEEeccccCCCcCc-HHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999 899999999999999999999999999999999885 6666566889999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC-----CC-CHHHHHHHHHHHHH
Q 011669 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TP-AKAETLYIMDKMKE 438 (480)
Q Consensus 365 ~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~~-~~~~~~~~~~~l~~ 438 (480)
+++|++++++++.+++++++++++++|+++.++++.+.++||.|+|++++++.+..+. .+ .......+.+.|++
T Consensus 340 ~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (464)
T PRK06938 340 SATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR 419 (464)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999997653221 11 22345678889999
Q ss_pred cCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 439 MGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 439 ~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|+++.+++..++++||.||+++|++|+|+++++|++++.+
T Consensus 420 ~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 420 RGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred CCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 99999876655789999999999999999999999999865
No 9
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-76 Score=603.11 Aligned_cols=416 Identities=32% Similarity=0.512 Sum_probs=359.3
Q ss_pred HHHHHHHHhhhcCCccccc-cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 011669 60 ADEILAKRKTFLSPSLFHL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 138 (480)
+.+.++...+++.+..... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|....+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~ 92 (451)
T PRK06062 13 GARAYALDRAHVFHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAH 92 (451)
T ss_pred hHHHHHhhhhhccccccccccCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCcc
Confidence 4456666556654443321 235899999999999999999999999999999999999999999999999987766667
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc-CC
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV-QT 217 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~-~~ 217 (480)
.++...+|+++|++..|.++++|+|+||||||||.|||+||.+++|.+||+++++|||++.+++++++.+.++...+ ..
T Consensus 93 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~ 172 (451)
T PRK06062 93 ANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRA 172 (451)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCC
Confidence 89999999999999998778999999999999999999999999999999999999999999999987654332222 25
Q ss_pred CeeEecCCCCcCCCCC--CCh---HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 218 GVHHALNPDPYRGVFG--ADG---EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~--~d~---~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
++..++.|++++++|. +|. ..++++++++++...++++++||+||+|+++|.++|+++||++|+++|++||++||
T Consensus 173 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI 252 (451)
T PRK06062 173 GVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLI 252 (451)
T ss_pred CCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 7788888888887774 232 22467788888654446899999999999999999999999999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcCC--CccccCCCcHHHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~a~L~ 369 (480)
+|||||||||+| .+|+++++|+.||++||||+++||+ |+|++++++++++.+... .+++||++||++|++++++|+
T Consensus 253 ~DEV~tGfGRtG-~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 253 ADEVMAGFGRTG-KWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATIN 331 (451)
T ss_pred eeccccCCCcCc-HHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999 7899999999999999999999995 999999999999988643 477899999999999999999
Q ss_pred HhhhhHHHHHHHHHH-HHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC------HHHHHHHHHHHHHcCce
Q 011669 370 VIQKDKLQNNAHVVG-SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA------KAETLYIMDKMKEMGVL 442 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~-~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~------~~~~~~~~~~l~~~Gv~ 442 (480)
+++++++.+++++++ ++++++|+++.++++.+.+++|.|+|+++++..+..++.|. ......+.+.|+++||+
T Consensus 332 ~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl 411 (451)
T PRK06062 332 AMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLL 411 (451)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcE
Confidence 999999999999999 69999999999889999999999999999997543322221 12356788899999999
Q ss_pred eeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 443 VGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 443 v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.+. ++.+||+||+++|++|||+++++|++++++
T Consensus 412 ~~~~---~~~lrl~ppl~~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 412 PFVN---GNRIHVVPPCTVTEDEVREGLAILDAALAV 445 (451)
T ss_pred Eeec---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 8753 478999999999999999999999999875
No 10
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-75 Score=599.14 Aligned_cols=419 Identities=34% Similarity=0.523 Sum_probs=357.1
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
++.+++.+++++..+++.+.... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|.
T Consensus 14 ~~~~~s~~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~ 91 (443)
T PRK06058 14 IPGPKSQALAERRAAAVAAGVGS--TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHT 91 (443)
T ss_pred CCCccHHHHHHHHHHhhcccccc--CCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCc
Confidence 44567778888777776554322 3489999999999999999999999999999999999999999999999987654
Q ss_pred cc-ccCChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccc
Q 011669 135 TV-LYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (480)
Q Consensus 135 ~~-~~~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~ 211 (480)
.. .+.++...+++++|++.+|.. .++++|++||||||+.|+|+||.++++++||+++++|||++.+++++++.. .++
T Consensus 92 ~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~ 171 (443)
T PRK06058 92 CFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYK 171 (443)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccc
Confidence 43 346788999999999999854 468999999999999999999999999999999999999999999988642 233
Q ss_pred cccc--CCCeeEecCCCCcCCCCC--CChHH----HHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFG--ADGEM----YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~--~d~~~----~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
..+. ..++..+++|.+++.+.. .+.+. +.+.+++.+ .++++++||+||+|+++|.++|+++||++|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~l 248 (443)
T PRK06058 172 SGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEW 248 (443)
T ss_pred cccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 3221 245666666666654321 11112 122333333 246899999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHH
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa 363 (480)
|++||+++|+|||||||||+| .+|+++++|+.||++|+||+++||+|+|++++++++++.+....+++||++||++|++
T Consensus 249 c~~~gillI~DEV~tGfgRtG-~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aa 327 (443)
T PRK06058 249 CRENGVVFIADEVQTGFARTG-AWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAA 327 (443)
T ss_pred HHHcCCEEEEeccccCCCcCh-hhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999 7889999999999999999999999999999999999988877788999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCcee
Q 011669 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLV 443 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 443 (480)
++++|+.++++++.+++++++++++++|+++.++++.+.+++|.|+|++++++.+. +..++......+.+.|+++||++
T Consensus 328 a~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~~ 406 (443)
T PRK06058 328 ALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPG-TTEPDAELTKALAAAAHAAGVIV 406 (443)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCC-CCCCcHHHHHHHHHHHHHCCeEE
Confidence 99999999999999999999999999999998889999999999999999998653 22344455677888999999999
Q ss_pred eccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 444 GKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 444 ~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
.+++.+++++||.||+++|+++||+++++|+++++++
T Consensus 407 ~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 407 LTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred eccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 9877667899999999999999999999999999764
No 11
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-75 Score=599.73 Aligned_cols=396 Identities=33% Similarity=0.586 Sum_probs=348.2
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc--ccCChHHHHHHHHHHHhCC-CC
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV--LYLNHAIADFAEALASKMP-GN 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~l~e~L~~~~~-~~ 157 (480)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|... .+.++...+++++|++.+| .+
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999999999999999999999876543 3578999999999999984 55
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCCCcC
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYR 229 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~~~~ 229 (480)
+++|+|++|||||||.|||+||.++ +|.+||.++++|||++.+++++++.+.++..+. .+++..++.|+.++
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 7899999999999999999999985 678999999999999999999987665543322 26788888888888
Q ss_pred CCCC-CChH----HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC
Q 011669 230 GVFG-ADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (480)
Q Consensus 230 ~~~~-~d~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G 304 (480)
++|+ .|.+ .+.+.+|+++....+++++|||+||+|+++|.++++++|+++|+++|++||+++|+|||||||||+|
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG 263 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc
Confidence 8886 2432 2345567777644456899999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-------CccccCCCcHHHHHHHHHHHHHhhhhHH
Q 011669 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKL 376 (480)
Q Consensus 305 ~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-------~~~~t~~~~~~~~aaa~a~L~~i~~~~~ 376 (480)
.+|+++++++.|||+|+||+++|| +|+|++++++++++.+... .|++||++||++|++++++|++++++++
T Consensus 264 -~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l 342 (449)
T PRK07481 264 -SWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDL 342 (449)
T ss_pred -hhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 899999999999999999999999 5999999999999988532 4789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHHHHHHHHHcCceeeccCcCCCEE
Q 011669 377 QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKEMGVLVGKGGFYGNVF 453 (480)
Q Consensus 377 ~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 453 (480)
.+++++++++++++|+++.++++.+.++||.|+|++++++.+..++.+. ......+.+.|+++||++.+.+ +.+
T Consensus 343 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g---~~i 419 (449)
T PRK07481 343 PANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG---TKI 419 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC---CEE
Confidence 9999999999999999999889999999999999999997654333332 2345678889999999998764 569
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 454 RITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 454 Ri~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
||+||+++|++|||+++++|+++++++
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998763
No 12
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-75 Score=597.45 Aligned_cols=419 Identities=32% Similarity=0.504 Sum_probs=359.9
Q ss_pred CCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc
Q 011669 56 DGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST 135 (480)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 135 (480)
+++++.+++++..+++.+... ....|+++++|+|+||||.|||+||||.+|+++.++||+||+|.+|+++|++++.|..
T Consensus 11 ~~~~s~~~~~~~~~~~~~~~~-~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~ 89 (457)
T PRK05639 11 PGPKAKELIEREKRVLSPGIG-VKLFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSM 89 (457)
T ss_pred CCCCHHHHHHHHHHhhccccC-cCCCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccc
Confidence 456778888877777655432 1234899999999999999999999999999999999999999999999999986654
Q ss_pred cc-cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccccc
Q 011669 136 VL-YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFN 213 (480)
Q Consensus 136 ~~-~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~ 213 (480)
.. +.++...+|+++|++.+|.+.++|+|+||||||||.|||+||.++++.+||.++++|||++.+++++++.. .++..
T Consensus 90 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 169 (457)
T PRK05639 90 IGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRG 169 (457)
T ss_pred cCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccC
Confidence 43 34688899999999999877789999999999999999999999999999999999999999999887642 23332
Q ss_pred cc--CCCeeEecCCCCcCCCCCC----ChH----HHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHH
Q 011669 214 VV--QTGVHHALNPDPYRGVFGA----DGE----MYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVY 281 (480)
Q Consensus 214 ~~--~~g~~~~~~p~~~~~~~~~----d~~----~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 281 (480)
+. .+++..+++|+.++.+|.. +.+ .+++.+++++.. ..++++|+||+||+|+++|.++||++|+++|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~ 249 (457)
T PRK05639 170 FSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELK 249 (457)
T ss_pred CCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHH
Confidence 22 2577888888888766642 222 234556666532 13568999999999999999999999999999
Q ss_pred HHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHH
Q 011669 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCT 361 (480)
Q Consensus 282 ~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~ 361 (480)
++|++||+++|+|||||||||+| .+|+++++|+.||+++|||+++||+|+|++++++++++ +....+.+|+++||++|
T Consensus 250 ~lc~~~g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~-~~~~~~~~T~~g~p~~~ 327 (457)
T PRK05639 250 KLLDEHGILLVMDEVQTGIGRTG-KWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMD-LTSGSALLTPAANPVIS 327 (457)
T ss_pred HHHHHcCCEEEEechhhccCcCc-hHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHh-hcCCCcccCCCcCHHHH
Confidence 99999999999999999999999 78899999999999999999999999999999999998 43445678999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCc
Q 011669 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 362 aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 441 (480)
++++++|++++++++.+++++++++|+++|+++.++++.+.++||.|+|+++++..+.. .++......+.+.|+++|+
T Consensus 328 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~--~~~~~~~~~~~~~~~~~Gv 405 (457)
T PRK05639 328 AAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG--KPDPELTGKICWRAFELGL 405 (457)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC--CCCHHHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999998999999999999999999975432 2344456778899999999
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+.+..++.+||.||+++|++|+|+++++|++++++
T Consensus 406 ~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 406 ILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred EEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 99876555689999999999999999999999998864
No 13
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-75 Score=596.13 Aligned_cols=399 Identities=32% Similarity=0.520 Sum_probs=346.1
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.+... .+.++...+|+++|++.+|.++
T Consensus 11 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 90 (443)
T PRK07483 11 ATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGL 90 (443)
T ss_pred CCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 458999999999999999999999999999999999999999999999998865433 3668999999999999998778
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCCCcCC
Q 011669 159 KVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRG 230 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~~~~~ 230 (480)
++|+|+||||||||.|||+||.+ ++|.+||.|+++|||++.+++++++.+.++.... .+++.+++.|..|++
T Consensus 91 ~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE 170 (443)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccc
Confidence 89999999999999999999998 6788999999999999999999988654443322 246677777766766
Q ss_pred CCCC-C----hHHHHHHHHHHHHccCCCceEEEEEcccCC-CCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC
Q 011669 231 VFGA-D----GEMYAKDVQDLIDFGTSGHVAGFLSESIQG-VGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (480)
Q Consensus 231 ~~~~-d----~~~~~~~le~~i~~~~~~~~a~vi~epi~~-~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G 304 (480)
.+.. + ...+++++++++....++++++||+||+|+ .+|.++++++||++|+++|+|||+++|+|||||||||+|
T Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG 250 (443)
T PRK07483 171 QRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250 (443)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc
Confidence 5321 1 122456777766544456899999999998 589999999999999999999999999999999999999
Q ss_pred CCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcCC----CccccCCCcHHHHHHHHHHHHHhhhhHHHHH
Q 011669 305 SHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379 (480)
Q Consensus 305 ~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~~----~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~ 379 (480)
++|+++++++.|||+|+||+++||+ |+|++++++++++.+... .|++||++||++|++++++|++++++++.++
T Consensus 251 -~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~ 329 (443)
T PRK07483 251 -TLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLAN 329 (443)
T ss_pred -HHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 8999999999999999999999996 999999999999888643 4779999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHHHHHHHHHcCceeeccC-----cCCC
Q 011669 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKEMGVLVGKGG-----FYGN 451 (480)
Q Consensus 380 ~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~-----~~~~ 451 (480)
+++++++|+++|+++.++++.+.++||.|+|++++++.+..++.|. ......+.+.|+++||++.+.+ ..++
T Consensus 330 ~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~ 409 (443)
T PRK07483 330 VRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCC
Confidence 9999999999999998889999999999999999998654333331 2235678899999999997653 2357
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 452 VFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 452 ~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++||.||+++|++|||+++++|+++|++
T Consensus 410 ~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 410 HVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875
No 14
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-75 Score=596.69 Aligned_cols=418 Identities=33% Similarity=0.530 Sum_probs=352.8
Q ss_pred CHHHHHHHHhhhcCCccccc-cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc-ccc
Q 011669 59 SADEILAKRKTFLSPSLFHL-YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STV 136 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~ 136 (480)
+..+++++..++... ...+ .+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+.+..+ .+.
T Consensus 18 ~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~ 96 (459)
T PRK06931 18 TNETYLARQAEFESN-VRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL 96 (459)
T ss_pred chHHHHHHHHhhhhh-ccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc
Confidence 344677766655322 1112 1458999999999999999999999999999999999999999999999987432 223
Q ss_pred ccCChHHHHHHHHHHHhCCCCC---CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 137 LYLNHAIADFAEALASKMPGNL---KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~---~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
.+.++...+|+++|++.+|... ..+||+||||||||.|||+||.+++|.+||.++++|||++.+++++++...++..
T Consensus 97 ~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~ 176 (459)
T PRK06931 97 DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNA 176 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccC
Confidence 4668889999999999998532 3557779999999999999999999999999999999999999999876655433
Q ss_pred cc--CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHH
Q 011669 214 VV--QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (480)
Q Consensus 214 ~~--~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~ 285 (480)
+. .+++..+++|+.++++|+... +.+.+.+++.++. ...+++++||+||+|+++|+++++++||++|+++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 177 VNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 32 368888999999998886322 2222334555542 124579999999999999999999999999999999
Q ss_pred HhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHH
Q 011669 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGH 365 (480)
Q Consensus 286 ~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~ 365 (480)
+||+++|+|||||||||+| .+|+++++|+.|||+|+||+++||+|+|++++++++ +.+....+++||++||++|++++
T Consensus 257 ~~g~LlI~DEV~tGfGRtG-~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaal 334 (459)
T PRK06931 257 KHGILLIVDEVQAGFARTG-KMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGL 334 (459)
T ss_pred HcCCEEEEecchhcCCcCc-hHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999 899999999999999999999999999999988775 76766678899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC-----CC-CHHHHHHHHHHHHHc
Q 011669 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TP-AKAETLYIMDKMKEM 439 (480)
Q Consensus 366 a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~~-~~~~~~~~~~~l~~~ 439 (480)
++|++++++++.+++++++++++++|+++.++++.+.++||.|+|+++++++++.++ .+ +......+.+.|+++
T Consensus 335 a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (459)
T PRK06931 335 TTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN 414 (459)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999999999999999997653221 11 233456788899999
Q ss_pred CceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 440 GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 440 Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
||++.+.+..++++||.||+++|++|||+++++|++++++
T Consensus 415 Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 415 GLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 9999876655789999999999999999999999999865
No 15
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.1e-74 Score=592.09 Aligned_cols=416 Identities=25% Similarity=0.409 Sum_probs=354.4
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc-C-CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc
Q 011669 58 PSADEILAKRKTFLSPSLFH---LY-S-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~-~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~ 132 (480)
++++++.+...++++..... ++ . .|+.+++|+|+||||.|||+||||++|++++++||+||+|.+|+.+|++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~ 97 (472)
T PRK08742 18 QTAEHWRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELE 97 (472)
T ss_pred CcHHHHHHhhhcccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 45667777766665433222 11 1 2578999999999999999999999999999999999999999999999876
Q ss_pred cccc-ccCChHHHHHHHHHHHhCCC-----CCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCccccccc
Q 011669 133 HSTV-LYLNHAIADFAEALASKMPG-----NLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAG 200 (480)
Q Consensus 133 ~~~~-~~~~~~~~~l~e~L~~~~~~-----~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~ 200 (480)
|... .+.++...+|+++|++.+|. ++++|+|+||||||||.|||+||.+ ++|.+||+++++|||++.+
T Consensus 98 ~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~g 177 (472)
T PRK08742 98 QVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIG 177 (472)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchh
Confidence 6543 46788999999999999875 4679999999999999999999998 5688999999999999999
Q ss_pred ccccccCCCccccccC--CCeeEecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCC
Q 011669 201 TMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELA 273 (480)
Q Consensus 201 ~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~ 273 (480)
++++++.+.++..+.+ .++.++++|+.++++++...+ .+++.++++++.. ++++++||+|| +||++|++++|
T Consensus 178 als~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 178 ALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS-PGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC-CCceEEEEEccccccCCCcccCC
Confidence 9999886655543322 567888888888776654322 2456777777643 46899999999 69999999999
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcC-----
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR----- 347 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~----- 347 (480)
++|+++|+++|++||++||+|||||||||+| .+|+++++|+.|||+|+||+++||+ |+|++++++++++.+..
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG-~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~ 335 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTG-TLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRER 335 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccC
Confidence 9999999999999999999999999999999 8999999999999999999999995 99999999999987742
Q ss_pred -CCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC-
Q 011669 348 -RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA- 425 (480)
Q Consensus 348 -~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~- 425 (480)
..|++||++||++|++++++|++++++++.++++++++++++.++.+ ++++.+.++||.|+|++++++.+..++.|.
T Consensus 336 ~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~ 414 (472)
T PRK08742 336 AFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKRTPFP 414 (472)
T ss_pred ccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCccccccCC
Confidence 24789999999999999999999999999999999999999877765 568999999999999999998765443331
Q ss_pred --HHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 426 --KAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 426 --~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
......+.+.|+++||++.+.+ ++|||.||+++|++|||+++++|++++++
T Consensus 415 ~~~~~~~~~~~~~~~~Gll~~~~g---~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 415 PAARVGLHAYRAALARGVVLRPLG---DVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred chhHHHHHHHHHHHHCCeEEEecC---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1234668888999999998753 79999999999999999999999999875
No 16
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=5.4e-75 Score=592.42 Aligned_cols=395 Identities=32% Similarity=0.530 Sum_probs=340.2
Q ss_pred HHHHHHHHhhhcCCccccccCC---------CeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHh
Q 011669 60 ADEILAKRKTFLSPSLFHLYSK---------PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~ 130 (480)
..++++++++++.+.. .++.. ++++++++|+||||.|||+||||.+|++++++||+||+|++|+.+|+++
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~ 106 (442)
T TIGR03372 28 NQEVIECFKEHVNPGF-LEYRKSVTAGGDYGAVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK 106 (442)
T ss_pred cHHHHHHHhhccCHHH-HHHHHhhhccCCCCeeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh
Confidence 3466777666665543 11211 3345777789999999999999999999999999999999999999999
Q ss_pred ccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc---CCceEEEEcCCcccccccccccccC
Q 011669 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---GCNDIISLRNAYHGNAAGTMGATAQ 207 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~---~~~~ii~~~~~yhG~~~~~~~~~~~ 207 (480)
+.+.+..+.++...+|+|+|++.+|.++++++|+||||||||.|+|+||.++ ++.+||+++++|||++.+++++++.
T Consensus 107 l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~ 186 (442)
T TIGR03372 107 QPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAK 186 (442)
T ss_pred CCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCC
Confidence 8776655668999999999999999878899999999999999999999996 7889999999999999999999886
Q ss_pred CCcccccc--CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 208 SNWKFNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 208 ~~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
+.++.... .+++.++++|+ .+.+++.++. ...+++++||+||+|+++|.++||++||++|+++
T Consensus 187 ~~~~~~~~p~~~~~~~~p~~d-------------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~l 253 (442)
T TIGR03372 187 PAFRKPFMPLLPGFHHVAFGD-------------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRAL 253 (442)
T ss_pred cccCCCCCCCCCCCEEeCCCC-------------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHH
Confidence 65543322 24666666543 2344444432 1245899999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC--CCccccCCCcHHH
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVC 360 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~--~~~~~t~~~~~~~ 360 (480)
|++||+++|+|||||||||+| .+|+++++|+.|||+||||++||| +|+|++++++++++.+.. ..+++||++||++
T Consensus 254 c~~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~ 332 (442)
T TIGR03372 254 CDEFGALLILDEVQTGMGRTG-KMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLA 332 (442)
T ss_pred HHHcCCEEEEeecccCCCccc-cchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHH
Confidence 999999999999999999999 799999999999999999999999 699999999999988843 3578999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc
Q 011669 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM 439 (480)
Q Consensus 361 ~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 439 (480)
|++++++|++++++++.+++++++++++++|+++..+++ .+.++||.|+|+++++.++ .....+.+.|+++
T Consensus 333 ~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--------~~~~~i~~~l~~~ 404 (442)
T TIGR03372 333 CAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN--------EIGYAFAKELFQQ 404 (442)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh--------HHHHHHHHHHHHC
Confidence 999999999999999999999999999999999998897 7899999999999999653 2346788999999
Q ss_pred CceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 440 GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 440 Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
||++.+.+..++.+||.||+++|++|+|+++++|++++
T Consensus 405 Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 405 NILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 99998765456899999999999999999999999864
No 17
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.7e-74 Score=588.62 Aligned_cols=410 Identities=25% Similarity=0.391 Sum_probs=350.1
Q ss_pred HHHHHHHhhhcCCcccc---cc-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 011669 61 DEILAKRKTFLSPSLFH---LY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 136 (480)
+++.+..++++++.... +. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.|...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 91 (453)
T PRK06943 12 DDWVARSLRAVWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML 91 (453)
T ss_pred hhHHHHhhcccccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 45666656664333221 12 248999999999999999999999999999999999999999999999999876544
Q ss_pred -ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCC
Q 011669 137 -LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 137 -~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
.+.++...+|+++|++..|..+++|+|+||||||||.|||+||.+ ++|.+||+++++|||++.+++++++...
T Consensus 92 ~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~ 171 (453)
T PRK06943 92 AGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVAL 171 (453)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChh
Confidence 467899999999999999876789999999999999999999765 4688999999999999999999998765
Q ss_pred ccccccC--CCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHH
Q 011669 210 WKFNVVQ--TGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 210 ~~~~~~~--~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~ 282 (480)
++..+.+ .++..+++|+.++.++.... ..++++++++++.. ++++++||+|| +||++|++++|++||++|++
T Consensus 172 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~ 250 (453)
T PRK06943 172 FKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER-AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA 250 (453)
T ss_pred hhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC-CCceEEEEEeccccccCCcccCCHHHHHHHHH
Confidence 5544332 46667777776665554321 22456778788643 56899999999 59999999999999999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC------CCccccCC
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR------RNYFNTFG 355 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~------~~~~~t~~ 355 (480)
+|++||++||+|||||||||+| .+|+++++|+.|||+|+||+++|| +|+|++++++++++.+.. ..+++||+
T Consensus 251 lc~~~gillI~DEV~TG~GRtG-~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~ 329 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGRTG-TFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329 (453)
T ss_pred HHHHcCCEEEeechhhCCCCCc-chhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCC
Confidence 9999999999999999999999 899999999999999999999999 599999999999988753 13789999
Q ss_pred CcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHH
Q 011669 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK 435 (480)
Q Consensus 356 ~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 435 (480)
+||++|++++++|++++++++.+++++++++++++|+++. +++.+.++||.|+|++++++.+. .+.......+.+.
T Consensus 330 gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~---~~~~~~~~~i~~~ 405 (453)
T PRK06943 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDG---DAARTFSRRFFEA 405 (453)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCC---CcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999985 57888999999999999997542 1222345678889
Q ss_pred HHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 436 MKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 436 l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
|+++||++.+.+ +.+||+||+++|++|||+++++|++++++
T Consensus 406 ~~~~Gll~~~~g---~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 406 ALERELLLRPIG---TTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred HHHCCcEEEecC---CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 999999998754 67999999999999999999999999875
No 18
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9e-74 Score=589.36 Aligned_cols=417 Identities=29% Similarity=0.474 Sum_probs=358.7
Q ss_pred CCHHHHHHHHhhhcCCccc--ccc--CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc
Q 011669 58 PSADEILAKRKTFLSPSLF--HLY--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH 133 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~--~~~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~ 133 (480)
-++.++.++++++++.... ..+ ..|+++++|+|+||||.|||+||||++|++++++||+||+|++|+.+|++++.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~ 90 (460)
T PRK06916 11 YTYEELSEKNKAYVWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH 90 (460)
T ss_pred CChHHHHHHHhhccccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence 3456788877777654332 112 458999999999999999999999999999999999999999999999999876
Q ss_pred ccc-ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCccccccccccccc
Q 011669 134 STV-LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATA 206 (480)
Q Consensus 134 ~~~-~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~ 206 (480)
... .+.++...+|+++|++.+|.++++|+|+||||||||.|||+||.+ ++|.+||.++++|||++.+++++++
T Consensus 91 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~ 170 (460)
T PRK06916 91 STLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGA 170 (460)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccC
Confidence 544 467899999999999999877789999999999999999999985 6789999999999999999999998
Q ss_pred CCCccccccC--CCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHH
Q 011669 207 QSNWKFNVVQ--TGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPA 279 (480)
Q Consensus 207 ~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~ 279 (480)
.+.++..+.+ .++..+++|+.++++++.+. +.+++.++++++.. ++++++||+|| +|+++|+++++++||++
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~iAAvi~EP~iqg~gG~~~~~~~fl~~ 249 (460)
T PRK06916 171 IDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK-HEEIAAIIVEPLVQGAGGMITMPKGYLKG 249 (460)
T ss_pred CcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC-CCcEEEEEEeccccCCCCcccCCHHHHHH
Confidence 6655543322 56777888887877665432 23456778888643 46899999999 79999999999999999
Q ss_pred HHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-------CCcc
Q 011669 280 VYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYF 351 (480)
Q Consensus 280 l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-------~~~~ 351 (480)
|+++|++||+++|+|||||||||+| .+|+++++|+.|||+|+||+++|| +|+|++++++++++.+.. ..++
T Consensus 250 lr~lc~~~g~llI~DEV~TG~GRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~ 328 (460)
T PRK06916 250 LRNLCTKYNVLFITDEVATGFGRTG-KMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHG 328 (460)
T ss_pred HHHHHHHcCCEEEeechhhCCCcCc-hhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccC
Confidence 9999999999999999999999999 899999999999999999999999 599999999999987742 2467
Q ss_pred ccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCH---HH
Q 011669 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK---AE 428 (480)
Q Consensus 352 ~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~---~~ 428 (480)
+||++||++|++++++|++++++++.++++++++++++.|+++.+ ++.+.++||.|+|++++++.+..++.+.. ..
T Consensus 329 ~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~ 407 (460)
T PRK06916 329 HSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKETKEPFEWTERV 407 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeecccccccCCCchhhH
Confidence 899999999999999999999999999999999999999999964 88899999999999999987654443321 23
Q ss_pred HHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
...+.+.|+++||++.+.+ +.+||.||+++|++|||+++++|+++++++
T Consensus 408 ~~~i~~~~~~~Gvl~~~~g---~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 408 GVQVCKRSRELGMLTRPLG---NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HHHHHHHHHHCCeEEEecC---CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4578889999999998753 789999999999999999999999998753
No 19
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.1e-74 Score=589.04 Aligned_cols=392 Identities=26% Similarity=0.436 Sum_probs=344.3
Q ss_pred CeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCCCE
Q 011669 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLKV 160 (480)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~~~ 160 (480)
|+.+++|+|+||||.|||+||||.+|+++.++||+||+|.+|+++|++++.|... .+.++...+|+++|++.+|.++++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 4789999999999999999999999999999999999999999999999876554 567899999999999999877889
Q ss_pred EEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCC
Q 011669 161 VFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVF 232 (480)
Q Consensus 161 v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~ 232 (480)
|+|+||||||||.|||+||.+ +++.+||+++++|||++.+++++++.+.++..+.+ .++..+++|+.+++++
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999987 56889999999999999999999886655443322 4677788888777766
Q ss_pred CCChH----HHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCc
Q 011669 233 GADGE----MYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307 (480)
Q Consensus 233 ~~d~~----~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~ 307 (480)
+.... .++++++++++.. ++++++||+|| +|+++|.++++++|+++|+++|++||+++|+|||||||||+| .+
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~~-~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG-~~ 267 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAEH-HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG-TM 267 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHhC-CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc-cc
Confidence 54322 2356678888643 56899999999 799999999999999999999999999999999999999999 89
Q ss_pred ccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-------CCccccCCCcHHHHHHHHHHHHHhhhhHHHHH
Q 011669 308 WGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379 (480)
Q Consensus 308 ~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~ 379 (480)
|+++++|+.|||+||||+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|++++++++.++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~ 347 (466)
T PRK07030 268 FACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIEN 347 (466)
T ss_pred hHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999999 599999999999988742 24789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHHHHHHHHHcCceeeccCcCCCEEEEe
Q 011669 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKEMGVLVGKGGFYGNVFRIT 456 (480)
Q Consensus 380 ~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~ 456 (480)
+++++++++++|+++. +++.+.++||.|+|++++++.+..++.|. ......+.+.|+++||++.+.+ +.+||.
T Consensus 348 ~~~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g---~~i~~~ 423 (466)
T PRK07030 348 NRALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG---SVVYFL 423 (466)
T ss_pred HHHHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC---CEEEEE
Confidence 9999999999999985 68899999999999999998654433332 1224568889999999998753 689999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhh
Q 011669 457 PPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 457 p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
||+++|++||++++++|++++++
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 424 PPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 20
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-73 Score=586.62 Aligned_cols=416 Identities=26% Similarity=0.457 Sum_probs=354.3
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
+++|+++++++...++....... .+.|+++++|+|+||||.|||+||||+ |.+++++||+||+|++|+.+|++++.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~a~G~~l~D~dG~~ylD~~-g~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 106 (459)
T PRK06082 29 MNDERTQALLKRDSEVFLHQAMS-TPCLDVLASAEGIYIEDVDGKKYMDFH-GNNVHQLGYGHPHVIEKVKEQMAKLPFS 106 (459)
T ss_pred CCCcchHHHHHHHHHHhcccccC-CCCCceEEeeeeeEEEECCCCEEEEcc-cHhhcccCCCCHHHHHHHHHHHHhCCCc
Confidence 34455666665444443222111 234799999999999999999999997 4588999999999999999999998776
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
...+.++...+|+++|++.+|..+++++|++||+||||.|+|+||.++++.+||+++++|||++.+++++++.+.++..+
T Consensus 107 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~ 186 (459)
T PRK06082 107 PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGM 186 (459)
T ss_pred cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCC
Confidence 55677999999999999999876789999999999999999999999999999999999999999999998866555333
Q ss_pred c--CCCeeEecCCCCcCCCCCCCh---HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 215 V--QTGVHHALNPDPYRGVFGADG---EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 215 ~--~~g~~~~~~p~~~~~~~~~d~---~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
. .+++..++.|+.++++|++.. ..+++.++++++. .+++++||+||+||++ .++++++||++|+++|++||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~ 263 (459)
T PRK06082 187 GPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNV 263 (459)
T ss_pred CCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCC
Confidence 2 267888888888888775321 2345678888864 3489999999999985 667899999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-CccccCCCcHHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-NYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-~~~~t~~~~~~~~aaa~a~ 367 (480)
++|+|||||||||+| .+|+++++|+.||++|+||+++|| +|+|++++++++++.+... .+ +||++||++|++++++
T Consensus 264 llI~DEV~tG~GRtG-~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~-~T~~gnpl~~aaa~a~ 341 (459)
T PRK06082 264 LLIIDEIPNGMGRTG-EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGH-YTHEKSPLGCAAALAT 341 (459)
T ss_pred EEEEechhhCCCccc-hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCC-CCCCcCHHHHHHHHHH
Confidence 999999999999999 899999999999999999999999 5999999999988655322 24 7999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG 447 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 447 (480)
|++++++++.+++++++++|+++|+++.++++.+.++||.|+|++++++.+..++.+.......+...|+++||++.+.+
T Consensus 342 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~ 421 (459)
T PRK06082 342 IEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ 421 (459)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC
Confidence 99999889999999999999999999999999999999999999999986544444444456678889999999998753
Q ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 448 FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 448 ~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++++||+||+++|++|||+++++|++++.+
T Consensus 422 --~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 422 --GNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred --CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999865
No 21
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-73 Score=634.10 Aligned_cols=417 Identities=46% Similarity=0.747 Sum_probs=366.7
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 138 (480)
+..++++++++++.+....+|+.|+++++|+|+||||+|||+||||.+|+ .++||+||+|++|+.+|++++.+ ...+
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~-~~~~ 660 (1013)
T PRK06148 584 DKAEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNT-NTRY 660 (1013)
T ss_pred CHHHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCC-cCCc
Confidence 34566777888888877666788999999999999999999999999985 78999999999999999998733 2357
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc-c--
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV-V-- 215 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~-~-- 215 (480)
.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+||+.+||+++++|||++.+++++++.. ++... +
T Consensus 661 ~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~ 739 (1013)
T PRK06148 661 LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGR 739 (1013)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCC
Confidence 7999999999999999977899999999999999999999999999999999999999999999987632 22221 1
Q ss_pred CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 216 QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
..++..++.|+.++++|+.+. ..+.++++++++. ..++++|+||+||+||++|.+++|++||++|+++|++||+
T Consensus 740 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~ 819 (1013)
T PRK06148 740 PDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGG 819 (1013)
T ss_pred CCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 245667778888888886321 2345567766652 2246899999999999999999999999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCC-ccccCCCcHHHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN-YFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~-~~~t~~~~~~~~aaa~a~L 368 (480)
++|+|||||||||+|..+|+++++|+.|||+||||++|||+|+|++++++++++.+.... +++||++||++|++++++|
T Consensus 820 llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L 899 (1013)
T PRK06148 820 VCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVL 899 (1013)
T ss_pred EEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHH
Confidence 999999999999999448999999999999999999999999999999999999887653 7899999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 448 (480)
++++++++.+++++++++|+++|+++.++++.+++++|.|+|++++++.+..++.|+......+.+.|+++||++.+.+.
T Consensus 900 ~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~ 979 (1013)
T PRK06148 900 DIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP 979 (1013)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC
Confidence 99999999999999999999999999999999999999999999999876655556656677899999999999998776
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.++++||.||+++|+++||+++++|++++++
T Consensus 980 ~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 980 HDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred CCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 7799999999999999999999999999875
No 22
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-73 Score=587.75 Aligned_cols=413 Identities=31% Similarity=0.501 Sum_probs=352.1
Q ss_pred HHHHHHhhhcCCccccc--c--CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 011669 62 EILAKRKTFLSPSLFHL--Y--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~ 137 (480)
++++..++++++..... + ..|+++++|+|+||||+|||+||||++|++++++||+||+|++|+.+|++++.|.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~ 89 (466)
T PRK07036 10 ALAQADKRHLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF 89 (466)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc
Confidence 44455556654443221 1 2489999999999999999999999999999999999999999999999997665432
Q ss_pred --cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCC
Q 011669 138 --YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 138 --~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
+.++...+|+++|++..|.++++|+|+||||||||.|||+||.+ ++|.+||.++++|||++.+++++++.+.
T Consensus 90 ~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~ 169 (466)
T PRK07036 90 GDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAA 169 (466)
T ss_pred cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCc
Confidence 57899999999999999887899999999999999999999988 4578999999999999999999988665
Q ss_pred cccccc--CCCeeEecCCCCcCCCCCCChH----HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 210 WKFNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 210 ~~~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
++..+. ..++.+++.|+.++++++.... .+.+.+++.+....++++|+||+||+|+++|.++|+++|+++|+++
T Consensus 170 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~l 249 (466)
T PRK07036 170 DRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREI 249 (466)
T ss_pred ccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHH
Confidence 544332 2467778888887776653322 2345677777654467899999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCccccc-ccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-------CCccccC
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFE-AHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTF 354 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~-~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-------~~~~~t~ 354 (480)
|+|||+++|+|||||||||+| ++|+++ ++|+.|||+|+||+++|| +|+|++++++++++.+.. ..+++||
T Consensus 250 c~~~g~llI~DEV~tGfGRtG-~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 250 CRRYDILYISDEVVTGFGRLG-HFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred HHHcCCEEEEeechhCCCcCc-hhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCC
Confidence 999999999999999999999 789988 789999999999999999 599999999999998753 2467899
Q ss_pred CCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHH
Q 011669 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLY 431 (480)
Q Consensus 355 ~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~ 431 (480)
++||++|++++++|++++++++.+++++++++|+++|+++ ++++.+.++||.|+|++++|+.+..++.+. ......
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~ 407 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQR 407 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHH
Confidence 9999999999999999999999999999999999999987 568999999999999999998654333332 234567
Q ss_pred HHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 432 ~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.+.|+++||++.+.+ +.+||+||+++|++|||+++++|++++++
T Consensus 408 ~~~~~~~~Gvl~~~~~---~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 408 IDRHCQERGLLVRPLE---HLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred HHHHHHHCCcEEeecC---CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 8889999999998653 68999999999999999999999998864
No 23
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.4e-73 Score=586.67 Aligned_cols=414 Identities=29% Similarity=0.420 Sum_probs=349.2
Q ss_pred HHHHHHHhhhcCCcccc---cc-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 011669 61 DEILAKRKTFLSPSLFH---LY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 136 (480)
.++++...+++.+.... +. ..|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~ 87 (456)
T PRK07480 8 AELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT 87 (456)
T ss_pred HHHHhhhhcccccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 45565555554332221 11 247899999999999999999999999999999999999999999999999866433
Q ss_pred --ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCC
Q 011669 137 --LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (480)
Q Consensus 137 --~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 208 (480)
.+.++...+|+++|++.+|.++++|+|++|||||||.|||+||.+ ++|.+||.++++|||++.+++++++..
T Consensus 88 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~ 167 (456)
T PRK07480 88 FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMK 167 (456)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCCh
Confidence 367899999999999999877889999999999999999999998 467899999999999999999998765
Q ss_pred Ccccccc--CCCeeEecCCCCcCCCCCCChHH----HHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHH
Q 011669 209 NWKFNVV--QTGVHHALNPDPYRGVFGADGEM----YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 209 ~~~~~~~--~~g~~~~~~p~~~~~~~~~d~~~----~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 282 (480)
.++...+ .+++.+++.|..++++++.+... +.+.+++.+....++++++||+||+|+++|++++|++||++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~ 247 (456)
T PRK07480 168 YMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQR 247 (456)
T ss_pred hhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 4443322 35777788888787766433222 24566655544445689999999999999999999999999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhc--C--CCccccCCCc
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLT--R--RNYFNTFGGN 357 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~--~--~~~~~t~~~~ 357 (480)
+|++||++||+|||||||||+| .+|+++++|+.|||+||||+++||+ |+|++++++++++.+. . ..+++||++|
T Consensus 248 lc~~~g~llI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 248 ICRKYDILLVADEVICGFGRTG-EWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred HHHHcCCEEEEechhhCCCcCc-chhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcC
Confidence 9999999999999999999999 8999999999999999999999995 9999999999999883 2 2478999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC--H-HHHHHHH
Q 011669 358 PVCTAAGHAVLKVIQKDKLQNNA-HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA--K-AETLYIM 433 (480)
Q Consensus 358 ~~~~aaa~a~L~~i~~~~~~~~~-~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~--~-~~~~~~~ 433 (480)
|++|++++++|++++++++.+++ ++++++++++|+++ ++++.+.++||.|+|++++++++...+.+. . .....+.
T Consensus 327 pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~ 405 (456)
T PRK07480 327 PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICR 405 (456)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHH
Confidence 99999999999999999999999 69999999999996 578999999999999999998654333221 1 1235677
Q ss_pred HHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 434 DKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 434 ~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.|+++||++.+. ++.+||+||+++|++|||+++++|++++.+
T Consensus 406 ~~~~~~Gll~~~~---~~~l~~~Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 406 DHCFANGLIMRAV---GDRMIISPPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred HHHHHCCcEEeec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 8899999999764 478999999999999999999999999865
No 24
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=3.2e-73 Score=585.31 Aligned_cols=414 Identities=28% Similarity=0.448 Sum_probs=351.3
Q ss_pred HHHHHHHhhhcCCcccc---cc-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 011669 61 DEILAKRKTFLSPSLFH---LY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 136 (480)
.++++++.+++++.... +. ..|+++++|+|+|+||+|||+||||++|++++++||+||+|++|+.+|++++.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 85 (460)
T PRK06105 6 NSLEARDIAYHLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHT 85 (460)
T ss_pred HHHHHhhhhhcccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeec
Confidence 34666666665433321 11 358999999999999999999999999999999999999999999999999765322
Q ss_pred --ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCC
Q 011669 137 --LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS 208 (480)
Q Consensus 137 --~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~ 208 (480)
.+.++...+|+++|++.+|.++++|+|+||||||||+|||+||.+ +++.+||.++++|||++.+++++++.+
T Consensus 86 ~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~ 165 (460)
T PRK06105 86 FSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLP 165 (460)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCc
Confidence 467899999999999999877889999999999999999999876 468899999999999999999998765
Q ss_pred Cccccc--cCCCeeEecCCCCcCCCCC-CC----hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHH
Q 011669 209 NWKFNV--VQTGVHHALNPDPYRGVFG-AD----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVY 281 (480)
Q Consensus 209 ~~~~~~--~~~g~~~~~~p~~~~~~~~-~d----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 281 (480)
.++..+ ...++.++++|+.+++... .. ...+.+++++++....++++++||+||+|+++|.++++++||++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr 245 (460)
T PRK06105 166 NNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQ 245 (460)
T ss_pred ccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 444332 2357778888876654211 11 1224577888886444568999999999999999999999999999
Q ss_pred HHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-------Ccccc
Q 011669 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNT 353 (480)
Q Consensus 282 ~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-------~~~~t 353 (480)
++|++||+++|+|||||||||+| ++|+++++++.|||+|+||+++|| +|+|++++++++++.+... .|.+|
T Consensus 246 ~lc~~~~~llI~DEv~tG~GRtG-~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T 324 (460)
T PRK06105 246 AVLRKYDILLVADEVICGFGRTG-NMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFT 324 (460)
T ss_pred HHHHHcCCeEEEeccccCCCcCc-hhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCC
Confidence 99999999999999999999999 799999999999999999999998 6999999999999887531 36799
Q ss_pred CCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHH
Q 011669 354 FGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETL 430 (480)
Q Consensus 354 ~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~ 430 (480)
|++||++|++++++|++++++++.+++++++++|+++|+++ ++++.+.++||.|+|++++++.+..++.+. .....
T Consensus 325 ~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~ 403 (460)
T PRK06105 325 ASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGA 403 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHH
Confidence 99999999999999999999999999999999999999999 789999999999999999998654333331 22346
Q ss_pred HHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 431 YIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 431 ~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.+.|+++||++.+. ++++||+||+++|++|||+++++|++++++
T Consensus 404 ~i~~~~~~~Gvl~~~~---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 404 RANAAAHEHGVISRAM---GDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred HHHHHHHHCCeEEEec---CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 7888899999999875 379999999999999999999999999865
No 25
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-73 Score=585.64 Aligned_cols=397 Identities=32% Similarity=0.503 Sum_probs=344.1
Q ss_pred HHHHHHHhhhcCCccccc-------cCCCeEEEeeec-cEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc
Q 011669 61 DEILAKRKTFLSPSLFHL-------YSKPLNVVDGKM-QYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-------~~~p~~~~~g~G-~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~ 132 (480)
.+.++.++.++.|....+ ...|+++.+|+| +||||.|||+||||.+|+++.++||+||+|++|+.+|++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~ 115 (459)
T PRK11522 36 REVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP 115 (459)
T ss_pred HHHHHHHHhhcCHHHHHhhhcccccCCCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc
Confidence 456676777776543111 134679999999 999999999999999999999999999999999999999987
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC---CceEEEEcCCcccccccccccccCCC
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG---CNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~---~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
+.+..+.++...+|+++|++.+|.++++|+|+||||||||.|||+||.+++ |.+||.++++|||++.+++++++...
T Consensus 116 ~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~ 195 (459)
T PRK11522 116 LHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKST 195 (459)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcc
Confidence 766566789999999999999998788999999999999999999999985 67899999999999999999988665
Q ss_pred ccccccC--CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHH
Q 011669 210 WKFNVVQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285 (480)
Q Consensus 210 ~~~~~~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~ 285 (480)
++.+..+ +++..++++ | .+++++.++. ..++++++||+||+|+++|.++||++||++|+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~---------d----~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~ 262 (459)
T PRK11522 196 FRKPFMPLLPGFRHVPFG---------N----IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCD 262 (459)
T ss_pred cccCCCCCCCCCcccCCC---------C----HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 5543221 344444332 3 3556666642 123579999999999999999999999999999999
Q ss_pred HhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC--CCccccCCCcHHHHH
Q 011669 286 KAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCTA 362 (480)
Q Consensus 286 ~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~--~~~~~t~~~~~~~~a 362 (480)
+||+++|+|||||||||+| .+|+++++|+.||++||||++||| +|+|++++++++++.+.. ..+++||++||++|+
T Consensus 263 ~~g~llI~DEV~tG~GRtG-~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~A 341 (459)
T PRK11522 263 EFGALLILDEVQTGMGRTG-KMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACA 341 (459)
T ss_pred HcCCEEEeccceecCCccc-hhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHH
Confidence 9999999999999999999 799999999999999999999999 699999999999987743 357899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCc
Q 011669 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 363 aa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 441 (480)
+++++|++++++++.+++++++++|+++|+++.++++ .+.++||.|+|+++++..+ .....+.+.|+++||
T Consensus 342 aala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--------~~~~~i~~~l~~~Gv 413 (459)
T PRK11522 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--------EIGYNFASEMFRQRV 413 (459)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--------hHHHHHHHHHHHCCe
Confidence 9999999999999999999999999999999998897 7899999999999999643 225668899999999
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+.+...+++||.||+++|++|||+++++|++++++
T Consensus 414 l~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 414 LVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred EEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 99876545689999999999999999999999998864
No 26
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-73 Score=577.74 Aligned_cols=411 Identities=31% Similarity=0.478 Sum_probs=354.8
Q ss_pred HHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCC
Q 011669 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLN 140 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~ 140 (480)
.+++....++.++... ..|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++.|... .+.+
T Consensus 5 ~~~~~~~~~~~~~~~~--~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~ 82 (425)
T PRK07495 5 SLTDRRNAAISRGVGM--TTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPY 82 (425)
T ss_pred HHHHHHHhhhccccCc--CCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCC
Confidence 4555554554443221 238999999999999999999999999999999999999999999999999876543 5678
Q ss_pred hHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCccccccC--
Q 011669 141 HAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVVQ-- 216 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~-- 216 (480)
+...+|+++|++.+|.+ .++|+|+||||||||.|||+||.++++.+||+++++|||++.+++++++. ..++..+.+
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK07495 83 ENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMM 162 (425)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCC
Confidence 89999999999999865 37999999999999999999999999999999999999999999988774 234433332
Q ss_pred CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
.++.++++|+.+++ .+.+.++++++++++. ..++++++||+||+|+++|.+++|++|+++|+++|++||+++|+||
T Consensus 163 ~~~~~~~~~~~~~g---~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 239 (425)
T PRK07495 163 PDVYHVPFPVELHG---VSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADE 239 (425)
T ss_pred CCeEEecCCccccc---ccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 57777887766543 1233446677877763 2346899999999999999888999999999999999999999999
Q ss_pred cccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhH
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~ 375 (480)
||+||||+| .+|+++++++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|+++++++
T Consensus 240 v~tG~gr~G-~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~ 318 (425)
T PRK07495 240 VQTGFARTG-KLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED 318 (425)
T ss_pred hhhcCCcCC-CceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence 999999999 6888999999999999999999999999999999999988877788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEE
Q 011669 376 LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRI 455 (480)
Q Consensus 376 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi 455 (480)
+.+++++++++++++|+++.++++.+.+++|.|+|+|+++..+. ...|+......+.+.|+++|+++.+.+..++++||
T Consensus 319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~-~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~ 397 (425)
T PRK07495 319 LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDAD-SGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRF 397 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCC-CCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEE
Confidence 99999999999999999999889999999999999999997543 23344445677889999999999876655789999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 456 TPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 456 ~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.||+++|++++|+++++|++++++
T Consensus 398 ~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 398 LAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875
No 27
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-73 Score=581.71 Aligned_cols=417 Identities=31% Similarity=0.532 Sum_probs=359.6
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-c
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-L 137 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~ 137 (480)
++.+++++.++++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|... .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~ 81 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRI-KYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAY 81 (445)
T ss_pred hHHHHHHHHHHhhcccccc-CCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccc
Confidence 4457777777776554321 2248999999999999999999999999999999999999999999999999876544 3
Q ss_pred cCChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCC-ccccc-
Q 011669 138 YLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN-WKFNV- 214 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~-~~~~~- 214 (480)
+.++...+|+++|++.+|... ++|+|+||||||||.|||+||.++++.+||.++++|||++.+++++++... ++...
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 578999999999999998653 689999999999999999999999999999999999999999999987432 22222
Q ss_pred -cCCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHcc-CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 215 -VQTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 215 -~~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
..+++..+++|+.+++++.... ..++++++++++.. .++++++||+||+|+++|.++++++||++|+++|++||
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g 241 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHG 241 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 2367888898888877664322 22345666666532 24689999999999999999999999999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
+++|+||||+||||+| .+|+++++++.||++|+||++++|+|+|++++++++++.+....+.+|+++||++|++++++|
T Consensus 242 ~llI~DEv~tg~GrtG-~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 320 (445)
T PRK08593 242 ILFAVDDIQQGLGRTG-KWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATI 320 (445)
T ss_pred CEEEEechhhCCCcCc-hHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999 788889999999999999999999999999999999998876667789999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 448 (480)
+.++++++.+++++++++++++|+++.++++.+.++||.|+|+++++..+.....++......+.+.|+++||++.+.+
T Consensus 321 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~- 399 (445)
T PRK08593 321 DMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA- 399 (445)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC-
Confidence 9999999999999999999999999998999999999999999999976543344445556778999999999997643
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+||.||+++|++|||+++++|++++++
T Consensus 400 -~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 400 -GNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred -CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999998865
No 28
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.8e-73 Score=585.80 Aligned_cols=397 Identities=29% Similarity=0.473 Sum_probs=342.3
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCC--
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGN-- 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~-- 157 (480)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+.++.+... .+.++...+|+++|++.+|..
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 48999999999999999999999999999999999999999999999998654433 356889999999999999853
Q ss_pred -CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc--cCCCeeEecCCCCcCCCCCC
Q 011669 158 -LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFGA 234 (480)
Q Consensus 158 -~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~g~~~~~~p~~~~~~~~~ 234 (480)
.+.+||+||||||||.|||+||.+++|.+||+++++|||++.+++++++...++... ..+++..+++|+.++++|+.
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 355667799999999999999999999999999999999999999998754443222 23577788888888887764
Q ss_pred ChH----HHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcc
Q 011669 235 DGE----MYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (480)
Q Consensus 235 d~~----~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~ 308 (480)
+.+ .+.+.+++.++. ...+++++||+||+||++|.+++|++|+++|+++|++||+++|+|||||||||+| .+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG-~~~ 259 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG-TMF 259 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC-chh
Confidence 322 222334555532 1235899999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 011669 309 GFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLK 388 (480)
Q Consensus 309 ~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~ 388 (480)
+++++++.||++|+||++++|+|+|+++++++ ++.+....+.+||++||++|++++++|+.++++++.+++++++++++
T Consensus 260 a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~ 338 (442)
T TIGR00709 260 AFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERIT 338 (442)
T ss_pred HHHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 46665556789999999999999999999999999999999999999
Q ss_pred HHHHHhHHhcCceeeEeccceeEEEEEecCCCcCC------CCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCC
Q 011669 389 ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT------PAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFT 462 (480)
Q Consensus 389 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~------~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t 462 (480)
++|+++.++++.+.++||.|+|++++++++..++. ++......+...|+++||++.+.+..++++||.||+++|
T Consensus 339 ~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it 418 (442)
T TIGR00709 339 SFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITID 418 (442)
T ss_pred HHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCC
Confidence 99999999999999999999999999986533221 122345678889999999998766667899999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011669 463 KEDADYLVDVMDYSLSK 479 (480)
Q Consensus 463 ~~~id~~l~~l~~~l~~ 479 (480)
++|+|+++++|++++.+
T Consensus 419 ~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 419 QEECEEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998864
No 29
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2e-72 Score=578.81 Aligned_cols=419 Identities=31% Similarity=0.491 Sum_probs=358.0
Q ss_pred CHHHHHHHHhhhcCCccccc--c-C-CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 59 SADEILAKRKTFLSPSLFHL--Y-S-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~--~-~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
++.++.+..+++++...... + . .|+++++|+|+||||.|||+||||++|++++++||+||+|++|+.+|++++.|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~ 87 (460)
T PRK06541 8 SDTDLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF 87 (460)
T ss_pred cHHHHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCc
Confidence 45667777677776544332 2 2 478999999999999999999999999999999999999999999999998765
Q ss_pred cc-ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh---c---CCceEEEEcCCcccccccccccccC
Q 011669 135 TV-LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---T---GCNDIISLRNAYHGNAAGTMGATAQ 207 (480)
Q Consensus 135 ~~-~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~---~---~~~~ii~~~~~yhG~~~~~~~~~~~ 207 (480)
.. .+.++...+++++|++..|.++++|+|+||||||||.|||+||.+ + ++.+||.++++|||++.+++++++.
T Consensus 88 ~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~ 167 (460)
T PRK06541 88 PLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGL 167 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCC
Confidence 43 467899999999999999877889999999999999999999998 3 4789999999999999999999886
Q ss_pred CCcccccc--CCCeeEecCCCCcCCC-CCCChH----HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHH
Q 011669 208 SNWKFNVV--QTGVHHALNPDPYRGV-FGADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAV 280 (480)
Q Consensus 208 ~~~~~~~~--~~g~~~~~~p~~~~~~-~~~d~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l 280 (480)
+.++..+. .+|+..++.|+.++++ |+++.+ .+++.++++++...++++++||+||+|+++|.+++|++||++|
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l 247 (460)
T PRK06541 168 PAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERV 247 (460)
T ss_pred hhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 65543322 3688888888888776 655432 2356788888654456899999999999999999999999999
Q ss_pred HHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcCC----CccccCC
Q 011669 281 YKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFG 355 (480)
Q Consensus 281 ~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~~----~~~~t~~ 355 (480)
+++|++||+++|+|||||||||+| .+|+++++++.||++||||++++|+ |+|++++++++++.+... .+.+||+
T Consensus 248 ~~lc~~~g~llI~DEV~tGfGR~G-~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~ 326 (460)
T PRK06541 248 REICDRYDVLLVSDEVICAFGRLG-EMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFG 326 (460)
T ss_pred HHHHHHcCCEEEEechhhCCCcCc-hhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCC
Confidence 999999999999999999999999 7888999999999999999999997 999999999999877532 3568999
Q ss_pred CcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCH------HHH
Q 011669 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK------AET 429 (480)
Q Consensus 356 ~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~------~~~ 429 (480)
+||+++++++++|+.++++++.+++++++++++++|+++.+ ++.+.+++|.|+|++++|+.+..++.|.. ...
T Consensus 327 gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK06541 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLR 405 (460)
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHH
Confidence 99999999999999999889999999999999999999875 88889999999999999986543333311 112
Q ss_pred HHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 430 LYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 430 ~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+.+.|+++||++.+.+...+.+||+||+++|++|||+++++|++++++
T Consensus 406 ~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 406 GFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred HHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 35778899999999875333478999999999999999999999999865
No 30
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-72 Score=578.61 Aligned_cols=396 Identities=31% Similarity=0.489 Sum_probs=343.5
Q ss_pred CeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCCCE
Q 011669 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLKV 160 (480)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~~~ 160 (480)
| ++++|+|+||||+|||+||||++|++++++||+||+|.+|+.+|++++.+... .+.++...+|+++|++.+|..+++
T Consensus 15 p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 93 (447)
T PRK06917 15 P-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNW 93 (447)
T ss_pred C-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 5 59999999999999999999999999999999999999999999998765433 367899999999999999977789
Q ss_pred EEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCCCcCCCC
Q 011669 161 VFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGVF 232 (480)
Q Consensus 161 v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~~~~~~~ 232 (480)
++|+||||||||.|||+||.+ ++|.+||.++++|||++.+++++++...++..+. ..++..++.|..+++++
T Consensus 94 v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (447)
T PRK06917 94 SFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPV 173 (447)
T ss_pred EEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccccc
Confidence 999999999999999999876 6788999999999999999999887654443322 14566677777777666
Q ss_pred CCChH----HHHHHHHHHHHccCCCceEEEEEcccCCC-CcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCc
Q 011669 233 GADGE----MYAKDVQDLIDFGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307 (480)
Q Consensus 233 ~~d~~----~~~~~le~~i~~~~~~~~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~ 307 (480)
+.+.. .+.+.++++++....+++++||+||+|++ ||+++++++|+++|+++|++||+++|+|||||||||+| .+
T Consensus 174 ~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG-~~ 252 (447)
T PRK06917 174 QKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG-AM 252 (447)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc-ch
Confidence 54322 24567788887554468999999999985 67999999999999999999999999999999999999 79
Q ss_pred ccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcCC----CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHH
Q 011669 308 WGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRR----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382 (480)
Q Consensus 308 ~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~~----~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~ 382 (480)
|+++++++.||++||||+++||+ |+|++++++++++.+... .+++||++||++|++++++|++++++++.+++++
T Consensus 253 ~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~ 332 (447)
T PRK06917 253 FAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAE 332 (447)
T ss_pred hhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 99999999999999999999996 999999999999987542 3568999999999999999999998999999999
Q ss_pred HHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHHHHHHHHHcCceeeccC-----cCCCEEE
Q 011669 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKEMGVLVGKGG-----FYGNVFR 454 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~-----~~~~~iR 454 (480)
++++|++.|+++.++++.+.++||.|+|++++|+.+...+.+. ......+.+.|+++||++.+.+ .+++.+|
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~ 412 (447)
T PRK06917 333 KGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVI 412 (447)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEE
Confidence 9999999999999889999999999999999998654433332 2346778889999999998752 2368999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 455 ITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 455 i~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
|+||+++|++|||+++++|++++++
T Consensus 413 l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 413 IAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 31
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=2.7e-72 Score=578.41 Aligned_cols=416 Identities=26% Similarity=0.377 Sum_probs=348.4
Q ss_pred HHHHHHHHhhhcCCcccc--cc--CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc
Q 011669 60 ADEILAKRKTFLSPSLFH--LY--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST 135 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~--~~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 135 (480)
.+++++...++.++.... .+ ..|+++++|+|+||||.|||+||||.+|+++.+|||+||+|++|+++|++++.+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~ 90 (460)
T PRK12403 11 TRDYQAADAAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN 90 (460)
T ss_pred hHHHHHhhhcccccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee
Confidence 355666555554333221 11 24899999999999999999999999999999999999999999999999987654
Q ss_pred cc--cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc---C---CceEEEEcCCcccccccccccccC
Q 011669 136 VL--YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---G---CNDIISLRNAYHGNAAGTMGATAQ 207 (480)
Q Consensus 136 ~~--~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~---~---~~~ii~~~~~yhG~~~~~~~~~~~ 207 (480)
.. +.++...+|+++|++.+|.++++++|+|||||||+.|||+||.++ + +..|+.+.++|||++.+++++++.
T Consensus 91 ~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~ 170 (460)
T PRK12403 91 MFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGM 170 (460)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCC
Confidence 32 457889999999999998777899999999999999999999883 3 456889999999999999999886
Q ss_pred CCcccccc-CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHH
Q 011669 208 SNWKFNVV-QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 208 ~~~~~~~~-~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 282 (480)
..++...+ .+++.+++.|+.|+++++... +.+++++++.+....++++++||+||+|+++|.+.++++||++|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~ 250 (460)
T PRK12403 171 KFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQR 250 (460)
T ss_pred ccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 54443222 256778888887776654322 2234567666644335689999999999999999999999999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCc-cccccccCHHHHHhhcC----CCccccCCCc
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTR----RNYFNTFGGN 357 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~-pig~v~~~~~~~~~l~~----~~~~~t~~~~ 357 (480)
+|++||++||+||||+||||+| .+|+++++|+.|||+|+||+++||+ |+|++++++++++.+.. ..|++||++|
T Consensus 251 lc~~~g~lLI~DEV~tGfGRtG-~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gn 329 (460)
T PRK12403 251 ICRQYDVLLCADEVIGGFGRTG-EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGH 329 (460)
T ss_pred HHHHcCCEEEEeccccCCCcCc-hhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCC
Confidence 9999999999999999999999 8999999999999999999999995 99999999999988753 1367899999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHH-HHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCH---HHHHHHH
Q 011669 358 PVCTAAGHAVLKVIQKDKLQNNAH-VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK---AETLYIM 433 (480)
Q Consensus 358 ~~~~aaa~a~L~~i~~~~~~~~~~-~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~---~~~~~~~ 433 (480)
|++|++++++|++++++++.++++ ++++++++.|+++.++++.+.++||.|+|++++|+.+..++.+.. .....+.
T Consensus 330 Pl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~ 409 (460)
T PRK12403 330 PVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCR 409 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHH
Confidence 999999999999999999999996 999999999999999999999999999999999986543333321 2234566
Q ss_pred HHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 434 DKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 434 ~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.|+++|+++.+.+ +.+||+||+++|++|+|+++++|++++++
T Consensus 410 ~~~~~~Gll~~~~~---~~~~l~Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 410 TIGFEEGVIIRSTL---GRMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred HHHHhCCEEEEecC---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 77899999998643 57999999999999999999999999865
No 32
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-73 Score=523.74 Aligned_cols=393 Identities=29% Similarity=0.514 Sum_probs=345.6
Q ss_pred CCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 011669 58 PSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~ 137 (480)
..+++++++..+|-.++ |.+.|+++++++|+++||.+|++|+||.+++++++.|||||.|.+|+++|.+++..++..
T Consensus 21 ~aS~~~~~~E~k~~ahn---yhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssra 97 (427)
T KOG1402|consen 21 TASQQIMERENKYGAHN---YHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRA 97 (427)
T ss_pred cchhhhhchhhhccccc---CCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHH
Confidence 34566777666765544 667899999999999999999999999999999999999999999999999998777777
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc--------CCceEEEEcCCcccccccccccccCCC
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------GCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~--------~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
+.+....++++.+.++++ .+.|+-+|+|.||+|.|+|+||.+. .+.+|++..++|||++.+++++++.+.
T Consensus 98 fYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 98 FYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred HhhhhHHHHHHHHHHhcC--cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 889999999999999995 5789999999999999999999542 234688899999999999999998662
Q ss_pred -cc-ccccCCC-eeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH
Q 011669 210 -WK-FNVVQTG-VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (480)
Q Consensus 210 -~~-~~~~~~g-~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~ 286 (480)
|. +....++ +..+++. | +++|+.+++. +++++||+|||||++|+++||++||+++++||+|
T Consensus 176 s~~~fgp~~P~~~~~v~Y~---------d----~eale~~l~~---~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPYG---------D----AEALEVALKS---PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred hhhccCCCCCCcceeeccC---------C----HHHHHHHhcC---CCeeEEEeeccccccceEeCCchhHHHHHHHHHh
Confidence 22 2222245 4444432 3 6889998874 6999999999999999999999999999999999
Q ss_pred hCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHH
Q 011669 287 AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGH 365 (480)
Q Consensus 287 ~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~ 365 (480)
|++++|.||||||+|||| ++|++++.++.||++.++|+++|| +|+++++.++++|..+.++.|++||++||++|+++.
T Consensus 240 ynvl~I~DEvQTGl~RTG-k~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vai 318 (427)
T KOG1402|consen 240 YNVLLIADEVQTGLARTG-KLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAI 318 (427)
T ss_pred hcEEEEehhhhhcccccC-cEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHH
Confidence 999999999999999999 899999999999999999999999 799999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceee
Q 011669 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVG 444 (480)
Q Consensus 366 a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~ 444 (480)
|+|+++.++++.++.+.+|..++.+|.++..++| .+..|||+|++.++++...+. ....+..++-.|+++|++..
T Consensus 319 Aalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~----~~~~aw~~cl~lk~~g~LAk 394 (427)
T KOG1402|consen 319 AALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT----SGQDAWDVCLALKENGLLAK 394 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc----cchhHHHHHHcccccccccC
Confidence 9999999999999999999999999999988885 578999999999999965432 12345667888899999988
Q ss_pred ccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 445 KGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 445 ~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
|. +++.|||.||++++++|+++.+++|++++.
T Consensus 395 pt--H~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 395 PT--HGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CC--CCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 75 378999999999999999999999998864
No 33
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.7e-72 Score=582.93 Aligned_cols=394 Identities=27% Similarity=0.480 Sum_probs=340.0
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc--ccCChHHHHHHHHHHHhC-CCC
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV--LYLNHAIADFAEALASKM-PGN 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~l~e~L~~~~-~~~ 157 (480)
.|+++++|+|+|+||+|||+||||.+|+++.+|||+||+|++|+++|++++.+... .+.++...+|+++|.+.+ +.+
T Consensus 71 ~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 150 (504)
T PLN02760 71 EPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK 150 (504)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC
Confidence 58999999999999999999999999999999999999999999999999765433 356888999999999985 455
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcccc--ccCCCeeEecCCCCcC
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFN--VVQTGVHHALNPDPYR 229 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~--~~~~g~~~~~~p~~~~ 229 (480)
+++|+|+|||+|||+.|||+||.|+ ++.+||.++++|||++.+++++++.+.++.. .+..++.++++|+.++
T Consensus 151 ~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~ 230 (504)
T PLN02760 151 MGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWR 230 (504)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccc
Confidence 7899999999999999999999763 4789999999999999999998886654333 2335677888887776
Q ss_pred CCCCC-Ch----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC
Q 011669 230 GVFGA-DG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (480)
Q Consensus 230 ~~~~~-d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G 304 (480)
+++.. +. ..+.+++++++....++++++||+||+|+++|+++||++|+++|+++|++||++||+|||||||||+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG 310 (504)
T PLN02760 231 FHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG 310 (504)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc
Confidence 53221 11 22346788877543356899999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-------CCccccCCCcHHHHHHHHHHHHHhhhhHH
Q 011669 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-------RNYFNTFGGNPVCTAAGHAVLKVIQKDKL 376 (480)
Q Consensus 305 ~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~a~L~~i~~~~~ 376 (480)
.+|+++++|+.|||+||||+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|++++++++
T Consensus 311 -~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l 389 (504)
T PLN02760 311 -TMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNI 389 (504)
T ss_pred -hhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence 799999999999999999999999 599999999999998753 24789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCC---HHHHHHHHHHHHHcCceeeccCcCCCEE
Q 011669 377 QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA---KAETLYIMDKMKEMGVLVGKGGFYGNVF 453 (480)
Q Consensus 377 ~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~Gv~v~~~~~~~~~i 453 (480)
.+++++++++|+++|+++ .+++++.++||.|+|+++++.++.....+. ......+.+.|+++||++.+.+ +.+
T Consensus 390 ~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g---~~l 465 (504)
T PLN02760 390 PEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG---DNI 465 (504)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC---CEE
Confidence 999999999999999998 678999999999999999998754333322 2235678889999999998753 689
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 454 RITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 454 Ri~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
||+||+++|++|||+++++|++++++
T Consensus 466 rl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 466 MMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998864
No 34
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-72 Score=572.37 Aligned_cols=416 Identities=37% Similarity=0.589 Sum_probs=358.8
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
++.++++++++..++++.+... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|.
T Consensus 12 ~~~~~s~~l~~~~~~~~~~~~~--~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 89 (441)
T PRK05769 12 LPGPKAREIIERDEKYLAQSTR--RWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHY 89 (441)
T ss_pred CCCccHHHHHHHHHHhhCcccc--cCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCc
Confidence 4567888888877777765422 23589999999999999999999999999999999999999999999999998765
Q ss_pred cc-ccCChHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccc
Q 011669 135 TV-LYLNHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (480)
Q Consensus 135 ~~-~~~~~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~ 211 (480)
.. .+.++...+|+++|++..|. .+++|+|+||||||||.|||+||.++++.+||.++++|||++.+++++++.. .++
T Consensus 90 ~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~ 169 (441)
T PRK05769 90 SLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQR 169 (441)
T ss_pred cCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccc
Confidence 43 46688999999999999975 3689999999999999999999999999999999999999999999987642 233
Q ss_pred ccc--cCCCeeEecCCCCcCCCCC-CCh----HHHHHHHHH-HHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHH
Q 011669 212 FNV--VQTGVHHALNPDPYRGVFG-ADG----EMYAKDVQD-LIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 212 ~~~--~~~g~~~~~~p~~~~~~~~-~d~----~~~~~~le~-~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 282 (480)
..+ ...++..+++|+.++++|+ ++. +.+++.+++ +++. ..++++++||+||+++++|.++++++||++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~ 249 (441)
T PRK05769 170 KGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRK 249 (441)
T ss_pred cCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHH
Confidence 222 2368888999988888876 332 223455776 3432 234689999999999999999999999999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHH
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTA 362 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~a 362 (480)
+|++||+++|+||||+||||+| .+|+++++++.||+++|||++++|+|+|++++++++++.+ ...+.+||++||++|+
T Consensus 250 l~~~~g~lli~DEv~tG~gr~G-~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~g~p~~~a 327 (441)
T PRK05769 250 LADKYGILLIDDEVQTGMGRTG-KMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFGGNPVAAA 327 (441)
T ss_pred HHHHcCCEEEEechhhCCCccc-ceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcC-CCCCCCCCCcCHHHHH
Confidence 9999999999999999999999 7888899999999999999999999999999999998643 3467899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCce
Q 011669 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVL 442 (480)
Q Consensus 363 aa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 442 (480)
+++++|+++++ ++.+++++++++|+++|+++.++++.+.+++|.|+|++++++.+. ..++......+.+.|+++||+
T Consensus 328 aa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~Gil 404 (441)
T PRK05769 328 AALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFKRGLL 404 (441)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC--ccccHHHHHHHHHHHHhCCcE
Confidence 99999999988 999999999999999999999889999999999999999997643 223444567788899999999
Q ss_pred eeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 443 VGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 443 v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.+.+ .+.+||+||+++|++|||+++++|++++++
T Consensus 405 ~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 405 LLGAG--KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 97654 478999999999999999999999999875
No 35
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=5.9e-72 Score=576.97 Aligned_cols=422 Identities=32% Similarity=0.531 Sum_probs=363.7
Q ss_pred CCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc
Q 011669 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134 (480)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~ 134 (480)
++.+++.+++++..+++.++... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|.
T Consensus 12 ~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~ 89 (451)
T PRK06918 12 IPGPKAASLLERRQNIVPKGVSN--GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT 89 (451)
T ss_pred CCCCCHHHHHHHHHHhhcccccc--CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc
Confidence 44578889999888887655332 2378999999999999999999999999999999999999999999999998765
Q ss_pred cc-ccCChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCcc
Q 011669 135 TV-LYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWK 211 (480)
Q Consensus 135 ~~-~~~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~ 211 (480)
.. .+.++...+|+++|++.+|... ++|+|+||||||||.|||+||.+++|.+||+++++|||++.+++++++. ..++
T Consensus 90 ~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 169 (451)
T PRK06918 90 GFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYK 169 (451)
T ss_pred cccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCcccc
Confidence 43 4568999999999999998655 6999999999999999999999999999999999999999999998874 2233
Q ss_pred cccc--CCCeeEecCCCCcCCCCCCChH----HHHHHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHH
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 284 (480)
..+. .+++..+++|+.++++.+...+ .+.+.+++++.. ..++++++||+||+|+++|.++++++|+++|+++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~ 249 (451)
T PRK06918 170 FGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNIC 249 (451)
T ss_pred ccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHH
Confidence 3222 2567778888777665432211 223456665532 23568999999999999999999999999999999
Q ss_pred HHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHH
Q 011669 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAG 364 (480)
Q Consensus 285 ~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa 364 (480)
++||+++|+||||+||||+| .+++++.+++.||+++|||++++|+|+||+++++++++.+....+++||++||++|+++
T Consensus 250 ~~~gillI~DEV~tg~gr~g-~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 250 SEHGILFVADEIQTGFARTG-KYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred HHcCCEEEEeccccCcCccC-ceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 99999999999999999999 68888889999999999999999999999999999999887777889999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceee
Q 011669 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVG 444 (480)
Q Consensus 365 ~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~ 444 (480)
+++|+.++++++.+++++++++++++|+++.++++.+.+++|.|+|+++++..+..+..|+......+.+.|+++||++.
T Consensus 329 ~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~ 408 (451)
T PRK06918 329 LAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLL 408 (451)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEe
Confidence 99999998889999999999999999999988888889999999999999975443334555567788889999999999
Q ss_pred ccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 445 KGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 445 ~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+++.+++++||+||+++|+++|++++++|++++++
T Consensus 409 ~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 409 SAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred ecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 88767789999999999999999999999999865
No 36
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=1.3e-73 Score=520.17 Aligned_cols=413 Identities=44% Similarity=0.752 Sum_probs=374.3
Q ss_pred CHHHHHHHHhhhcCCcccccc-CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLY-SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~ 137 (480)
+..+.+.++++++.+....|| ..|+.|+|++|+|++|.+|++|||+.++..-+ |||||+|++|...|+... .++.+
T Consensus 6 SK~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVaHv--ghchp~VV~A~~kQmat~-~tN~R 82 (452)
T KOG1403|consen 6 SKTETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVAHV--GHCHPEVVRAGAKQMATI-STNNR 82 (452)
T ss_pred hhHHHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhhhc--ccCCHHHHHHHHHHHhHh-cccch
Confidence 346789999999998876555 56999999999999999999999999887655 999999999999999876 34567
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC-
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ- 216 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~- 216 (480)
+.+..+.+.++.|...+|. ++.++|+|||||||++||++||.++++.++|..+.+|||.....+-+ ++|++..+.
T Consensus 83 Flhd~lv~cA~~l~stlPe-Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~---SPYKF~~g~~ 158 (452)
T KOG1403|consen 83 FLHDELVQCARTLTSTLPE-LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEV---SPYKFNQGGG 158 (452)
T ss_pred hhHHHHHHHHHHHhhcCCC-ceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeec---cceeccCCCC
Confidence 8899999999999999997 99999999999999999999999999999999999999998888766 456666543
Q ss_pred ---CC-eeEecCCCCcCCCCCCC-------hHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 217 ---TG-VHHALNPDPYRGVFGAD-------GEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 217 ---~g-~~~~~~p~~~~~~~~~d-------~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
++ ++..|.|+.||+.|..+ +..|.++++++++.. ....+|++|.|..|+.||.+.||.+|++.+++.
T Consensus 159 v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~ 238 (452)
T KOG1403|consen 159 VAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADA 238 (452)
T ss_pred cCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHH
Confidence 44 45678999999988642 235778888888642 234799999999999999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC--CCccccCCCcHHHH
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCT 361 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~--~~~~~t~~~~~~~~ 361 (480)
.+.+|.++|.||||.||||.|+++|+++.++..|||+||+|.+|+|.|+++|++++++++.+.. ..+++||+|||++|
T Consensus 239 Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsC 318 (452)
T KOG1403|consen 239 VRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSC 318 (452)
T ss_pred HhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhH
Confidence 9999999999999999999999999999999999999999999999999999999999999876 34789999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cC
Q 011669 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MG 440 (480)
Q Consensus 362 aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~G 440 (480)
|+++++++++++|+++++..+++.+|...|+++..+++.++++||.|+|++++++++..++.|+...+..+...|++ .|
T Consensus 319 Av~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~ 398 (452)
T KOG1403|consen 319 AVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYR 398 (452)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999989889999986 47
Q ss_pred ceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 441 VLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 441 v~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
|++...|+..|.+.|.||+|++++++++++..|+++|.
T Consensus 399 VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 399 VLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred EEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 99999888899999999999999999999999999875
No 37
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-71 Score=566.09 Aligned_cols=417 Identities=33% Similarity=0.485 Sum_probs=359.2
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc-
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL- 137 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~- 137 (480)
++.++++++++++.+.... ...|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~ 80 (443)
T PRK08360 2 KPLEIIERYSKVISPANRV-TYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIY 80 (443)
T ss_pred CHHHHHHHHHHhccccccc-ccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccc
Confidence 3456777777786665321 13489999999999999999999999999999999999999999999999998775543
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccccccc-
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV- 215 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~- 215 (480)
+.++...+|+++|++..|...++|+|+||||||||.|||+||.+++|.+|+.+.++|||++.+++++++.. .++..+.
T Consensus 81 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 160 (443)
T PRK08360 81 GFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE 160 (443)
T ss_pred cCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC
Confidence 45788999999999999877789999999999999999999999999999999999999999999887642 2222211
Q ss_pred CCCeeEecCCCCcCCCCCCCh----HHHHHHHHHHHHcc-CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCE
Q 011669 216 QTGVHHALNPDPYRGVFGADG----EMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~----~~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 290 (480)
.+++.++++|+.++.++..+. ..+.+.++++++.. ..+++++||+||+||++|.+.++++|+++|+++|++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~l 240 (443)
T PRK08360 161 LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGIL 240 (443)
T ss_pred CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 357778888887777664321 12345567777542 2468999999999999999998999999999999999999
Q ss_pred EEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 291 lI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
+|+||||+||||+| .+|+++++++.||++|+||++++|+|+||+++++++++.+....+.+|+++||+++++++++|+.
T Consensus 241 lI~DEv~~g~gr~G-~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 319 (443)
T PRK08360 241 LVVDEVQSGLGRTG-KWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEE 319 (443)
T ss_pred EEEeccccCCCcCc-cchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999 67788888999999999999999999999999999999987766889999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCC
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG 450 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~ 450 (480)
++++++.+++++++++++++|+++.++++.+.+++|.|+|++++|+.+..++.++...+..+...|+++|+++.+.+ +
T Consensus 320 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~ 397 (443)
T PRK08360 320 IEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS--G 397 (443)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC--C
Confidence 98889999999999999999999988899999999999999999987654444544556778899999999987543 5
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 451 NVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 451 ~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.+||+||+++|++|||+++++|++++++
T Consensus 398 ~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 398 NVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999998864
No 38
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-71 Score=563.94 Aligned_cols=411 Identities=32% Similarity=0.453 Sum_probs=352.2
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccC
Q 011669 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYL 139 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~ 139 (480)
.+++++..+++......+ .|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~--~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~ 81 (421)
T PRK06777 4 SELNQRRLEATPRGVGVM--CDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVP 81 (421)
T ss_pred HHHHHHHHHhcccccCcC--CCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccC
Confidence 456666666664443322 38999999999999999999999999999999999999999999999999876533 356
Q ss_pred ChHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Cccccc-c-
Q 011669 140 NHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNV-V- 215 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~-~- 215 (480)
++...+|+++|++..|. +.++++|+||||||||.|||+||.+++|.+||.++++|||++.+++++++.. .++... +
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~ 161 (421)
T PRK06777 82 YASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPF 161 (421)
T ss_pred ChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCC
Confidence 88899999999999873 4679999999999999999999999999999999999999999999988752 243332 1
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
..++.++++|+.+++. ....+++.++++++. ..++++++||+||+|+++|..+++++|+++|+++|++||+++|+|
T Consensus 162 ~~~~~~~~~p~~~~~~---~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK06777 162 PGSIFHALYPNELHGV---SVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD 238 (421)
T ss_pred CCCcEEcCCCccccCc---CHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2456667776544321 223345677887763 235689999999999999998999999999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhh
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~ 374 (480)
|||+||||+| .+|+++++++.||++|+||++++|+|+||+++++++++.+....+.+||++||++|++++++|+.++++
T Consensus 239 Ev~tg~gr~g-~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~ 317 (421)
T PRK06777 239 EVQTGFARTG-KLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEE 317 (421)
T ss_pred chhhCCccCC-chhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999 788888899999999999999999999999999999998887778899999999999999999999889
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEE
Q 011669 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFR 454 (480)
Q Consensus 375 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR 454 (480)
++.+++++++++++++|+++..+++.+.+++|.|+|+++++..+. +..+.......+.+.|+++||++.+++.+++++|
T Consensus 318 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr 396 (421)
T PRK06777 318 KLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQ-TGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIR 396 (421)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCc-cCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEE
Confidence 999999999999999999998888999999999999999986532 1223344566778888999999999877778999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 455 ITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 455 i~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
|.||+++|++++++++++|++++.
T Consensus 397 ~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 397 FLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 39
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-71 Score=567.93 Aligned_cols=417 Identities=38% Similarity=0.560 Sum_probs=358.4
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc-cc
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-VL 137 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~ 137 (480)
.+.+++++..+++.+....++ .|+++++++|+|+||.|||+||||++|+++++|||+||+|.+|+.+|++++.+.. ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~ 82 (433)
T PRK08117 4 TWSDLVERYPQLLAPALAKDH-PNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGV 82 (433)
T ss_pred CHHHHHHHHHHHhhhhccccC-CCceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc
Confidence 345677777776655432222 2489999999999999999999999999999999999999999999999987654 34
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCcccc-cc
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFN-VV 215 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~-~~ 215 (480)
+.++...+|+++|++.+|...++|+|+|||+|||+.|||+||.++++.+||+++++|||++.+++++++. ..++.. .+
T Consensus 83 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 162 (433)
T PRK08117 83 IYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQP 162 (433)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCC
Confidence 6788999999999999977788999999999999999999999999999999999999999999988763 223222 22
Q ss_pred -CCCeeEecCCCCcCCCCCCChH----HHHHHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 216 -QTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 216 -~~g~~~~~~p~~~~~~~~~d~~----~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
..++..+++|+.++++++.+.. .+.+++++++++ ..++++++||+||+|+++|.+.++++||++|+++|+|||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 242 (433)
T PRK08117 163 LLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI 242 (433)
T ss_pred CCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 3678888888877766543221 245677777764 2246899999999999999999999999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
++|+||||+||||+| .+|+++++++.||++||||++++|+|+|++++++++++.+....+++||++||+++++++++|+
T Consensus 243 llI~DEv~tG~gr~G-~~~~~~~~gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 243 LLIFDEVQTGFGRTG-EWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred EEEEecchhccCccc-cchhHhhcCCCCCEeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999 7777788899999999999999999999999999999988776788999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY 449 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 449 (480)
.++++++.+++++++++++++|+++..+++.+.++++.|+|+++++..+. ..++......+.+.|+++||++.+.+..
T Consensus 322 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g~~ 399 (433)
T PRK08117 322 VIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD--GEPDGDAVEKILDKCLEKGLLFYLCGNA 399 (433)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC--CCcchHHHHHHHHHHHHCCCEEeecCCC
Confidence 99888999999999999999999998888988999999999999997643 2234445677889999999999876555
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 450 GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 450 ~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++++||+||+++|+++|++++++|++++++
T Consensus 400 ~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 400 GNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999865
No 40
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=5.5e-71 Score=565.48 Aligned_cols=397 Identities=33% Similarity=0.483 Sum_probs=347.1
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCC-C
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPG-N 157 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~-~ 157 (480)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.++...+++++|++..|. +
T Consensus 14 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 93 (420)
T TIGR00700 14 TLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSG 93 (420)
T ss_pred CCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCC
Confidence 458999999999999999999999999999999999999999999999999876543 35678899999999999984 4
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccccccc--CCCeeEecCCCCcCCCCCC
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRGVFGA 234 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~~g~~~~~~p~~~~~~~~~ 234 (480)
.++|+|++|||||||.|||+||.+++|.+||+++++|||++.+++++++.. .++..+. .+++..+++|++++.++..
T Consensus 94 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
T TIGR00700 94 PKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLD 173 (420)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccc
Confidence 679999999999999999999999999999999999999999999988752 2332221 2567778888777654321
Q ss_pred C---hHHHHHHHHHHHH-ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc
Q 011669 235 D---GEMYAKDVQDLID-FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310 (480)
Q Consensus 235 d---~~~~~~~le~~i~-~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~ 310 (480)
. ...+++.+++++. ...++++++||+||+|+++|.++++++|+++|+++|++||+++|+||||+||||+| .+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g-~~~a~ 252 (420)
T TIGR00700 174 KQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG-AMFAC 252 (420)
T ss_pred cchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc-hhHHH
Confidence 1 1223556777764 22356899999999999999999999999999999999999999999999999999 78888
Q ss_pred cccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 011669 311 EAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER 390 (480)
Q Consensus 311 ~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~ 390 (480)
+++++.||+++|||++++|+|+||+++++++++.+....+.+||++||++|++++++|+.++++++.+++++++++++++
T Consensus 253 ~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 332 (420)
T TIGR00700 253 EHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDR 332 (420)
T ss_pred hhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999988777788999999999999999999999999999999999999999
Q ss_pred HHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHH
Q 011669 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 391 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l 470 (480)
|+++.++++.+..+++.|+|+++++.++ ....|+......+.+.|+++||++.+++.+++++||+||++++++++++++
T Consensus 333 L~~l~~~~~~~~~vrg~G~~~~i~~~~~-~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~ 411 (420)
T TIGR00700 333 LTTLKAVDPRIGDVRGLGAMIAVELVDP-GTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGL 411 (420)
T ss_pred HHHHHhhCCCEEEeeccceEEEEEEecC-CCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHH
Confidence 9999888898999999999999999743 223345555677888899999999998777789999999999999999999
Q ss_pred HHHHHHHh
Q 011669 471 DVMDYSLS 478 (480)
Q Consensus 471 ~~l~~~l~ 478 (480)
++|+++++
T Consensus 412 ~~l~~~l~ 419 (420)
T TIGR00700 412 DILCAILA 419 (420)
T ss_pred HHHHHHhh
Confidence 99999875
No 41
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-71 Score=612.46 Aligned_cols=420 Identities=42% Similarity=0.701 Sum_probs=365.8
Q ss_pred CCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc
Q 011669 57 GPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 136 (480)
.+++.++++++++++.+....+++.|+.+++|+|+|+||.|||+||||++|+ .++||+||+|++|+.+|+.++.+. .
T Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~-~ 619 (972)
T PRK06149 543 PPDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTN-S 619 (972)
T ss_pred CCCHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhcccc-c
Confidence 3677899999988887766566778899999999999999999999999886 479999999999999999987553 3
Q ss_pred ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc---
Q 011669 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN--- 213 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~--- 213 (480)
.+.++...+|+++|++.+|.++++|+|+|||||||+.|||+||.++++.+||+++++|||++.+++++++.......
T Consensus 620 ~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~ 699 (972)
T PRK06149 620 RFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALE 699 (972)
T ss_pred cccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccC
Confidence 45678899999999999997789999999999999999999999999999999999999999999887653211111
Q ss_pred ccCCCeeEecCCCCcCCCCCCC--hHHHHHHHHHHHHc--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 214 VVQTGVHHALNPDPYRGVFGAD--GEMYAKDVQDLIDF--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d--~~~~~~~le~~i~~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
....++..++.|+.++++|+.+ ...+.+++++.++. ...+++++||+||+||++|.+++|++||++|+++|++||+
T Consensus 700 ~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~ 779 (972)
T PRK06149 700 TRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG 779 (972)
T ss_pred CCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1123677788888888888532 23445565555542 1246899999999999999999999999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC-CCccccCCCcHHHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR-RNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~-~~~~~t~~~~~~~~aaa~a~L 368 (480)
++|+|||||||||+|..+|+++++|+.|||+||||++|||+|+|++++++++++.+.. ..+++|+++||++|++++++|
T Consensus 780 llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L 859 (972)
T PRK06149 780 VCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVL 859 (972)
T ss_pred EEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHH
Confidence 9999999999999994478999999999999999999999999999999999998864 345688999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 448 (480)
++++++++.+++++++++++++|+++.++++.+.++||.|+|++++++.+..++.|+......+++.|+++||++.+.+.
T Consensus 860 ~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~ 939 (972)
T PRK06149 860 DVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD 939 (972)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC
Confidence 99999999999999999999999999999999999999999999999876555556556677899999999999998876
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+++||.||+++|+++||+++++|++++.+
T Consensus 940 ~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 940 HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999875
No 42
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=7.9e-71 Score=564.78 Aligned_cols=393 Identities=27% Similarity=0.440 Sum_probs=339.7
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.++...+++++|++.+|.++
T Consensus 27 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~ 106 (442)
T PRK13360 27 KAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGL 106 (442)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCC
Confidence 357999999999999999999999999999999999999999999999998866544 3568999999999999998778
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCC-CcC
Q 011669 159 KVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPD-PYR 229 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~-~~~ 229 (480)
++|+|+||||||||.|+|+||.++ +|.+||+|+++|||++.+++++++...++..+. ..++.+++.+. .++
T Consensus 107 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~ 186 (442)
T PRK13360 107 NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLAR 186 (442)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhc
Confidence 899999999999999999999985 577999999999999999999998665544332 24566666663 355
Q ss_pred CCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC
Q 011669 230 GVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305 (480)
Q Consensus 230 ~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~ 305 (480)
++|..+. ..+.++++++++...++++++||+||+|+++|.+.++++||++|+++|++||+++|+|||||||||+|
T Consensus 187 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG- 265 (442)
T PRK13360 187 NAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 265 (442)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-
Confidence 5554321 23466788888754456899999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-------CccccCCCcHHHHHHHHHHHHHhhhhHHH
Q 011669 306 HFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQ 377 (480)
Q Consensus 306 ~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-------~~~~t~~~~~~~~aaa~a~L~~i~~~~~~ 377 (480)
.+|+++++++.||++||||+++|| +|+|++++++++++.+... .+.+||++||++|++++++|++++++++.
T Consensus 266 ~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~ 345 (442)
T PRK13360 266 APFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLL 345 (442)
T ss_pred cchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 788899999999999999999988 7999999999999877532 36689999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeC
Q 011669 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITP 457 (480)
Q Consensus 378 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 457 (480)
++++++++++++.|+++. +++.+.++||.|++++++++..... + ......+.+.|+++||++.+. ++.+||+|
T Consensus 346 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~~--~-~~~~~~~~~~l~~~Gvl~~~~---~~~lr~~P 418 (442)
T PRK13360 346 TRAARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDGK--P-GKRAYEVFLKCFEKGLMIRYT---GDILALSP 418 (442)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCCC--c-chhHHHHHHHHHHCCcEEEec---CCEEEEeC
Confidence 999999999999999884 4788899999999999999753211 1 123456788899999999765 36899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhC
Q 011669 458 PLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
|+++|++|||+++++|+++++++
T Consensus 419 pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 419 PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 43
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=3.1e-70 Score=558.90 Aligned_cols=410 Identities=29% Similarity=0.424 Sum_probs=350.0
Q ss_pred HHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCC
Q 011669 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLN 140 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~ 140 (480)
++++....+..+.... ..|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+.+|++++.|... .+.+
T Consensus 5 ~~~~~~~~~~~~~~~~--~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~ 82 (421)
T PRK09792 5 EFHQRRLSATPRGVGV--MCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPY 82 (421)
T ss_pred HHHHHHHhhccccccc--CCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCC
Confidence 4555444444333222 237899999999999999999999999999999999999999999999999866533 3568
Q ss_pred hHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Ccccccc--C
Q 011669 141 HAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--Q 216 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~ 216 (480)
+...+|+++|++..|. +.++++|++|||||||.|||+||.++++.+||+++++|||++.+++++++.. .++..+. .
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 162 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP 162 (421)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 8899999999999874 3578999999999999999999999999999999999999999999987742 3333322 2
Q ss_pred CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc-CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
.++..+++|+.+++. +...+++.++++++.. .++++++||+||+|+++|..++|++|+++|+++|++||+++|+||
T Consensus 163 ~~~~~v~~p~~~~~~---~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 239 (421)
T PRK09792 163 GSVYHVPYPSDLHGI---STQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADE 239 (421)
T ss_pred CCcEEcCCCcccccc---cHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 466777777654321 2233467788888642 245899999999999999998999999999999999999999999
Q ss_pred cccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhH
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~ 375 (480)
||+||||+| .+|+++++++.||++||||++++|+|+||+++++++++.+....+.+||++||++|++++++|+++++++
T Consensus 240 v~tg~gr~G-~~~a~~~~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~ 318 (421)
T PRK09792 240 VQSGFARTG-KLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKES 318 (421)
T ss_pred cccCCCCCC-chhHHHhcCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999999999 7888888999999999999999999999999999999988877788999999999999999999999889
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEE
Q 011669 376 LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRI 455 (480)
Q Consensus 376 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi 455 (480)
+.++++++++++++.|+++.++++.+..++|.|+|+|+++.++. ...++......+.+.|+++||++.+.+..++.|||
T Consensus 319 ~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl 397 (421)
T PRK09792 319 LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQ-TGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCc-cCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEE
Confidence 99999999999999999999999999999999999999997432 22333345677899999999999765555789999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHh
Q 011669 456 TPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 456 ~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.||++++++||++++++|+++++
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999885
No 44
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-70 Score=558.74 Aligned_cols=381 Identities=24% Similarity=0.325 Sum_probs=328.8
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCCC
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
.|+++++|+|+||||.|||+||||.+|+++.++||+||+|++|+++|++++.|... .+.++...+|+++|++..|.+++
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 58999999999999999999999999999999999999999999999999876544 35688899999999999987788
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCC-Ccccccc--CCCeeEecCCCCcCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRG 230 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~~g~~~~~~p~~~~~ 230 (480)
+|+|++|||||||.|||+||.++ +|.+||+++++|||.+.+++++++.. .++..+. ..++..++.|.....
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 181 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS 181 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC
Confidence 99999999999999999999985 57889999999999999999998642 2222211 134555655532211
Q ss_pred CCCCChHHHHHHHHHHHHccCCCceEEEEEccc-CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc
Q 011669 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (480)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~ 309 (480)
.+ ++.+.+.+.+++++. +++++||+||+ |+.+|+++++++|+++|+++|++||+++|+|||||||||+| .+|+
T Consensus 182 ~~-~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG-~~~a 255 (422)
T PRK05630 182 SP-QEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG-ELFA 255 (422)
T ss_pred Ch-HHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc-hhhH
Confidence 11 233445566777664 48999999996 99999999999999999999999999999999999999999 8999
Q ss_pred ccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC------CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHH
Q 011669 310 FEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382 (480)
Q Consensus 310 ~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~------~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~ 382 (480)
++++++.|||+||||+++|| +|+|++++++++++.+... .|++||++||++|++++++|++++++++.+++++
T Consensus 256 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~ 335 (422)
T PRK05630 256 TLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKR 335 (422)
T ss_pred HHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 99999999999999999999 5999999999999987532 4689999999999999999999999899999999
Q ss_pred HHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCC
Q 011669 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFT 462 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t 462 (480)
+++++++.|+.+. +++.+.++||.|+|+++++..+. ....+.+.|+++|+++.+.+ +++||.||+++|
T Consensus 336 ~g~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~--------~~~~~~~~~~~~Gl~~~~~g---~~l~~~PpL~it 403 (422)
T PRK05630 336 IEAELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV--------DMEEATQAAVDHGVWLRPFG---RLVYVMPPYITT 403 (422)
T ss_pred HHHHHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc--------cHHHHHHHHHHCCeEEEecC---CEEEEECCccCC
Confidence 9999999999875 47889999999999999995421 13467888999999998753 799999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011669 463 KEDADYLVDVMDYSLSK 479 (480)
Q Consensus 463 ~~~id~~l~~l~~~l~~ 479 (480)
++|||+++++|+++++.
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999864
No 45
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.5e-70 Score=560.45 Aligned_cols=393 Identities=30% Similarity=0.461 Sum_probs=339.2
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
+.|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.|.+. .+.++...+|+++|++.+|.++
T Consensus 30 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~ 109 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGL 109 (445)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999999876554 3668999999999999998778
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCC-CcC
Q 011669 159 KVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPD-PYR 229 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~-~~~ 229 (480)
++|+|+||||||||.|+|+||.++ ++.+||+++++|||++.+++++++.+.++..+. ..++..+++|. .++
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 899999999999999999999885 467899999999999999999988655443322 24566677665 455
Q ss_pred CCCCCCh----HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC
Q 011669 230 GVFGADG----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305 (480)
Q Consensus 230 ~~~~~d~----~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~ 305 (480)
++|.... ..+.++++++++....+++++||+||+|+++|.+.++++||++|+++|++||+++|+|||||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG- 268 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG- 268 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc-
Confidence 5554321 22456788888754446899999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-------CccccCCCcHHHHHHHHHHHHHhhhhHHH
Q 011669 306 HFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQ 377 (480)
Q Consensus 306 ~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-------~~~~t~~~~~~~~aaa~a~L~~i~~~~~~ 377 (480)
.+|+++++++.||++|+||+++|| +|+|++++++++++.+... .+.+||++||+++++++++|++++++++.
T Consensus 269 ~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~ 348 (445)
T PRK09221 269 AAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLF 348 (445)
T ss_pred hhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHH
Confidence 788999999999999999999998 7999999999999887531 36689999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeC
Q 011669 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITP 457 (480)
Q Consensus 378 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 457 (480)
+++++++++++++|+++. +++.+.++||.|+|+++++...... + ......+.+.|+++||++.++ ++.+||+|
T Consensus 349 ~~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~~--~-~~~~~~~~~~~~~~Gv~~~~~---~~~lr~~P 421 (445)
T PRK09221 349 ERAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPGA--P-GARGYEAFMKCFEKGLLVRYT---GDTIALSP 421 (445)
T ss_pred HHHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEeccccc--c-cchHHHHHHHHHHCCeEEeec---CCEEEEEC
Confidence 999999999999999984 5788899999999999999753211 1 123456888999999999765 47899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhC
Q 011669 458 PLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
|+++|++|||+++++|++++.++
T Consensus 422 pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 422 PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CccCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998763
No 46
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=6.4e-70 Score=555.61 Aligned_cols=405 Identities=25% Similarity=0.381 Sum_probs=333.7
Q ss_pred CCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHH--H
Q 011669 51 SPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQ--I 128 (480)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~--~ 128 (480)
-+.+.++|++.+++++..+++... .+..|+.+++|+|+||||.|||+||||++|++++++||+||+|++|+.+| .
T Consensus 13 ~~~~~~~~~s~~l~~~~~~~~~~~---~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~ 89 (464)
T TIGR00699 13 MKTEIPGPKSKAAMKQLNEVFDAR---AVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMA 89 (464)
T ss_pred cccCCCCccHHHHHHHHHhhhccc---CcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHH
Confidence 334566789999999988775332 12458999999999999999999999999999999999999999999985 4
Q ss_pred HhccccccccCChHHHHHHHHHHH----hCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC---------------------
Q 011669 129 KRIQHSTVLYLNHAIADFAEALAS----KMPGNLKVVFFTNSGTEANELAIMMARLYTG--------------------- 183 (480)
Q Consensus 129 ~~~~~~~~~~~~~~~~~l~e~L~~----~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~--------------------- 183 (480)
..+.+.. .+.++...+++++|.+ .+|.++++|+|+||||||||.|||+||.|++
T Consensus 90 ~~l~~~~-~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~ 168 (464)
T TIGR00699 90 TTLINRP-ALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDN 168 (464)
T ss_pred Hhhcccc-cCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccc
Confidence 4444433 3667788889999854 6777788999999999999999999998732
Q ss_pred ------CceEEEEcCCcccccccccccccCCCccc-cccCCCeeEecCCCCcCCCCCC-----C--hHHHHHHHHHHHHc
Q 011669 184 ------CNDIISLRNAYHGNAAGTMGATAQSNWKF-NVVQTGVHHALNPDPYRGVFGA-----D--GEMYAKDVQDLIDF 249 (480)
Q Consensus 184 ------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~-~~~~~g~~~~~~p~~~~~~~~~-----d--~~~~~~~le~~i~~ 249 (480)
+.+||+|.++|||++.+++++++.+.++. ..+..++.++++|+ +++++.. + ...+++.++++++.
T Consensus 169 ~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~ 247 (464)
T TIGR00699 169 QAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKK 247 (464)
T ss_pred cccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHHh
Confidence 23899999999999999999988654332 22234566777765 3433321 1 22356778888874
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCC--cceeeeccccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV--PDIVTMAKGIG 327 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~--pDivt~sK~~g 327 (480)
. .+++++||+||+|+++|.++++++||++|+++|++||++||+|||||||||+| .+|+++++|+. |||+|+||+++
T Consensus 248 ~-~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG-~~fa~e~~gv~~~PDi~t~gK~lg 325 (464)
T TIGR00699 248 W-HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATG-KFWAHEHWNLDDPPDMVTFSKKFQ 325 (464)
T ss_pred c-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCc-chhHHHhcCCCCCCCEEEehhhhc
Confidence 3 45799999999999999999999999999999999999999999999999999 89999999997 99999999996
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEe
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVR 405 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~ 405 (480)
+|+. +.++ .+.......+++||++||++|++++++|+.++++++.+++++++++++++|+++.++++ .+.++|
T Consensus 326 ~gG~~----~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vR 400 (464)
T TIGR00699 326 TAGYF----FHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLR 400 (464)
T ss_pred cCCcc----ccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeec
Confidence 6753 2332 22212234578999999999999999999999999999999999999999999988898 789999
Q ss_pred --ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 406 --GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 406 --g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
|.|+|+++++. +......+.+.|+++|+++.+.+ .+.|||.||+++|++|||+++++|++++
T Consensus 401 g~G~Glm~gie~~--------~~~~~~~i~~~~~~~Gvl~~~~g--~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 401 GKGRGTFIAWDTP--------DEAKRDKLLKKARNNGVNIGGCG--VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ccCeEEEEEEecC--------CHHHHHHHHHHHHHCCcEEecCC--CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999982 22335778899999999998754 4799999999999999999999999864
No 47
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.1e-70 Score=556.21 Aligned_cols=401 Identities=24% Similarity=0.374 Sum_probs=337.8
Q ss_pred HHHHHHhhhcCCccccc-cCCC-eEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-cc
Q 011669 62 EILAKRKTFLSPSLFHL-YSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LY 138 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~-~~~p-~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~ 138 (480)
++++...+++++..... ...| +.+++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~ 84 (429)
T PRK06173 5 ELLELDRQHIWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGF 84 (429)
T ss_pred HHhhhhhcccccccccccccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccccc
Confidence 45555556654432221 1234 469999999999999999999999999999999999999999999999876544 46
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCC-Ccc
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQS-NWK 211 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~ 211 (480)
.++...+|+++|++.+|.++++|+|++|||||||.|||+||.+ ++|.+||+++++|||.+.+++++++.. .++
T Consensus 85 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 164 (429)
T PRK06173 85 THEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMH 164 (429)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhh
Confidence 7899999999999999877899999999999999999999988 468899999999999999999987642 233
Q ss_pred cccc--CCCeeEecCCCCcCCCCCCC-hHHHHHHHHHHHHccCCCceEEEEEccc-CCCCcceeCCCChHHHHHHHHHHh
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFGAD-GEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKA 287 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d-~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~ 287 (480)
..+. ..++..++.|+.+ ++.+ .+.+++.++++++.. ++++++||+||+ ||++|.+++|++|+++|+++|++|
T Consensus 165 ~~~~~~~~~~~~~~~p~~~---~~~~~~~~~l~~l~~~i~~~-~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 165 GLFNHSLPVQYFLPQPSIK---FGEEWNDEAIEPLQDLLEQK-GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred hcccccCCCCeEeCCCCcc---cchhHHHHHHHHHHHHHHhC-CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 2222 2355566665432 1111 123466778888643 468999999997 999999999999999999999999
Q ss_pred CCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC-----CCccccCCCcHHHH
Q 011669 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR-----RNYFNTFGGNPVCT 361 (480)
Q Consensus 288 gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~-----~~~~~t~~~~~~~~ 361 (480)
|+++|+||||+||||+| .+|+++++|+.|||+||||+++|| +|++++++++++++.+.. ..+++||++||++|
T Consensus 241 g~llI~DEv~tG~GrtG-~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 319 (429)
T PRK06173 241 GVLLIFDEIATGFGRTG-KLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLAC 319 (429)
T ss_pred CCeEEecchhcCCCcCC-cchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHH
Confidence 99999999999999999 788899999999999999999999 599999999999998753 24778999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCc
Q 011669 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 362 aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 441 (480)
++++++|++++++++.+++++++++|+++|+++ .+++.+.++|+.|+|+++++.... ....+.+.|+++||
T Consensus 320 aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~--------~~~~i~~~l~e~Gi 390 (429)
T PRK06173 320 AIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPV--------NMATLQPRFVEHGI 390 (429)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCcc--------cHHHHHHHHHHCCe
Confidence 999999999999899999999999999999987 457888899999999999995321 14568889999999
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+.+ +++||.||+++|++|+|+++++|++++.+
T Consensus 391 ~v~~~g---~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 391 WVRPFG---KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred EEEecC---CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 998754 79999999999999999999999999864
No 48
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.2e-69 Score=552.79 Aligned_cols=381 Identities=26% Similarity=0.380 Sum_probs=330.1
Q ss_pred CeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCCCE
Q 011669 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNLKV 160 (480)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~~~ 160 (480)
|+.+++|+|+|+||.|||+||||.+|++++++||+||+|++|+++|++++.|... .+.++...+|+++|++..|.++++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 4789999999999999999999999999999999999999999999999876544 357899999999999999877889
Q ss_pred EEEeCCHHHHHHHHHHHHHhh-----cCCceEEEEcCCcccccccccccccCC-Ccccccc--CCCeeEecCCCCcCC-C
Q 011669 161 VFFTNSGTEANELAIMMARLY-----TGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVV--QTGVHHALNPDPYRG-V 231 (480)
Q Consensus 161 v~f~~sGseA~~~Alk~ar~~-----~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~--~~g~~~~~~p~~~~~-~ 231 (480)
|+|+||||||||.|||+||.+ +++.+||+++++|||.+.+++++++.. .++..+. .+++..++.|+.+.. .
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGE 185 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchh
Confidence 999999999999999999998 578899999999999999999987632 2222221 245556665543211 0
Q ss_pred CCCChHHHHHHHHHHHHccCCCceEEEEEccc-CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc
Q 011669 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310 (480)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~ 310 (480)
|. ...+++++++++.. ++++++||+||+ |+.+|+++++++||++|+++|++||+++|+||||+||||+| .+|++
T Consensus 186 ~~---~~d~~~l~~~l~~~-~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG-~~fa~ 260 (428)
T PRK07986 186 WD---ERDIAPFARLMAAH-RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG-KLFAC 260 (428)
T ss_pred hH---HHHHHHHHHHHHhC-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC-Ceeee
Confidence 10 12256778778643 458999999996 99999999999999999999999999999999999999999 78899
Q ss_pred cccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-----CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 011669 311 EAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVG 384 (480)
Q Consensus 311 ~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-----~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~ 384 (480)
+++|+.||++|+||+++|| +|+|++++++++++.+... .+++||++||++|++++++|++++++++.+++++++
T Consensus 261 ~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g 340 (428)
T PRK07986 261 EHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIE 340 (428)
T ss_pred cccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999 6999999999999988653 377899999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHH
Q 011669 385 SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464 (480)
Q Consensus 385 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~ 464 (480)
++++++|+++. +++.+.++||.|+|+++++..+. ....+.+.|+++||++.+.+ +++||.||+++|++
T Consensus 341 ~~l~~~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~~~Gl~~~~~g---~~i~~~Ppl~it~~ 408 (428)
T PRK07986 341 AQLREELAPLR-DAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFVEQGVWIRPFG---KLIYLMPPYIILPE 408 (428)
T ss_pred HHHHHHHHHHh-cCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHHHCCcEEEecC---CEEEEeCCCCCCHH
Confidence 99999999986 48889999999999999985421 14568889999999998754 79999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 011669 465 DADYLVDVMDYSLSK 479 (480)
Q Consensus 465 ~id~~l~~l~~~l~~ 479 (480)
||++++++|++++++
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999864
No 49
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=7.6e-69 Score=545.15 Aligned_cols=374 Identities=30% Similarity=0.522 Sum_probs=330.9
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++.+|+|+||||+|||+||||.+|++++++||+||+|.+|+.+|++++.|....+.++...+|+++|++..|. .+
T Consensus 21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~ 99 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AE 99 (408)
T ss_pred CCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CC
Confidence 45799999999999999999999999999999999999999999999999987766556788899999999999875 37
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc---C----CceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT---G----CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRG 230 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~---~----~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~ 230 (480)
+|+|++|||||||.|||+||.++ + +.+||.|+++|||++.+++++++.+.++..+.. .++..++++
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~----- 174 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN----- 174 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCC-----
Confidence 99999999999999999999984 3 567999999999999999999886655433321 344444332
Q ss_pred CCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc
Q 011669 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310 (480)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~ 310 (480)
| .+.++++++ .+++++||+||+|++||++.++++|+++|+++|++||+++|+||||+||||+| .+|+.
T Consensus 175 ----d----~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G-~~~a~ 242 (408)
T PRK04612 175 ----D----VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG-TLFAH 242 (408)
T ss_pred ----C----HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-chhhh
Confidence 2 467777774 35899999999999999998889999999999999999999999999999999 78887
Q ss_pred cccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 011669 311 EAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER 390 (480)
Q Consensus 311 ~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~ 390 (480)
+.+++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.+++++++++++++
T Consensus 243 ~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 243 WQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAG 322 (408)
T ss_pred hhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999888777788999999999999999999999999999999999999999
Q ss_pred HHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHH
Q 011669 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 391 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l 470 (480)
|+++.++++.+.+++|.|+|+++++..+. ......+.+.|+++||++.+.+ .+.+||.||+++|++||++++
T Consensus 323 l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~------~~~a~~i~~~l~~~Gvlv~~~g--~~~lRl~Ppl~it~eeid~~l 394 (408)
T PRK04612 323 LEALNAEFGVFAQVRGRGLMLGAVLAPAH------AGQAGAILDLAAEHGLLLLQAG--PDVLRFVPALNLTDAELADGL 394 (408)
T ss_pred HHHHHhhCCCeeeeeccceEEEEEecCch------hhHHHHHHHHHHHCCeEEeeCC--CCEEEEcCCccCCHHHHHHHH
Confidence 99999999999999999999999996421 1235678889999999998764 489999999999999999999
Q ss_pred HHHHHHHhh
Q 011669 471 DVMDYSLSK 479 (480)
Q Consensus 471 ~~l~~~l~~ 479 (480)
++|++++.+
T Consensus 395 ~~l~~~l~~ 403 (408)
T PRK04612 395 ARLRLALAD 403 (408)
T ss_pred HHHHHHHHH
Confidence 999998864
No 50
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=8.6e-69 Score=546.80 Aligned_cols=384 Identities=26% Similarity=0.418 Sum_probs=330.4
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhC--CCC
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKM--PGN 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~--~~~ 157 (480)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|+++..+... .+.++...+|+++|++.. |.+
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 48999999999999999999999999999999999999999999999987654433 345888999999999985 322
Q ss_pred C-CEEEE-eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc--cCCCeeEecCCCCcCCCCC
Q 011669 158 L-KVVFF-TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFG 233 (480)
Q Consensus 158 ~-~~v~f-~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~g~~~~~~p~~~~~~~~ 233 (480)
. ++++| +||||||||.|||+||.+++|.+||+++++|||++.+++++++.+.++... +..++..+++|+...
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~---- 172 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLG---- 172 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccc----
Confidence 3 24656 599999999999999999999999999999999999999998765444333 224666666654221
Q ss_pred CChHHHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 234 ADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 234 ~d~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
+...+++.+++++++.. .+++++||+||+|+++|.+++|++||++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 173 -~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~~a~~ 250 (412)
T TIGR02407 173 -GDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG-TFFSFE 250 (412)
T ss_pred -cchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hhHHhc
Confidence 11123567888886432 25789999999999999999999999999999999999999999999999999 788999
Q ss_pred ccCCCcceeeecccccc-CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV-IQKDKLQNNAHVVGSYLKE 389 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~-G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~-i~~~~~~~~~~~~~~~l~~ 389 (480)
++++.||++++||++++ |+|+|++++++++ +.+....+.+||++||++|+++.++|+. ++++++.++++++++++++
T Consensus 251 ~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 251 PAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQE 329 (412)
T ss_pred ccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999998 9999999999987 6666566889999999999999999995 8888899999999999999
Q ss_pred HHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHH
Q 011669 390 RLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 390 ~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~ 468 (480)
+|+++.++++ .+.++++.|+|+|+++.. ......+.+.|+++||++.+.+.+++.|||+||+++|++|+++
T Consensus 330 ~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~--------~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~ 401 (412)
T TIGR02407 330 RLDRIVAEYPELIKQVRGRGLMQGIECGD--------GDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQ 401 (412)
T ss_pred HHHHHHhhCCCceEeeecceeEEEEEecC--------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHH
Confidence 9999998887 678999999999999943 2345678899999999998776666899999999999999999
Q ss_pred HHHHHHHHHhh
Q 011669 469 LVDVMDYSLSK 479 (480)
Q Consensus 469 ~l~~l~~~l~~ 479 (480)
++++|++++++
T Consensus 402 ~~~~l~~~l~~ 412 (412)
T TIGR02407 402 GLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 51
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=5.8e-69 Score=536.03 Aligned_cols=356 Identities=33% Similarity=0.577 Sum_probs=313.4
Q ss_pred ccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCC
Q 011669 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN 157 (480)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~ 157 (480)
.|+.|+.+++|+|+|+||.|||+||||.+|+++.++||+||+|++|+++|++++.+....+.++...+++++|++.. +
T Consensus 3 ~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~--~ 80 (364)
T PRK04013 3 LYRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV--N 80 (364)
T ss_pred CcCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc--C
Confidence 35778999999999999999999999999999999999999999999999999877666678999999999999997 3
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCCCCC
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGAD 235 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d 235 (480)
.++++|+||||||++.|+|+||.++++++||+++++|||++.+++++++.+.++....+ .++..++++ |
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~---------d 151 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN---------D 151 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC---------C
Confidence 57899999999999999999999999999999999999999999999886655443322 344444432 2
Q ss_pred hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC
Q 011669 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV 315 (480)
Q Consensus 236 ~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~ 315 (480)
.+.+++.+. +++++||+||+|+++|.++++++|+++|+++|++||+++|+||||+|| |+| ++|+++++++
T Consensus 152 ----~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG-~~~a~~~~gv 221 (364)
T PRK04013 152 ----VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG-KFLAIEHYKV 221 (364)
T ss_pred ----HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC-chhHHHhcCC
Confidence 456777774 489999999999999999999999999999999999999999999999 999 7999999999
Q ss_pred CcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhH
Q 011669 316 VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 316 ~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~ 395 (480)
.||++|+||+++||+|+|+++.++++ ....+++||++||++|++++++|++++++++.+++++. |.++.
T Consensus 222 ~PDiv~~gK~lggG~P~~a~~~~~~~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~ 290 (364)
T PRK04013 222 EPDIVTMGKGIGNGVPVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK 290 (364)
T ss_pred CCCEEEecccccCCceeEEEEecccc----cCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc
Confidence 99999999999999999999998876 23458899999999999999999999999999988774 33332
Q ss_pred HhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 396 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.+.+.++||.|+|+++++.. + ...+.+.|+++|+++.+.+ .+++||.||+++|++|+++++++|++
T Consensus 291 --~~~v~~vRG~Gl~~gve~~~------~----~~~i~~~~~~~Gll~~~~g--~~vlr~~Ppl~it~~~i~~~~~~l~~ 356 (364)
T PRK04013 291 --GERVVTTRGRGLMIGIVLKK------P----VGKYVEELQNRGYLVHTAG--QRVIRLLPPLIISKDTMEEAKSAIEG 356 (364)
T ss_pred --cCcceeeeeCcEEEEEEeCC------c----HHHHHHHHHhCCcEEeeCC--CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 26789999999999999953 1 3568888999999998764 48999999999999999999999999
Q ss_pred HHhh
Q 011669 476 SLSK 479 (480)
Q Consensus 476 ~l~~ 479 (480)
++++
T Consensus 357 ~l~~ 360 (364)
T PRK04013 357 VIND 360 (364)
T ss_pred HHHH
Confidence 9875
No 52
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.6e-68 Score=544.84 Aligned_cols=407 Identities=27% Similarity=0.390 Sum_probs=340.3
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc-----CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 011669 58 PSADEILAKRKTFLSPSLFH---LY-----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~-----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~ 129 (480)
+++.+++++.+++++.+... ++ +.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++
T Consensus 4 ~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (428)
T PRK12389 4 TKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE 83 (428)
T ss_pred hhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHH
Confidence 57889999999998765422 22 35899999999999999999999999999999999999999999999999
Q ss_pred hccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCC
Q 011669 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
++.+ ..+.++...+++++|++.+| +.++|+|+||||||||.|+|+||.++++.+||.|+++|||++.++++.++...
T Consensus 84 ~~~~--~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~ 160 (428)
T PRK12389 84 NGVL--YGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGP 160 (428)
T ss_pred hCCc--cCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcc
Confidence 8754 23578899999999999988 47899999999999999999999999999999999999999999999887543
Q ss_pred ccccccC-CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 210 WKFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 210 ~~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
++...+. .++.....++.++.+++ | .+.++++++.. .+++++||+||+|+++|.++|+++||++|+++|++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-d----~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g 234 (428)
T PRK12389 161 STLGTPDSAGVPKSIAQEVITVPFN-D----IEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAG 234 (428)
T ss_pred cccCCCCCCCCCCcccCceEEcCCC-C----HHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 3221111 12221122233333443 3 56788888643 3589999999999999999999999999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC---CCccccCCCcHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGH 365 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~---~~~~~t~~~~~~~~aaa~ 365 (480)
+++|+||||||| |+| ..++++++|+.||++|+||+++||+|+|++++++++++.+.. ..+++||++||++|++++
T Consensus 235 ~llI~DEV~tG~-Rt~-~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaal 312 (428)
T PRK12389 235 ALVIYDEVITAF-RFM-YGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGI 312 (428)
T ss_pred CEEEEEcccccc-ccC-cchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHH
Confidence 999999999999 998 566778899999999999999999999999999999998853 347799999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE-eccceeEEEEEecCCCc-----CCCCHHHHHHHHHHHHHc
Q 011669 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKEM 439 (480)
Q Consensus 366 a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 439 (480)
++|++++++++.+++++++++++++|+++.++++.+.++ ++.| ++++++..+... ..++......+.+.|+++
T Consensus 313 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 391 (428)
T PRK12389 313 ACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ 391 (428)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC
Confidence 999999988999999999999999999998889887777 7777 778998754321 111333456788899999
Q ss_pred CceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 440 GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 440 Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
||++.+.+ .+. +.||+++|++||++++++|+++++++
T Consensus 392 Gv~~~~~~--~~~--~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 392 GINLAPSK--YEA--WFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CcEeecCC--CCC--eeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 99998754 222 35889999999999999999999764
No 53
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=6.2e-68 Score=544.43 Aligned_cols=409 Identities=25% Similarity=0.342 Sum_probs=332.4
Q ss_pred CCCHHHHHHHHhhhcCCcccc---cc----CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 011669 57 GPSADEILAKRKTFLSPSLFH---LY----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~ 129 (480)
.+++.+++++.+++++.+... ++ ..|+++.+|+|+||||+|||+||||.+|++++++||+||+|.+|+.+|++
T Consensus 50 ~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~ 129 (474)
T PLN02482 50 TTKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK 129 (474)
T ss_pred ChHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHh
Confidence 368899999999998654422 12 34899999999999999999999999999999999999999999999999
Q ss_pred hccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCC
Q 011669 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
++.+. ..+++...+|+|+|++.+|. +++|+|+||||||++.|||+||.+|+|.+||.|+++|||++...........
T Consensus 130 ~~~~~--~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~ 206 (474)
T PLN02482 130 KGTSF--GAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGV 206 (474)
T ss_pred hCCCC--CCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCc
Confidence 87542 34678899999999999986 7899999999999999999999999999999999999998866543322111
Q ss_pred cccccc-CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 210 WKFNVV-QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 210 ~~~~~~-~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
.....+ ..+++....++.+..+|+ | .+.++++++.. ++++++||+||+++++|.++|+++||++|+++|++||
T Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~n-d----~~~l~~~l~~~-~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g 280 (474)
T PLN02482 207 ATLGLPDSPGVPKAATSATLTAPYN-D----LEAVKKLFEAN-KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENG 280 (474)
T ss_pred cccCCCCCCCCCCCCCCCeEEecCC-C----hHHHHHHHHhC-CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 111111 123322222233344553 4 56788888653 4689999999999999999999999999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC---CCccccCCCcHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGH 365 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~---~~~~~t~~~~~~~~aaa~ 365 (480)
+++|+|||++|| |+| .+++++++|+.||++||||++|||+|+|++++++++++.+.. ..+++||++||+++++++
T Consensus 281 ~lLI~DEV~tGf-R~g-~~ga~~~~gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAal 358 (474)
T PLN02482 281 ALLVFDEVMTGF-RIA-YGGAQEYFGITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (474)
T ss_pred CEEEEeccccCe-ecC-cchHhHHhCCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHH
Confidence 999999999999 999 678888899999999999999999999999999999998863 246789999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCC-----cCCCCHHHHHHHHHHHHHcC
Q 011669 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ-----LKTPAKAETLYIMDKMKEMG 440 (480)
Q Consensus 366 a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~-----~~~~~~~~~~~~~~~l~~~G 440 (480)
++|++++++++.+++++++++++++|+++..+++....+.+.+.|++++|..+.. ...++......+.+.|+++|
T Consensus 359 a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~G 438 (474)
T PLN02482 359 HTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEG 438 (474)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCC
Confidence 9999998889999999999999999999987764332222323388888875421 11233445667889999999
Q ss_pred ceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 441 VLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 441 v~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
|++.+.+... + .||+++|++|||+++++++++++++
T Consensus 439 v~~~~~~~~~---~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 439 VYLAPSQFEA---G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred eEEeccCCCC---C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 9998754211 2 3899999999999999999998764
No 54
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=3e-68 Score=545.37 Aligned_cols=384 Identities=28% Similarity=0.464 Sum_probs=329.5
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhC--CCC
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKM--PGN 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~--~~~ 157 (480)
.|+++++|+|+||||.|||+||||.+|++++++||+||+|.+|+++|+++..+... .+.++...+|+++|++.+ |.+
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 58999999999999999999999999999999999999999999999997654433 346788899999999975 333
Q ss_pred CC-EEEE-eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc--cCCCeeEecCCCCcCCCCC
Q 011669 158 LK-VVFF-TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFG 233 (480)
Q Consensus 158 ~~-~v~f-~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~~~g~~~~~~p~~~~~~~~ 233 (480)
.+ +++| +||||||||.|||+||.+++|.+||+++++|||++.+++++++++.++... +..++.++++|+.+++.
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-- 178 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGD-- 178 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccc--
Confidence 43 5666 589999999999999999999999999999999999999998866554332 22467777776543221
Q ss_pred CChHHHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 234 ADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 234 ~d~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
...++++++++++.. .+++++||+||+|+++|+++++++||++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 179 ---~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~~~~ 254 (425)
T PRK09264 179 ---VDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG-TFFSFE 254 (425)
T ss_pred ---hhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc-HHHHHh
Confidence 112567888886432 24799999999999999999999999999999999999999999999999999 788889
Q ss_pred ccCCCcceeeecccccc-CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL-KVIQKDKLQNNAHVVGSYLKE 389 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~-G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L-~~i~~~~~~~~~~~~~~~l~~ 389 (480)
++++.||++|+||++++ |+|+|++++++++. .+....+.+||++||+++++++++| ++++++++.++++++++++++
T Consensus 255 ~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~ 333 (425)
T PRK09264 255 RAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRE 333 (425)
T ss_pred hcCCCCCEEEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999998 99999999999974 5555567889999999999999999 666777899999999999999
Q ss_pred HHHHhHHhcCc-eeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHH
Q 011669 390 RLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 390 ~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~ 468 (480)
+|+++.++++. +.+++|.|+|+++++.. ......+.+.|+++||++.+.+.+.+.|||+||+++|+++|++
T Consensus 334 ~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--------~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~ 405 (425)
T PRK09264 334 RLEEIAAKYPGLGAEVRGRGMMQGIDFGD--------GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEE 405 (425)
T ss_pred HHHHHHHhCCCceecceecccEEEEEecC--------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHH
Confidence 99999888874 48899999999999942 2345678899999999998876666899999999999999999
Q ss_pred HHHHHHHHHhh
Q 011669 469 LVDVMDYSLSK 479 (480)
Q Consensus 469 ~l~~l~~~l~~ 479 (480)
++++|++++++
T Consensus 406 ~~~~l~~~l~~ 416 (425)
T PRK09264 406 GLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 55
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=9.8e-68 Score=516.02 Aligned_cols=409 Identities=27% Similarity=0.411 Sum_probs=339.9
Q ss_pred CCCHHHHHHHHhhhcCCccc----cccC---CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHH
Q 011669 57 GPSADEILAKRKTFLSPSLF----HLYS---KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIK 129 (480)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~----~~~~---~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~ 129 (480)
.++++++.++.+++++.++. .+.. .|+++.+|+|+||||+|||+|||++++++.+.|||+||.|++|+.+|++
T Consensus 4 ~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~ 83 (432)
T COG0001 4 FPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLE 83 (432)
T ss_pred ccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHH
Confidence 36788999999999865442 1223 6999999999999999999999999999999999999999999999999
Q ss_pred hccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCC
Q 011669 130 RIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209 (480)
Q Consensus 130 ~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~ 209 (480)
+... ..-+++...+++|.|.+++|. .++|.|+||||||+..|||+||.+|+|++||.|+|+|||+.+..+.-.+...
T Consensus 84 ~G~~--fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~ 160 (432)
T COG0001 84 RGLS--FGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGA 160 (432)
T ss_pred hcCC--CCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCc
Confidence 9733 334688999999999999985 6899999999999999999999999999999999999999999987655333
Q ss_pred ccccccC-CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 210 WKFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 210 ~~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
-....|. +|++.....+..-.+|+ | ++.+++++++. .+++|+||+||++++.|.++|.++||++|++||++||
T Consensus 161 ~t~g~p~s~Gvp~~~a~~ti~~~yN-D----~~al~~~~~~~-g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G 234 (432)
T COG0001 161 ATLGSPSSPGVPADVAKHTLVLPYN-D----LEALEEAFEEY-GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHG 234 (432)
T ss_pred ccCCCCCCCCCChhhhccEEEecCC-C----HHHHHHHHHHc-CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 2222232 34433322233333443 5 67888888864 4699999999999999999999999999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCC---ccccCCCcHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN---YFNTFGGNPVCTAAGH 365 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~---~~~t~~~~~~~~aaa~ 365 (480)
++||+|||.||| |.. ...+.+.+|+.||+.||+|.+|||+|+|++.+++++|+.+.+.. +.+|+++||++++|+.
T Consensus 235 ~lLI~DEViTGF-R~~-~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~ 312 (432)
T COG0001 235 ALLIFDEVITGF-RVA-LGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGL 312 (432)
T ss_pred cEEEEecchhhc-ccC-CcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHH
Confidence 999999999999 433 22346789999999999999999999999999999999887643 5699999999999999
Q ss_pred HHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCc-----CCCCHHHHHHHHHHHHHc
Q 011669 366 AVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKEM 439 (480)
Q Consensus 366 a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 439 (480)
++|+.+.+ +..++++.+.+++|+++|+++.+++++...+...|.|+.+.|...... ...+......+.+.|+++
T Consensus 313 atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~ 392 (432)
T COG0001 313 ATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR 392 (432)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC
Confidence 99999987 458999999999999999999999999999999999999998764311 111223345667799999
Q ss_pred CceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 440 GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 440 Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
||++.|... +..+ ++ ..+|+++||+.+++++++++++
T Consensus 393 GV~l~ps~~-ea~f-lS--~ahte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 393 GVYLAPSQF-EAGF-LS--TAHTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred CcccCCccc-ccee-ee--cccCHHHHHHHHHHHHHHHHHh
Confidence 999988642 2222 44 6899999999999999988753
No 56
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.7e-67 Score=540.61 Aligned_cols=384 Identities=29% Similarity=0.468 Sum_probs=332.6
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccCChHHHHHHHHHHHhCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
..|+++.+|+|+||||.|||+||||.+|++++++||+||+|.+|+++|++++.+... .+.++...+|+++|++.+|.++
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~ 102 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGL 102 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999999999999999999999999999999866543 4678889999999999998778
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCC
Q 011669 159 KVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRG 230 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~ 230 (480)
++|+|++|||||||.|+|+||.+ ++|.+||+++++|||++.+++++++.+.++..... .++..+++|..
T Consensus 103 ~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~--- 179 (423)
T PRK05964 103 DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD--- 179 (423)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc---
Confidence 89999999999999999999998 67899999999999999999998876544332221 34555555431
Q ss_pred CCCCChHHHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc
Q 011669 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (480)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~ 309 (480)
+....+++.++++++.. ++++++||+|| +|+++|+.+++++||++|+++|++||+++|+||||+||||+| .+|+
T Consensus 180 ---d~~~~~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G-~~~a 254 (423)
T PRK05964 180 ---GYEQATLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG-TLFA 254 (423)
T ss_pred ---hhHHHHHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc-chhH
Confidence 11234467788888643 46899999999 799999999999999999999999999999999999999999 7888
Q ss_pred ccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC------CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHH
Q 011669 310 FEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR------NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382 (480)
Q Consensus 310 ~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~------~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~ 382 (480)
++.+++.||++++||+++|| +|+|++++++++++.+... .+++||++||+++++++++|++++++++.+++++
T Consensus 255 ~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~ 334 (423)
T PRK05964 255 CEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAA 334 (423)
T ss_pred HHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 89999999999999999988 8999999999999987532 3678999999999999999999998899999999
Q ss_pred HHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCC
Q 011669 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFT 462 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t 462 (480)
+++++++.|+++. +++.+.++++.|+|+++++..+.. ......+.+.|.++||++.+. ++.+||+||+++|
T Consensus 335 ~g~~l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l~~~Gv~v~~~---~~~lR~~p~l~~t 405 (423)
T PRK05964 335 LSAGLAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFALERGVLLRPL---GNTIYLMPPYIIT 405 (423)
T ss_pred HHHHHHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHHHHCCeEEEec---CCEEEEeCCcccC
Confidence 9999999999884 477788899999999999964321 123567888999999999875 3689999999999
Q ss_pred HHHHHHHHHHHHHHHhhC
Q 011669 463 KEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 463 ~~~id~~l~~l~~~l~~~ 480 (480)
++|||+++++|+++++++
T Consensus 406 ~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 406 AEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999875
No 57
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2e-67 Score=532.00 Aligned_cols=366 Identities=33% Similarity=0.547 Sum_probs=325.2
Q ss_pred EEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEe
Q 011669 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFT 164 (480)
Q Consensus 85 ~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~ 164 (480)
+++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+|+++|++..+ .++|+|+
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~ 78 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFC 78 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEe
Confidence 46899999999999999999999999999999999999999999998776655668899999999999874 5799999
Q ss_pred CCHHHHHHHHHHHHHhhcC-------------CceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcC
Q 011669 165 NSGTEANELAIMMARLYTG-------------CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYR 229 (480)
Q Consensus 165 ~sGseA~~~Alk~ar~~~~-------------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~ 229 (480)
+|||||||.|||+||.+++ +.+||+++++|||++.+++++++...++..+.. +++.+++++
T Consensus 79 ~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---- 154 (382)
T PLN00144 79 NSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG---- 154 (382)
T ss_pred CCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC----
Confidence 9999999999999999875 468999999999999999999886655433221 455555432
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc
Q 011669 230 GVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309 (480)
Q Consensus 230 ~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~ 309 (480)
| .+.+++++. .+++++||+||+||++|.+.++++|+++|+++|++||+++|+||||+||||+| .+|+
T Consensus 155 -----d----~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g-~~~~ 221 (382)
T PLN00144 155 -----N----LEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG-YLWA 221 (382)
T ss_pred -----C----HHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-hHhh
Confidence 2 567777774 35899999999999999998899999999999999999999999999999999 6888
Q ss_pred ccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 011669 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE 389 (480)
Q Consensus 310 ~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~ 389 (480)
++.+++.||++||||++++|+|+|++++++++++.+....+.+||++||++|++++++|++++++++.++++++++++++
T Consensus 222 ~~~~~~~PDi~t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 301 (382)
T PLN00144 222 HEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRE 301 (382)
T ss_pred hhhcCCCCCEEEecccccCCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999887778899999999999999999999999999999999999999
Q ss_pred HHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHH
Q 011669 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 390 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~ 469 (480)
.|+++.++++.+.++++.|+|+|+++.. + ...+.+.++++||++.+++. ++.|||+||+++|+++++++
T Consensus 302 ~l~~~~~~~~~~~~vrg~G~~~~l~l~~------~----~~~~~~~~~~~Gv~i~~~~~-~~~lrl~p~~~~~~~~i~~~ 370 (382)
T PLN00144 302 LLRRKLGGNPHVKEVRGVGLLVGIQLDV------P----AGPLVDACRDSGLLVLTAGK-GDVVRLVPPLVISEAELEQA 370 (382)
T ss_pred HHHHHHhhCCCceeeecCceEEEEEecC------c----cHHHHHHHHHCCeEEeecCC-CCEEEEeCCCccCHHHHHHH
Confidence 9999988888889999999999999921 1 25688899999999988753 48999999999999999999
Q ss_pred HHHHHHHHhhC
Q 011669 470 VDVMDYSLSKM 480 (480)
Q Consensus 470 l~~l~~~l~~~ 480 (480)
+++|++++.++
T Consensus 371 ~~~l~~~l~~~ 381 (382)
T PLN00144 371 VEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 58
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.1e-66 Score=530.62 Aligned_cols=372 Identities=30% Similarity=0.536 Sum_probs=328.7
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++.+|+|+|+||.|||+||||.+|+++.+|||+||+|.+|+.+|++++.+....+.++...+|+++|++..+ .+
T Consensus 16 ~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~ 93 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATF--AD 93 (397)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CC
Confidence 4589999999999999999999999999999999999999999999999987555445678889999999999985 46
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCCCcCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGV 231 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~~~~~~ 231 (480)
+++|+|||+|||+.|||+||.++ ++.+||+++++|||++.+++++++.+.++.... ..++..++++
T Consensus 94 ~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 167 (397)
T TIGR03246 94 KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN------ 167 (397)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC------
Confidence 89999999999999999999985 788999999999999999999887654433222 2355555433
Q ss_pred CCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
| .++++++++ +++++||+||+|+++|.++++++||++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 168 ---d----~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G-~~~a~~ 235 (397)
T TIGR03246 168 ---D----LAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 235 (397)
T ss_pred ---C----HHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc-cchhhh
Confidence 3 577888774 3799999999999999999999999999999999999999999999999999 788888
Q ss_pred ccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
++++.||++|+||++++|+|+||+++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 236 ~~gv~pDi~t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 236 HYGVTPDILTSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGL 315 (397)
T ss_pred hcCCCCCEEEeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999987767789999999999999999999988889999999999999999
Q ss_pred HHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHH
Q 011669 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+++..+++.+.++++.|+++++++..+ .......+++.|+++|+++.+.+ .+++||+||+++|++||+++++
T Consensus 316 ~~l~~~~~~~~~vrg~G~~~~i~~~~~------~~~~~~~~~~~l~~~Gv~~~~~g--~~~lR~~p~~~~t~~~i~~~~~ 387 (397)
T TIGR03246 316 EKINARYNVFSEIRGKGLLIGAVLTEA------YQGKAKQFVNAAAEEGVIALIAG--PNVVRFAPSLVISDDDIDEGLA 387 (397)
T ss_pred HHHHhcCCCeEeeecCceEEEEEEcCc------hhhHHHHHHHHHHHCCeEEeecC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 999877888899999999999998542 11235678899999999998754 4789999999999999999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|++++.+
T Consensus 388 ~l~~~l~~ 395 (397)
T TIGR03246 388 RFERAIEQ 395 (397)
T ss_pred HHHHHHHH
Confidence 99999875
No 59
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-66 Score=532.09 Aligned_cols=382 Identities=28% Similarity=0.421 Sum_probs=315.4
Q ss_pred CeEEEeeeccEEEeC-CCCEEEeccCCcccccCCCCCHHHHH--HHHHHHHhccc--cc-cccCChHHHHHHHHHHHhC-
Q 011669 82 PLNVVDGKMQYLFDE-NGRRYLDAFGGIATVCCGHCHPYVVD--SIVNQIKRIQH--ST-VLYLNHAIADFAEALASKM- 154 (480)
Q Consensus 82 p~~~~~g~G~~l~d~-dG~~ylD~~~g~~~~~lGh~~p~v~~--A~~~~~~~~~~--~~-~~~~~~~~~~l~e~L~~~~- 154 (480)
++.+++|+|+||||. |||+||||.+|++++++||+||+|++ |+++|+.++.+ .. ..+.++...+++++|++..
T Consensus 27 ~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~ 106 (443)
T PRK08297 27 VLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG 106 (443)
T ss_pred ceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC
Confidence 355899999999996 99999999999999999999999999 99999998653 22 2467889999999999998
Q ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHhhc------------CCceEEEEcCCcccccccccccccCCCccc-cccCCCeeE
Q 011669 155 PGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWKF-NVVQTGVHH 221 (480)
Q Consensus 155 ~~~~~~v~f~~sGseA~~~Alk~ar~~~------------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~-~~~~~g~~~ 221 (480)
|.++++|+|+||||||||.|||+||.|+ +|.+||+++++|||++.+++++++...++. ..+..+...
T Consensus 107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK08297 107 DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPR 186 (443)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccc
Confidence 6667899999999999999999999873 257899999999999999999987533221 112112222
Q ss_pred ecCCCCcCCCCC-CC-------hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 222 ALNPDPYRGVFG-AD-------GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 222 ~~~p~~~~~~~~-~d-------~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
++.|.. ..++. .+ ...++++++++++.. ++++++||+||+|+++|.++||++||++|+++|++||+++|+
T Consensus 187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~ 264 (443)
T PRK08297 187 IDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFERH-PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIF 264 (443)
T ss_pred cCCCCC-CCCCcccccchhhHHHHHHHHHHHHHHHhC-CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 222221 11110 01 112356677777653 568999999999999999999999999999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhh----c-CCCccccCCCcHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVL----T-RRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l----~-~~~~~~t~~~~~~~~aaa~a~L 368 (480)
|||||||||+| .+|+++++++.||++||||++ |+|+++..+++.+.. . ...+++||++||++|++++++|
T Consensus 265 DEV~tGfGRtG-~~~a~~~~gv~PDiv~~gK~l----~~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 339 (443)
T PRK08297 265 DEVQTGVGLTG-TAWAYQQLGVRPDIVAFGKKT----QVCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRIL 339 (443)
T ss_pred echhhccCccc-hHHHHHhcCCCCCEEEecccc----cccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHH
Confidence 99999999999 899999999999999999997 456666666654322 1 2347899999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee-eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG 447 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 447 (480)
++++++++.+++++++++++++|+++.++++.+. +++|.|+|+++++.+ ......+.+.|+++||++.+.+
T Consensus 340 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~--------~~~~~~~~~~l~~~Gvl~~~~~ 411 (443)
T PRK08297 340 EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT--------TADRDEVIRRLWEEGVLVLPCG 411 (443)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC--------HHHHHHHHHHHHHCCEEEecCC
Confidence 9999999999999999999999999998898665 999999999999942 2235678889999999998765
Q ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 448 FYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 448 ~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
.+.+||+||+++|++|||+++++|+++++++
T Consensus 412 --~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 --ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred --CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999998764
No 60
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-67 Score=498.69 Aligned_cols=378 Identities=33% Similarity=0.508 Sum_probs=324.4
Q ss_pred ccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC-C
Q 011669 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-G 156 (480)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~-~ 156 (480)
+-+.|+++++++|+.+||.||++||||++++++..+||+||+|.+|+.+|+.++.|+.+.+......++++.|.+... .
T Consensus 35 ~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~ 114 (433)
T KOG1401|consen 35 YARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKG 114 (433)
T ss_pred cCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCC
Confidence 445689999999999999999999999999999999999999999999999999998887776668999999999874 3
Q ss_pred CCCEEEEeCCHHHHHHHHHHHHHhhcCCce------EEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCc
Q 011669 157 NLKVVFFTNSGTEANELAIMMARLYTGCND------IISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPY 228 (480)
Q Consensus 157 ~~~~v~f~~sGseA~~~Alk~ar~~~~~~~------ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~ 228 (480)
..++|+|+||||||||.|||+||+++..+. +|.|+++|||.+++++++++++.|+.+..+ +++....+
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y---- 190 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY---- 190 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc----
Confidence 578999999999999999999999876544 999999999999999999988887765433 44444332
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcc
Q 011669 229 RGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (480)
Q Consensus 229 ~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~ 308 (480)
+| ..+++++++.+ .++++|||+||+||+||.+++.++|+..|+++|+++|++||.|||||||||+| ..|
T Consensus 191 -----nd----~t~l~k~~~~h-~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g-~~~ 259 (433)
T KOG1401|consen 191 -----ND----STALEKLFESH-KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG-YGW 259 (433)
T ss_pred -----CC----HHHHHHHHHhC-CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc-hHH
Confidence 23 57889999865 45799999999999999999999999999999999999999999999999999 899
Q ss_pred cccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCc---cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 011669 309 GFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNY---FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGS 385 (480)
Q Consensus 309 ~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~---~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~ 385 (480)
++++++++|||.|++|.++||+|+|++++++++++.+....+ ++||++||++|.++..+|+.+.+.++.+++.+.++
T Consensus 260 a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k 339 (433)
T KOG1401|consen 260 AQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGK 339 (433)
T ss_pred HHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHhcCceee-EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeC--CCC
Q 011669 386 YLKERLTALKDKYGIIGD-VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITP--PLC 460 (480)
Q Consensus 386 ~l~~~L~~l~~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p--~~~ 460 (480)
.|+++|.+...+.+.... .+++|+++++++..+ ...+.+...+.|.++.+.+. -...+||.| .++
T Consensus 340 ~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p----------~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~ 409 (433)
T KOG1401|consen 340 ELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGP----------VYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLT 409 (433)
T ss_pred HHHHHHHHHhccCCCceeeeeeeEEEEEEEEeec----------hhhhhhhhhhhhHHHHHHhcccccceEEEecccccc
Confidence 999999998888765433 389999999988643 22334444445555544321 113478887 445
Q ss_pred C--CHHHHHHHHHHHHHHHhhC
Q 011669 461 F--TKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 461 ~--t~~~id~~l~~l~~~l~~~ 480 (480)
+ ++|.++++++++.+.+.++
T Consensus 410 ~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 410 VEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred ccCcHHHHHHHHHHHHHHHHHh
Confidence 4 4899999999999988753
No 61
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.7e-66 Score=525.25 Aligned_cols=368 Identities=33% Similarity=0.588 Sum_probs=317.1
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++++++|+|+||.|||+||||++|+++.++||+||+|.+|+.+|++++.+.+..+.++...+|+++|.+.. +.+
T Consensus 17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~--~~~ 94 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHS--CFD 94 (395)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhcc--CCC
Confidence 457899999999999999999999999999999999999999999999998877655567888999999999875 357
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc-----CCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVF 232 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~ 232 (480)
+++|++||+|||+.|+|++|.++ ++.+||+++++|||++.+++++++.+.++....+ .++.+.++
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-------- 166 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL-------- 166 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC--------
Confidence 89999999999999999999873 5688999999999999999999876544432211 23333221
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~ 312 (480)
+| .+++++.++ +++++||+||+|+++|.++++++|+++|+++|++||+++|+||||+||||+| .+|++++
T Consensus 167 -~d----~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG-~~~a~~~ 236 (395)
T PRK03715 167 -ND----IASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG-TLFAYEL 236 (395)
T ss_pred -ch----HHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc-chhhHhh
Confidence 12 567777774 3799999999999999999999999999999999999999999999999999 8889999
Q ss_pred cCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 011669 313 HGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 313 ~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~ 392 (480)
+++.||++|+||++++|+|+|+++++++++. +....+++||++||++|++++++|++++++++.+++++++++++++|+
T Consensus 237 ~gv~PDi~t~gK~lg~G~p~~av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~ 315 (395)
T PRK03715 237 SGIEPDIMTLGKGIGGGVPLAALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLL 315 (395)
T ss_pred cCCCCceeeehhhhhCCcceEEEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999863 444457899999999999999999999988999999999999999999
Q ss_pred HhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc---CceeeccCcCCCEEEEeCCCCCCHHHHHHH
Q 011669 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM---GVLVGKGGFYGNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 393 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~ 469 (480)
++..+++ +.+++|.|+|+++++..+ ....+.+.+.+. |+++.+.. .+.+||+||+++|++|||++
T Consensus 316 ~l~~~~~-i~~vrG~Glm~~i~l~~~---------~~~~~~~~~~~~~~~Gi~~~~~~--~~~lR~~p~l~~t~~ei~~~ 383 (395)
T PRK03715 316 ELSEERG-LEGERGEGLLRALLLGKD---------IGPQIVEKARDMQPDGLLLNAPR--PNLLRFMPALNVTTEEIDQM 383 (395)
T ss_pred HHhhcCC-cCeEEcceeEEEEEecCc---------hHHHHHHHHHhccCCCEEEeecC--CCEEEEeCCcccCHHHHHHH
Confidence 9988777 677999999999999542 123445555555 99987543 57899999999999999999
Q ss_pred HHHHHHHHhhC
Q 011669 470 VDVMDYSLSKM 480 (480)
Q Consensus 470 l~~l~~~l~~~ 480 (480)
+++|+++++++
T Consensus 384 ~~~l~~~l~~~ 394 (395)
T PRK03715 384 IAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHHhh
Confidence 99999998753
No 62
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.3e-65 Score=526.84 Aligned_cols=401 Identities=22% Similarity=0.285 Sum_probs=327.6
Q ss_pred CCHHHHHHHHhhhcCCcc-cc---cc--CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhc
Q 011669 58 PSADEILAKRKTFLSPSL-FH---LY--SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI 131 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~-~~---~~--~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~ 131 (480)
++|.+++++.+++++.+. .. .+ ..|+++++|+|+|+||+|||+||||.+|++++++||+||+|.+|+.+|++++
T Consensus 28 ~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~ 107 (453)
T PRK07046 28 PRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG 107 (453)
T ss_pred hhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhC
Confidence 578899999999987654 22 12 4589999999999999999999999999999999999999999999999987
Q ss_pred cccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccc--cCCC
Q 011669 132 QHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGAT--AQSN 209 (480)
Q Consensus 132 ~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~--~~~~ 209 (480)
.+ ..+.++...+|+|+|++..+ .++|+|+||||||++.|+|+||.+|+|++||.|+++|||++++++... +...
T Consensus 108 ~~--~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~ 183 (453)
T PRK07046 108 LT--TMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPV 183 (453)
T ss_pred CC--CCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCC
Confidence 44 34578999999999999984 689999999999999999999999999999999999999987776542 2111
Q ss_pred ccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 210 WKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 210 ~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
++... .++.....++....+|+ | .+.+++++. .+++++||+||+|+++|.++|+++||++|+++|+|||+
T Consensus 184 ~~~~~--~g~~~~~~~~~~~~~~n-d----~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~ 253 (453)
T PRK07046 184 QRPGL--LGQVHDLTATTRVVEFN-D----LAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGT 253 (453)
T ss_pred CCCCC--CCCCccccCceEeeCCC-C----HHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 11111 11111001112223443 4 567887774 35899999999999999999999999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC---------CCccccCCCcHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---------RNYFNTFGGNPVC 360 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~---------~~~~~t~~~~~~~ 360 (480)
++|+|||+| | |.| .....+++|+.||++||||++|||+|+|++++++++++.+.. ..+.+||++||++
T Consensus 254 llI~DEV~t-f-r~g-~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~ 330 (453)
T PRK07046 254 LLVIDETHT-I-SSG-PGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALA 330 (453)
T ss_pred EEEEEcccc-C-ccC-CcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHH
Confidence 999999998 4 343 111245679999999999999999999999999999998752 1366899999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC-----CC-CHHHHHHHHH
Q 011669 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK-----TP-AKAETLYIMD 434 (480)
Q Consensus 361 ~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~-----~~-~~~~~~~~~~ 434 (480)
|++++++|++++++++.+++++++++|+++|+++.++++.+..++|.|+++.+.+.++.... .+ +......++.
T Consensus 331 ~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (453)
T PRK07046 331 MAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHL 410 (453)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHH
Confidence 99999999999888999999999999999999999999989999999999999886432100 01 2334566788
Q ss_pred HHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 435 KMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 435 ~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
.|+++||++.+. ++.++++|+ +|++|||+++++++++++++
T Consensus 411 ~~~~~Gv~~~~~---~~~~~~~p~--~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 411 YLLNRGVLITPF---HNMMLVCPA--TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHCCCEEecc---cCcEEEeCC--CCHHHHHHHHHHHHHHHHHH
Confidence 899999999864 356889975 89999999999999998753
No 63
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=1.5e-65 Score=523.64 Aligned_cols=372 Identities=31% Similarity=0.539 Sum_probs=326.7
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++++|+|+||||.|||+||||.+|+++++|||+||+|++|+.+|+.++.+....+.++...+|+++|++..+ .+
T Consensus 20 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 97 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--AD 97 (406)
T ss_pred CCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CC
Confidence 4578999999999999999999999999999999999999999999999987665555678889999999999874 46
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGV 231 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~ 231 (480)
+|+|++||+|||+.|+|+||.++ ++.+|+.++++|||++.+++++++.+.++..... .++..++++
T Consensus 98 ~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 171 (406)
T PRK12381 98 RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN------ 171 (406)
T ss_pred eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC------
Confidence 99999999999999999999985 6889999999999999999999886655432211 233333322
Q ss_pred CCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
| .++++++++ +++++||+||+|+++|+++++++|+++|+++|++||+++|+||||+||||+| .+|+++
T Consensus 172 ---d----~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G-~~~~~~ 239 (406)
T PRK12381 172 ---D----LNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 239 (406)
T ss_pred ---C----HHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc-chhhhH
Confidence 3 567777774 4799999999999999998899999999999999999999999999999999 677778
Q ss_pred ccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
.+++.||++||||++++|+|+||+++++++++.+....+.+||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 240 ~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L 319 (406)
T PRK12381 240 HYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERL 319 (406)
T ss_pred hhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999988777889999999999999999999988889999999999999999
Q ss_pred HHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHH
Q 011669 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+++..+++.+..+++.|+|+++++..+. ......+.+.|+++||++.+.+ .+.+||+||+++|+++|+++++
T Consensus 320 ~~l~~~~~~~~~vrg~Gl~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~p~~~~t~~~i~~~~~ 391 (406)
T PRK12381 320 NTINARYGLFSEIRGLGLLIGCVLNAEY------AGKAKQISQEAAKAGVMVLIAG--PNVVRFAPALNISEEEITTGLD 391 (406)
T ss_pred HHHHhhCCCEEEEecCeEEEEEEecCch------hhHHHHHHHHHHHCCcEEeeCC--CCEEEEeCCccCCHHHHHHHHH
Confidence 9997778888899999999999985421 1235678889999999997654 4789999999999999999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|++++++
T Consensus 392 ~l~~~l~~ 399 (406)
T PRK12381 392 RFARACER 399 (406)
T ss_pred HHHHHHHH
Confidence 99998864
No 64
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=6.5e-65 Score=525.97 Aligned_cols=395 Identities=27% Similarity=0.469 Sum_probs=339.9
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 138 (480)
.+.++++..+++..+. +++.|+++.+++|+|+||.||++||||++|++++++||+||+|++|+++|++++.+.+..+
T Consensus 38 ~~~~~~~~~~~~~~~~---~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~ 114 (474)
T PLN02624 38 SSAHLIELEEKYSAHN---YHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAF 114 (474)
T ss_pred chHHHHHHHHHhhccc---cCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccccc
Confidence 4567888877775553 4466899999999999999999999999999999999999999999999999987766567
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc--------CCceEEEEcCCcccccccccccccCCCc
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------GCNDIISLRNAYHGNAAGTMGATAQSNW 210 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~--------~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 210 (480)
.++...+|+++|++.++ .++++|+|||+||||.|||+||.++ ++..||.+.++|||++.+++++++.+.+
T Consensus 115 ~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 115 YNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred CCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 78999999999999984 5789999999999999999999863 2457999999999999999999876544
Q ss_pred ccccc--CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 211 KFNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 211 ~~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
+..+. .+++..+++. | .+.++++++.. .+++++||+||+|+++|.+.++++||++|+++|++||
T Consensus 193 ~~~~~~~~~~~~~~~~~---------d----~~~l~~~l~~~-~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 193 TRGFGPLLPGHLKVDFG---------D----LDALEKIFEED-GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred cccCCCCCCCceEeCCC---------C----HHHHHHHHHhC-CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 43321 1344444332 3 46788888643 4589999999999999999999999999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
+++|+||||+||||+| .+++++++++.||+++|||++++| +|+|++++++++++.+.+..++.||++||++++++.++
T Consensus 259 illI~DEv~tG~GrtG-~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aa 337 (474)
T PLN02624 259 VLMIADEIQTGLARTG-KMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAA 337 (474)
T ss_pred CEEEEeccccCcCcCc-chhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 788888889999999999999977 89999999999998887777889999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeecc
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKG 446 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~ 446 (480)
|+.++++++.+++.+++++++++|+++.++++ .+.++++.|+|+++++..+. +.......+++.|+++||++.++
T Consensus 338 Le~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~----~~~~~a~~~~~~L~e~GV~v~p~ 413 (474)
T PLN02624 338 LQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK----LGPVSAYDVCLKLKERGLLAKPT 413 (474)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC----cChHHHHHHHHHHHhCCeEEecC
Confidence 99998888999999999999999999988887 47789999999999884321 11234567888899999999886
Q ss_pred CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 447 GFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 447 ~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+ ++++||+||+++|+++|++++++|++++++
T Consensus 414 ~--~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 414 H--DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred C--CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 5 578999999999999999999999998764
No 65
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6e-65 Score=518.41 Aligned_cols=405 Identities=23% Similarity=0.301 Sum_probs=330.2
Q ss_pred CCHHHHHHHHhhhcCCcccc---cc----CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHh
Q 011669 58 PSADEILAKRKTFLSPSLFH---LY----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~ 130 (480)
+++.+++++.+++++.+... ++ ..|+++.+|+|+||||.|||+||||.+|++++++||+||+|++|+.+|+++
T Consensus 5 ~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~ 84 (433)
T PRK00615 5 QEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER 84 (433)
T ss_pred HHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh
Confidence 57888999999988665422 23 368999999999999999999999999999999999999999999999998
Q ss_pred ccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccc---ccccccccC
Q 011669 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA---AGTMGATAQ 207 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~---~~~~~~~~~ 207 (480)
+.+ ..+.++...+|+++|.+.+|...++|+|++|||||++.|||+||.+|+|.+||.++++|||++ .++++.++.
T Consensus 85 ~~~--~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~ 162 (433)
T PRK00615 85 GTS--YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSET 162 (433)
T ss_pred CCC--CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCC
Confidence 643 345688999999999999986667999999999999999999999999999999999999998 555555542
Q ss_pred CCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh
Q 011669 208 SNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA 287 (480)
Q Consensus 208 ~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 287 (480)
........ .+ .....+.....++ +| .++++++++.. .+++++||+||+++++|.++|+++|+++|+++|++|
T Consensus 163 ~~~~~~~~-~~-~~~~~~~~~~~~~-~d----~~~l~~~l~~~-~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~ 234 (433)
T PRK00615 163 SLDTLTHL-VD-TDLAHPLTLSLPY-ND----FQIFQTVMNSL-GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT 234 (433)
T ss_pred CcCcCCCC-CC-CCCCCCCeEeCCC-CC----HHHHHHHHHhc-CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 21110000 00 0000111111123 23 56788888654 358999999999999999999999999999999999
Q ss_pred CCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCC---CccccCCCcHHHHHHH
Q 011669 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR---NYFNTFGGNPVCTAAG 364 (480)
Q Consensus 288 gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~---~~~~t~~~~~~~~aaa 364 (480)
|+++|+||||+|| |+| .+++++++++.||++||||++|||+|+|++++++++++.+... .+++||++||++|+++
T Consensus 235 g~llI~DEv~tG~-R~G-~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~ 312 (433)
T PRK00615 235 GSLSIMDEVVTGF-RVA-QGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAG 312 (433)
T ss_pred CCEEEEEcccccc-ccc-HhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHH
Confidence 9999999999999 899 6888889999999999999999999999999999999988532 3668999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCc-eeeEeccceeEEEEEecCCCc-----CCCCHHHHHHHHHHHHH
Q 011669 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKE 438 (480)
Q Consensus 365 ~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~ 438 (480)
+++|++++++++.+++++++++++++|+++..+++. +..++ .|+|++++|..+..+ ...+......+.+.|.+
T Consensus 313 la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 391 (433)
T PRK00615 313 KASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS 391 (433)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH
Confidence 999999998899999999999999999998877432 66777 899999999865321 01123345678999999
Q ss_pred cCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 439 MGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 439 ~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+||++.+...... ..+..+|++|||++++++++++++
T Consensus 392 ~Gv~~~~~~~~~~----~ls~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 392 KGVYLSPSPFEAS----FLSSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred CCeeecCcccccc----ceecCCCHHHHHHHHHHHHHHHHH
Confidence 9999987542222 234789999999999999999875
No 66
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.9e-64 Score=542.19 Aligned_cols=414 Identities=20% Similarity=0.228 Sum_probs=334.1
Q ss_pred CHHHHHHHHhhhcCCccccc--c--CCCeEEEeeecc----EEEeCCCC----EEEeccCCcccccCC-CCCHHHHHHHH
Q 011669 59 SADEILAKRKTFLSPSLFHL--Y--SKPLNVVDGKMQ----YLFDENGR----RYLDAFGGIATVCCG-HCHPYVVDSIV 125 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~~g~G~----~l~d~dG~----~ylD~~~g~~~~~lG-h~~p~v~~A~~ 125 (480)
+.+++.++.+++++....+. + ..|.+|.+++|. |++|.||+ +|||+++|++++++| |+||+|++|+.
T Consensus 313 ~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~ 392 (817)
T PLN02974 313 RLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVA 392 (817)
T ss_pred HHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHH
Confidence 44566677777876544332 1 247889999998 99999998 999999999999999 68999999999
Q ss_pred HHHHhcccccc-ccCChHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHh-hc------------------CC
Q 011669 126 NQIKRIQHSTV-LYLNHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARL-YT------------------GC 184 (480)
Q Consensus 126 ~~~~~~~~~~~-~~~~~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~-~~------------------~~ 184 (480)
+|++++.|... .+.++...+|+|+|.+..+. .+++|||++|||||||.|||+|+. +. ++
T Consensus 393 ~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r 472 (817)
T PLN02974 393 YAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIE 472 (817)
T ss_pred HHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCC
Confidence 99999988755 45789999999999996542 378999999999999999999953 52 36
Q ss_pred ceEEEEcCCcccccccccccccCCCccccc--c--CCCeeEec--------------CCCCcCCC-------CCC-----
Q 011669 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNV--V--QTGVHHAL--------------NPDPYRGV-------FGA----- 234 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~--~--~~g~~~~~--------------~p~~~~~~-------~~~----- 234 (480)
.+||.++++|||.+.+++++++.+.+...+ + .....+++ +|..+++. |.+
T Consensus 473 ~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f 552 (817)
T PLN02974 473 LKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVF 552 (817)
T ss_pred CEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccc
Confidence 789999999999999999999754433211 1 11112222 22222221 110
Q ss_pred ----C----hHHHHHHHHHHHHc----cCCCceEEEEEccc-CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcc
Q 011669 235 ----D----GEMYAKDVQDLIDF----GTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301 (480)
Q Consensus 235 ----d----~~~~~~~le~~i~~----~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfg 301 (480)
+ ...+.+.+++.|+. ..++++++||+||+ ||.||+++++++|+++|+++|++||++||+|||+||||
T Consensus 553 ~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfG 632 (817)
T PLN02974 553 DKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLW 632 (817)
T ss_pred cccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCC
Confidence 0 12345677777763 23568999999995 99999999999999999999999999999999999999
Q ss_pred ccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcC------CCccccCCCcHHHHHHHHHHHHHhhhh
Q 011669 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR------RNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (480)
Q Consensus 302 r~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~------~~~~~t~~~~~~~~aaa~a~L~~i~~~ 374 (480)
|+| .+|+++++|+.|||+|++|+++|| +|+|++++++++++.+.. ..|++||++||++|++++++|++++++
T Consensus 633 RtG-~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~ 711 (817)
T PLN02974 633 RLG-VESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDP 711 (817)
T ss_pred ccc-chhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcc
Confidence 999 899999999999999999999999 699999999999998852 248899999999999999999999887
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCC-CHHHHHHHHHHHH-HcCceeeccCc
Q 011669 375 ----KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP-AKAETLYIMDKMK-EMGVLVGKGGF 448 (480)
Q Consensus 375 ----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~l~-~~Gv~v~~~~~ 448 (480)
++.++.+++++++.+.|.+...+++.+.++||.|+|++++++.+... .+ .......+.+.|+ ++||++++.
T Consensus 712 ~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~~~~~a~~v~~~~~~~~Gl~~r~~-- 788 (817)
T PLN02974 712 STNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGYSSLYARSVVRRLRREDGIYARPL-- 788 (817)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-cccchHHHHHHHHHHHHhCCEEEEec--
Confidence 45555666667777777444466899999999999999999875432 12 2234567888888 999999875
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+++||+.||++++++++++++++|++.|
T Consensus 789 -Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 -GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999876
No 67
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=1.9e-64 Score=517.40 Aligned_cols=395 Identities=26% Similarity=0.399 Sum_probs=317.3
Q ss_pred HHHHHHhhhcCCccccccCCCeEEEeeeccEEEeC-CCCEEEeccCCcccccCCCCCHHHH--HHHHHHHHhccc---cc
Q 011669 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDE-NGRRYLDAFGGIATVCCGHCHPYVV--DSIVNQIKRIQH---ST 135 (480)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~-dG~~ylD~~~g~~~~~lGh~~p~v~--~A~~~~~~~~~~---~~ 135 (480)
.+++...+|.... -++.++.+++|+|+||||. |||+||||.+|++++++||+||+|+ +|+.+|+.++.+ ..
T Consensus 3 ~~~~~~~~~~~~~---~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~ 79 (431)
T TIGR03251 3 RVHEVLSRHMLTD---GFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSN 79 (431)
T ss_pred hHHHHHHHHhhcc---CCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhccccc
Confidence 3455555554332 1222345799999999996 9999999999999999999999999 999999998743 22
Q ss_pred cccCChHHHHHHHHHHHhC-CCCCCEEEEeCCHHHHHHHHHHHHHhhcC------------CceEEEEcCCccccccccc
Q 011669 136 VLYLNHAIADFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYTG------------CNDIISLRNAYHGNAAGTM 202 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~-~~~~~~v~f~~sGseA~~~Alk~ar~~~~------------~~~ii~~~~~yhG~~~~~~ 202 (480)
..+.++...+++++|++.. +.++++|+|+||||||||.|||+||.|++ +.+||.|+++|||++.+++
T Consensus 80 ~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~al 159 (431)
T TIGR03251 80 SDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTL 159 (431)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhh
Confidence 2456888899999999986 55688999999999999999999998863 4689999999999999999
Q ss_pred ccccCCCcccc-ccCCCeeEecCCCCcCCCCCC---C-----hHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 203 GATAQSNWKFN-VVQTGVHHALNPDPYRGVFGA---D-----GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 203 ~~~~~~~~~~~-~~~~g~~~~~~p~~~~~~~~~---d-----~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
++++...++.. .+..+...++.|.. +.++.. + ...+++++++.++.. ++++++||+||+|+++|.++++
T Consensus 160 s~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~iAavivEPv~g~~G~~~~~ 237 (431)
T TIGR03251 160 SLTNTDPRKTARFPKFDWPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAER-PHDIACFIAEPIQGEGGDNHFR 237 (431)
T ss_pred hccCCccccccCCCCCCCccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHhC-CCcEEEEEEeccccCCCCcCCC
Confidence 99875433322 11112222333322 112111 1 123456677777643 5689999999999999999999
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHh----hc-CC
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV----LT-RR 348 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~----l~-~~ 348 (480)
++||++|+++|++||++||+||||+||||+| .+|+++++++.||++++||++ ++++++..+++.+. +. ..
T Consensus 238 ~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG-~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~ 312 (431)
T TIGR03251 238 PEFLRAMRALCDEHDALLIFDEVQTGVGLTG-TAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPS 312 (431)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccCccc-hHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCcc
Confidence 9999999999999999999999999999999 788999999999999999997 55556666544222 21 23
Q ss_pred CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHH
Q 011669 349 NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKA 427 (480)
Q Consensus 349 ~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~ 427 (480)
.+.+||++||+++++++++|++++++++.+++++++++++++|+++.++++ .+.+++|.|+|+++++.. ..
T Consensus 313 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~ 384 (431)
T TIGR03251 313 RLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TA 384 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HH
Confidence 477999999999999999999999889999999999999999999988888 889999999999999932 22
Q ss_pred HHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 428 ETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 428 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
....+.+.|+++||++.+.+ .+.+||+||+++|++|||+++++|+++
T Consensus 385 ~~~~~~~~l~~~Gvl~~~~g--~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 385 DRDEVIRQLYREGVLLLGCG--ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred HHHHHHHHHHhCCeEEecCC--CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 35678889999999998754 478999999999999999999999863
No 68
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=6.2e-64 Score=512.54 Aligned_cols=405 Identities=27% Similarity=0.392 Sum_probs=334.5
Q ss_pred CCHHHHHHHHhhhcCCccccc-cC-CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc
Q 011669 58 PSADEILAKRKTFLSPSLFHL-YS-KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST 135 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~-~~-~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 135 (480)
|+.+++++...+++++..... .. .++.+++++|.|+||.|||+||||++|++++++||+||+|++|+.+|++++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~ 81 (427)
T TIGR00508 2 PDTASLLAFDQRHIWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVM 81 (427)
T ss_pred CChHHHHhccccccccCccCccccCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 344556665545543321111 12 2467899999999999999999999999999999999999999999999876543
Q ss_pred c-ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCC
Q 011669 136 V-LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQS 208 (480)
Q Consensus 136 ~-~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~ 208 (480)
. .+.++...+++++|++..|.++++|+|++||+||++.|+|+||.++ ++.+||+|+++|||.+.+++++++..
T Consensus 82 ~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~ 161 (427)
T TIGR00508 82 FGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPE 161 (427)
T ss_pred ccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCc
Confidence 3 3568889999999999998878999999999999999999999884 57899999999999999999987742
Q ss_pred C-cccccc--CCCeeEecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCceEEEEEccc-CCCCcceeCCCChHHHHHHH
Q 011669 209 N-WKFNVV--QTGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 209 ~-~~~~~~--~~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l 283 (480)
. ++.... .+++..++.|.. +.++|+ ..++++++++++.. .+++++||+||+ |++||.++++++||++|+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~l 237 (427)
T TIGR00508 162 NSMHSLYKGYLPEQIFAPAPQNRFDEEWN---EEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQAL 237 (427)
T ss_pred ccccccccccCCCCeEcCCCCccccchhH---HHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHH
Confidence 2 221111 134445544432 122221 12356777777643 457999999997 99999999999999999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCC-----CccccCCCc
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFNTFGGN 357 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~-----~~~~t~~~~ 357 (480)
|++||+++|+||||+||||+| .+|+++++++.||++++||+++|| +|++++++++++++.+... .+..||++|
T Consensus 238 c~~~~~llI~DEv~tG~Gr~G-~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~ 316 (427)
T TIGR00508 238 CKQYDILLIADEIATGFGRTG-KLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGN 316 (427)
T ss_pred HHHcCCEEEEeccccCCCcCC-ccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcC
Confidence 999999999999999999999 788899999999999999999999 4999999999999988642 267899999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH
Q 011669 358 PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (480)
Q Consensus 358 ~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 437 (480)
|+++++++++|++++++++.+++++++++++++|+++. .++.+..++|.|+++++++..+. ....+.+.|+
T Consensus 317 p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~-~~~~i~~vrg~G~~~~i~~~~~~--------~~~~~~~~l~ 387 (427)
T TIGR00508 317 PLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR-KNPVVKDVRVLGAIGVVEMYKPV--------NVEELQKKFV 387 (427)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh-cCCCEEeEeccccEEEEEECCcc--------CHHHHHHHHH
Confidence 99999999999999988999999999999999999985 46667899999999999995321 1356888999
Q ss_pred HcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 438 EMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 438 ~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++||++.+.+ +.+|++||+++|++|||+++++|++++++
T Consensus 388 ~~Gv~~~~~~---~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 388 EQGVWIRPFG---KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred HCCeEEEecC---CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 9999997653 68999999999999999999999999875
No 69
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=6.7e-64 Score=510.66 Aligned_cols=382 Identities=28% Similarity=0.491 Sum_probs=328.9
Q ss_pred CHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc
Q 011669 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~ 138 (480)
++++++++..++..+. +.+.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+
T Consensus 3 ~~~~~~~~~~~~~~~~---~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~ 79 (396)
T PRK04073 3 KSEKIIELTNHYGAHN---YHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79 (396)
T ss_pred hHHHHHHHHHHhcccc---cCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccccc
Confidence 5667888777775443 3456899999999999999999999999999999999999999999999999987665556
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh--------cCCceEEEEcCCcccccccccccccCCCc
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 210 (480)
.++...+|+++|++..+ .++++|++||+|||+.|||+||.+ +++++||+++++|||++.+++++++.+.+
T Consensus 80 ~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred CCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 78888999999999875 468999999999999999999987 57789999999999999999998876544
Q ss_pred cccccC--CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC
Q 011669 211 KFNVVQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG 288 (480)
Q Consensus 211 ~~~~~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g 288 (480)
+..... +++..++++ | .+++++.++ +++++||+||++|++|.+.++++|+++|+++|++||
T Consensus 158 ~~~~~~~~~~~~~~~~~---------d----~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 158 KRGFGPMLPGIKKIPYG---------D----LEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred ccCCCCCCCCceEeCCC---------C----HHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 332211 344444332 2 467777764 368999999999999999888899999999999999
Q ss_pred CEEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHH
Q 011669 289 GLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
+++|+||+|+||||+| .+++++..++.||+++|||++|+| +|+||+++++++++.+....+..||++||+++++++++
T Consensus 221 ~lli~DEv~~g~g~~g-~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aa 299 (396)
T PRK04073 221 VLFIADEIQTGLGRTG-KLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAA 299 (396)
T ss_pred CEEEEecchhCCCcCc-HHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999 677777889999999999999975 99999999999999887767789999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG 447 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 447 (480)
|+.++++++.++.+++++++++.|+++ .++.+..+++.|+|+++++.. ....+.+.|+++||++.+.+
T Consensus 300 L~~~~~~~l~~~~~~~~~~l~~~L~~l--~~~~i~~~~~~g~~~~~~~~~----------~~~~~~~~l~~~Gv~~~~~~ 367 (396)
T PRK04073 300 LEVLEEEKLPERSLELGEYFKEQLKEI--DNPMIKEVRGRGLFIGVELNE----------PARPYCEALKEEGLLCKETH 367 (396)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhh--cCCcccceecceEEEEEEecc----------hHHHHHHHHHHCCeEEecCC
Confidence 999888889999999999999999987 345677889999999998842 14568888999999998653
Q ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 448 FYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 448 ~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+++|||+||+++|++++++++++|++++
T Consensus 368 --~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 368 --ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred --CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999999876
No 70
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=3.6e-63 Score=508.85 Aligned_cols=414 Identities=29% Similarity=0.488 Sum_probs=352.7
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-ccC
Q 011669 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-LYL 139 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~ 139 (480)
+++.++.+++..++... ..|+++++++|+||||+||++||||.+|++++++||+||+|.+++.+|++++.|... .+.
T Consensus 5 ~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~ 82 (425)
T PRK08088 5 KSLMQRRSAAVPRGVGQ--IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLA 82 (425)
T ss_pred HHHHHHHHHhhccccCC--CCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccC
Confidence 45666665665444322 348999999999999999999999999999999999999999999999998766443 244
Q ss_pred ChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCC-Cccccc--c
Q 011669 140 NHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS-NWKFNV--V 215 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~--~ 215 (480)
++...+++++|++..|.+. ++++|++||+||+|.|||+||.++++.+||.++++|||++.+++++++.. .+.... .
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 7788899999999887554 58999999999999999999999999999999999999999999987642 233222 1
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
..++..+++|..+++ .+.+.++++++++++. ..++++++||+||+++++|.+.++++|+++|+++|++||+++|+|
T Consensus 163 ~~~~~~~~~p~~~~~---~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~D 239 (425)
T PRK08088 163 PGHVYRALYPCPLHG---VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIAD 239 (425)
T ss_pred CCCcEEcCCCccccC---ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 245566666654432 1223346678888863 224689999999999999999999999999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhh
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~ 374 (480)
|+|+||||+| .+++++..++.||+++|||++++|+|+||+++++++++.+....+..|+++||+.++++.++|+.+..+
T Consensus 240 ev~~g~g~~g-~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 240 EVQTGAGRTG-TLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred ccccCCCcCc-chhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999 677777889999999999999999999999999999999987778899999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEE
Q 011669 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFR 454 (480)
Q Consensus 375 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR 454 (480)
++.+++++.++++++.|.++..+++.+..++|.|+|+|+++..+..++.|.......+.+.|.++||++.+++.+.+.+|
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iR 398 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLR 398 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEE
Confidence 99999999999999999999888888889999999999999765544445556678899999999999988766678999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 455 ITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 455 i~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
|+||+.+|+++|++++++|++++.++
T Consensus 399 l~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 399 ILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998753
No 71
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=2.4e-65 Score=508.32 Aligned_cols=329 Identities=37% Similarity=0.638 Sum_probs=289.3
Q ss_pred EEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc-cccCChHHHHHHHHHHHhCCCCCCEEE
Q 011669 84 NVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-VLYLNHAIADFAEALASKMPGNLKVVF 162 (480)
Q Consensus 84 ~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~l~e~L~~~~~~~~~~v~ 162 (480)
+|++++|+||||.|||+||||++|++++++||+||+|.+|+++|+.++.+.. ..+.++...+|+++|.+.+|..+++|+
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 5899999999999999999999999999999999999999999999987755 456789999999999999988889999
Q ss_pred EeCCHHHHHHHHHHHHH------hhcCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCCCC
Q 011669 163 FTNSGTEANELAIMMAR------LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGA 234 (480)
Q Consensus 163 f~~sGseA~~~Alk~ar------~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~ 234 (480)
|++||+||||.|||+|| ..+++.+|+.|+++|||++.+++++++.+.++..... .++..+|+|+..+ ..
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~ 157 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA---DE 157 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH---HH
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch---hh
Confidence 99999999999999999 7789999999999999999999999877655544333 5667787776432 00
Q ss_pred ChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC
Q 011669 235 DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG 314 (480)
Q Consensus 235 d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~ 314 (480)
.......++++.+.....+++++||+||+|+++|.+.++++|+++|+++|+|||+++|+|||||||||+| ++|++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG-~~~a~~~~g 236 (339)
T PF00202_consen 158 EEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG-KFFASEHYG 236 (339)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS-SSSGHHHHT
T ss_pred hHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC-Cccceeccc
Confidence 0112234455555433356899999999999999999999999999999999999999999999999999 899999999
Q ss_pred CCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Q 011669 315 VVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 315 ~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l 394 (480)
+.||++|+||+++||+|+|++++++++++.+....+.+||++||++|++++++|+.++++++.+++++.+++++++|+++
T Consensus 237 v~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 237 VDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp SSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998878999999999999999999999999999999999999999999999
Q ss_pred HHhcCceeeEeccceeEEEEEe
Q 011669 395 KDKYGIIGDVRGRGFLLGVEFV 416 (480)
Q Consensus 395 ~~~~~~~~~v~g~g~~~~i~~~ 416 (480)
.++++.+..++|.|+|++++++
T Consensus 317 ~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 317 AARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHTTTEEEEEEETTEEEEEES
T ss_pred HHhCCCeEEEeeeCeEEEEEEE
Confidence 9999999999999999999985
No 72
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.3e-63 Score=503.42 Aligned_cols=369 Identities=36% Similarity=0.564 Sum_probs=324.5
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+.+++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.+....+.++...+++++|++..+ .+
T Consensus 12 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 89 (389)
T PRK01278 12 RADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--AD 89 (389)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CC
Confidence 4589999999999999999999999999999999999999999999999987665555678899999999999874 46
Q ss_pred EEEEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCcccccc--CCCeeEecCCCCcCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV--QTGVHHALNPDPYRGV 231 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~--~~g~~~~~~p~~~~~~ 231 (480)
+|+|++||+|||+.|+|++|.+ +++++||+++++|||++.+++.+++.+.+..... ..++..++++
T Consensus 90 ~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 163 (389)
T PRK01278 90 KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFG------ 163 (389)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCC------
Confidence 8999999999999999999987 5677999999999999999998887654432221 1233333322
Q ss_pred CCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
| .++++++++ +++++|++||+||++|.+.++++++++|+++|++||+++|+||||+||||+| .+++++
T Consensus 164 ---d----~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 231 (389)
T PRK01278 164 ---D----IEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG-KLFAHE 231 (389)
T ss_pred ---C----HHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-cceeec
Confidence 2 567887774 3799999999999999888999999999999999999999999999999999 677777
Q ss_pred ccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
.+++.||++||||++++|+|+||+++++++++.+....+..||++||+++++++++|+.++++++.+++++++++++++|
T Consensus 232 ~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l 311 (389)
T PRK01278 232 WAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKL 311 (389)
T ss_pred ccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999888777889999999999999999999988888999999999999999
Q ss_pred HHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHH
Q 011669 392 TALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 392 ~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l 470 (480)
+++.++++ .+..+++.|+++++++..+ ...+++.|+++||++.|++ .+++||+||++++++++++++
T Consensus 312 ~~l~~~~~~~~~~v~g~G~~~~i~~~~~----------~~~~~~~l~~~GV~~~p~~--~~~lR~~p~~~~~~~~i~~~l 379 (389)
T PRK01278 312 EGLVDRFPDVIEEVRGKGLLLGLKCVVP----------NRDLVQALRDEGLLTVGAG--DNVVRLLPPLIITEEEIDEAL 379 (389)
T ss_pred HHHHhhCCCceeeEecccEEEEEEEecC----------HHHHHHHHHHCCeEEeecC--CCEEEEeCCcccCHHHHHHHH
Confidence 99877776 7888999999999988431 4678889999999999875 578999999999999999999
Q ss_pred HHHHHHHhhC
Q 011669 471 DVMDYSLSKM 480 (480)
Q Consensus 471 ~~l~~~l~~~ 480 (480)
++|+++++++
T Consensus 380 ~~l~~~l~~~ 389 (389)
T PRK01278 380 ERLERAAESL 389 (389)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 73
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.1e-62 Score=506.13 Aligned_cols=407 Identities=25% Similarity=0.389 Sum_probs=333.7
Q ss_pred CHHHHHHHHhhhcCCcccc---cc----CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhc
Q 011669 59 SADEILAKRKTFLSPSLFH---LY----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI 131 (480)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~---~~----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~ 131 (480)
++.+++++.+++++.+... ++ +.|+++++|+|+||||.|||+||||.+|++++++||+||+|++|+++|++++
T Consensus 1 ~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG 80 (423)
T ss_pred CcHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC
Confidence 3567888888888655421 12 4589999999999999999999999999999999999999999999999986
Q ss_pred cccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcc
Q 011669 132 QHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (480)
Q Consensus 132 ~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 211 (480)
.+ ..++++...+|+++|++.++.. ++|+|++||+||++.|+|+||.++++++||+++++|||++...+..++.....
T Consensus 81 ~~--~~~~~~~~~~lae~l~~~~~~~-~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~ 157 (423)
T TIGR00713 81 TS--YGAPTEAEILLAKEIISRVPSV-EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAAT 157 (423)
T ss_pred Cc--CCCCCHHHHHHHHHHHHhCCcc-cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccc
Confidence 43 2356788999999999999753 78999999999999999999999999999999999999988777765432111
Q ss_pred ccccC-CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCE
Q 011669 212 FNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (480)
Q Consensus 212 ~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 290 (480)
...+. +++.....++.++.+++ | .++++++++.. ++++++||+||+++++|.+.++++|+++|+++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-d----~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 231 (423)
T TIGR00713 158 LGLPTSPGVPEDFAKLTLVLPYN-D----LEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSL 231 (423)
T ss_pred cCCCCCCCCCcccccceEEeCCC-C----HHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 11111 11111111222233332 3 57788888643 358999999999999998888889999999999999999
Q ss_pred EEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC---CCccccCCCcHHHHHHHHHH
Q 011669 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 291 lI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~---~~~~~t~~~~~~~~aaa~a~ 367 (480)
+|+||||+|| |+| ..++++++++.||++||||++++|+|+||+++++++++.+.. ..+++||++||++|++++++
T Consensus 232 lI~DEv~~g~-r~g-~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~ 309 (423)
T TIGR00713 232 LIFDEVMTGF-RVA-LGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLAT 309 (423)
T ss_pred EEEEcccccc-ccC-cchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHH
Confidence 9999999999 888 566677889999999999999999999999999999998864 23678999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCc-----CCCCHHHHHHHHHHHHHcCce
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKEMGVL 442 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv~ 442 (480)
|+.++++++.++++++++++++.|.++.++++.+..+++.|+|+++++..+... ..++......+.+.|+++||+
T Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 389 (423)
T TIGR00713 310 LKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVF 389 (423)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeE
Confidence 999988889999999999999999999888988889999999999998653211 112233455788899999999
Q ss_pred eeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 443 VGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 443 v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
+.+++ .+.+||+|+ +|+++|++++++|+++++++
T Consensus 390 v~~~~--~~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 390 LPPSQ--FEACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred EecCC--ccceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 87653 246899976 79999999999999999764
No 74
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.7e-61 Score=495.98 Aligned_cols=408 Identities=25% Similarity=0.391 Sum_probs=335.0
Q ss_pred CCHHHHHHHHhhhcCCcccc-------ccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHh
Q 011669 58 PSADEILAKRKTFLSPSLFH-------LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130 (480)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~ 130 (480)
+++++++++.++++..+... +...|+.+++++|+|+||.|||+||||.+|+++.++||+||+|++|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 57889999998887644311 12347899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCc
Q 011669 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW 210 (480)
Q Consensus 131 ~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~ 210 (480)
.. ...+.++...+|+++|++.++. .++|+|++||+|||+.|+|+++.++++++||+++++|||++.++...++....
T Consensus 82 ~~--~~~~~~~~~~~la~~L~~~~~~-~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~ 158 (426)
T PRK00062 82 GL--SFGAPTELEVELAELVIELVPS-IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAA 158 (426)
T ss_pred CC--cCCCCCHHHHHHHHHHHHhCCC-CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCcccc
Confidence 53 2345688889999999999874 67899999999999999999999999999999999999999887776543221
Q ss_pred cccccC-CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 211 KFNVVQ-TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 211 ~~~~~~-~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
....+. .++.....+..++.+++ | .+++++.++.. .+++++||+||+++++|.+.++++||++|+++|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-d----~~~l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~ 232 (426)
T PRK00062 159 TLGLPDSPGVPEDFAKHTLTAPYN-D----LEAVEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGA 232 (426)
T ss_pred ccCCCCCCCCCcccccceEEcCCC-C----HHHHHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 111111 11111001112222332 3 56788777643 45899999999999999999899999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcC---CCccccCCCcHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR---RNYFNTFGGNPVCTAAGHA 366 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~---~~~~~t~~~~~~~~aaa~a 366 (480)
++|+||||+|| |+| .++..+++++.||+++|||++++|+|+|++++++++++.+.. ..+++|+++||++++++++
T Consensus 233 llI~DEv~~G~-r~g-~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a 310 (426)
T PRK00062 233 LLIFDEVMTGF-RVA-LGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLA 310 (426)
T ss_pred EEEEeechhcc-ccC-CccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHH
Confidence 99999999999 888 577777889999999999999999999999999999998853 2356899999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCc-----CCCCHHHHHHHHHHHHHcCc
Q 011669 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL-----KTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 367 ~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gv 441 (480)
+|+.++++++.+++++++++++++|+++.++++.+.++++.|+|+++++..+... +.++......+.+.|+++||
T Consensus 311 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv 390 (426)
T PRK00062 311 TLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGV 390 (426)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCe
Confidence 9999988889999999999999999999888998899999999999999754211 12333445778999999999
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
++.+.+ .+.++++ +++|++||++++++|+++++++
T Consensus 391 ~v~~~~--~~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 391 YLAPSQ--FEAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EeecCC--cCceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 998754 2456664 8999999999999999998753
No 75
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.3e-60 Score=487.57 Aligned_cols=372 Identities=31% Similarity=0.542 Sum_probs=320.9
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++.+++|+|+||.||++||||++|+++.+|||+||+|.+|+.+++++..+....+.++...+++++|++..+ .+
T Consensus 21 ~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~ 98 (403)
T PRK05093 21 PAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AE 98 (403)
T ss_pred CCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CC
Confidence 5589999999999999999999999999999999999999999999999986554444567788899999999874 46
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGV 231 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~ 231 (480)
+++|++||+|||+.|+|++|.++ ++.+||+++++|||++.+++++++.+.+...... .++.++++
T Consensus 99 ~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 171 (403)
T PRK05093 99 RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF------- 171 (403)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------
Confidence 89999999999999999999885 6789999999999999998888765433322211 23333332
Q ss_pred CCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc
Q 011669 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 232 ~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
+| .+++++.+. +++++|++||+|+++|.+.++++|+++|+++|++||+++|+||||+|||++| .+++++
T Consensus 172 --~d----~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g-~~~~~~ 240 (403)
T PRK05093 172 --ND----LAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-DLFAYM 240 (403)
T ss_pred --CC----HHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc-cchhhh
Confidence 23 567777774 3799999999999999998899999999999999999999999999999999 666677
Q ss_pred ccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 312 ~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
.+++.||+++|||++++|+|+||+++++++++.+....+..|++++|+.+++++++|+.+.++++.++++++++++++.|
T Consensus 241 ~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 241 HYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred hcCCCCCEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999988767778999999999999999999887888999999999999999
Q ss_pred HHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHH
Q 011669 392 TALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+++..+++.+..+++.|+++|+++.... ......+++.|+++||++.+++ .+++||+|++++++++|+++++
T Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~~~~~~~~~~i~~~~~ 392 (403)
T PRK05093 321 QKINQKYGVFSEIRGMGLLIGAELKPQY------KGRARDFLNAAAEEGVMVLVAG--PDVLRFAPSLVIEEADIDEGLA 392 (403)
T ss_pred HHHHhhCCCeEeEeeCceEEEEEecCcc------hhHHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHH
Confidence 9987667777889999999999985320 1235678899999999998754 4789999999999999999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|++++.+
T Consensus 393 ~l~~~l~~ 400 (403)
T PRK05093 393 RFEKAVAK 400 (403)
T ss_pred HHHHHHHH
Confidence 99998865
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=8.1e-60 Score=481.59 Aligned_cols=384 Identities=34% Similarity=0.564 Sum_probs=327.0
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC
Q 011669 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN 140 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~ 140 (480)
.+.++...+++.+. +...|+++.+++|.|+||.|||+||||.+|+++++|||+||+|.+|+.+++++..+....|.+
T Consensus 8 ~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~ 84 (398)
T PRK03244 8 AELLQRWQAVMMNN---YGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT 84 (398)
T ss_pred HHHHHHHHHHhhhh---ccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC
Confidence 34555545555443 224579999999999999999999999999999999999999999999999987665556778
Q ss_pred hHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC--C
Q 011669 141 HAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--T 217 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~ 217 (480)
+...+|+++|++.++.. .++++|++||+||++.|+++++. +++++||.++++|||++..++.+++...+...... .
T Consensus 85 ~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 85 EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCC
Confidence 88899999999998743 47899999999999999999987 57889999999999999999888764433222211 2
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 297 (480)
++..++++ | .+++++++. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|
T Consensus 164 ~~~~~~~~---------d----~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 226 (398)
T PRK03244 164 GVEHVPYG---------D----VDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQ 226 (398)
T ss_pred CceEeCCC---------C----HHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 23333221 2 567777763 479999999999999999999999999999999999999999999
Q ss_pred cCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHH
Q 011669 298 AGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQ 377 (480)
Q Consensus 298 tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~ 377 (480)
+||||+| .+++++.+++.||++||||++++|+|+||+++++++++.+....+..||++||+++++++++|+.++++++.
T Consensus 227 ~g~gr~g-~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~ 305 (398)
T PRK03244 227 TGIGRTG-AWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLL 305 (398)
T ss_pred cCCcccc-hHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 9999999 677778889999999999999999999999999999998877668899999999999999999998888899
Q ss_pred HHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeC
Q 011669 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITP 457 (480)
Q Consensus 378 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p 457 (480)
++++++++++++.|+++ .++.+..+++.|+++++++..+ ....+.+.|+++||++.+.+ .+++||+|
T Consensus 306 ~~~~~~~~~l~~~L~~~--~~~~~~~v~g~g~~~~i~~~~~---------~~~~~~~~l~~~Gv~~~~~~--~~~iR~~p 372 (398)
T PRK03244 306 ENAERLGEQLRAGIEAL--GHPLVDHVRGRGLLLGIVLTAP---------VAKAVEAAAREAGFLVNAVA--PDVIRLAP 372 (398)
T ss_pred HHHHHHHHHHHHHHHhc--CCCceeeEeeccEEEEEEEecc---------HHHHHHHHHHHCCeEEeecC--CCEEEEEC
Confidence 99999999999999887 4677788999999999998421 24678899999999998754 48899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 011669 458 PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+|++||++++++|++++++
T Consensus 373 ~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 373 PLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred CCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999875
No 77
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-59 Score=477.07 Aligned_cols=366 Identities=37% Similarity=0.624 Sum_probs=317.1
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+.+++++|.|+||+|||+||||.+|+++.+|||+||+|++|+.+++++..+.+..+.++...+++++|.+..+ .+
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~ 87 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA--GD 87 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC--CC
Confidence 4578999999999999999999999999999999999999999999999987555555667888999999998875 36
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCCCCChH
Q 011669 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE 237 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~ 237 (480)
.++|++||+|||+.|+++++.++++++||+++++|||++...+.+++...++..... .++..++.+ |
T Consensus 88 ~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------d-- 156 (377)
T PRK02936 88 LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN---------D-- 156 (377)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC---------C--
Confidence 899999999999999999999999999999999999999999988765433222211 222333221 3
Q ss_pred HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCc
Q 011669 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP 317 (480)
Q Consensus 238 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~p 317 (480)
.+++++.+. +++++|++||+++++|.++++++|+++|+++|++||+++|+||||+|||++| .+++++.+++.|
T Consensus 157 --~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g-~~~~~~~~~~~~ 229 (377)
T PRK02936 157 --IKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG-TLFAYEQFGLDP 229 (377)
T ss_pred --HHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-hhhHHHhhCCCC
Confidence 467777774 3689999999999999998899999999999999999999999999999999 676777788999
Q ss_pred ceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHh
Q 011669 318 DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK 397 (480)
Q Consensus 318 Divt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~ 397 (480)
|++||||++++|+|+||+++++++++.+....+..|+++||++++++.++|+.+..+++.++++++++++++.|+++..+
T Consensus 230 di~t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 309 (377)
T PRK02936 230 DIVTVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEH 309 (377)
T ss_pred cEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999988777788999999999999999999877788999999999999999997667
Q ss_pred cCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 398 YGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 398 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
++.+..+++.|+++++++..+ ...+.+.|+++||++.+++ .+++||+||+.++++++++++++|++++
T Consensus 310 ~~~~~~v~~~g~~~~i~~~~~----------~~~~~~~l~~~gv~v~~~g--~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 310 LECVKNIRGKGLMIGIECTEE----------VAPVIEQLREEGLLVLSAG--PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCcEEeEeecceEEEEEecch----------HHHHHHHHHHCCeEEecCC--CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 788888899999999998431 4568888999999998865 4789999999999999999999998764
No 78
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=6.7e-59 Score=474.85 Aligned_cols=389 Identities=28% Similarity=0.485 Sum_probs=327.3
Q ss_pred HHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC
Q 011669 61 DEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN 140 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~ 140 (480)
++++++..+|.... +.+.|+.+.+++|+|+||.||++||||.+|+++.++||+||+|++|+.++++++.+....+.+
T Consensus 2 ~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~ 78 (401)
T TIGR01885 2 EEAIERENKYGAHN---YHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYN 78 (401)
T ss_pred hhHHHHHHHhhhcc---cCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCC
Confidence 35666666664332 335578899999999999999999999999999999999999999999999987665555568
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh--------cCCceEEEEcCCcccccccccccccCCCccc
Q 011669 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...+++++|++.++ .++++|++||+|||+.||+++|.+ +++..|++++++|||++.+++++++.+.++.
T Consensus 79 ~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 79 DVFGEFAEYVTKLFG--YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred HHHHHHHHHHHhhcC--CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 889999999999985 478999999999999999999886 3578899999999999999999876543332
Q ss_pred cccC--CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCE
Q 011669 213 NVVQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (480)
Q Consensus 213 ~~~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 290 (480)
.+.. .++..++.+ | .++++++++.. ++++++|++||+++++|.+.++++||++|+++|++||++
T Consensus 157 ~~~~~~~~~~~~~~~---------d----~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~l 222 (401)
T TIGR01885 157 NFGPYVPGFKKIPYN---------N----LEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVL 222 (401)
T ss_pred ccCCCCCCceEeCCC---------C----HHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 2211 233333322 3 57788888653 357999999999999999998889999999999999999
Q ss_pred EEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 291 lI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
+|+||||+||||+| .+++++..++.||++++||++++| +|+|++++++++++.+....+..||++||++++++.++|+
T Consensus 223 li~DEv~~g~g~~G-~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 223 LIADEIQTGLGRTG-KLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred EEEechhhCCCccc-hhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999 677777788999999999999976 8999999999999988765677899999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY 449 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 449 (480)
.++++++.++++++++++++.|+++ .++.+..+++.|+|+.+++..+.. ......+.+.|.++||++.+.+
T Consensus 302 ~i~~~~l~~~~~~~~~~~~~~L~~l--~~~~~~~~~g~g~~~~i~~~~~~~-----~~~~~~l~~~l~~~Gv~v~~~~-- 372 (401)
T TIGR01885 302 VLEEEKLAENAEKLGEIFRDQLKKL--PKPIITEVRGRGLLNAIVIDESKT-----GRTAWDLCLKLKEKGLLAKPTH-- 372 (401)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHhc--cCCceeEEeecCeeEEEEeccCcc-----hhHHHHHHHHHHhCCEEEEecC--
Confidence 9988788899999999999999988 346677889999999998843210 1245778899999999998765
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 450 GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 450 ~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+.+||+||+.+|+++|++++++|++++.
T Consensus 373 ~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 373 GNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999998763
No 79
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=8.5e-58 Score=467.14 Aligned_cols=385 Identities=29% Similarity=0.492 Sum_probs=324.0
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC
Q 011669 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~ 139 (480)
++++++....+.... +++.|+.+.+++|+|+||+||++||||++|++++++||+||+|.+|+.+|++++.+....+.
T Consensus 5 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~ 81 (401)
T PRK00854 5 SEDLIATEQRLGAHN---YKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFR 81 (401)
T ss_pred CHHHHHHHhhhhhcc---cCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccC
Confidence 456776555443222 34568899999999999999999999999999999999999999999999999877655566
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh--------cCCceEEEEcCCcccccccccccccCCCcc
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWK 211 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~ 211 (480)
++...+|+++|++..+. ++++|++||+|||+.||+++|.+ +++++||++.++|||++..+++++..+.++
T Consensus 82 ~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~ 159 (401)
T PRK00854 82 NDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDAR 159 (401)
T ss_pred CHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccc
Confidence 88899999999999864 68999999999999999999876 356799999999999999888777654433
Q ss_pred cccc--CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC
Q 011669 212 FNVV--QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 212 ~~~~--~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
.... ..++..++.+ | .+++++.+. +++++|++||++|++|.+.++++||++|+++|++||+
T Consensus 160 ~~~~~~~~~~~~~~~~---------d----~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi 222 (401)
T PRK00854 160 GGFGPFTPGFRVVPFG---------D----AEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNV 222 (401)
T ss_pred ccCCCCCCCeEEeCCC---------C----HHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 2222 1345444432 2 567887774 3789999999999999999889999999999999999
Q ss_pred EEEEcccccCccccCCCcccccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 290 LCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
++|+||+|+|||++| .+++.+..++.||++++||++++| +|+|++++++++++.+....+..||++||+++++++++|
T Consensus 223 ~lI~DEv~~g~g~~g-~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L 301 (401)
T PRK00854 223 TLILDEIQTGLGRTG-KLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAAL 301 (401)
T ss_pred EEEEechhhCCCCCc-hHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999 566667788999999999999988 699999999999998876667789999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 448 (480)
+.++++++.++++++++++++.|+++. ...+..+++.|.|+.+++..+. .....+.+.|+++||++.+.+
T Consensus 302 ~~l~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~g~g~~~~i~~~~~~-------~~~~~~~~~L~~~GV~v~~~~- 371 (401)
T PRK00854 302 KVLTEEGMIENAAEMGAYFLEGLRSIR--SNIVREVRGRGLMLAVELEPEA-------GGARQYCEALKERGLLAKDTH- 371 (401)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHhhc--cCceEEEeccceEEEEEEecCc-------hhHHHHHHHHHHCCeEEecCC-
Confidence 998877789999999999999998873 3445678899999998885431 135678899999999997643
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+++||+|++.+|+++|++++++|++++.
T Consensus 372 -~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 372 -DHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -CCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 47999999999999999999999999874
No 80
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-57 Score=464.99 Aligned_cols=385 Identities=37% Similarity=0.614 Sum_probs=329.3
Q ss_pred HHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC
Q 011669 60 ADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~ 139 (480)
+.++.+..+.++... +.+.|+++++++|+++||.|||+||||.+|++++++||+||+|.+|+.+++++..+....|.
T Consensus 3 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~ 79 (396)
T PRK02627 3 SEAIIELEKKYLMNT---YGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYY 79 (396)
T ss_pred HHHHHHHHHHhhccc---ccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccC
Confidence 456666666665443 23558999999999999999999999999999999999999999999999988766555677
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCC-----ceEEEEcCCcccccccccccccCCCccccc
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-----NDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~-----~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
++...+++++|++.. +.++++|++||+||++.|+++++.++++ ++|++++++|||++..++..++...++...
T Consensus 80 ~~~~~~la~~l~~~~--~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 157 (396)
T PRK02627 80 IEPQEELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF 157 (396)
T ss_pred CHHHHHHHHHHHhhc--CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC
Confidence 899999999999986 4589999999999999999999988776 789999999999999998887654332221
Q ss_pred cC--CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 215 VQ--TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 215 ~~--~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
.. .++..++. +| .+++++++. +++++|++||+++++|..+++++++++|+++|++||+++|
T Consensus 158 ~~~~~~~~~~~~---------~d----~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI 220 (396)
T PRK02627 158 EPLVEGFIYVPF---------ND----IEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLI 220 (396)
T ss_pred CCCCCCceEeCC---------CC----HHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 11 23332222 13 567777773 4799999999999999888899999999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~ 372 (480)
+||+|+|||++| .+++++..++.||+++|||++++|+|+||+++++++++.+....+..||++|+++++++.++|+.++
T Consensus 221 ~DE~~~g~g~~g-~~~~~~~~~~~pdi~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~ 299 (396)
T PRK02627 221 LDEVQTGMGRTG-KLFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIE 299 (396)
T ss_pred EechhcCCCccC-ceeeehhcCCCCCEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999 6777777899999999999999999999999999999988776678999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCE
Q 011669 373 KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNV 452 (480)
Q Consensus 373 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~ 452 (480)
++++.+++++++++++++|.++..+++.+..+++.|+++++++.. ....+++.|+++||++.+++ .++
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~l~~~Gv~v~~~~--~~~ 367 (396)
T PRK02627 300 EEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR----------PAAEIVKKALEKGLLINVTG--DNV 367 (396)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC----------cHHHHHHHHHHCCeEEeecC--CCE
Confidence 888999999999999999999887777777889999999998821 14678889999999998865 478
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 453 FRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 453 iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+||+|++.++++++++++++|++++++
T Consensus 368 lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 368 LRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred EEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999875
No 81
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.6e-57 Score=465.22 Aligned_cols=374 Identities=29% Similarity=0.498 Sum_probs=317.5
Q ss_pred cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC
Q 011669 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
.+.|+++.+++|+|+||.|||+||||++|++++++||+||+|.+|+.++++++.+.+..+.++...++++.|++..+ .
T Consensus 11 ~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~ 88 (400)
T PTZ00125 11 HPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFG--Y 88 (400)
T ss_pred CCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCC--C
Confidence 34578999999999999999999999999999999999999999999999988776555557777788888887763 5
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhh--------cCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCc
Q 011669 159 KVVFFTNSGTEANELAIMMARLY--------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPY 228 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~--------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~ 228 (480)
++++|++||+|||+.||++++.+ +++++||+++++|||.+.+.+..++...+...... .++..+++
T Consensus 89 ~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 164 (400)
T PTZ00125 89 DKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY---- 164 (400)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC----
Confidence 78999999999999999999854 14678999999999999999988764332211111 23333322
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcc
Q 011669 229 RGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308 (480)
Q Consensus 229 ~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~ 308 (480)
+| +++++++++ .+++++|++||+++++|.+.++++|+++|+++|++||+++|+||||+|||++| .++
T Consensus 165 -----~d----~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G-~~~ 231 (400)
T PTZ00125 165 -----ND----VEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG-KLL 231 (400)
T ss_pred -----CC----HHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhh
Confidence 13 578888885 24799999999999999998889999999999999999999999999999999 666
Q ss_pred cccccCCCcceeeeccccccC-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 011669 309 GFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387 (480)
Q Consensus 309 ~~~~~~~~pDivt~sK~~g~G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l 387 (480)
..+.+++.||++++||++++| +|+||+++++++++.+....+..|++++|+.++++.++|+.+.++++.++++++++++
T Consensus 232 ~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l 311 (400)
T PTZ00125 232 AHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVF 311 (400)
T ss_pred HHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 677788999999999999988 5999999999999988766677899999999999999999988888899999999999
Q ss_pred HHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHH
Q 011669 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467 (480)
Q Consensus 388 ~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id 467 (480)
+++|+++...++.+..+++.|+++++++..+ .......+.+.|+++||++.+++ ++++||+|++++++++++
T Consensus 312 ~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~------~~~~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~~~~~i~ 383 (400)
T PTZ00125 312 RDGLKELLKKSPWVKEIRGKGLLNAIVFDHS------DGVNAWDLCLKLKENGLLAKPTH--DNIIRFAPPLVITKEQLD 383 (400)
T ss_pred HHHHHHHHhcCCCeEEEecccEEEEEEEccC------cchHHHHHHHHHHHCCeEEeecC--CCEEEEECCccCCHHHHH
Confidence 9999998767777778899999999988431 12245678889999999998864 579999999999999999
Q ss_pred HHHHHHHHHHhh
Q 011669 468 YLVDVMDYSLSK 479 (480)
Q Consensus 468 ~~l~~l~~~l~~ 479 (480)
+++++|++++++
T Consensus 384 ~~l~~l~~~l~~ 395 (400)
T PTZ00125 384 QALEIIKKVLKS 395 (400)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 82
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.7e-57 Score=466.09 Aligned_cols=387 Identities=21% Similarity=0.286 Sum_probs=306.2
Q ss_pred HHHHHHHhhhcCCccccc---c-----CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc
Q 011669 61 DEILAKRKTFLSPSLFHL---Y-----SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132 (480)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~---~-----~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~ 132 (480)
.++.++..++++.+...+ + ..|+++++|+|+|+||.|||+||||.+|++++++||+||+|++|+.+|++++.
T Consensus 2 ~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~ 81 (431)
T PRK06209 2 QLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC 81 (431)
T ss_pred HHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc
Confidence 467778888876554321 1 24789999999999999999999999999999999999999999999999875
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEE-cCCcccccccccccccCCCcc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL-RNAYHGNAAGTMGATAQSNWK 211 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~-~~~yhG~~~~~~~~~~~~~~~ 211 (480)
+ ....+....+|+++|++.+|. .++|+|+||||||||.|+|+||.++++.+|+.+ .++|||+..+....+....
T Consensus 82 ~--~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~-- 156 (431)
T PRK06209 82 N--FTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSA-- 156 (431)
T ss_pred C--CCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCC--
Confidence 3 223455566899999999874 578999999999999999999999999999999 7888875433322111000
Q ss_pred ccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEE
Q 011669 212 FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291 (480)
Q Consensus 212 ~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gill 291 (480)
..+. .... .....++ +| +++++++++.. ++++++||+||++++ .++++||++|+++|++||+++
T Consensus 157 -~~~~-~~~~----~~~~~~~-~d----~~~l~~~l~~~-~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lL 220 (431)
T PRK06209 157 -GIPA-SVSA----LTVTFRY-ND----IASLEALFEDH-PGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALF 220 (431)
T ss_pred -CCCh-hHhc----cccccCC-CC----HHHHHHHHHhC-CCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEE
Confidence 0000 0000 0111122 23 57788888643 458999999999876 678999999999999999999
Q ss_pred EEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHh--hc----CC--CccccCCCcHHHHHH
Q 011669 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV--LT----RR--NYFNTFGGNPVCTAA 363 (480)
Q Consensus 292 I~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~--l~----~~--~~~~t~~~~~~~~aa 363 (480)
|+||||+||++++ .+..+++++.||++|+||++|+|+|+|++++++++++. +. .. .+.+|+++||++|++
T Consensus 221 I~DEv~tG~~~~~--~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aa 298 (431)
T PRK06209 221 ILDEMITGFRWHM--RGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAA 298 (431)
T ss_pred EEEcccccCCcCc--chhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHH
Confidence 9999999997754 22233579999999999999999999999999999986 31 11 267899999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCcee
Q 011669 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLV 443 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v 443 (480)
++++|++++++++.++++++++++++.|+++..+++.+.++++.|.++.+.++.......+.......+.+.|+++|+++
T Consensus 299 a~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~ 378 (431)
T PRK06209 299 AIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM 378 (431)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccc
Confidence 99999999999999999999999999999998889988899999999988887543222343444457888899999987
Q ss_pred eccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 444 GKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 444 ~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
. .++|+ ..+|++||++++++|++++++
T Consensus 379 p-------~l~is--~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 379 P-------SLVVS--YAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred c-------ccccc--ccCCHHHHHHHHHHHHHHHHH
Confidence 2 14454 688999999999999998864
No 83
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-56 Score=452.93 Aligned_cols=364 Identities=33% Similarity=0.555 Sum_probs=308.9
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++++++|+||||.||++||||.+|++.+++|| ||+|.+|+.++++++.+....+.++...++++.|... ...
T Consensus 10 ~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~---~~~ 85 (375)
T PRK04260 10 RAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD---KDY 85 (375)
T ss_pred CCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC---cCC
Confidence 347899999999999999999999999999999999 9999999999998865544445566667777766542 124
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCCCCChH
Q 011669 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE 237 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~~ 237 (480)
.++|++||+|||+.|++++|.++++++||+++++|||++..+++.++...+...... ..+...+ + +|
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~d-- 154 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI--------F-ND-- 154 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC--------C-CC--
Confidence 679999999999999999999999999999999999999999888764433221111 1111111 1 23
Q ss_pred HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCc
Q 011669 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP 317 (480)
Q Consensus 238 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~p 317 (480)
.+++++.++ +++++|++||+++++|.+.++++||++++++|+++|+++|+||+|+|||++| .++.++.+++.|
T Consensus 155 --l~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g-~~~~~~~~~~~p 227 (375)
T PRK04260 155 --LNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG-KLYAFEHYGIEP 227 (375)
T ss_pred --HHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc-chhhhHhhCCCC
Confidence 567777663 3789999999999999999899999999999999999999999999999999 676777789999
Q ss_pred ceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHh
Q 011669 318 DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK 397 (480)
Q Consensus 318 Divt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~ 397 (480)
|++||||++++|+|+||+++++++++.+....+.+||++||++++++.++|+.++.+++.+++++.++++++.|.++..+
T Consensus 228 di~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 307 (375)
T PRK04260 228 DIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD 307 (375)
T ss_pred CEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999887767889999999999999999999988899999999999999999998888
Q ss_pred cCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 398 YGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 398 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
++.+..+++.|+++|+++..+ ...+.+.|+++||++.+.+ .+.+||+||+.+|++|+++++++|++++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~~~Gi~v~~~~--~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 308 KETVTTVRGLGYMIGIETTAD----------LSQLVEAARDKGLIVLTAG--TNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred CCCeeEEeccceEEEEEecCc----------HHHHHHHHHhCCCEEecCC--CCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 877788999999999998321 4568899999999998764 4789999999999999999999998763
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=6.1e-56 Score=455.51 Aligned_cols=392 Identities=42% Similarity=0.677 Sum_probs=326.5
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc-cCChHHHHHHHHHHHhCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-YLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~-~~~~~~~~l~e~L~~~~~~~~ 158 (480)
+.|+++.+++|.++||.||++||||.+|++.+++||+||+|.+|+.+++.+..+.... +.++...+++++|++.++.+.
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL 96 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC
Confidence 4689999999999999999999999999999999999999999999999876543322 257889999999999998667
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCCCCCh
Q 011669 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADG 236 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~~~d~ 236 (480)
++++|++||+||++.|+++++.++++++|++++++|||++...+..++...+...... ..+..++.+...+.. .+.
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 174 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP--AEL 174 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccch--hhH
Confidence 8999999999999999999998899999999999999999999888764423222111 233444433211100 112
Q ss_pred HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCC
Q 011669 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV 316 (480)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~ 316 (480)
...+++++++++.. ++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+||||+| ..+.++.+++.
T Consensus 175 ~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g-~~~~~~~~~~~ 252 (413)
T cd00610 175 ADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG-KMFAFEHFGVE 252 (413)
T ss_pred HHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-chhhHhhcCCC
Confidence 22366777777643 35799999999999999988899999999999999999999999999999998 56667778899
Q ss_pred cceeeeccccccCccccccccCHHHHHhh--cCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Q 011669 317 PDIVTMAKGIGNGIPLGAVVTTPEIAEVL--TRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 317 pDivt~sK~~g~G~pig~v~~~~~~~~~l--~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l 394 (480)
||++|+||++++|+|+||+++++++++.+ ....+.+|+++||++++++.++|+.++++++.+++++++++++++|+++
T Consensus 253 ~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 253 PDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLREL 332 (413)
T ss_pred CCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 4455678999999999999999999988889999999999999999998
Q ss_pred HHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 395 KDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 395 ~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
...++.+..+++.|.++++.+..+..+..++......+.+.|.++||++.+++ ++.+|++|++.+|++++++++++|+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~--~~~lR~~~~~~~t~~~i~~~~~~l~ 410 (413)
T cd00610 333 AEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEIDEGLDALD 410 (413)
T ss_pred HhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 76667777788999999999865432222333456778899999999999875 5789999999999999999999998
Q ss_pred HHH
Q 011669 475 YSL 477 (480)
Q Consensus 475 ~~l 477 (480)
+++
T Consensus 411 ~~l 413 (413)
T cd00610 411 EAL 413 (413)
T ss_pred HhC
Confidence 764
No 85
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-54 Score=404.21 Aligned_cols=421 Identities=26% Similarity=0.381 Sum_probs=345.4
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCHHHHHHHHhhhcCCccccccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCC
Q 011669 37 EHETFLPRMPPFDYSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC 116 (480)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~ 116 (480)
......|+-|.+.+. .+|||+++++.++..++..-...+|+ +..++.-|.|++|+|||++||.++.+.++++|++
T Consensus 19 ~~~n~ep~gP~ikTe--sIPGPks~~l~kel~~v~~t~~v~F~---~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn 93 (484)
T KOG1405|consen 19 VDVNFEPDGPSIKTE--SIPGPKSQELKKELDKVQDTEAVHFF---VDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYN 93 (484)
T ss_pred cccccCCCCCccccc--cCCCchhHHHHHHHhHhhcccceEEe---hhhhhhcCceEEecCCCeeehhhhhhcccccCCC
Confidence 455567888877653 68999999999988888765544443 6678899999999999999999999999999999
Q ss_pred CHHHHHHHHH-HHHh-ccc--cccccCC-hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc---------
Q 011669 117 HPYVVDSIVN-QIKR-IQH--STVLYLN-HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------- 182 (480)
Q Consensus 117 ~p~v~~A~~~-~~~~-~~~--~~~~~~~-~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~--------- 182 (480)
||.+++++.+ ++.+ +.. ....|+. +....+.+.|....|.+.+.|++.-|||.|||.|+|.+..+-
T Consensus 94 ~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~ 173 (484)
T KOG1405|consen 94 NPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAG 173 (484)
T ss_pred CHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCC
Confidence 9999998764 2222 211 1223443 334455555777778889999999999999999999885431
Q ss_pred -----------------CCceEEEEcCCcccccccccccccCC-CccccccCCCeeEecCCCCcCCCCCC-------ChH
Q 011669 183 -----------------GCNDIISLRNAYHGNAAGTMGATAQS-NWKFNVVQTGVHHALNPDPYRGVFGA-------DGE 237 (480)
Q Consensus 183 -----------------~~~~ii~~~~~yhG~~~~~~~~~~~~-~~~~~~~~~g~~~~~~p~~~~~~~~~-------d~~ 237 (480)
+.-.|++|.++|||++.+.++.|... ..+...|...|++.++|. |+.|.+. ..+
T Consensus 174 ~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~-ykYPLdenv~~N~ked~ 252 (484)
T KOG1405|consen 174 FSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPR-YKYPLDENVAENKKEDQ 252 (484)
T ss_pred CCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCcc-ccCChhhhhhhhhhhhh
Confidence 12349999999999999999999754 456778888898888874 5555542 235
Q ss_pred HHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC
Q 011669 238 MYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV 315 (480)
Q Consensus 238 ~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~ 315 (480)
.|++++|++|.... ...++++|+||+|++||....+++|+++|+++|+|||+.+|+||||||-|-|| ++|+++++++
T Consensus 253 ~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG-k~WaHehw~l 331 (484)
T KOG1405|consen 253 GCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG-KFWAHEHWNL 331 (484)
T ss_pred hHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC-ceeeehhcCC
Confidence 58999999998643 24799999999999999999999999999999999999999999999999999 8999999987
Q ss_pred --Ccceeeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 011669 316 --VPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 316 --~pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~ 392 (480)
.||+|||||-+- ||+ .-.++++. -....+++||.|.|.-.....+++++|+++++.+++...|+.|..+|.
T Consensus 332 ~~PpD~vTFSKK~q~gGf-----fh~~~frp-n~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~ 405 (484)
T KOG1405|consen 332 DSPPDVVTFSKKFQTGGF-----FHDEEFRP-NEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLL 405 (484)
T ss_pred CCCccceehhhhhhcCcc-----ccCcccCC-CchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 689999999887 553 23333321 112347899999999999999999999999999999999999999999
Q ss_pred HhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHH
Q 011669 393 ALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 393 ~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+|.+++| .+..+||+|.|+.+++ |.....+.+...++-+|+.++.|| ...|||.|+++..+.+.+-+++
T Consensus 406 ~Lq~~~p~~~~~~RGrGTF~a~d~--------ps~~~Rdk~i~~~~~nGv~~GGCg--~~siRfRPsLvf~~~Ha~i~l~ 475 (484)
T KOG1405|consen 406 ELQAKYPGKINNLRGRGTFIAWDC--------PSGSIRDKLILIARLNGVNLGGCG--DKSIRFRPSLVFRKHHADIFLD 475 (484)
T ss_pred HHHHhCchhhhcccccceEEEEeC--------CChHHHHHHHHHHHHcCceecccc--cceeeeccceeehhhhHHHHHH
Confidence 9999996 5778999999999998 444556788999999999998877 5789999999999999999999
Q ss_pred HHHHHHhhC
Q 011669 472 VMDYSLSKM 480 (480)
Q Consensus 472 ~l~~~l~~~ 480 (480)
+|+++++.+
T Consensus 476 ~~~k~l~~l 484 (484)
T KOG1405|consen 476 IFDKILAGL 484 (484)
T ss_pred HHHHHhccC
Confidence 999998753
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=5e-50 Score=407.06 Aligned_cols=365 Identities=39% Similarity=0.669 Sum_probs=306.1
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
+.|+++++++|.++||.||++||||.+|++.+++||+||.|.+++.+++.+..+....|.++...+|+++|+++++ .+
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~ 85 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSG--AD 85 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC--CC
Confidence 5689999999999999999999999999999999999999999999999987655556778899999999999995 46
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcC-----CceEEEEcCCcccccccccccccCCCccccccC--CCeeEecCCCCcCCCC
Q 011669 160 VVFFTNSGTEANELAIMMARLYTG-----CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVF 232 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~-----~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~--~g~~~~~~p~~~~~~~ 232 (480)
++++++||+||++.|+++++.+++ +++|++++++|||+...+...++...+...... ..+...+ +
T Consensus 86 ~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 157 (379)
T TIGR00707 86 RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAP--------Y 157 (379)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeC--------C
Confidence 899999999999999999887665 689999999999999998877764432211100 1111111 1
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~ 312 (480)
+| .+++++.++ +++++|++||+++++|..+++.+++++|.++|++||+++|+||+|++||++| ..+.++.
T Consensus 158 -~d----~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g-~~~~~~~ 227 (379)
T TIGR00707 158 -ND----IESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG-KFFAYEH 227 (379)
T ss_pred -CC----HHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-hhhhHHh
Confidence 13 567777775 2678999999999999877889999999999999999999999999999988 4555556
Q ss_pred cCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 011669 313 HGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 313 ~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~ 392 (480)
.++.||+++|||++++|+|+||+++++++++.+....+..+|+.|+++++++.++|+.++.+++.+++++++++++++|+
T Consensus 228 ~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~ 307 (379)
T TIGR00707 228 YGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLE 307 (379)
T ss_pred cCCCCCEEEEcccccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999998887666788999999999999999988777788999999999999999
Q ss_pred HhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHH
Q 011669 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDV 472 (480)
Q Consensus 393 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~ 472 (480)
++....+. ..+++.|.++++++..+ ...+.+.|+++||++.+.+ .+++||+|++.+|++++++++++
T Consensus 308 ~~~~~~~~-~~~~~~g~~~~~~~~~~----------~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~t~~~i~~~~~~ 374 (379)
T TIGR00707 308 ELGKNYPN-KEVRGKGLMLGIELEAP----------CKDIVKKALEKGLLVNCAG--PKVLRFLPPLIITKEEIDEAVSA 374 (379)
T ss_pred HHHhhCCC-CccccCceEEEEEecCc----------HHHHHHHHHHCCcEEeeCC--CCEEEEECCCcCCHHHHHHHHHH
Confidence 87554443 44667789999987421 3578888999999999865 47899999999999999999999
Q ss_pred HHHHH
Q 011669 473 MDYSL 477 (480)
Q Consensus 473 l~~~l 477 (480)
|++++
T Consensus 375 l~~~~ 379 (379)
T TIGR00707 375 LEEAI 379 (379)
T ss_pred HHHhC
Confidence 98763
No 87
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=329.65 Aligned_cols=349 Identities=15% Similarity=0.202 Sum_probs=248.8
Q ss_pred CCCeEEEeeeccEEEeCCCCEEEeccCCcccccCC-CCCHHHHHHHHHHHHhcc--c-ccc--ccCChHHHHHHHHHHHh
Q 011669 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCG-HCHPYVVDSIVNQIKRIQ--H-STV--LYLNHAIADFAEALASK 153 (480)
Q Consensus 80 ~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~--~-~~~--~~~~~~~~~l~e~L~~~ 153 (480)
+.++.+++|+|+++||.||++||||.+. ..+| |+||+|++|+.+|+++.+ + ... .+.++...+++++|++.
T Consensus 27 ~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~ 103 (402)
T PRK07505 27 LNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSEL 103 (402)
T ss_pred cccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHH
Confidence 3457899999999999999999999873 5678 999999999999998753 2 111 23467889999999999
Q ss_pred CCCCCCEEEEeCCHHHHHHHHHHHHHh--hc-CCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCC
Q 011669 154 MPGNLKVVFFTNSGTEANELAIMMARL--YT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRG 230 (480)
Q Consensus 154 ~~~~~~~v~f~~sGseA~~~Alk~ar~--~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 230 (480)
++. ++++++||++|++.++++++. ++ ++.++|+++++|||........ ... ..++..++.+
T Consensus 104 ~~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~------~~~--~~~v~~~~~~----- 167 (402)
T PRK07505 104 FGA---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI------CAD--ETEVETIDHN----- 167 (402)
T ss_pred hCC---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh------hhc--CCeEEEeCCC-----
Confidence 864 467888999999999998763 23 4667999999999843211111 000 1133333322
Q ss_pred CCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc--cCccccCCCcc
Q 011669 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ--AGFARTGSHFW 308 (480)
Q Consensus 231 ~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~--tgfgr~G~~~~ 308 (480)
| .++++++++. +..+++++||+|++|+ +.+ +++|+++|++||++||+||+| ++||++| ..+
T Consensus 168 ----d----~~~l~~~~~~---~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g-~~~ 230 (402)
T PRK07505 168 ----D----LDALEDICKT---NKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNG-EGY 230 (402)
T ss_pred ----C----HHHHHHHHhc---CCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECcccccCcCCCC-Cch
Confidence 3 5677777753 3578999999987755 444 899999999999999999998 6789988 555
Q ss_pred cccccCC-Cccee----eeccccccCccccccc-cCHHHHHhhcCCCccccCCCc--HHHHHHHHHHHHHhhhhHHHHHH
Q 011669 309 GFEAHGV-VPDIV----TMAKGIGNGIPLGAVV-TTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKVIQKDKLQNNA 380 (480)
Q Consensus 309 ~~~~~~~-~pDiv----t~sK~~g~G~pig~v~-~~~~~~~~l~~~~~~~t~~~~--~~~~aaa~a~L~~i~~~~~~~~~ 380 (480)
..+..+. .||.+ |+||+++++ .|+++ .++++++.+....+..||+++ +++++++.++++.+.++.+.+.
T Consensus 231 ~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~- 307 (402)
T PRK07505 231 VRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQL- 307 (402)
T ss_pred HHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH-
Confidence 5666776 67744 799999853 26665 478888888765666777655 5899999999987655544332
Q ss_pred HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEE
Q 011669 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRI 455 (480)
Q Consensus 381 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi 455 (480)
.+++++.+..+... ....+++.++++...... .......+.+.|+++||++.+... ..++|||
T Consensus 308 ---~~~l~~~~~~~~~~--~~~~~~g~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi 375 (402)
T PRK07505 308 ---QQKLQNNIALFDSL--IPTEQSGSFLPIRLIYIG-------DEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRI 375 (402)
T ss_pred ---HHHHHHHHHHHHHH--HHhcCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEE
Confidence 23333333322111 112235555554322211 112356788999999999987521 1268999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 456 TPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 456 ~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|++.+|++|+++++++|++++++
T Consensus 376 ~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 376 MFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred ecCccCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998864
No 88
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=1.1e-35 Score=308.40 Aligned_cols=354 Identities=13% Similarity=0.080 Sum_probs=260.4
Q ss_pred eEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHHhCCCC
Q 011669 83 LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALASKMPGN 157 (480)
Q Consensus 83 ~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~~~~~~ 157 (480)
.++.+++|.+++ .||++||||.++.+.... +||+|.+|+.+++++.++.+ ..++++...+|+++|+++++.
T Consensus 94 ~~~~~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~- 169 (481)
T PLN02822 94 PVLESAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT- 169 (481)
T ss_pred CceecCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-
Confidence 478889999999 899999999988665433 48999999999999864421 134578899999999999985
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChH
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE 237 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~ 237 (480)
.+.|+|++|++ ++..+++. ++++.++|++++.||+.....+.+.+.. +..++. +|.
T Consensus 170 ~~~i~~s~G~~-a~~sai~a---~~~~gd~Ii~d~~~H~s~~~~~~ls~~~----------~~~~~~---------nd~- 225 (481)
T PLN02822 170 PDSILYSYGLS-TIFSVIPA---FCKKGDIIVADEGVHWGIQNGLYLSRST----------IVYFKH---------NDM- 225 (481)
T ss_pred CCEEEECCHHH-HHHHHHHH---hCCCCCEEEEeCCccHHHHHHHHHcCCe----------EEEECC---------CCH-
Confidence 36787776655 78887773 4567778889999998876666655421 112211 232
Q ss_pred HHHHHHHHHHHccC-----CCce-EEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc--CccccCCCccc
Q 011669 238 MYAKDVQDLIDFGT-----SGHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA--GFARTGSHFWG 309 (480)
Q Consensus 238 ~~~~~le~~i~~~~-----~~~~-a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t--gfgr~G~~~~~ 309 (480)
++++..+++.. .+++ ++|++|++++++|.+.+ +++|+++|++||+++|+||+|+ .+|++| .. .
T Consensus 226 ---~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G-~G-~ 296 (481)
T PLN02822 226 ---ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSG-RG-L 296 (481)
T ss_pred ---HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CC-h
Confidence 33333333210 1234 89999999999999987 9999999999999999999998 346666 33 3
Q ss_pred ccccCC---Ccceee--eccccc-cCccccccccCHHHHHhhcCCCccccCCCc--HHHHHHHHHHHHHhhh-hHHHHHH
Q 011669 310 FEAHGV---VPDIVT--MAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKVIQK-DKLQNNA 380 (480)
Q Consensus 310 ~~~~~~---~pDivt--~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~--~~~~aaa~a~L~~i~~-~~~~~~~ 380 (480)
.+++++ .+|+++ |||++| .| ||+++++++++.+....+..+|+++ |..+++++++|+.+++ ++..+++
T Consensus 297 ~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l 373 (481)
T PLN02822 297 SEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKL 373 (481)
T ss_pred HHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 567776 688876 889998 24 7899999999988876777888876 8889999999998766 5788899
Q ss_pred HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCc--C-----CCE
Q 011669 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGF--Y-----GNV 452 (480)
Q Consensus 381 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~--~-----~~~ 452 (480)
+++++++++.|+++. ++.....+.+.++++.+.........+......+++.|+ ++||++.++.. + ...
T Consensus 374 ~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~ 450 (481)
T PLN02822 374 KENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVG 450 (481)
T ss_pred HHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCc
Confidence 999999999998752 211122345666677763211111111223567888887 88999987521 1 246
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 453 FRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 453 iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+||+.+..+|++||++++++|++++.+
T Consensus 451 lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 451 IRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 999988999999999999999998765
No 89
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.9e-34 Score=290.95 Aligned_cols=331 Identities=18% Similarity=0.170 Sum_probs=245.5
Q ss_pred CCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccc---c--ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHST---V--LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~---~--~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA 170 (480)
+|+++|+|+++.+ ||. +||+|++|+.++++++++.. . .+.++...+|+++|++.++. +.++|++||++|
T Consensus 43 ~~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~A 117 (406)
T PRK13393 43 GPREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVS 117 (406)
T ss_pred CCccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHH
Confidence 4689999987744 466 69999999999999876432 1 23356789999999999964 678899999999
Q ss_pred HHHHHH-HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 171 NELAIM-MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 171 ~~~Alk-~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+.|++ +++.+ ++++|+++..||+.....+...+.. +..++. +| .++++++++.
T Consensus 118 n~~ai~~l~~~~--~g~~I~~~~~~H~s~~~~~~~~g~~----------~~~~~~---------~d----~~~l~~~l~~ 172 (406)
T PRK13393 118 NWAALSTLGSRL--PGCVILSDELNHASMIEGIRHSRAE----------KRIFRH---------ND----PADLERKLSD 172 (406)
T ss_pred HHHHHHHhhcCC--CCCEEEEccchhHHHHHHHHHcCCe----------EEEeCC---------CC----HHHHHHHHHh
Confidence 999999 45433 3468888999999888776554321 111111 23 4567777754
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-Cc-cccCCCcccccccCCC--ccee--eec
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFEAHGVV--PDIV--TMA 323 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-gf-gr~G~~~~~~~~~~~~--pDiv--t~s 323 (480)
..++++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |++| ..+ .++.++. +|++ |||
T Consensus 173 ~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~-~~~~~~~~~~~i~~~tls 246 (406)
T PRK13393 173 LDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGI-AEREGLADRLTIIEGTLA 246 (406)
T ss_pred ccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCC-Cch-hhhcCCCCCCeEEEEeCc
Confidence 32346789999999999999987 9999999999999999999997 66 7777 333 2455554 5776 999
Q ss_pred ccccc-CccccccccCHHHHHhhcCCCc--cccCCCcHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 324 KGIGN-GIPLGAVVTTPEIAEVLTRRNY--FNTFGGNPVCTAAGHAVLKVIQKDK-LQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 324 K~~g~-G~pig~v~~~~~~~~~l~~~~~--~~t~~~~~~~~aaa~a~L~~i~~~~-~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
|++|. | ||+++++++++.+..... ..+.+.+|.+++++.++|+.+++.. ..++.+++++++++.|+++ .++
T Consensus 247 Ka~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 321 (406)
T PRK13393 247 KAFGVMG---GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA--GIP 321 (406)
T ss_pred hhhcccC---ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc--CCC
Confidence 99983 4 778899998888765432 2466788999999999999876543 2355567788888888764 222
Q ss_pred ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 400 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
.+++.|.++.+.+.. ......+.+.|++ +||++.+... ..+.+||+|++.+|++|+|+++++|
T Consensus 322 ---~~~~~~~i~~v~~~~--------~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l 390 (406)
T PRK13393 322 ---HLPNPSHIVPVMVGD--------PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQAL 390 (406)
T ss_pred ---cCCCCCCeEEEEeCC--------HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence 246678887775421 1235678888887 5999976421 2368999999999999999999999
Q ss_pred HHHHhh
Q 011669 474 DYSLSK 479 (480)
Q Consensus 474 ~~~l~~ 479 (480)
++++++
T Consensus 391 ~~~~~~ 396 (406)
T PRK13393 391 SEIWAR 396 (406)
T ss_pred HHHHHh
Confidence 998764
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=2.6e-32 Score=279.17 Aligned_cols=334 Identities=18% Similarity=0.195 Sum_probs=242.3
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA 170 (480)
.+|+++++|+++.+. .|+ +||+|++|+.+++++.++... .+.++...+|+++|+++++. +.+++++||++|
T Consensus 42 ~~~~~~~~~~sn~yl-gl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~--~~~l~~~sG~~a 117 (402)
T TIGR01821 42 DGAKDVTVWCSNDYL-GMG-QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK--ESALVFTSGYVA 117 (402)
T ss_pred CCCeeEEEeEccCcC-CCC-CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC--CeEEEECchHHH
Confidence 356999999877553 243 589999999999998754321 23467889999999999963 567899999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
|+.+++++... .++.+++.+..||+.....+...+.+. ...+. +| .++++++++..
T Consensus 118 n~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~~~----------~~~~~---------~d----~~~l~~~l~~~ 173 (402)
T TIGR01821 118 NDATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGAEK----------FIFRH---------ND----VAHLEKLLQSV 173 (402)
T ss_pred HHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCCeE----------EEECC---------CC----HHHHHHHHHhc
Confidence 99999987643 235677778889988766655443211 11111 23 46777777643
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-C-ccccCCCcccccccCC--Cccee--eecc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGFEAHGV--VPDIV--TMAK 324 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-g-fgr~G~~~~~~~~~~~--~pDiv--t~sK 324 (480)
.++++++|++|++++++|.+.+ +++|+++|++||+++|+||+|+ | +|..| ... .+..++ .+|++ ||||
T Consensus 174 ~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g-~g~-~~~~~~~~~~div~~t~sK 247 (402)
T TIGR01821 174 DPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRG-GGI-AERDGLMHRIDIIEGTLAK 247 (402)
T ss_pred cCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCC-Ccc-chhccCCCCCeEEEEechh
Confidence 3346789999999999999877 9999999999999999999998 4 24444 211 234454 46777 8999
Q ss_pred cccc-CccccccccCHHHHHhhcCCC--ccccCCCcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhHHhcCc
Q 011669 325 GIGN-GIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGI 400 (480)
Q Consensus 325 ~~g~-G~pig~v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~ 400 (480)
++|. | ||+++++++++.+.... +..+.+.+|.++++++++|+.+++. .+.++..++++++++.|+++ .++.
T Consensus 248 a~g~~G---G~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 322 (402)
T TIGR01821 248 AFGVVG---GYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL--GIPV 322 (402)
T ss_pred hhccCC---ceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc--CCCc
Confidence 9983 4 77889999988876422 2346678999999999999988754 34556677888888888765 2322
Q ss_pred eeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 401 IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 401 ~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+.+.+.++.+.+. .......+.+.|++ +||++.+... ..+++||+|++.+|++||++++++|+
T Consensus 323 ---~~~~~~i~~i~~~--------~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 323 ---IPNPSHIVPVIIG--------DAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred ---CCCCCCEEEEEeC--------CHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 2345667666541 11235668888865 5999976421 23689999999999999999999999
Q ss_pred HHHhh
Q 011669 475 YSLSK 479 (480)
Q Consensus 475 ~~l~~ 479 (480)
+++++
T Consensus 392 ~~~~~ 396 (402)
T TIGR01821 392 LVWDR 396 (402)
T ss_pred HHHHH
Confidence 98875
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=2.6e-32 Score=279.67 Aligned_cols=331 Identities=19% Similarity=0.220 Sum_probs=241.1
Q ss_pred CCEEEeccCCcccccCCCC-CHHHHHHHHHHHHhccccc----cc-cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQHST----VL-YLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~----~~-~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~ 171 (480)
|++++||+++.. ||++ ||+|++|+.+++++.++.. .. +.++...+|+++|+++++. +..++++||++||
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~--~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK--EAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC--CcEEEECcHHHHH
Confidence 699999987643 5676 8999999999998875432 12 3577889999999999863 5567889999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
+.++++++... ++.+++.+..+|+.....+...+.+ +...+. +| .++++++++...
T Consensus 120 ~~ai~~l~~~~-~~~~i~~~~~~h~s~~~~~~~~~~~----------~~~~~~---------~d----~~~le~~l~~~~ 175 (407)
T PRK09064 120 DATLSTLAKLI-PDCVIFSDELNHASMIEGIRRSRCE----------KHIFRH---------ND----VAHLEELLAAAD 175 (407)
T ss_pred HHHHHHHhCCC-CCCEEEEeCcchHHHHHHHHHcCCc----------EEEECC---------CC----HHHHHHHHHhcc
Confidence 99999876432 3466666666677655444333211 111111 23 467888776432
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-C-ccccCCCcccccccCC--Cccee--eeccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGFEAHGV--VPDIV--TMAKG 325 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-g-fgr~G~~~~~~~~~~~--~pDiv--t~sK~ 325 (480)
++++++|++|++++++|.+.+ +++|+++|++||+++|+||+|+ | ||++| ..+ .++.++ .+|++ ||||+
T Consensus 176 ~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~g~-~~~~~~~~~~div~~t~sKa 249 (407)
T PRK09064 176 PDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRG-GGI-AERDGLMDRIDIIEGTLAKA 249 (407)
T ss_pred CCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCC-CCh-HHhcCCCCCCeEEEEecchh
Confidence 346889999999999998887 9999999999999999999997 5 57777 333 344454 46887 99999
Q ss_pred ccc-CccccccccCHHHHHhhcCCC--ccccCCCcHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 326 IGN-GIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDK-LQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 326 ~g~-G~pig~v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~~~-~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
+|. | ||+++++++++.+.... +..+.+.+|.++++++++|+.+++.+ ..++++++++++++.|+++ .++.
T Consensus 250 ~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 323 (407)
T PRK09064 250 FGVMG---GYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA--GIPV- 323 (407)
T ss_pred hhccC---ceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCCC-
Confidence 983 4 78899999888775432 23466788999999999999887643 4577888888998888775 2322
Q ss_pred eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
+.+.+.++.+.+. .......+.+.|++ +||++.+... ..+++||+|++.+|++|+++++++|++
T Consensus 324 --~~~~~~iv~i~~~--------~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 324 --MPNESHIVPVMVG--------DPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred --CCCCCCEEEEEeC--------CHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2234566666542 11235678888864 6999976421 136899999999999999999999999
Q ss_pred HHhh
Q 011669 476 SLSK 479 (480)
Q Consensus 476 ~l~~ 479 (480)
++++
T Consensus 394 ~~~~ 397 (407)
T PRK09064 394 VWAR 397 (407)
T ss_pred HHHH
Confidence 8765
No 92
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1e-31 Score=273.17 Aligned_cols=347 Identities=19% Similarity=0.225 Sum_probs=246.2
Q ss_pred cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHH
Q 011669 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALAS 152 (480)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~ 152 (480)
|+.-..+++++|.|+|+ +|++||||.++. ++|| ++|+|++++.+++.+..+.. ..+..+...++++++++
T Consensus 20 ~~~~~~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~ 95 (385)
T PRK05958 20 YRSLRPREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAE 95 (385)
T ss_pred CccccccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHH
Confidence 33435789999999997 999999999874 4787 78999999999998753211 12346778899999999
Q ss_pred hCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 153 ~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
+++. ++++++++|++++..+++... .+++.|++.+ .+|+.........+ .....++.
T Consensus 96 ~~~~--~~~i~~~~g~~~~~~~l~~~~--~~gd~V~~~~-~~~~~~~~~~~~~g------------~~~~~~~~------ 152 (385)
T PRK05958 96 WFGA--ERALLFSSGYAANLAVLTALA--GKGDLIVSDK-LNHASLIDGARLSR------------ARVRRYPH------ 152 (385)
T ss_pred HhCC--CcEEEECcHHHHHHHHHHHhC--CCCCEEEEeC-ccCHHHHHHHHhcC------------CceEEeCC------
Confidence 9863 456788899999998876542 2455666554 55665554444332 21222221
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGF 310 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~ 310 (480)
.| .++++++++.. ++++++++++++++++|...+ +++|.++|++||+++|+||+|+. ++++|..+...
T Consensus 153 -~d----~~~l~~~i~~~-~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~ 222 (385)
T PRK05958 153 -ND----VDALEALLAKW-RAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE 222 (385)
T ss_pred -CC----HHHHHHHHHhc-cCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence 12 46788877642 225788999999998887765 99999999999999999999952 34444211111
Q ss_pred cccCCCcc---eeeeccccccCccccccccCHHHHHhhcCC--CccccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHH
Q 011669 311 EAHGVVPD---IVTMAKGIGNGIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVG 384 (480)
Q Consensus 311 ~~~~~~pD---ivt~sK~~g~G~pig~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~ 384 (480)
......+| +.++||+++. +.||+++++++++.+... .+..+.+.+++.++++.++|+.+++ +++.+++.+++
T Consensus 223 ~~~~~~~~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~ 300 (385)
T PRK05958 223 AGLAGEPDVILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALI 300 (385)
T ss_pred hCCCCCCceEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 11223455 5589999974 228899999988776432 2334556788888889899988765 36778888888
Q ss_pred HHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCC
Q 011669 385 SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPL 459 (480)
Q Consensus 385 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~ 459 (480)
+++.+.|+++ .+. .+.+.|.++++.+. ......++.+.|+++||.+.++.. ..+++||+|+.
T Consensus 301 ~~l~~~L~~~--~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~ 367 (385)
T PRK05958 301 ARLRAGLRAL--GFQ---LMDSQSAIQPLIVG--------DNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTA 367 (385)
T ss_pred HHHHHHHHHc--CCC---cCCCCCCEEEEEeC--------CHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecC
Confidence 8888888875 122 23456778887762 123456788999999999986421 13689999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 011669 460 CFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 460 ~~t~~~id~~l~~l~~~l 477 (480)
.++++++++++++|++++
T Consensus 368 ~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 368 AHTEADIDRLLEALAEAL 385 (385)
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 999999999999998763
No 93
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-31 Score=271.21 Aligned_cols=337 Identities=18% Similarity=0.194 Sum_probs=239.9
Q ss_pred ccCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccC--ChHHHHHHHHHHH
Q 011669 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYL--NHAIADFAEALAS 152 (480)
Q Consensus 78 ~~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~--~~~~~~l~e~L~~ 152 (480)
+.+.|++..++.|.+++|.+||+||||. +||+|++++.+++++.+ +.+..+. .+...+|+++|++
T Consensus 41 ~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~ 110 (407)
T PRK07179 41 WNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAA 110 (407)
T ss_pred cCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHH
Confidence 3467899999999999999999999986 68999999999998752 2233333 3577899999999
Q ss_pred hCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 153 ~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
.++. +.++|++||++||+.+++.+.. +++.|++. ...|.......... ++...+++.
T Consensus 111 ~~g~--~~~~~~~sG~~An~~~l~~l~~--~g~~v~~~-~~~h~s~~~~~~~~------------g~~~~~~~~------ 167 (407)
T PRK07179 111 FTGF--ESCLLCQSGWAANVGLLQTIAD--PNTPVYID-FFAHMSLWEGVRAA------------GAQAHPFRH------ 167 (407)
T ss_pred HhCC--CcEEEECCHHHHHHHHHHHhCC--CCCEEEEE-CCcCHHHHHHHHHC------------CCeEEEecC------
Confidence 9864 5678999999999999997653 34555554 33343222221111 222222211
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGF 310 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~ 310 (480)
+| .++++++++. .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. +|++| ..+ +
T Consensus 168 -~d----~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g-~g~-~ 233 (407)
T PRK07179 168 -ND----VDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQG-AGL-V 233 (407)
T ss_pred -CC----HHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCC-Cch-H
Confidence 23 5778888863 24689999999999999987 99999999999999999999973 23444 211 3
Q ss_pred cccCCC--ccee--eeccccccCccccccccCHHHHHhhcCCC----ccccCCCcHHHHHHHHHHHHHhhhh-HHHHHHH
Q 011669 311 EAHGVV--PDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRN----YFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAH 381 (480)
Q Consensus 311 ~~~~~~--pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~----~~~t~~~~~~~~aaa~a~L~~i~~~-~~~~~~~ 381 (480)
..+++. +|++ |++|++++ |+|++++++++++.+.... +.+|+ ++..++++.++++.+.+. ...++++
T Consensus 234 ~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~ 309 (407)
T PRK07179 234 AELGLTSRVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLH 309 (407)
T ss_pred HhcCCCCCCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 344543 4775 57899974 6899999999887765322 22333 345555666778877554 4778889
Q ss_pred HHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceee----ccCc-CCCEEEEe
Q 011669 382 VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVG----KGGF-YGNVFRIT 456 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~-~~~~iRi~ 456 (480)
++.+++++.|+++ .+ .+++.+.++++.+.. ......+.+.|.++||++. +... ..+.+||+
T Consensus 310 ~~~~~l~~~L~~~--g~----~v~~~~~i~~l~~~~--------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis 375 (407)
T PRK07179 310 ANARFLREGLSEL--GY----NIRSESQIIALETGS--------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLS 375 (407)
T ss_pred HHHHHHHHHHHHc--CC----CCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEE
Confidence 9999999988875 22 233567788887521 1235667888999999743 2211 24789999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhh
Q 011669 457 PPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 457 p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++..+|++||++++++|++++++
T Consensus 376 ~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 376 LNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred ECCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 94
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=5.8e-31 Score=267.80 Aligned_cols=348 Identities=16% Similarity=0.172 Sum_probs=240.7
Q ss_pred cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHH
Q 011669 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALAS 152 (480)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~ 152 (480)
|..|..+.+++|.||| .||++||||.++ ..+|| ++|.+.+++.+++.+..+.. ..+..+...++++++++
T Consensus 14 ~~~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~ 89 (385)
T TIGR01825 14 YISIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAK 89 (385)
T ss_pred cccccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHH
Confidence 3457899999999999 999999999875 33688 89999999999988653321 12346778899999999
Q ss_pred hCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 153 ~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
.++. +..++.+||++|+..+++.+. .+++.|++.+ .+|+.....+...+. ....++.
T Consensus 90 ~~g~--~~~i~~~sG~~a~~~a~~~~~--~~gd~vi~~~-~~~~~~~~~~~~~g~------------~~~~~~~------ 146 (385)
T TIGR01825 90 FKKT--EAALVFQSGFNTNQGVLSALL--RKGDIVLSDE-LNHASIIDGLRLTKA------------TKKIYKH------ 146 (385)
T ss_pred HhCC--CcEEEECcHHHHHHHHHHHhC--CCCCEEEEEc-cccHHHHHHHHhcCC------------ceEEeCC------
Confidence 8864 345677888999999888654 3556666555 455544433333221 1111110
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGF 310 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~ 310 (480)
.| .+++++.++.....++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+. ++++| . ...
T Consensus 147 -~d----~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~-~-~~~ 215 (385)
T TIGR01825 147 -AD----MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAG-R-GTV 215 (385)
T ss_pred -CC----HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-C-ccH
Confidence 12 456777665432346889999999999998776 99999999999999999999964 34444 1 112
Q ss_pred cccCCCcc----eeeeccccccCccccccccCHHHHHhhcCCCc--cccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHH
Q 011669 311 EAHGVVPD----IVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNY--FNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVV 383 (480)
Q Consensus 311 ~~~~~~pD----ivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~--~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~ 383 (480)
..+++.+| +.+|||+++. +.||+++++++++.+..... ..+...++..++++.++|+.+.+ .+..+++.++
T Consensus 216 ~~~~~~~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 293 (385)
T TIGR01825 216 HHFGLEDKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDN 293 (385)
T ss_pred hhcCCCcCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 22333333 4689999963 34889999998888754322 12223567888888898887643 4577888888
Q ss_pred HHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCC
Q 011669 384 GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPP 458 (480)
Q Consensus 384 ~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~ 458 (480)
++++.+.|.++ .++. ....+.++++.+. .......+.+.|+++||++...+. ..+++|++|+
T Consensus 294 ~~~l~~~L~~~--g~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~ 360 (385)
T TIGR01825 294 TRFFKAGLGKL--GYDT---GGSETPITPVVIG--------DEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPT 360 (385)
T ss_pred HHHHHHHHHHc--CCCC---CCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEc
Confidence 88888888775 2222 1233445555431 112346688889999999853211 2368999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhh
Q 011669 459 LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 459 ~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.++++++++++++|++++++
T Consensus 361 ~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 361 AEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865
No 95
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=5.3e-30 Score=261.72 Aligned_cols=348 Identities=19% Similarity=0.194 Sum_probs=240.7
Q ss_pred CeEEEeeeccEEEeCCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCC
Q 011669 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMP 155 (480)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~ 155 (480)
+..+++++|.++||.+|+.||||.+|. .+|| ++|++.+++.+++.+..+... .+..+...++++.+++.++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~~---~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCANN---YLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeeccC---ccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 457789999999999999999998763 3577 689999999999877533211 2345677889999999986
Q ss_pred CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCC
Q 011669 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235 (480)
Q Consensus 156 ~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d 235 (480)
.+ +. +++++|++++..+++... .+++.|++.++.|.+........ + ...+.++. .|
T Consensus 102 ~~-~~-i~~tsG~~a~~~~~~~l~--~~gd~vi~~~~~~~~~~~~~~~~-~------------~~~~~~~~-------~d 157 (397)
T PRK06939 102 TE-DA-ILYSSCFDANGGLFETLL--GKEDAIISDALNHASIIDGVRLC-K------------AKRYRYAN-------ND 157 (397)
T ss_pred CC-cE-EEEcChHHHHHHHHHHhC--CCCCEEEEEhhhhHHHHHHHHhc-C------------CceEEeCC-------CC
Confidence 43 44 566667999999987653 36788999888887654433222 1 11111111 13
Q ss_pred hHHHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-Cc-cccCCCccccc
Q 011669 236 GEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFE 311 (480)
Q Consensus 236 ~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-gf-gr~G~~~~~~~ 311 (480)
.+++++.++... ..++++|+++++++++|...+ +++|.++|++||+++|+||+|. |+ ++.| .. ...
T Consensus 158 ----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~-~~-~~~ 227 (397)
T PRK06939 158 ----MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENG-RG-TVE 227 (397)
T ss_pred ----HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCC-CC-HHH
Confidence 456666665321 226788999999998887554 9999999999999999999995 33 3333 11 122
Q ss_pred ccCC--Cccee--eeccccccCccccccccCHHHHHhhcCCCccccC--CCcHHHHHHHHHHHHHhhh-hHHHHHHHHHH
Q 011669 312 AHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTF--GGNPVCTAAGHAVLKVIQK-DKLQNNAHVVG 384 (480)
Q Consensus 312 ~~~~--~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~ 384 (480)
..++ .+|++ ++||++++ +|+||+++++++++.+........+ ..++..++++.++++.+.+ +++.++++++.
T Consensus 228 ~~~~~~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 306 (397)
T PRK06939 228 HFGVMDRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENA 306 (397)
T ss_pred HcCCCCCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2333 35666 89999964 5999999999998887653222222 2346667778888887654 35667777888
Q ss_pred HHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCC
Q 011669 385 SYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPL 459 (480)
Q Consensus 385 ~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~ 459 (480)
+++++.|+++ .+. ...+.+.++.+.+. ......++.+.|+++||.+.+... ..+++|+++++
T Consensus 307 ~~l~~~L~~~--~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~ 373 (397)
T PRK06939 307 RYFREGMTAA--GFT---LGPGEHPIIPVMLG--------DAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSA 373 (397)
T ss_pred HHHHHHHHHc--CCC---cCCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECC
Confidence 8888877665 121 12344555544431 122356788999999999875321 13589999998
Q ss_pred CCCHHHHHHHHHHHHHHHhhC
Q 011669 460 CFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 460 ~~t~~~id~~l~~l~~~l~~~ 480 (480)
.++++++++++++|+++++++
T Consensus 374 ~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 374 AHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999988753
No 96
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=2.9e-29 Score=256.04 Aligned_cols=351 Identities=17% Similarity=0.183 Sum_probs=242.5
Q ss_pred cCCCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCC-CHHHHHHHHHHHHhccc--cccc---cCChHHHHHHHHHHH
Q 011669 79 YSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQH--STVL---YLNHAIADFAEALAS 152 (480)
Q Consensus 79 ~~~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~--~~~~---~~~~~~~~l~e~L~~ 152 (480)
++.|..+.++.|.++++.+|++||||.+|. .+|++ +|+|++++.+++.+... .... +..+...+++++|++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~---~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~ 94 (393)
T TIGR01822 18 FKSERIITSPQGADIRVADGREVLNFCANN---YLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAA 94 (393)
T ss_pred CCcccccccCCCceEEecCCceEEEeeCCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHH
Confidence 345677888999999999999999999884 35666 89999999999987422 2222 225567899999999
Q ss_pred hCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 153 KMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 153 ~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
+++. +.+++++||++|+..++.... .+++.|++.++.|++...+. ...+.. ++ .++
T Consensus 95 ~~g~--~~~ii~~~~~~a~~~~~~~l~--~~gd~vi~~~~~~~s~~~~~-~~~~~~---------~~---~~~------- 150 (393)
T TIGR01822 95 FLGT--EDTILYASCFDANGGLFETLL--GAEDAIISDALNHASIIDGV-RLCKAK---------RY---RYA------- 150 (393)
T ss_pred HhCC--CcEEEECchHHHHHHHHHHhC--CCCCEEEEeccccHHHHHHH-HhcCCc---------eE---EeC-------
Confidence 9965 456777999999998776542 36678888877776544332 221111 11 111
Q ss_pred CCChHHHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCc-cc
Q 011669 233 GADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF-WG 309 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~-~~ 309 (480)
..| .+++++.++... ..++++|+++++++++|.+.+ +++|.++|++||+++|+||+|. +|..|... ..
T Consensus 151 ~~d----~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~-~g~~~~~~~~~ 221 (393)
T TIGR01822 151 NND----MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA-TGFLGPTGRGS 221 (393)
T ss_pred CCC----HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc-ccCcCCCCCch
Confidence 023 466777776421 126789999999999998876 9999999999999999999994 44332110 11
Q ss_pred ccccCC--Cccee--eeccccccCccccccccCHHHHHhhcCCCccccCC--CcHHHHHHHHHHHHHhhh-hHHHHHHHH
Q 011669 310 FEAHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQK-DKLQNNAHV 382 (480)
Q Consensus 310 ~~~~~~--~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aaa~a~L~~i~~-~~~~~~~~~ 382 (480)
.+..++ .+|++ ++||+++ |+|+||+++++++++.+........++ .++..+++++++|+.++. ++..+++++
T Consensus 222 ~~~~~~~~~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 300 (393)
T TIGR01822 222 HELCGVMGRVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWA 300 (393)
T ss_pred HHhcCCCCCCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 122333 35666 7899986 479999999999988776532222232 356667778888887644 456788888
Q ss_pred HHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeC
Q 011669 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITP 457 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p 457 (480)
+.+++++.|+++ .+.. ..+.+.++.+.+. .......+.+.|.++||++..... ....+||++
T Consensus 301 ~~~~l~~~L~~~--g~~~---~~~~~~~~~i~~~--------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~ 367 (393)
T TIGR01822 301 NTRYFRERMEAA--GFDI---KPADHPIIPVMLY--------DAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQI 367 (393)
T ss_pred HHHHHHHHHHHc--CCCC---CCCCCCEEEEEeC--------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEE
Confidence 888888888764 2221 1223445555442 122356788889999999863211 124699999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 011669 458 PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++.+|++||++++++|++++++
T Consensus 368 ~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 368 SAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 97
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=6.9e-30 Score=257.94 Aligned_cols=344 Identities=17% Similarity=0.165 Sum_probs=237.1
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-c-cccccCChHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-H-STVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEANEL 173 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~-~~~~~~~~~~~~l~e~L~~~~~--~~~~-~v~f~~sGseA~~~ 173 (480)
..+||+..|.+.. ..++.+.+++.+++.... + +...+..+.+..+++++.+..+ .+.+ +|++|+|++||+..
T Consensus 28 ~~vi~l~iG~Pd~---~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEPDF---PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCCCC---CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 4789998888866 567889999999988763 2 2222333444444444444543 2233 49999999999999
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcC-CCCCCChHHHHHHHHHHHHccCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFGTS 252 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~~~ 252 (480)
++..... ++++||+++|+|..+........+ ..+.++.... ..|..| .+++++.++ +
T Consensus 105 ~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg-------------~~v~v~l~~~~~~f~~d----~~~l~~~i~---~ 162 (393)
T COG0436 105 AFLALLN--PGDEVLIPDPGYPSYEAAVKLAGG-------------KPVPVPLDEEENGFKPD----LEDLEAAIT---P 162 (393)
T ss_pred HHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCC-------------EEEEEeCCcCccCCcCC----HHHHHhhcC---c
Confidence 9987665 788899999999776665555543 2222221111 244444 677888775 2
Q ss_pred CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccC---CCcceeeeccccc-
Q 011669 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHG---VVPDIVTMAKGIG- 327 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~---~~pDivt~sK~~g- 327 (480)
++++++++..+|++|.+ ++++++++|.++|++||+++|+||+|.+|.++|..+.. .+..+ ...-+.+|||.++
T Consensus 163 -ktk~i~ln~P~NPTGav-~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 163 -KTKAIILNSPNNPTGAV-YSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred -cceEEEEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc
Confidence 78888888888888876 59999999999999999999999999999888731211 22222 2334558999999
Q ss_pred cCccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe-
Q 011669 328 NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR- 405 (480)
Q Consensus 328 ~G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~- 405 (480)
.|||+||++++ +++++.+.......+++.+.++|.++.++|+.-++..+.+..++.-+..++.+.+...+.+.+....
T Consensus 241 tGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~ 320 (393)
T COG0436 241 TGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKP 320 (393)
T ss_pred cccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccC
Confidence 79999999999 8888887755566788999999999999998532222333333333333333333333344344444
Q ss_pred ccceeE-EEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcCC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 406 GRGFLL-GVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFYG-----NVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 406 g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~-----~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
..|.|+ ++.+... .....++..|+ +.||++.||..|+ +++||+ ++.+++++++++++|.+.++
T Consensus 321 p~Ga~Y~~~~i~~~--------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 321 PEGAFYLFPKIPEL--------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLA 390 (393)
T ss_pred CCeeEEEEeecCCC--------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHH
Confidence 545554 5554321 12455666665 5689999986554 479999 78888999999999999876
Q ss_pred h
Q 011669 479 K 479 (480)
Q Consensus 479 ~ 479 (480)
.
T Consensus 391 ~ 391 (393)
T COG0436 391 E 391 (393)
T ss_pred h
Confidence 4
No 98
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.97 E-value=4.1e-29 Score=253.59 Aligned_cols=328 Identities=15% Similarity=0.146 Sum_probs=230.0
Q ss_pred CCHHHHHHHHHHHHhcccc---cc-cc-CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEE
Q 011669 116 CHPYVVDSIVNQIKRIQHS---TV-LY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL 190 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~---~~-~~-~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~ 190 (480)
.||++++++.+++++.+.. +. .| ......+|+++++++++. +..++++||+.|+..++... ..+++.|++.
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~--e~al~~~sG~~a~~~~i~~l--~~~GD~Vl~~ 88 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT--ESAILYSDGASTTSSTVAAF--AKRGDLLVVD 88 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEecCcHHHHHHHHHHh--CCCCCEEEEe
Confidence 5899999999999874321 11 12 256778999999999965 35678899988998888764 3366778877
Q ss_pred cCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc----------CCCceEEEEE
Q 011669 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG----------TSGHVAGFLS 260 (480)
Q Consensus 191 ~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~----------~~~~~a~vi~ 260 (480)
++.|.+. ...+.+... .+..+.. +| .+++++.++.. ...++..|++
T Consensus 89 ~~~h~s~-~~~~~l~~~----------~~~~~~~---------~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~ 144 (392)
T PLN03227 89 RGVNEAL-LVGVSLSRA----------NVRWFRH---------ND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVV 144 (392)
T ss_pred ccccHHH-HHHHHHcCC----------eEEEeCC---------CC----HHHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence 7776543 222222211 1111111 12 22333322211 1135789999
Q ss_pred cccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc--CccccCCCcccccccCCCc----ceeeeccccccCccccc
Q 011669 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA--GFARTGSHFWGFEAHGVVP----DIVTMAKGIGNGIPLGA 334 (480)
Q Consensus 261 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t--gfgr~G~~~~~~~~~~~~p----Divt~sK~~g~G~pig~ 334 (480)
||+++++|.+.+ +++|+++|++||+++|+||+|+ .+|++| . +..+++|+.| |++++|++-+.|.+.|+
T Consensus 145 E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G-~-g~~~~~g~~p~~~~Div~~slsk~~g~~gg~ 218 (392)
T PLN03227 145 EGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSG-R-GSLEHAGLKPMVHAEIVTFSLENAFGSVGGM 218 (392)
T ss_pred cCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCC-C-cHHHHcCCCCCCCceEEEeechhhhhccCcE
Confidence 999999999987 9999999999999999999997 334555 2 4678889988 99987744444556678
Q ss_pred cccCHHHHHhhcCCCccccCCCc--HHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEecc----
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKV-IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR---- 407 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~--~~~~aaa~a~L~~-i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~---- 407 (480)
+++++++++.+....+..+|+++ |+.+++++++++. ++++++.+++++++++++++|++ ..++.+.++|+.
T Consensus 219 v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~--~~~~~~~~~rg~~~~~ 296 (392)
T PLN03227 219 TVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN--SSHPYALKLRNRLVIT 296 (392)
T ss_pred EecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh--cCCccccccccccccC
Confidence 88999998877655566788876 8778888877754 45668899999999999999987 356777777763
Q ss_pred ----ceeEEEEEecCCCcCCC-CHHHHHHHHHHHHHcCceeeccCc---------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 408 ----GFLLGVEFVTDRQLKTP-AKAETLYIMDKMKEMGVLVGKGGF---------YGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 408 ----g~~~~i~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv~v~~~~~---------~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
|+++++++.+++.+..+ .......+.+.|+++|+++.+.+. ....+|++....+|++|||+++++|
T Consensus 297 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l 376 (392)
T PLN03227 297 SDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVL 376 (392)
T ss_pred CCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 55788888432211100 011235788999999999864321 1246788888889999999999999
Q ss_pred HHHHhh
Q 011669 474 DYSLSK 479 (480)
Q Consensus 474 ~~~l~~ 479 (480)
++++++
T Consensus 377 ~~~~~~ 382 (392)
T PLN03227 377 GEAVEA 382 (392)
T ss_pred HHHHHH
Confidence 998865
No 99
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=1.3e-28 Score=247.97 Aligned_cols=338 Identities=18% Similarity=0.189 Sum_probs=232.3
Q ss_pred EEeeeccEEEeCCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCCCCC
Q 011669 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNL 158 (480)
Q Consensus 85 ~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~~~~ 158 (480)
+.++.|.++. .+|++||||.+| .++|| +||+|++++.+++.+..+... ....+...++++.|+++++.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-- 76 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-- 76 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--
Confidence 3577899996 899999999998 36895 789999999999987432211 12346788899999999863
Q ss_pred CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHH
Q 011669 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM 238 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~ 238 (480)
+..+++++|++++..+++.+. .+++.|++.++.|... .......+ .....++. .|
T Consensus 77 ~~~i~~~~G~~~~~~~l~~~~--~~gd~v~~~~~~~~~~-~~~~~~~g------------~~~~~~~~-------~d--- 131 (360)
T TIGR00858 77 EAALLFSSGYLANVGVISALV--GKGDLILSDALNHASL-IDGCRLSG------------ARVRRYRH-------ND--- 131 (360)
T ss_pred CCEEEECchHHHHHHHHHHhC--CCCCEEEEEccccHHH-HHHHHhcC------------CceEEecC-------CC---
Confidence 335666778999988877543 3566777776665433 32222221 11111111 12
Q ss_pred HHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC-cccccccCCCc
Q 011669 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGFEAHGVVP 317 (480)
Q Consensus 239 ~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~-~~~~~~~~~~p 317 (480)
.+++++.++.....++++++++++++++|...+ +++|.++|++||+++|+||+|+ +|..+.. .......++.+
T Consensus 132 -~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~ 205 (360)
T TIGR00858 132 -VEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKP 205 (360)
T ss_pred -HHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCc
Confidence 467777776432135789999999988887766 9999999999999999999997 3332211 11122334433
Q ss_pred c-----eeeeccccccCccccccccCHHHHHhhcCCC--ccccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Q 011669 318 D-----IVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKE 389 (480)
Q Consensus 318 D-----ivt~sK~~g~G~pig~v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~ 389 (480)
+ +.+|||++++ +.||+++++++++.+.... +..+.+.++..++++.++++.+.. ++..++++++.+++.+
T Consensus 206 ~~~~i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 283 (360)
T TIGR00858 206 EPVDIQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRA 283 (360)
T ss_pred cCCcEEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 3 5589999985 2389999999888775322 223344667778888888987654 3567788888888888
Q ss_pred HHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCCHH
Q 011669 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFTKE 464 (480)
Q Consensus 390 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~ 464 (480)
.|+++ +. ......|.++++.+.. ......+.+.|+++||++.++.. ..+++||+++..++++
T Consensus 284 ~L~~~----~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~ 350 (360)
T TIGR00858 284 GLEAL----GF-TLMPSCTPIVPVIIGD--------NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPG 350 (360)
T ss_pred HHHHc----CC-ccCCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHH
Confidence 88764 21 1223457788877621 22356788999999999976422 1358999999999999
Q ss_pred HHHHHHHHHH
Q 011669 465 DADYLVDVMD 474 (480)
Q Consensus 465 ~id~~l~~l~ 474 (480)
|+++++++|+
T Consensus 351 ~i~~~l~~l~ 360 (360)
T TIGR00858 351 DIDRLAEALK 360 (360)
T ss_pred HHHHHHHhhC
Confidence 9999999874
No 100
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=3.5e-28 Score=249.24 Aligned_cols=333 Identities=19% Similarity=0.196 Sum_probs=229.0
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc----ccc-CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST----VLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~----~~~-~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~ 171 (480)
+|+++++|.++.. +.|| +||+|++|+.+++++..+.. ..+ .++...+|+++|+++++. +..++++||++||
T Consensus 44 ~~~~~~~~~sn~y-l~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~--~~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSNDY-LGMG-QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK--ESALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECCCc-cCCC-CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC--CCEEEECcHHHHH
Confidence 5788999887544 3344 58999999999998864321 122 234678999999999974 4567888899999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
+.+|+......++ ++|+.+..+|+.....+...+.. +..+ +. +| .+++++.++...
T Consensus 120 ~~~i~~l~~~~~g-~~vi~~~~~h~s~~~~~~~~g~~----------~~~~--~~-------~d----~~~l~~~l~~~~ 175 (410)
T PRK13392 120 DAALSTLGKLLPG-CVILSDALNHASMIEGIRRSGAE----------KQVF--RH-------ND----LADLEEQLASVD 175 (410)
T ss_pred HHHHHHHhcCCCC-CEEEEehhhhHHHHHHHHHcCCe----------EEEE--eC-------CC----HHHHHHHHHhcc
Confidence 9999854221233 45666667888765544433321 1111 11 22 345556665433
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-Cc-cccCCCcccccccCC--Cccee--eeccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GF-ARTGSHFWGFEAHGV--VPDIV--TMAKG 325 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-gf-gr~G~~~~~~~~~~~--~pDiv--t~sK~ 325 (480)
.+++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |..| ..+ .+..++ .+|++ ||||+
T Consensus 176 ~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g-~g~-~~~~~~~~~~div~~tlsK~ 249 (410)
T PRK13392 176 PDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARG-GGI-AERDGLMDRIDMIQGTLAKA 249 (410)
T ss_pred CCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCC-Cch-hhhccCCCCCcEEEEEChHh
Confidence 347889999999999998876 9999999999999999999998 43 5554 222 233333 35666 89999
Q ss_pred ccc-CccccccccCHHHHHhhcCCCc--cccCCCcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 326 IGN-GIPLGAVVTTPEIAEVLTRRNY--FNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 326 ~g~-G~pig~v~~~~~~~~~l~~~~~--~~t~~~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
+|. | ||+++++++++.+..... ..+.+.+|++++++.++|+.++.. ...+++++..+++++.|+++ .+.
T Consensus 250 ~g~~G---G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-- 322 (410)
T PRK13392 250 FGCLG---GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN--GIP-- 322 (410)
T ss_pred hhccc---chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--CCC--
Confidence 983 4 789999999887654332 235556788899999999877543 33455667777777777664 222
Q ss_pred eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
...+.+.++.+.+. ......++.+.|+ ++||++.+... ...++||++++.+|++|+|.++++|++
T Consensus 323 -~~~~~~~~~~i~~~--------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 323 -VMPSPSHIVPVMVG--------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred -CCCCCCCEEEEEeC--------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 12345555555441 1223567888886 68999986421 236899999999999999999999999
Q ss_pred HHhh
Q 011669 476 SLSK 479 (480)
Q Consensus 476 ~l~~ 479 (480)
++++
T Consensus 394 ~~~~ 397 (410)
T PRK13392 394 IWDR 397 (410)
T ss_pred HHHH
Confidence 8765
No 101
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.6e-27 Score=240.99 Aligned_cols=326 Identities=18% Similarity=0.188 Sum_probs=222.6
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~~~ 173 (480)
..+|+..|.... ..+|.+.+++.+.+.........|+.....+|++.+++++ +.+.++|++|+|++|++..
T Consensus 27 ~~i~l~~~~~~~---~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNENPY---PPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCCCC---CCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 468888776543 3678999999988764322223455555667777777776 4456789999999999999
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
+++.... +++.|++..++|+++...+... |+..++++. ...|+.| .++++++++. .
T Consensus 104 ~~~~~~~--~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~~~~--~~~~~~d----~~~l~~~~~~---~ 159 (368)
T PRK03317 104 LLQAFGG--PGRTALGFVPSYSMHPIIARGT-------------HTEWVEGPR--AADFTLD----VDAAVAAIAE---H 159 (368)
T ss_pred HHHHhcC--CCCEEEEeCCChHHHHHHHHhc-------------CCeeEEccc--CCCCCCC----HHHHHHHHhc---c
Confidence 9987643 6788999999998866543321 333333322 1123333 5677777753 2
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cC
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NG 329 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G 329 (480)
+++++++...+|++|.+.+ .+++.++|+.+++++|+||+|++|++.| ........+..|+++ ||||.+| +|
T Consensus 160 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~-~~~~~~~~~~~~~~i~~~SfSK~~g~~G 234 (368)
T PRK03317 160 RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSG-TPSALTLLPEYPRLVVSRTMSKAFAFAG 234 (368)
T ss_pred CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccC-CcCHHHHHHhCCCEEEEEechhhhccch
Confidence 4455555666788888876 7778888888899999999999997766 333333334456666 8999998 79
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccce
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 409 (480)
+|+||+++++++++.+.... .+++.++++++++.++|+.. +.+.++.+++.+ .++.+.+...+++. ....+.|.
T Consensus 235 lRiG~~~~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~-~~~~l~~~L~~~g~-~~~~~~~~ 308 (368)
T PRK03317 235 GRLGYLAAAPAVVDALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAALRA-ERDRVVAWLRELGL-RVAPSDAN 308 (368)
T ss_pred hhhhhhhCCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHH-HHHHHHHHHHHCCC-EeCCCCCc
Confidence 99999999999998887543 46788999999999988742 334444433322 23333333333442 22344455
Q ss_pred eEEE-EEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 410 LLGV-EFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 410 ~~~i-~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
++.+ .+ . ....+.+.|+++||++.+.+. .+++||+. .+.++++.++++|+++++
T Consensus 309 ~~~~~~~-~----------~~~~~~~~l~~~Gv~v~~~~~-~~~iRi~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 309 FVLFGRF-A----------DRHAVWQGLLDRGVLIRDVGI-PGWLRVTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred EEEEecc-C----------CHHHHHHHHHHCCEEEEeCCC-CCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 4433 32 1 145688889999999987643 57899993 478899999999998875
No 102
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.1e-27 Score=241.22 Aligned_cols=340 Identities=14% Similarity=0.132 Sum_probs=230.6
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Al 175 (480)
.+..+||+..+... + +.+|.+.+++.+.+.... ...|. .....+++++++++++.+.++|++++|+++|+..++
T Consensus 26 ~~~~~i~l~~~~~~--~-~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 26 KDKEMIWMGQNTNH--L-GPHEEVREAMIRCIEEGE--YCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVM 100 (380)
T ss_pred hcCCeEEccCCCCC--C-CCCHHHHHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHH
Confidence 34568888776543 3 468999999999887532 12233 335788999999999877788999999999999999
Q ss_pred HHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
+.+.. +++.|++.+++|+....... .. |...+++|.. ..+.|..| .+++++.+. ++
T Consensus 101 ~~~~~--~gd~vl~~~p~y~~~~~~~~-~~------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~----~~ 157 (380)
T PRK06225 101 RAFLS--PGDNAVTPDPGYLIIDNFAS-RF------------GAEVIEVPIYSEECNYKLT----PELVKENMD----EN 157 (380)
T ss_pred HHhcC--CCCEEEEcCCCCcchHHHHH-Hh------------CceEEeeccccccCCccCC----HHHHHhhcC----CC
Confidence 87543 56789999999875432221 11 2333333311 11122223 456666664 24
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccc-cCCCcceeeeccccc-cCccc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA-HGVVPDIVTMAKGIG-NGIPL 332 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~-~~~~pDivt~sK~~g-~G~pi 332 (480)
++++++...++++|.+. +.+.+++|.++|++||+++|+||+|.+|.. + ....... .+...++.+|||.+| +|+|+
T Consensus 158 ~~~v~l~~p~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~-~~~~~~~~~~~~i~~~s~SK~~g~~G~Ri 234 (380)
T PRK06225 158 TRLIYLIDPLNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-E-HTLAAEYAPEHTVTSYSFSKIFGMAGLRI 234 (380)
T ss_pred ceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-c-CCchhhcCCCCEEEEeechhhcCCcccee
Confidence 66665444466777664 778899999999999999999999987743 2 1111111 123445668999998 79999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCc--eeeEecccee
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI--IGDVRGRGFL 410 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~--~~~v~g~g~~ 410 (480)
||+++++++++.+.... ..+++.|.++++++.++|+. .+.+.+++++..+..++.+.+..++++. +...+..|.+
T Consensus 235 G~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 235 GAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKV--KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred EEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 99999999988776532 35677888998888888763 2445556655555555555554444322 2234556888
Q ss_pred EEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 411 LGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|+++.... .....+.+.|.++||.+.++.. ..+++|++ +..+++++++++++|++++++
T Consensus 312 ~~~~~~~~~-------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 312 MVIDISEAG-------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIPREQVEVFCEEFPDVVET 376 (380)
T ss_pred EEEEccccc-------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCCHHHHHHHHHHHHHHHHH
Confidence 888874321 1245688888899999988632 23589999 456899999999999998865
No 103
>PRK07324 transaminase; Validated
Probab=99.96 E-value=1.8e-27 Score=240.78 Aligned_cols=343 Identities=15% Similarity=0.112 Sum_probs=232.0
Q ss_pred EeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC-CCCCEEEEeCCHHHHHH
Q 011669 94 FDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-GNLKVVFFTNSGTEANE 172 (480)
Q Consensus 94 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~-~~~~~v~f~~sGseA~~ 172 (480)
++..|..++++..|-... -.++.+ +|+.+++..... .........+|++.+++++. .+.++|++|+|+++|+.
T Consensus 21 ~~~~~~~~~~~~~~e~~~---~~~~~~-~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 21 YDIAESCIDSLTLEELLA---LAGKNP-EAFYQELGQKKL--TYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred cccccCCCCCCcHHHHHh---ccCcch-HHHHHHHhcCCc--cCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 466677777777665543 245567 888877765322 11123456788888888774 35678999999999999
Q ss_pred HHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 011669 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (480)
Q Consensus 173 ~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (480)
.++..... +++.|++..++|.......... |+..+.+|......|..| .+++++.+.
T Consensus 95 ~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~---- 151 (373)
T PRK07324 95 LVLYALVE--PGDHVISVYPTYQQLYDIPESL-------------GAEVDYWQLKEENGWLPD----LDELRRLVR---- 151 (373)
T ss_pred HHHHHhCC--CCCEEEEcCCCchhHHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHhCC----
Confidence 99986643 6788999999987654332222 233333332221223223 466666653
Q ss_pred CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccCCCcceeeeccccc-cCc
Q 011669 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIVTMAKGIG-NGI 330 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~~~pDivt~sK~~g-~G~ 330 (480)
.++++|++...+|++|.+. +++.+++|.++|++||+++|+||+|.++...+ ..... +..+....+.+|||.+| .|+
T Consensus 152 ~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~s~~~~~~~~I~~~s~SK~~~~~G~ 229 (373)
T PRK07324 152 PNTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG-STPSIADLYEKGISTNSMSKTYSLPGI 229 (373)
T ss_pred CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCCChhhccCCEEEEecchhhcCCccc
Confidence 2567777777778888764 88889999999999999999999999886654 22211 12222233458999999 799
Q ss_pred cccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccc-e
Q 011669 331 PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRG-F 409 (480)
Q Consensus 331 pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g-~ 409 (480)
|+||+++++++++.+.......+++.+++++.++..+|+. .+.+.++.++..+..++.+.+..++++.+..+.+.| .
T Consensus 230 RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~--~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~ 307 (373)
T PRK07324 230 RVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEH--RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVS 307 (373)
T ss_pred eeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceE
Confidence 9999999999998887766667788888998888887752 234455555544444555555555555444455554 4
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.++.+... ....++++.| .+.||++.||..| .+++||+ +..+++.+.+++++|.+++++
T Consensus 308 ~~~i~~~~~--------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 308 TSFVKLDVD--------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEEEeCCC--------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 556665321 1135567765 4779999998654 3689999 556899999999999998864
No 104
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=5.2e-27 Score=238.14 Aligned_cols=338 Identities=12% Similarity=0.112 Sum_probs=216.9
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcc--ccccccCChHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEANELA 174 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~l~e~L~~~~~--~~~~-~v~f~~sGseA~~~A 174 (480)
..|+|..|.+.. + .++.+.+++.+.+.... +....+..+...++++.+.+.++ .+.+ +|++|+|+++|++.+
T Consensus 21 ~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEPDF--V-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCCCC--C-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 368887777653 3 46678888888776421 11112223444555555554433 2333 799999999999999
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
++.... +++.|++.+++|+++........ ...+.++......|+.| .+++++++. ++
T Consensus 98 ~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d----~~~l~~~~~----~~ 154 (378)
T PRK07682 98 MRAIIN--PGDEVLIVEPSFVSYAPLVTLAG-------------GVPVPVATTLENEFKVQ----PAQIEAAIT----AK 154 (378)
T ss_pred HHHhCC--CCCEEEEeCCCchhhHHHHHHcC-------------CEEEEeecCCccCCCCC----HHHHHhhcC----cc
Confidence 886643 67899999999986554333222 22222221111122223 567777664 24
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccC---CCcceeeeccccc-cC
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHG---VVPDIVTMAKGIG-NG 329 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~---~~pDivt~sK~~g-~G 329 (480)
++++++...+|++|.+ .+++.+++|.++|++||+++|+||+|.+|.+.+ .+.++ ...+ ....+.+|||.++ .|
T Consensus 155 ~~~v~~~~p~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 232 (378)
T PRK07682 155 TKAILLCSPNNPTGAV-LNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTG 232 (378)
T ss_pred cEEEEEECCCCCcCcC-cCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChh
Confidence 5666555557778875 478889999999999999999999999887655 22221 1112 2223558999999 79
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec-
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG- 406 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g- 406 (480)
+|+||+++++++++.+.......+++.+++++.++.++|+.... +...+++++..+.+.+.|++ ++. ....+
T Consensus 233 lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~-~~~~p~ 307 (378)
T PRK07682 233 WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE----IGL-TCHVPG 307 (378)
T ss_pred hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----CCC-ccCCCC
Confidence 99999999999998886544445667888999888888863211 12233344444444444444 332 22233
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.|+++|+.+.... .....+.+.|+ ++||.+.+|..+ .+++||+. ..+++++++++++|++++++
T Consensus 308 g~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 308 GAFYAFPSISSTG-------LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--ATSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred eeEEEEEeccCCC-------CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHhh
Confidence 3556676653211 11355777765 789999987433 47899995 45799999999999999875
No 105
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=1.5e-26 Score=229.19 Aligned_cols=338 Identities=20% Similarity=0.269 Sum_probs=249.8
Q ss_pred EeeeccEEEeCCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHHhCCCCCC
Q 011669 86 VDGKMQYLFDENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 86 ~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
.+..+.++ -.+|++++||+++.+ ||- .||++++|+.+++++.+... ..+.++...+|.++|+++++ .+
T Consensus 27 ~~~~~~~~-~~~~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--~e 100 (388)
T COG0156 27 DRRQGLAI-RADGRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--AE 100 (388)
T ss_pred cccCCcce-ecCCceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CC
Confidence 33334444 355999999998875 344 48999999999999853221 14567889999999999994 56
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHH
Q 011669 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (480)
..++.+||..||..++-... +++++|+.+--.|........++......+.+ +|
T Consensus 101 ~al~f~SGy~AN~~~i~~l~---~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------------------nD---- 154 (388)
T COG0156 101 AALLFSSGFVANLGLLSALL---KKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------------------ND---- 154 (388)
T ss_pred cEEEEcccchhHHHHHHHhc---CCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------------------CC----
Confidence 78899999999999998544 56889999999999888777776654433332 35
Q ss_pred HHHHHHHHHccCCC--ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCC
Q 011669 240 AKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVV 316 (480)
Q Consensus 240 ~~~le~~i~~~~~~--~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~ 316 (480)
+++||+.++..... +...|++|.+.++.|.+.| |++|.+||+|||+++++||+|+ +|-.|+..-+ .++.|+.
T Consensus 155 ~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~GrG~~e~~g~~ 229 (388)
T COG0156 155 LDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNGRGLAEHFGLE 229 (388)
T ss_pred HHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCCccHHHHhCCC
Confidence 67888888752111 5789999999999999998 9999999999999999999996 6555532222 3566665
Q ss_pred cc---e--eeecccccc-CccccccccCHHHHHhhcCCC--ccccCCCcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHH
Q 011669 317 PD---I--VTMAKGIGN-GIPLGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYL 387 (480)
Q Consensus 317 pD---i--vt~sK~~g~-G~pig~v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l 387 (480)
++ | .||||++|+ | |++.++..+.+.+.... +..+-+.+|..++++.++|+++++. +..++++++..++
T Consensus 230 ~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~ 306 (388)
T COG0156 230 PEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFF 306 (388)
T ss_pred CccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 33 3 389999993 5 67999999999887643 3355567788889999999998864 6778888888888
Q ss_pred HHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCC
Q 011669 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFT 462 (480)
Q Consensus 388 ~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t 462 (480)
++.+... ++.. ......++.+.+. +...+..+...|+++||++.+..+ ....+|++++..+|
T Consensus 307 ~~~~~~~----~~~~-~~s~s~I~pv~~g--------d~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht 373 (388)
T COG0156 307 RSLLKAL----GLVL-LPSESPIIPVILG--------DEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHT 373 (388)
T ss_pred HHHHHhc----CCcc-CCCCCCeeeeEeC--------CHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCC
Confidence 8555443 1111 1222223334332 234577888899999999975421 23689999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011669 463 KEDADYLVDVMDYS 476 (480)
Q Consensus 463 ~~~id~~l~~l~~~ 476 (480)
++||+.++++|.++
T Consensus 374 ~~~I~~l~~~l~~~ 387 (388)
T COG0156 374 EEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999875
No 106
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.1e-27 Score=236.55 Aligned_cols=323 Identities=15% Similarity=0.130 Sum_probs=221.1
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
.++||.+|... +| .+|.|.+++.+++.... .|+.....++++.+++++..+.++|++++|+++++..+++...
T Consensus 30 ~~i~l~~n~~~--~~-~~~~v~~a~~~~~~~~~----~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 30 KIVKLASNENP--YG-PSPKVKEAIAAHLDELA----LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred ceEEecCCCCC--CC-CCHHHHHHHHHHHHHhh----cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 68999888765 56 47899999998876542 3445567889999999987667889999999999998877553
Q ss_pred hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE
Q 011669 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi 259 (480)
. +++.|++.+++|+++...+... |.....+|.. .++.| .+++++.++ +++++++
T Consensus 103 ~--~gd~v~~~~p~y~~~~~~~~~~-------------g~~~~~~~~~---~~~~d----~~~l~~~~~----~~~~~v~ 156 (359)
T PRK03158 103 N--PGTNTVMAEPTFSQYRHNAIIE-------------GAEVREVPLK---DGGHD----LEAMLKAID----EQTKIVW 156 (359)
T ss_pred C--CCCEEEEcCCCHHHHHHHHHHc-------------CCeEEEEecC---CCCcC----HHHHHHhcC----CCCCEEE
Confidence 3 6788999999998765443222 2222222221 12223 456666553 2566677
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccccCCCcceeeeccccc-cCcccccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEAHGVVPDIVTMAKGIG-NGIPLGAV 335 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~~~~~pDivt~sK~~g-~G~pig~v 335 (480)
+...+|++|.+.+ .+.+.++.+.|+ +|+++|+||+|..|...+..... .+..+...-+.||||.+| .|+|+||+
T Consensus 157 i~~p~NPtG~~~~-~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 234 (359)
T PRK03158 157 ICNPNNPTGTYVN-HEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYG 234 (359)
T ss_pred EeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehh
Confidence 6666888898865 334444444442 69999999999877443311111 111222223348999999 79999999
Q ss_pred ccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEE
Q 011669 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (480)
Q Consensus 336 ~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 415 (480)
++++++++.+.... .+++.|++++.++.++|+ +.++.+++++..+..++.+.+..++++ +...++.|+++|+++
T Consensus 235 v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~ 308 (359)
T PRK03158 235 IASEELIEKLNIAR--PPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDT 308 (359)
T ss_pred cCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEEC
Confidence 99999998876543 357889999999998885 344555555544455555555444543 334566788888876
Q ss_pred ecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 416 VTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.. ....+.+.|+++||++.++..+ .+++||+ ..+.+++++++++|+++
T Consensus 309 ~~----------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 309 GR----------DANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKEQNDKIIELLKEL 358 (359)
T ss_pred CC----------CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHHHHHHHHHHHh
Confidence 21 1356888888999999997544 4789999 34899999999999875
No 107
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.96 E-value=2.4e-26 Score=232.65 Aligned_cols=332 Identities=15% Similarity=0.075 Sum_probs=231.6
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~ 171 (480)
.++++|||+++.+.. |+ .||+|++++.+.+++.+.... .+.+....+|.++|+++++ .+.+++++||..||
T Consensus 100 ~~r~~l~FsSndYLG-L~-~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--~e~all~sSGy~AN 175 (476)
T PLN02955 100 RFKKLLLFSGNDYLG-LS-SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--KEDCLVCPTGFAAN 175 (476)
T ss_pred CCceEEEeeccCccC-CC-CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--CCcEEEECChHHHH
Confidence 457899998775532 32 589999999999998754321 2345677889999999994 46789999999999
Q ss_pred HHHHHHHHh-----------hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHH
Q 011669 172 ELAIMMARL-----------YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYA 240 (480)
Q Consensus 172 ~~Alk~ar~-----------~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~ 240 (480)
..+|..... ..+++.+|+.+...|......+.+.... .++....++. +| +
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~--------~~a~~~~f~H-------ND----~ 236 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ--------GNVEVFVYRH-------CD----M 236 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcccc--------CCceEEEeCC-------CC----H
Confidence 999986421 0245668888999998877776554210 0111221111 45 6
Q ss_pred HHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC-cccccccCCCcce
Q 011669 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGFEAHGVVPDI 319 (480)
Q Consensus 241 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~-~~~~~~~~~~pDi 319 (480)
++|+++++... ++.++|++|++.++.|.+.| |++|.++|++||++||+||+|+ +|..|.. ....+++++.+|+
T Consensus 237 ~~Le~~L~~~~-~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e~~g~~~di 310 (476)
T PLN02955 237 YHLNSLLSSCK-MKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAEEFNCEADV 310 (476)
T ss_pred HHHHHHHHhCC-CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHHHhCCCCCC
Confidence 78888887543 35689999999999999887 9999999999999999999997 4344421 1224566776665
Q ss_pred ----eeeccccccCccccccccCHHHHHhhcCCCccccC--CCcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHH
Q 011669 320 ----VTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTF--GGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 320 ----vt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~ 392 (480)
.||||++|. +-|++++++++++.+........| +.+|..+++++++++++..+ ...++++++.+++++.+
T Consensus 311 ~ii~~TLsKA~G~--~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~- 387 (476)
T PLN02955 311 DLCVGTLSKAAGC--HGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS- 387 (476)
T ss_pred cEEEEeCccchhc--cCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc-
Confidence 589999982 125689999888888753322222 44566777788899887544 44566666666666521
Q ss_pred HhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCCHHHHH
Q 011669 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFTKEDAD 467 (480)
Q Consensus 393 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id 467 (480)
.++. ...++.+.+ .+...+..+.+.|+++|+++.+..+ ....+||+.+..+|++||+
T Consensus 388 ----G~~~------~sPI~pI~i--------g~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId 449 (476)
T PLN02955 388 ----GVDI------SSPIISLVV--------GNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK 449 (476)
T ss_pred ----CCCC------CCCEEEEEe--------CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH
Confidence 1111 123334444 2334567789999999999975321 2357999999999999999
Q ss_pred HHHHHHHHHHh
Q 011669 468 YLVDVMDYSLS 478 (480)
Q Consensus 468 ~~l~~l~~~l~ 478 (480)
.++++|.++..
T Consensus 450 ~lv~~L~~~~~ 460 (476)
T PLN02955 450 KLITALSSCLD 460 (476)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 108
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.9e-27 Score=240.66 Aligned_cols=337 Identities=17% Similarity=0.137 Sum_probs=218.9
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC----C--CCC-CEEEEeCCHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM----P--GNL-KVVFFTNSGTEA 170 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~----~--~~~-~~v~f~~sGseA 170 (480)
|..++||..|.+.. + .++.+.+++.+.+.+... ..|......+|++.|++++ + .+. ++|++|+|+++|
T Consensus 31 ~~~~i~l~~g~p~~--~-~~~~~~~~~~~~~~~~~~--~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 31 GHKMIDLSIGNPDM--P-PADFVREEMVHTANQKES--YGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred CCCeEEeCCCCCCC--C-CCHHHHHHHHHHHhcccc--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 56789998887653 3 468888888887654211 1122233444555555443 2 355 689999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..+++.... +++.|++.+++|.++...+... |+..+++|....+.|..| .+++++.+.
T Consensus 106 l~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~~~~~~~~d----~~~l~~~~~-- 164 (399)
T PRK07681 106 LVHLPMVYAN--PGDIILVPDPGYTAYETGIQMA-------------GATSYYMPLKKENDFLPD----LELIPEEIA-- 164 (399)
T ss_pred HHHHHHHhCC--CCCEEEECCCCccchHHHHHhc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc--
Confidence 9998876543 6788999999997765544332 333344333212223223 456665553
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cc---cCCCcceeeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EA---HGVVPDIVTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~---~~~~pDivt~sK~~ 326 (480)
.++++|++...+|++|.+. +++.+++|.++|++||+++|+||+|.+|...+.....+ .. .+....+.+|||.+
T Consensus 165 --~~~k~v~l~~P~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 241 (399)
T PRK07681 165 --DKAKMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY 241 (399)
T ss_pred --ccceEEEEeCCCCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 2566666664477788764 88889999999999999999999999885444111111 11 12233355899999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
+ .|+|+||+++++++++.+........++.+.+.+.++.++|+.. +.+.++.++..+..++.+.+..+++++.....
T Consensus 242 ~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p 319 (399)
T PRK07681 242 SLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP 319 (399)
T ss_pred CCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 8 89999999999999988876544456778888888888887631 23333333333333333433333444221123
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
..|+++|+++... ....++.+.|++ +||.+.++..+ .+++||+. ..+++++++++++|.+
T Consensus 320 ~~g~f~~~~l~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 320 AGSMFVWAEIPKG--------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIAL--VQDEEVLQQAVENIRN 384 (399)
T ss_pred CeeeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence 4578888887421 113567777776 89999987543 35899994 4688999999999987
No 109
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=1.4e-26 Score=237.17 Aligned_cols=340 Identities=16% Similarity=0.145 Sum_probs=219.9
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcc--ccccccCChHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEANELA 174 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~l~e~L~~~~~--~~~~-~v~f~~sGseA~~~A 174 (480)
..|||..|.+.. ..++.+.+++.+.+.+.. +....+..+....+++.+.+..+ .+.+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~P~~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGFPNF---DGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCCCCC---CCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 579999888764 247889999988877521 11111222333444444444333 2344 699999999999998
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
+.... .+++.|++.+++|..+....... |...+.++... ..|..| .+++++.+. .+
T Consensus 132 ~~~l~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~-~~~~~~----~~~l~~~~~----~~ 187 (413)
T PLN00175 132 ILGLI--NPGDEVILFAPFYDSYEATLSMA-------------GAKIKTVTLRP-PDFAVP----EDELKAAFT----SK 187 (413)
T ss_pred HHHhC--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEEECCc-ccCCCC----HHHHHHhcC----cC
Confidence 88543 36789999999997665443322 22222222110 013333 567777764 25
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccC---CCcceeeeccccc-cC
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHG---VVPDIVTMAKGIG-NG 329 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~---~~pDivt~sK~~g-~G 329 (480)
+++|++.+.+|++|.+ .+++.+++|.++|++||+++|+||+|..|.+.+ ....+ +..+ ...-+.+|||.++ .|
T Consensus 188 ~k~i~i~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~~G 265 (413)
T PLN00175 188 TRAILINTPHNPTGKM-FTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSLTG 265 (413)
T ss_pred ceEEEecCCCCCCCcC-CCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccCcc
Confidence 6778887778888876 488899999999999999999999999875544 22111 1112 2223447999999 89
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec-cc
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG-RG 408 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g-~g 408 (480)
+|+||+++++++++.+.......+++.+++.+.++.++|+.. +.+.++.++.-+..++.+.+..++++. ....+ .|
T Consensus 266 ~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~ 342 (413)
T PLN00175 266 WKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP--ESYYEELKRDYSAKKDILVEGLKEVGF-KVYPSSGT 342 (413)
T ss_pred hheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCC-eecCCCee
Confidence 999999999999988876555567888999999998888632 233333333333333333333333332 22233 35
Q ss_pred eeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY-------GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 409 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-------~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+++|+.+...+. .....+++.|+ ++||.+.|+..| .+++||+. +.+++++++++++|.+.+++
T Consensus 343 ~f~~~~~~~~~~------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 343 YFVMVDHTPFGF------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred EEEEEeccccCC------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cCCHHHHHHHHHHHHHHHhC
Confidence 567877632110 01346777765 679999987433 35899995 56899999999999998864
No 110
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=236.04 Aligned_cols=339 Identities=15% Similarity=0.133 Sum_probs=221.0
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcc--ccccccCChHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~l~e~L~~~~~--~~~~~v~f~~sGseA~~~Al 175 (480)
.+++|..|.+.. ..++.+.+++.+.+.... +....+..+....+++.+.+.++ .+.++|++++|+++|+..++
T Consensus 25 ~~i~l~~g~~~~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESDL---PTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCCC---CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 468888887753 247899999988776532 11112233445556665555544 45678999999999999999
Q ss_pred HHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcC-CCCCCChHHHHHHHHHHHHccCCCc
Q 011669 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
+.... +++.|++.+++|.......... |+..+.+|.... ..|..| .+++++.++ .+
T Consensus 102 ~~l~~--~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~d----~~~l~~~~~----~~ 158 (382)
T PRK06108 102 QALVG--PGDEVVAVTPLWPNLVAAPKIL-------------GARVVCVPLDFGGGGWTLD----LDRLLAAIT----PR 158 (382)
T ss_pred HHhcC--CCCEEEEeCCCccchHHHHHHC-------------CCEEEEeeCCCCCCCccCC----HHHHHHhcC----cc
Confidence 86643 5678999999987654332211 333333332111 122223 566776664 25
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc-CCCccc-ccccCCCcc---eeeeccccc-c
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWG-FEAHGVVPD---IVTMAKGIG-N 328 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~-G~~~~~-~~~~~~~pD---ivt~sK~~g-~ 328 (480)
++++++...+|++|.+ .+.+.+++|.++|++||+++|+||+|.+|... +..... ....+.... +.+|||.++ +
T Consensus 159 ~~~i~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (382)
T PRK06108 159 TRALFINSPNNPTGWT-ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMT 237 (382)
T ss_pred ceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCc
Confidence 6667676667888876 48889999999999999999999999988543 211111 111111122 347999998 7
Q ss_pred CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec
Q 011669 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (480)
Q Consensus 329 G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 406 (480)
|+|+||+++++++++.+.......+++.+++.+.++.++|+...+ ++..+++++..+++.+.|++ ++.+....+
T Consensus 238 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p 313 (382)
T PRK06108 238 GWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA----LPGVEVAKP 313 (382)
T ss_pred ccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCC
Confidence 999999999999988876544445677888999888888863211 22334444444444444433 332333333
Q ss_pred c-ceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 407 R-GFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 407 ~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
. |+++|+.+... .....+++.|+ ++||.+.++..+ .+++||++.. +++++++++++|.+++++
T Consensus 314 ~~g~~~~~~l~~~--------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 314 DGAMYAFFRIPGV--------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLAR 382 (382)
T ss_pred CeeEEEEEeCCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHhC
Confidence 3 55667776321 11356777764 679999887433 4689999765 899999999999998753
No 111
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=235.85 Aligned_cols=344 Identities=13% Similarity=0.072 Sum_probs=220.8
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCC--CCC-CEEEEeCCHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMP--GNL-KVVFFTNSGTEANE 172 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~--~~~-~~v~f~~sGseA~~ 172 (480)
+..+||..|... .+ ..+|.+.+++.+.+.... +....+..+....+++.+++.++ .+. ++|++|+|+++|+.
T Consensus 39 ~~~i~l~~g~~~-~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVD-AH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCC-CC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 456688777654 23 356788998888776421 11122233455666667766655 344 78999999999999
Q ss_pred HHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCC---cCCCCCCChHHHHHHHHHHHHc
Q 011669 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP---YRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 173 ~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~---~~~~~~~d~~~~~~~le~~i~~ 249 (480)
.+++... .+++.|++.+++|.+........ |...++++.. ....|+.| .++++++++.
T Consensus 117 ~~~~~l~--~~Gd~Vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~~~~d----~~~l~~~~~~ 177 (405)
T PRK06207 117 LAVAATV--ARGDKVAIVQPDYFANRKLVEFF-------------EGEMVPVQLDYLSADKRAGLD----LDQLEEAFKA 177 (405)
T ss_pred HHHHHhc--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEEeccccCcccCCCcC----HHHHHHhhhh
Confidence 9998654 36789999999998765443322 2222222211 01123333 5677777753
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc----CCCcceeeeccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH----GVVPDIVTMAKG 325 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~----~~~pDivt~sK~ 325 (480)
++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|..|...|...-.+... +...-+.+|||.
T Consensus 178 ----~~k~v~l~~P~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (405)
T PRK06207 178 ----GVRVFLFSNPNNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKT 252 (405)
T ss_pred ----cCeEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhh
Confidence 355555444467777764 78889999999999999999999999886555211111111 112233479999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
++ .|+|+||+++++++++.+........++.+.+.+.++.++|+. .+.+.++..+.....++.+.+..++++.+...
T Consensus 253 ~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 330 (405)
T PRK06207 253 ESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE--PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVR 330 (405)
T ss_pred ccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 99 8999999999999988887644444556677788888777752 12222222222222334443333344333333
Q ss_pred -eccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 405 -RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 405 -~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
...|+++|+++.... .....+.+.|+ ++||.+.||..| .+++||+.. .+++++++++++|.++++
T Consensus 331 ~p~gg~fl~~~l~~~~-------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 331 APQAGSYLFPRLPRLA-------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIE 401 (405)
T ss_pred CCCeeEEEEEeCcccC-------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 334788899874211 11356777776 689999998543 468999954 589999999999999886
Q ss_pred h
Q 011669 479 K 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 402 ~ 402 (405)
T PRK06207 402 R 402 (405)
T ss_pred H
Confidence 5
No 112
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=2e-26 Score=232.95 Aligned_cols=329 Identities=19% Similarity=0.230 Sum_probs=223.5
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
++++++||.++... +| .+|.+.+++.+.+... ..|+.....++++.++++++.+.++|++++|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNENP--LG-PSPKAIEAIRAAADEL----HRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCCC--CC-CCHHHHHHHHHHHHhh----cCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 57789999987644 45 5788999999877653 23444445789999999997767789999999999988776
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
... .+++.|++.+++|.++....... |.....+|. ..+..| .+++++.++ ++++
T Consensus 103 ~l~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~---~~~~~~----~~~l~~~~~----~~~~ 156 (367)
T PRK02731 103 AYL--GPGDEVIYSEHGFAVYPIAAQAV-------------GAKPVEVPA---KDYGHD----LDAMLAAVT----PRTR 156 (367)
T ss_pred Hhc--CCCCEEEEecCCHHHHHHHHHHc-------------CCeEEEecc---cCCCCC----HHHHHHHhC----CCCc
Confidence 542 35688999999997654433221 233333322 112233 566777664 2566
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHH--hCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cCc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGI 330 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~--~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~ 330 (480)
+|++..+++++|.+.+ ++++.++|+. +|+++|+||+|..+.+.+....++...+..++++ +|||.+| +|+
T Consensus 157 ~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 232 (367)
T PRK02731 157 LVFIANPNNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGL 232 (367)
T ss_pred EEEEeCCCCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCccc
Confidence 7777777888888865 4555555554 4999999999987765431121222222234444 7999998 799
Q ss_pred cccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEecccee
Q 011669 331 PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (480)
Q Consensus 331 pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~ 410 (480)
|+||+++++++++.+.... .+++.+++++.++.+.|+ .+++.++.++....+++.+.+..++++. ....+.|.+
T Consensus 233 RiG~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~~ 306 (367)
T PRK02731 233 RVGYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGL-EYIPSVGNF 306 (367)
T ss_pred ceeeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCceE
Confidence 9999999999988876543 356678888888887775 3444444544444445555544444442 223456888
Q ss_pred EEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 411 LGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG--NVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~--~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|+.+... ....++.+.|.++||++.++..++ +++||++ .+.++++.++++|+++++.
T Consensus 307 ~~i~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 307 ILVDFDDG--------KDAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GTEEENRRFLAALKEFLAA 366 (367)
T ss_pred EEEECCCC--------CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHhc
Confidence 89887221 124678888999999999875543 6899995 3789999999999998763
No 113
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=6.2e-27 Score=235.92 Aligned_cols=324 Identities=14% Similarity=0.135 Sum_probs=230.7
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
+++..||+..|... +| .+|.+.+++.+.+... ..|+.....+|++.|+++++.+.++|++++|++|++..+++
T Consensus 27 ~~~~~i~l~~nen~--~~-~~~~v~~a~~~~~~~~----~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNENP--FG-CSPRVLDELQKSWLDH----ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCCC--CC-CCHHHHHHHHHHHHhc----CcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 35678998887654 44 6789999998876553 24666677889999999998788899999999999999988
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
.... +++.|++.+++|.++...+... |+..+.+|.. .+..| .+++++.++. +++
T Consensus 100 ~l~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~---~~~~d----~~~l~~~~~~----~~~ 153 (366)
T PRK01533 100 AVLK--AGDNIVTAGATFPQYRHHAIIE-------------GCEVKEVALN---NGVYD----LDEISSVVDN----DTK 153 (366)
T ss_pred HhcC--CCCEEEEcCCcHHHHHHHHHHc-------------CCEEEEeecC---CCCcC----HHHHHHHhCc----CCc
Confidence 6543 6678999999998766544322 3333333321 11123 5677776642 445
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccccCCCcceeeeccccc-cCccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEAHGVVPDIVTMAKGIG-NGIPL 332 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~~~~~pDivt~sK~~g-~G~pi 332 (480)
++++...+|++|.+. +.+.+++|.++|++++ ++|+||+|..|...+...-. .+..+...-+-||||.+| +|+|+
T Consensus 154 ~v~i~~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRi 231 (366)
T PRK01533 154 IVWICNPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRV 231 (366)
T ss_pred EEEEeCCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHH
Confidence 555555577788775 7778888999998876 57779999877533211001 111122223347999999 89999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
||+++++++++.+.... .+++.|.+++.++.++|+ ++++.+++++.....++.+.++.+.++ +....+.|.|+|
T Consensus 232 G~~i~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~ 305 (366)
T PRK01533 232 GYAVGHEELIEKLNVVR--LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIF 305 (366)
T ss_pred hHHhCCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEE
Confidence 99999999998886543 457889999999998885 455666666665666666666665554 334456788999
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+.. ...+.+.|+++||++++. .+++||+ ..+.++++.++++|+++++
T Consensus 306 ~~~~~-----------~~~~~~~l~~~GI~Vr~~---~~~iRis---~~~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 306 LPVEN-----------GGEIYEACAHAGFIIRPF---PNGVRIT---VGTREQNEGVISVLQQHFE 354 (366)
T ss_pred EeCCC-----------HHHHHHHHHHCCcEEccC---CCceEEe---CCCHHHHHHHHHHHHHHHH
Confidence 98621 356888999999999973 5789999 6689999999999998875
No 114
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=1.2e-26 Score=236.20 Aligned_cols=342 Identities=13% Similarity=0.091 Sum_probs=214.9
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----C--CCCC-EEEEeCCHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGs 168 (480)
+|+.++||..|.... + .++.+.+++.+.+.... ...|. .....+|++++++++ + .+.+ +|++|+|++
T Consensus 28 ~~~~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~ 102 (388)
T PRK07366 28 AGKELIDLSLGSSDL--P-APAHALEAIAQSLHDPS--THGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQ 102 (388)
T ss_pred cCCCeEEeCCCCCCC--C-CCHHHHHHHHHHHhCcc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcH
Confidence 466788988876543 3 47899999988775421 11232 233455666666554 3 3455 699999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+|+..++++... +++.|++.+++|.++...+... |...+++|....+.|..| .+++++.+.
T Consensus 103 ~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~ 163 (388)
T PRK07366 103 EGTAHLPLAVLN--PGDFALLLDPGYPSHAGGVYLA-------------GGQIYPMPLRAENDFLPV----FADIPTEVL 163 (388)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEECCCccCCCCC----HHHHHHhhc
Confidence 999998886543 6788999999998766544433 333333332211223223 344544442
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC-cccc---ccc-CCCcceeeec
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWGF---EAH-GVVPDIVTMA 323 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~-~~~~---~~~-~~~pDivt~s 323 (480)
.+++++++.+.+|++|.+. +.+.+++|.++|++||++||+||+|..|...+.. ...+ +.. ....-+-+||
T Consensus 164 ----~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 238 (388)
T PRK07366 164 ----AQARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLS 238 (388)
T ss_pred ----ccceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecc
Confidence 2456667667778888764 8889999999999999999999999988554411 1111 111 1112234899
Q ss_pred cccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee
Q 011669 324 KGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (480)
Q Consensus 324 K~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 402 (480)
|.+| .|+|+||+++++++++.+........++..+..+.++.++|. ..+++.++.++.-+..++.+.+..+++++..
T Consensus 239 K~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~ 316 (388)
T PRK07366 239 KSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQIGWPV 316 (388)
T ss_pred cccCCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 9998 899999999999999887654433334443333445555553 2234444444443334444444444444322
Q ss_pred eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 403 ~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
.....|+++|+++.... .....++++.| .++||.+.++..| .+++||+. +.+++++++++++|.+++
T Consensus 317 ~~p~~g~f~~~~~~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 317 PLPEATMYVWAKLPEPW------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL--VHDPDILEEAVERIAAFL 388 (388)
T ss_pred cCCCeeEEEEEECCccc------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHhC
Confidence 33556888899874210 00134566665 5779999997433 36899994 568999999999998753
No 115
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.4e-26 Score=233.19 Aligned_cols=326 Identities=20% Similarity=0.184 Sum_probs=220.4
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
+|..++||..|.... ..+|.+.+++.+.+... ..|+.....+|++.++++++.+.++|++|+|+++++..+++
T Consensus 28 ~~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~----~~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNENPH---GPSPAAVEAIREAAERV----HSYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCCCC---CCCHHHHHHHHHHHhhh----hcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 456799998876543 35788999998876542 23455557789999999998788899999999999999988
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
.... +++.|++.+++|..+....... +. ++..++.+. ...|..+ .+++++..+ +++
T Consensus 101 ~~~~--~gd~V~v~~P~y~~~~~~~~~~-g~----------~~~~~~l~~--~~~~~~~----~~~~~~~~~-----~~k 156 (357)
T PRK14809 101 AMLD--PGDTVLVPDPGFAYYGMSARYH-HG----------EVREYPVSK--ADDFEQT----ADTVLDAYD-----GER 156 (357)
T ss_pred HhcC--CCCEEEEeCCChHHHHHHHHHc-CC----------eEEEEeccc--CcCCCcC----HHHHHHhhc-----CCc
Confidence 6543 6788999999986444322111 10 222222221 1123222 233433321 345
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cCcccccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAV 335 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v 335 (480)
++++.+.+|++|.+. +.+.+++|.++|++ ++++|+||+|..|...++.....+..+....+.||||.++ .|+|+||+
T Consensus 157 ~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 234 (357)
T PRK14809 157 IVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYA 234 (357)
T ss_pred EEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheee
Confidence 666667778888775 66677788887765 7899999999988654411111222233344558999998 89999999
Q ss_pred ccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEE
Q 011669 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (480)
Q Consensus 336 ~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 415 (480)
++++++++.+.... .+++.+++++.+++++|+ ++++.++.++..+..++.+.+..... ..+..|+++|+++
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~g~f~~~~~ 305 (357)
T PRK14809 235 VVPEEWADAYARVN--TPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAP----TWESAGNFVLAEV 305 (357)
T ss_pred ecCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCc----cCCCCCCEEEEEC
Confidence 99999988887543 467788888888888774 34444444444444444444433222 1246788888876
Q ss_pred ecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 416 VTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+ ..++.+.|.++||.+.++..+ .+++||+. .+++++++++++|+++++
T Consensus 306 ~~-----------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~---~~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 306 GD-----------ASAVAEAAQERGVIVRDCTSFGLPECIRITC---GTREETERAVEVLNEVLA 356 (357)
T ss_pred CC-----------HHHHHHHHHHCCEEEEECccCCCCCeEEEec---CCHHHHHHHHHHHHHHhc
Confidence 21 356778888999999998655 36899993 368999999999999875
No 116
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.8e-26 Score=233.44 Aligned_cols=350 Identities=15% Similarity=0.086 Sum_probs=218.9
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC----C---CCCC-EEEEeCCHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM----P---GNLK-VVFFTNSGT 168 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~----~---~~~~-~v~f~~sGs 168 (480)
.|+.++|+..|.... + .+|.+.+++.+.+.... ...|+.....+|++.+++.+ + .+.+ +|++|+|++
T Consensus 42 ~~~~~i~L~~g~p~~--~-~~~~~~~~l~~~~~~~~--~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~ 116 (410)
T PRK06290 42 PDMELIDMGVGEPDE--M-ADESVVEVLCEEAKKPE--NRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116 (410)
T ss_pred CCCCeEEcCCCCCCC--C-CCHHHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence 566789998887643 4 46788888887664321 12233334455555555553 3 2344 799999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+++..++..... +++.|++.+++|.++...+... |...+.+|....+.|..| .+++++.+.
T Consensus 117 ~al~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~l~~~~~ 177 (410)
T PRK06290 117 PALAMLPSCFIN--PGDVTLMTVPGYPVTGTHTKYY-------------GGEVYNLPLLEENNFLPD----LDSIPKDIK 177 (410)
T ss_pred HHHHHHHHHhCC--CCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEecCCCcCCcCC----HHHHHHhhc
Confidence 999998876543 6788999999998765443322 333333332212223223 456666654
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC--Cccccc-ccCCCcceeeeccc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS--HFWGFE-AHGVVPDIVTMAKG 325 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~--~~~~~~-~~~~~pDivt~sK~ 325 (480)
.++++|++...+|++|.+. +.+.+++|.++|++||++||+||+|..+...+. .+.... ..+...-+.+|||.
T Consensus 178 ----~~~k~i~l~nP~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~ 252 (410)
T PRK06290 178 ----EKAKLLYLNYPNNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKA 252 (410)
T ss_pred ----ccceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhh
Confidence 2566777665578888775 888999999999999999999999998744331 111111 11222334589999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
++ .|+|+||+++++++++.+.........+.+.+++.++.++|+. .++.++.++..+..++.+.+..+++++ ...
T Consensus 253 ~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 328 (410)
T PRK06290 253 YNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH---PEITEKIREKYSRRLDKLVKILNEVGF-KAE 328 (410)
T ss_pred cCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHHHHHHHhCCC-eec
Confidence 97 7999999999999998877544444555556778877777752 233333333333333333333333442 222
Q ss_pred ec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcC-ceeeccCcCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhC
Q 011669 405 RG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMG-VLVGKGGFYGNVFRITPP-LCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 405 ~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~v~~~~~~~~~iRi~p~-~~~t~~~id~~l~~l~~~l~~~ 480 (480)
++ .|+++|+.+....... -......++++.|+++| +++.|+..+++++||+.. ...++++.++++++|++.|.++
T Consensus 329 ~p~g~f~l~v~lp~~~~~~-~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 329 MPGGTFYLYVKAPKGTKSG-IKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCeeeEEEEECCCccccC-CCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 33 3556677764321000 00012457888888875 555676556789999943 1258899999999999998754
No 117
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=8.6e-26 Score=230.99 Aligned_cols=354 Identities=13% Similarity=0.062 Sum_probs=221.8
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhc---cccccccCChHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI---QHSTVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEA 170 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~l~e~L~~~~~--~~~~-~v~f~~sGseA 170 (480)
.|..++||..|.+.. ..++.+.+++.+.+... .+....+.......+++.+.+..+ .+.+ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPDG---PTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCCC---CCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 456789998876543 34566777777655432 111112222344455555544433 3455 79999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..+++.... +++.|++.+++|.+........ |...+++|..+...|+-|.+...+.++++++..
T Consensus 108 l~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQAITN--PGDVAIVPDPAYPIHSQAFILA-------------GGNVHKMPLEYNEDFELDEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhc-------------CCEEEEEeccccccCccChhhhhhHHHHHHhhc
Confidence 9999986543 6789999999998765544332 333333332222234445444445677777643
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCc---cccccc-CCCcceeeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF---WGFEAH-GVVPDIVTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~---~~~~~~-~~~pDivt~sK~~ 326 (480)
. .+++++++...+|++|.+ .+.+.+++|.++|++|++++|+||+|..|-..+... ...+.. +....+.+|||.+
T Consensus 173 ~-~~~~~i~~~~P~NPTG~~-~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 250 (403)
T PRK08636 173 S-PKPKYVVVNFPHNPTTAT-VEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSY 250 (403)
T ss_pred c-CCceEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEeccccc
Confidence 2 246666666556777766 488889999999999999999999999875444111 112111 2222334799999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
| .|+|+||+++++++++.+........++.+.+.+.++..+++. .+.+.+++++.....++.+.+...++++.....
T Consensus 251 ~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p 328 (403)
T PRK08636 251 NMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQKP 328 (403)
T ss_pred CCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 7 8999999999999988876544334456666677766655531 233444444433333444433333333221233
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHHH-HHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..|+++|+.+..... ......+.+. ++++||.+.|+..| .+++||+. ..+++++++++++|.++++.
T Consensus 329 ~~g~~~~~~l~~~~~-----~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 329 RASMFVWAKIPEPAR-----HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIAL--IENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CcceEEEEECCCccC-----CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHh
Confidence 468888998742110 0013456655 45789999997433 36899995 46899999999999998864
No 118
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=5.1e-26 Score=234.71 Aligned_cols=333 Identities=14% Similarity=0.076 Sum_probs=214.6
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhCC---CCCCEEEEeCCHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMP---GNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~~---~~~~~v~f~~sGseA~~~Al 175 (480)
..+||..|.+.. ...|.+.+++.+.+... ..|.. ....+|++.+++++. ...++|++|+|+++|+..++
T Consensus 86 ~~i~L~~g~p~~---~~~p~~~~~~~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~ 158 (431)
T PRK15481 86 PLHDLAGGNPDP---QRLPDLSRYFARLSRTP----RLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLL 158 (431)
T ss_pred hhhhhhcCCCCh---hHhHHHHHHHHHhhhhh----hhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHH
Confidence 456766654322 12366777776654432 12332 234556666666653 12358999999999999999
Q ss_pred HHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCce
Q 011669 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~ 255 (480)
+.... +++.|++.+|+|.+....+... |...+++|... ..+ | .++++++++. ++
T Consensus 159 ~~l~~--pgd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~-~g~--~----~~~l~~~~~~----~~ 212 (431)
T PRK15481 159 CAHLL--PGDSVAVEDPCFLSSINMLRYA-------------GFSASPVSVDA-EGM--Q----PEKLERALAQ----GA 212 (431)
T ss_pred HHhCC--CCCEEEEeCCCcHHHHHHHHHc-------------CCeEEeeccCC-CCC--C----HHHHHHHHhc----CC
Confidence 86554 6789999999998776554433 22223332210 011 2 5678877752 45
Q ss_pred EEEEEcc-cCCCCcceeCCCChHHHHHHHHHHh-CCEEEEcccccCccccCCCcccccc-cCCCcceeeeccccccCccc
Q 011669 256 AGFLSES-IQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWGFEA-HGVVPDIVTMAKGIGNGIPL 332 (480)
Q Consensus 256 a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~tgfgr~G~~~~~~~~-~~~~pDivt~sK~~g~G~pi 332 (480)
+++++.| .||++|.+. +.+.+++|.++|++| ++++|+||+|..|...+ ..-.... .+...-+-||||.++.|+|+
T Consensus 213 k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~GlRi 290 (431)
T PRK15481 213 RAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSP-YHSVIPQTTQRWALIRSVSKALGPDLRL 290 (431)
T ss_pred CEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCC-CCCCCcCCCCCEEEEeeeccccCCCcee
Confidence 6666663 667777764 888899999999999 99999999999885433 1111111 11122234899999999999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
||+++++++++.+.......+++.+.+++.++.++|+.-.-+.+.+.+++.-+..++.+.+..++++.....+..|+++|
T Consensus 291 G~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~ 370 (431)
T PRK15481 291 AFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLW 370 (431)
T ss_pred EEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEE
Confidence 99999999988886543334566788999999888863111122222222222233333333333333222455688889
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY-----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+..+ ...+.+.|.++||.+.+|..| ++++||+... .+++++++++++|.+++.
T Consensus 371 ~~l~~~----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 371 LPLDTD----------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred EECCCC----------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 887321 356778888999999997544 2579999653 578999999999999875
No 119
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.2e-26 Score=231.00 Aligned_cols=346 Identities=14% Similarity=0.128 Sum_probs=220.8
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~ 171 (480)
+..++||..|.... ..+|++.+++.+.+..... .........+|++.|++++ ..+.+++++++|+++|+
T Consensus 30 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 104 (393)
T PRK05764 30 GRDVISLGAGEPDF---DTPEHIKEAAIEALDDGKT--KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQAL 104 (393)
T ss_pred cCCEEEeCCCCCCC---CCCHHHHHHHHHHHhcCCC--CcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHH
Confidence 34578888888654 3578999999887764311 1112333455666666554 23456899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
..++..+.. .++.|++.+++|.++...+... |...+.++......|..| .+++++.++
T Consensus 105 ~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~l~--- 162 (393)
T PRK05764 105 YNAFMALLD--PGDEVIIPAPYWVSYPEMVKLA-------------GGVPVFVPTGEENGFKLT----VEQLEAAIT--- 162 (393)
T ss_pred HHHHHHhcC--CCCEEEecCCCCcchHHHHHHc-------------CCEEEEEecCcccCCcCC----HHHHHHhhC---
Confidence 998886543 6778999999987654433222 233333322211223223 466777664
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc-----ccCCCcceeeecccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE-----AHGVVPDIVTMAKGI 326 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~-----~~~~~pDivt~sK~~ 326 (480)
+++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|..+...+..+.... ..+....+.+|||.+
T Consensus 163 -~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (393)
T PRK05764 163 -PKTKALILNSPSNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAY 240 (393)
T ss_pred -ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccc
Confidence 2455555555567778764 677899999999999999999999987754442111211 112222334799999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
+ .|+|+||+++++++++.+.......+.+.+++++.++.+.|+. .+++.++.++..+..++.+.+..++++.+....
T Consensus 241 ~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 318 (393)
T PRK05764 241 AMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK 318 (393)
T ss_pred cCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence 9 8999999999999988876544345567788888888888752 223333333333333444444444442233333
Q ss_pred cc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFYG--NVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~--~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+. |.++|+.+..... .......++.+.|. ++||.+.++..++ +++||+ +..+++++++++++|.+++++
T Consensus 319 ~~g~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 319 PEGAFYVFPNVSKLLG---KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEGLERIERFLES 391 (393)
T ss_pred CCcceEEEEecccccc---cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 44 4567777643211 00001355666664 6799999876554 799999 557899999999999998865
No 120
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=1.8e-25 Score=228.18 Aligned_cols=341 Identities=12% Similarity=0.045 Sum_probs=214.9
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc-cccccCChHHHHHHHHHHHhCC---CCC-CEEEEeCCHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHAIADFAEALASKMP---GNL-KVVFFTNSGTEAN 171 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~l~e~L~~~~~---~~~-~~v~f~~sGseA~ 171 (480)
.|+.+|||..|.+.. + .++.+.+++.+.+..... ....+..+....+++.+.+.++ .+. ++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~p~~--~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGEPKH--P-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCCCCC--C-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 478899998887653 2 468888988876653311 1112223344455555544434 334 3899999999999
Q ss_pred HHHHHHHHhh-cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 172 ELAIMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 172 ~~Alk~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
..+++..... ..++.|++.+++|.++....... |+..+++|......|+.| .+.+++.+..
T Consensus 104 ~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~vp~~~~~~~~~d----~~~l~~~~~~- 165 (396)
T PRK09147 104 FAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-------------GAEPYFLNCDPANNFAPD----FDAVPAEVWA- 165 (396)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-------------CCEEEEeccCccccCccC----HHHHHHHHhh-
Confidence 9999866541 11678999999997765443322 333334433222234334 4566655532
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC-Cccc-cc---cc-----CCCccee
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWG-FE---AH-----GVVPDIV 320 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~-~~~~-~~---~~-----~~~pDiv 320 (480)
+++++++...+|++|.+ .+++.+++|.++|++||+++|+||+|..|...+. .... .. .. +...-+.
T Consensus 166 ---~~k~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 241 (396)
T PRK09147 166 ---RTQLLFVCSPGNPTGAV-LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFH 241 (396)
T ss_pred ---ccEEEEEcCCCCCcCcc-CCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEe
Confidence 45666665567778876 4889999999999999999999999998754431 1111 10 11 1122234
Q ss_pred eeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 321 TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 321 t~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
+|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+.+. .+++..+.++..+..++.+.+...++
T Consensus 242 S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 242 SLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWN---DEAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred ccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 7999987 799999999999998887654444556778888888777763 22333322222222222222222222
Q ss_pred ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----------CCEEEEeCCCCCCHHHHHH
Q 011669 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----------GNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 400 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----------~~~iRi~p~~~~t~~~id~ 468 (480)
........|+++|+++.. ....+++.|+ ++||.+.+|..| .+++||+ ++.+++++++
T Consensus 318 ~~~~~p~~g~f~~~~~~~----------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~--~~~~~~~l~~ 385 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVPG----------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIA--LVAPLAECVE 385 (396)
T ss_pred cCCCCCCeeEEEEEECCC----------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEE--ecCCHHHHHH
Confidence 111234568888998731 1245666665 689999987533 3689999 4567899999
Q ss_pred HHHHHHHHHh
Q 011669 469 LVDVMDYSLS 478 (480)
Q Consensus 469 ~l~~l~~~l~ 478 (480)
++++|.+++.
T Consensus 386 ~l~rl~~~~~ 395 (396)
T PRK09147 386 AAERIVDFCR 395 (396)
T ss_pred HHHHHHHHhc
Confidence 9999998774
No 121
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=229.59 Aligned_cols=344 Identities=13% Similarity=0.069 Sum_probs=218.8
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEANE 172 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~~ 172 (480)
..++||..|.+.. +. ++.+.+++.+.+..... ..++.....+|++.+++++ +.+.++|++|+|+++|+.
T Consensus 33 ~~~i~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 107 (391)
T PRK08361 33 ENVISLGIGEPDF--DT-PKNIKEAAKRALDEGWT--HYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY 107 (391)
T ss_pred cCeEEcCCCCCCC--CC-CHHHHHHHHHHHhcCCC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH
Confidence 3579988877553 32 68889988887654311 1112344455666666554 244678999999999999
Q ss_pred HHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 011669 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (480)
Q Consensus 173 ~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (480)
.+++.... +++.|++.+++|.+....+.. . |...+++|....+.|..| .+++++.++.
T Consensus 108 ~~~~~l~~--~g~~Vlv~~p~y~~~~~~~~~-~------------g~~~~~v~~~~~~~~~~d----~~~l~~~i~~--- 165 (391)
T PRK08361 108 LAFESLLE--EGDEVIIPDPAFVCYVEDAKI-A------------EAKPIRIPLREENEFQPD----PDELLELITK--- 165 (391)
T ss_pred HHHHHhcC--CCCEEEEcCCCCcccHHHHHH-c------------CCEEEEEecCCccCCCCC----HHHHHHhccc---
Confidence 99886533 667899999998765432221 1 233333332222223334 5677776652
Q ss_pred CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc--CCCcceeeeccccc-cC
Q 011669 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH--GVVPDIVTMAKGIG-NG 329 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~--~~~pDivt~sK~~g-~G 329 (480)
+++++++...+|++|.+. +.+.+++|.++|+++++++|+||+|..|...+......... +...-+.+|||.+| .|
T Consensus 166 -~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 243 (391)
T PRK08361 166 -RTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTG 243 (391)
T ss_pred -ccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcH
Confidence 456666665677888764 77889999999999999999999998875433111111111 11122337999999 89
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEecc-c
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR-G 408 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g 408 (480)
+|+||+++++++++.+.......+++.+.+.+.++.++|+......+.++.++.-+..++.+.+..++++.+...... |
T Consensus 244 lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~ 323 (391)
T PRK08361 244 WRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGA 323 (391)
T ss_pred hhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEE
Confidence 999999999998887754433345677788888888777532111233333333333334333333334333333444 5
Q ss_pred eeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 409 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
+++|+.+.... ....++.+.|+ ++||++.++..| .+++||+.. .+++++++++++|.++++++
T Consensus 324 ~~~~~~l~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 324 FYVFANIDETG-------MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEEL 391 (391)
T ss_pred EEEEEECCCCC-------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhcC
Confidence 67788774211 11345666665 579999987543 368999954 68889999999999998764
No 122
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=8.7e-26 Score=229.83 Aligned_cols=339 Identities=14% Similarity=0.075 Sum_probs=217.8
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM------PGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~ 171 (480)
|..++++..|.... + .++.+.+++.+.+.... ....+.....++++.+++++ +.+.++|++|+|+++|+
T Consensus 31 ~~~~i~l~~g~~~~--~-~~~~v~~a~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 105 (387)
T PRK08960 31 GHDVIHLEIGEPDF--T-TAEPIVAAGQAALAAGH--TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGAL 105 (387)
T ss_pred CCCeEEeCCCCCCC--C-CCHHHHHHHHHHHhcCC--CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHH
Confidence 44678887777642 2 47899999988876421 11112333445555555543 24567899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
..++.+.. .+++.|++.+++|.+.......... .+..++. ...+.|..| .+++++.++.
T Consensus 106 ~~~~~~~~--~~gd~vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~--~~~~~~~~d----~~~l~~~~~~-- 164 (387)
T PRK08960 106 LLASSLLV--DPGKHWLLADPGYPCNRHFLRLVEG-----------AAQLVPV--GPDSRYQLT----PALVERHWNA-- 164 (387)
T ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHHhcCC-----------eEEEEec--CcccCCCCC----HHHHHHHhCc--
Confidence 99987653 3678999999999876554432211 1222222 111223333 5667776642
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG- 327 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g- 327 (480)
+...++++.| +|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ .... .....++++ +|||.+|
T Consensus 165 -~~~~i~i~~p-~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~-~~~~--~~~~~~~vi~~~S~SK~~g~ 238 (387)
T PRK08960 165 -DTVGALVASP-ANPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGV-DAAS--VLEVDDDAFVLNSFSKYFGM 238 (387)
T ss_pred -cceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCC--hhhccCCEEEEeecccccCC
Confidence 2344555555 56777664 78889999999999999999999999875433 2211 122334544 6999998
Q ss_pred cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee-eEec
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRG 406 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g 406 (480)
.|+|+||+++++++++.+.......+.+.+.+.+.++.++|+. ..+++.++.++.-+..++.+.+..+++++.. ....
T Consensus 239 ~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 239 TGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred cccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 8999999999999988876544445667788888888888752 1123333333333333444444444444322 2244
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY-----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.|+++|+++.... .....+++.|+ ++||.+.||..| ++++||+.. .+.+++.+++++|.++++
T Consensus 318 g~~f~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFG-------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccC-------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence 5778888874310 01355776654 689999987433 368999965 478999999999988764
No 123
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6.4e-26 Score=229.14 Aligned_cols=328 Identities=16% Similarity=0.157 Sum_probs=223.2
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
+.++++..|... +| .+|++.+++.+.+... ..|+.+...+|+++|+++++.+.++|++++|+++++..++...
T Consensus 32 ~~~~~l~~~~~~--~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 32 PFRARIGANESG--FG-PSPSVIAAMREAAAEI----WKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred cceeEecCCCCC--CC-CCHHHHHHHHHHHHHh----hcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 346788777543 34 5789999998876542 2244444678999999999777788999999999999988865
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
.. +++.|++.+++|.+........ |...+.+|. ... ..| .+++++.+. ..+++++
T Consensus 105 ~~--~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~vp~--~~~-~~~----~~~l~~~~~---~~~~~~i 159 (369)
T PRK08153 105 VE--PGDPVVTSLGAYPTFNYHVAGF-------------GGRLVTVPY--RDD-RED----LDALLDAAR---RENAPLV 159 (369)
T ss_pred cC--CCCEEEECCCcchHHHHHHHHc-------------CCeEEEeeC--CCC-CCC----HHHHHHHhc---ccCCcEE
Confidence 43 6788999999998766433222 222222221 100 112 344443332 2345556
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcc---eeeeccccc-cCccccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD---IVTMAKGIG-NGIPLGA 334 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pD---ivt~sK~~g-~G~pig~ 334 (480)
++...+|++|.+. +.+.+++|.++|+ +|+++|+||+|..|++.| ....+.. ..++ +.||||.+| +|+|+||
T Consensus 160 ~l~~P~NPtG~~~-~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~-~~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~ 234 (369)
T PRK08153 160 YLANPDNPMGSWH-PAADIVAFIEALP-ETTLLVLDEAYCETAPAG-AAPPIDT--DDPNVIRMRTFSKAYGLAGARVGY 234 (369)
T ss_pred EEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc-cchhhhh--cCCCEEEEecchHhccCcchheee
Confidence 5533456667665 6677777777776 499999999999887655 2222211 2234 348999999 8999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+.... .+++.|+++++++.++|+ ++++.++.++..+..++.+.+..++.+. ......|.+++++
T Consensus 235 ~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~ 308 (369)
T PRK08153 235 AIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAID 308 (369)
T ss_pred eecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEE
Confidence 999999998776543 357789999999998885 4556666777666777777666655553 2335567777776
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceee-ccCc-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVG-KGGF-YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~~~-~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+..+ ......+.+.|.++||.+. ++.. ..+++||+. .++++++.++++|++++..
T Consensus 309 ~~~~-------~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~---~~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 309 CGRD-------GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSC---GPDEELDLFAEALPEALEA 365 (369)
T ss_pred CCCC-------cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 5311 1235678888999999996 4322 246899993 3899999999999998754
No 124
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=226.97 Aligned_cols=336 Identities=15% Similarity=0.092 Sum_probs=221.8
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC--------CCCCEEEEeCCHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP--------GNLKVVFFTNSGTEA 170 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~--------~~~~~v~f~~sGseA 170 (480)
..++|+..|.... ..+|.+.+++.+.+..... ...|+.....+|++.|++++. .+.++|++|+|++++
T Consensus 28 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 28 IQLDRLDTNEFPY---DLPPDLKQKLAWLYQQGIE-SNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred cceeEecCCCCCC---CCCHHHHHHHHHHHhhccc-ccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 4689988887643 3568999999987665311 123555566778888887765 456789999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..++..... .+.+.|++.+++|.++...+... |...+.++.. ...|+.| .++++++++..
T Consensus 104 l~~~~~~~~~-~g~~~Vlv~~P~y~~~~~~~~~~-------------g~~~~~~~~~-~~~~~~d----~~~l~~~~~~~ 164 (374)
T PRK02610 104 IRSLLIATCL-GGEGSILVAEPTFSMYGILAQTL-------------GIPVVRVGRD-PETFEID----LAAAQSAIEQT 164 (374)
T ss_pred HHHHHHHHcC-CCCCeEEEcCCChHHHHHHHHHc-------------CCEEEEecCC-cccCCCC----HHHHHHHHHhh
Confidence 9877764332 23347999999998766554333 2333333321 1123334 56777777531
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cC
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NG 329 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G 329 (480)
...++++|++.+.+|++|.+. +.+.+++|.++| +++++|+||+|..|.... ............-+-||||.+| .|
T Consensus 165 ~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~G 240 (374)
T PRK02610 165 QNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTT-LVGELAQHPNWVILRTFSKAFRLAA 240 (374)
T ss_pred cCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccc-hHHHHhcCCCEEEEEecchhccCcc
Confidence 123677777666688888875 677788888877 499999999999874221 1111111111122448999997 79
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccce
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 409 (480)
+|+||+++++++++.+.... ..++.+.+++.++.++|+. .+.+.+++++..+. ++.+.+..+.++.+......|+
T Consensus 241 lRiG~~v~~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~ 315 (374)
T PRK02610 241 HRVGYAIGHPELIAVLEKVR--LPYNLPSFSQLAAQLALEH--RQELLAAIPEILQE-RDRLYQALQELPQLRVWPSAAN 315 (374)
T ss_pred cceeeeecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcce
Confidence 99999999999988876543 3456788888888887763 23444444444443 3444444444433333456688
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
++|+++... .....+++.|+++||++.++ .+++||+.. +.+++++++++|+++++.+
T Consensus 316 f~~~~l~~~--------~~~~~~~~~l~~~gi~v~~~---~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 316 FLYLRLSQD--------AALAALHQALKAQGTLVRHT---GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EEEEeCCCC--------CCHHHHHHHHHHCCEEEEeC---CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 888887321 12466788889999999764 468999943 4678999999999988753
No 125
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=1.8e-25 Score=224.39 Aligned_cols=337 Identities=14% Similarity=0.072 Sum_probs=211.8
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc-ccccCChHHHHHHHHHHHhCC--CCCC-EEEEeCCHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS-TVLYLNHAIADFAEALASKMP--GNLK-VVFFTNSGTEANELAI 175 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~~~~~~~~~~~l~e~L~~~~~--~~~~-~v~f~~sGseA~~~Al 175 (480)
+.+||..|.+.. + ..|++.+++.+........ ...+..+....+++.+.+..+ .+.+ +|++|+|+++|+..++
T Consensus 1 ~~~~~~~g~p~~--~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 1 RLFDFGTGDPKE--P-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CeEeccCCCCCC--C-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 467888887653 3 4788999998876542111 111112333444444443333 3455 8999999999999888
Q ss_pred HHHHhhc-CCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 176 MMARLYT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 176 k~ar~~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
..+.... +++.|++.+++|.++...+... |+..++++......|.-| .++++++++. +
T Consensus 78 ~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~~----~ 136 (350)
T TIGR03537 78 LVFIDPEEDRRRVIFGTPGYPVYERGALFA-------------GGEPTAVKLKKEDGFLLR----LEKVEKSILE----E 136 (350)
T ss_pred HHHcCCCCCCceEEEcCCCCcchHHHHHhc-------------CCEEEEcccCcccCCccC----HHHHHHhhhh----c
Confidence 7554311 1268999999998766655432 334444433222233223 5677777652 4
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC--CCcceeeeccccc-cCcc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIG-NGIP 331 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~--~~pDivt~sK~~g-~G~p 331 (480)
++++++.+.+|++|.+ .+.+.+++|.++|++||+++|+||+|..+...+ ........+ ...-+.+|||.++ .|+|
T Consensus 137 ~~~i~i~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~GlR 214 (350)
T TIGR03537 137 TKIVWINYPHNPTGAT-APRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVGIENVLAFHSLSKRSGMTGYR 214 (350)
T ss_pred cEEEEEeCCCCCcCcc-cCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcCcCCEEEEeecccccCCcccc
Confidence 6667777678888876 488889999999999999999999998653322 221111111 1222337899997 7999
Q ss_pred ccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeE
Q 011669 332 LGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (480)
Q Consensus 332 ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 411 (480)
+||+++++++.+.+.......+.+.+++.+.++.+++. .+++.++.++.-+..++.+.+...+++........|+++
T Consensus 215 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~ 291 (350)
T TIGR03537 215 SGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYL 291 (350)
T ss_pred ceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEE
Confidence 99999999988877654333445566677777766664 233333333333333333433333343221222336667
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
|+++... .....+++.|.++||++.++..| .+++||+. ..+++++++++++|++
T Consensus 292 ~~~~~~~--------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPSG--------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred EEECCCC--------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 8877321 12457888899999999987544 46899994 5688999999998875
No 126
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=3.7e-25 Score=222.35 Aligned_cols=325 Identities=16% Similarity=0.158 Sum_probs=216.5
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
..++||..|... +|. +|.+.+++.+.+... ..|+.+...+|+++++++++.+.++|++|+|+++++..+++..
T Consensus 19 ~~~~~l~~~~~~--~~~-p~~~~~a~~~~~~~~----~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANINP--LGV-PESLKQAITENLDKL----VEYPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCCC--CCC-CHHHHHHHHHHHHhh----hcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 457899776543 343 789999998877543 2355555678999999999888889999999999999998853
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
..+.|++.+++|+.+....... |...+.+|....+.|..| +++.+.+. . +++++
T Consensus 92 ----~~~~v~i~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d-----~~~~~~~~---~-~~~~v 145 (354)
T PRK06358 92 ----KPKKVLILAPTFAEYERALKAF-------------DAEIEYAELTEETNFAAN-----EIVLEEIK---E-EIDLV 145 (354)
T ss_pred ----CCCcEEEecCChHHHHHHHHHc-------------CCeeEEEeCccccCCCcc-----HHHHHhhc---c-CCCEE
Confidence 2358999999998766544322 222222222111123223 12222232 2 34544
Q ss_pred -EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC---CCcceeeeccccc-cCcccc
Q 011669 259 -LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG---VVPDIVTMAKGIG-NGIPLG 333 (480)
Q Consensus 259 -i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~---~~pDivt~sK~~g-~G~pig 333 (480)
+++| +|++|.+ .+.+.+++|.++|++||+++|+||+|..|...+...-.+...+ ...-+-+|||.+| .|+|+|
T Consensus 146 ~~~~P-~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG 223 (354)
T PRK06358 146 FLCNP-NNPTGQL-ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLG 223 (354)
T ss_pred EEeCC-CCCCCCc-cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhhe
Confidence 5566 6777776 4888899999999999999999999998865541111111112 2222447999999 899999
Q ss_pred ccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 334 AVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 334 ~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
|++++ +++++.+.... ..++.+.+++.++.++|+ ++++.++..+..+..++.+.+..++++.+....+.|.++|
T Consensus 224 ~lv~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~ 298 (354)
T PRK06358 224 YGLTSNKNLAEKLLQMR--EPWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIF 298 (354)
T ss_pred eeecCCHHHHHHHHHhC--CCCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEE
Confidence 99985 67777776543 356778888888888875 2333333222223333334333334433444456788888
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+.+.. ..++.+.|+++||.+.++..+ .+++||+ ..++++.++++++|++++
T Consensus 299 ~~~~~-----------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLEK-----------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred EEcCc-----------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 87631 256888899999999998554 3689999 568899999999999875
No 127
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=1.7e-25 Score=228.80 Aligned_cols=349 Identities=14% Similarity=0.099 Sum_probs=220.4
Q ss_pred CCEEEeccCCcccc--cCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhCC-----CCCCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATV--CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMP-----GNLKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~~-----~~~~~v~f~~sGse 169 (480)
|+.+++|..|.+.. .++ .++.+.+++.+.+... +. ..| +.....+|++.+++++. .+.++|++++|+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~-~~-~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~ 106 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSG-KY-NGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSH 106 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhcc-CC-CCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHH
Confidence 46788988887642 233 4688999998877652 11 123 34455667777777664 34578999999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+..++..... +++.|++.+++|..+....... |+..+.++......|+.| .+.+++.++.
T Consensus 107 al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~-------------g~~v~~~~~~~~~~~~~d----~~~l~~~~~~ 167 (401)
T TIGR01264 107 AIEMCIAALAN--AGQNILVPRPGFPLYETLAESM-------------GIEVKLYNLLPDKSWEID----LKQLESLIDE 167 (401)
T ss_pred HHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHc-------------CCEEEEeecCCccCCCCC----HHHHHHHhcc
Confidence 99999986643 6778999999997654332222 333333322111123333 5667666642
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-CC--Ccceeeecccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GV--VPDIVTMAKGI 326 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~~--~pDivt~sK~~ 326 (480)
+++++++...+|++|.+. +.+.+++|.++|+++|+++|+||+|.+|.+.+..+..+... .. ..-+-+|||.+
T Consensus 168 ----~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 168 ----KTAALIVNNPSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRW 242 (401)
T ss_pred ----CceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccC
Confidence 345666655577788764 78889999999999999999999999886555211111111 11 12234799997
Q ss_pred c-cCccccccccCH------HHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 327 G-NGIPLGAVVTTP------EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 327 g-~G~pig~v~~~~------~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
+ .|+|+||+++++ ++++.+..... ..++.+++++.++.+.|+.. .+++.++.++..+..++.+.+..+.++
T Consensus 243 ~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~ 320 (401)
T TIGR01264 243 LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT-PQEYFDGTLSVLESNAMLCYGALAAVP 320 (401)
T ss_pred CCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7 799999999874 34443332211 24566788888888877531 233444433333333444444444443
Q ss_pred cee-eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 400 IIG-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 400 ~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.+. .....|+++|+++..... +.......+++.|+ ++||++.++..+ .+++||+. ..+++++++++++|.+
T Consensus 321 ~~~~~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~rl~~ 395 (401)
T TIGR01264 321 GLRPVMPSGAMYMMVGIEMEHF---PEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVL--TVPVVMMEEACSRIQE 395 (401)
T ss_pred CCcccCCCeeeEEEEEeccccc---CCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEE--cCCHHHHHHHHHHHHH
Confidence 233 235568889998743100 11111345666665 789999988654 47999994 5678999999999999
Q ss_pred HHhhC
Q 011669 476 SLSKM 480 (480)
Q Consensus 476 ~l~~~ 480 (480)
+++++
T Consensus 396 ~~~~~ 400 (401)
T TIGR01264 396 FCERH 400 (401)
T ss_pred HHhcc
Confidence 88763
No 128
>PLN02187 rooty/superroot1
Probab=99.95 E-value=2.4e-25 Score=230.46 Aligned_cols=353 Identities=14% Similarity=0.091 Sum_probs=217.7
Q ss_pred CCCCEEEeccCCcccccC-CCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhC------CCCCCEEEEeCCH
Q 011669 96 ENGRRYLDAFGGIATVCC-GHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSG 167 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~------~~~~~~v~f~~sG 167 (480)
.+++.+|++..|.+...- =-.++++.+++.+.+.... . ..| +.....+|++.+++++ +.+.++|++|+|+
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK-G-NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC-C-CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 346789998887554210 0134678888888776431 1 123 3444556666666654 2456789999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++|+..++..... +++.|++.+++|.++...+... |.....++......|+.| .+++++++
T Consensus 141 ~~al~~~~~~l~~--pGd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~~~l~~~~~~~~d----~~~l~~~~ 201 (462)
T PLN02187 141 NQGIEIVFESLAR--PNANILLPRPGFPHYDARAAYS-------------GLEVRKFDLLPEKEWEID----LEGIEAIA 201 (462)
T ss_pred HHHHHHHHHHhcC--CCCEEEEeCCCCccHHHHHHHc-------------CCEEEEEeCccccCCccC----HHHHHHhc
Confidence 9999999986643 6789999999998764433222 222222222111234444 56777766
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-CC--Ccceeeecc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GV--VPDIVTMAK 324 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~~--~pDivt~sK 324 (480)
+ .+..+.++++|. |++|.+ .+.+.+++|.++|++||+++|+||+|..|.+.+..+.....+ +. ..-+-+|||
T Consensus 202 ~---~~~~~v~i~nP~-NPTG~v-~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK 276 (462)
T PLN02187 202 D---ENTVAMVVINPN-NPCGNV-YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISK 276 (462)
T ss_pred C---CCcEEEEEeCCC-CCCCCc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchh
Confidence 4 234566667764 667765 488899999999999999999999999875544222122111 11 122337999
Q ss_pred ccc-cCccccccccC-H-HH---HHhhcCCCccccC--CCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHH
Q 011669 325 GIG-NGIPLGAVVTT-P-EI---AEVLTRRNYFNTF--GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396 (480)
Q Consensus 325 ~~g-~G~pig~v~~~-~-~~---~~~l~~~~~~~t~--~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~ 396 (480)
.++ .|+|+||++++ + .+ ++.+........+ +.+.+.+.++.++|+. ..+++.++.++..+..++.+.+..+
T Consensus 277 ~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~-~~~~~l~~~~~~l~~~r~~l~~~L~ 355 (462)
T PLN02187 277 GWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK-ADKNFFAKKNKILKHNVDLVCDRLK 355 (462)
T ss_pred hcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988 79999999984 3 22 2333322222222 4578899998888863 1234444444433333444444444
Q ss_pred hcCceee--EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHH
Q 011669 397 KYGIIGD--VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDV 472 (480)
Q Consensus 397 ~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~ 472 (480)
+++.... ....|+++|+.+...... ........+.+.+.++||++.||..| .++|||+ +...++.+++++++
T Consensus 356 ~~~~~~~~~~P~gg~fl~~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~~~e~l~~al~r 431 (462)
T PLN02187 356 DIPCVVCPKKPESCTYLLTKLELSLMD--NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGVEAHMLEDALER 431 (462)
T ss_pred hCCCCcCCCCCCEeEEEEeecChhhCC--CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCCCHHHHHHHHHH
Confidence 4443322 234468888876321000 00011233455668899999998654 4799999 55679999999999
Q ss_pred HHHHHhh
Q 011669 473 MDYSLSK 479 (480)
Q Consensus 473 l~~~l~~ 479 (480)
|.+++++
T Consensus 432 L~~~l~~ 438 (462)
T PLN02187 432 LKGFCTR 438 (462)
T ss_pred HHHHHHH
Confidence 9998864
No 129
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.1e-25 Score=225.45 Aligned_cols=331 Identities=14% Similarity=0.085 Sum_probs=213.2
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM------PGNLKVVFFTNSGTEANE 172 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~~ 172 (480)
.++||..|.+.. + .+|++.+++.+.+... ...|.. ....+|++.+++++ +.+.++|++|+|+++|+.
T Consensus 30 ~~i~l~~g~p~~--~-~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 30 DIIDLSLGDPDL--I-TDESIINAAFEDAKKG---HTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CcEEcCCCCCCC--C-CCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 468888776543 3 3577877666544321 122322 22344555555443 345678999999999999
Q ss_pred HHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 011669 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (480)
Q Consensus 173 ~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (480)
.++..... +++.|++.+++|.++...+.... ...+++|......|..| .+++++.++.
T Consensus 104 ~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d----~~~l~~~~~~--- 161 (384)
T PRK06348 104 LALQSILD--PGDEVIIHEPYFTPYKDQIEMVG-------------GKPIILETYEEDGFQIN----VKKLEALITS--- 161 (384)
T ss_pred HHHHHhcC--CCCEEEEeCCCCcchHHHHHHcC-------------CEEEEecCCcCcCCcCC----HHHHHHhhCc---
Confidence 99987643 67889999999987665544332 22223221111122223 5677777642
Q ss_pred CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccc-cCCCcceeeeccccc-
Q 011669 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEA-HGVVPDIVTMAKGIG- 327 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~-~~~~pDivt~sK~~g- 327 (480)
++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ .... +.. .+...-+.||||.++
T Consensus 162 -~~~~v~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l 238 (384)
T PRK06348 162 -KTKAIILNSPNNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAM 238 (384)
T ss_pred -CccEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCC
Confidence 455566656677788764 88899999999999999999999999885433 2111 111 112223448999999
Q ss_pred cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHH----HHHHHHHHHHHHHhHHhcCceee
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNA----HVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~----~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
.|+|+||+++++++++.+.......+++.+++++.++..+|+. .+.+.+++ +++.+++.+.|+ .++.+..
T Consensus 239 ~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~~L~----~~~~~~~ 312 (384)
T PRK06348 239 TGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH--RDTIVPLIKEEFQKRLEYAYKRIE----SIPNLSL 312 (384)
T ss_pred ccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHh----cCCCcee
Confidence 8999999999999988877655556788899999998888863 23333333 333333444443 3332322
Q ss_pred Eec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 404 VRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 404 v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
..+ .|+++|+++.... .....+++.|+ +.||.+.+|..| .+++||+. +.+++++++++++|.+.
T Consensus 313 ~~p~gg~~~~~~~~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 313 HPPKGSIYAFINIKKTG-------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ccCCeeEEEEEecccCC-------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 333 3667788874211 11355777765 579999987544 36899995 56899999999999763
No 130
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=2.1e-25 Score=224.40 Aligned_cols=331 Identities=13% Similarity=0.109 Sum_probs=218.4
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Al 175 (480)
.++..++||..|... +| .+|.+.+|+.+.+... ..|+.....++++.++++++.+.++|++++|+++++..++
T Consensus 17 ~~~~~~i~l~~~~~~--~~-~p~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~ 89 (356)
T PRK08056 17 ISPDQLLDFSANINP--LG-MPVSLKRAIIDNLDCA----ERYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVV 89 (356)
T ss_pred CChhhEEEeccccCC--CC-CCHHHHHHHHHHHHhc----ccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence 356778999877544 44 6789999998877653 2355555789999999999877789999999999999988
Q ss_pred HHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCce
Q 011669 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~ 255 (480)
+.. .++ ++++..++|..+...+... |+..+.+|......|..| +++++.+. .++
T Consensus 90 ~~l---~~g-~viv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~-----~~~~~~~~----~~~ 143 (356)
T PRK08056 90 SGL---KPR-RAMIVTPGFAEYRRALQQV-------------GCEIRRYSLREADGWQLT-----DAILEALT----PDL 143 (356)
T ss_pred HHh---CCC-CEEEeCCCcHHHHHHHHHc-------------CCeEEEEecccccCCCcc-----HHHHHhcc----CCC
Confidence 854 244 5788889886654332221 333333332211223222 22333332 356
Q ss_pred EEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcceeeeccccc-cCcccc
Q 011669 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLG 333 (480)
Q Consensus 256 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig 333 (480)
++|++...+|++|.+ .+++.+++|.++|++||+++|+||+|.+|...+..... +...+...-+.+|||.++ .|+|+|
T Consensus 144 k~v~l~~p~NPTG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 222 (356)
T PRK08056 144 DCLFLCTPNNPTGLL-PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLG 222 (356)
T ss_pred CEEEEeCCcCCCCCC-CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhhe
Confidence 666666667778875 58889999999999999999999999988544311111 122222222347999999 899999
Q ss_pred ccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 334 AVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 334 ~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
|++++ +++++.+.... ..++.+.+++.++.++|+ .+.+.++.++..+..++.+.+..++++.+......|.++|
T Consensus 223 ~~v~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~ 297 (356)
T PRK08056 223 YLVNSDDAAVARMRRQQ--MPWSINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLF 297 (356)
T ss_pred eeecCCHHHHHHHHHhC--CCCchhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEE
Confidence 99984 67777665432 446677777777777764 3333333333333333333333333433333455688888
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+..+ ...+++.|+++||.+.++..+ .+++||+ ..+.++.+.++++|+++++
T Consensus 298 ~~~~~~----------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 298 LRCERP----------DIDLQRALLTQRILIRSCANYPGLDSRYYRVA---IRSAAENERLLAALRNVLT 354 (356)
T ss_pred EEcCCC----------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---EcCHHHHHHHHHHHHHHHc
Confidence 876321 346788889999999987544 3689999 3478999999999998765
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=1.3e-24 Score=226.17 Aligned_cols=335 Identities=16% Similarity=0.142 Sum_probs=222.1
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc--cc---ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS--TV---LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~--~~---~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA 170 (480)
.+++++|+|.+.... .|+..++.+.+++.+++.+.+.. .. .+..+...+++++|+++++. .+ .++.++|+.+
T Consensus 97 ~~~~~~~n~~s~~YL-gl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-~~-ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLGSYNYL-GFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-PA-AIVFGMGYAT 173 (489)
T ss_pred CCCceEEEeecCCcc-CcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-Cc-EEEECCHHHH
Confidence 457899999876552 24444677888888887775421 12 23478899999999999974 34 4566778888
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
|..++.... .+++.|++.+++|.+...+ .... |.....++. +| .++++++++..
T Consensus 174 n~~~i~al~--~~Gd~Vi~d~~~h~s~~~~-~~~~------------Ga~v~~~~~-------~d----~~~le~~l~~~ 227 (489)
T PLN02483 174 NSTIIPALI--GKGGLIISDSLNHNSIVNG-ARGS------------GATIRVFQH-------NT----PSHLEEVLREQ 227 (489)
T ss_pred HHHHHHHhC--CCCCEEEEcchhhHHHHHH-HHHc------------CCeEEEEeC-------CC----HHHHHHHHHhh
Confidence 887776543 3667788777777664433 2222 222222221 23 24444444311
Q ss_pred ----C-----CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccccccCCC---
Q 011669 251 ----T-----SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVV--- 316 (480)
Q Consensus 251 ----~-----~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~~~~~~~--- 316 (480)
. +.....|++|++.++.|.+.+ +++|.++|++||+++|+||+|+- +|++| .. ..+..++.
T Consensus 228 i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G-~g-~~~~~~v~~~~ 301 (489)
T PLN02483 228 IAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTG-RG-VCELLGVDPAD 301 (489)
T ss_pred hhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCC-Cc-hHHhcCCCccc
Confidence 1 112458889999999998876 99999999999999999999972 34444 21 23344443
Q ss_pred ccee--eeccccccCccccccccCHHHHHhhcCCCccccCC--CcHHHHHHHHHHHHHhhhh-------HHHHHHHHHHH
Q 011669 317 PDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQKD-------KLQNNAHVVGS 385 (480)
Q Consensus 317 pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aaa~a~L~~i~~~-------~~~~~~~~~~~ 385 (480)
.|++ ||||++|+ +.||+++++++++.+.......+++ .+|..++++.++|+.+..+ +..++++++.+
T Consensus 302 ~dI~~~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~ 379 (489)
T PLN02483 302 VDIMMGTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSN 379 (489)
T ss_pred CcEEEEecchhccc--CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHH
Confidence 3555 89999984 2288999999999887654433343 4667777778888876522 34566777777
Q ss_pred HHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCC
Q 011669 386 YLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLC 460 (480)
Q Consensus 386 ~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~ 460 (480)
++++.|+++ .+.... ...+.+.++.+.. ......+.+.|+++||.+.+.+. ..+.+||+++..
T Consensus 380 ~l~~~L~~~--G~~v~~--~~~sp~~~l~l~~--------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~ 447 (489)
T PLN02483 380 FFRSELQKM--GFEVLG--DNDSPVMPIMLYN--------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISAS 447 (489)
T ss_pred HHHHHHHHC--CCcccC--CCCCCEEEEEECC--------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCC
Confidence 788877775 222111 1223455555422 12355788899999999986432 126799999999
Q ss_pred CCHHHHHHHHHHHHHHHhh
Q 011669 461 FTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 461 ~t~~~id~~l~~l~~~l~~ 479 (480)
+|++||++++++|+++++.
T Consensus 448 ~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 448 HSREDLIKALEVISEVGDL 466 (489)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998754
No 132
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=2.8e-25 Score=227.44 Aligned_cols=352 Identities=15% Similarity=0.087 Sum_probs=212.5
Q ss_pred eCCCCEEEeccCCcccc--cCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhC------CCCCCEEEEeC
Q 011669 95 DENGRRYLDAFGGIATV--CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTN 165 (480)
Q Consensus 95 d~dG~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~------~~~~~~v~f~~ 165 (480)
..+|+..|+|..|.+.. .+ -.+|.+.+++.+.+.... ...| +.....+|++.+++++ +.+.++|++|+
T Consensus 28 ~~~~~~~i~l~~G~p~~~~~~-~~p~~~~~a~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~ 104 (409)
T PLN00143 28 EDDHRLAISFGFGDPSCFECF-RTTNIAEDAIVEAVRSAK--FNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTL 104 (409)
T ss_pred cCCCCceeeCCCCCCCCCCCC-CCCHHHHHHHHHHHhCcC--CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence 45678899999887751 12 257888899988776531 1123 2333444555555544 34567899999
Q ss_pred CHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHH
Q 011669 166 SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245 (480)
Q Consensus 166 sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~ 245 (480)
|+++|+..+++.... +++.|++.+++|.++....... |.....++......|..| .+++++
T Consensus 105 G~~~al~~~~~~l~~--~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~ 165 (409)
T PLN00143 105 GCKHAAEIIIKVLAR--PEANILLPRPGFPDVETYAIFH-------------HLEIRHFDLLPEKGWEVD----LDAVEA 165 (409)
T ss_pred ChHHHHHHHHHHHcC--CCCEEEEcCCCCcCHHHHHHHc-------------CCEEEEEeccCCCCCcCC----HHHHHH
Confidence 999999999986543 6789999999998765443322 222222221111123223 567777
Q ss_pred HHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC---CCcceeee
Q 011669 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG---VVPDIVTM 322 (480)
Q Consensus 246 ~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~---~~pDivt~ 322 (480)
+++ .+..+.++++| +|++|.+. +.+.+++|.++|++||+++|+||+|..|...+..+....... ...-+-+|
T Consensus 166 ~~~---~~~~~~~~~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~Sf 240 (409)
T PLN00143 166 IAD---ENTIAMVIINP-GNPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSI 240 (409)
T ss_pred hcc---cCCEEEEEECC-CCCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccc
Confidence 664 23456666776 66777664 888899999999999999999999998865542111111111 12223479
Q ss_pred ccccc-cCccccccccC--HHHH------HhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 011669 323 AKGIG-NGIPLGAVVTT--PEIA------EVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 323 sK~~g-~G~pig~v~~~--~~~~------~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
||.++ .|+|+||++++ +.+. +.+........+ .+.+++.++.++|+.- .+.+.++..+..+..++.+.+
T Consensus 241 SK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 318 (409)
T PLN00143 241 SKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKT-TEDFFSKTINILRAALAFCYD 318 (409)
T ss_pred hhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHH
Confidence 99977 79999999983 3332 222222222223 4678888888777521 122222222222222222222
Q ss_pred hHHhcCcee--eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHH
Q 011669 394 LKDKYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 394 l~~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~ 469 (480)
...+++... .....|+++|+++...... ........+.+.+.++||++.||..| .+++||+. ..++++++++
T Consensus 319 ~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~--~~~~~~l~~a 394 (409)
T PLN00143 319 KLKEIPCIMCPQKAEGAFFALVKLNLLLLE--DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF--AVEQSSLEDG 394 (409)
T ss_pred HHhcCCCCCCCCCCCeeEEEEEecchhhcC--CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE--cCCHHHHHHH
Confidence 222333222 1233478889988421000 00001233345567899999998654 47899994 5679999999
Q ss_pred HHHHHHHHhh
Q 011669 470 VDVMDYSLSK 479 (480)
Q Consensus 470 l~~l~~~l~~ 479 (480)
+++|.+++++
T Consensus 395 l~rl~~~l~~ 404 (409)
T PLN00143 395 LGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 133
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=2.6e-25 Score=226.30 Aligned_cols=336 Identities=14% Similarity=0.111 Sum_probs=210.2
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC----C--CCCC-EEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGse 169 (480)
|..++|+..|.... ..++.+.+++.+.+.... ...|.. ....+|++++++++ + .+.+ .|++|+|+++
T Consensus 30 ~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 30 GVDVISLGIGDPDL---PTPDHIIEAMCKAVEDPE--NHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred CCCEEEecCCCCCC---CCCHHHHHHHHHHHhCCC--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 45578888886553 356889999988776421 122332 22345555555543 3 2334 5888999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
++..+++.... +++.|++.+++|.++...+... |...+.+|......|..| .+++++.+.
T Consensus 105 ~i~~~~~~~~~--~gd~Vl~~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~g~~~d----~~~l~~~~~- 164 (385)
T PRK09276 105 GIAHIPLAFVN--PGDVVLVPDPGYPVYKIGTIFA-------------GGEPYFMPLKEENGFLPD----LDAIPEDVA- 164 (385)
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCCcChHHHHHHc-------------CCEEEEEecCCCCCCcCC----HHHHHHhcc-
Confidence 99999886643 6789999999997765443322 222232222111122223 455655553
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC---cccccc-cCCCcceeeeccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH---FWGFEA-HGVVPDIVTMAKG 325 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~---~~~~~~-~~~~pDivt~sK~ 325 (480)
.++++|++.+.+|++|.+ .+.+.+++|.++|++||+++|+||+|..|...+.. +..++. .+....+.+|||.
T Consensus 165 ---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 240 (385)
T PRK09276 165 ---KKAKLMFINYPNNPTGAV-ADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKT 240 (385)
T ss_pred ---ccceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhh
Confidence 256667776567778876 48888999999999999999999999887544311 111111 2233455689999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
+| .|+|+||+++++++++.+.........+.+++.+.++.++|+. .+.+.+++++..+..++.+.+..++++. ...
T Consensus 241 ~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~ 317 (385)
T PRK09276 241 YNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG--PQEVVEELRKIYQERRDILVEGLRKLGL-EVE 317 (385)
T ss_pred cCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhCCC-ccc
Confidence 98 7999999999999988876543333344566777777777752 2334344333333333434333333332 222
Q ss_pred ec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 405 RG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 405 ~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.+ .|+++|+.+... .....+.+.|+ ++||.+.++..+ .+++||+. ..+++++.+++++|.+
T Consensus 318 ~~~~~~~~~v~~~~~--------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 318 PPKATFYVWAPVPKG--------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TVPDERIEEAVERIKK 384 (385)
T ss_pred CCCcceEEEEECCCC--------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHhh
Confidence 23 356678876321 12456777765 579999987433 36899995 4688899999988864
No 134
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=3.1e-25 Score=220.35 Aligned_cols=324 Identities=19% Similarity=0.232 Sum_probs=230.9
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~-~~~~~v~f~~sGseA~~~Alk~a 178 (480)
..+|+.++... +| .+|++.+++.+.++.+ ..|+.+...++.+++++++. ...+.|+.+||.+|.++..+++.
T Consensus 23 ~~i~LssNenP--~g-p~~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNENP--YG-PPPKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCCC--CC-CCHHHHHHHHHHHHhh----ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 68898888754 44 4589999998888754 56888889999999999998 66789999999999999999987
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
.. +++.|++..++|.-+...+... |...+..|.. . |..| .+.+.+.+. .+....+
T Consensus 96 ~~--~gd~vl~~~Ptf~~Y~~~a~~~-------------g~~~~~v~~~--~-~~~d----~~~~~~~~~---~~~~lv~ 150 (356)
T COG0079 96 VE--PGDTVLIPEPTFSMYEIAAQLA-------------GAEVVKVPLK--E-FRLD----LDAILAAIR---DKTKLVF 150 (356)
T ss_pred hc--CCCEEEEcCCChHHHHHHHHhc-------------CCeEEEeccc--c-cccC----HHHHHHhhh---cCCCEEE
Confidence 65 5689999999996555544433 3332222221 1 3334 344444443 2123455
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cCccccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~pig~ 334 (480)
+++|+|+ +|... +.+.++++.+.|.+ ++++|+||+|..|... .. .....-.++++ ||||++| +|+|+||
T Consensus 151 i~nPNNP-TG~~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~--~~--~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 151 LCNPNNP-TGTLL-PREELRALLEALPE-GGLVVIDEAYIEFSPE--SS--LELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred EeCCCCC-CCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCCc--hh--hhhccCCCCEEEEEecHHhhhcchhceee
Confidence 5556555 55443 66667777777777 9999999999999651 22 12212223343 8999999 8999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+.... ..|+.|.++++++.++|+. .++.+...+....-+++|.+...+++......+.++|+.++
T Consensus 224 ~ia~~~~i~~l~~vr--~p~~v~~~a~~aa~aal~~---~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~ 298 (356)
T COG0079 224 AIANPELIAALNKVR--PPFNVSSPALAAAIAALRD---ADYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVR 298 (356)
T ss_pred ccCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHccc---HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEE
Confidence 999999999988754 7788899999999998863 34555555555555566665555556222456668888887
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.. .. ...+.+.|+++||+++.+.. ..+++||+ .-|+++.+.++++|.++++.
T Consensus 299 ~~~--------~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 299 VPD--------AE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCC--------cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHHHHHhc
Confidence 632 22 45788999999999998743 34699999 66999999999999998764
No 135
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=5.7e-25 Score=225.53 Aligned_cols=353 Identities=13% Similarity=0.042 Sum_probs=223.8
Q ss_pred EEeCCCCEEEeccCCccccc--CCCCCHHHHHHHHHHHHhccccccccCCh-HHHHHHHHHHHhCC------------CC
Q 011669 93 LFDENGRRYLDAFGGIATVC--CGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMP------------GN 157 (480)
Q Consensus 93 l~d~dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~l~e~L~~~~~------------~~ 157 (480)
+.+..|+.+|||..|.+... + ..++.+.+++.+.+.... ...|... ...+|++.|++++. .+
T Consensus 27 ~~~~~~~~~i~l~~g~p~~~~~~-~p~~~~~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~ 103 (412)
T PTZ00433 27 KPSPSPKSIIKLSVGDPTLDGNL-LTPAIQTKALVEAVDSQE--CNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK 103 (412)
T ss_pred ccCCCCCCeeecCCcCCCCcCCC-CCCHHHHHHHHHHhhcCC--CCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCC
Confidence 44578899999999987531 2 257889999988776421 1223322 34556666665542 34
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChH
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE 237 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~ 237 (480)
.++|++|+|+++|+..+++.... +++.|++.+++|..+...+... |+....+|......|+.|
T Consensus 104 ~~~i~it~G~~~al~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d-- 166 (412)
T PTZ00433 104 KDNVVLCSGVSHAILMALTALCD--EGDNILVPAPGFPHYETVCKAY-------------GIEMRFYNCRPEKDWEAD-- 166 (412)
T ss_pred hhhEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCcccHHHHHHHc-------------CCEEEEEecCccccCcCC--
Confidence 67899999999999999987643 6788999999998765443322 222222222111123333
Q ss_pred HHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC-C-
Q 011669 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG-V- 315 (480)
Q Consensus 238 ~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~-~- 315 (480)
.+++++.++. ++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|.+.+..+....... .
T Consensus 167 --~~~l~~~~~~----~~~~i~~~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 239 (412)
T PTZ00433 167 --LDEIRRLVDD----RTKALIMTNPSNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTV 239 (412)
T ss_pred --HHHHHHHhcc----CceEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCC
Confidence 5667666642 456666655577788664 788899999999999999999999998855442111111111 1
Q ss_pred -Ccceeeeccccc-cCcccccccc------CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 011669 316 -VPDIVTMAKGIG-NGIPLGAVVT------TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387 (480)
Q Consensus 316 -~pDivt~sK~~g-~G~pig~v~~------~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l 387 (480)
..-+-+|||.++ .|+|+||+++ .+++++.+.... ..+++.+++.+.++.+.|..- .+.+.++.++..+..
T Consensus 240 ~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~ 317 (412)
T PTZ00433 240 PRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEG 317 (412)
T ss_pred ceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHH
Confidence 112337999996 7999999997 245666554422 234678889888888877531 234444444443344
Q ss_pred HHHHHHhHHhcCceeeEec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC--CCEEEEeCCCCCCH
Q 011669 388 KERLTALKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY--GNVFRITPPLCFTK 463 (480)
Q Consensus 388 ~~~L~~l~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~p~~~~t~ 463 (480)
++.+.+..+++..+..+.. .|+++|+.+...... ......++++.|+ ++||++.++..| .+++||+. ...+
T Consensus 318 r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~--~~~~ 392 (412)
T PTZ00433 318 AMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFR---DIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI--SRPV 392 (412)
T ss_pred HHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcC---CCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEe--cCCH
Confidence 4444444433322322333 477888887421000 0001356777776 579999998655 47899995 4568
Q ss_pred HHHHHHHHHHHHHHhh
Q 011669 464 EDADYLVDVMDYSLSK 479 (480)
Q Consensus 464 ~~id~~l~~l~~~l~~ 479 (480)
+++++++++|.++++.
T Consensus 393 e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 393 EVLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 136
>PRK08068 transaminase; Reviewed
Probab=99.95 E-value=2.9e-25 Score=226.18 Aligned_cols=338 Identities=12% Similarity=0.030 Sum_probs=210.0
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----C--CCCC-EEEEeCCHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGs 168 (480)
.|..+|||..|.+.. +.+|.+.+++.+.+.... ...|. .....+|++++++++ + .+.+ +|++|+|++
T Consensus 30 ~~~~~i~l~~~~p~~---~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~ 104 (389)
T PRK08068 30 EGHDVINLGQGNPDQ---PTPEHIVEALQEAAENPA--NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGK 104 (389)
T ss_pred cCCCeEEecCCCCCC---CCCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcH
Confidence 344678988876543 567899999988776421 12232 333455666666554 3 3445 799999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+++..++..... +++.|++.+++|..+...+... |+..+.+|......|..| .+++++.+.
T Consensus 105 ~~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~~ 165 (389)
T PRK08068 105 AGLVELPQCLMN--PGDTILVPDPGYPDYLSGVALA-------------RAQFETMPLIAENNFLPD----YTKIPEEVA 165 (389)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhc-------------CCEEEEeecccccCCCCC----HHHHHHhcc
Confidence 999988775433 6788999999997665443322 333333332111123223 456666553
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccC---CCcceeeecc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHG---VVPDIVTMAK 324 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~---~~pDivt~sK 324 (480)
.++++|++...+|++|.+ .+.+.+++|.++|++||+++|+||+|..|...+..... ....+ ....+.+|||
T Consensus 166 ----~~~~~v~l~~P~NPTG~~-~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK 240 (389)
T PRK08068 166 ----EKAKLMYLNYPNNPTGAV-ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSK 240 (389)
T ss_pred ----ccceEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchh
Confidence 245555555346777776 58889999999999999999999999887655411111 12222 2233448999
Q ss_pred ccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 325 ~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
.+| .|+|+||+++++++++.+.........+.++..+.++.++|. +.+.+.+..++..+..++.+.+...++++ ..
T Consensus 241 ~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~ 317 (389)
T PRK08068 241 TFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALL--SDQSCVAELVARYESRRNAFISACREIGW-EV 317 (389)
T ss_pred ccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHCCC-cc
Confidence 998 899999999999999887654333334444556666666663 12233333333323333333333333342 22
Q ss_pred Eecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 404 VRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 404 v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.++. |+++|+.+... .....+.+.|++ +||++.++..+ .+++||+. ..+++.+.+++++|.++
T Consensus 318 ~~~~g~~~~~v~~~~~--------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 318 DAPKGSFFAWMPVPKG--------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LTDEERLREAVERIGKL 386 (389)
T ss_pred cCCCeeEEEEEECCCC--------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEE--cCCHHHHHHHHHHHHHh
Confidence 3344 45678877321 124668888876 69999987432 36899995 46788888888888763
No 137
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=2.4e-25 Score=223.28 Aligned_cols=318 Identities=17% Similarity=0.200 Sum_probs=212.8
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
.+.|||..|... ++ .+|++++|+.+++... ..|..+...++++.++++++.+.+++++++|+++++..+++..
T Consensus 19 ~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNENP--FG-PPPKAKEALRAEADKL----HRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCCC--CC-CCHHHHHHHHHhHHHh----hcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh
Confidence 479999988764 33 5799999999877543 2234444578999999999766678999999999998888765
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
. .+++.|++.+++|..+...... .|+....+|... .+..| .+++++.+. +++++|
T Consensus 92 ~--~~gd~v~~~~p~y~~~~~~~~~-------------~g~~~~~~~~~~--~~~~d----~~~l~~~~~----~~~~~v 146 (346)
T TIGR01141 92 L--EPGDAVLVPPPTYSMYEISAKI-------------HGAEVVKVPLDE--DGQLD----LEDILVAID----DKPKLV 146 (346)
T ss_pred c--CCCCEEEEcCCCHHHHHHHHHH-------------cCCeEEEeccCC--CCCCC----HHHHHHhcC----CCCCEE
Confidence 3 3568899999988543322111 133333332211 12223 566666543 357777
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHh--CCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cCccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKA--GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPL 332 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~--gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~pi 332 (480)
+++..++++|.+.+ ++++.++|+.+ |+++|+||+|.+|...+ ... ......++++ ++||.++ +|+|+
T Consensus 147 ~l~~p~NptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~ 219 (346)
T TIGR01141 147 FLCSPNNPTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEP-STL--PLLAEYPNLIVLRTLSKAFGLAGLRI 219 (346)
T ss_pred EEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCc-cHH--HHHhhCCCEEEEehhhHhhhchhhhc
Confidence 77777888898875 55666666655 99999999999775432 221 1111223433 7899997 69999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeE
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 411 (480)
||+++++++.+.+.... .+++.+++++.++.+.++... -+...++++++.+++++.|+ +++.+......|.++
T Consensus 220 G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~~~g~~~ 293 (346)
T TIGR01141 220 GYAIANAEIIDALNKVR--APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLK----KLPGLEVYPSDANFV 293 (346)
T ss_pred eeeecCHHHHHHHHhcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH----hcCCCEECCCcCCEE
Confidence 99999999988877543 356778888888888775432 12233344444444444443 333333344467888
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC---CCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY---GNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
++++.. ...++.+.|.++||.+.++..+ .+++|+++. +++++++++++|+
T Consensus 294 ~~~~~~----------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 294 LIRFPR----------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred EEecCC----------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 887632 1467888899999999987654 578999943 8999999998873
No 138
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=4.2e-25 Score=224.54 Aligned_cols=337 Identities=14% Similarity=0.074 Sum_probs=211.9
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC----C--CCCC-EEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGse 169 (480)
|..++||..|... ++ .++.+.+++.+.+.... ...|.. ....+|++.+++++ + .+.+ +|++|+|+++
T Consensus 28 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 28 GVDVISLGIGDPD--LP-TPKHIVEALCKAAENPE--NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred CCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 5577888888654 33 36889999988775421 122332 22344555555443 2 2334 6889999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
++..+++.... +++.|++.+++|.++....... |...+++|......|..| .+++++.+.
T Consensus 103 ~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~-------------G~~v~~v~~~~~~g~~~d----~~~l~~~~~- 162 (383)
T TIGR03540 103 GIAHIPLAFVN--PGDIVLVPDPGYPVYRIGTLFA-------------GGEPYEMPLKEENGFLPD----FDAIPEDIA- 162 (383)
T ss_pred HHHHHHHHhCC--CCCEEEEeCCCCcchHHHHHhc-------------CCEEEEEecCcccCCccC----HHHHHhhcc-
Confidence 99999886543 6788999999998765543332 233333332111122222 456666553
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccc-cCCCcceeeeccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEA-HGVVPDIVTMAKG 325 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~-~~~~pDivt~sK~ 325 (480)
+++++|++...+|++|.+ ++.+.+++|.++|++||+++|+||+|..+...+..... .+. .+....+.+|||.
T Consensus 163 ---~~~~~v~i~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 238 (383)
T TIGR03540 163 ---KKAKLMFINYPNNPTGAV-APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKT 238 (383)
T ss_pred ---ccceEEEEeCCCCCcCcc-CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccc
Confidence 256667666557788876 48889999999999999999999999877544311111 111 1223445689999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
+| .|+|+||+++++++++.+.........+.+.+.+.++.++|+.. +++.+.+++..+..++.+.+..+++++....
T Consensus 239 ~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 316 (383)
T TIGR03540 239 YNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKIGIDVEK 316 (383)
T ss_pred cCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEecC
Confidence 98 79999999999999887765433334455667777777777531 3444433333333344444444444422222
Q ss_pred eccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 405 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
...|+++|+.+... .....+++.|+ ++||.+.++..+ .+++||+. ..+++++.+++++|.+
T Consensus 317 ~~~~~~~~~~l~~~--------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 317 PKATFYVWVPVPEG--------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TVPDERLEEAVARIKK 382 (383)
T ss_pred CCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cCCHHHHHHHHHHHhh
Confidence 23466678887321 12456777764 689999987433 35899995 4678899999888864
No 139
>PRK09148 aminotransferase; Validated
Probab=99.94 E-value=3.1e-25 Score=226.90 Aligned_cols=345 Identities=14% Similarity=0.075 Sum_probs=218.1
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC----C--CCCC-EEEEeCCHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGT 168 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGs 168 (480)
.|+.+|||..|.+.. + .++.+.+++.+.+... ....|.. ....+|++.+++.+ + .+.+ +|++|+|++
T Consensus 28 ~~~~~i~l~~~~p~~--~-~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~ 102 (405)
T PRK09148 28 AGADIIDLGMGNPDL--P-TPQHIVDKLCETAQDP--RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSK 102 (405)
T ss_pred cCCCeEEcCCCCCCC--C-CCHHHHHHHHHHHcCc--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChH
Confidence 467789998776543 3 3678888887766431 1122332 22345555555443 3 2345 799999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+++..+++.... +++.|++.+++|.++....... |+...++|......| .+++++.++
T Consensus 103 ~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~-------~~~l~~~~~ 160 (405)
T PRK09148 103 EGFANMAQAITA--PGDVILCPNPSYPIHAFGFIMA-------------GGVIRSVPAEPDEEF-------FPALERAVR 160 (405)
T ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcccHHHHHhc-------------CCEEEEEeCCCCCCC-------ccCHHHHHh
Confidence 999999886643 6788999999998765443322 333333332111111 234555554
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc----CCCcceeeecc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH----GVVPDIVTMAK 324 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~----~~~pDivt~sK 324 (480)
...+ ++.++++...+|++|.+. +.+.+++|.++|++||+++|+||+|..|...+......... +....+.+|||
T Consensus 161 ~~~~-~~~~v~l~~P~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK 238 (405)
T PRK09148 161 HSIP-KPIALIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSK 238 (405)
T ss_pred hccc-cceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccc
Confidence 3323 455555555567777664 88889999999999999999999999875443111111111 22223458999
Q ss_pred ccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 325 ~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
.++ .|+|+||+++++++++.+.......+++.+++++.++.+.|+. .+++.++.++..+..++.+.+..++++....
T Consensus 239 ~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 316 (405)
T PRK09148 239 TFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG--PQDCIAEMRELYKKRRDVLVESFGRAGWDIP 316 (405)
T ss_pred ccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 999 8999999999999998887654445667788888888887752 2334444433333333444333333443222
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
....|+++|+++..... .....++.+.|+ ++||.+.++..| .+++||+. ..+++++.+++++|.+++.
T Consensus 317 ~p~~g~f~~~~l~~~~~-----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~--~~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 317 PPAASMFAWAPIPEAFR-----HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL--VENEQRIRQAARNIKRFLS 389 (405)
T ss_pred CCCeeEEEEEECCCccC-----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 24457788888742110 001345666655 789999997543 36899995 4689999999999998875
Q ss_pred h
Q 011669 479 K 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 390 ~ 390 (405)
T PRK09148 390 S 390 (405)
T ss_pred H
Confidence 4
No 140
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=1e-24 Score=218.85 Aligned_cols=328 Identities=20% Similarity=0.206 Sum_probs=219.6
Q ss_pred CEEEeccCCcccccCCCC-CHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHC-HPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANE 172 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~ 172 (480)
+.||.|+++. .|||. ||+|++|+++.+++..+... ....+...++++.|+++++. +.++++++|++++.
T Consensus 1 ~~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~iv~~sg~~a~~ 75 (349)
T cd06454 1 KKVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK--EAALVFSSGYAAND 75 (349)
T ss_pred CCceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC--CCEEEeccHHHHHH
Confidence 4688887654 57998 99999999999987533111 23467788999999999965 34678899999999
Q ss_pred HHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC-
Q 011669 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT- 251 (480)
Q Consensus 173 ~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~- 251 (480)
.+++.+.. +++.|++.++.| .......... |+....++. .| .++++++++...
T Consensus 76 ~~~~~~~~--~gd~Vl~~~~~~-~~~~~~~~~~------------g~~~~~~~~-------~~----~~~le~~i~~~~~ 129 (349)
T cd06454 76 GVLSTLAG--KGDLIISDSLNH-ASIIDGIRLS------------GAKKRIFKH-------ND----MEDLEKLLREARR 129 (349)
T ss_pred HHHHHhcC--CCCEEEEehhhh-HHHHHHHHHc------------CCceEEecC-------CC----HHHHHHHHHHhhc
Confidence 88876542 566777766654 3322222111 222222221 12 356777776421
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC--Cccc-ccccCCCccee--eecccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS--HFWG-FEAHGVVPDIV--TMAKGI 326 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~--~~~~-~~~~~~~pDiv--t~sK~~ 326 (480)
+.++++|+++++++++|.+.+ +++|.++|++||+++|+||+|. +|..+. .... ........|++ +++|.+
T Consensus 130 ~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 204 (349)
T cd06454 130 PYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAF 204 (349)
T ss_pred cCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcEEEeechhhh
Confidence 246789999999999998765 9999999999999999999996 333221 1110 11111234554 789999
Q ss_pred ccCccccccccCHHHHHhhcCCCc--cccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 327 GNGIPLGAVVTTPEIAEVLTRRNY--FNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 327 g~G~pig~v~~~~~~~~~l~~~~~--~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
+. +.|+++.++++++.+..... ..+...++..++++.++|+.+.+ ++..+++.++.+++++.|.++ ......
T Consensus 205 ~~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~- 279 (349)
T cd06454 205 GA--VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL--GFPVGG- 279 (349)
T ss_pred cc--cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--CCcccC-
Confidence 85 44889999998877654322 22335678888888999987765 566777888888888877764 222211
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.+.+.+.++.+ . ......++.+.|+++||.+.+++. .++++||+++...+++++++++++|+++
T Consensus 280 -~~~~~~~~~~~-~-------~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 280 -SPSHIIPPLIG-D-------DPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -CCCCcEEEEeC-C-------ChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 11222222221 1 112356788899999999976432 1468999999889999999999999864
No 141
>PLN02656 tyrosine transaminase
Probab=99.94 E-value=4.8e-25 Score=225.77 Aligned_cols=352 Identities=18% Similarity=0.116 Sum_probs=217.7
Q ss_pred CCCCEEEeccCCcccccC-CCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhC----C--CCCCEEEEeCCH
Q 011669 96 ENGRRYLDAFGGIATVCC-GHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM----P--GNLKVVFFTNSG 167 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~----~--~~~~~v~f~~sG 167 (480)
..|+.+++|..|.+.... -..++.+.+++.+.+.... ...| +.....++++++++++ + .+.++|++|+|+
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 105 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNK--FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGC 105 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCCh
Confidence 367889999988876321 2467899999988776521 1123 2334455555555554 2 345789999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++|+..++.... .+++.|++.+++|..+....... |+....+|......|..| .+++++.+
T Consensus 106 ~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~i~~~~~~~~~~d----~~~l~~~~ 166 (409)
T PLN02656 106 TQAIDVALSMLA--RPGANILLPRPGFPIYELCAAFR-------------HLEVRYVDLLPEKGWEVD----LDAVEALA 166 (409)
T ss_pred HHHHHHHHHHHh--CCCCeEEEeCCCCCcHHHHHHHc-------------CCEEEEEeCCCcCCCCCC----HHHHHHHh
Confidence 999999998654 36788999999996543322211 222222221111122223 56677766
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc---cccCCCcceeeecc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF---EAHGVVPDIVTMAK 324 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~---~~~~~~pDivt~sK 324 (480)
+ ++..+++++.| +|++|.+ .+++.+++|.++|++||+++|+||+|.+|.+.+.....+ +......-+-+|||
T Consensus 167 ~---~~~~~v~l~~P-~NPtG~~-~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK 241 (409)
T PLN02656 167 D---QNTVALVIINP-GNPCGNV-YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSK 241 (409)
T ss_pred c---cCceEEEEECC-CCCCCCC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccch
Confidence 4 22445555665 6677766 478889999999999999999999999886555211111 11112223447999
Q ss_pred ccc-cCccccccccC--------HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhH
Q 011669 325 GIG-NGIPLGAVVTT--------PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 325 ~~g-~G~pig~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~ 395 (480)
.++ .|+|+||++++ +++++.+..... ...+.+.+++.++.++|+.. .+.+.++.++..+..++.+.+..
T Consensus 242 ~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~L 319 (409)
T PLN02656 242 RWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFD-ILGGPATFIQAAVPTILEQT-DESFFKKTINILKQSSDICCDRI 319 (409)
T ss_pred hccCcceeEEEEEEeCcccccccHHHHHHHHHHHh-hhcCCCHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 977 79999999984 567776654322 12356788899888888631 12333333333333334444433
Q ss_pred HhcCcee-eEec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHH
Q 011669 396 DKYGIIG-DVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 396 ~~~~~~~-~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+.++... ..++ .|+++|+++...... ........+.+.|.++||++.||..| .+++||+.. .++++++++++
T Consensus 320 ~~~~~~~~~~~p~gg~~~w~~l~~~~~~--~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~ 395 (409)
T PLN02656 320 KEIPCITCPHKPEGSMAVMVKLNLSLLE--DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALG 395 (409)
T ss_pred hhCCCCcCCcCCCeEEEEEEecchhhcC--CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHH
Confidence 3443222 1233 467788887321000 00011234556778899999998554 368999954 58999999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|++++.+
T Consensus 396 rl~~~~~~ 403 (409)
T PLN02656 396 RIKSFYLR 403 (409)
T ss_pred HHHHHHHH
Confidence 99998763
No 142
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=4.2e-25 Score=224.50 Aligned_cols=336 Identities=11% Similarity=0.076 Sum_probs=214.4
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcc--ccccccCChHHHHHHHHHHHhCCCC--C-CEEEEeCCHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMPGN--L-KVVFFTNSGTEANELA 174 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~l~e~L~~~~~~~--~-~~v~f~~sGseA~~~A 174 (480)
.+|||..|.+. ++ .++.+.+++.+.+.... +....+..+...++++.+++.++.+ . ++|++|+||++|+..+
T Consensus 30 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGAPN--FA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCCCC--CC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 46888887764 33 47889999888665421 1111223355566777766666543 2 4799999999999999
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
++... .+++.|++.+++|.+........ |...+.+|... ..|..| .+.+++.++ ++
T Consensus 107 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~-~~~~~d----~~~l~~~l~----~~ 162 (384)
T PRK12414 107 ISALV--HPGDEVIYFEPSFDSYAPIVRLQ-------------GATPVAIKLSP-EDFRVN----WDEVAAAIT----PR 162 (384)
T ss_pred HHHhc--CCCCEEEEeCCCccchHHHHHHc-------------CCEEEEEecCc-cccccC----HHHHHhhcC----cc
Confidence 88653 36789999999997654433322 22222222111 112223 566776664 25
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc-ccCC---Ccceeeeccccc-cC
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE-AHGV---VPDIVTMAKGIG-NG 329 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~-~~~~---~pDivt~sK~~g-~G 329 (480)
+++|++...+|++|.+. +++.+++|.++|++||+++|+||+|..|...+.....+. ..+. ..-+.+|||.+| .|
T Consensus 163 ~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 241 (384)
T PRK12414 163 TRMIIVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG 241 (384)
T ss_pred cEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence 66777766778888764 788899999999999999999999988755442111111 1111 222347999998 89
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec-c
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG-R 407 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g-~ 407 (480)
+|+||+++++++++.+.......+++.+.+++.++.+.|+.-. .....+.+++..+.+.+.|++ ++ +...++ .
T Consensus 242 lRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g-~~~~~~~g 316 (384)
T PRK12414 242 WRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SR-FELLPSEG 316 (384)
T ss_pred ceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CC-CeecCCCc
Confidence 9999999999998888765555677888889988887775211 012233344444444444433 33 222333 4
Q ss_pred ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY------GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 408 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~------~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
|+++|+++.... .......+.+.|.++||.+.|+..| .+++||+.. .+++++++++++|.+
T Consensus 317 g~~~~~~~~~~~-----~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 317 SFFMLARFRHFS-----DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred ceEEEEcccccC-----CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 566777763210 0011233445677899999997533 368999954 589999999999864
No 143
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.2e-25 Score=224.59 Aligned_cols=352 Identities=13% Similarity=0.100 Sum_probs=220.1
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc--ccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANEL 173 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGseA~~~ 173 (480)
|..++|+..|.+.. ..+|.+.+++.+.+.... +....+..+...++++.+.+.++. ..++|++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPDF---DTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCCC---CCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 44578888887654 247889999998876432 122223335556666777666543 45689999999999999
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
+++.. ..+++.|++.+++|.++........+ ..+.++......|..| .+++++.++ +
T Consensus 109 ~~~~~--~~~gd~vl~~~p~y~~y~~~~~~~~~-------------~~~~v~~~~~~~~~~~----~~~l~~~~~---~- 165 (402)
T PRK06107 109 ALMAT--LEAGDEVIIPAPYWVSYPDMVLANDG-------------TPVIVACPEEQGFKLT----PEALEAAIT---P- 165 (402)
T ss_pred HHHHh--cCCCCEEEEecCCCcCHHHHHHHcCC-------------EEEEecCCcccCCCCC----HHHHHhhcC---c-
Confidence 98754 23678899999988776543332211 1111111111122223 466776664 2
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh-CCEEEEcccccCccccCCCcccccc--cCCCcc---eeeeccccc
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWGFEA--HGVVPD---IVTMAKGIG 327 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~tgfgr~G~~~~~~~~--~~~~pD---ivt~sK~~g 327 (480)
+++++++...+|++|.+ ++.+.+++|.++|++| |+++|+||+|..+...+..+..+.. .+.... +-+|||.++
T Consensus 166 ~~~~v~l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 244 (402)
T PRK06107 166 RTRWLILNAPSNPTGAV-YSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYA 244 (402)
T ss_pred CceEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhc
Confidence 45555555446777765 4888899999999998 9999999999877554421111111 111122 336799998
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe-
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR- 405 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~- 405 (480)
.|+|+||+++++++++.+.......+++.+.+.++++..+|+. .+.+.++.++.-+..++.+.+..++++.+....
T Consensus 245 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 245 MTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred CcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 8999999999999998887755556677889999998888852 233333333332333333333333333333233
Q ss_pred ccceeEEEEEecCCCcCCCCHH---HHHHHHH-HHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKA---ETLYIMD-KMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~---~~~~~~~-~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..|+++|+.+..-.....|... ....+++ .+.++||.+.+|..| .+++||+. ..+++++++++++|.+.+++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--ATSLETLEEACARIERAVAA 400 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHh
Confidence 3466778876311000001110 1234554 456789999998665 36899995 46899999999999999876
Q ss_pred C
Q 011669 480 M 480 (480)
Q Consensus 480 ~ 480 (480)
+
T Consensus 401 ~ 401 (402)
T PRK06107 401 L 401 (402)
T ss_pred c
Confidence 4
No 144
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=5.7e-25 Score=221.84 Aligned_cols=324 Identities=14% Similarity=0.130 Sum_probs=216.0
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEE-eCCHHHHHHHH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFF-TNSGTEANELA 174 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f-~~sGseA~~~A 174 (480)
.+++.++||..|... +| .+|.+.+++.+.+... ..|+.+...++++.++++++.+.+++++ +++.++++..+
T Consensus 31 ~~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~----~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 31 IDPESIIKLGSNENP--LG-PSPKAVEAIEKELSKI----HRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CCccceEEccCCCCC--CC-CCHHHHHHHHHHHHhh----cCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 456789999877643 45 5789999998877653 2344444588999999999776778888 67778888888
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
++... .+++.|++.+++|..+....... |+....++.. ..|..| .+++++.++ .+
T Consensus 104 ~~~~~--~~gd~vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~--~~~~~~----~~~l~~~~~----~~ 158 (361)
T PRK00950 104 MRTFI--DPGDEVIIPTPTFSYYEISAKAH-------------GAKPVYAKRE--EDFSLD----VDSVLNAIT----EK 158 (361)
T ss_pred HHHhc--CCCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecC--CCCCcC----HHHHHHHhc----cC
Confidence 87653 35678999999886644332211 2323322211 122223 566776664 24
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccCCCcceeeeccccc-cCccc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDIVTMAKGIG-NGIPL 332 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~~~pDivt~sK~~g-~G~pi 332 (480)
++++++..+++++|.+.+ .+++.++|+++|+++|+||+|.+|. .+ ..... ...+....+.+|||.+| .|+|+
T Consensus 159 ~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~-~~~~~~~~~~~vi~~~S~SK~~g~~GlRi 232 (361)
T PRK00950 159 TKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EY-DYTPLALEYDNLIIGRTFSKVFGLAGLRI 232 (361)
T ss_pred CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-cc-chHHHHHhcCCEEEEEeehHhhcCchhhc
Confidence 556666566788888877 7889999999999999999998874 22 22111 11222223448999999 79999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
||+++++++++.+.... ..++.++++++++.++|+ +.++.++..+..+..++.|.+. +. +......|.++|
T Consensus 233 G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~---l~-~~~~~~~~~~i~ 303 (361)
T PRK00950 233 GYGFVPEWLIDYYMRAK--TPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNE---LP-FKVYPSEANFVL 303 (361)
T ss_pred chhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhh---cC-eeECCCcceEEE
Confidence 99999999988776533 345577888888877775 3344444444434444444332 22 222344577888
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+ .. ....++++.|.++||++.++..+ .+++||++. +.+++++++++|+++++
T Consensus 304 ~~~-~~--------~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 304 VDV-TP--------MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIVE 361 (361)
T ss_pred EEC-CC--------CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHhC
Confidence 877 21 01467888899999999886433 358999943 78899999999998763
No 145
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=1.2e-24 Score=219.93 Aligned_cols=321 Identities=17% Similarity=0.181 Sum_probs=212.0
Q ss_pred EEEeccCCcccccCCC-CCHHHHHHHHHHHHhc--------ccccc----ccCChHHHHHHHHHHHhCCCCCCEEEEeCC
Q 011669 100 RYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRI--------QHSTV----LYLNHAIADFAEALASKMPGNLKVVFFTNS 166 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~--------~~~~~----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~s 166 (480)
+++||.++.+ ||+ .||.+.+++.+++.+. .|... ...++...+++++|+++++. +.+++.+|
T Consensus 5 ~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~--~~~l~~~s 79 (370)
T PRK05937 5 LSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA--PEAFIVPS 79 (370)
T ss_pred ceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CeEEEECC
Confidence 4555554432 333 4799999998888775 22222 12467889999999999975 45688899
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 167 GTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 167 GseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
|+.||...+.. ..+++++|+.+..+|+.....+..... .. +.++. +| .++++++
T Consensus 80 G~~a~~~~~~~---~~~~~d~ii~d~~~H~sv~~~~~~~~~--~~----------~~~~~-------~d----~~~l~~~ 133 (370)
T PRK05937 80 GYMANLGLCAH---LSSVTDYVLWDEQVHISVVYSLSVISG--WH----------QSFRH-------ND----LDHLESL 133 (370)
T ss_pred hHHHHHHHHHH---hCCCCCEEEEEhhhhHHHHHHHHHcCC--ce----------EEecC-------CC----HHHHHHH
Confidence 99998643332 235678999999999988887655321 10 11111 23 5678888
Q ss_pred HHccC--CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-C-ccccCCCcccc--cccCCCccee
Q 011669 247 IDFGT--SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-G-FARTGSHFWGF--EAHGVVPDIV 320 (480)
Q Consensus 247 i~~~~--~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-g-fgr~G~~~~~~--~~~~~~pDiv 320 (480)
++... .+++.+|+++++++++|.+.| +++|.++|+++|+++|+||+|+ | ++.+| ..+.. ...+..+|+.
T Consensus 134 l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~~ 208 (370)
T PRK05937 134 LESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVLV 208 (370)
T ss_pred HHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEEE
Confidence 76421 134667889999999999988 9999999999999999999997 3 45555 21111 1112346788
Q ss_pred eecccccc-CccccccccCHHHHHhhcC--CCccccCCCcHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHhH
Q 011669 321 TMAKGIGN-GIPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKD--KLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 321 t~sK~~g~-G~pig~v~~~~~~~~~l~~--~~~~~t~~~~~~~~aaa~a~L~~i~~~--~~~~~~~~~~~~l~~~L~~l~ 395 (480)
||||.+|+ | +.++..+++.+.+.. .....+.+.++.+++++.++++.+.++ ...++++++.+++++.|...
T Consensus 209 tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~- 284 (370)
T PRK05937 209 TYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA- 284 (370)
T ss_pred echhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-
Confidence 99999984 5 335565665554431 223344557788888888899887643 34455555566655544321
Q ss_pred HhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 396 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+.+....+.+.. .....+.+.|.++||.+.... ...+.+||+++..+|++|||.+++.|+
T Consensus 285 ----------~~~~~~~i~~~~---------~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~ 345 (370)
T PRK05937 285 ----------APGCVQPIFLPG---------ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLA 345 (370)
T ss_pred ----------CCCCEEEEEeCC---------hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 111122233311 123567888999999887421 224689999999999999999999999
Q ss_pred HHHhh
Q 011669 475 YSLSK 479 (480)
Q Consensus 475 ~~l~~ 479 (480)
+++++
T Consensus 346 ~~~~~ 350 (370)
T PRK05937 346 TYLEK 350 (370)
T ss_pred HHHHH
Confidence 98764
No 146
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=3.8e-25 Score=225.01 Aligned_cols=339 Identities=14% Similarity=0.099 Sum_probs=216.2
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc--cccccCChHHHHHHHHHHHhCCCC--C-CEEEEeCCHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLYLNHAIADFAEALASKMPGN--L-KVVFFTNSGTEANEL 173 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~l~e~L~~~~~~~--~-~~v~f~~sGseA~~~ 173 (480)
+.++||..|.... ..+|.+.+++.+.+..... ....+..+...++++.+.+.++.. . +++++|+|+++|+..
T Consensus 30 ~~~i~l~~g~~~~---~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGFPDF---DGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCCCCC---CCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 3578998887654 3478899999887764321 111223345566677766665432 2 369999999999999
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
+++.... +++.|++.+++|.+........ |...+.++... ..|..| .+++++.++ +
T Consensus 107 ~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~~~----~ 162 (386)
T PRK09082 107 AILALVR--PGDEVIVFDPSYDSYAPAIELA-------------GGRAVRVALQP-PDFRVD----WQRFAAAIS----P 162 (386)
T ss_pred HHHHHcC--CCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecCc-ccccCC----HHHHHHhcC----c
Confidence 9986543 6788999999887654433222 22333332211 112233 566776664 2
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccCC---Ccceeeeccccc-c
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGV---VPDIVTMAKGIG-N 328 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~~---~pDivt~sK~~g-~ 328 (480)
++++|++...+|++|.+. +++.+++|.++|++||+++|+||+|..+...+.....+ ...+. ..-+.+|||.+| .
T Consensus 163 ~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 163 RTRLIILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred cceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch
Confidence 566777766678888764 77889999999999999999999998775443111111 11122 222337999998 7
Q ss_pred CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccc
Q 011669 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRG 408 (480)
Q Consensus 329 G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g 408 (480)
|+|+||+++++++++.+........++.+.+++.++.+.|+. .+.+.+++++.-+..++.+.+..+++++.......|
T Consensus 242 G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~ 319 (386)
T PRK09082 242 GWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA--EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGT 319 (386)
T ss_pred hhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCee
Confidence 999999999999998887655556677888888877766642 233333333332333333333333333222223346
Q ss_pred eeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 409 FLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY------GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 409 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~------~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
+++|+++.+-. .....++++.| .++||.+.|+..| .+++||+. ..+++++++++++|.+
T Consensus 320 ~~~~~~~~~~~------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAIS------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccC------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cCCHHHHHHHHHHHhh
Confidence 67888874210 01245677765 6789999987543 26899995 4589999999999875
No 147
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.8e-25 Score=223.33 Aligned_cols=335 Identities=13% Similarity=0.076 Sum_probs=209.5
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC----C--CCCC-EEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM----P--GNLK-VVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGse 169 (480)
|..++||..|.+.. ..++++.+++.+.+.... ...|.. ....+|++++++++ + .+.+ .+++|+|+++
T Consensus 34 g~~~i~l~~g~p~~---~~p~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 34 GLDLIDLGMGNPDG---AAPQPVIEAAIAALADPQ--NHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred CCCeEEcCCCCCCC---CCCHHHHHHHHHHHhCCC--CccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 55678998775432 346678888877665321 112332 22344555555443 3 2345 5889999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+..++.... .+++.|++.+++|.+........ |...+.+|......|..| .+++++.++
T Consensus 109 al~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~~~- 168 (394)
T PRK05942 109 GLTHLALAYV--NPGDVVLVPSPAYPAHFRGPLIA-------------GAQIYPIILKPENDWLID----LSSIPEEVA- 168 (394)
T ss_pred HHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCEEEEeecCCccCCccC----HHHHHHhcc-
Confidence 9999987653 36789999999997755443221 333333332212223333 566766664
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccc-cCCCcceeeeccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEA-HGVVPDIVTMAKG 325 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~-~~~~pDivt~sK~ 325 (480)
.+++++++...+|++|.+ .+++.+++|.++|++||+++|+||+|..|...+....+ +.. .+....+.+|||.
T Consensus 169 ---~~~k~i~l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 244 (394)
T PRK05942 169 ---QQAKILYFNYPSNPTTAT-APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKT 244 (394)
T ss_pred ---ccceEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhc
Confidence 256777766557788876 48888999999999999999999999877554421111 111 1233445689999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCcee
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 402 (480)
++ +|+|+||+++++++++.+........++.+.+++.++.++|+..++ +...+++++..+++.+.|+ .+++ .
T Consensus 245 ~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~-~ 319 (394)
T PRK05942 245 YNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLG----ELGW-N 319 (394)
T ss_pred cCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH----HCCC-e
Confidence 97 7999999999999998887644444566777888888888863211 1223333444444444443 3332 2
Q ss_pred eEec-cceeEEEEEecCCCcCCCCHHHHHHHHH-HHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 403 DVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMD-KMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 403 ~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
...+ .|+++|+.+.... ...++.. .+.++||.+.++..| .+++||+.+ .+.+.+.+++++|.++
T Consensus 320 ~~~~~~~~f~~~~~~~~~--------~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 320 IPPTKATMYLWVPCPVGM--------GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQA 389 (394)
T ss_pred ecCCCeeeEEEEECCCCC--------CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 2233 4557888873210 1233444 456789999887543 369999964 4567777777777653
No 148
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=4.2e-25 Score=232.48 Aligned_cols=346 Identities=14% Similarity=0.118 Sum_probs=217.2
Q ss_pred CCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhC------CCCCCEEEEeCCH
Q 011669 96 ENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKM------PGNLKVVFFTNSG 167 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~------~~~~~~v~f~~sG 167 (480)
..|+.+|+|..|... .+|. .++++.+++.+.+.... .|.. ....+|++.|++++ ..+.++|++++|+
T Consensus 143 ~~g~~~i~l~~G~p~-~~~~~~p~~~~~~~~~~~~~~~----~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~ 217 (517)
T PRK13355 143 AAGTHILKLNIGNPA-PFGFRTPDEVVYDMAQQLTDTE----GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGV 217 (517)
T ss_pred HcCCCeEEecCcCCC-cCCCCCCHHHHHHHHHHhhcCC----CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcH
Confidence 468889999988764 3443 46789999988775431 2332 34666777777665 3456789999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
+|++..+++... .+++.|++.+++|..+...+... |...+.++......|..| .+++++.+
T Consensus 218 ~eal~~~~~~l~--~~Gd~Vli~~P~y~~y~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~ 278 (517)
T PRK13355 218 SELINLSMSALL--DDGDEVLIPSPDYPLWTACVNLA-------------GGTAVHYRCDEQSEWYPD----IDDIRSKI 278 (517)
T ss_pred HHHHHHHHHHhC--CCCCEEEEcCCCCcCHHHHHHHC-------------CCEEEEeecCcccCCCCC----HHHHHHhc
Confidence 999999998654 36789999999998766544333 222222222112234334 56777766
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcce-----eee
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI-----VTM 322 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDi-----vt~ 322 (480)
+ + +++++++...+|++|.+. +++.+++|.++|++||+++|+||+|..|.+.|.....+.. ..+|. -+|
T Consensus 279 ~---~-~~k~i~i~nP~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~--~~~~~~vi~~~S~ 351 (517)
T PRK13355 279 T---S-RTKAIVIINPNNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS--LAPDLFCVTFSGL 351 (517)
T ss_pred C---c-CceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH--hCCCCeEEEEecc
Confidence 4 2 455554444467777764 7899999999999999999999999988655421111111 12332 368
Q ss_pred ccccc-cCccccccccC--HHH----HHhhcCCCccccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHh
Q 011669 323 AKGIG-NGIPLGAVVTT--PEI----AEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 323 sK~~g-~G~pig~v~~~--~~~----~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l 394 (480)
||.++ .|||+||++++ +++ ++.+... ....++.|.+++.++.++|+.... +++.+..++..+. ++.+.+.
T Consensus 352 SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~-r~~l~~~ 429 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQ-RELVYNA 429 (517)
T ss_pred hhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHH-HHHHHHH
Confidence 99997 79999999954 443 3333211 123356778888888888852110 1222222222221 3333333
Q ss_pred HHhcCceeeEecccee-EEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHH
Q 011669 395 KDKYGIIGDVRGRGFL-LGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 395 ~~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~ 469 (480)
.++++.+....+.|.| +|+.+..... +.......+.+.|.++||++.+|..| .+++||+ ++.++++++++
T Consensus 430 L~~~~g~~~~~p~g~fy~~~~l~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~~~~~l~~a 504 (517)
T PRK13355 430 LNAIPGISAVKPKAAFYIFPKIDVKKF---NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLPRLEDLEDA 504 (517)
T ss_pred HhcCCCcccCCCCeeeEEEeecCcccC---CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCCCHHHHHHH
Confidence 3444434445555555 4556532100 00011334556678899999998554 3689999 56899999999
Q ss_pred HHHHHHHHhh
Q 011669 470 VDVMDYSLSK 479 (480)
Q Consensus 470 l~~l~~~l~~ 479 (480)
+++|.++++.
T Consensus 505 ~~rl~~~~~~ 514 (517)
T PRK13355 505 MDRLADFFSY 514 (517)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 149
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=9e-25 Score=221.49 Aligned_cols=326 Identities=15% Similarity=0.120 Sum_probs=214.3
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
.+..+|||..|.... ..+|.+.+++.+ .... ..|+.+...+|+++|+++++.+.++|++++|+++++..+++
T Consensus 50 ~~~~~i~l~~n~~p~---~~~~~v~~a~~~-~~~~----~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 50 KPEDIVKLDANENPY---GPPPEVLEALGN-MKFP----YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMR 121 (380)
T ss_pred CccceEEccCCCCCC---CCCHHHHHHHHh-hHhh----ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHH
Confidence 356889988876543 467889888764 2211 23555567889999999998777889999999999999887
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
.... +++.|++.+++|..+...+... |...+.+|.. ..|..| .+++++.++. .+++
T Consensus 122 ~~~~--~gd~Vlv~~P~y~~y~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~~~~---~~~~ 177 (380)
T PLN03026 122 CVLD--PGDKIIDCPPTFGMYVFDAAVN-------------GAEVIKVPRT--PDFSLD----VPRIVEAVET---HKPK 177 (380)
T ss_pred HhcC--CCCEEEEcCCChHHHHHHHHHc-------------CCEEEEeecC--CCCCcC----HHHHHHHHhc---cCCc
Confidence 6532 6678999999996544322211 3333333321 123333 5677776632 2567
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcceeeeccccc-cCccccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLGA 334 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig~ 334 (480)
+|++.+.+|++|.+.+ .+++.++++.. +++|+||+|..|...+ .... .+..+...-+-||||.+| +|+|+||
T Consensus 178 ~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~-~~~~~~~~~~~viv~~SfSK~~glaGlRiGy 251 (380)
T PLN03026 178 LLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQE-SRMKWVKKYDNLIVLRTFSKRAGLAGLRVGY 251 (380)
T ss_pred EEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCc-chHHHHHhCCCEEEEecchHhhcCcccccee
Confidence 7777777888888875 66667777654 9999999999885433 2211 111122222348999999 8999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+.... ..++.+.+++.++.++|+. .++.++.++.....++.+.+..++++.+......|+++++.
T Consensus 252 ~~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~aL~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~ 326 (380)
T PLN03026 252 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALSN---PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCR 326 (380)
T ss_pred eecCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEE
Confidence 999999988876543 2466788888888888852 23333333332333333433333444333345567888887
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
+... ....++.+.|.++||.+.++.. ..+++||+.. +.++++.++++|++.
T Consensus 327 ~~~~--------~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 327 VTSG--------RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCC--------CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 6321 1145688888899999988642 2468999933 778899999988764
No 150
>PRK05839 hypothetical protein; Provisional
Probab=99.94 E-value=6e-25 Score=222.45 Aligned_cols=332 Identities=12% Similarity=0.028 Sum_probs=212.6
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-ccccccCChHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~l~e~L~~~~~--~~~~~v~f~~sGseA~~~ 173 (480)
.|+.++||..|.+.. + .++.+.+++.+...... +....+..+....+++.+.+.++ .+.++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~~p~~--~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGEPQF--E-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCCCCC--C-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 388999999887653 4 35788888877654321 11112223445556666666544 456889999999999988
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
++++...-.+++.|++..++|.++....... |+..+++|....+.|..| ..+. .+ +
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-------------g~~v~~v~~~~~~~~~~d----~~~~--~~-----~ 154 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-------------RAKVLLMPLTKENDFTPS----LNEK--EL-----Q 154 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHHHHhc-------------CCEEEEeecccccCCcCC----cchh--hh-----c
Confidence 8775432235678999999998766554322 344444443222223322 1111 12 1
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-c--------ccCCCcceeeecc
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-E--------AHGVVPDIVTMAK 324 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~--------~~~~~pDivt~sK 324 (480)
+++++++...+|++|.+. +++.+++|.++|++||+++|+||+|..|...+ ....+ . .++...-+.+|||
T Consensus 155 ~~k~v~i~nP~NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 155 EVDLVILNSPNNPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred cccEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEecccc
Confidence 455666656677777764 88899999999999999999999999874322 22111 1 0112222447999
Q ss_pred ccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 325 GIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 325 ~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
.++ +|+|+||+++++++++.+........++.+.+.+.++.+++. ++++.++.++..+..++.+.+ .++..
T Consensus 233 ~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~---~l~~~-- 304 (374)
T PRK05839 233 RSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLARE---ILGIT-- 304 (374)
T ss_pred ccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHH---hcCCC--
Confidence 987 799999999999998877654333445667777777776663 233433333333333333332 22222
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY------GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~------~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
....|+++|+.+.. ..++++.|+ ++||.+.++..+ .+++||+. ..+++++.+++++|.++
T Consensus 305 ~p~gg~fi~~~~~~-----------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~ 371 (374)
T PRK05839 305 IPPATFYVWLPVDN-----------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTY 371 (374)
T ss_pred CCCeeEEEEEeCCC-----------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHH
Confidence 44568888988731 245777776 599999987432 37999995 46899999999999988
Q ss_pred Hh
Q 011669 477 LS 478 (480)
Q Consensus 477 l~ 478 (480)
++
T Consensus 372 l~ 373 (374)
T PRK05839 372 LE 373 (374)
T ss_pred hh
Confidence 75
No 151
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.94 E-value=5.6e-25 Score=227.03 Aligned_cols=345 Identities=17% Similarity=0.192 Sum_probs=241.0
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc-ccccC-ChHHHHHHHHHHHhC------CCCCCEEEEeCCH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS-TVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSG 167 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~~~~~-~~~~~~l~e~L~~~~------~~~~~~v~f~~sG 167 (480)
.+....+||..|.....+ .....+.+++.+.+...... ...|. .....+|++.+++++ ....++|++|+|.
T Consensus 86 ~~~~~~i~f~~g~p~~~~-fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPSL-FPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred cCCCceecCCCCCCCccc-CCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 455788999888754422 23456666666655433211 11122 234444444444443 3456799999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
.+|+++.+++... +++.|++-+++|++........ |+..+++|....+ -| .+.|++.+
T Consensus 165 q~al~l~~~~l~~--pGd~v~vE~PtY~~~~~~~~~~-------------g~~~~~vp~d~~G---~~----~e~le~~~ 222 (459)
T COG1167 165 QQALDLLLRLLLD--PGDTVLVEDPTYPGALQALEAL-------------GARVIPVPVDEDG---ID----PEALEEAL 222 (459)
T ss_pred HHHHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHc-------------CCcEEecCCCCCC---CC----HHHHHHHH
Confidence 9999998887655 7889999999999866544333 4444544442111 12 68888888
Q ss_pred HccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCc---ccccccCCCcceeeec
Q 011669 248 DFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF---WGFEAHGVVPDIVTMA 323 (480)
Q Consensus 248 ~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~---~~~~~~~~~pDivt~s 323 (480)
+.. +++++++.| .||++|.+. +.+--++|.++|++||+++|.|++|..|..++... .+.+..+.+.-+.|||
T Consensus 223 ~~~---~~k~~y~~P~~qNPtG~tm-s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFS 298 (459)
T COG1167 223 AQW---KPKAVYVTPTFQNPTGVTM-SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFS 298 (459)
T ss_pred hhc---CCcEEEECCCCCCCCCCcc-CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeeh
Confidence 743 788999999 788889875 78888999999999999999999999997765322 3344445566677999
Q ss_pred cccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---HHHHhHHhc-C
Q 011669 324 KGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE---RLTALKDKY-G 399 (480)
Q Consensus 324 K~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~---~L~~l~~~~-~ 399 (480)
|.++.|+|+||+++++++++.+....+..+.+.+.+.+.+...-|. +..+.++++++++.+++ .+.+..+++ +
T Consensus 299 K~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~ 375 (459)
T COG1167 299 KTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLP 375 (459)
T ss_pred hhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999998887778888899998887766654 33344444444444433 343434444 3
Q ss_pred -ce-eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeec-cCc------CCCEEEEeCCCCCCHHHHHHHH
Q 011669 400 -II-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGK-GGF------YGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 400 -~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~-~~~------~~~~iRi~p~~~~t~~~id~~l 470 (480)
.. ......|+++|+++... .....+.+.++++||.+.+ +.. ..+.+||+++. .+++++++++
T Consensus 376 ~~~~~~~p~gG~flwl~l~~~--------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi 446 (459)
T COG1167 376 ELATWTRPEGGLFLWLELPEG--------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGI 446 (459)
T ss_pred CCeeeecCCceEEEEEEcCCC--------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHH
Confidence 22 23344489999998442 3367789999999999998 422 23589999874 5689999999
Q ss_pred HHHHHHHhh
Q 011669 471 DVMDYSLSK 479 (480)
Q Consensus 471 ~~l~~~l~~ 479 (480)
.+|.+++++
T Consensus 447 ~~l~~~~~~ 455 (459)
T COG1167 447 KRLAALLRE 455 (459)
T ss_pred HHHHHHHHH
Confidence 999988864
No 152
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=1.5e-24 Score=220.87 Aligned_cols=337 Identities=15% Similarity=0.146 Sum_probs=212.5
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHH----hCCC--CCC-EEEEeCCHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALAS----KMPG--NLK-VVFFTNSGTEAN 171 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~----~~~~--~~~-~v~f~~sGseA~ 171 (480)
.++||..|.+... .++.+.+++.+.+.... ..|. .....+|++.+++ .++. +.+ +|++|+||++|+
T Consensus 25 ~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 98 (387)
T PRK07777 25 GAVNLGQGFPDED---GPPEMLEAAQEAIAGGV---NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI 98 (387)
T ss_pred CeEEccCCCCCCC---CCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 5689988887652 35778888777665421 2232 2334555555554 3432 233 699999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcC-CCCCCChHHHHHHHHHHHHcc
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le~~i~~~ 250 (480)
.+++.... .+++.|++..++|++........ |...+.++.... ..|..| .+++++.+.
T Consensus 99 ~~~~~~~~--~~gd~vli~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~d----~~~l~~~~~-- 157 (387)
T PRK07777 99 AAAVLGLV--EPGDEVLLIEPYYDSYAAVIAMA-------------GAHRVPVPLVPDGRGFALD----LDALRAAVT-- 157 (387)
T ss_pred HHHHHHhc--CCCCEEEEeCCCchhhHHHHHHC-------------CCEEEEeecCCccCCCcCC----HHHHHHhcC--
Confidence 99887543 36788999999998765332222 222222221111 122223 566776664
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-C---CCcceeeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-G---VVPDIVTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~---~~pDivt~sK~~ 326 (480)
+++++|++.+.+|++|.+. +.+.+++|.++|++||+++|+||+|.++...+.....+... + ...-+.+|||.+
T Consensus 158 --~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 234 (387)
T PRK07777 158 --PRTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTF 234 (387)
T ss_pred --cccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhc
Confidence 2567777777788888875 78889999999999999999999999876544222122211 1 222244799999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
| .|+|+||+++++++++.+.......+++.+++.+.++..+++..++ +...+.+++..+.+.+.|++ +++...
T Consensus 235 g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~ 310 (387)
T PRK07777 235 NVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE----AGFEVH 310 (387)
T ss_pred cCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCcc
Confidence 9 7999999999999888776654445666666666666666642111 12334444445555554444 332111
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC-------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY-------GNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~-------~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
....|+++|+++..... .....+++.|+ ++||.+.|+..| .+++||+. ..+++++++++++|.+
T Consensus 311 ~~~g~~~~~~~~~~~~~------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~~~l~~l~~ 382 (387)
T PRK07777 311 DSAGTYFLCADPRPLGY------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLDEAIRRLRA 382 (387)
T ss_pred CCCcceEEEecccccCC------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence 22235667777632110 02456788886 679999987533 35899995 4589999999999998
Q ss_pred HHh
Q 011669 476 SLS 478 (480)
Q Consensus 476 ~l~ 478 (480)
+..
T Consensus 383 ~~~ 385 (387)
T PRK07777 383 LRG 385 (387)
T ss_pred Hhc
Confidence 754
No 153
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=1.9e-24 Score=222.24 Aligned_cols=349 Identities=16% Similarity=0.105 Sum_probs=212.1
Q ss_pred CCEEEeccCCcccccCC-CCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----C--CCCCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCG-HCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~--~~~~~v~f~~sGse 169 (480)
|+.+|++..|.+...-. -.+|++.+++.+.+..... ..|. .....++++.+++++ + .+.++|++|+|+++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~ 128 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKY--NSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcC--CCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence 78899998887654111 1357899999988765311 1232 234455666666554 2 24578999999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+..+++... .+++.|++.+++|..+...+..... .+..++.+ ....|.-| .++++++++
T Consensus 129 al~l~~~~l~--~~Gd~Vlv~~P~y~~y~~~~~~~g~-----------~~~~~~~~--~~~~~~~d----~~~l~~~~~- 188 (430)
T PLN00145 129 AIEIIMSVLA--QPGANILLPRPGYPLYEARAVFSGL-----------EVRHFDLL--PERGWEVD----LEGVEALAD- 188 (430)
T ss_pred HHHHHHHHhc--CCCCEEEEcCCCCccHHHHHHHcCC-----------EEEEeeCC--cccCCcCC----HHHHHHHhC-
Confidence 9999998654 3678899999999875543332211 12222211 11123334 567777765
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC---CCcceeeecccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG---VVPDIVTMAKGI 326 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~---~~pDivt~sK~~ 326 (480)
++..++++++| +|++|.+ .+.+.+++|.++|++||+++|+||+|..|.+.+..+......+ ...-+-+|||.+
T Consensus 189 --~~~~~i~i~~P-~NPtG~v-~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 264 (430)
T PLN00145 189 --ENTVAMVIINP-NNPCGSV-YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRW 264 (430)
T ss_pred --cCceEEEEeCC-CCCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccccc
Confidence 22445566666 6777765 5888899999999999999999999998765442211111111 122234799997
Q ss_pred c-cCcccccccc--CHHHHH------hhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHh
Q 011669 327 G-NGIPLGAVVT--TPEIAE------VLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDK 397 (480)
Q Consensus 327 g-~G~pig~v~~--~~~~~~------~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~ 397 (480)
+ .|||+||+++ ++++++ .+.... ....+.+.+.+.++..+|+.- .+++.++..+..+..++.+.+..++
T Consensus 265 ~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~ 342 (430)
T PLN00145 265 VVPGWRLGWIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANT-KEEFFTKTLGLLKETADICYEKIKE 342 (430)
T ss_pred CCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7 7999999997 444432 222211 122245678888888877631 1333333333333333333333344
Q ss_pred cCceee--EeccceeEEEEEecCCCcCCCCHHHHHHHH-HHHHHcCceeeccCcCC--CEEEEeCCCCCCHHHHHHHHHH
Q 011669 398 YGIIGD--VRGRGFLLGVEFVTDRQLKTPAKAETLYIM-DKMKEMGVLVGKGGFYG--NVFRITPPLCFTKEDADYLVDV 472 (480)
Q Consensus 398 ~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~~~~--~~iRi~p~~~~t~~~id~~l~~ 472 (480)
++.+.. .+..|+++|+.+..... +.......++ +.+.++||++.||..++ +++||+. ..+++++++++++
T Consensus 343 ~~g~~~~~~P~ga~y~~v~l~~~~~---~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~--~~~~~~l~~al~r 417 (430)
T PLN00145 343 IKCITCPHKPEGSMFVMVKLDLSCL---SGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF--AIDPPSLEDGLER 417 (430)
T ss_pred CCCCCCCcCCCeeeEEEeccChhhc---CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHH
Confidence 443332 24456677777632100 0000123445 45567899999986554 7999995 4689999999999
Q ss_pred HHHHHhh
Q 011669 473 MDYSLSK 479 (480)
Q Consensus 473 l~~~l~~ 479 (480)
|.+++.+
T Consensus 418 l~~~~~~ 424 (430)
T PLN00145 418 LKSFCLR 424 (430)
T ss_pred HHHHHHH
Confidence 9998864
No 154
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.2e-24 Score=222.03 Aligned_cols=339 Identities=13% Similarity=0.044 Sum_probs=211.4
Q ss_pred eCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-ccccccCChHHHHHHHHHHHhCC----CCC-CEEEEeCCHH
Q 011669 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVLYLNHAIADFAEALASKMP----GNL-KVVFFTNSGT 168 (480)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~l~e~L~~~~~----~~~-~~v~f~~sGs 168 (480)
+..|+.++||..|.+.. ..++.+.+++.+.+.... +....+..+....+++.+.+.++ .+. ++|++|+|++
T Consensus 24 ~~~~~~~i~l~~~~p~~---~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 24 PPASKPPIALSIGEPKH---PTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred hhcCCCeEEecCCCCCC---CCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 45678889998887654 357889999988765321 11112222334445555544422 244 3799999999
Q ss_pred HHHHHHHHHHHhhcCCc--eEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCN--DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~--~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
+|+..++++... +++ .|++.+++|.++...+... |+..+.+|....+.|..| .+++++.
T Consensus 101 ~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~d----~~~l~~~ 161 (393)
T TIGR03538 101 EALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLA-------------GAEPYFLNCTAENGFLPD----FDAVPES 161 (393)
T ss_pred HHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhc-------------CCeEEEeeccccCCCCCC----HHHHHHH
Confidence 999999987654 344 4888899997655433221 233333332111223333 4566666
Q ss_pred HHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC-Cccc----ccccC-----CC
Q 011669 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWG----FEAHG-----VV 316 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~-~~~~----~~~~~-----~~ 316 (480)
+.. +++++++...+|++|.+. +.+.+++|.++|++||+++|+||+|..+...+. .... ....+ ..
T Consensus 162 ~~~----~~k~i~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 236 (393)
T TIGR03538 162 VWR----RCQLLFVCSPGNPTGAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236 (393)
T ss_pred Hhh----cceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccE
Confidence 542 456666656677888764 888999999999999999999999988754321 1111 11111 11
Q ss_pred cceeeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhH
Q 011669 317 PDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 317 pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~ 395 (480)
.-+-+|||.++ .|+|+||+++++++++.+.......+++.+++.+.++.+.+. .+++.++.++..+..++.+.+..
T Consensus 237 i~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L 313 (393)
T TIGR03538 237 LVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWN---DEQHVRENRALYREKFAAVLEIL 313 (393)
T ss_pred EEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHHH
Confidence 22347999987 799999999999998877654433456678888888877764 23333333222222222222222
Q ss_pred HhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----------CCEEEEeCCCCCCHH
Q 011669 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----------GNVFRITPPLCFTKE 464 (480)
Q Consensus 396 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----------~~~iRi~p~~~~t~~ 464 (480)
.++ ........|+++|+++.. ....+.+.|+ ++||.+.||..| .+++||+ ++.+++
T Consensus 314 ~~~-~~~~~p~gg~f~~~~~~~----------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris--~~~~~~ 380 (393)
T TIGR03538 314 GQV-LDLELPDAGFYLWPKVPG----------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIA--LVAPLE 380 (393)
T ss_pred Hhh-CcccCCCeeEEEEEECCC----------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEE--ecCCHH
Confidence 222 111234568888998731 1345777765 689999888643 2689999 456899
Q ss_pred HHHHHHHHHHHH
Q 011669 465 DADYLVDVMDYS 476 (480)
Q Consensus 465 ~id~~l~~l~~~ 476 (480)
++++++++|.+.
T Consensus 381 ~l~~~l~~l~~~ 392 (393)
T TIGR03538 381 ECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
No 155
>PRK07683 aminotransferase A; Validated
Probab=99.94 E-value=2.8e-24 Score=218.65 Aligned_cols=338 Identities=12% Similarity=0.088 Sum_probs=210.3
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhC----C--CCCC-EEEEeCCHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM----P--GNLK-VVFFTNSGTEA 170 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~----~--~~~~-~v~f~~sGseA 170 (480)
..++||..|.+.. ..++.+.+++.+.+.... ..| +.....+|++.+++++ + .+.+ +|++|+|+++|
T Consensus 28 ~~~i~l~~~~p~~---~~~~~~~~a~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~a 101 (387)
T PRK07683 28 DNLISLTIGQPDF---PTPSHVKEAAKRAITENY---TSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEA 101 (387)
T ss_pred CCeEEecCCCCCC---CCCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 4678888876542 246789999998876431 112 1233344444444443 2 2455 79999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..+++.... .++.|++.+++|.++....... |+..+.++... ..|..| .+++++.++.
T Consensus 102 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~~----~~~l~~~~~~- 160 (387)
T PRK07683 102 IDIAFRTILE--PGTEVILPAPIYPGYEPIIRLC-------------GAKPVFIDTRS-TGFRLT----AEALENAITE- 160 (387)
T ss_pred HHHHHHHhCC--CCCEEEEcCCCccchHHHHHHc-------------CCEEEEeecCc-ccCCCC----HHHHHHhcCc-
Confidence 9999886543 6788999999998765554332 22222222211 112222 4567666642
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-CC---Ccceeeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GV---VPDIVTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~~---~pDivt~sK~~ 326 (480)
+++++++...+|++|.+ .+++.+++|.++|+++|+++|+||+|..+...+ .......+ +. ..-+.+|||.+
T Consensus 161 ---~~~~i~i~~p~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~ 235 (387)
T PRK07683 161 ---KTRCVVLPYPSNPTGVT-LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-PHTSIAHFPEMREKTIVINGLSKSH 235 (387)
T ss_pred ---CceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEecccccceeCC-CcCChhhccCCcCCeEEEeeccccc
Confidence 45666666667778876 488889999999999999999999999875433 21111111 21 22234799999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
| .|+|+||+++++++++.+.........+.+.+++.++.+.|+. .+...++.++.-+..++.+.+...+.+......
T Consensus 236 ~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 313 (387)
T PRK07683 236 SMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTA--GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP 313 (387)
T ss_pred cCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 9 8999999999999888876543333345567788888777752 122233333222223333333333333222223
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHH-HHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMD-KMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..|+++|+.+.... .....+.. .+.++||.+.++..| .+++||+. ..+++++.+++++|.+++.+
T Consensus 314 ~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~--~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 314 TGAFYLFPSIGHFT-------MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSY--AYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeeEEEEEecccCC-------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHh
Confidence 34556666653211 01234544 457789999987543 47899994 56899999999999998753
No 156
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=1.4e-24 Score=219.12 Aligned_cols=323 Identities=15% Similarity=0.086 Sum_probs=206.6
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC---CCCCEEEEeCCHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFFTNSGTEANELA 174 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~---~~~~~v~f~~sGseA~~~A 174 (480)
+..++||..|.+.. ..+|.+.+++.+......+....+.......+++.+.+..+ .+.++|++|+|+++++..+
T Consensus 26 ~~~~i~l~~~~p~~---~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~ 102 (364)
T PRK07865 26 PDGIVDLSVGTPVD---PVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWL 102 (364)
T ss_pred CCCEEEcCCCCCCC---CCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHH
Confidence 34578888776432 34688889887655432222222223445556666655433 4467999999999999987
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
+.++. ..+++.|++.+++|.+........ |...+.+++ .++++ ..+
T Consensus 103 ~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~-------------~~~l~-------~~~ 148 (364)
T PRK07865 103 PTLLG-LGPGDVVVIPELAYPTYEVGARLA-------------GATVVRADS-------------LTELG-------PQR 148 (364)
T ss_pred HHHHc-CCCCCEEEECCCCcccHHHHHHhc-------------CCEEEecCC-------------hhhCC-------ccc
Confidence 66542 136788999999997664443222 333333221 12221 135
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccc------cCCCcceeeeccccc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEA------HGVVPDIVTMAKGIG 327 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~------~~~~pDivt~sK~~g 327 (480)
+++|++++.+|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ .... +.. .+...-+.+|||.++
T Consensus 149 ~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 226 (364)
T PRK07865 149 PALIWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDA-EPVSILDPRVCGGDHTGLLAVHSLSKQSN 226 (364)
T ss_pred ceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCC-CCCccccccccCCccceEEEEeechhccC
Confidence 67777777788888775 77889999999999999999999999886554 2211 111 011122347999997
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 406 (480)
.|+|+||+++++++++.+........++.+++.+.++.++|+ ++++.++.++..+..++.+.+...+++.......
T Consensus 227 ~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 303 (364)
T PRK07865 227 LAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALG---DDAHVREQRERYARRRAVLRPALEAAGFRVDHSE 303 (364)
T ss_pred CCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 799999999999998887654444556678888888777764 2333333333333334444444334442212223
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
.|+++|+.+.. ....+.+.|.++||++.++..+ .+++||+.. .+++++++++++|.
T Consensus 304 ~~~~~~~~~~~----------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 304 AGLYLWATRGE----------DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred ccEEEEEeCCC----------CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 35667776521 1345678889999999887433 368999954 57999999999885
No 157
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.94 E-value=3.6e-24 Score=218.18 Aligned_cols=341 Identities=13% Similarity=0.102 Sum_probs=218.1
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----CC--C-CCEEEEeCCHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----PG--N-LKVVFFTNSGTEA 170 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~~--~-~~~v~f~~sGseA 170 (480)
+.+|||..|.... + .++.+.+++.+.+.... ..|. .....+|++.+++++ +. . .++|++|+|+++|
T Consensus 30 ~~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~a 103 (391)
T PRK07309 30 PGILKLTLGEPDF--T-TPDHVKEAAKRAIDANQ---SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEA 103 (391)
T ss_pred CCeEEcCCCCCCC--C-CCHHHHHHHHHHHhcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence 4589998888753 4 36788888887765421 1122 223455555555543 22 1 3579999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..+++... .+++.|++.+++|.++....... |...+.++... ..|..| .+++++.++..
T Consensus 104 l~~~~~~~~--~~gd~vl~~~p~y~~~~~~~~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~~~~~ 163 (391)
T PRK07309 104 LSASLTAIL--EPGDKVLLPAPAYPGYEPIVNLV-------------GAEIVEIDTTE-NDFVLT----PEMLEKAILEQ 163 (391)
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCcchHHHHHHc-------------CCEEEEEecCC-cCCcCC----HHHHHHHhhcc
Confidence 999988653 36788999999998865433221 22222222211 112223 56777777542
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccc--cCCCcceeeeccccc-
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA--HGVVPDIVTMAKGIG- 327 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~--~~~~pDivt~sK~~g- 327 (480)
.++++++++...+|++|.+ .+.+.+++|.++|++||+++|+||+|..|...|........ .+...-+.+|||.+|
T Consensus 164 -~~~~~~i~l~~P~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 241 (391)
T PRK07309 164 -GDKLKAVILNYPANPTGVT-YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAM 241 (391)
T ss_pred -CCCeEEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccC
Confidence 2357777777557778866 47788999999999999999999999987654422212111 111222347999998
Q ss_pred cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
.|+|+||+++++++++.+.......+.+.+++++.++.+.|+.... ....+++++..+++.+.|++ ++......
T Consensus 242 ~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p 317 (391)
T PRK07309 242 TGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKP 317 (391)
T ss_pred ccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCC
Confidence 8999999999999988877543344556788888888887763211 12233444444445444443 33222223
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHHH-HHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..|+++|+.+.... ......+.+. +.++||++.++..+ +++|||+.+ .+.+++++++++|.+++++
T Consensus 318 ~gg~~~~~~l~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 318 DGAFYIFAKIPAGY------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEE 388 (391)
T ss_pred CeeEEEEEECCCCC------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 34666777663210 0013456654 56789999987543 468999954 5789999999999998865
No 158
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=219.09 Aligned_cols=340 Identities=15% Similarity=0.127 Sum_probs=218.9
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCCCC---CCEEEEeCCHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMPGN---LKVVFFTNSGTEANEL 173 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~~~---~~~v~f~~sGseA~~~ 173 (480)
.++|+..|... +. .++.+.+|+.+.+.... +....+..+....+++.+++.++.. .+++++++|+++++..
T Consensus 28 ~~~~l~~g~~~--~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVVS--YP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 36777777655 22 56889999988765432 2122233456677888888776642 5679999999999998
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
++.... .+++.|++.+++|......... .|+..+.+|.. ..|+.| .+++++.++ .
T Consensus 105 ~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~-------------~g~~~~~v~~~--~~~~~d----~~~l~~~i~----~ 159 (389)
T PRK05957 105 AILAIT--DPGDEIILNTPYYFNHEMAITM-------------AGCQPILVPTD--DNYQLQ----PEAIEQAIT----P 159 (389)
T ss_pred HHHHhc--CCCCEEEEeCCCCcCHHHHHHh-------------cCCEEEEeecC--CCCCcC----HHHHHHhcC----c
Confidence 887653 3678899999998654332211 13333333321 122223 567777764 2
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-cc---ccCCCcceeeeccccc-c
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FE---AHGVVPDIVTMAKGIG-N 328 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~---~~~~~pDivt~sK~~g-~ 328 (480)
++++|++...+|++|.+. +++.+++|.++|++||+++|+||+|.+|...+..... .. .......+.+|||.+| .
T Consensus 160 ~~klv~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 238 (389)
T PRK05957 160 KTRAIVTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFA 238 (389)
T ss_pred CceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCc
Confidence 566767766788888775 7788999999999999999999999988554311111 11 1112233558999998 8
Q ss_pred CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCce-eeE-ec
Q 011669 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGII-GDV-RG 406 (480)
Q Consensus 329 G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v-~g 406 (480)
|+|+||+++++++++.+.........+.+.+++.++..+|+. .+++.++..+..+..++.+.+..++++.+ ... ..
T Consensus 239 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 316 (389)
T PRK05957 239 SWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV--GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPAN 316 (389)
T ss_pred cceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC
Confidence 999999999999998887644334455667788888777752 12232222222233333333333333322 212 23
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.|+++|+++... ....++++.|. ++||.+.+|..+ ++++||+.+. .+++++++++++|.+.++.
T Consensus 317 gg~~~~~~~~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 317 GAFYCFLKVNTD--------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred eeEEEEEeCCCC--------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 367788887321 12456777775 689999997543 3589999643 5789999999999988764
No 159
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=2.1e-24 Score=220.51 Aligned_cols=345 Identities=13% Similarity=0.023 Sum_probs=215.3
Q ss_pred CCCEEEeccCCcccc-cCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----C--CCCCEEEEeCCHH
Q 011669 97 NGRRYLDAFGGIATV-CCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLKVVFFTNSGT 168 (480)
Q Consensus 97 dG~~ylD~~~g~~~~-~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~--~~~~~v~f~~sGs 168 (480)
+|..+||+..|.+.. .++ .++.+.+++.+.+.... ..|. .....+|++++++++ + .+.++|++|+|++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGH---NYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 467899999998742 444 57899999988775421 1232 344566666666654 2 3557899999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+|+..++.... .+++.|++.+++|.+....+... |...+.++......|..| .+++++.+.
T Consensus 104 ~al~~~~~~~~--~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~~ 164 (398)
T PRK08363 104 EALQLIFGALL--DPGDEILIPGPSYPPYTGLVKFY-------------GGVPVEYRTIEEEGWQPD----IDDIRKKIT 164 (398)
T ss_pred HHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCEEEEeccccccCCcCC----HHHHHhhCC
Confidence 99999998663 36788999999998765543322 222222211101112223 456666664
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC---CCcceeeeccc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG---VVPDIVTMAKG 325 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~---~~pDivt~sK~ 325 (480)
.+++++++...+|++|.+. +.+.+++|.++|++||+++|+||+|..+...+ ......... ...-+.+|||.
T Consensus 165 ----~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 165 ----EKTKAIAVINPNNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred ----cceEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccCHHHcCcCCcEEEEecchhc
Confidence 2456666655677788764 78889999999999999999999998775444 221111111 11223489999
Q ss_pred cc-cCcccccccc--CHHHHHhhcCCC---ccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 326 IG-NGIPLGAVVT--TPEIAEVLTRRN---YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 326 ~g-~G~pig~v~~--~~~~~~~l~~~~---~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
++ +|+|+||+++ ++++++.+.... ...+++.+.+++.++.++|+. .+++.++.++.....++.+.+..++++
T Consensus 239 ~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~ 316 (398)
T PRK08363 239 YFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLNEIP 316 (398)
T ss_pred cCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 76 7999999997 666655543221 113467788888888888752 233333333333333333333333343
Q ss_pred ceeeEecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 400 IIGDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 400 ~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
.+....+. |+++|+.+..... . .....+.+.|.++||.+.++..| .+++||+. ..+++++++++++|.
T Consensus 317 ~~~~~~p~g~~~~~~~l~~~~~---~--~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~ 389 (398)
T PRK08363 317 GISTTKPQGAFYIFPRIEEGPW---K--DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILEEAMDRFE 389 (398)
T ss_pred CCEecCCCeEEEEEEEeccCCC---C--CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHH
Confidence 33333344 4455656632100 0 11233456678899999987544 36899994 578999999999999
Q ss_pred HHHhh
Q 011669 475 YSLSK 479 (480)
Q Consensus 475 ~~l~~ 479 (480)
+++++
T Consensus 390 ~~~~~ 394 (398)
T PRK08363 390 EFMRE 394 (398)
T ss_pred HHHHH
Confidence 88764
No 160
>PRK08912 hypothetical protein; Provisional
Probab=99.94 E-value=1.9e-24 Score=220.09 Aligned_cols=339 Identities=16% Similarity=0.124 Sum_probs=212.7
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHh----CC--CCCC-EEEEeCCHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASK----MP--GNLK-VVFFTNSGTEAN 171 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~----~~--~~~~-~v~f~~sGseA~ 171 (480)
..+||..|.+.. + .++.+.+++.+.+.... ..|.. ....+|++.++++ ++ .+.+ +|++|+|+++|+
T Consensus 27 ~~i~l~~g~p~~--~-~p~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 27 GAINLGQGFPDD--P-GPEDVRRAAADALLDGS---NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CeEEccCCCCCC--C-CCHHHHHHHHHHHhcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 468998888764 3 36888888887765421 12332 2234455555543 32 3455 899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
..++..... +++.|++.+++|.++...+... |+..+.+|.. ...|+.| .+++++.+.
T Consensus 101 ~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~-~~~~~~~----~~~l~~~~~--- 157 (387)
T PRK08912 101 AAALLALVE--PGDEVVLFQPLYDAYLPLIRRA-------------GGVPRLVRLE-PPHWRLP----RAALAAAFS--- 157 (387)
T ss_pred HHHHHHhcC--CCCEEEEeCCCchhhHHHHHHc-------------CCEEEEEecC-cccCcCC----HHHHHHHhC---
Confidence 988876533 6788999999997655433222 2222222211 1112223 566777664
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccC---CCcceeeeccccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHG---VVPDIVTMAKGIG 327 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~---~~pDivt~sK~~g 327 (480)
.+++++++...+|++|.+. +.+.+++|.++|++||+++|+||+|..|...+.....+ ...+ ...-+.+|||.+|
T Consensus 158 -~~~~~v~l~~p~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 235 (387)
T PRK08912 158 -PRTKAVLLNNPLNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS 235 (387)
T ss_pred -ccceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhcc
Confidence 2455555555677788764 77889999999999999999999998775443111111 1112 2223347899999
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g 406 (480)
.|+|+||+++++++++.+.......+++.++..+.++.+.|. ..+++.+++++..+..++.+.+..+.+++ ....+
T Consensus 236 ~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~ 312 (387)
T PRK08912 236 LTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLG--KPDDYFEGMRADLARSRDRLAAGLRRIGF-PVLPS 312 (387)
T ss_pred CcCceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCC
Confidence 899999999999998887654444557777777777777664 22333333333333333333333333332 22233
Q ss_pred -cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 407 -RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY------GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 407 -~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~------~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.|+++|+.+..... ......+++.|+ ++||++.++..| .+++||+.. .+++++++++++|.++++
T Consensus 313 ~g~~~l~~~l~~~~~-----~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 313 QGTYFLTVDLAPLGL-----AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARR 385 (387)
T ss_pred CcceEEEecccccCC-----CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 35677887743110 012456777765 679999987543 368999954 579999999999999886
Q ss_pred h
Q 011669 479 K 479 (480)
Q Consensus 479 ~ 479 (480)
+
T Consensus 386 ~ 386 (387)
T PRK08912 386 R 386 (387)
T ss_pred c
Confidence 5
No 161
>PRK07550 hypothetical protein; Provisional
Probab=99.94 E-value=1.4e-24 Score=221.04 Aligned_cols=341 Identities=13% Similarity=0.090 Sum_probs=212.5
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEAN 171 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~--~~~~~v~f~~sGseA~ 171 (480)
.|..++||..|.... -.++.+.+++.+.+.... +....+..+....+++.+.+..+ ...++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVPGY---PPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCCCC---CCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 456679998888653 236788888887664321 11111222334445555544432 3457899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
..++++... +++.|++.+++|.+...... . .|...++++......|..| .++++++++.
T Consensus 104 ~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~-~------------~g~~~~~v~~~~~~~~~~~----~~~l~~~~~~-- 162 (386)
T PRK07550 104 WAAMVTLAG--AGDEVILPLPWYFNHKMWLD-M------------LGIRPVYLPCDEGPGLLPD----PAAAEALITP-- 162 (386)
T ss_pred HHHHHHhcC--CCCEEEEcCCCCcchHHHHH-h------------cCCEEEEEecCCCcCCCCC----HHHHHHHhcc--
Confidence 998887643 67889999999966543221 1 1333333332111222223 5677777752
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-cccc---CCCcceeeeccccc
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAH---GVVPDIVTMAKGIG 327 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~---~~~pDivt~sK~~g 327 (480)
++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+..... +... .....+.+|||.++
T Consensus 163 --~~~~v~~~~P~NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 163 --RTRAIALVTPNNPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred --cCcEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 444544444456777764 7888999999999999999999999887432211111 1111 12233458999999
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
.|+|+||+++++++++.+.......+.+.+.+++.++.++|+.+++ ++..+.+++..+++.+.|.+ ++.+...
T Consensus 240 ~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 315 (386)
T PRK07550 240 LTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR----LPGWELL 315 (386)
T ss_pred CcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh----CCCceeC
Confidence 8999999999999888777654445666788888888877763221 12223333334444444433 3222222
Q ss_pred eccceeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 405 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
...|.++|+.+.... ....++++.| .++||.+.++..+ .+++||+.. ..+++++++++++|.++
T Consensus 316 ~~g~~~~~~~~~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPD-------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCC-------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 334667788763211 1245677766 4689999997543 368999975 35799999999999874
No 162
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.6e-24 Score=218.01 Aligned_cols=323 Identities=16% Similarity=0.125 Sum_probs=207.7
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC---CCCCEEEEeCCHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~---~~~~~v~f~~sGseA~~~ 173 (480)
++..++||.+|.+.. ..+|.+.+++.+......+....+..+...++++.+.+.++ .+.++|++|+|+++++..
T Consensus 19 ~~~~~i~l~~~~p~~---~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 19 HPDGIVDLSVGTPVD---PVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCCeEEccCCCCCC---CCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 345679998886543 35688899887765433232222333445566666655433 456899999999999998
Q ss_pred HHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 174 Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
++.+.. ..+++.|++.+++|.+........ |...+.+++ .+.+ + ..
T Consensus 96 ~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~-------------g~~~~~v~~-------------~~~l----~---~~ 141 (357)
T TIGR03539 96 LPTLLG-LGPGDTVVIPELAYPTYEVGALLA-------------GATPVAADD-------------PTEL----D---PV 141 (357)
T ss_pred HHHHHc-CCCCCEEEECCCCcHHHHHHHHhc-------------CCEEeccCC-------------hhhc----C---cc
Confidence 776542 136788999999998765443222 223333221 1222 1 13
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccc------cCCCcceeeecccc
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEA------HGVVPDIVTMAKGI 326 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~------~~~~pDivt~sK~~ 326 (480)
++++++++..+|++|.+. +.+.+++|.++|++||+++|+||+|..|.+.+ .... +.. .+...-+.+|||.+
T Consensus 142 ~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 142 GPDLIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEG-RPVSILDPRVCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred CccEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCC-CCccceecccCCCccccEEEEecccccc
Confidence 677888877788888764 78889999999999999999999998886554 2211 110 01112233799999
Q ss_pred c-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 327 G-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
+ +|+|+||+++++++++.+........++.+.+++.++.++|+ ++...++.+..-+..++.+.+...+++......
T Consensus 220 ~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p 296 (357)
T TIGR03539 220 NLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKPALEKAGFRIDHS 296 (357)
T ss_pred CCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 6 799999999999998877654444567778888888877774 223333333322233333333333333221222
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
..|+++|+.+.. ....+.+.|.++||.+.++..+ .+++||+. ..+++++++++++|
T Consensus 297 ~~~~~~~~~~~~----------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~~~~~i~~~~~~l 356 (357)
T TIGR03539 297 EAGLYLWATRGE----------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TATDERIAAAVARL 356 (357)
T ss_pred CccEEEEEECCC----------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cCCHHHHHHHHHhh
Confidence 345667776521 1345778889999999987543 37899995 45789999999876
No 163
>PRK08175 aminotransferase; Validated
Probab=99.94 E-value=3.8e-24 Score=218.29 Aligned_cols=344 Identities=14% Similarity=0.108 Sum_probs=215.7
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHh----C--CCCCC-EEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASK----M--PGNLK-VVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~----~--~~~~~-~v~f~~sGse 169 (480)
|+.++||..|.+.. ..+|.+.+++.+.+.... ...|. .....+|++.++++ + +.+.+ ++++|+|+++
T Consensus 28 ~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 28 GEDIIDFSMGNPDG---PTPPHIVEKLCEVAQRPD--THGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred CCCeEEcCCCCCCC---CCCHHHHHHHHHHHhCCC--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 45678888775543 456778888877664321 11222 12234454544443 2 23344 6999999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
++..++.... .+++.|++.+++|.......... |+..+.+|....+. ..++++++++.
T Consensus 103 ~l~~~~~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~-------~~~~l~~~l~~ 160 (395)
T PRK08175 103 GLAHLMLATL--DHGDTVLVPNPSYPIHIYGAVIA-------------GAQVRSVPLVEGVD-------FFNELERAIRE 160 (395)
T ss_pred HHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHHc-------------CCeEEEEecccCCC-------cHHHHHHHHhh
Confidence 9998877553 36788999999997654443221 33333333211111 14677777764
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccc-cCCCcceeeeccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEA-HGVVPDIVTMAKG 325 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~-~~~~pDivt~sK~ 325 (480)
. ..+++++++...+|++|.+ .+.+.+++|.++|++||+++|+||+|..+-..+..... .+. .+...-+.+|||.
T Consensus 161 ~-~~~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 238 (395)
T PRK08175 161 S-YPKPKMMILGFPSNPTAQC-VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKS 238 (395)
T ss_pred c-cCCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccc
Confidence 2 2356777777667788876 48888999999999999999999999887544411111 111 1222234579999
Q ss_pred cc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 326 IG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 326 ~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
+| .|+|+||+++++++++.+........++.+.+.+.++.+.|+. .+.+.+++++.-+..++.+.+..+.+++....
T Consensus 239 ~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 316 (395)
T PRK08175 239 YNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG--DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEM 316 (395)
T ss_pred ccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 97 7999999999999998877544444566677778877777752 22333333332222333333333333432223
Q ss_pred eccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 405 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
...|+++|+++..... ......+++.++ +.||.+.++..+ .+++||+. ..+++.+.+++++|.+++++
T Consensus 317 p~~g~~i~i~l~~~~~-----~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 317 PKASMYVWAKIPEPYA-----AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCEEEEEEEECCcccC-----CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHh
Confidence 3468889998843210 001356766654 689999987433 35899995 46899999999999998865
No 164
>PRK06855 aminotransferase; Validated
Probab=99.94 E-value=2e-24 Score=222.60 Aligned_cols=356 Identities=11% Similarity=0.047 Sum_probs=207.1
Q ss_pred CCEEEeccCCcccccCC-CCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCG-HCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMP--GNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~--~~~~~v~f~~sGseA~ 171 (480)
|+.++++..|.+.. .+ -.++.+.+++.+.+.... +....+..+....+++.+.+..+ .+.++|++|+|+++|+
T Consensus 31 g~~~~~~~~G~p~~-~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al 109 (433)
T PRK06855 31 GVKITWENIGDPIA-KGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI 109 (433)
T ss_pred cccccccccCCCcc-cCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence 45566666555422 12 246778888887664421 11112222334444444444322 3457899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
..++.+ ..+++.|++.+++|+++........ |+..+.+|......|..| .++|++.++..
T Consensus 110 ~~~~~l---~~~Gd~Vlv~~P~Y~~~~~~~~~~~------------g~~~v~v~~~~~~~~~~d----~~~l~~~~~~~- 169 (433)
T PRK06855 110 AKIYGL---LRREARVIGPSPAYSTHSSAEAAHA------------GYPPVTYRLDPENNWYPD----LDDLENKVKYN- 169 (433)
T ss_pred HHHHHh---cCCCCeEEEeCCCCchHHHHHHHhc------------CCeEEEEecccccCCCCC----HHHHHHHHhcC-
Confidence 988752 3467899999999998553221111 222222221111223333 57788887531
Q ss_pred CCceE-EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cc-cC-CCcceeeeccccc
Q 011669 252 SGHVA-GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EA-HG-VVPDIVTMAKGIG 327 (480)
Q Consensus 252 ~~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~-~~-~~pDivt~sK~~g 327 (480)
.+++ .++++| +|++|.+ .+++.+++|.++|++||+++|+||+|..|.+.+..+..+ .. .+ ...-+.+|||.++
T Consensus 170 -~~~~~i~l~~P-~NPTG~~-~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~ 246 (433)
T PRK06855 170 -PSIAGILLINP-DNPTGAV-YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELP 246 (433)
T ss_pred -CCceEEEEECC-CCCCCcC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccC
Confidence 2344 455555 6777765 589999999999999999999999999886555222111 11 11 1223447999998
Q ss_pred -cCccccccccC-----H---HHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhc
Q 011669 328 -NGIPLGAVVTT-----P---EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY 398 (480)
Q Consensus 328 -~G~pig~v~~~-----~---~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~ 398 (480)
.|+|+||++++ + ++++.+..... ...+.+.+++.++.++|+.-.-+++.++.++.-+..++.+.+...++
T Consensus 247 ~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 247 WPGSRCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred CCcceEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999999973 2 23333322221 24456788888888777521112333333333333333343333334
Q ss_pred CceeeEec-cceeEEEEEecCCC-----cCCC--CH------------HHHHHHH-HHHHHcCceeeccCcCC---CEEE
Q 011669 399 GIIGDVRG-RGFLLGVEFVTDRQ-----LKTP--AK------------AETLYIM-DKMKEMGVLVGKGGFYG---NVFR 454 (480)
Q Consensus 399 ~~~~~v~g-~g~~~~i~~~~~~~-----~~~~--~~------------~~~~~~~-~~l~~~Gv~v~~~~~~~---~~iR 454 (480)
+.+...++ .|+++|+.+..... .+.. +. .....++ ..+.++||.+.||..|+ +.+|
T Consensus 326 ~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~R 405 (433)
T PRK06855 326 PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFR 405 (433)
T ss_pred CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceE
Confidence 32332334 35788888743200 0000 00 0022344 45678899999986553 4699
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 455 ITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 455 i~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
|+... .+++++++++++|.+++++
T Consensus 406 ls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 406 VTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEECC-CcHHHHHHHHHHHHHHHHH
Confidence 99543 5899999999999998864
No 165
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.9e-24 Score=213.00 Aligned_cols=323 Identities=17% Similarity=0.139 Sum_probs=215.2
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
..+||..|... ++ .+|.+.+++.+.+... ....|..+...++++.++++++.+.++|++++|+++++..+++...
T Consensus 23 ~~~~l~~~~~~--~~-~p~~~~~a~~~~~~~~--~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~ 97 (351)
T PRK14807 23 YKYKMDANETP--FE-LPEEVIKNIQEIVKSS--QVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFI 97 (351)
T ss_pred ceeEccCCCCC--CC-CCHHHHHHHHHHhhcC--cccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhc
Confidence 34777776654 33 5789999998877532 1234555557889999999998777899999999999999888653
Q ss_pred hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE
Q 011669 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi 259 (480)
.+++.|++.+++|.++....... |...+.++.. ..|+.| .+++++.++. .++++++
T Consensus 98 --~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~~~~~~---~~~k~v~ 153 (351)
T PRK14807 98 --NKGDVVIYPHPSFAMYSVYSKIA-------------GAVEIPVKLK--EDYTYD----VGSFIKVIEK---YQPKLVF 153 (351)
T ss_pred --CCCCEEEEeCCChHHHHHHHHHc-------------CCeEEEeecC--CCCCCC----HHHHHHHhhc---cCCCEEE
Confidence 36788999999997654432222 2222232221 112223 5677777752 2567777
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcceeeeccccc-cCcccccccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLGAVVT 337 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig~v~~ 337 (480)
+...+|++|.+.+ .+++.++|++++.++|+||+|.+|. +..... .+..+...-+-+|||.++ .|+|+||+++
T Consensus 154 l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~ 227 (351)
T PRK14807 154 LCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVA 227 (351)
T ss_pred EeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchHHHhhhCCCEEEEecchHhcccchhceeeeec
Confidence 7777888888876 7888888988889999999998773 312111 112222233447999999 8999999999
Q ss_pred CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEec
Q 011669 338 TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417 (480)
Q Consensus 338 ~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~ 417 (480)
++++++.+..... .++.+++++.++.+.|+.-.-++..+++++..+++.+.|+ +++.+...++.|.++|+.+..
T Consensus 228 ~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~----~~~g~~~~~~~~~~~~i~~~~ 301 (351)
T PRK14807 228 NENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELS----KIPGIKVYPSKTNFILVKFKD 301 (351)
T ss_pred CHHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECcCCccEEEEEcCC
Confidence 9999988865432 3556788888888877631112222333333344444433 333333345567888887731
Q ss_pred CCCcCCCCHHHHHHHHHHHHHcCceeeccCc---CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---YGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
...+.+.|+++||.+.++.. ..+++||+. .+.++.+.+++.|++++
T Consensus 302 -----------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 -----------ADYVYQGLLERGILVRDFSKVEGLEGALRITV---SSCEANDYLINGLKELL 350 (351)
T ss_pred -----------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEc---CCHHHHHHHHHHHHHhh
Confidence 35678889999999977532 246899993 36788999999998864
No 166
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=2.3e-24 Score=220.26 Aligned_cols=330 Identities=14% Similarity=0.103 Sum_probs=210.5
Q ss_pred CCcccccCCCCCHHHHHHHHHHHHhcc--ccc-----cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 106 GGIATVCCGHCHPYVVDSIVNQIKRIQ--HST-----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 106 ~g~~~~~lGh~~p~v~~A~~~~~~~~~--~~~-----~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
.+.+....||++|.+++++.+++ ... +.. ..+..+...+++++++++++.+.+.++|+++|+++.+.+++.+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 44555667999999999887777 321 111 1122346678999999988766557888888888888888877
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
+...++.+.|++...+|+.....+...+... |.....+|... .+..| .+++++.+. +++++|
T Consensus 102 ~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~--------g~~~~~v~~~~--~~~~d----~~~l~~~i~----~~t~~v 163 (398)
T cd00613 102 IRAYHKRNKVLVPDSAHPTNPAVARTRGEPL--------GIEVVEVPSDE--GGTVD----LEALKEEVS----EEVAAL 163 (398)
T ss_pred HhcccCCCEEEEcCccCcchHHHHHHhcccC--------CcEEEEeccCC--CCCcC----HHHHHHhcC----CCeEEE
Confidence 6543223344455668888877776654211 22222222111 11112 567777664 368999
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceee--eccccc----cCccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIG----NGIPL 332 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g----~G~pi 332 (480)
++++++ ++|.+ .+++++|+++|++||+++|+|++|......+ ....+ .+|+++ ++|.+. ||+++
T Consensus 164 iv~~~~-~~G~~---~~~l~~i~~la~~~g~~livD~~~~~~~~~~----~~~~~--~~d~~~~s~~K~~~p~g~Ggp~~ 233 (398)
T cd00613 164 MVQYPN-TLGVF---EDLIKEIADIAHSAGALVYVDGDNLNLTGLK----PPGEY--GADIVVGNLQKTGVPHGGGGPGA 233 (398)
T ss_pred EEECCC-CCcee---cchHHHHHHHHHhcCCEEEEEeccccccCCC----ChHHc--CCCEEEeeccccCCCCCCCCCce
Confidence 999875 56776 3568999999999999999999885321111 01112 367764 568762 36889
Q ss_pred cccccCHHHHHhhcCC-----------------------------CccccCCCcHHHHHHHHHHHHHhhhh---HHHHHH
Q 011669 333 GAVVTTPEIAEVLTRR-----------------------------NYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNA 380 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~-----------------------------~~~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~ 380 (480)
|+++.++++++.+... ...++++++++.++++.++++.+.++ ++.++.
T Consensus 234 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~ 313 (398)
T cd00613 234 GFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERA 313 (398)
T ss_pred eEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9999998888765221 11235666778888888777766554 355788
Q ss_pred HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCC
Q 011669 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPL 459 (480)
Q Consensus 381 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~ 459 (480)
++++++++++|+++.... .... .....+++.+.. +.......+++.|+++||++.... ...+.+|++|++
T Consensus 314 ~~~~~~l~~~L~~~~~~~-~~~~--~~~~~v~~~~~~------~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~ 384 (398)
T cd00613 314 HLNANYLAKRLKEVGGVL-PFNG--PFFHEFVLRLPP------LYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTE 384 (398)
T ss_pred HHHHHHHHHHHHhcCCcc-cCCC--CeeEEEEEEcCC------cchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCC
Confidence 888888888887752111 0111 111112333311 001245678899999999875421 124789999999
Q ss_pred CCCHHHHHHHHHHH
Q 011669 460 CFTKEDADYLVDVM 473 (480)
Q Consensus 460 ~~t~~~id~~l~~l 473 (480)
.+|++|||+++++|
T Consensus 385 ~~t~edid~~~~~L 398 (398)
T cd00613 385 TETKEELDALLEAL 398 (398)
T ss_pred CCCHHHHHHHHHhC
Confidence 99999999999864
No 167
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4e-24 Score=218.49 Aligned_cols=337 Identities=16% Similarity=0.191 Sum_probs=209.4
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC-----CCCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM-----PGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~-----~~~~~~v~f~~sGseA~ 171 (480)
|..++||..|.... ..++.+.+++.+..... ..|. .....++++.+++++ +.+.++|++|+||++|+
T Consensus 29 ~~~~i~l~~~~~~~---~~~~~~~~a~~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al 101 (397)
T PRK07568 29 GIKVYHLNIGQPDI---KTPEVFFEAIKNYDEEV----LAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAI 101 (397)
T ss_pred CCCEEEecCCCCCC---CCCHHHHHHHHHHhcCC----cCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHH
Confidence 34577887776543 23678888887654322 1122 334566666666664 34567899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCC-ChHHHHHHHHHHHHcc
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGA-DGEMYAKDVQDLIDFG 250 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~-d~~~~~~~le~~i~~~ 250 (480)
..+++... .+++.|++.+++|....... .. .|+..+.++......|.. + .++++++++
T Consensus 102 ~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~------------~g~~~~~v~~~~~~g~~~~~----~~~l~~~~~-- 160 (397)
T PRK07568 102 LFAMMAIC--DPGDEILVPEPFYANYNGFA-TS------------AGVKIVPVTTKIEEGFHLPS----KEEIEKLIT-- 160 (397)
T ss_pred HHHHHHhc--CCCCEEEEecCCCccHHHHH-HH------------cCCEEEEeecCcccCCCCCC----HHHHHHhcC--
Confidence 99987653 36678999999886543221 11 133333333211111211 1 356776664
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc-cccCCCcce---eeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-EAHGVVPDI---VTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~-~~~~~~pDi---vt~sK~~ 326 (480)
.++++|++...++++|.+ .+.+.+++|.++|+++|+++|+||+|.+|.+.+...... ...+..+++ -+|||.+
T Consensus 161 --~~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~ 237 (397)
T PRK07568 161 --PKTKAILISNPGNPTGVV-YTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY 237 (397)
T ss_pred --ccceEEEEECCCCCCCcc-CCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc
Confidence 255666655556777866 477789999999999999999999999986655212121 111222333 3799999
Q ss_pred c-cCccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE
Q 011669 327 G-NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404 (480)
Q Consensus 327 g-~G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v 404 (480)
+ .|+|+||++++ +++++.+..... .+++.+.+.+.++.++|+. .+.+.++.++.-+..++.+.+..++++.+...
T Consensus 238 ~~~G~R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 238 SACGARIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDT--PESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred cCCCcceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 9 69999999985 678776543222 2467788888888887753 22333333332222333333333334333333
Q ss_pred ecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHH------cCceeeccCcC-------CCEEEEeCCCCCCHHHHHHHH
Q 011669 405 RGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKE------MGVLVGKGGFY-------GNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 405 ~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~v~~~~~~-------~~~iRi~p~~~~t~~~id~~l 470 (480)
.+. |+++|+.+... ....+.+.|.+ +||++.|+..| .+++||+. +.+++++++++
T Consensus 315 ~p~g~~~~~~~l~~~---------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~~~~~~~~~~ 383 (397)
T PRK07568 315 KPKGAFYIIAKLPVD---------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VLNEEDLKRAM 383 (397)
T ss_pred CCCcceEEEEecCCC---------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eCCHHHHHHHH
Confidence 333 55678877321 13456666654 69999987433 35899994 56789999999
Q ss_pred HHHHHHHhh
Q 011669 471 DVMDYSLSK 479 (480)
Q Consensus 471 ~~l~~~l~~ 479 (480)
++|.+++++
T Consensus 384 ~~l~~~l~~ 392 (397)
T PRK07568 384 EILKEALEK 392 (397)
T ss_pred HHHHHHHHH
Confidence 999998864
No 168
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=6.2e-24 Score=214.11 Aligned_cols=327 Identities=15% Similarity=0.102 Sum_probs=209.0
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
..++||..|... ++ .+|.+.+++.+.+... ..|+.+...+|++.|+++++.+.++|++|+|++|++..+++..
T Consensus 22 ~~~i~l~~~~n~--~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASINP--LG-PPESVIAAIQSALSAL----RHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCCC--CC-CCHHHHHHHHHHHHHh----hcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 468998876543 44 6789999988777642 2344444568999999998777889999999999999888753
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
. +++.|++.+++|.++...+... |+..+++|....+.+..+ ..+++++.... . +++++
T Consensus 95 ~---~g~~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~~~~~~~~~----~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 95 A---QLRAVYLITPAFGDYRRALRAF-------------GATVKELPLPLDQPSPGL----TLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred C---CCCeEEEECCCcHHHHHHHHHc-------------CCeEEEEecccccCCccc----ccCHHHHHHhc-c-CCCEE
Confidence 2 4568999999998876555443 222233222111111000 12233333321 2 34455
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-c---cccCCCcceeeeccccc-cCcccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-F---EAHGVVPDIVTMAKGIG-NGIPLG 333 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~---~~~~~~pDivt~sK~~g-~G~pig 333 (480)
++...+|++|.+.. .++|.++++++++ +|+||+|.+|.+.+ .... . +..+...-+.+|||.++ +|+|+|
T Consensus 153 ~l~nP~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 226 (360)
T PRK07392 153 LLNNPHNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLG 226 (360)
T ss_pred EEeCCCCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchhee
Confidence 55455777887765 6788889999985 66699999986554 2111 1 11112223347999999 999999
Q ss_pred ccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEE
Q 011669 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (480)
Q Consensus 334 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 413 (480)
|+++++++++.+.... ..++.+.+++.++.++|+ +..+.++.++..+..++.|.+..++++.+....+.|.++|+
T Consensus 227 ~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~ 301 (360)
T PRK07392 227 YAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLV 301 (360)
T ss_pred eeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEE
Confidence 9999999988876533 347788999998888875 33444444333333344443333344433334466788887
Q ss_pred EEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 414 EFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
++.. ...++.+.+ .++||.+.++..+ .+++||+. .+.++.+++.+.|+++++
T Consensus 302 ~~~~----------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~---~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 302 QSQG----------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAV---RTEAENQRLLEALAAILA 358 (360)
T ss_pred EcCC----------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhh
Confidence 7631 135566665 5679999998544 36899993 345666777777776654
No 169
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=5.5e-24 Score=222.19 Aligned_cols=341 Identities=16% Similarity=0.130 Sum_probs=205.9
Q ss_pred CHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 117 HPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 117 ~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
+..+.+++.+.++........|. .....+|++.+++++ +.+.++|++|+|+++|+..+++.... .+++.|++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~~gD~Vlv 168 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIG-DPSDGVMI 168 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcc-CCCCEEEE
Confidence 34677777766554321112233 234455555555553 23567899999999999999986641 25788999
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC--CCceEEEEEcccCCCC
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVG 267 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~ 267 (480)
.+++|.++...+.... ...+.+|......|+.| .+++++.++... ..+++++++...+|++
T Consensus 169 ~~P~y~~y~~~~~~~g-------------~~~v~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT 231 (481)
T PTZ00377 169 PIPQYPLYSAAITLLG-------------GKQVPYYLDEEKGWSLD----QEELEEAYEQAVRNGITPRALVVINPGNPT 231 (481)
T ss_pred CCCCchhHHHHHHHcC-------------CEEEEEEeccccCCCCC----HHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence 9999987765544332 22233332222234334 567777775311 1256654444457778
Q ss_pred cceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC-CCcccccc--cCCCc------ce---eeecccc-c-cCcccc
Q 011669 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG-SHFWGFEA--HGVVP------DI---VTMAKGI-G-NGIPLG 333 (480)
Q Consensus 268 G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G-~~~~~~~~--~~~~p------Di---vt~sK~~-g-~G~pig 333 (480)
|.+ .+.+.+++|.++|++||+++|+||+|..+.+.+ ..+..+.. .+..+ .+ -+|||.+ + .|||+|
T Consensus 232 G~~-~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG 310 (481)
T PTZ00377 232 GQV-LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGG 310 (481)
T ss_pred CcC-CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceE
Confidence 876 488999999999999999999999999875532 11111110 01111 23 3689986 6 699999
Q ss_pred cccc---CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh--h---hHHHHHHHHHHHHH---HHHHHHhHHhcCcee
Q 011669 334 AVVT---TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ--K---DKLQNNAHVVGSYL---KERLTALKDKYGIIG 402 (480)
Q Consensus 334 ~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~--~---~~~~~~~~~~~~~l---~~~L~~l~~~~~~~~ 402 (480)
|+++ ++++++.+.... ..+++.|++++.++.++|+... + +.+.++.++..+.+ ++.+.+..++++.+.
T Consensus 311 ~~~~~~~p~~li~~l~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 311 YFELTNIPPEVREQIYKLA-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred EEEEeCCCHHHHHHHHHHh-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 9986 899988876543 2345788899999988885211 0 12333333332222 222223333344444
Q ss_pred eEecc-ceeEEEEEecCCCcCCC-----CHHHHHHHHHHHHHcCceeeccCcCC-----CEEEEeCCCCCCHHHHHHHHH
Q 011669 403 DVRGR-GFLLGVEFVTDRQLKTP-----AKAETLYIMDKMKEMGVLVGKGGFYG-----NVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 403 ~v~g~-g~~~~i~~~~~~~~~~~-----~~~~~~~~~~~l~~~Gv~v~~~~~~~-----~~iRi~p~~~~t~~~id~~l~ 471 (480)
...+. |+++|+++.-....... .......+...|.++||.+.||..|+ +++||+. ..++++++++++
T Consensus 390 ~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~--~~~~e~l~~~l~ 467 (481)
T PTZ00377 390 CQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI--LPPEEQIEEMVK 467 (481)
T ss_pred eecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEE--CCCHHHHHHHHH
Confidence 44454 56677655211000000 00012223456678899999986553 4899994 578899999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|.+++++
T Consensus 468 rl~~~~~~ 475 (481)
T PTZ00377 468 KIKEFHES 475 (481)
T ss_pred HHHHHHHH
Confidence 99998764
No 170
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=6.7e-24 Score=217.04 Aligned_cols=350 Identities=14% Similarity=0.105 Sum_probs=216.1
Q ss_pred CCCCEEEeccCCcccc--cCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhCCC------CCCEEEEeCC
Q 011669 96 ENGRRYLDAFGGIATV--CCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPG------NLKVVFFTNS 166 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~~~------~~~~v~f~~s 166 (480)
..|..++|+..|.+.. .+ ..++.+.+++.+.+..... ..| +.....++++.+++++.. +.++|++|+|
T Consensus 28 ~~~~~~i~l~~g~p~~~~~~-~~~~~~~~~~~~~l~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G 104 (403)
T TIGR01265 28 NPEKPIIPLSHGDPSVFGNL-RTDPEAEEAVKDALRSGKF--NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSG 104 (403)
T ss_pred hcCCCeEEeCCCCCCccCCC-CCCHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC
Confidence 3577899999887742 11 3568999999887764311 123 344456667777766642 3568999999
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 167 GTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 167 GseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
+++|+..+++... .+++.|++.+++|.++...+... |+....++......|+.| .+++++.
T Consensus 105 ~t~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~ 165 (403)
T TIGR01265 105 CSQAIEICIEALA--NPGANILVPRPGFPLYDTRAAFS-------------GLEVRLYDLLPEKDWEID----LDGLEAL 165 (403)
T ss_pred hHHHHHHHHHHhC--CCCCEEEEeCCCchhHHHHHHHc-------------CCEEEEecCCcccCCccC----HHHHHHH
Confidence 9999999998765 36778999999986543322211 222222221111122223 5667766
Q ss_pred HHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC---Ccceeeec
Q 011669 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV---VPDIVTMA 323 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~---~pDivt~s 323 (480)
+. + +++++++...++++|.+ .+.+.+++|.++|+++|+++|+||+|..|.+.+..+.......- ..-+-+||
T Consensus 166 ~~---~-~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 240 (403)
T TIGR01265 166 AD---E-KTVAIVVINPSNPCGSV-FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGIS 240 (403)
T ss_pred hC---c-CccEEEEecCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecc
Confidence 64 2 45555555556777765 47778999999999999999999999988655522212211111 12233799
Q ss_pred cccc-cCccccccccC--HH-----HHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhH
Q 011669 324 KGIG-NGIPLGAVVTT--PE-----IAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 324 K~~g-~G~pig~v~~~--~~-----~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~ 395 (480)
|.++ .|+|+||++++ ++ +++.+.... ..+++.+.+++.++.++|+. ..+.+.++.++.....++.+.+..
T Consensus 241 K~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L 318 (403)
T TIGR01265 241 KRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLL-QRILGPATIVQGALPDILEN-TPQEFFDGKISVLKSNAELCYEEL 318 (403)
T ss_pred cccCCCcceEEEEEEeCchhhhHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976 79999999984 23 333332221 12456788888888888863 123333333333222333343333
Q ss_pred HhcCceee-EeccceeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHH
Q 011669 396 DKYGIIGD-VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVD 471 (480)
Q Consensus 396 ~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~ 471 (480)
+.++.+.. ....|+++|+++..... +......++++.+ .++||.+.++..+ .+++||+. ...++.++++++
T Consensus 319 ~~~~~~~~~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~ 393 (403)
T TIGR01265 319 KDIPGLVCPKPEGAMYLMVKLELELF---PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITI--TVPESMLEEACS 393 (403)
T ss_pred hcCCCceecCCCceeEEEEecccccc---CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHH
Confidence 33432332 34468888998743210 0000134566664 5789999998654 47899994 467899999999
Q ss_pred HHHHHHhh
Q 011669 472 VMDYSLSK 479 (480)
Q Consensus 472 ~l~~~l~~ 479 (480)
+|.+++++
T Consensus 394 ~l~~~~~~ 401 (403)
T TIGR01265 394 RIKEFCER 401 (403)
T ss_pred HHHHHHHh
Confidence 99998865
No 171
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=211.70 Aligned_cols=325 Identities=15% Similarity=0.124 Sum_probs=213.3
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIM 176 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk 176 (480)
++.++|+..|... ++ .+|++++++.+.+.... ...|+.....+|++.|++++.... ++|++++|+++++..+++
T Consensus 25 ~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMENP--YR-LPAELRAELGERLAEVA--LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCCC--CC-CCHHHHHHHHHHhhccc--cccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 4678998777553 33 57899999998876421 123454556889999999986543 479999999999999887
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
+... +++.|++.+++|.++...+... |+..+.+|.. ..|+.| .+++++.++. .+++
T Consensus 100 ~~~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~i~~~--~~~~~d----~~~l~~~~~~---~~~~ 155 (356)
T PRK04870 100 ACAK--PGATVLAPEPGFVMYRMSAKLA-------------GLEFVGVPLT--ADFTLD----LPAMLAAIAE---HRPA 155 (356)
T ss_pred HhcC--CCCEEEECCCCHHHHHHHHHHc-------------CCEEEEecCC--CCCCCC----HHHHHHHhhc---CCCC
Confidence 6543 6788999999998654432222 3344444322 123333 5677777752 2566
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cCcccccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAV 335 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v 335 (480)
+|++...+|++|.+. +.+.+++|.++| ++++|+||+|..|.... ........+...-+.+||| ++ .|+|+||+
T Consensus 156 ~v~l~~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~ 229 (356)
T PRK04870 156 LVFLAYPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYL 229 (356)
T ss_pred EEEEcCCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhh
Confidence 666665678888776 566666666666 78999999998875321 1111122222233447999 77 69999999
Q ss_pred ccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 336 ~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
++++++++.+.... ..++.+.+++.++..+++..+. ++..+++++..+++.+.|+ +++.+......|.++|+.
T Consensus 230 i~~~~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~~ 303 (356)
T PRK04870 230 AGHPAWIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALA----ALPGVTVFPSAANFILVR 303 (356)
T ss_pred hCCHHHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH----hCCCcEECCCCCeEEEEE
Confidence 99999988876543 3456777888877777752111 1223333334444444443 343333345567788887
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+. . ...+.+.|.++||.+.++..+ .+++||+.. +.++++.++++|++++
T Consensus 304 ~~--------~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 304 VP--------D---AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred CC--------C---HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 62 1 356778899999999987543 468999943 7899999999998763
No 172
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=5.8e-24 Score=214.73 Aligned_cols=322 Identities=16% Similarity=0.127 Sum_probs=208.3
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
+.++|+..|.. .++ .+|.+.+++.+.+... ..|+.+...+|++.+++.++.+.++|++|+|+++++..++...
T Consensus 43 ~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~----~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANEC--PLG-PSPAARDAAARSAALS----GRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCC--CCC-CCHHHHHHHHHHHHHh----cCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 34556655543 233 5789999998876543 2355555889999999999878889999999999999999865
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
.. +++.|++.+++|.++...+... |...+.+|... .|..| .+++++.. + +++++
T Consensus 116 ~~--~gd~Vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~d----~~~l~~~~----~-~~~~v 169 (370)
T PRK09105 116 TS--PTAGLVTADPTYEAGWRAADAQ-------------GAPVAKVPLRA--DGAHD----VKAMLAAD----P-NAGLI 169 (370)
T ss_pred cC--CCCEEEEeCCChHHHHHHHHHc-------------CCeEEEecCCC--CCCCC----HHHHHhcC----C-CCCEE
Confidence 43 5788999999997765443322 33333333211 12223 34444331 2 34455
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcce---eeeccccc-cCccccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI---VTMAKGIG-NGIPLGA 334 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDi---vt~sK~~g-~G~pig~ 334 (480)
++...+|++|.+. +.+.++++.+.|+ +|+++|+||+|..|+... .. .+..+..+++ .+|||.+| .|+|+||
T Consensus 170 ~l~nP~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~-s~--~~~~~~~~~vi~~~SfSK~~g~~GlRiG~ 244 (370)
T PRK09105 170 YICNPNNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDAP-SV--VDLVAQRKDLIVLRTFSKLYGMAGMRLGL 244 (370)
T ss_pred EEeCCCCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccCc-ch--HHHHhhCCCEEEEecccHhhcCCccceee
Confidence 5444467778764 6777777777654 599999999998775321 11 1111223343 37899998 7999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+... ..+..+.+++.++.++|+ ++++.+..++..+..++.+.+..+++++ ....+.|.|++++
T Consensus 245 ~v~~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~~f~~~~ 317 (370)
T PRK09105 245 AAARPDLLAKLARF---GHNPLPVPAAAAGLASLR---DPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVD 317 (370)
T ss_pred eecCHHHHHHHHhc---CCCCcCHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCCcEEEEe
Confidence 99999998887654 234466777777777775 2344444443333444444433333432 2334567776665
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.. ...++++.|.++||.++... ...+++||++. +++++++++++|+++++
T Consensus 318 ~~~----------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 318 VKR----------PAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CCC----------CHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 421 13568888999999995321 13579999933 68899999999998763
No 173
>PRK07337 aminotransferase; Validated
Probab=99.93 E-value=8.5e-24 Score=215.31 Aligned_cols=338 Identities=16% Similarity=0.178 Sum_probs=211.1
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC----C--CCCCEEEEeCCHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM----P--GNLKVVFFTNSGTEA 170 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~----~--~~~~~v~f~~sGseA 170 (480)
|..++||..|.+.. ..+|.+.+++.+.+.... ..|. .....+|++.+++++ + .+.++|++|+|+++|
T Consensus 29 ~~~~i~l~~~~~~~---~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~a 102 (388)
T PRK07337 29 GRDIIHMGIGEPDF---TAPEPVVEAAARALRRGV---TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAA 102 (388)
T ss_pred CCCEEEeCCcCCCC---CCCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHH
Confidence 34568887776653 246889999988775321 1222 222445555555543 3 355789999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..++.... .+++.|++.+++|.+........ |...+.+|......|+.| .+++++.++
T Consensus 103 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~----~~~l~~~~~-- 161 (388)
T PRK07337 103 LLLACLALV--ERGDEVLMPDPSYPCNRHFVAAA-------------EGRPVLVPSGPAERFQLT----AADVEAAWG-- 161 (388)
T ss_pred HHHHHHHhc--CCCCEEEEeCCCchhhHHHHHHc-------------CCEEEEeecCCccCCcCC----HHHHHhhcC--
Confidence 998887653 36788999999998754433222 222222222111123333 566766664
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG 327 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g 327 (480)
+ ++++|++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+ ..... ....++++ +|||.++
T Consensus 162 -~-~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~--~~~~~~vi~~~S~SK~~~ 235 (388)
T PRK07337 162 -E-RTRGVLLASPSNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDA-APVSA--LSLGDDVITINSFSKYFN 235 (388)
T ss_pred -c-cceEEEEECCCCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcCh--hhccCCEEEEEechhhcC
Confidence 2 445555544566777664 78889999999999999999999999886554 22111 11223443 7899998
Q ss_pred -cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCcee-
Q 011669 328 -NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIG- 402 (480)
Q Consensus 328 -~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~- 402 (480)
.|+|+||+++++++++.+.........+.+++++.++.++++.-..+ ...+.+++..+++.+.|++ ++...
T Consensus 236 ~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~ 311 (388)
T PRK07337 236 MTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVP 311 (388)
T ss_pred CchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccc
Confidence 79999999999998887765443344567788888887776421001 1222333333333333333 33322
Q ss_pred eEeccceeEEEEEecCCCcCCCCHHHHHHHHHH-HHHcCceeeccCcC-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MKEMGVLVGKGGFY-----GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 403 ~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~-----~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.....|+++|+++..... +......++++. +.++||.+.+|..+ .+++||+.. .+++++.+++++|.++
T Consensus 312 ~~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 312 VMPDGAFYVYADCRGVAH---PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKL 386 (388)
T ss_pred cCCCeeEEEEEecccccC---CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence 124457889998843110 111123456655 56789999987543 368999955 5799999999999886
Q ss_pred H
Q 011669 477 L 477 (480)
Q Consensus 477 l 477 (480)
+
T Consensus 387 l 387 (388)
T PRK07337 387 F 387 (388)
T ss_pred h
Confidence 5
No 174
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=8e-24 Score=212.73 Aligned_cols=323 Identities=17% Similarity=0.151 Sum_probs=216.1
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
.+|||..+... +| .+|.+.+++.+.+... ..|+.....++++.++++++.+.++|++++|.++++..++....
T Consensus 23 ~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~----~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSNETP--FG-PLPSVRAAIARAAAGV----NRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred cceeccCCCCC--CC-CCHHHHHHHHHHHHhc----CcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhc
Confidence 47898877654 34 4678999998776543 23455678899999999987666789999999998888876543
Q ss_pred hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE
Q 011669 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi 259 (480)
.+++.|++..++|..+.... .. .|...+.+|... .++.| .+++++.++ +++++|+
T Consensus 96 --~~gd~Vli~~p~y~~~~~~~-~~------------~g~~~~~v~~~~--~~~~~----~~~l~~~~~----~~~~~v~ 150 (352)
T PRK03321 96 --GPGDEVIFAWRSFEAYPILV-QV------------AGATPVQVPLTP--DHTHD----LDAMAAAIT----DRTRLIF 150 (352)
T ss_pred --CCCCEEEeCCCCHHHHHHHH-HH------------cCCEEEEccCCC--CCCCC----HHHHHHhhc----cCCCEEE
Confidence 36788998888875432211 11 133333333211 12223 566777664 2556676
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHH--hCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cCcccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLG 333 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~--~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~pig 333 (480)
+...++++|.+.+ .+++.++|++ +|+++|+||+|.+|.+.+....+.......++++ +|||.+| .|+|+|
T Consensus 151 l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG 226 (352)
T PRK03321 151 VCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVG 226 (352)
T ss_pred EeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhh
Confidence 6677888888875 5666777765 6999999999998865441111122222234444 7999999 799999
Q ss_pred ccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEE
Q 011669 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413 (480)
Q Consensus 334 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i 413 (480)
|+++++++++.+... ..+++.+++++.++.++|+. .+.+.++.++..+.. +.+.+...++++ ...+..|+++|+
T Consensus 227 ~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r-~~~~~~L~~~~~-~~~~~~g~~i~i 300 (352)
T PRK03321 227 YAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAA--EDELLERVDAVVAER-DRVRAALRAAGW-TVPPSQANFVWL 300 (352)
T ss_pred hhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHH-HHHHHHHHHCCC-ccCCCCCCEEEE
Confidence 999999999888754 35678889999988888852 334444444443322 223333333332 223456888888
Q ss_pred EEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 414 EFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.. ....+.+.|+++||.+.+.+ .+.|||+ ..+.+++++++++|++++..
T Consensus 301 ~l~~----------~~~~~~~~l~~~gI~v~~~~--~~~iRi~---~~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 301 PLGE----------RTADFAAAAAEAGVVVRPFA--GEGVRVT---IGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred eCCC----------CHHHHHHHHHHCCEEEEccC--CCcEEEe---eCCHHHHHHHHHHHHHHhcc
Confidence 7621 14568888999999998743 4569999 46899999999999998754
No 175
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=211.17 Aligned_cols=323 Identities=17% Similarity=0.167 Sum_probs=207.9
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ 177 (480)
++.+|||..|... ++ .+|.+.+++.+.+... ...|+.....+|++.+++++..+.++|++|+|+++|+..+++.
T Consensus 23 ~~~~i~l~~~~~~--~~-~~~~~~~a~~~~~~~~---~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNENP--YP-PSPKVLEAIRAALGDD---LRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCCC--CC-CCHHHHHHHHHHhhhh---hhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHH
Confidence 3568999888765 33 4789999998876642 1235555567899999999987778999999999999999987
Q ss_pred HHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEE
Q 011669 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (480)
Q Consensus 178 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~ 257 (480)
... +++.|++.+++|..+....... |+....+|.. ..|+-| .++++ + .....
T Consensus 97 l~~--~gd~vlv~~P~y~~~~~~~~~~-------------g~~~~~v~~~--~~~~~d----~~~l~---~----~~~~v 148 (353)
T PRK05387 97 FFN--HDRPLLFPDITYSFYPVYAGLY-------------GIPYEEIPLD--DDFSID----VEDYL---R----PNGGI 148 (353)
T ss_pred hcC--CCCEEEEeCCCHHHHHHHHHHc-------------CCEEEEeecC--CCCCCC----HHHHH---h----cCCEE
Confidence 643 6788999999996554332211 2322222221 122223 34443 2 12234
Q ss_pred EEEcccCCCCcceeCCCChHHHHHHHHHHh-CCEEEEcccccCccccCCCccc-ccccCCCcceeeeccccc-cCccccc
Q 011669 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKA-GGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLGA 334 (480)
Q Consensus 258 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig~ 334 (480)
++++| +|++|.+.+ .+++.++++++ |+++|+||+|..|+.. .... .+..+...-+.+|||.++ .|+|+||
T Consensus 149 ~~~~P-~NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~~--~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 221 (353)
T PRK05387 149 IFPNP-NAPTGIALP----LAEIERILAANPDSVVVIDEAYVDFGGE--SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGF 221 (353)
T ss_pred EEeCC-CCCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCCc--chHHHHhhCCCEEEEEehhHhhcchhhhcee
Confidence 45555 777787765 55556666554 9999999999877421 1111 111222222337999999 8999999
Q ss_pred cccCHHHHHhhcCCCc-cccCCCcHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 335 VVTTPEIAEVLTRRNY-FNTFGGNPVCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~-~~t~~~~~~~~aaa~a~L~~i~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
+++++++++.+..... ..+++.+.+++.++.++|+..+ -++..+++++..+++.+.|++ ++. ......|.++|
T Consensus 222 ~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~-~~~~~~~~~~~ 296 (353)
T PRK05387 222 AIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGF-EVLPSKANFVF 296 (353)
T ss_pred eecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-eECCCcCcEEE
Confidence 9999999888765432 2456778888888888775211 012233344444444444443 333 22344566777
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+.. .....+.+.|.++||.+...+. ..+++||+.. +++++++++++|++++.
T Consensus 297 ~~~~~---------~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 297 ARHPS---------HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EECCC---------CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 66521 1145688889999999975432 2468999943 77999999999999875
No 176
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=5.1e-24 Score=213.21 Aligned_cols=320 Identities=20% Similarity=0.199 Sum_probs=208.0
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC------CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP------GNLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~------~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
.+|.+++++.+ .................++++.+++.+. ...+.+++++||++|+..+++.+.. .+++|++
T Consensus 12 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~g~~vl~ 88 (350)
T cd00609 12 PPPEVLEALAA-AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--PGDEVLV 88 (350)
T ss_pred CCHHHHHHHHH-HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--CCCEEEE
Confidence 45666666654 1111111112223344445555554442 2256899999999999999987643 5678999
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
.+++|++........ +.....++....+.+..+ .+.++..+ .+++++|++++.++++|.
T Consensus 89 ~~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~----~~~~~~~~----~~~~~~v~i~~~~~~tG~ 147 (350)
T cd00609 89 PDPTYPGYEAAARLA-------------GAEVVPVPLDEEGGFLLD----LELLEAAK----TPKTKLLYLNNPNNPTGA 147 (350)
T ss_pred cCCCchhHHHHHHHC-------------CCEEEEEecccccCCccC----HHHHHhhc----CccceEEEEECCCCCCCc
Confidence 999887755443322 122222222111111111 12333332 347899999999889998
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcc----cccccCCCcceeeeccccc-cCccccccccCH-HHHH
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW----GFEAHGVVPDIVTMAKGIG-NGIPLGAVVTTP-EIAE 343 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~----~~~~~~~~pDivt~sK~~g-~G~pig~v~~~~-~~~~ 343 (480)
+. +.+.+++|.++|+++|+++|+||+|++++..+ ... .....+....+.+++|.++ +|+++|++++++ ++.+
T Consensus 148 ~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~ 225 (350)
T cd00609 148 VL-SEEELEELAELAKKHGILIISDEAYAELVYDG-EPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE 225 (350)
T ss_pred cc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCC-cccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH
Confidence 65 67788999999999999999999999887655 222 1122233333447899999 889999999999 7888
Q ss_pred hhcCCCccccCCCcHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHhHHhcCcee-eEeccceeEEEEEecCCC
Q 011669 344 VLTRRNYFNTFGGNPVCTAAGHAVLKVIQ--KDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRGFLLGVEFVTDRQ 420 (480)
Q Consensus 344 ~l~~~~~~~t~~~~~~~~aaa~a~L~~i~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~g~~~~i~~~~~~~ 420 (480)
.+.......+++.++.++.++.++|+... -+...+++.++.+++++.|++. +... .....|.++++.+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~~~~~~-- 299 (350)
T cd00609 226 RLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWLDLPEG-- 299 (350)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEEecCCC--
Confidence 88766556677888888888888887652 2334455555566666655553 3222 3455677888776321
Q ss_pred cCCCCHHHHHHHHHHHHHcCceeeccCc----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 421 LKTPAKAETLYIMDKMKEMGVLVGKGGF----YGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 421 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.....+.+.|.+.||.+.++.. .++++||+++.. ++|+++++++|++
T Consensus 300 ------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 300 ------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred ------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 1245567777888999987643 247899998866 9999999999863
No 177
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.93 E-value=1.7e-23 Score=200.00 Aligned_cols=350 Identities=12% Similarity=0.103 Sum_probs=234.4
Q ss_pred ccEEEeCCC--CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCC--CCCEEEEeC
Q 011669 90 MQYLFDENG--RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTN 165 (480)
Q Consensus 90 G~~l~d~dG--~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~ 165 (480)
.+.=||..+ ..+|-+--..... -.+|+|++|+++.++.+..+.+....+...++.++.++++.. ..+.++|+.
T Consensus 14 ~s~KWd~~~g~~DvlPmWVADMDf---~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p 90 (388)
T COG1168 14 NSLKWDAHPGNEDVLPMWVADMDF---PTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVP 90 (388)
T ss_pred CceeccccCCCCCcceeeeecccC---CCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcC
Confidence 344455554 4454443322222 367999999999999865544422334677888888888753 456899999
Q ss_pred CHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcC-CCCCCChHHHHHHHH
Q 011669 166 SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYR-GVFGADGEMYAKDVQ 244 (480)
Q Consensus 166 sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~-~~~~~d~~~~~~~le 244 (480)
+.--++..+|+.... +++.|++..|.|+-.....-. .|-..++.|..+. +.|.-| .++||
T Consensus 91 ~VVpgi~~~I~~~T~--~gd~Vvi~tPvY~PF~~~i~~-------------n~R~~i~~pL~~~~~~y~iD----~~~LE 151 (388)
T COG1168 91 GVVPGISLAIRALTK--PGDGVVIQTPVYPPFYNAIKL-------------NGRKVIENPLVEDDGRYEID----FDALE 151 (388)
T ss_pred cchHhHHHHHHHhCc--CCCeeEecCCCchHHHHHHhh-------------cCcEEEeccccccCCcEEec----HHHHH
Confidence 999999999997665 788999999999754432211 2333444444321 122223 78899
Q ss_pred HHHHccCCCc-eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcc-----
Q 011669 245 DLIDFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD----- 318 (480)
Q Consensus 245 ~~i~~~~~~~-~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pD----- 318 (480)
+.+.. ++ ...++|+|.|+ +|.+ .+++.|.+|.+||.|||+.+|+||++..+-..|.+.+.+. .+.++
T Consensus 152 ~~~~~---~~vkl~iLCnPHNP-~Grv-wt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a~~~ 224 (388)
T COG1168 152 KAFVD---ERVKLFILCNPHNP-TGRV-WTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFADNS 224 (388)
T ss_pred HHHhc---CCccEEEEeCCCCC-CCcc-ccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhhcce
Confidence 88874 34 45566666554 5544 6999999999999999999999999999987773333222 12222
Q ss_pred --eeeeccccc-cCccccccccC-HHHHHhhcCC-CccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 011669 319 --IVTMAKGIG-NGIPLGAVVTT-PEIAEVLTRR-NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 319 --ivt~sK~~g-~G~pig~v~~~-~~~~~~l~~~-~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
+.+-||+|+ +|+.+++++.+ +++.+.+... ...+..+.|.++..|..++.+. .+.+++.+.+..+..++.+.+
T Consensus 225 it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~--G~~WLd~L~~yl~~N~~~~~~ 302 (388)
T COG1168 225 ITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ--GEPWLDELLEYLKDNRDYVAD 302 (388)
T ss_pred EEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHH
Confidence 223479999 89999987766 5554444332 2345567789999999999884 445555555555545555544
Q ss_pred hHHh-cCceeeEeccceeE-EEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHH
Q 011669 394 LKDK-YGIIGDVRGRGFLL-GVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDA 466 (480)
Q Consensus 394 l~~~-~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~i 466 (480)
...+ .|.+......|.++ |+++..-.. ...++.+.|+ +.+|.+.+|..| .+++|++ +.++++-+
T Consensus 303 ~l~~~~P~v~v~~p~gTYL~WLD~r~l~l-------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L 373 (388)
T COG1168 303 FLNKHLPGVKVTEPQGTYLAWLDCRELGL-------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAIL 373 (388)
T ss_pred HHHhhCCCcEEecCCCceeeeeeccccCC-------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHH
Confidence 4433 48888888898875 888754221 1234555554 447777766433 3789999 78999999
Q ss_pred HHHHHHHHHHHhh
Q 011669 467 DYLVDVMDYSLSK 479 (480)
Q Consensus 467 d~~l~~l~~~l~~ 479 (480)
++++++|.++++.
T Consensus 374 ~eal~ri~~al~~ 386 (388)
T COG1168 374 EEALERLKRALKK 386 (388)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999875
No 178
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=209.45 Aligned_cols=322 Identities=14% Similarity=0.145 Sum_probs=212.4
Q ss_pred eeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC---CCCCEEEE
Q 011669 87 DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP---GNLKVVFF 163 (480)
Q Consensus 87 ~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~---~~~~~v~f 163 (480)
+++|.+-+...|+..+|+..|... +| .+|.+++++.+.+... ....|+.+...+|++++++.+. .+.++|++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~~~--~~-~p~~~~~~~~~~~~~~--~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~i 81 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNENP--FP-FPEDLVDEVFRRLNSD--TLRIYYDSPDEELIEKILSYLDTDFLSKNNVSV 81 (335)
T ss_pred hhccCcCCCCCCCceeEecCCCCC--CC-CCHHHHHHHHHHhhhh--hhhcCCCCChHHHHHHHHHHhCCCCCCcceEEE
Confidence 456666667788999999887654 44 4688999998876532 1133555567889999998886 55789999
Q ss_pred eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHH
Q 011669 164 TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV 243 (480)
Q Consensus 164 ~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~l 243 (480)
|+|++|++..+++.. +.|++.+++|.++...+.... ...+.+|... .+..+ +.
T Consensus 82 t~Ga~~~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~g-------------~~~~~v~~~~--~~~~~------~~ 134 (335)
T PRK14808 82 GNGADEIIYVMMLMF------DRSVFFPPTYSCYRIFAKAVG-------------AKFLEVPLTK--DLRIP------EV 134 (335)
T ss_pred cCCHHHHHHHHHHHh------CcEEECCCCHHHHHHHHHHcC-------------CeEEEecCCC--cCCCC------hh
Confidence 999999999998754 469999999987766655443 2333333211 11111 11
Q ss_pred HHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcceeee
Q 011669 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTM 322 (480)
Q Consensus 244 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~ 322 (480)
.+. .++++++...+|++|.+.. .+++.+++ ++++++|+||+|..|. +..... .+......-+.+|
T Consensus 135 --~~~-----~~~~i~i~nP~NPTG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~vi~~~S~ 200 (335)
T PRK14808 135 --NVG-----EGDVVFIPNPNNPTGHVFE----REEIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKYENLAVIRTF 200 (335)
T ss_pred --Hcc-----CCCEEEEeCCCCCCCCCcC----HHHHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhCCCEEEEEec
Confidence 111 2355556556667777664 44555666 5899999999999883 212211 1222223334489
Q ss_pred ccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 323 AKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 323 sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
||.++ .|+|+||+++++++++.+.... .+++.+.+++.++.++++.. +.+.++.+...+. ++.+.+...+++ +
T Consensus 201 SK~~~l~GlRvG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~g-~ 274 (335)
T PRK14808 201 SKAFSLAAQRIGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHR--EIFEERTKFIVEE-RERMKSALREMG-Y 274 (335)
T ss_pred hhhccCcccceEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHH-HHHHHHHHHHCC-C
Confidence 99999 8999999999999998886543 34677788888888887632 2222222222222 333433333344 3
Q ss_pred eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
....+.|.|+|+.+... ...++.+.|.++||++... .+++||+ ..+.+++++++++|++
T Consensus 275 ~~~~~~g~f~~~~l~~~---------~~~~~~~~l~~~Gi~V~~~---~~~~Ris---i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 275 RITDSRGNFVFIFMEKE---------EKERLLEHLRAKNIAVRSF---REGVRIT---IGKREENDMILKELEV 333 (335)
T ss_pred EECCCCCeEEEEeCCCc---------cHHHHHHHHHHCCeEEEEC---CCCeEEe---cCCHHHHHHHHHHHHh
Confidence 33456788999887321 1356888899999999853 4689999 5578999999999975
No 179
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=7.9e-24 Score=210.69 Aligned_cols=305 Identities=21% Similarity=0.231 Sum_probs=204.8
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
...+||..|.... +.| +.++ .... ...|+++...++++.++++++.+.+++++++|+++++..+.++.
T Consensus 17 ~~~~~~~~~~~~~----~~~-~~~~---~~~~----~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l 84 (330)
T TIGR01140 17 EDWLDFSTGINPL----GPP-VPPI---PASA----WARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL 84 (330)
T ss_pred hheeEccccCCCC----CCC-hhhc---chHH----HhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh
Confidence 3568888887432 224 2222 1111 12345555689999999999766788999999999999865542
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
.++ +|++.+++|+.+...... .|+....++ | .+++++.++. ..+++
T Consensus 85 ---~~g-~vl~~~p~y~~~~~~~~~-------------~g~~~~~~~---------d----~~~l~~~~~~----~~~v~ 130 (330)
T TIGR01140 85 ---APG-RVLVLAPTYSEYARAWRA-------------AGHEVVELP---------D----LDRLPAALEE----LDVLV 130 (330)
T ss_pred ---CCC-eEEEeCCCcHHHHHHHHH-------------cCCEEEEeC---------C----HHHHHhhccc----CCEEE
Confidence 244 799999999876543321 144444443 1 4667766631 22444
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee---eeccccc-cCccccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGA 334 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~pig~ 334 (480)
++.| +|++|.+ ++.+.+++|.++|++||+++|+||+|.+|.... ..... .+..++++ +|||.+| .|+|+||
T Consensus 131 i~~p-~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~--~~~~~~~i~~~S~SK~~g~~G~R~G~ 205 (330)
T TIGR01140 131 LCNP-NNPTGRL-IPPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAPQ--AARFPGLVVLRSLTKFFGLAGLRLGF 205 (330)
T ss_pred EeCC-CCCCCCC-CCHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhhH--hccCCCEEEEEecchhhcCchhhhhh
Confidence 5555 6677766 488899999999999999999999998875432 22211 11122333 8999999 8999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+.... ..++.++++++++.+.|+ +.++.++.++..+..++.+.+..++++.+....+.|+|+|+.
T Consensus 206 i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~ 280 (330)
T TIGR01140 206 VVAHPALLARLREAL--GPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVR 280 (330)
T ss_pred eeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEE
Confidence 999999988887543 356677888887777765 445555555555666666666655666444445678888887
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCC----CEEEEeCCCCCCHHHHHHHHHHH
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG----NVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~----~~iRi~p~~~~t~~~id~~l~~l 473 (480)
+.. ..++.+.|+++||.+.++..++ +++||+. ....++ +.++.+|
T Consensus 281 ~~~-----------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~-~~~~~~l 329 (330)
T TIGR01140 281 TPD-----------AAALHEALARRGILIRDFDNFPGLDPRYLRFAL--PTDEEN-DRLEEAL 329 (330)
T ss_pred cCC-----------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe--cCHHHH-HHHHHhh
Confidence 631 3568899999999999986542 6899994 444444 7777765
No 180
>PRK09265 aminotransferase AlaT; Validated
Probab=99.93 E-value=1.8e-23 Score=214.03 Aligned_cols=345 Identities=14% Similarity=0.109 Sum_probs=212.7
Q ss_pred CCCCEEEeccCCcccccCCC-CCHHHHHHHHHHHHhccccccccC-ChHHHHHHHHHHHhC------CCCCCEEEEeCCH
Q 011669 96 ENGRRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRIQHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSG 167 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~l~e~L~~~~------~~~~~~v~f~~sG 167 (480)
..|+.++||..|... .++. .++++.+++.+.+... ..|. .....+|++.+++.+ +.+.++|++++|+
T Consensus 30 ~~~~~~i~l~~g~p~-~~~~~~~~~i~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~ 104 (404)
T PRK09265 30 EEGHKILKLNIGNPA-PFGFEAPDEILRDVIRNLPTA----QGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGV 104 (404)
T ss_pred HcCCCeEEecCCCCC-cCCCCCCHHHHHHHHHHhhcC----CCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCCh
Confidence 356688999887654 3444 4678988888766532 1233 223456777777765 4556789999999
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++++..+++... .+++.|++.+++|..+....... |...+.++......|..| .+++++.+
T Consensus 105 ~~~l~~~~~~~~--~~gd~Vlv~~p~y~~~~~~~~~~-------------g~~~v~~~~~~~~~~~~d----~~~l~~~~ 165 (404)
T PRK09265 105 SELIVMAMQALL--NNGDEVLVPAPDYPLWTAAVSLS-------------GGKPVHYLCDEEAGWFPD----LDDIRSKI 165 (404)
T ss_pred HHHHHHHHHHhC--CCCCEEEEeCCCCcChHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHhc
Confidence 999999988653 36788999999997655443222 222222211111122223 46677666
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-C--CCcceeeecc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-G--VVPDIVTMAK 324 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~--~~pDivt~sK 324 (480)
+ .+++++++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|-+.+......... . ...-+-+|||
T Consensus 166 ~----~~~~~v~l~~P~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 240 (404)
T PRK09265 166 T----PRTKAIVIINPNNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSK 240 (404)
T ss_pred c----ccceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchh
Confidence 4 2455555444567788764 77889999999999999999999999875444211111111 1 1122346899
Q ss_pred ccc-cCcccccccc--CHH----HHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh-hHHHH---HHHHHHHHHHHHHHH
Q 011669 325 GIG-NGIPLGAVVT--TPE----IAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQN---NAHVVGSYLKERLTA 393 (480)
Q Consensus 325 ~~g-~G~pig~v~~--~~~----~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~---~~~~~~~~l~~~L~~ 393 (480)
.++ .|+|+||+++ +++ +++.+... ...+++.|.+++.++.++|...+. +.+.+ ++.+.. +.+.+
T Consensus 241 ~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r----~~~~~ 315 (404)
T PRK09265 241 AYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQR----DRAWE 315 (404)
T ss_pred hccCcccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHH----HHHHH
Confidence 996 7999999995 443 33333211 123566788888888888742111 11221 222223 33333
Q ss_pred hHHhcCceeeE-eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHH
Q 011669 394 LKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 394 l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~ 468 (480)
..++++.+... ...|+++|+.+..... +.......+.+.|.++||++.++..| .+++||+. ..+++++++
T Consensus 316 ~L~~~~~~~~~~p~~g~~l~~~~~~~~~---~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~ 390 (404)
T PRK09265 316 LLNAIPGVSCVKPKGALYAFPKLDPKVY---PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEE 390 (404)
T ss_pred HHhcCCCCcccCCCcceEEEEEeccccc---CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHH
Confidence 33334333323 3447788888743210 00012345677888999999987544 36899995 578999999
Q ss_pred HHHHHHHHHhh
Q 011669 469 LVDVMDYSLSK 479 (480)
Q Consensus 469 ~l~~l~~~l~~ 479 (480)
++++|.++++.
T Consensus 391 ~l~rl~~~l~~ 401 (404)
T PRK09265 391 AIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 181
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=2.1e-24 Score=208.16 Aligned_cols=335 Identities=16% Similarity=0.152 Sum_probs=223.3
Q ss_pred CCHHHHHHHHHHHHhc-cc--cccccCChHHHHHHHHHHHhCCC---CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 116 CHPYVVDSIVNQIKRI-QH--STVLYLNHAIADFAEALASKMPG---NLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~-~~--~~~~~~~~~~~~l~e~L~~~~~~---~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
.+.-|.+++++.+... .| +.+.+..+....|++++++.++. ..++|++|+++.||+..++..... .++.||+
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--~GDeVii 122 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--PGDEVIV 122 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--CCCEEEE
Confidence 4556788888877664 22 22334456667788888885542 356899999999999998887655 7899999
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
++|.|..+........+.+.+...-+..|- .+...|..| .+++|..+. +++++|+++..+|++|.
T Consensus 123 ~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~-------~~s~~~~~D----~~~le~~~t----~kTk~Ii~ntPhNPtGk 187 (420)
T KOG0257|consen 123 FEPFFDCYIPQVVMAGGTPVFVPLKPKEGN-------VSSSDWTLD----PEELESKIT----EKTKAIILNTPHNPTGK 187 (420)
T ss_pred ecCcchhhhhHHhhcCCcceeecccccccc-------ccCccccCC----hHHHHhhcc----CCccEEEEeCCCCCcCc
Confidence 999999998888877765433222111111 122334445 578888886 36788888888888887
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc----ccCCCcceeeeccccc-cCccccccccCHHHHHh
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE----AHGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEV 344 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~----~~~~~pDivt~sK~~g-~G~pig~v~~~~~~~~~ 344 (480)
+ .+++.|++|++||++||+++|+||||.-+..+|.++..+. .++.+..+.++||.+| .|||+||+++++.++..
T Consensus 188 v-fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~ 266 (420)
T KOG0257|consen 188 V-FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSA 266 (420)
T ss_pred c-cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhh
Confidence 7 4899999999999999999999999998877774222221 1234555668999999 79999999998888877
Q ss_pred hcCCCccccCCCcHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 345 LTRRNYFNTFGGNPVCTAAGHAVLKVIQ----------KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 345 l~~~~~~~t~~~~~~~~aaa~a~L~~i~----------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+........|..+...+.|..+++..-. .+++....++.++.+.+.|.++ +........+.++|.+
T Consensus 267 ~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~ad 342 (420)
T KOG0257|consen 267 LFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWAD 342 (420)
T ss_pred HHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEe
Confidence 7766555666666666666666654322 0124445556666666666665 3222233345567888
Q ss_pred EecCCCcCCCCH----HHHHHHHH-HHHHcCceeeccCcCC---------CEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 415 FVTDRQLKTPAK----AETLYIMD-KMKEMGVLVGKGGFYG---------NVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 415 ~~~~~~~~~~~~----~~~~~~~~-~l~~~Gv~v~~~~~~~---------~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+.....-..+.. ...-.+.+ .+.+.|+.+.|+..|+ +.+|++ ++-+++.++.++++|+
T Consensus 343 fs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~--~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 343 FSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFC--FCKADETLRKAIERLK 414 (420)
T ss_pred ccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHH--HHhhHHHHHHHHHHHh
Confidence 862211100100 01122334 4557799888865432 467777 7888899999999887
No 182
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.93 E-value=7.7e-24 Score=217.01 Aligned_cols=343 Identities=14% Similarity=0.089 Sum_probs=206.3
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc--ccccc-CChHHHHHHHHHHHhC------CCCCCEEEEeCCHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSGT 168 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~-~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGs 168 (480)
|..++|+..|.... + .+|.+.+++.+.+.+... ....| +.....+|++++++++ +.+.++|++|+|++
T Consensus 33 ~~~~i~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGDVTQ--P-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcCCCC--C-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 55678888877654 2 468899999988775321 11123 3444556666666653 45678999999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe--eEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
+++...+.+ ..+++.|++.+|+|.++...+........ . . ..|. ..+++|......|..| ++
T Consensus 110 ~al~~l~~~---~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~--~-~~~~~~~~~~v~~~~~~~~~~d-------~~-- 173 (409)
T PRK07590 110 CDTGNILDI---FGPDNTIAVTDPVYPVYVDTNVMAGRTGE-A--N-EDGRYSGIVYLPCTAENNFVPE-------LP-- 173 (409)
T ss_pred HHHHHHHHh---cCCCCEEEEeCCCCcchHHHHHHcCCccc-c--c-ccccccceeEeecccccCCccc-------Cc--
Confidence 999875432 34778999999999887655444332100 0 0 0000 0122221111112111 11
Q ss_pred HHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc----CCCcceeee
Q 011669 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH----GVVPDIVTM 322 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~----~~~pDivt~ 322 (480)
..++++|++...||++|.+. +.+.+++|.++|++||++||+||+|..|-..+.....+... +....+-||
T Consensus 174 -----~~~~k~i~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 -----EEKVDIIYLCFPNNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred -----ccCceEEEEeCCCCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence 12455555545577778764 88899999999999999999999999885444111111111 122334489
Q ss_pred ccccc-cCccccccccCHHHHHhhc-----------CCCccccC-CCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 011669 323 AKGIG-NGIPLGAVVTTPEIAEVLT-----------RRNYFNTF-GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE 389 (480)
Q Consensus 323 sK~~g-~G~pig~v~~~~~~~~~l~-----------~~~~~~t~-~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~ 389 (480)
||.++ .|+|+||+++++++++.+. ......++ +.+.+++.++.++|+.- .+.+.+++++.-+..++
T Consensus 248 SK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~ 326 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE-GKAQIKELIDYYMENAK 326 (409)
T ss_pred ccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHH
Confidence 99998 8999999999999886321 01112233 46778888887777421 12233333322222233
Q ss_pred HHHHhHHhcCceeeEec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCH
Q 011669 390 RLTALKDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTK 463 (480)
Q Consensus 390 ~L~~l~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~ 463 (480)
.+.+..+.++ +....+ .|+++|+++... .....+++.|+ +.||++.++..| .+++||+ +..++
T Consensus 327 ~l~~~L~~~~-~~~~~~~g~~f~wi~~~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~ 395 (409)
T PRK07590 327 IIREGLESAG-FEVYGGVNAPYIWVKTPDG--------MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSR 395 (409)
T ss_pred HHHHHHHhcC-CceecCCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCH
Confidence 3333333333 222333 467889987421 11345666665 579999987543 3589999 46789
Q ss_pred HHHHHHHHHHHHHH
Q 011669 464 EDADYLVDVMDYSL 477 (480)
Q Consensus 464 ~~id~~l~~l~~~l 477 (480)
+++++++++|.+++
T Consensus 396 ~~l~~~l~rl~~~~ 409 (409)
T PRK07590 396 ENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998753
No 183
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.7e-23 Score=210.30 Aligned_cols=328 Identities=16% Similarity=0.124 Sum_probs=211.8
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ 177 (480)
+..++||..|... +| .+|.+.+++.+..... ..|.+..-.+|++.++++++.+.++|++++|+++++..++..
T Consensus 35 ~~~~i~l~~~~~~--~~-~~~~~~~al~~~~~~~----~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 35 VPRIAKLGSNENP--LG-PSPAVRRAFADIAELL----RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRA 107 (371)
T ss_pred CcceEEcCCCCCC--CC-CCHHHHHHHHHHHHHh----hcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 4478999887654 45 5688998887654432 234433334899999999877778899999999999988876
Q ss_pred HHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEE
Q 011669 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (480)
Q Consensus 178 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~ 257 (480)
.. .+++.|++.+++|.+........ |+....++... .++-| .+++++.++. ++++
T Consensus 108 ~~--~~gd~vli~~P~y~~~~~~~~~~-------------g~~~~~v~~~~--~~~~~----~~~l~~~~~~----~~~~ 162 (371)
T PRK05166 108 VL--RPGDRVVTLYPSFPLHEDYPTMM-------------GARVERVTVTP--DLGFD----LDALCAAVAR----APRM 162 (371)
T ss_pred hc--CCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEeecCC--CCCCC----HHHHHHhhhc----CCCE
Confidence 53 36788999999997654332211 33333332211 12223 5677777653 3455
Q ss_pred EEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-CCC---cceeeeccccc-cCccc
Q 011669 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVV---PDIVTMAKGIG-NGIPL 332 (480)
Q Consensus 258 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~~~---pDivt~sK~~g-~G~pi 332 (480)
|++...+|++|.+. +.+.+++|.++|++ ++++|+||+|..|...+......... ... .-+.||||.++ +|+|+
T Consensus 163 v~l~~p~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRi 240 (371)
T PRK05166 163 LMFSNPSNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRV 240 (371)
T ss_pred EEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhhe
Confidence 66655677788775 66777888888764 89999999998875322111111111 111 22337999999 89999
Q ss_pred ccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeE
Q 011669 333 GAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (480)
Q Consensus 333 g~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 411 (480)
||+++ ++++++.+.... ..++.|.+++.++.++|. .+++.++..+.....++.+.+..++++. ....+.|+++
T Consensus 241 G~~i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~p~~g~fl 314 (371)
T PRK05166 241 GYGLVSDPELVGLLDRVR--TPFNVNGAAQAAALAALD---DEEHLAKGVALALAERERLKKELAEMGY-RIAPSRANFL 314 (371)
T ss_pred eeeecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCcC-eeCCCcCCEE
Confidence 99775 688887775432 346678888888887775 2233333333333333334444444443 2345668888
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
|+.+.. ...++.+.|+++||.+.++..+ .+++||+.. +.++.+++++.|++++.
T Consensus 315 ~~~~~~----------~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 315 FFDARR----------PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred EEeCCC----------CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 887521 1356888899999999987432 578999943 67788888888887653
No 184
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.92 E-value=2.7e-23 Score=206.81 Aligned_cols=308 Identities=15% Similarity=0.073 Sum_probs=200.0
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA 178 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~a 178 (480)
..++|+.++. +++|...+.+.+ ..+. .|+.+. .+|++.|++++. .++|++|+|++||+..++.
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~-------~yp~~~-~~Lr~~ia~~~~--~~~I~it~Gs~~al~~~~~-- 82 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWA-------RLPETD-DGLEAAARAYYG--APQLLPVAGSQAAIQALPR-- 82 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHH-------hCCCCh-HHHHHHHHHHhC--CCCEEECcCHHHHHHHHHH--
Confidence 3578888886 344655444322 1222 234333 789999999985 4789999999999988753
Q ss_pred HhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 179 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 179 r~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
..+++.|++.+++|.+....+... |...+.+| .+++++.++ +....+
T Consensus 83 --~~~gd~v~v~~P~y~~~~~~~~~~-------------g~~~~~v~--------------~~~~~~~~~----~~~~v~ 129 (330)
T PRK05664 83 --LRAPGRVGVLSPCYAEHAHAWRRA-------------GHQVRELD--------------EAEVEAALD----SLDVLV 129 (330)
T ss_pred --ccCCCEEEEcCCChHHHHHHHHHc-------------CCeEEEec--------------hhhHhhhhc----CCCEEE
Confidence 136788999999998776554433 33333332 134555553 122467
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cCcccccccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAVVT 337 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v~~ 337 (480)
+++|. |++|.+. +.+.+++|.++|+++|+++|+||+|.++.... ........+...-+-||||.+| .|+|+||+++
T Consensus 130 l~nP~-NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~-s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~ 206 (330)
T PRK05664 130 VVNPN-NPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQH-SLAACAHRPGLIVLRSFGKFFGLAGARLGFVLA 206 (330)
T ss_pred EeCCc-CCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCcc-cccccccCCCEEEEeeccccccCCCcceEEEEe
Confidence 77775 6677664 78889999999999999999999998774222 2222221111222448999999 8999999999
Q ss_pred CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEec
Q 011669 338 TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417 (480)
Q Consensus 338 ~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~ 417 (480)
++++++.+.... .+++.+.+++.++.++|+.. .+.++.++.....++.+.+..++++. ....+.++++|+.+.
T Consensus 207 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~L~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~~~~~f~~~~~~- 279 (330)
T PRK05664 207 EPALLRALAELL--GPWTVSGPTRWLAQAALADT---PWQRRQRERLLAASQRLAALLRRHGL-TPAGGCALFQWVRTE- 279 (330)
T ss_pred CHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCh---HHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCcceEEEEecC-
Confidence 999988876543 34566788888888888632 22233333333333334333333432 112233366666541
Q ss_pred CCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
....+.+.|.++||++...+ ..+++||+.. .+++++++++++|++..++
T Consensus 280 ----------~~~~~~~~l~~~gi~v~~f~-~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 ----------DAAALHEFLARRGILTRLFE-QPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred ----------CHHHHHHHHHHCCeEEEECC-CCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 14677888999999998643 3578999943 4788899999999887654
No 185
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=1.9e-23 Score=210.82 Aligned_cols=341 Identities=16% Similarity=0.162 Sum_probs=213.3
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHH--hccccccccC-ChHHHHHHHHHHHhCC------CCCC-EEEEeCCHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIK--RIQHSTVLYL-NHAIADFAEALASKMP------GNLK-VVFFTNSGTE 169 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~--~~~~~~~~~~-~~~~~~l~e~L~~~~~------~~~~-~v~f~~sGse 169 (480)
++|||.+|.... +++||.+.+++.+..+ ........|. .....+|++.+++++. .+.+ .|+++++..+
T Consensus 2 ~~I~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLL--LSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSS--TTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCCC--cccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 478888776554 4456666665555443 1112223444 3458889999998875 4456 6777766666
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
++..++.+.+ ..+++.|++.+++|.+....+... |...+++|......|..| .++|++.+++
T Consensus 80 ~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~d----~~~l~~~l~~ 141 (363)
T PF00155_consen 80 ALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLL-------------GAEVIPVPLDSENDFHLD----PEALEEALDE 141 (363)
T ss_dssp HHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHT-------------TSEEEEEEEEETTTTEET----HHHHHHHHHT
T ss_pred chhhhhhccc-ccccccceecCCcccccccccccc-------------Cceeeecccccccccccc----cccccccccc
Confidence 6666655543 336788999999997765444332 222333331111223334 6778888875
Q ss_pred cCCC--ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcc---eeeec
Q 011669 250 GTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPD---IVTMA 323 (480)
Q Consensus 250 ~~~~--~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pD---ivt~s 323 (480)
...+ ++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|.++......++. ....+..++ +-++|
T Consensus 142 ~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 220 (363)
T PF00155_consen 142 LPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLS 220 (363)
T ss_dssp SHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEEST
T ss_pred ccccccccceeeeccccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecc
Confidence 3222 356777777788888764 8888999999999999999999999987544311111 111222223 33789
Q ss_pred cccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 324 KGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 324 K~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
|.+| .|+|+||+++++++++.+..... .+..+.+.+.++.+.+..... +++.++.++.-+..++.+.+..++.+..
T Consensus 221 K~~g~~GlRvG~i~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 298 (363)
T PF00155_consen 221 KSFGLPGLRVGYIVAPPELIERLRRFQR--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGIT 298 (363)
T ss_dssp TTTTSGGGTEEEEEEEHHHHHHHHHHHH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred ccccccccccccccchhhhhhhhhhccc--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhh
Confidence 9999 79999999999999988875432 333366777777766653321 1122333333333333333333333433
Q ss_pred eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
......|.++|+.+... ....+.+.|+++ ||.+.++..+ .+++||+. ..++++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDPN---------DAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESHH---------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEcccc---------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 33333577777776321 356788888888 9999987443 47899996 479999999999986
No 186
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.2e-22 Score=184.48 Aligned_cols=359 Identities=17% Similarity=0.168 Sum_probs=242.0
Q ss_pred HHHHHHHHhhhcCCcc-----ccccCCCeEEEeeeccEEEeCCC--CEEEeccCCcccccCCC-CCHHHHHHHHHHHHhc
Q 011669 60 ADEILAKRKTFLSPSL-----FHLYSKPLNVVDGKMQYLFDENG--RRYLDAFGGIATVCCGH-CHPYVVDSIVNQIKRI 131 (480)
Q Consensus 60 ~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~g~G~~l~d~dG--~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~ 131 (480)
.++.+.+.+.++.... ...|+.-.++.+.+|..+. ++| +.+|.|+++.+ ||- +||+|.+|..++++++
T Consensus 22 ~q~~~~q~r~~l~~~legi~gagtwk~erVi~s~q~p~i~-v~G~~k~ilnFcaNnY---LGLsshPeii~a~~~aleey 97 (417)
T KOG1359|consen 22 AQEAIAQLRAILGDELEGIKGAGTWKRERVITSRQGPTIQ-VKGSDKKILNFCANNY---LGLSSHPEIINAGQKALEEY 97 (417)
T ss_pred hHHHHHHHHHhccCccceecccccceeeeEEeecccceEE-Eeccccceeeeccccc---ccccCChHHHHHHHHHHHHh
Confidence 3455566565554322 1235667889999999874 555 68999987754 344 5899999999999986
Q ss_pred ccccc-----ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccccccccccc
Q 011669 132 QHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATA 206 (480)
Q Consensus 132 ~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~ 206 (480)
+.... .++......|..+|+++.. -+..++..|+-.||..++..... +.+- |..+--.|......+.+..
T Consensus 98 GaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~feail~--pedA-vfSDeLNhASIIdGirLck 172 (417)
T KOG1359|consen 98 GAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAFEAILT--PEDA-VFSDELNHASIIDGIRLCK 172 (417)
T ss_pred CCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHHHHhcC--hhhh-hhccccccchhhhhhHHHh
Confidence 53221 3456777889999999874 46678999999999998876532 4333 3334455555544444332
Q ss_pred CCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH
Q 011669 207 QSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286 (480)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~ 286 (480)
+ |+. -| ..+++.-+....+-+.+.|..+.+.++.|.+.| |++|.+|++|
T Consensus 173 ----r----------------y~h---~d----v~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~k 221 (417)
T KOG1359|consen 173 ----R----------------YRH---VD----VFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKK 221 (417)
T ss_pred ----h----------------hcc---ch----hHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHh
Confidence 0 110 12 233443332222347889999999999999998 9999999999
Q ss_pred hCCEEEEccccc-Cc-cccCCCcccccccCC--Cccee--eeccccccCccccccccCHHHHHhhcCCCccccCC--CcH
Q 011669 287 AGGLCIADEVQA-GF-ARTGSHFWGFEAHGV--VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG--GNP 358 (480)
Q Consensus 287 ~gillI~DEv~t-gf-gr~G~~~~~~~~~~~--~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~--~~~ 358 (480)
||.++++||.+. || |.+| . ..-+.+++ .+|++ |++|++||. --||..++.++++.++++...+-|+ -+|
T Consensus 222 YgaLlfiDecHaTgf~G~tG-r-Gt~E~~~vm~~vdiinsTLgKAlGga-~GGyttgp~~li~llrqr~RpylFSnslpp 298 (417)
T KOG1359|consen 222 YGALLFIDECHATGFFGETG-R-GTAEEFGVMGDVDIINSTLGKALGGA-SGGYTTGPKPLISLLRQRSRPYLFSNSLPP 298 (417)
T ss_pred cCcEEEEeecccceeecCCC-C-ChHHHhCCCCcceehhhhhhhhhcCC-CCCCccCChhHHHHHHhcCCceeecCCCCh
Confidence 999999999984 43 5555 2 12345564 56666 899999841 1278999999999888765444443 344
Q ss_pred HHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCC----CCHHHHHHHH
Q 011669 359 VCTAAGHAVLKVIQ-KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT----PAKAETLYIM 433 (480)
Q Consensus 359 ~~~aaa~a~L~~i~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~----~~~~~~~~~~ 433 (480)
.....+.++++.+. ......+.+.+.+++++.++.. ++.+.....+.. -+...+..+.
T Consensus 299 avV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-----------------GftIsg~~hPI~pv~lGda~lA~~~a 361 (417)
T KOG1359|consen 299 AVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-----------------GFTISGASHPICPVMLGDARLASKMA 361 (417)
T ss_pred hhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-----------------CceecCCCCCccceecccHHHHHHHH
Confidence 44555566666554 4567778888888888887664 111211111111 1345678899
Q ss_pred HHHHHcCceeeccC-----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 434 DKMKEMGVLVGKGG-----FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 434 ~~l~~~Gv~v~~~~-----~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.|+++|+++..-. .....||+..+..+|+||||++++++.++.+
T Consensus 362 d~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 362 DELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred HHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 99999999985321 1246799999999999999999999998765
No 187
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=7.7e-23 Score=223.80 Aligned_cols=355 Identities=9% Similarity=0.053 Sum_probs=220.4
Q ss_pred EEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC---EEEEeCCHHH
Q 011669 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK---VVFFTNSGTE 169 (480)
Q Consensus 93 l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~---~v~f~~sGse 169 (480)
+.+.+|..+|++..|.... + .+|.|.+++.+.+.+..+ ..+..+...++++++++.++.+.+ +|++++|+++
T Consensus 691 ~~~~~g~~vI~LsinE~d~--p-pPp~V~eAi~eal~~~~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 691 VSGSQESSLIHMDVDESFL--P-VPSAVKASIFESFVRQNI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CcccCCCCEEEEeCCCCCC--C-CCHHHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 4566788899998887654 4 678999999887765422 122345678899999998765443 7999999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
++..+++.... +++.|++..|+|..+...+... |...+.+|......|..| .++++++++.
T Consensus 766 lL~lll~aLl~--pGD~VLVp~PtY~~Y~~~a~~~-------------Ga~vv~Vpl~~e~gf~lD----~d~Le~al~~ 826 (1082)
T PLN02672 766 LFNKLVLCCVQ--EGGTLCFPAGSNGTYVSAAKFL-------------KANFRRIPTKSSDGFKLT----AKTLASTLET 826 (1082)
T ss_pred HHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHc-------------CCEEEEEecccccCCCCC----HHHHHHHhcc
Confidence 99888876544 6789999999998776655433 233333332212234334 5677777752
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC--ccccc----cc-C-----CCc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH--FWGFE----AH-G-----VVP 317 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~--~~~~~----~~-~-----~~p 317 (480)
. ...+.++++|.+|++|.+ ++++.+++|.++|++||+++|+||+|.++-+.+.. .+.+. .+ . ...
T Consensus 827 ~--~~~~I~L~nPnhNPTG~v-~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVI 903 (1082)
T PLN02672 827 V--KKPWVYISGPTINPTGLL-YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVA 903 (1082)
T ss_pred C--CCCEEEEECcCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEE
Confidence 1 234678888876778876 58999999999999999999999999987665521 11111 11 1 011
Q ss_pred ceeeeccccc-cCccccccccCH-HHHHhhcCCCccc-cCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---HHHHH
Q 011669 318 DIVTMAKGIG-NGIPLGAVVTTP-EIAEVLTRRNYFN-TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSY---LKERL 391 (480)
Q Consensus 318 Divt~sK~~g-~G~pig~v~~~~-~~~~~l~~~~~~~-t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~---l~~~L 391 (480)
-+-+|||.++ +|+|+||+++++ ++++.+....... .+..+.+++++++++++. +...+.+++++..+. .++.+
T Consensus 904 vL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L 982 (1082)
T PLN02672 904 LLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERL 982 (1082)
T ss_pred EEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHH
Confidence 2237899999 699999999964 4888776432111 122233333333333310 122333333333222 22233
Q ss_pred HHhHHhcCceeeEecc-ceeEEEEEecCCC--c--CCCC-----HHHHHHHHHHHHHc-CceeeccCcC--CCEEEEeCC
Q 011669 392 TALKDKYGIIGDVRGR-GFLLGVEFVTDRQ--L--KTPA-----KAETLYIMDKMKEM-GVLVGKGGFY--GNVFRITPP 458 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~-g~~~~i~~~~~~~--~--~~~~-----~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~p~ 458 (480)
.+..+++++ ...++. |+++|+.+..-.. . ..+. ......+++.|+++ ||.+.||..+ .+++||+
T Consensus 983 ~e~L~~~Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIs-- 1059 (1082)
T PLN02672 983 KETLEACGW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFS-- 1059 (1082)
T ss_pred HHHHHHCCC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEE--
Confidence 333333443 334444 5556665421000 0 0000 11246688888765 9999998543 3789999
Q ss_pred CCCCHHHHHHHHHHHHHHHh
Q 011669 459 LCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 459 ~~~t~~~id~~l~~l~~~l~ 478 (480)
++.+++++++++++|.+...
T Consensus 1060 fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1060 FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ecCCHHHHHHHHHHHHHHHH
Confidence 55789999999999998654
No 188
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=4e-23 Score=205.84 Aligned_cols=286 Identities=14% Similarity=0.095 Sum_probs=188.2
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
..|+.+...+|+++|++.+....++|++|+|++|++..++++ . .+ ++|++.+|+|..+...+...
T Consensus 35 ~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~--~~-~~vv~~~P~y~~y~~~~~~~----------- 99 (332)
T PRK06425 35 SIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-I--NV-GNIIIVEPNFNEYKGYAFTH----------- 99 (332)
T ss_pred ccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-h--CC-CcEEEeCCChHHHHHHHHHc-----------
Confidence 457778889999999999988888999999999999998863 2 23 46888899998776665444
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|...+.+|.. .++.| .+. ++. .++++|++...||++|.+. +.+.+++|.++|++||+++|+||
T Consensus 100 --G~~v~~vp~~---~~~~~----~~~----l~~---~~~k~v~l~nP~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~DE 162 (332)
T PRK06425 100 --GIRISALPFN---LINNN----PEI----LNN---YNFDLIFIVSPDNPLGNLI-SRDSLLTISEICRKKGALLFIDE 162 (332)
T ss_pred --CCeEEEEeCC---cccCc----HHH----Hhh---cCCCEEEEeCCCCCcCCcc-CHHHHHHHHHHHHHcCCEEEEec
Confidence 3333333321 01112 122 221 1444555545567777764 88889999999999999999999
Q ss_pred cccCccccCC-Ccccc-cccCCCcceeeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh
Q 011669 296 VQAGFARTGS-HFWGF-EAHGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (480)
Q Consensus 296 v~tgfgr~G~-~~~~~-~~~~~~pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~ 372 (480)
+|..|...+. ..... +..+...-+-||||.++ +|+|+||+++++++++.+.... ..+..+.+++.+ +....
T Consensus 163 ~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~--~~~~~~~~~~~~----l~~~~ 236 (332)
T PRK06425 163 AFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKIT--EPWSVCDPAIDF----IRSID 236 (332)
T ss_pred chhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcC--CCCccCHHHHHH----HHHhh
Confidence 9998854331 11111 11122233448999999 9999999999999998877533 234344443222 22112
Q ss_pred hhHH----HHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc
Q 011669 373 KDKL----QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448 (480)
Q Consensus 373 ~~~~----~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~ 448 (480)
.+.+ .+.+++..+++.+.|+ +++......+.|.++|+.+. ...++.+.|+++||.+.++..
T Consensus 237 ~~~~~~~~~~~~~~~r~~l~~~L~----~~g~~~~~~~~g~f~~~~~~-----------~~~~~~~~l~~~gi~v~~~~~ 301 (332)
T PRK06425 237 LDYVAKHSLDIMENERSYLINNLE----AMGFRAAGDPSANFITFMIP-----------DAHDFYSYLLKNGILVRLLDD 301 (332)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH----HCCCEECCCCCceEEEEEcC-----------CHHHHHHHHHHCCeEEEECCC
Confidence 2222 3333344444444443 33322112457888888762 145688889999999999865
Q ss_pred C----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 449 Y----GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 449 ~----~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+ .+++||+ ..+.++++.++++|++++
T Consensus 302 f~~~~~~~iRis---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 302 YECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 4 3689999 457899999999999876
No 189
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.92 E-value=3.3e-23 Score=211.85 Aligned_cols=342 Identities=14% Similarity=0.104 Sum_probs=207.0
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc--ccccc-CChHHHHHHHHHHHhC---CCCCCEEEEeCCHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH--STVLY-LNHAIADFAEALASKM---PGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~-~~~~~~~l~e~L~~~~---~~~~~~v~f~~sGseA~ 171 (480)
|..++|+..|.... + ..|.|.+++.+.+.+... ....| +.....+|++++++.+ ..+.++|++|+|+++++
T Consensus 32 ~~~~i~l~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDTTQ--P-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCCCC--C-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 56788988876543 2 468899999887775421 11223 3455677777777754 34568899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe-eEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~-~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
.....+ ..+++.|++.+|+|.++...+.......... ....+ ..+++|......|..| ++ +
T Consensus 109 ~~l~~l---~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~---~~~~~~~~~~v~~~~~~~~~~~-------~~---~-- 170 (402)
T TIGR03542 109 FRLQSL---FGSDNTVAVQDPVYPAYVDSNVMAGRAGVLD---DDGRYSKITYLPCTKENNFIPD-------LP---E-- 170 (402)
T ss_pred HHHHHh---cCCCCEEEEeCCCCcchHHHHHHcCCccccc---cccccceEEEeecchhhCCCCC-------cc---c--
Confidence 875432 2367889999999988766554433211000 00000 2222221111112111 11 1
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc---ccc-cCCCcceeeecccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG---FEA-HGVVPDIVTMAKGI 326 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~---~~~-~~~~pDivt~sK~~ 326 (480)
..++++|++...+|++|.+ .+.+.+++|.++|++||+++|+||+|..|...+..... .+. .+....+.+|||.+
T Consensus 171 -~~~~~~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTGTV-LTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -cCCceEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 1245666665667788876 58889999999999999999999999988543311111 111 12233345899999
Q ss_pred c-cCccccccccCHHHH--------HhhcCCCccccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHh
Q 011669 327 G-NGIPLGAVVTTPEIA--------EVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 327 g-~G~pig~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l 394 (480)
| .|+|+||++++++++ ..+.........+.+.+++.++.+.++.-..+ +..+.+++..+.+.+.|++
T Consensus 249 g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~- 327 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA- 327 (402)
T ss_pred CCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 8 899999999998876 22211111122246778888777766421111 1122233333334333333
Q ss_pred HHhcCceeeEec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccCcC----CCEEEEeCCCCCCHHHHHH
Q 011669 395 KDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGGFY----GNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 395 ~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~ 468 (480)
++ +....+ .|+++|+++... ....++.+.|+ +.||++.++..| .+++||+ +..+++++++
T Consensus 328 ---~~-~~~~~~~~~~f~~v~l~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~ 393 (402)
T TIGR03542 328 ---AG-FKVYGGEHAPYLWVKTPEG--------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVE 393 (402)
T ss_pred ---cC-ceecCCCceeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHH
Confidence 33 222333 467889987321 11345677766 579999997543 3689999 5568999999
Q ss_pred HHHHHHHHH
Q 011669 469 LVDVMDYSL 477 (480)
Q Consensus 469 ~l~~l~~~l 477 (480)
++++|.++|
T Consensus 394 ~l~~l~~~~ 402 (402)
T TIGR03542 394 ACERIKEAL 402 (402)
T ss_pred HHHHHHhhC
Confidence 999998753
No 190
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=6.9e-23 Score=204.22 Aligned_cols=303 Identities=10% Similarity=0.038 Sum_probs=199.6
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcC--C
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN--A 193 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~--~ 193 (480)
.||+|.+|..+.+++.+ +..+...+|.++|+++++.+.+++++++||++||..++..... +++.|+++.+ -
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~--~gd~Vli~~~d~p 106 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP--PGRKVVHYLPEKP 106 (346)
T ss_pred CChhHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC--CCCEEEECCCCCC
Confidence 57999999999988852 3568889999999999987668999999999999999986543 5677775422 2
Q ss_pred cccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 194 yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
+|........+.+ ...... ++ +++++. . .++++|++++ .++.|.+. +
T Consensus 107 ~~~s~~~~~~l~g------------a~~~~~---------~~----l~~l~~----~--~~~~lIiitg-~s~~G~v~-~ 153 (346)
T TIGR03576 107 AHPSIPRSCKLAG------------AEYFES---------DE----LSELKK----I--DGTSLVVITG-STMDLKVV-S 153 (346)
T ss_pred CchhHHHHHHHcC------------CEEecc---------CC----HHHHhh----C--cCceEEEEEC-CCCCCccc-C
Confidence 4443333332222 111111 12 223321 1 2456777776 36667664 5
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCcc--ccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCcc
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFA--RTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF 351 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfg--r~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~ 351 (480)
.+.|++|.++|++||+++|+||+|..+. ..| .. ....++...-+.||||++ +|+++||+++++++++.+......
T Consensus 154 ~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~-~~-~~~~~~~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~ 230 (346)
T TIGR03576 154 EEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG-QP-PALDLGADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQ 230 (346)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCccccccccCC-CC-CHHHcCCcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcC
Confidence 6779999999999999999999997431 112 11 111223222234789955 467999999999999988765544
Q ss_pred ccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHH
Q 011669 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLY 431 (480)
Q Consensus 352 ~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~ 431 (480)
..++.+++.++++.++|+.+..+...+.++++.+.+.+.++. +.. .+..+.|+++++... + ..+.
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~---~~~~~~f~~~~~~~~------~--~~~~ 295 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNV---ERTPTGFVIKGVEEE------K--LIEI 295 (346)
T ss_pred cccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCC---CcCCCeEEEEeCCCC------C--HHHH
Confidence 455578889999999998654444555555555555555543 221 122344666665211 0 1245
Q ss_pred HHHHHHHcCceeeccCcC---CCEEEEeCCCCCCHH---HHHHHHHHHHHHHh
Q 011669 432 IMDKMKEMGVLVGKGGFY---GNVFRITPPLCFTKE---DADYLVDVMDYSLS 478 (480)
Q Consensus 432 ~~~~l~~~Gv~v~~~~~~---~~~iRi~p~~~~t~~---~id~~l~~l~~~l~ 478 (480)
+.+.|.++||++.++..+ .+++||+ +...++ +++.++++|++.++
T Consensus 296 ~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 296 GLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred HHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHHHHhccC
Confidence 567778899999997543 5799999 444444 79999999998763
No 191
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=3.8e-22 Score=201.99 Aligned_cols=318 Identities=19% Similarity=0.156 Sum_probs=204.7
Q ss_pred CCCHHHHHHHHHHHHhccccccccC--ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc--CCceEEEE
Q 011669 115 HCHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--GCNDIISL 190 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~~~~~~~~~~--~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~--~~~~ii~~ 190 (480)
|.+|++++++.+++....+....++ .....+++++|++.++.+.+.++|++||+|||..+++.++... ++++|++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~ 110 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP 110 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence 7899999999998876422222232 2334689999999987655568899999999999999887642 45678888
Q ss_pred cCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcce
Q 011669 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGII 270 (480)
Q Consensus 191 ~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 270 (480)
++++..+...+ .. .|+....+|....+ ..| .+++++.++. ++++|++-..++++|.+
T Consensus 111 ~~~h~s~~~~~-~~------------~g~~~~~v~~~~~~--~~d----~~~l~~~i~~----~~~~vi~~~~~~~tG~~ 167 (371)
T PRK13520 111 ESAHFSFDKAA-DM------------LGVELRRAPLDDDY--RVD----VKAVEDLIDD----NTIGIVGIAGTTELGQV 167 (371)
T ss_pred CcchHHHHHHH-HH------------cCceEEEecCCCCC--cCC----HHHHHHHHhh----CCEEEEEEcCCcCCccc
Confidence 77765432221 11 12222222221111 123 6788888863 34445544445678888
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEcccccCccc--cCC-CcccccccCCCcceeee--ccccccCcccccccc-CHHHHHh
Q 011669 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR--TGS-HFWGFEAHGVVPDIVTM--AKGIGNGIPLGAVVT-TPEIAEV 344 (480)
Q Consensus 271 ~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr--~G~-~~~~~~~~~~~pDivt~--sK~~g~G~pig~v~~-~~~~~~~ 344 (480)
.+ +++|.++|++||+++|+||+|+++.. ... ..+.+... ..|.+++ .|...+|+|+|+++. ++++++.
T Consensus 168 ~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~ 241 (371)
T PRK13520 168 DP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDA 241 (371)
T ss_pred CC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHh
Confidence 76 99999999999999999999986531 110 11212112 3465554 365446789997775 5567666
Q ss_pred hcCCC-c---------cccCCCcHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeE
Q 011669 345 LTRRN-Y---------FNTFGGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (480)
Q Consensus 345 l~~~~-~---------~~t~~~~~~~~aaa~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 411 (480)
+.... . .+|. ++..++++.++|+.+.+++ ..++..++.+++++.|+++ .+.. .......++
T Consensus 242 l~~~~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~--~~~~~~~~v 315 (371)
T PRK13520 242 LAVDTPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER--GFEP--VIEPVLNIV 315 (371)
T ss_pred hcccCccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC--CCEE--ecCCCceEE
Confidence 54211 0 1122 3345777778888765543 5667777777777777664 2221 122334455
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.+. ...++.+.|.++||.+..+. ..+++||+++..+|++||+.+++.|++++++
T Consensus 316 ~~~~~-----------~~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 316 AFDDP-----------NPDEVREKLRERGWRVSVTR-CPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred EEecC-----------CHHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 55542 14578888999999998754 2468999887789999999999999998763
No 192
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.9e-22 Score=191.31 Aligned_cols=349 Identities=17% Similarity=0.135 Sum_probs=215.6
Q ss_pred CEEEeccCCcccccCC--CCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHHHHH
Q 011669 99 RRYLDAFGGIATVCCG--HCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEAN 171 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lG--h~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGseA~ 171 (480)
+.+|-+..|.+++ +| -..+++.+|+.+.+...- +....+......+.+|.|.+.++. ..+.|++|++.++|+
T Consensus 61 k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 4677666665554 11 134688889988886531 122222333444555555444443 246899999999999
Q ss_pred HHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 172 ~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
|.++.... .++..|+..+++|.-+..-+... +.+.-.+..-....|..| ++.+|.+++.
T Consensus 140 e~~i~~LA--~p~aNILlPrPGfp~Y~~~a~~~-------------~lEVR~ydlLPe~~weID----L~~veal~DE-- 198 (447)
T KOG0259|consen 140 ELAISSLA--NPGANILLPRPGFPLYDTRAIYS-------------GLEVRYYDLLPEKDWEID----LDGVEALADE-- 198 (447)
T ss_pred HHHHHHhc--CCCCceecCCCCCchHHHhhhhc-------------CceeEeecccCcccceec----hHHHHHhhcc--
Confidence 99998643 37889999999995333222211 222222221222344445 7788888863
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc-CCCccee--eeccccc-
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVVPDIV--TMAKGIG- 327 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~-~~~pDiv--t~sK~~g- 327 (480)
+.+|.||++|.|+.|++ ++.+-|++|.++|+|+|+++|+||||..+.+.+.++.....+ .+.|-+. .+||.+=
T Consensus 199 -NT~AivviNP~NPcGnV--ys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~V 275 (447)
T KOG0259|consen 199 -NTVAIVVINPNNPCGNV--YSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIV 275 (447)
T ss_pred -CeeEEEEeCCCCCCccc--ccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeeccccccccc
Confidence 46677777787776643 599999999999999999999999998876666444333333 3455444 4789887
Q ss_pred cCccccccccCHH--------HHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 328 NGIPLGAVVTTPE--------IAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 328 ~G~pig~v~~~~~--------~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
.|||+||++..+. +.+.+... ..-+-+.+.+-|+|.-.-|+.- .+++.+.....-+...+..-+..+..|
T Consensus 276 PGWRlGWi~~hD~~gvf~~~~~~q~~~~~-~~~~~~p~TiiQ~AlP~IL~kT-p~efF~k~~~~lk~na~l~y~~Lk~IP 353 (447)
T KOG0259|consen 276 PGWRLGWIALHDPRGVFRDTKVVQGIKNF-LDIIPGPATIIQGALPDILEKT-PEEFFDKKLSFLKSNADLCYSRLKDIP 353 (447)
T ss_pred CCceeeeEEEecccccccchHHHHHHHHH-HhccCCccHhHHHHhHHHHHhC-hHHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 7999999987432 22222211 1133445566666665555532 234444433333333333333334446
Q ss_pred cee-eEeccceeE-EEEEecCCCcCCCCHH-HHHHHHHHHHHcCceeeccCcCC--CEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 400 IIG-DVRGRGFLL-GVEFVTDRQLKTPAKA-ETLYIMDKMKEMGVLVGKGGFYG--NVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 400 ~~~-~v~g~g~~~-~i~~~~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~~~~~--~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
.+. .+++.|.|+ ++.+... ..++-. +.+...+..+|+.+++.||..++ +++|++ +....+.++++++||+
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s---~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik 428 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLS---LFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIK 428 (447)
T ss_pred CcccCcCCCcceEEEeccchh---hhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHH
Confidence 665 677777765 4443211 112212 23334445568899999986654 899999 7889999999999999
Q ss_pred HHHhh
Q 011669 475 YSLSK 479 (480)
Q Consensus 475 ~~l~~ 479 (480)
++..+
T Consensus 429 ~Fc~R 433 (447)
T KOG0259|consen 429 EFCDR 433 (447)
T ss_pred HHHHh
Confidence 88653
No 193
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=7.6e-23 Score=204.12 Aligned_cols=308 Identities=14% Similarity=0.048 Sum_probs=201.9
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMM 177 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ 177 (480)
..++||.++. +++|...+.+.. ..+ ..|+.+. .+|+++|+++++.. .++|+++||++|++.....+
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~-------~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~ 90 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAW-------RRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPAL 90 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHH-------HhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHh
Confidence 4679999887 556755333321 112 2366665 89999999999765 47899999999999865432
Q ss_pred HHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEE
Q 011669 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (480)
Q Consensus 178 ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~ 257 (480)
..+ ++|++.+++|.++...+... |...++++. |. +.+.+ ....+
T Consensus 91 ---~~~-g~v~v~~P~y~~y~~~~~~~-------------g~~~~~v~~--------~~----~~~~~-------~~~~v 134 (339)
T PRK06959 91 ---LPR-GRVGIAPLAYSEYAPAFARH-------------GHRVVPLDE--------AA----DTLPA-------ALTHL 134 (339)
T ss_pred ---cCC-CeEEEcCCCcHHHHHHHHHC-------------CCEEEeecc--------cc----hhccc-------cCCEE
Confidence 223 35888999998766555433 233333321 10 11111 11256
Q ss_pred EEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cCccccccc
Q 011669 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAVV 336 (480)
Q Consensus 258 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v~ 336 (480)
++++|. |++|.+. +.+.++++.+.|+++++++|+||+|..|.... ........+...-+-||||.+| +|+|+||++
T Consensus 135 ~l~nPn-NPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~-s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v 211 (339)
T PRK06959 135 IVVNPN-NPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPAA-SLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVL 211 (339)
T ss_pred EEeCCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCcc-cchhccCCCCEEEEecChhhcCCcchheEEEe
Confidence 778884 6677664 77778888888999999999999999874322 2221211111122348999999 899999999
Q ss_pred cCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEe
Q 011669 337 TTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416 (480)
Q Consensus 337 ~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~ 416 (480)
+++++++.+.... ..++.|.+++.++.++|+ +.++.++.++.....++.+.+..+++++. +...++++|+.+.
T Consensus 212 ~~~~li~~l~~~~--~~~~vs~~~q~a~~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~--~~~~~~f~~~~~~ 284 (339)
T PRK06959 212 AAPALLAALRDAL--GAWTVSGPARHAVRAAFA---DAAWQAAMRERLAADGARLAALLRAHGFA--VHATPLFSWTDDP 284 (339)
T ss_pred cCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHCCCC--ccCcceEEEEeCC
Confidence 9999998887643 356678889999888885 23344444333333344444433333321 2234677777652
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
....+.+.|.++||+++..+. .+++||+ +..++++++.++++|+++++.
T Consensus 285 -----------~~~~l~~~l~~~GI~vr~~~~-~~~lRis--i~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 285 -----------RAAALHAALARRGIWTRYFAP-PPSVRFG--LPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred -----------CHHHHHHHHHhCCeEEEECCC-CCeEEEE--CCCCHHHHHHHHHHHHHHHHH
Confidence 135688899999999986543 3689999 446889999999999987753
No 194
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.2e-22 Score=211.56 Aligned_cols=297 Identities=14% Similarity=0.107 Sum_probs=184.0
Q ss_pred CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCC
Q 011669 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235 (480)
Q Consensus 156 ~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d 235 (480)
.+.++|++|+|+++|++.++..... +++.|++.+|+|.+......... |+..+++|......|+.|
T Consensus 117 v~pe~Ivit~Ga~~al~~l~~~l~~--pGD~Vlv~~P~Y~~~~~~~~~~~------------G~~vv~v~~~~~~~~~~~ 182 (496)
T PLN02376 117 FDPERVVMSGGATGANETIMFCLAD--PGDVFLIPSPYYAAFDRDLRWRT------------GVEIIPVPCSSSDNFKLT 182 (496)
T ss_pred CChhhEEEccchHHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhhC------------CCEEEEEeCCCCccCcCC
Confidence 4567899999999999999986643 67899999999988664332111 344444433222233334
Q ss_pred hHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc-c
Q 011669 236 GEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE-A 312 (480)
Q Consensus 236 ~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~-~ 312 (480)
.+.+++.++.. ...++++|++...+|++|.+ .+++.+++|.++|++||+++|+||+|..+.+.+..+..+. .
T Consensus 183 ----~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~-~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l 257 (496)
T PLN02376 183 ----VDAADWAYKKAQESNKKVKGLILTNPSNPLGTM-LDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEV 257 (496)
T ss_pred ----HHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHh
Confidence 34454433211 12356766666667778876 4889999999999999999999999998765552222211 1
Q ss_pred ---cC---CCcc----eeeeccccc-cCccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHH-HHH
Q 011669 313 ---HG---VVPD----IVTMAKGIG-NGIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKL-QNN 379 (480)
Q Consensus 313 ---~~---~~pD----ivt~sK~~g-~G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~-~~~ 379 (480)
.+ ..++ +.+|||.+| .|+|+||++++ +.+.+.+.... .....+.+.+.++.+.|+ +..+ .++
T Consensus 258 ~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~--~~~~vs~~~Q~a~~~~L~---d~~~~~~~ 332 (496)
T PLN02376 258 VNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS--SFGLVSSQTQLMLASMLS---DDQFVDNF 332 (496)
T ss_pred hccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh--hcCCCCHHHHHHHHHHhC---ChhHHHHH
Confidence 01 1223 237999998 89999999985 55655543322 122356777777777664 3333 223
Q ss_pred HHHHHHHH---HHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH-cCceeeccCcC----CC
Q 011669 380 AHVVGSYL---KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE-MGVLVGKGGFY----GN 451 (480)
Q Consensus 380 ~~~~~~~l---~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~ 451 (480)
++++.+++ ++.+.+..+++++.......|+++|+++...... ........++++.+.+ .||.+.||..| .+
T Consensus 333 l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~-~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g 411 (496)
T PLN02376 333 LMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRD-RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPG 411 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhcc-CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCC
Confidence 33333333 2333333333332222234568999998432110 0111123457777765 59999998655 36
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 452 VFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 452 ~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
++||+.. ..+++++++++++|.+++.
T Consensus 412 ~~Ri~fa-~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 412 WFRICFA-NMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred EEEEEee-CCCHHHHHHHHHHHHHHHH
Confidence 8999954 2578999999999999875
No 195
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-22 Score=206.09 Aligned_cols=336 Identities=15% Similarity=0.130 Sum_probs=211.7
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKM------PGNLKVVFFTNSGTEA 170 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA 170 (480)
+...+||..|.+.. ..++.+.+++.+.+.........| ......++++.+++++ +.+.++|++++|++++
T Consensus 32 ~~~~~~l~~g~p~~---~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 32 ADNVFDFSLGNPSV---PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCCeEEecCcCCCC---CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 34678998876543 356889998887665421111223 2334455555555543 2356789999999999
Q ss_pred HHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+..+++... .+++.|++.+++|.++....... |+....+|.... .|+.| .++++++++
T Consensus 109 l~~~~~~l~--~~gd~Vli~~p~~~~~~~~~~~~-------------g~~v~~v~~~~~-~~~~d----~~~l~~~~~-- 166 (394)
T PRK06836 109 LNVALKAIL--NPGDEVIVFAPYFVEYRFYVDNH-------------GGKLVVVPTDTD-TFQPD----LDALEAAIT-- 166 (394)
T ss_pred HHHHHHHhc--CCCCEEEEcCCCCccHHHHHHHc-------------CCEEEEEecCCc-cCcCC----HHHHHhhcC--
Confidence 999887653 36678999999987754432211 333333322111 12223 567777774
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH------hCCEEEEcccccCccccCCCccc-ccccCCCcceeeec
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK------AGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMA 323 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~------~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~s 323 (480)
+++++|++...++++|.+. +.+.+++|.++|++ ||+++|+||+|.+|...+..... ....+...-+-+||
T Consensus 167 --~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~S 243 (394)
T PRK06836 167 --PKTKAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFS 243 (394)
T ss_pred --cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecch
Confidence 2567777777788888765 78889999999999 89999999999988544411111 11122222233799
Q ss_pred cccc-cCccccccccCHHHHHh------hcCCCc-cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhH
Q 011669 324 KGIG-NGIPLGAVVTTPEIAEV------LTRRNY-FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395 (480)
Q Consensus 324 K~~g-~G~pig~v~~~~~~~~~------l~~~~~-~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~ 395 (480)
|.++ .|+|+||+++++++.+. +..... ...++.+++.+.++...++ +....+..++..+.+.+.|++
T Consensus 244 K~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~-- 318 (394)
T PRK06836 244 KSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTE-- 318 (394)
T ss_pred hhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHh--
Confidence 9999 89999999999876432 111111 1224566777777766654 222233344444555554443
Q ss_pred HhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 396 DKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 396 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
++........|+++|+.+... ...++++.|.++||.+.++..+ .+++||+.. .+++++++++++|
T Consensus 319 --~g~~~~~~~gg~~~~~~~~~~---------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l 385 (394)
T PRK06836 319 --LGFECVKPQGAFYLFPKSPEE---------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAF 385 (394)
T ss_pred --CCCEeecCCceEEEEEeCCCC---------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHH
Confidence 332222233467777765221 1345678888999999998544 378999964 6899999999999
Q ss_pred HHHHhh
Q 011669 474 DYSLSK 479 (480)
Q Consensus 474 ~~~l~~ 479 (480)
++++++
T Consensus 386 ~~~l~~ 391 (394)
T PRK06836 386 EKLAKE 391 (394)
T ss_pred HHHHHH
Confidence 998864
No 196
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=9.5e-22 Score=200.98 Aligned_cols=333 Identities=17% Similarity=0.138 Sum_probs=214.4
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc-------CChHHHHHHHHHHHhCCCC-CCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-------LNHAIADFAEALASKMPGN-LKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~-------~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGse 169 (480)
+..|||..+. |..++.|.+++.+.+.......... ......++++.++++++.. .++|+|++|+|+
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 5689996543 3456899999988775431111111 1234577899999999863 678999999999
Q ss_pred HHHHHHHHHHh--hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMARL--YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar~--~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++..++..... ..++++||+.++.|++......... ...|+..+.+|.... +..| .+++++++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~---------~~~g~~v~~v~~~~~--~~~~----~~~l~~~i 154 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVA---------QQTGAKVVKLPIGAD--LLPD----IRQLPELL 154 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHH---------HHcCcEEEEEecCCC--CCcC----HHHHHHHh
Confidence 99999886521 2356789999988876322111110 011333333332111 1112 56777777
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~ 325 (480)
+ +++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|..- .+.....+|+.++| |.
T Consensus 155 ~----~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~~-----~~~~~~~~d~~~~s~~K~ 220 (398)
T TIGR03392 155 T----PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHGP-----PDVQALDIDFYAFSGHKL 220 (398)
T ss_pred c----cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCCC-----CChhhcCCCEEEEecccc
Confidence 4 35778888888889999877 9999999999999999999996 33221 22223457888888 97
Q ss_pred cccCccccccccCHHHHHhhcCCCccc------------------cC---CCcHHHHHHHHHHHHHhhhh---HHHHHHH
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRRNYFN------------------TF---GGNPVCTAAGHAVLKVIQKD---KLQNNAH 381 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~~~~~------------------t~---~~~~~~~aaa~a~L~~i~~~---~~~~~~~ 381 (480)
+|. .++|++++++++++.+.....+. -| ..|..+.++..++++.+.+. +..++.+
T Consensus 221 ~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 221 YGP-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred cCC-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 663 24899999999887765321110 01 23344666777777776543 3445555
Q ss_pred HHHHHHHHHHHHhHHhcCceeeE-eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc----------CC
Q 011669 382 VVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF----------YG 450 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~ 450 (480)
++.+++++.|.++ +.+... .....++.+.+.. .....+.+.|.++||.+.++.. ..
T Consensus 300 ~l~~~l~~~l~~l----~g~~~~~~~~~~i~~~~~~~---------~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 366 (398)
T TIGR03392 300 SLADLAEERLAQL----PGFRSFRCPGSSLLAFDFAG---------VHHSDLAALLAESGIALRAGQHCAQPLMAALGVS 366 (398)
T ss_pred HHHHHHHHHHhcC----CCeEEeCCCCCcEEEEEeCC---------cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCC
Confidence 5555555555443 322211 1223455555421 1135677888999999987642 13
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 451 NVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 451 ~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+++|+++...+|++|++.++++|++++++
T Consensus 367 ~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 367 GTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999998765
No 197
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=8.5e-23 Score=199.03 Aligned_cols=334 Identities=16% Similarity=0.165 Sum_probs=219.0
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhc-ccccc-----ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI-QHSTV-----LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~ 173 (480)
-|+|..+... -+|+|+++|...+... +..++ .-.....++.++++++.++.+.++|+||++|||+|++
T Consensus 3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 5899877654 3599999999988775 22111 1224566788999999999888999999999999999
Q ss_pred HHHHHH-hh--cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 174 AIMMAR-LY--TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 174 Alk~ar-~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
||+-+. .+ .++.+-|+....-|-....++.-... .|+.....|... ++.-.+++|+++|.
T Consensus 77 aI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~---------~g~~Vtyl~V~~------~G~v~~e~L~~al~-- 139 (386)
T COG1104 77 AIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLER---------QGFEVTYLPVDS------NGLVDLEQLEEALR-- 139 (386)
T ss_pred HHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHh---------cCCeEEEeCCCC------CCeEcHHHHHHhcC--
Confidence 999642 22 12344555566666655544432211 133332222211 22222688888885
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeecccc-ccC
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGI-GNG 329 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~-g~G 329 (480)
+++..|.+..+||+.|.++| +++|.++|+++|++|++|.||. +|+.. .+......|+++||-.- +|.
T Consensus 140 --~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip-----i~~~~~~vD~ls~SaHK~~Gp 207 (386)
T COG1104 140 --PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP-----IDLEELGVDLLSFSAHKFGGP 207 (386)
T ss_pred --CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCcee-----ccccccCcceEEeehhhccCC
Confidence 47999999999999999999 9999999999999999999997 77653 34444458999998433 333
Q ss_pred ccccccccCHHHHHhhcCCCccccC-------CCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCc
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTF-------GGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGI 400 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~-------~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 400 (480)
-.+|+++.++.+. +.+..+++.+ .-|..+.++..+++++..+ +....++..++++|.+.|.+.....-+
T Consensus 208 kGiGaLyv~~~~~--~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 208 KGIGALYVRPGVR--LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CceEEEEECCCCc--cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 5678888876543 2222222211 1234444444555554433 345566777777777777664211111
Q ss_pred eee-EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------------------CCCEEEEeCC
Q 011669 401 IGD-VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------------------YGNVFRITPP 458 (480)
Q Consensus 401 ~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi~p~ 458 (480)
.+. .......+.+.|..- ..+.+...|..+||.+..|.. ....|||+..
T Consensus 286 ~g~~~~rlP~~~~~~f~gv---------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g 356 (386)
T COG1104 286 NGDDEPRLPNILNFSFPGV---------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG 356 (386)
T ss_pred cCCcccCCCCeEEEEeCCC---------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC
Confidence 111 122233444555321 246677777788999987631 1257999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhh
Q 011669 459 LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 459 ~~~t~~~id~~l~~l~~~l~~ 479 (480)
...|++|+|.++++|.+++++
T Consensus 357 ~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 357 RFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875
No 198
>PLN02721 threonine aldolase
Probab=99.91 E-value=2.8e-22 Score=201.53 Aligned_cols=331 Identities=17% Similarity=0.154 Sum_probs=205.0
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
+++||.++.++. .+|.+.+|+.+. ...+. ..++++...+|+++|+++++. +.++++++|++++..++....
T Consensus 6 ~~~~~~~~~~~~----~~~~~~~a~~~~--~~~~~-~~~~~~~~~~l~~~la~~~~~--~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 6 RVVDLRSDTVTK----PTDAMRAAMANA--EVDDD-VLGYDPTALRLEEEMAKIFGK--EAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhcccccC----CCHHHHHHHHhc--cCCCc-ccCCCHHHHHHHHHHHHHhCC--ceeEEecCccHHHHHHHHHHc
Confidence 578888888762 679999998763 12221 235567789999999999964 457899999999988887653
Q ss_pred hhcCCceEEEEcCCccccccc--ccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCc
Q 011669 180 LYTGCNDIISLRNAYHGNAAG--TMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGH 254 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG~~~~--~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~ 254 (480)
. .+++.|++.+++|...... .... .|+....+|... .+..| .+++++.++... .++
T Consensus 77 ~-~~gd~Vl~~~~~~~~~~~~~~~~~~------------~g~~~~~v~~~~--~~~~d----~~~l~~~i~~~~~~~~~~ 137 (353)
T PLN02721 77 D-VRGSEVILGDNSHIHLYENGGISTL------------GGVHPRTVKNNE--DGTMD----LDAIEAAIRPKGDDHFPT 137 (353)
T ss_pred c-CCCCeEEEcCccceehhcccchhhh------------cCceeEecCCCc--CCCcC----HHHHHHHHHhccCCCCCc
Confidence 2 1567899988886422211 1111 133333333211 12123 577888776321 136
Q ss_pred eEEEEEcccCCC-CcceeCCCChHHHHHHHHHHhCCEEEEcccccCccc---cCCCcccccccCCCcc--eeeecccccc
Q 011669 255 VAGFLSESIQGV-GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR---TGSHFWGFEAHGVVPD--IVTMAKGIGN 328 (480)
Q Consensus 255 ~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr---~G~~~~~~~~~~~~pD--ivt~sK~~g~ 328 (480)
+++|++++++++ +|.+ ++.+.+++|.++|++||+++|+||+|. ++- .+.. ........| +++++|++++
T Consensus 138 ~~~v~l~~~~~np~G~~-~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~---~~~~~~~~d~~~~s~sK~l~~ 212 (353)
T PLN02721 138 TRLICLENTHANCGGRC-LSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVP---VHRLVKAADSVSVCLSKGLGA 212 (353)
T ss_pred ceEEEEeccccccCCcc-ccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCC---HHHHhhhCCEEEEecccccCC
Confidence 789999886655 5554 588899999999999999999999985 321 1100 110011233 4578999874
Q ss_pred Cccccc-cccCHHHHHhhcCCCccccCCCc--HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee--e
Q 011669 329 GIPLGA-VVTTPEIAEVLTRRNYFNTFGGN--PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG--D 403 (480)
Q Consensus 329 G~pig~-v~~~~~~~~~l~~~~~~~t~~~~--~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~ 403 (480)
|+|+ +++++++++.+.........+.+ +..+++++.+++... ...++..++.+++.+.|+++ +.+. .
T Consensus 213 --~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~----~~~~~~~ 284 (353)
T PLN02721 213 --PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENV--PKLEDDHKKAKLLAEGLNQI----KGLRVNV 284 (353)
T ss_pred --ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhC----CCcEEec
Confidence 5675 66888887765432211111111 223333444443211 11233344455666655543 2221 1
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
....+.++++.+.... ......+.+.|.++||.+.+++ .+++|+++++.++++|+++++++|++++..
T Consensus 285 ~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 285 AAVETNIVYFDITDGS------RITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CCccceEEEEEccCCc------cccHHHHHHHHHhCCcEEecCC--CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 2334567777763210 0124678899999999999875 568999999899999999999999998764
No 199
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3.4e-22 Score=199.52 Aligned_cols=315 Identities=16% Similarity=0.153 Sum_probs=202.6
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
.|..++||..+... ++ .+|.+.+++.+.+... ....|+.....+++++++++++.+.++|++|+|+++++..+++
T Consensus 16 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~--~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~ 90 (337)
T PRK03967 16 EGNYRIWLDKNENP--FD-LPEELKEEIFEELKRV--PFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVK 90 (337)
T ss_pred CCCceEEecCCCCC--CC-CCHHHHHHHHHHhhcC--ccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHH
Confidence 45567888877643 33 4688999998877542 1234565667889999999998777899999999999987766
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
.. .++.|++.+++|..+..... .. |+..+.++.. ..|+.| .+.+++.+. +++
T Consensus 91 ~~----~gd~V~v~~P~y~~~~~~~~-~~------------g~~~~~v~~~--~~~~~d----~~~l~~~~~-----~~~ 142 (337)
T PRK03967 91 LF----EGKHIVITPPTFGMYSFYAK-LN------------GIPVIDVPLK--EDFTID----GERIAEKAK-----NAS 142 (337)
T ss_pred Hh----CCCeEEEeCCChHHHHHHHH-Hc------------CCeEEEeecC--CCCCcC----HHHHHHhcc-----CCC
Confidence 43 46789999999975443221 11 3333333221 123333 455655432 334
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCCCcceeeeccccc-cCccccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLGA 334 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig~ 334 (480)
++++...+|++|.+.+ .++|.++++ +++++|+||+|.+|.. . .... .+......-+-+|||.++ .|+|+||
T Consensus 143 ~v~~~~P~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~ 215 (337)
T PRK03967 143 AVFICSPNNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-K-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGY 215 (337)
T ss_pred EEEEeCCCCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-c-chHHHHhhCCCEEEEecchHhhcchhhhhee
Confidence 4444445777887765 577778884 7999999999998742 1 2111 111111223347999999 8999999
Q ss_pred cccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 335 v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++++.+.... ..++.+.+++.++.++|+. .+.+.+..+... ..++.+.+...++ ...+.|+++|+.
T Consensus 216 iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~-~~r~~l~~~L~~~----~~~~~~~~~~~~ 286 (337)
T PRK03967 216 AIANEEIIDALYRIK--PPFSLNILTMKIVRLALDH--YDLIEERIDYII-KERERVRRELGEY----AYPSDANFLLLK 286 (337)
T ss_pred eecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhC--HHHHHHHHHHHH-HHHHHHHHHhccC----cCCCCCcEEEEh
Confidence 999999988876543 3456788899988888862 122222222221 1222232222222 234567788775
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+ .+.+.|+++||.+.+++ ...+++||+. .+.++.++++++|+++.+
T Consensus 287 ~---------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 287 L---------------DAYDYLLENGIVVRKLSGRLEGHIRVTV---GKREENDEFIKALKEIKE 333 (337)
T ss_pred H---------------HHHHHHHHCCEEEEeCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 4 16788889999997653 2347899993 367888899999887764
No 200
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=205.11 Aligned_cols=301 Identities=16% Similarity=0.143 Sum_probs=192.3
Q ss_pred ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC
Q 011669 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 216 (480)
.|+.+...+|++.|+++++.+.++|++++|++|++..+++.... .+++.|++.+++|-.+...+..
T Consensus 55 ~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~-~g~~~vlv~~p~y~~~~~~~~~------------- 120 (364)
T PRK04781 55 RYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV-PGRDAVLVTPPVFGMYAVCARL------------- 120 (364)
T ss_pred cCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHH-------------
Confidence 35555568899999999987778999999999999999876532 2336788888877433322111
Q ss_pred CCeeEecCCCC-cCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 217 TGVHHALNPDP-YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 217 ~g~~~~~~p~~-~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
.|...+++|.. ....|..| .+++++.+. ..++++|++...+|++|.+. +.+.++++.+.|+ +++++|+||
T Consensus 121 ~g~~~~~v~~~~~~~~~~~d----~~~l~~~~~---~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~De 191 (364)
T PRK04781 121 QNAPLVEVPLVDGADGFHAD----VPAIVAAAL---ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDE 191 (364)
T ss_pred cCCEEEEEecCCCccCCCcC----HHHHHHHHh---ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeC
Confidence 13333333321 01112222 344433332 23566777767778888876 5666666666664 489999999
Q ss_pred cccCccccCCCccc-ccccCCCcceeeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh
Q 011669 296 VQAGFARTGSHFWG-FEAHGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (480)
Q Consensus 296 v~tgfgr~G~~~~~-~~~~~~~pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~ 373 (480)
+|..|.... .... .+..+...-+-||||.+| .|+|+||+++++++++.+.... ..++.+.+++.++.++|+.-..
T Consensus 192 ay~~f~~~~-~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~ 268 (364)
T PRK04781 192 AYGEFSDVP-SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAPAL 268 (364)
T ss_pred cchhhcCCc-chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcccH
Confidence 999885322 1111 122222233448999999 8999999999999998887643 4567788888888877753111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHhcCce-eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC---
Q 011669 374 DKLQNNAHVVGSYLKERLTALKDKYGII-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--- 449 (480)
Q Consensus 374 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--- 449 (480)
+...+.++.. ...++.+.+..+.++.+ ...+..|+++|+++.. ..++.+.|.++||++.++..+
T Consensus 269 ~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~-----------~~~~~~~l~~~gI~v~~~~~~~~~ 336 (364)
T PRK04781 269 AVTARRVAEV-RAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD-----------AEAAFQALLAAGVVVRDQRAAPRL 336 (364)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------HHHHHHHHHHCCeEEeeCCCCCCC
Confidence 2222222222 22333333333344322 2356679999988721 356788899999999987432
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 450 GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 450 ~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+++||+ ..+.++++.++++|+++..
T Consensus 337 ~~~~Ris---~~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 337 SDALRIT---LGTPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCeEEEe---CCCHHHHHHHHHHHHHHHh
Confidence 4789999 3478999999999988654
No 201
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=3.7e-22 Score=207.11 Aligned_cols=313 Identities=16% Similarity=0.112 Sum_probs=188.6
Q ss_pred HHHHHHHHHHhC----C----CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 143 IADFAEALASKM----P----GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 143 ~~~l~e~L~~~~----~----~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..+|++.|++++ + .+.++|++|+|++++++.++..... +++.|++.+|+|.++........
T Consensus 88 ~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~--pGd~Vlv~~P~Y~~~~~~~~~~~--------- 156 (468)
T PLN02450 88 LPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE--PGDAFLLPTPYYPGFDRDLKWRT--------- 156 (468)
T ss_pred hHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC--CCCEEEECCCCCCchHHHHhhcC---------
Confidence 345555555544 2 3567899999999999998886543 67899999999977654332111
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
|+..+++|......|..| .+++++.++.. ...+++++++...+|++|.+ .+++.+++|.++|++||+++|
T Consensus 157 ---g~~~v~v~~~~~~~~~~~----~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~-~s~e~l~~ll~~a~~~~~~iI 228 (468)
T PLN02450 157 ---GVEIVPIHCSSSNGFQIT----ESALEEAYQQAQKLNLKVKGVLITNPSNPLGTT-TTRTELNLLVDFITAKNIHLI 228 (468)
T ss_pred ---CcEEEEEecCCccCCcCC----HHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcc-cCHHHHHHHHHHHHHCCcEEE
Confidence 333344332212233333 35566655431 12256655555556677766 588999999999999999999
Q ss_pred EcccccCccccCCCcccc-cc-----------cCCCcceeeeccccc-cCccccccccCHH-HHHhhcCCCccccCCCcH
Q 011669 293 ADEVQAGFARTGSHFWGF-EA-----------HGVVPDIVTMAKGIG-NGIPLGAVVTTPE-IAEVLTRRNYFNTFGGNP 358 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~-~~-----------~~~~pDivt~sK~~g-~G~pig~v~~~~~-~~~~l~~~~~~~t~~~~~ 358 (480)
+||+|.++-+.+..+... .. .+...-+-+|||.++ +|+|+||++++++ +.+.+..... ....+.
T Consensus 229 ~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~--~~~~s~ 306 (468)
T PLN02450 229 SDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS--FGLVSS 306 (468)
T ss_pred EEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh--cCCCCH
Confidence 999999875554222111 11 111122448999999 8999999999854 5555443321 123577
Q ss_pred HHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH
Q 011669 359 VCTAAGHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (480)
Q Consensus 359 ~~~aaa~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 437 (480)
+++.++.+.|+.-.- ..+.+..++.-...++.+.+..+++++.......|+++|+.+..... ...-.....+++.|+
T Consensus 307 ~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~--~~~~~~~~~l~~~ll 384 (468)
T PLN02450 307 QTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLK--SNTFEAEMELWKKIV 384 (468)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcC--cCCchHHHHHHHHHH
Confidence 888888777752110 11222222222222333333334444322223457788988743111 011112234555554
Q ss_pred -HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 438 -EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 438 -~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.||.+.||..| .+++||+... .+++++++++++|++++.+
T Consensus 385 ~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 385 YEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVES 430 (468)
T ss_pred HhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHh
Confidence 579999998654 3689999442 4789999999999998764
No 202
>PRK07908 hypothetical protein; Provisional
Probab=99.91 E-value=7.2e-22 Score=198.27 Aligned_cols=314 Identities=13% Similarity=0.124 Sum_probs=202.0
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCC-hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN-HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
+..++||..|.... ..++.+.+++.+.+... ..|+. ....++++.++++++.+.++|++|+|++||+..+++
T Consensus 21 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~----~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVRHD---TPPEWLRERLAARLGDL----AAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCCCC---CCCHHHHHHHHHHhhHh----hcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh
Confidence 57899998876542 25788999999887653 22443 467789999999998778899999999999998887
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
. .+ +++++..++|.+....... .|+..+.+|... .|+.| .+. ++ ++++
T Consensus 94 -l---~~-~~viv~~P~y~~~~~~~~~-------------~G~~i~~v~~~~--~~~~d----~~~----l~----~~~~ 141 (349)
T PRK07908 94 -L---RP-RRAAVVHPSFTEPEAALRA-------------AGIPVHRVVLDP--PFRLD----PAA----VP----DDAD 141 (349)
T ss_pred -c---CC-CeEEEeCCCChHHHHHHHH-------------cCCEEEeeccCc--ccCcC----hhH----hc----cCCC
Confidence 2 23 5677788998655432211 134444333221 13222 222 22 2455
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcce---eeeccccc-cCccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI---VTMAKGIG-NGIPL 332 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDi---vt~sK~~g-~G~pi 332 (480)
++++-..+|++|.+.+ .++|.++|++ ++++|+||+|..|. .+ ........+ .+++ -+|||.++ .|+|+
T Consensus 142 ~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~l~~~~-~~~~i~i~S~SK~~~l~GlRi 213 (349)
T PRK07908 142 LVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAV-PG-EPESLAGDD-LPGVLVLRSLTKTWSLAGLRV 213 (349)
T ss_pred EEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhc-cC-Ccccccccc-CCCEEEEeecccccCCcccee
Confidence 6666555677888775 5678888864 78899999998763 23 221221111 1233 37899999 89999
Q ss_pred cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccce
Q 011669 333 GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (480)
Q Consensus 333 g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 409 (480)
||+++++++++.+..... .+..+++.++++.+.++.... ++..+++++..+++.+.|++ +++.......|+
T Consensus 214 G~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~ 287 (349)
T PRK07908 214 GYALGAPDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VGARVVDPAAAP 287 (349)
T ss_pred eeeecCHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CCcEeccCCCce
Confidence 999999999888765432 245556666655554431000 12233333334444444433 332222225688
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
++|+.+.. ...+.+.|+++||.+.++..+ .+++||+. .+++++++++++|++++.
T Consensus 288 ~~~~~~~~-----------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 288 FVLVRVPD-----------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEEECCc-----------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 88887631 356778889999999987543 47999994 478899999999998765
No 203
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.91 E-value=2.1e-22 Score=206.98 Aligned_cols=344 Identities=14% Similarity=0.069 Sum_probs=203.7
Q ss_pred EEEeccCCcccccCCCCC--HHHHHHHHHHHHhccc--cccccCC-hHHHHHHHHHHHhC------CCCCCEEEEeCCHH
Q 011669 100 RYLDAFGGIATVCCGHCH--PYVVDSIVNQIKRIQH--STVLYLN-HAIADFAEALASKM------PGNLKVVFFTNSGT 168 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~--p~v~~A~~~~~~~~~~--~~~~~~~-~~~~~l~e~L~~~~------~~~~~~v~f~~sGs 168 (480)
..|||..|.+.. ... +.+.+++.+.+..... ....|.. ....+|++.|++++ +.+.++|++|+|++
T Consensus 31 ~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPAH---IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCCc---cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence 458888776542 122 3566666665543110 0012332 22344555555543 34567899999999
Q ss_pred HHHHHHHHHHHhh---cCCceEEE-EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHH
Q 011669 169 EANELAIMMARLY---TGCNDIIS-LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244 (480)
Q Consensus 169 eA~~~Alk~ar~~---~~~~~ii~-~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le 244 (480)
+|+..++++.... ..++.|++ .+++|.++...+........ .+...++.+.. ...|+.| .+.++
T Consensus 108 ~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~d----~~~l~ 175 (416)
T PRK09440 108 SAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVS-------YRPNIELLPEG-QFKYHVD----FEHLH 175 (416)
T ss_pred HHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceee-------ccccccccccc-ccccCCC----HHHcc
Confidence 9999998865432 13567888 69999987654332110000 01111111110 0012223 34454
Q ss_pred HHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc--ccCCCcceeee
Q 011669 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE--AHGVVPDIVTM 322 (480)
Q Consensus 245 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~--~~~~~pDivt~ 322 (480)
+ ..+++++++.+.+|++|.+. +.+.+++|.++|++||+++|+||+|..+-... .+.... ..+...-+.+|
T Consensus 176 --~----~~~~~~i~l~~P~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~~~~vI~~~Sf 247 (416)
T PRK09440 176 --I----DEDTGAICVSRPTNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATPLWNPNIILCMSL 247 (416)
T ss_pred --c----CCCceEEEEecCCCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCccccCCeEEEecc
Confidence 1 12455666655577888774 88899999999999999999999996431110 010110 01222334589
Q ss_pred ccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHH--------HHHHHHHHHHHHHh
Q 011669 323 AKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNA--------HVVGSYLKERLTAL 394 (480)
Q Consensus 323 sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~--------~~~~~~l~~~L~~l 394 (480)
||....|+|+||+++++++++.+........++.+.+.+.++.++|+. ..+.++. +++.+.+++.|.+.
T Consensus 248 SK~~~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 248 SKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 997447999999999999998887654444566788888888888752 2232222 22333333333332
Q ss_pred HHhcCceeeEec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-----------CCEEEEeCCCCCC
Q 011669 395 KDKYGIIGDVRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY-----------GNVFRITPPLCFT 462 (480)
Q Consensus 395 ~~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-----------~~~iRi~p~~~~t 462 (480)
....+ +....+ .|+++|+++.... .....+.+.|.++||.+.++..| .+++||+.. .+
T Consensus 325 l~~~~-~~~~~p~gg~fiw~~~~~~~-------~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~ 394 (416)
T PRK09440 325 LPDEP-CLIHKPEGAIFLWLWFKDLP-------ITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QD 394 (416)
T ss_pred cccCC-eEEecCCCceEEEEECCCCC-------CCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CC
Confidence 21111 222344 4788898874311 11356777888999999997543 148999944 58
Q ss_pred HHHHHHHHHHHHHHHhh
Q 011669 463 KEDADYLVDVMDYSLSK 479 (480)
Q Consensus 463 ~~~id~~l~~l~~~l~~ 479 (480)
++++++++++|.+++++
T Consensus 395 ~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 395 DEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 204
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.91 E-value=2.8e-21 Score=197.67 Aligned_cols=333 Identities=17% Similarity=0.130 Sum_probs=214.8
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-------ccCChHHHHHHHHHHHhCCC-CCCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-------LYLNHAIADFAEALASKMPG-NLKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-------~~~~~~~~~l~e~L~~~~~~-~~~~v~f~~sGse 169 (480)
+..|||-.+. |-.++.|.+++.+.+........ ....+...+++++++++++. +.++|+|++|+|+
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 4679996543 34568999999887765321111 11134567899999999987 6789999999999
Q ss_pred HHHHHHHHHHh--hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMARL--YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar~--~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++..+++.... ..++++||+.++.|++.......... ..|+....+|... .+..| .+++++.+
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~--~~~~d----~~~l~~~i 157 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQ---------QTGAKVVKLPLGA--DRLPD----VDLLPELI 157 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHH---------HhCCEEEEEecCC--CCcCC----HHHHHHhc
Confidence 99999886531 24668899999988763221111100 0133332222211 11122 56777777
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~ 325 (480)
+ +++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|. +|... .+.....+|++++| |.
T Consensus 158 ~----~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~~-----~~~~~~~~d~~~~s~~K~ 223 (401)
T PRK10874 158 T----PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHFP-----ADVQALDIDFYAFSGHKL 223 (401)
T ss_pred C----cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-ccccc-----CCchhcCCCEEEEecccc
Confidence 4 36778888888889998887 9999999999999999999996 33221 22223357877655 96
Q ss_pred cccCccccccccCHHHHHhhcCCCcc---------------------ccCCCcHHHHHHHHHHHHHhhhh---HHHHHHH
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRRNYF---------------------NTFGGNPVCTAAGHAVLKVIQKD---KLQNNAH 381 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~~~~---------------------~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~ 381 (480)
+|. ..+|++++++++++.+.....+ .....|..+.++..++++.+.+. ...++.+
T Consensus 224 ~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~ 302 (401)
T PRK10874 224 YGP-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSR 302 (401)
T ss_pred cCC-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 652 2469999999988776532100 00123445666666777766543 3445555
Q ss_pred HHHHHHHHHHHHhHHhcCceeeEe-ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC----------C
Q 011669 382 VVGSYLKERLTALKDKYGIIGDVR-GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY----------G 450 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~----------~ 450 (480)
++.+++++.|+++ +.+.... ..+.++.+.+.. ....++.+.|.++||.+.++... .
T Consensus 303 ~l~~~l~~~l~~~----~g~~~~~~~~~~i~~~~~~~---------~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 369 (401)
T PRK10874 303 SLATLAEDALAKL----PGFRSFRCQDSSLLAFDFAG---------VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVT 369 (401)
T ss_pred HHHHHHHHHHhcC----CCEEEeCCCCCcEEEEEECC---------cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCC
Confidence 5566666655543 3222221 233455555421 01356778888999999875421 3
Q ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 451 NVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 451 ~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+++||++...+|++||+.++++|+++++.
T Consensus 370 ~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 370 GTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999998764
No 205
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=2.7e-22 Score=206.67 Aligned_cols=310 Identities=15% Similarity=0.177 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHhC----CCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCC
Q 011669 142 AIADFAEALASKM----PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (480)
Q Consensus 142 ~~~~l~e~L~~~~----~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 217 (480)
...++++.+.+.+ +.+.++|++|+|+++|++.++.... .+++.|++.+|.|.++........
T Consensus 100 LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--~pGD~Vlv~~P~Y~~f~~~~~~~~------------ 165 (447)
T PLN02607 100 FRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--DPGDALLVPTPYYPGFDRDLRWRT------------ 165 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--CCCCEEEEcCCCCcchHHHHHhcC------------
Confidence 3344444444433 2456789999999999999877543 367899999999987654332111
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|+..++++......|..| .+.++++++.. ...+++++++...+|++|.+ ++++.+++|.++|++||+++|+||
T Consensus 166 g~~vv~v~~~~~~~f~~~----~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~-~s~e~l~~l~~~~~~~~i~lI~DE 240 (447)
T PLN02607 166 GVKIVPIHCDSSNNFQVT----PQALEAAYQEAEAANIRVRGVLITNPSNPLGAT-VQRSVLEDILDFVVRKNIHLVSDE 240 (447)
T ss_pred CcEEEEEeCCCCCCCcCC----HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcc-cCHHHHHHHHHHHHHCCCEEEEec
Confidence 333444332222233334 45666665421 12356666665556777765 588999999999999999999999
Q ss_pred cccCccccCCCccccc----ccCC-C-cc----eeeeccccc-cCcccccccc-CHHHHHhhcCCCccccC-CCcHHHHH
Q 011669 296 VQAGFARTGSHFWGFE----AHGV-V-PD----IVTMAKGIG-NGIPLGAVVT-TPEIAEVLTRRNYFNTF-GGNPVCTA 362 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~----~~~~-~-pD----ivt~sK~~g-~G~pig~v~~-~~~~~~~l~~~~~~~t~-~~~~~~~a 362 (480)
+|.++-..+..+.... ..+. . ++ +.+|||.+| +|+|+||+++ ++++++.+.... .+ +.+.+++.
T Consensus 241 iYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---~~~~~s~~~q~ 317 (447)
T PLN02607 241 IYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---SFTLVSSQTQH 317 (447)
T ss_pred cccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh---hcCCCCHHHHH
Confidence 9987543331222211 1110 1 22 337999999 8999999998 567766655332 22 34566777
Q ss_pred HHHHHHHHhhhhHHH-HHHHHHHHHHHHH---HHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH-
Q 011669 363 AGHAVLKVIQKDKLQ-NNAHVVGSYLKER---LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK- 437 (480)
Q Consensus 363 aa~a~L~~i~~~~~~-~~~~~~~~~l~~~---L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~- 437 (480)
++.+.|+ ++++. +.+.++.++++++ +.+..+++++.......|+|+|+++..... .+......++++.++
T Consensus 318 ~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~--~~~~~~e~~l~~~ll~ 392 (447)
T PLN02607 318 LLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLE--TPTREGELALWDSILR 392 (447)
T ss_pred HHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhc--CCCchhHHHHHHHHHH
Confidence 6666654 33332 2333333333333 333333344322223458899999843110 111122345666665
Q ss_pred HcCceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 438 EMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 438 ~~Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.||.+.||..+ .+++||+... .+++++++++++|.+++++
T Consensus 393 ~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 393 EVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred hCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 579999998654 4799999442 4799999999999998753
No 206
>PLN02231 alanine transaminase
Probab=99.91 E-value=4.1e-22 Score=208.79 Aligned_cols=336 Identities=16% Similarity=0.176 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHhc-cccccccC-ChHHHHHHHHHHHhC------CCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 118 PYVVDSIVNQIKRI-QHSTVLYL-NHAIADFAEALASKM------PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 118 p~v~~A~~~~~~~~-~~~~~~~~-~~~~~~l~e~L~~~~------~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
.++++.+.+.+... ......|. .....+|++.+++++ +.+.++|++|+|+++|+..++++... .+++.|++
T Consensus 143 ~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~~gd~Vli 221 (534)
T PLN02231 143 ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEKDGILC 221 (534)
T ss_pred HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-CCCCEEEE
Confidence 46666666666542 11122222 334455555555543 34567999999999999999987642 25689999
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC--CceEEEEEcccCCCC
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS--GHVAGFLSESIQGVG 267 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~--~~~a~vi~epi~~~~ 267 (480)
..|+|.++....... |...++++......|+.| .++|++.++.... .+++++++...+|++
T Consensus 222 ~~P~Y~~y~~~~~~~-------------g~~~v~~~l~~~~~~~~d----~~~Le~~l~~~~~~~~~~k~ivl~nP~NPT 284 (534)
T PLN02231 222 PIPQYPLYSASIALH-------------GGTLVPYYLDEATGWGLE----ISELKKQLEDARSKGITVRALVVINPGNPT 284 (534)
T ss_pred eCCCChhHHHHHHHc-------------CCEEEEEecCcccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEeCCCCCC
Confidence 999998776554333 222333332222235545 5677777753211 145554444446777
Q ss_pred cceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc-CCCccccccc----CC---Cccee---eecccc-c-cCccccc
Q 011669 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWGFEAH----GV---VPDIV---TMAKGI-G-NGIPLGA 334 (480)
Q Consensus 268 G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~-G~~~~~~~~~----~~---~pDiv---t~sK~~-g-~G~pig~ 334 (480)
|.+ .+++.+++|.++|++||++||+||+|..+.+. +..+..+... +. ...++ +|||++ + .|+|+||
T Consensus 285 G~v-ls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy 363 (534)
T PLN02231 285 GQV-LAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 363 (534)
T ss_pred CcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEE
Confidence 866 58999999999999999999999999988663 3222122110 11 11233 789987 4 6999999
Q ss_pred ccc---CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHH-------hhh-----hHHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 335 VVT---TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV-------IQK-----DKLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 335 v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~-------i~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
+++ ++++++.+..... .+.+.+.++++++..+++- .++ +.+.+.+++..+.+.+.|+ +++
T Consensus 364 ~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~----~~~ 438 (534)
T PLN02231 364 MEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALN----SLE 438 (534)
T ss_pred EEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCC
Confidence 986 6788887754332 3456677788877776631 100 1122333444444444433 334
Q ss_pred ceeeEecccee-EEEEEecCCCcCCCC----HHHHHHHHHHHH-HcCceeeccCcCC-----CEEEEeCCCCCCHHHHHH
Q 011669 400 IIGDVRGRGFL-LGVEFVTDRQLKTPA----KAETLYIMDKMK-EMGVLVGKGGFYG-----NVFRITPPLCFTKEDADY 468 (480)
Q Consensus 400 ~~~~v~g~g~~-~~i~~~~~~~~~~~~----~~~~~~~~~~l~-~~Gv~v~~~~~~~-----~~iRi~p~~~~t~~~id~ 468 (480)
.+....+.|.| +|..+.-........ ......++..|+ +.||.+.||..|+ .++|++ +..+++++++
T Consensus 439 gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit--~~~~~e~l~e 516 (534)
T PLN02231 439 GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT--ILPQEDKIPA 516 (534)
T ss_pred CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE--eCCCHHHHHH
Confidence 44444555554 553331100000000 000123445454 6799999986553 369999 5789999999
Q ss_pred HHHHHHHHHhh
Q 011669 469 LVDVMDYSLSK 479 (480)
Q Consensus 469 ~l~~l~~~l~~ 479 (480)
++++|.+++++
T Consensus 517 al~RL~~~~~~ 527 (534)
T PLN02231 517 IVSRLTEFHKS 527 (534)
T ss_pred HHHHHHHHHHH
Confidence 99999988754
No 207
>PRK08354 putative aminotransferase; Provisional
Probab=99.91 E-value=9.2e-22 Score=194.22 Aligned_cols=301 Identities=14% Similarity=0.129 Sum_probs=197.2
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
+...+|||..+. +.+ .+|.+.+++.+.+... ..|+ ....++++++++++ ++|++|+|++||+..++.
T Consensus 6 ~~~~~i~l~~~~--np~--~p~~~~~a~~~~~~~~----~~yp--~~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 6 REEGLIDFSASV--NPY--PPEWLDEMFERAKEIS----GRYT--YYEWLEEEFSKLFG---EPIVITAGITEALYLIGI 72 (311)
T ss_pred CccceeEecCCC--CCC--CCHHHHHHHHHHHHHh----hcCC--ChHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH
Confidence 344699998775 333 4688999998776543 2343 24678999999985 359999999999987764
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
++ .+++.|++.+++|.++...+.... ...+..+ .| .+.+++.++ +...
T Consensus 73 ~~---~~gd~vlv~~P~y~~~~~~~~~~g-------------~~~~~~~--------~d----~~~l~~~~~----~~~~ 120 (311)
T PRK08354 73 LA---LRDRKVIIPRHTYGEYERVARFFA-------------ARIIKGP--------ND----PEKLEELVE----RNSV 120 (311)
T ss_pred hh---CCCCeEEEeCCCcHHHHHHHHHcC-------------CEEeecC--------CC----HHHHHHhhc----CCCE
Confidence 32 257889999999988766554332 2222211 12 456666654 1335
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccc-cCcccccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAV 335 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v 335 (480)
.++++| +|++|.+ .+.+.+++|.++|++||+++|+||+|.+|...+ .. .. .+...-+-+|||.++ .|+|+||+
T Consensus 121 vi~~~P-~NPTG~~-~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~-~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~ 194 (311)
T PRK08354 121 VFFCNP-NNPDGKF-YNFKELKPLLDAVEDRNALLILDEAFIDFVKKP-ES--PE-GENIIKLRTFTKSYGLPGIRVGYV 194 (311)
T ss_pred EEEecC-CCCCCCc-cCHHHHHHHHHHhhhcCcEEEEeCcchhccccc-cc--cC-CCcEEEEeccHhhcCCccceeeee
Confidence 667777 5677765 488889999999999999999999999885543 21 11 222223447999999 89999999
Q ss_pred ccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEE
Q 011669 336 VTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415 (480)
Q Consensus 336 ~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~ 415 (480)
++ +.+.+.... ..+..+..+++++.+.++ +. .+++++..+++++..+.+.... ...+.|.++++++
T Consensus 195 v~---~~~~l~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~ 260 (311)
T PRK08354 195 KG---FEEAFRSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL----YVKSDANFFIKDV 260 (311)
T ss_pred ee---hHHHHHHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc----CCCCCCcEEEEEC
Confidence 98 334444322 234445555555555443 11 2334444444444444443222 1345677766654
Q ss_pred ecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 416 VTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
. + ..++++.|+++||++.++..+ .+++||+ ..+.++.++++++|++.
T Consensus 261 ~--------~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 261 G--------D---AEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREENEKLIRALREW 309 (311)
T ss_pred C--------C---HHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHHHHHHHHHHHHh
Confidence 1 1 356788899999999998655 3789999 34667788888888765
No 208
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=7.1e-23 Score=205.57 Aligned_cols=292 Identities=15% Similarity=0.153 Sum_probs=190.4
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
+.|+.....++++++++.++.+.++|++++|++|++..+++.... .+++.|++.+++|..+...+...
T Consensus 52 ~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~-~g~~~vli~~P~y~~y~~~~~~~----------- 119 (351)
T PRK01688 52 NRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYCPPTYGMYSVSAETI----------- 119 (351)
T ss_pred ccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC-CCCCEEEEcCCCHHHHHHHHHHc-----------
Confidence 457777778999999999988888999999999999999986532 23478999999997654332221
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|+..+.+|.. ..|..| .+++++.++ ++++|++...+|++|.+. +.+.+++|.+.|++ ++++|+||
T Consensus 120 --G~~~~~v~~~--~~~~~d----~~~l~~~~~-----~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDE 184 (351)
T PRK01688 120 --GVEIRTVPTL--DNWQLD----LPAIADNLD-----GVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADE 184 (351)
T ss_pred --CCEEEEeecC--CCCCCC----HHHHHHhcc-----CCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEEC
Confidence 3333333221 123333 455655542 445555555567777765 77778888888876 68999999
Q ss_pred cccCccccCCCcccccccCCCcce---eeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDI---VTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDi---vt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i 371 (480)
+|..|.... .. .......+++ -||||.+| +|+|+||+++++++++.+.... ..|+.|.+++.++.++|+.-
T Consensus 185 ay~~f~~~~-s~--~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~--~~~~v~~~~~~~a~~~L~~~ 259 (351)
T PRK01688 185 AYIEFCPQA-SL--AGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVI--APYPLSTPVADIAAQALSPQ 259 (351)
T ss_pred chhhcCCCC-Ch--HHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcc
Confidence 998885221 11 1111222343 37999999 8999999999999998887543 34667777777777777521
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHhcCce-eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-
Q 011669 372 QKDKLQNNAHVVGSYLKERLTALKDKYGII-GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY- 449 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~- 449 (480)
..+.+.++.+ .....++.+.+...+++.+ ......+.++++.+.. ...+.+.|+++||+++.++.+
T Consensus 260 ~~~~~~~~~~-~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~-----------~~~l~~~L~~~gi~vr~~~~~~ 327 (351)
T PRK01688 260 GIAAMRERVA-EINANRQWLIAALKEIPCVEQVFDSETNYILARFTA-----------SSAVFKSLWDQGIILRDQNKQP 327 (351)
T ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------HHHHHHHHHHCCeEEEECCCcC
Confidence 1112222222 2222233333333344333 2345567888877621 356888899999999876432
Q ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 450 --GNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 450 --~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
.+++||+. .++++++.++++|+
T Consensus 328 ~~~~~iRis~---~~~~e~~~l~~al~ 351 (351)
T PRK01688 328 GLSNCLRITI---GTREECQRVIDALR 351 (351)
T ss_pred CCCCeEEEeC---CCHHHHHHHHHhhC
Confidence 47899994 47899999998873
No 209
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.90 E-value=9e-22 Score=199.86 Aligned_cols=328 Identities=16% Similarity=0.151 Sum_probs=204.3
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHhcc-cccccc-----CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVLY-----LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~-----~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~A 174 (480)
|||..+. +-.++.|.+++.+.+.... +....+ ......++++++++.++.+.++|+|++|||++++.+
T Consensus 2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~a 75 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTA 75 (379)
T ss_pred cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHH
Confidence 6776543 3457899999998876431 111111 123467888999999987778899999999999999
Q ss_pred HHHHHhh-cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 175 IMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 175 lk~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
++.+... .+++.|++....|++.......+.. .|+....+|....+ ..| .++++++++ +
T Consensus 76 l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~----------~G~~v~~v~~~~~g--~~~----~~~l~~~i~----~ 135 (379)
T TIGR03402 76 IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEK----------QGYKVTYLPVDEEG--RLD----LEELRAAIT----D 135 (379)
T ss_pred HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHH----------cCCEEEEEccCCCC--cCC----HHHHHHhcC----C
Confidence 9876432 3456677666666543322211110 13322222221111 122 567777774 3
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCcc
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIP 331 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~p 331 (480)
+++++++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|.. .++.....+|++++| | +.+...
T Consensus 136 ~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G 204 (379)
T TIGR03402 136 DTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI-----PIDLKEMNIDMLSLSGHK-LHGPKG 204 (379)
T ss_pred CcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc-----ccCcccCCCCEEEEcHHH-cCCCCc
Confidence 6788888888899999887 8999999999999999999997 4422 133334568999888 9 655455
Q ss_pred ccccccCHHHHHhhcCCCc-------cccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCcee
Q 011669 332 LGAVVTTPEIAEVLTRRNY-------FNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (480)
Q Consensus 332 ig~v~~~~~~~~~l~~~~~-------~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 402 (480)
+|+++.+++.. +.+... ......|..+..+..++++.+.+ ++..++.+++.+++++.|.+ ..+.+.
T Consensus 205 ~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~~~~ 279 (379)
T TIGR03402 205 VGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA---RIPDAR 279 (379)
T ss_pred eEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---hCCCEE
Confidence 78887776541 222111 01123345556666677776543 23335555556666665553 122221
Q ss_pred eEe---cc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC---------------------CCEEEEeC
Q 011669 403 DVR---GR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY---------------------GNVFRITP 457 (480)
Q Consensus 403 ~v~---g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~---------------------~~~iRi~p 457 (480)
-.. .. ...+.+.+.. +. ...+...|.++||.+..+... .+.+|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~ 350 (379)
T TIGR03402 280 LNGDPTKRLPNTVNISFEY------IE---GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSL 350 (379)
T ss_pred EeCCCccCCCCEEEEEecC------CC---HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEc
Confidence 110 01 1122222211 11 356777888899999865210 25799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 011669 458 PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+..+|++|||++++.|++++++
T Consensus 351 ~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 351 SRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988754
No 210
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.90 E-value=5.9e-22 Score=200.32 Aligned_cols=304 Identities=14% Similarity=0.149 Sum_probs=187.5
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~ 219 (480)
++...++.|.++++++. +.+.+++||++++..++.... .+++.|++..+.++.... ..... |+
T Consensus 50 ~~~~~~~~e~lA~~~g~--~~~~i~~g~~~a~~~~~~~l~--~~gd~Vl~~~~~h~s~~~-~~~~~------------g~ 112 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGM--DEARVTHGAREGKFAVMHALC--KEGDWVVLDGLAHYTSYV-AAERA------------GL 112 (370)
T ss_pred chHHHHHHHHHHHHhCC--CceEEECChHHHHHHHHHHhh--CCCCEEEECCcccHHHHH-HHHHc------------CC
Confidence 34678889999999854 457789999999999988664 356777776666554332 22222 23
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
....+|......|..| .+++++.++... ..++++|+++.++++.|.+.+ +++|.++|++||+++|+||+
T Consensus 113 ~~~~~~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea 184 (370)
T TIGR02539 113 NVKEVPHTGHPEYKVD----PEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCA 184 (370)
T ss_pred EEEEEecCCcccCCcC----HHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECc
Confidence 3222221111112234 677777775311 125678888888888898876 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCcce--eeeccccccCccccccccCHHHHHhhcCCCccccC--------CCcHHHHHHHHH
Q 011669 297 QAGFARTGSHFWGFEAHGVVPDI--VTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTF--------GGNPVCTAAGHA 366 (480)
Q Consensus 297 ~tgfgr~G~~~~~~~~~~~~pDi--vt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~--------~~~~~~~aaa~a 366 (480)
|. +|..+ ....+..+|+ .+++|++++|.|+||+++++++++.+........+ .....++.++.+
T Consensus 185 ~~-~g~~~-----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (370)
T TIGR02539 185 YT-VGRMP-----VSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMA 258 (370)
T ss_pred cc-cCCcC-----CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHH
Confidence 97 44322 1111123454 47899999777899999999999888764321111 111225555666
Q ss_pred HHHHhhhh-HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCce-ee
Q 011669 367 VLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVL-VG 444 (480)
Q Consensus 367 ~L~~i~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~ 444 (480)
+|+...+. ....+..+..++++++|+++ .+..+........++.+++.........+......+.+.|+++||+ +.
T Consensus 259 al~~~~~~l~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir 336 (370)
T TIGR02539 259 SFPHVVERVKRWDEEVKKTRWFVAELEDI--GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR 336 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc
Confidence 66542221 11222233345677777665 1211111234455665554210000000011235688999999997 66
Q ss_pred ccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 445 KGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 445 ~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++. .+++||+. +.+|++|+++++++|++++++
T Consensus 337 ~~~--~~~iRis~-~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 SGQ--TKYFKLSV-YGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CCc--ceEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence 533 46899997 468999999999999998865
No 211
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3e-22 Score=204.82 Aligned_cols=338 Identities=14% Similarity=0.109 Sum_probs=201.2
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCC------CCCCEEE--EeCCH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMP------GNLKVVF--FTNSG 167 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~------~~~~~v~--f~~sG 167 (480)
...+|+..|.+... ..++.+.+++.+.+.... ......+.....+|++.+++++. .+.++|. .|++|
T Consensus 29 ~~~i~l~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDE--NGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECC--CCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCc
Confidence 35588877764211 122334455544432211 11112224455667777776542 2446777 48899
Q ss_pred HHHHHHHHHHHHhh-cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 168 TEANELAIMMARLY-TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 168 seA~~~Alk~ar~~-~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
++|++.++.+.+.. .+++.|++.+++|+++...+... |...+++|......|+.| .+.+++.
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~l~~~~~~~~d----~~~l~~~ 169 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSA-------------GLNVKEYRYYDPKTKGLD----FDGMLED 169 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-------------CCceeeccccCcccCCcC----HHHHHHH
Confidence 99999998755433 46789999999998876654433 223333332111123334 5677777
Q ss_pred HHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC--C---cccccc-cCCCccee
Q 011669 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS--H---FWGFEA-HGVVPDIV 320 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~--~---~~~~~~-~~~~pDiv 320 (480)
+++.. .+.+++++...||++|.+. +++.+++|.++|++||+++|+||+|.+|...+. . ...+.. .+...-+.
T Consensus 170 ~~~~~-~~~~~~~~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 247 (404)
T PTZ00376 170 LRTAP-NGSVVLLHACAHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQ 247 (404)
T ss_pred HHhCC-CCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 75432 2345666666778888764 899999999999999999999999998865330 0 111111 11223344
Q ss_pred eeccccc-cCcccccc---ccCHHHHHhhcCC---CccccC-CCcHHHHHHHHHHHHHhh-hhHHHH-------HHHHHH
Q 011669 321 TMAKGIG-NGIPLGAV---VTTPEIAEVLTRR---NYFNTF-GGNPVCTAAGHAVLKVIQ-KDKLQN-------NAHVVG 384 (480)
Q Consensus 321 t~sK~~g-~G~pig~v---~~~~~~~~~l~~~---~~~~t~-~~~~~~~aaa~a~L~~i~-~~~~~~-------~~~~~~ 384 (480)
+|||.++ .|+|+||+ ++++++++.+... ....++ +.+++++.++.++|+.-. .+.+.+ ++++..
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 89999998 5788765544221 112333 346788888887775211 012222 333334
Q ss_pred HHHHHHHHHhHHhcC-ceeeE-eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCcCCCEEEEeCCCCC
Q 011669 385 SYLKERLTALKDKYG-IIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGFYGNVFRITPPLCF 461 (480)
Q Consensus 385 ~~l~~~L~~l~~~~~-~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~iRi~p~~~~ 461 (480)
+.+.+.|+++ ..+ .+... ...|+++|+.+. .++++.|.++ ||.+.|++ ||+.+ ..
T Consensus 328 ~~l~~~L~~~--~~~~~~~~~~p~gg~f~~~~~~-------------~~~~~~L~~~~~v~v~p~~------Ris~~-~~ 385 (404)
T PTZ00376 328 QLLYDELKAL--GSPGDWEHIINQIGMFSFTGLT-------------KEQVERLIEKYHIYLLDNG------RISVA-GL 385 (404)
T ss_pred HHHHHHHHhc--CCCCcccccccCceEEEecCCC-------------HHHHHHHHHhCCEeecCCC------eEEEe-cc
Confidence 4444444332 111 11122 334666777651 3466667765 99998862 88843 27
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 011669 462 TKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 462 t~~~id~~l~~l~~~l~~ 479 (480)
+.+++++++++|++++..
T Consensus 386 ~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 386 TSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred CHHhHHHHHHHHHHHHhc
Confidence 999999999999998754
No 212
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.4e-22 Score=204.81 Aligned_cols=346 Identities=13% Similarity=0.150 Sum_probs=196.8
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHH----h-CCC---C--CCEEEEeCCHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALAS----K-MPG---N--LKVVFFTNSGTE 169 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~----~-~~~---~--~~~v~f~~sGse 169 (480)
..+|+..|.+.. -.++.|.+ +.+.+....++. .....++++++++ . ... . .++|++|+|+++
T Consensus 101 ~~i~l~~g~p~~---~~~~~v~e-~~~~~~~~~Y~~----~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 101 DAVSYVRDQLGF---DADEFVYE-LVDGIIGDNYPV----PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHhhcCCCCCC---CCCHHHHH-HHHHHhcCCCCC----CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 456666665533 23444555 555553221222 2333445554444 2 111 1 248999999999
Q ss_pred HHHHHHHHHH---hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 170 ANELAIMMAR---LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 170 A~~~Alk~ar---~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
|+..++.... ...++++|++.+|+|..+...+..... ++..++++......|..| .++++++
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~-----------~~~~v~v~~~~~~~f~~d----~~~l~~~ 237 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRY-----------DLEVVHINADEENEWQYP----DSELEKL 237 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCC-----------CeEEEEeecCcccCCCCC----HHHHHhh
Confidence 9999987521 234788999999999876554322211 333333332212234444 4667766
Q ss_pred HHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH--hCCEEEEcccccCccccCCCcccccccCCCcceeeecc
Q 011669 247 IDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAK 324 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~--~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK 324 (480)
++ .++++|++...+|++|.+ .+++.+++|.++|++ +|+++|+||+|..|.......... ..+...-+.+|||
T Consensus 238 ~~----~~tkai~l~nP~NPTG~v-~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK 311 (527)
T PRK09275 238 RD----PSIKALFLVNPSNPPSVA-MSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSK 311 (527)
T ss_pred cC----CCCCEEEEeCCcCCcCCC-CCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhh
Confidence 53 356666665556777765 489999999999965 599999999999875311011111 1122233448999
Q ss_pred ccc-cCccccccccCHH-----HHHhh--------------------------------cCCCccccCCCcHHHHHH-HH
Q 011669 325 GIG-NGIPLGAVVTTPE-----IAEVL--------------------------------TRRNYFNTFGGNPVCTAA-GH 365 (480)
Q Consensus 325 ~~g-~G~pig~v~~~~~-----~~~~l--------------------------------~~~~~~~t~~~~~~~~aa-a~ 365 (480)
.++ .|||+||++++++ +++.+ .......|.+.+.+.|.+ ++
T Consensus 312 ~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al 391 (527)
T PRK09275 312 YFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL 391 (527)
T ss_pred hccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHH
Confidence 998 7999999999986 33322 112234566667666665 32
Q ss_pred HH-HHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCcee--eEeccceeEEEEEecCCC---cCCC-----CHHHHHHHH
Q 011669 366 AV-LKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIG--DVRGRGFLLGVEFVTDRQ---LKTP-----AKAETLYIM 433 (480)
Q Consensus 366 a~-L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~g~g~~~~i~~~~~~~---~~~~-----~~~~~~~~~ 433 (480)
.+ ...++. +.+ .+++.+.++++...+.+.++... .....++++++++..-.. .... ......+++
T Consensus 392 ~~~~all~~~~~~---~~~~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~ 468 (527)
T PRK09275 392 FSLFALLDEEDAY---KKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLL 468 (527)
T ss_pred HHHHHHHhCchHH---HHHHHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHH
Confidence 11 111222 233 33333344444444443333211 223445566776632110 0000 000134455
Q ss_pred HHH-HHcCceeeccCcCC---CEEEEeCCCC-CCHHHHHHHHHHHHHHHhh
Q 011669 434 DKM-KEMGVLVGKGGFYG---NVFRITPPLC-FTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 434 ~~l-~~~Gv~v~~~~~~~---~~iRi~p~~~-~t~~~id~~l~~l~~~l~~ 479 (480)
..| .+.||.+.||..|+ +++||+ ++ .+++++.++.++|.+++.+
T Consensus 469 ~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 469 FRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHH
Confidence 555 46799999986664 589999 55 5889999999999988764
No 213
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.90 E-value=5.4e-22 Score=202.53 Aligned_cols=339 Identities=15% Similarity=0.084 Sum_probs=199.2
Q ss_pred EEEeccCCcccccCCCCC--HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCC------CCCCEE--EEeCCHHH
Q 011669 100 RYLDAFGGIATVCCGHCH--PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMP------GNLKVV--FFTNSGTE 169 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~--p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~------~~~~~v--~f~~sGse 169 (480)
..|||..|.....-++.+ +.+.+++.+.++... .....+.....+|++.+++++. .+.++| ++|+|+++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~-~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET-TKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhccccc-CCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 458888876432212333 678888777654321 1111123445556666666541 135565 89999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+..++++.....+++.|++.+++|.++...+...+ ...+++|......|+.| .+++++.++.
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g-------------~~~v~v~~~~~~~~~~d----~~~l~~~~~~ 168 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAG-------------LEVKTYPYYDAATKGLD----FDAMLADLSQ 168 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcC-------------CcEEEEeccccccCccC----HHHHHHHHHh
Confidence 999999765433467899999999988765554332 22233321001113333 5677777764
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc-CCCccc---ccc-cCCCcceeeecc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWG---FEA-HGVVPDIVTMAK 324 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~-G~~~~~---~~~-~~~~pDivt~sK 324 (480)
. ..+..++++...||++|.+ .+++.+++|.++|++||+++|+||+|.+|... +..... +.. .+...-+.+|||
T Consensus 169 ~-~~~~~~~i~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 246 (396)
T PRK09257 169 A-PAGDVVLLHGCCHNPTGAD-LTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSK 246 (396)
T ss_pred C-CCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence 2 2234555556678888876 48999999999999999999999999988643 111111 111 112233448999
Q ss_pred ccc-cCcccccccc---CHHH----HHhhcCCCccccCCCcHHHHHHHHHHHHHhh-h---hHHHHHHHHHHHHHHHHHH
Q 011669 325 GIG-NGIPLGAVVT---TPEI----AEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ-K---DKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 325 ~~g-~G~pig~v~~---~~~~----~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~-~---~~~~~~~~~~~~~l~~~L~ 392 (480)
.++ .|+|+||+++ +++. +..+.........+.+++.+.++.+.|+.-. . ++..+++++..+..++.+.
T Consensus 247 ~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~ 326 (396)
T PRK09257 247 NFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLV 326 (396)
T ss_pred cCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 5999999973 4443 3333222222334457777777777664211 0 1222222222222333333
Q ss_pred HhHHhcC---ceee-EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHH
Q 011669 393 ALKDKYG---IIGD-VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 393 ~l~~~~~---~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~ 468 (480)
+..+++. .+.. ....|+++|+.+. ...+.+.+.++||.+.+. + ||+.+ +.++++|++
T Consensus 327 ~~L~~~~~~~~~~~~~p~gg~~~w~~l~------------~~~~~~l~~~~~V~~~p~----~--ri~~~-~~~~~~i~~ 387 (396)
T PRK09257 327 EALKAKGPSRDFDFIARQRGMFSYSGLT------------PEQVDRLREEFGVYAVGS----G--RINVA-GLNESNIDY 387 (396)
T ss_pred HHHHhcCCCCCcccccccceEEEecCCC------------HHHHHHHHHcCCEEEcCC----C--eEEEe-eCCHHHHHH
Confidence 3333332 1222 3345777888761 133445556789998763 2 88853 489999999
Q ss_pred HHHHHHHHH
Q 011669 469 LVDVMDYSL 477 (480)
Q Consensus 469 ~l~~l~~~l 477 (480)
++++|.+++
T Consensus 388 ~~~~i~~~~ 396 (396)
T PRK09257 388 VAEAIAAVL 396 (396)
T ss_pred HHHHHHhhC
Confidence 999998763
No 214
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.90 E-value=3.7e-21 Score=193.39 Aligned_cols=321 Identities=17% Similarity=0.147 Sum_probs=205.8
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~--~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
.+|.|.+++.+. ..|....| .+...++++.|+++++.+.+ .++++.||+++++.++..... +++++++..++
T Consensus 10 ~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~--~~~~vi~~~~~ 83 (355)
T TIGR03301 10 TSATVRDAMLVD---WCHWDSEF-NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP--RDGKLLVLING 83 (355)
T ss_pred CCHHHHHHhhhh---ccCCCHHH-HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC--CCCeEEEECCC
Confidence 457777777652 22322223 36788999999999875443 688999999999999987543 46778888887
Q ss_pred cccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 194 yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
+++......... .|.+...++... .+..| .+++++.++.. .+++.+++-.+++++|.+.+
T Consensus 84 ~~~~~~~~~a~~-----------~g~~~~~i~~~~--~~~~d----~~~l~~~l~~~--~~~~~v~~~~~~~~~G~~~~- 143 (355)
T TIGR03301 84 AYGERLAKICEY-----------LGIPHTDLNFSE--YEPPD----LNRIEEALAAD--PDITHVATVHHETTTGILNP- 143 (355)
T ss_pred chhhHHHHHHHH-----------cCCceEEEecCC--CCCCC----HHHHHHHHHhC--CCceEEEEEecCCcccchhH-
Confidence 776532111110 122222222111 11123 57788887642 24555655556667788776
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCC----
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN---- 349 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~---- 349 (480)
+++|.++|++||+++|+|++++ +|.. .+.+..+++..-+.+++|+++++.++|++++++++++.+....
T Consensus 144 ---~~~i~~l~~~~~~~livD~~~s-~g~~---~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~ 216 (355)
T TIGR03301 144 ---LEAIAKVARSHGAVLIVDAMSS-FGAI---PIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLY 216 (355)
T ss_pred ---HHHHHHHHHHcCCEEEEEeccc-cCCc---ccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCce
Confidence 8999999999999999999886 5422 2223333443334578899986666799999999888765211
Q ss_pred -------------ccccCCCcHHHHHHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHhHHhcCceee-EeccceeE
Q 011669 350 -------------YFNTFGGNPVCTAAGHAVLKVIQKDK----LQNNAHVVGSYLKERLTALKDKYGIIGD-VRGRGFLL 411 (480)
Q Consensus 350 -------------~~~t~~~~~~~~aaa~a~L~~i~~~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~~-v~g~g~~~ 411 (480)
....++.+..++.++.++|+.+.++. ..++.++..+++++.|+++ .+..+.. ....+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~--g~~~~~~~~~~~~~~~ 294 (355)
T TIGR03301 217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL--GFQPLLPERWQSPIIV 294 (355)
T ss_pred eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc--CCeeecCCCCCCCcEE
Confidence 01234567777788788888775433 4455666667777776654 2211111 12234556
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY-GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
++.+.... .....++.+.|.++||++.++... .+++||++...++++|++++++.|++++
T Consensus 295 ~~~~~~~~------~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 295 SFLYPDDP------DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EEECCCCC------cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 66653211 012457888999999999987532 3689999887889999999999998763
No 215
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=2.2e-20 Score=191.35 Aligned_cols=332 Identities=14% Similarity=0.085 Sum_probs=215.0
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc-c-cccc-----CChHHHHHHHHHHHhCCC-CCCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-S-TVLY-----LNHAIADFAEALASKMPG-NLKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~-~~~~-----~~~~~~~l~e~L~~~~~~-~~~~v~f~~sGse 169 (480)
+..|||..+. |..++.|.+++.+.+.+... . ...+ ..+...+++++|+++++. +.++|+|++|+||
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 4589997653 34678999999888865321 1 1111 134567889999999975 5678999999999
Q ss_pred HHHHHHHHHH--hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++..+++... ...+++.||+.+..||+.......... ..|+....++... .+..| .+++++++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~--~~~~d----~~~l~~~i 161 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCA---------RVGAELRVIPLNP--DGTLQ----LETLPALF 161 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHH---------HcCcEEEEEecCC--CCCCC----HHHHHHhc
Confidence 9998887542 224567899888887764322211110 0133322222111 11122 56777777
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~ 325 (480)
+ +++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|... ++.....+|++++| |.
T Consensus 162 ~----~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~-----~~~~~~~~D~~~~s~~K~ 227 (406)
T PRK09295 162 D----ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHHP-----VDVQALDCDFYVFSGHKL 227 (406)
T ss_pred C----CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCccc-----cCchhcCCCEEEeehhhc
Confidence 4 36788888888899999987 9999999999999999999996 44321 22223456877655 96
Q ss_pred cccCccccccccCHHHHHhhcCCCcc----------------------ccCCCcHHHHHHHHHHHHHhhh---hHHHHHH
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRRNYF----------------------NTFGGNPVCTAAGHAVLKVIQK---DKLQNNA 380 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~~~~----------------------~t~~~~~~~~aaa~a~L~~i~~---~~~~~~~ 380 (480)
+| .-.+|++++++++++.+.....+ .+-..|..+..+..++++.+.+ +...++.
T Consensus 228 ~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 228 YG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred cC-CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 55 23479999999887765421110 1113456677778888887765 3455667
Q ss_pred HHHHHHHHHHHHHhHHhcCceeeE--eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc----------
Q 011669 381 HVVGSYLKERLTALKDKYGIIGDV--RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------- 448 (480)
Q Consensus 381 ~~~~~~l~~~L~~l~~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------- 448 (480)
+++.++++++|.++ +.+.-. ...+.++.+.+.. .....+.+.|.++||.++.|..
T Consensus 307 ~~l~~~l~~~l~~~----~~~~~~~~~~~~~iv~~~~~~---------~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 307 QNLMHYALSQLESV----PDLTLYGPQNRLGVIAFNLGK---------HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHHHHHHhcC----CCEEEeCCCCCceEEEEEECC---------cCHHHHHHHHHhCCeEEeccccchHHHHHHHC
Confidence 77777777776654 212111 1123344444421 0134567788899999976531
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
..+.+|+++....|++|||.++++|+++..
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 125799999999999999999999998753
No 216
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.89 E-value=5.8e-21 Score=192.79 Aligned_cols=319 Identities=15% Similarity=0.099 Sum_probs=205.0
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC--CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~--~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
.++.|.+++.++. .|.. ........++++.|+++++... +.|++++|||++++.++..... +++++|+..++
T Consensus 14 ~~~~v~~~~~~~~---~~~~-~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~--~~~~vlv~~~~ 87 (363)
T TIGR02326 14 TSRTVKEAMLFDW---CTWD-SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP--KDGKLLVVING 87 (363)
T ss_pred CCHHHHHHhCCCC---CCCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC--CCCeEEEEeCC
Confidence 4566776655433 1211 1234566788999999997653 3799999999999999976532 55677777777
Q ss_pred cccccccc-cccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeC
Q 011669 194 YHGNAAGT-MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (480)
Q Consensus 194 yhG~~~~~-~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 272 (480)
+|+..... ... .|+....++....+. .| .++++++++.. .+++.+.+-.+++++|.+.+
T Consensus 88 ~~~~~~~~~a~~------------~g~~~~~v~~~~~~~--~d----~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~ 147 (363)
T TIGR02326 88 AYGARIVQIAEY------------LGIPHHVVDTGEVEP--PD----VVEVEAILAAD--PAITHIALVHCETTTGILNP 147 (363)
T ss_pred hhhHHHHHHHHH------------cCCceEEEeCCCCCC--CC----HHHHHHHHhhC--CCccEEEEEeecCCccccCc
Confidence 77653211 111 122222222211111 12 67888888642 24556666667788898887
Q ss_pred CCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCccccccccCHHHHHhhcCCC-
Q 011669 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRN- 349 (480)
Q Consensus 273 ~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~- 349 (480)
+++|.++|++||+++|+|++|+ +|... .....+ .+|++ +++|+++++.++|+++++++.++.+....
T Consensus 148 ----i~~I~~l~~~~g~~livD~~~~-~g~~~---~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~ 217 (363)
T TIGR02326 148 ----IEAVAKLAHRHGKVTIVDAMSS-FGGIP---IDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNAR 217 (363)
T ss_pred ----HHHHHHHHHHcCCEEEEEcccc-ccCcc---cchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCC
Confidence 9999999999999999999986 55322 222333 45666 56799987667899999998877653211
Q ss_pred -----------------ccccCCCcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCceeeE-ecc
Q 011669 350 -----------------YFNTFGGNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGR 407 (480)
Q Consensus 350 -----------------~~~t~~~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~ 407 (480)
....|..++..+.+..++|+.+.++ +..++.+++.+++++.|+++ .+..+... ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~ 295 (363)
T TIGR02326 218 SLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL--GFEPLLDDEIQS 295 (363)
T ss_pred ceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCC
Confidence 0123456677777777788776443 34566777777777777665 22222111 112
Q ss_pred ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY-GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 408 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+.+.++.+.... ......+.+.|.++||.+.++..+ .+.+||++....+.+|+++++++|++++.
T Consensus 296 ~~~~~~~~~~~~------~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 296 PIITSFYSPEDP------DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred ceEEEEECCCCC------CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 344555542210 012456888899999999987533 47899997666899999999999999875
No 217
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=3.5e-21 Score=193.65 Aligned_cols=291 Identities=13% Similarity=0.131 Sum_probs=185.9
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
..|+.....+|++++++.++.+.++|++|+|++|++..+++.... .+++.|++.+++|..+...+...
T Consensus 55 ~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~-~g~d~vlv~~P~y~~y~~~~~~~----------- 122 (354)
T PRK04635 55 NRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE-PGQDSIACFGPTYGMYAISAETF----------- 122 (354)
T ss_pred ccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC-CCCCeEEEcCCChHHHHHHHHHc-----------
Confidence 346655678999999999988888999999999999999986542 23378999999997654432211
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|+..+.+|.. ..|..| .+.++. + .++++|++...+|++|.+. +.+.+++|.+.|+ ++++|+||
T Consensus 123 --g~~v~~v~~~--~~~~~~----~~~l~~-~-----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDe 185 (354)
T PRK04635 123 --NVGVKALPLT--ADYQLP----LDYIEQ-L-----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDE 185 (354)
T ss_pred --CCEEEEEecC--CCCCCC----HHHHHh-c-----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeC
Confidence 3333333321 122223 334432 2 2566666667788888876 4455555555544 59999999
Q ss_pred cccCccccCCCcccc-cccCCCcceeeeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh
Q 011669 296 VQAGFARTGSHFWGF-EAHGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373 (480)
Q Consensus 296 v~tgfgr~G~~~~~~-~~~~~~pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~ 373 (480)
+|..|.... ..... ..++...-+.||||.+| +|+|+||+++++++++.+.... ..++.+...+.++.++|+....
T Consensus 186 ay~~~~~~~-s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~ 262 (354)
T PRK04635 186 AYIEFCPEY-SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVI--APYPVPLPVSEIATQALSEAGL 262 (354)
T ss_pred chHhhccCc-chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhcccH
Confidence 998875221 11111 11111112348999999 8999999999999998876432 3466677777777777752111
Q ss_pred hHH---HHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--
Q 011669 374 DKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-- 448 (480)
Q Consensus 374 ~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-- 448 (480)
+.+ .+++++.++++.+.|++ ++.+...++.|.|+++.+.. ...+.+.|.++||.+..++.
T Consensus 263 ~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~~~-----------~~~~~~~l~~~gv~v~~~~~~~ 327 (354)
T PRK04635 263 ARMKFQVLDLNAQGARLQAALSM----YGGAKVLEGNGNYVLAKFDD-----------VDAVFKALWDAGIVARAYKDPR 327 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----CCCceECCCCCcEEEEECCC-----------HHHHHHHHHHCCEEEEECCCCC
Confidence 222 22333333444444443 34233345568888887621 34577888999999976532
Q ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 449 YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 449 ~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
..+++||+. .+++|++.++++|++-
T Consensus 328 ~~~~lRis~---~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 328 LANCIRFSF---SNRAETDKLIGLIRNQ 352 (354)
T ss_pred CCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 246899993 4899999999999764
No 218
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=2.1e-20 Score=189.45 Aligned_cols=320 Identities=18% Similarity=0.184 Sum_probs=203.4
Q ss_pred CCCCHHHHHHHHHHHHhccccccccC-------ChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhh-cCC
Q 011669 114 GHCHPYVVDSIVNQIKRIQHSTVLYL-------NHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLY-TGC 184 (480)
Q Consensus 114 Gh~~p~v~~A~~~~~~~~~~~~~~~~-------~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~-~~~ 184 (480)
|-.++.+.+++.+.+...+-....+. .....++++.++++++.+ .+++++++|+++|++.+++.+... .++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g 88 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPG 88 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCC
Confidence 45679999999888765422111111 234567889999998765 568999999999999999876431 145
Q ss_pred ceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccC
Q 011669 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQ 264 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~ 264 (480)
++|++.++.|.+.......... ..|.....++.... +..| .+++++.++ +++++|++..++
T Consensus 89 ~~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~~--~~~d----~~~l~~~l~----~~~~~v~~~~~~ 149 (373)
T cd06453 89 DEIVTSVMEHHSNIVPWQQLAE---------RTGAKLKVVPVDDD--GQLD----LEALEKLLT----ERTKLVAVTHVS 149 (373)
T ss_pred CEEEECcchhHHHHHHHHHHHh---------hcCcEEEEeecCCC--CCcC----HHHHHHHhc----CCceEEEEeCcc
Confidence 6788877776543211111100 01222222221111 1112 577877775 267888888888
Q ss_pred CCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHH
Q 011669 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIA 342 (480)
Q Consensus 265 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~ 342 (480)
+++|.+.+ +++|.++|++||+++|+|++|+ +|... ++.....+|++++| |.+++ .++|+++++++++
T Consensus 150 ~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~~-----~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~ 218 (373)
T cd06453 150 NVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHMP-----VDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELL 218 (373)
T ss_pred cccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCcee-----eeccccCCCEEEeccccccCC-CCcEEEEEchHHh
Confidence 88998876 8999999999999999999986 33221 22223457898888 99987 6789999999988
Q ss_pred HhhcCCCccc------------------cC---CCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhc
Q 011669 343 EVLTRRNYFN------------------TF---GGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKY 398 (480)
Q Consensus 343 ~~l~~~~~~~------------------t~---~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~ 398 (480)
+.+.....+. .| ..|..+..+..++++.+.++ ...++.+++.+++++.|+++. .+
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~ 297 (373)
T cd06453 219 EEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP-GV 297 (373)
T ss_pred hcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-Ce
Confidence 7766422110 01 23344555556667766654 344555555566655555431 01
Q ss_pred CceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc----------CCCEEEEeCCCCCCHHHHHH
Q 011669 399 GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF----------YGNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 399 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------~~~~iRi~p~~~~t~~~id~ 468 (480)
..+......+.++.+.+.. ....++.+.|+++||.+.++.. ..+++|+++...+|++|+|+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~ 368 (373)
T cd06453 298 RVYGDAEDRAGVVSFNLEG---------IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDA 368 (373)
T ss_pred EEeCCccccCCeEEEEECC---------cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHH
Confidence 1111222345566666521 1245788899999999876532 14689999999999999999
Q ss_pred HHHHH
Q 011669 469 LVDVM 473 (480)
Q Consensus 469 ~l~~l 473 (480)
++++|
T Consensus 369 ~~~~l 373 (373)
T cd06453 369 LVEAL 373 (373)
T ss_pred HHhhC
Confidence 99864
No 219
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=5.2e-21 Score=192.58 Aligned_cols=317 Identities=16% Similarity=0.161 Sum_probs=203.4
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCc
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~y 194 (480)
.+++|.+|+.+.+.. +... ...+...++++.+++.++.+ .+.+++++||++|+..+++... .+++.|++..+++
T Consensus 10 ~~~~v~~a~~~~~~~--~~~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--~~g~~vl~~~~~~ 84 (356)
T cd06451 10 VPPRVLKAMNRPMLG--HRSP-EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--EPGDKVLVGVNGV 84 (356)
T ss_pred CCHHHHHHhCCCccC--CCCH-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--CCCCEEEEecCCc
Confidence 468888888653321 1111 12344678999999999763 3468899999999999998653 3567888888777
Q ss_pred ccccc-cccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 195 HGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 195 hG~~~-~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
++... ......+. .+..++... .+..| .+++++.++. .++++|++..+++++|.+.+
T Consensus 85 ~~~~~~~~~~~~g~----------~~~~v~~~~----~~~~~----~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 85 FGDRWADMAERYGA----------DVDVVEKPW----GEAVS----PEEIAEALEQ---HDIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred hhHHHHHHHHHhCC----------CeEEeecCC----CCCCC----HHHHHHHHhc---cCCCEEEEeccCCCcccccC-
Confidence 65321 11111111 122222211 11223 5677777753 25677777777788898876
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCccccccccCHHHHHhhcC--CC
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTR--RN 349 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~--~~ 349 (480)
+++|.++|+++|+++|+|++|. +|.. .+....++ +|++ +.+|.++++.++|+++.++++++.+.. ..
T Consensus 143 ---~~~i~~~a~~~~~~li~D~~~~-~g~~---~~~~~~~~--~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~ 213 (356)
T cd06451 143 ---LEGIGALAKKHDALLIVDAVSS-LGGE---PFRMDEWG--VDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKP 213 (356)
T ss_pred ---HHHHHHHHHhcCCEEEEeeehh-ccCc---cccccccC--ccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCC
Confidence 9999999999999999999986 5432 22222233 4555 456999987788999999998877652 11
Q ss_pred --c---------------cccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEecc-c
Q 011669 350 --Y---------------FNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR-G 408 (480)
Q Consensus 350 --~---------------~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~-g 408 (480)
. +...+.++..+++..++++.+..+ ...++.+++.+++++.|+++ .+.......+. +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 291 (356)
T cd06451 214 KGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL--GLKLLAKPELRSP 291 (356)
T ss_pred CceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCcccCCC
Confidence 0 111223455566777888776543 45566677777777777764 22222211111 2
Q ss_pred eeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCc--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGF--YGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 409 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~--~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+.++.+.. ......+.+.|.++ ||.+.++.. .+++||+++...+|++|+++++++|+++++
T Consensus 292 ~~~~~~~~~--------~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 292 TVTAVLVPE--------GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ceEEEECCC--------CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 233443311 11246788899998 999987532 246899999999999999999999999874
No 220
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.89 E-value=1.2e-20 Score=179.46 Aligned_cols=316 Identities=18% Similarity=0.218 Sum_probs=225.6
Q ss_pred CCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHH-HHhhcCCceEEE
Q 011669 116 CHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM-ARLYTGCNDIIS 189 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~-ar~~~~~~~ii~ 189 (480)
.||+|.+|+.+.+++.+-.. -.+.+....+|.++|+++.. .+..++.+|..-||+..|.. ++.. .+-+|.
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--K~aALlFsSCfVANDstLftLak~l--pgcei~ 261 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--KEAALLFSSCFVANDSTLFTLAKKL--PGCEIF 261 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--CcceeeeeeeeeccchHHHHHHHHC--CCcEEe
Confidence 47999999999999864321 13456778899999999984 34566778888899988864 4443 235667
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
.+.+.|......+..++.+.+.+.+ || +++|+++++...+...+.|-.|.+.++.|.
T Consensus 262 SD~gNHASMI~GIrns~v~K~IFrH-------------------ND----~~hL~~lL~~~~~svPKivAFEtVhSM~Ga 318 (570)
T KOG1360|consen 262 SDEGNHASMIQGIRNSRVPKHIFRH-------------------ND----LDHLEQLLQSSPKSVPKIVAFETVHSMDGA 318 (570)
T ss_pred ccccchHHHHHHhhhcCCcceeecc-------------------CC----HHHHHHHHHhCCCCCCceEEEeeeeccCCC
Confidence 7888888777766666554444332 45 688999998776667899999999999999
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc-ccccCC--Cccee--eecccccc-CccccccccCHHHHH
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGV--VPDIV--TMAKGIGN-GIPLGAVVTTPEIAE 343 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-~~~~~~--~pDiv--t~sK~~g~-G~pig~v~~~~~~~~ 343 (480)
+.| |++|.++++|||++-.+|||+. .|-.|++.-+ -+..|+ ..||+ |++|+||. | |||..+..+++
T Consensus 319 vcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvD 390 (570)
T KOG1360|consen 319 VCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVD 390 (570)
T ss_pred cCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhhhHHH
Confidence 998 9999999999999999999996 5555532222 245566 46777 69999994 4 67999999998
Q ss_pred hhcCCC--ccccCCCcHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecC
Q 011669 344 VLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD 418 (480)
Q Consensus 344 ~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~ 418 (480)
.++... +..|-+-+|..++.|++++++++.++ +...-++..+++++.|.++ .+|.+ .....++-+.+
T Consensus 391 miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~--GiPVi---~~pSHIiPv~v--- 462 (570)
T KOG1360|consen 391 MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL--GIPVI---PNPSHIIPVRV--- 462 (570)
T ss_pred HHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc--CCccc---CCCcceeeeec---
Confidence 887643 34566778999999999999987652 2233344445555555544 22322 12222222222
Q ss_pred CCcCCCCHHHHHHHHHHHH-HcCceeecc-----CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 419 RQLKTPAKAETLYIMDKMK-EMGVLVGKG-----GFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 419 ~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.....++...|. ++||++..- ......+||.|.-.+|.+.++.+++.+..++.+
T Consensus 463 -----gda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 463 -----GDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred -----cCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 23344566677665 579998542 122468999999999999999999999988765
No 221
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=1.9e-21 Score=201.01 Aligned_cols=350 Identities=11% Similarity=0.077 Sum_probs=193.2
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHH-HHHHhCC---CCCC--EEEEeCCHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAE-ALASKMP---GNLK--VVFFTNSGTEANEL 173 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e-~L~~~~~---~~~~--~v~f~~sGseA~~~ 173 (480)
..+++..|.+. ...|+++.++.+.+....+.......+...++++ .+.+.+. ...+ +|++|+|+++|+..
T Consensus 95 ~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~ 170 (521)
T TIGR03801 95 DIISYVIDQLG----FDPDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCY 170 (521)
T ss_pred HHHhhcCCCCC----CCCCHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 34555555443 3456777777776532212112222233444443 2233322 1223 79999999999999
Q ss_pred HHHHHH---hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCC-----CCCChHHHHHHHHH
Q 011669 174 AIMMAR---LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGV-----FGADGEMYAKDVQD 245 (480)
Q Consensus 174 Alk~ar---~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~-----~~~d~~~~~~~le~ 245 (480)
++.... ...++++|++.+|+|..+........ .++..++++...... |..| .+++++
T Consensus 171 ~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~-----------~g~~vv~i~~~~~~~~g~~~~~~d----~~~l~~ 235 (521)
T TIGR03801 171 IFDSLKANELLKKGDKIALMTPIFTPYLEIPELPR-----------YDFEVVRIKADEMTEDGTHTWQYP----DKELEK 235 (521)
T ss_pred HHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhc-----------CCcEEEEeecccccccccccCCCC----HHHHHH
Confidence 887521 23467899999999977554332211 123333322211111 4333 456666
Q ss_pred HHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh--CCEEEEcccccCccccCCCcccccccCCCcceeeec
Q 011669 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA 323 (480)
Q Consensus 246 ~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s 323 (480)
+++ .++++|++...+|++|.+ .+++.+++|.++|++| |+++|+||+|..|.......... ..+...-+.+||
T Consensus 236 ~~~----~~~kai~l~nP~NPTG~v-ls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfS 309 (521)
T TIGR03801 236 LRD----PSIKALFVVNPSNPPSVA-MSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFS 309 (521)
T ss_pred hcC----CCCcEEEEeCCCCCCCCC-CCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcch
Confidence 553 356666654445666765 4888999999999987 99999999998774311011111 111222244799
Q ss_pred cccc-cCccccccccCHH-----HH--------Hhhc------------------------CCCccccCCCcHHHHH--H
Q 011669 324 KGIG-NGIPLGAVVTTPE-----IA--------EVLT------------------------RRNYFNTFGGNPVCTA--A 363 (480)
Q Consensus 324 K~~g-~G~pig~v~~~~~-----~~--------~~l~------------------------~~~~~~t~~~~~~~~a--a 363 (480)
|.++ .|||+||++++++ ++ +.+. ......|.+.+...+. +
T Consensus 310 K~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~a 389 (521)
T TIGR03801 310 KYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMA 389 (521)
T ss_pred hhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHH
Confidence 9998 7999999999865 22 1111 1112245555555444 2
Q ss_pred HHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHhHHhcCcee--eEeccceeEEEEEecCCC---cCCCC-----HHHHHHH
Q 011669 364 GHAVLKVIQK-DKLQNNAHVVGSYLKERLTALKDKYGIIG--DVRGRGFLLGVEFVTDRQ---LKTPA-----KAETLYI 432 (480)
Q Consensus 364 a~a~L~~i~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~g~g~~~~i~~~~~~~---~~~~~-----~~~~~~~ 432 (480)
..++...++. +.+.+ ++.+.++++...+.+.++... .....|.++++++..-.. ..... .....++
T Consensus 390 l~a~~all~~~~~y~~---~~~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~ 466 (521)
T TIGR03801 390 LFSLFALMDKENAYKA---ETKDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV 466 (521)
T ss_pred HHHHHHHhccchhHHH---HHHHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence 1122222222 23333 333344444444444443321 223445677777742110 00000 0012345
Q ss_pred HHHH-HHcCceeeccCcCC---CEEEEeCCCC-CCHHHHHHHHHHHHHHHhh
Q 011669 433 MDKM-KEMGVLVGKGGFYG---NVFRITPPLC-FTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 433 ~~~l-~~~Gv~v~~~~~~~---~~iRi~p~~~-~t~~~id~~l~~l~~~l~~ 479 (480)
+..| .+.||.+.||..|+ +++||+ ++ .+++++.++.++|.+.+.+
T Consensus 467 ~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 467 LFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred HHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHHH
Confidence 5554 56799999986654 579999 55 6899999999999988754
No 222
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=1.2e-20 Score=191.83 Aligned_cols=329 Identities=19% Similarity=0.148 Sum_probs=205.5
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc-ccc-----cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS-TVL-----YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~~~-----~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~ 173 (480)
.|||..+. |..++.|.+++.+.+...+.. ... .......++++.++++++.+.++|+|++|++|++..
T Consensus 2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHH
Confidence 47775433 456799999999877653211 111 112456788899999998777899999999999999
Q ss_pred HHHHHHhh--cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 174 AIMMARLY--TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 174 Alk~ar~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
++..+... .+++.|++....|+........+.. .|+....+|... .+..| .+++++.++
T Consensus 76 ~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~--~~~~d----~~~l~~~l~--- 136 (381)
T PRK02948 76 AIQSLLNALPQNKKHIITTPMEHASIHSYFQSLES----------QGYTVTEIPVDK--SGLIR----LVDLERAIT--- 136 (381)
T ss_pred HHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHh----------CCCEEEEEeeCC--CCCCC----HHHHHHhcC---
Confidence 99876432 2345555544333332222211110 122222222111 11123 567777664
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccc-c
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIG-N 328 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g-~ 328 (480)
+++++|+++.+++++|.+.+ +++|.++|+++|+++|+|++|+ ||..+ ...+.++ .|++ +++|.+| .
T Consensus 137 -~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~---~~~~~~~--~d~~~~s~~K~~gp~ 205 (381)
T PRK02948 137 -PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP---IDVFEMG--IDSLSVSAHKIYGPK 205 (381)
T ss_pred -CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc---cCcccCC--CCEEEecHHhcCCCC
Confidence 35678989999999999987 8999999999999999998885 66433 1122333 5555 6779876 2
Q ss_pred CccccccccCHHH-HHhhcCC----CccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 329 GIPLGAVVTTPEI-AEVLTRR----NYFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 329 G~pig~v~~~~~~-~~~l~~~----~~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
| +|++++++++ +..+... .....++.|..+.+++.++|+.+.+ ++..++++++.+++++.|+++ .+. +
T Consensus 206 G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~-v 280 (381)
T PRK02948 206 G--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL--PLP-I 280 (381)
T ss_pred c--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCC-E
Confidence 4 6888888764 1111100 0113345678888888888876533 345566677777777776665 111 1
Q ss_pred eeEecc-----ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------------------CCCEEEE
Q 011669 402 GDVRGR-----GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------------------YGNVFRI 455 (480)
Q Consensus 402 ~~v~g~-----g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi 455 (480)
. ..+. ..++.+.+.. ....++...|.++||.++.+.. ..+++||
T Consensus 281 ~-~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRi 350 (381)
T PRK02948 281 E-VEGHSTSCLPHIIGVTIKG---------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRF 350 (381)
T ss_pred E-EeCCCccCcCCEEEEEeCC---------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEE
Confidence 1 1111 1122233211 0134566678889999986531 1368999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 456 TPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 456 ~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++...+|++|+|++++.|++++++
T Consensus 351 s~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 351 SFGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988764
No 223
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=2.6e-20 Score=189.41 Aligned_cols=337 Identities=15% Similarity=0.095 Sum_probs=204.2
Q ss_pred ccCCCCCHHHHHHHHHHHHhccc------cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCC
Q 011669 111 VCCGHCHPYVVDSIVNQIKRIQH------STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC 184 (480)
Q Consensus 111 ~~lGh~~p~v~~A~~~~~~~~~~------~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~ 184 (480)
.-+|..++++++|+.+....... .......+...++++.++++++. +.++|++||++|+..+++... .++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--~~~~~~~g~t~a~~~al~~l~--~~g 102 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--DEARVTHGAREGKFAVMHSLC--KKG 102 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhc--CCC
Confidence 44678899999999987754222 11123356789999999999964 568899999999999998764 366
Q ss_pred ceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc---CCCceEEEEEc
Q 011669 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG---TSGHVAGFLSE 261 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~---~~~~~a~vi~e 261 (480)
++|++.++++.+.... +... |+....+|......+..| .+++++.++.. ..+++++|+++
T Consensus 103 d~Vlv~~~~h~s~~~~-~~~~------------G~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 103 DYVVLDGLAHYTSYVA-AERA------------GLNVREVPKTGYPEYKIT----PEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred CEEEECCCchHHHHHH-HHHc------------CCEEEEEeCccCcCCCcC----HHHHHHHHHHhhhccCCCCEEEEEE
Confidence 7788877665543322 2221 233222222100112223 56777777532 11368899999
Q ss_pred ccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHH
Q 011669 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEI 341 (480)
Q Consensus 262 pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~ 341 (480)
.+++++|.+.+ +++|.++|++||+++|+|++|+ +|..+ +....+++...+.+++|+++++.++|++++++++
T Consensus 166 ~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~---~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~ 237 (387)
T PRK09331 166 HVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP---VDGKKLGADFIVGSGHKSMAASAPSGVLATTEEY 237 (387)
T ss_pred CCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC---CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHH
Confidence 88888998877 9999999999999999999996 44322 1122334444445678999987899999999998
Q ss_pred HHhhcCCCccc------cCC--CcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 342 AEVLTRRNYFN------TFG--GNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 342 ~~~l~~~~~~~------t~~--~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
++.+....... .++ .++...++.+++++.+.+. +..++..+..+++++.|.++. .+.....-.....++.
T Consensus 238 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~-g~~~~~~~~~~~~i~~ 316 (387)
T PRK09331 238 ADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE-GFKQLGEKPRNHDLMK 316 (387)
T ss_pred HhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEeccCcCcCCeEE
Confidence 88765432100 011 2233444455566544332 233344555666666666541 1111110011223333
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
++...-.............+.+.|+++||...+.+ .+..+|+.. +.+|++|++.++++|++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~-~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 317 FETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG-ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred EeCCchhHHhhhccccchhHHHHHHHcCceEEccC-CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 33210000000001123568889999999854332 245567765 458999999999999998764
No 224
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=4.9e-20 Score=188.28 Aligned_cols=326 Identities=17% Similarity=0.175 Sum_probs=201.4
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccc-cccccC-----ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYL-----NHAIADFAEALASKMPGNLKVVFFTNSGTEANE 172 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~-----~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~ 172 (480)
..|||..+. |-.++.+.+++.+.+..... ....|. .+...++++.++++++.+.++|++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 488886433 34678999999998865321 111122 234678999999999866667999999999998
Q ss_pred HHHHHHHh-hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 173 LAIMMARL-YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 173 ~Alk~ar~-~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
.++..... ..++++|++.++.|++.......... ..|+....++.... .+..| .+++++.++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~~~~~~~~~~-~~~~~----~~~l~~~i~--- 154 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAE---------RAGAKVKWARVDEA-TGELH----PDDLASLLS--- 154 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHH---------hcCCEEEEEecccc-CCCcC----HHHHHHhcC---
Confidence 77765432 34567888888777654322111100 01222222221110 01122 567777774
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccC
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNG 329 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G 329 (480)
+++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|. .|. . ..... +..+|++ +++|.+ |
T Consensus 155 -~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~-~--~~~~~--~~~~d~~~~s~~K~~--g 221 (397)
T TIGR01976 155 -PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APH-G--LIDVQ--ATGADFLTCSAYKFF--G 221 (397)
T ss_pred -CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-ccc-c--CCCHH--HcCCCEEEEechhhc--C
Confidence 36788888888888998876 9999999999999999999985 331 1 11122 2346766 566987 4
Q ss_pred ccccccccCHHHHHhhcCCCccccC----------CCcHHHHHHHHHHHHHhhhhH-----------------HHHHHHH
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTF----------GGNPVCTAAGHAVLKVIQKDK-----------------LQNNAHV 382 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~----------~~~~~~~aaa~a~L~~i~~~~-----------------~~~~~~~ 382 (480)
.|+|++++++++++.+.+......+ ..|....++..++++.+.+.+ ..++..+
T Consensus 222 ~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (397)
T TIGR01976 222 PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENR 301 (397)
T ss_pred CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHH
Confidence 5789999999988777643211111 123344555556666654321 2333444
Q ss_pred HHHHHHHHHHHhHHhcCceeeE-----eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------
Q 011669 383 VGSYLKERLTALKDKYGIIGDV-----RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--------- 448 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v-----~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------- 448 (480)
+.+++++.|+++ +.+..+ ...+.++.+.+.. .....+.+.|.++||.+..+..
T Consensus 302 l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~ 368 (397)
T TIGR01976 302 LAEYLLVGLSDL----PGVTLYGVARLAARVPTVSFTVHG---------LPPQRVVRRLADQGIDAWAGHFYAVRLLRRL 368 (397)
T ss_pred HHHHHHHHHhcC----CCEEEeCCCCccCCCceEEEEeCC---------cCHHHHHHHHHHCCeEEEeCccchHHHHHHh
Confidence 555555555443 322211 1134444444311 1135688889999999986521
Q ss_pred ----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 449 ----YGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 449 ----~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
..+++||++...+|++|+++++++|
T Consensus 369 ~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 369 GLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 2368999999999999999999864
No 225
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=1e-20 Score=188.95 Aligned_cols=322 Identities=20% Similarity=0.129 Sum_probs=199.6
Q ss_pred eccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc
Q 011669 103 DAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT 182 (480)
Q Consensus 103 D~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~ 182 (480)
||++.. .+| .+|++.+++.+.+... ...++.+...++++.++++++ .+.++++++|++|+..+++... .
T Consensus 1 ~~~~~~---~~~-~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~--~ 69 (338)
T cd06502 1 DFRSDT---VTG-PTPEMLEAMAAANVGD---DVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT--Q 69 (338)
T ss_pred Cccccc---CCC-CCHHHHHHHHhcccCC---cccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc--C
Confidence 455443 345 7899999998765321 123456788999999999987 4678899999999999998654 3
Q ss_pred CCceEEEEcCCcccccccc--cccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCceEE
Q 011669 183 GCNDIISLRNAYHGNAAGT--MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAG 257 (480)
Q Consensus 183 ~~~~ii~~~~~yhG~~~~~--~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~a~ 257 (480)
+++.|++..++|....... ... .|+....++.. .+..| .++++++++... ..++++
T Consensus 70 ~gd~v~~~~~~~~~~~~~~~~~~~------------~g~~~~~v~~~---~~~~d----~~~l~~~i~~~~~~~~~~~~~ 130 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGAPEFL------------SGVKLLPVPGE---NGKLT----PEDLEAAIRPRDDIHFPPPSL 130 (338)
T ss_pred CCCeEEEecCcceeeecCCcHHHH------------cCceEEeecCC---CCcCC----HHHHHHHhhccCCCcCCcceE
Confidence 5677777666553222111 011 13333333221 12223 567777775311 125677
Q ss_pred EEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcc--ccCCCcccccccCCCccee--eeccccccCcccc
Q 011669 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA--RTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLG 333 (480)
Q Consensus 258 vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfg--r~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig 333 (480)
|++++.++.||.. +.+.+++|.++|++||+++|+||+|..+. ..| . ........+|++ +++|.++. +.|
T Consensus 131 v~l~~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~-~--~~~~~~~~~d~~~~s~sK~~~~--~~g 203 (338)
T cd06502 131 VSLENTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALG-V--ALKTYKSGVDSVSFCLSKGGGA--PVG 203 (338)
T ss_pred EEEEeecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcC-C--CHHHHHhcCCEEEEeccccCCC--ccc
Confidence 7777666665533 77789999999999999999999874221 122 1 111112234544 67899873 225
Q ss_pred c-cccCHHHHHhhcCCC--ccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEecccee
Q 011669 334 A-VVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410 (480)
Q Consensus 334 ~-v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~ 410 (480)
+ +++++++++.+.... ++++++.+++.+++++++|+.-...+..++..++.+++.+.|+++ +. ......+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~ 278 (338)
T cd06502 204 AVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GG-LESEVQTNI 278 (338)
T ss_pred eEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CC-CcccccCCe
Confidence 4 557888888775432 234566677777888877763112334566666677777777664 22 112233445
Q ss_pred EEEEEecCCCcCCCCHHHHHHHHHHHH---HcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 411 LGVEFVTDRQLKTPAKAETLYIMDKMK---EMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
..+.+.. .......+.+.+. ++|+++.+.+ .+++||+|++.+|++|++++++++++
T Consensus 279 ~~v~~~~-------~~~~~~~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 279 VLLDPVE-------ANAVFVELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred EEEecCC-------ccHHHHHHHHHHHHhhhCCEEEEecC--CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4444311 1112233444443 7899998764 37899999999999999999999875
No 226
>PLN02397 aspartate transaminase
Probab=99.88 E-value=1.1e-20 Score=194.10 Aligned_cols=335 Identities=16% Similarity=0.109 Sum_probs=185.5
Q ss_pred EEeccCCc-ccccCCCCCHHHHHHHHHHHHhc---cccccccCChHHHHHHHHHHHhCCCC------CCEE--EEeCCHH
Q 011669 101 YLDAFGGI-ATVCCGHCHPYVVDSIVNQIKRI---QHSTVLYLNHAIADFAEALASKMPGN------LKVV--FFTNSGT 168 (480)
Q Consensus 101 ylD~~~g~-~~~~lGh~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~l~e~L~~~~~~~------~~~v--~f~~sGs 168 (480)
.|++..|. .+. +.+|.+.+++.+..... .......+.....+|++.+++++... .++| ..+.+|+
T Consensus 50 ~l~l~~g~~p~~---~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 50 KLNLGVGAYRTE---EGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred eEecccceeeCC---CCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 46666653 332 34455555555543221 11111223455667777777765211 1233 1134444
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
.+.++++.+.....+++.|++.+|+|.++...+.... ...+++|......|+.| .+.+++.+.
T Consensus 127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g-------------~~~~~v~l~~~~~~~~d----~~~l~~~l~ 189 (423)
T PLN02397 127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAG-------------VPVRTYRYYDPKTRGLD----FDGLLEDLK 189 (423)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcC-------------CeEEEeecccCcCCccC----HHHHHHHHH
Confidence 4444333333333377899999999977655544332 22222221101113334 455555554
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC--Cccc---ccccC-CCcceeee
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS--HFWG---FEAHG-VVPDIVTM 322 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~--~~~~---~~~~~-~~pDivt~ 322 (480)
.. ..++.++++...+|++|.+. +.+.+++|.++|++||+++|+||+|.+|...+. .... +...+ ...-+.+|
T Consensus 190 ~~-~~~~~~i~~~~P~NPTG~v~-s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~Sf 267 (423)
T PLN02397 190 AA-PDGSFVLLHACAHNPTGVDP-TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSY 267 (423)
T ss_pred hC-CCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEEC
Confidence 32 23566777666778888764 888999999999999999999999999965330 1111 11111 12223379
Q ss_pred ccccc-cCccccccc---cCHHHHHhhc----CCCccccCCCcHHHHHHHHHHHHHhh-hhHH-------HHHHHHHHHH
Q 011669 323 AKGIG-NGIPLGAVV---TTPEIAEVLT----RRNYFNTFGGNPVCTAAGHAVLKVIQ-KDKL-------QNNAHVVGSY 386 (480)
Q Consensus 323 sK~~g-~G~pig~v~---~~~~~~~~l~----~~~~~~t~~~~~~~~aaa~a~L~~i~-~~~~-------~~~~~~~~~~ 386 (480)
||.++ .|||+||++ .++++++.+. .......++.+.+++.++.++|+.-. .+.+ .+++++..+.
T Consensus 268 SK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~ 347 (423)
T PLN02397 268 AKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQK 347 (423)
T ss_pred cccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 799999984 3566544332 22222334556677777777664211 0122 2333444444
Q ss_pred HHHHHHHhHHhcCceeeE-eccceeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccCcCCCEEEEeCCCCCCHH
Q 011669 387 LKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGGFYGNVFRITPPLCFTKE 464 (480)
Q Consensus 387 l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~iRi~p~~~~t~~ 464 (480)
+.+.|+++.... .+..+ +..|+++|+.+. ..+++.| .+.||.+.++ + ||+.. +.+++
T Consensus 348 l~~~L~~~~~~~-~~~~~~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~~----~--Ri~~~-~~~~~ 406 (423)
T PLN02397 348 LYDALEARGSPG-DWSHITKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTRD----G--RISMA-GLSSK 406 (423)
T ss_pred HHHHHHhcCCCC-CCCcccCCceEEEecCCC-------------HHHHHHHHHhCCEEECCC----C--eEEEe-eCCHH
Confidence 444444431000 12222 344566677651 2355555 5679999643 2 88842 38999
Q ss_pred HHHHHHHHHHHHHh
Q 011669 465 DADYLVDVMDYSLS 478 (480)
Q Consensus 465 ~id~~l~~l~~~l~ 478 (480)
.+++++++|++++.
T Consensus 407 ~i~~~~~~i~~~~~ 420 (423)
T PLN02397 407 NVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 227
>PRK08637 hypothetical protein; Provisional
Probab=99.88 E-value=2.1e-20 Score=190.36 Aligned_cols=304 Identities=13% Similarity=0.097 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHhC----C----CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 142 AIADFAEALASKM----P----GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 142 ~~~~l~e~L~~~~----~----~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...+|++.+++.+ + .+.++|++|+|+++|+..++++... +++.|++.+|+|..+........
T Consensus 45 G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~-------- 114 (388)
T PRK08637 45 GIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD--QGDTVLLPDHNWGNYKLTFNTRR-------- 114 (388)
T ss_pred CCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHhc--------
Confidence 3455555555443 1 1235789999999999998886553 67889999999977665322221
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH-----hC
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK-----AG 288 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~-----~g 288 (480)
|...+.+|... ..++-| ++++++.++...++...++++...+|++|.+ .+++.+++|.++|++ ||
T Consensus 115 ----g~~vv~v~~~~-~~~~~d----~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~-~s~~~~~~l~~~~~~~~~~~~~ 184 (388)
T PRK08637 115 ----GAEIVTYPIFD-EDGGFD----TDALKEALQAAYNKGKVIVILNFPNNPTGYT-PTEKEATAIVEAIKELADAGTK 184 (388)
T ss_pred ----CCEEEEecccC-CCCcCC----HHHHHHHHHhhccCCCEEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHHHhcCCc
Confidence 22233332210 011112 5677777652112233445454457777765 588999999999886 99
Q ss_pred CEEEEcccccCccccCCCccc-cc-ccCCCcc---ee--eeccccc-cCccccccccC------HHHHHhhcCCC----c
Q 011669 289 GLCIADEVQAGFARTGSHFWG-FE-AHGVVPD---IV--TMAKGIG-NGIPLGAVVTT------PEIAEVLTRRN----Y 350 (480)
Q Consensus 289 illI~DEv~tgfgr~G~~~~~-~~-~~~~~pD---iv--t~sK~~g-~G~pig~v~~~------~~~~~~l~~~~----~ 350 (480)
+++|+||+|.+|-+.+...-. +. ..+...+ +. ++||.++ .|+|+||++.+ +++++.+.... .
T Consensus 185 ~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~ 264 (388)
T PRK08637 185 VVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIR 264 (388)
T ss_pred EEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhh
Confidence 999999999988655521111 11 1122223 22 7899987 79999999854 67776664311 1
Q ss_pred cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH---HhHHhcC---ceeeEe-ccceeEEEEEecCCCcCC
Q 011669 351 FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT---ALKDKYG---IIGDVR-GRGFLLGVEFVTDRQLKT 423 (480)
Q Consensus 351 ~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~---~l~~~~~---~~~~v~-g~g~~~~i~~~~~~~~~~ 423 (480)
...++.|.++++++.+.|+ +..+.+++++..+.++++.. +....++ .+...+ ..|+++|+.+.
T Consensus 265 ~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~------- 334 (388)
T PRK08637 265 SNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK------- 334 (388)
T ss_pred cccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC-------
Confidence 1334678889998888774 34455555554444444432 3332331 122223 45778888772
Q ss_pred CCHHHHHHHHHHHH-HcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 424 PAKAETLYIMDKMK-EMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 424 ~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
.....++++.|+ ++||.+...+ .+++||+... .+++++++++++|.++++++
T Consensus 335 --~~~~~~l~~~l~~~~gv~~~~~~--~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 335 --GVDAEELRVHLLEKYGIGTIALN--ETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred --hHHHHHHHHHHhhhcceEEEecc--CCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 123466788875 6799887543 5689999653 68999999999999998753
No 228
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=1.2e-20 Score=188.08 Aligned_cols=321 Identities=17% Similarity=0.151 Sum_probs=198.3
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
.|||.++..+ | .+|.+.+|+.+..... ..| +.+...+|.++|+++++ .+.+++++||++++..++....
T Consensus 1 ~~~~~~~~~~---~-p~~~~~~a~~~~~~~~----~~Y~~~~~~~~L~~~la~~~g--~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVT---R-PSRAMLEAMMAAPVGD----DVYGDDPTVNALQDYAAELSG--KEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCC---C-CCHHHHHHHHhccCCC----cccCCCHHHHHHHHHHHHHhC--CCeEEEeCchHHHHHHHHHHhc
Confidence 3788877654 4 7899999987644332 345 68889999999999985 4556799999999988887543
Q ss_pred hhcCCceEEEEcCCccc-ccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC--CCceE
Q 011669 180 LYTGCNDIISLRNAYHG-NAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT--SGHVA 256 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG-~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~--~~~~a 256 (480)
.++++|++..++|.. +........+ +...+.++.. ..|..| .+++++.+.... ..+++
T Consensus 71 --~~gd~vi~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~d----~~~l~~~i~~~~~~~~~~~ 131 (333)
T PRK10534 71 --ERGEEYIVGQAAHNYLYEAGGAAVLG-----------SIQPQPIDAA--ADGTLP----LDKVAAKIKPDDIHFARTR 131 (333)
T ss_pred --CCCCeeEEechhhhhHhcCCchHHhc-----------CceEEeecCC--CCCCCC----HHHHHHhhcccCcCcccce
Confidence 255777776655531 1111001110 1222222211 123233 566777664210 01456
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc---CCCcccccccCCCc-ceeeeccccccCccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART---GSHFWGFEAHGVVP-DIVTMAKGIGNGIPL 332 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~---G~~~~~~~~~~~~p-Divt~sK~~g~G~pi 332 (480)
+|+++.++ +|.+. +.+.+++|.++|++||+++|+||+|. |+.. + .... ......+ -+++|||+++. ++
T Consensus 132 lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~-~~~~-~~~~~~~~~~~s~SK~~~~--~~ 203 (333)
T PRK10534 132 LLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYG-CELK-EITQYCDSFTICLSKGLGT--PV 203 (333)
T ss_pred EEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcC-CCHH-HHHhcCCEEEEEeEcCCCC--cc
Confidence 66666322 47664 77788999999999999999999986 4321 2 1110 0001111 24589998764 57
Q ss_pred c-ccccCHHHHHhhcCCCccc--cCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccce
Q 011669 333 G-AVVTTPEIAEVLTRRNYFN--TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (480)
Q Consensus 333 g-~v~~~~~~~~~l~~~~~~~--t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 409 (480)
| |+++++++++.+....... .++.+.++++++.++|+.. ....++..+.++++.+.|+++ ++ ....+.+.
T Consensus 204 G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~-~~~~~~~n 276 (333)
T PRK10534 204 GSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GA-DVMRQDTN 276 (333)
T ss_pred cceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CC-ccCCCCce
Confidence 8 5888999988876533211 2233456677777777532 222333334455666666654 32 22344677
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
|+++.+.. .....+.+.|+++||++.++. .+|+...+.+|++++++++++|++.+.
T Consensus 277 fv~~~~~~---------~~~~~~~~~l~~~gi~v~~~~----~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 277 MLFVRVGE---------EQAAALGEYMRERNVLINASP----IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EEEEECCc---------hhHHHHHHHHHHcCeeecCCc----eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 88776621 124567888999999998753 578876556899999999999998765
No 229
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.87 E-value=3.1e-19 Score=182.76 Aligned_cols=332 Identities=17% Similarity=0.147 Sum_probs=210.7
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc---c----CChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL---Y----LNHAIADFAEALASKMPGN-LKVVFFTNSGTEA 170 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~---~----~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA 170 (480)
..|||..+. |-.++.|.+++.+.+......... + ......++++.++++++.+ .++|+|++|++++
T Consensus 19 ~~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~ 92 (403)
T TIGR01979 19 LVYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTES 92 (403)
T ss_pred eEEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHH
Confidence 368886432 445788999998876543211111 1 1234568889999999865 5689999999999
Q ss_pred HHHHHHHHH--hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 171 NELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 171 ~~~Alk~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
+..++..+. ...+++.|++.++.|++.......... ..|+....++.... +..| .+++++.++
T Consensus 93 l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~---------~~g~~~~~v~~~~~--~~~~----~~~l~~~i~ 157 (403)
T TIGR01979 93 INLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAE---------RTGATLKFIPLDDD--GTLD----LDDLEKLLT 157 (403)
T ss_pred HHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHH---------hcCcEEEEEecCCC--CCCC----HHHHHHHhc
Confidence 998887642 124567888887777653322111110 01332222221111 1112 567777774
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eecccc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGI 326 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~ 326 (480)
+++++|++..+++.+|.+.+ +++|.++|++||+++|+|++|. +|.. . ++.....+|++ +++|.+
T Consensus 158 ----~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~---~--~~~~~~~~d~~~~s~~K~~ 223 (403)
T TIGR01979 158 ----EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM---P--VDVQALDCDFYVFSGHKMY 223 (403)
T ss_pred ----cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc---c--cCccccCCCEEEEeccccc
Confidence 36788888888888998887 9999999999999999999996 3321 1 12222346776 456977
Q ss_pred ccCccccccccCHHHHHhhcCCCcc-----------cc-------C---CCcHHHHHHHHHHHHHhhh---hHHHHHHHH
Q 011669 327 GNGIPLGAVVTTPEIAEVLTRRNYF-----------NT-------F---GGNPVCTAAGHAVLKVIQK---DKLQNNAHV 382 (480)
Q Consensus 327 g~G~pig~v~~~~~~~~~l~~~~~~-----------~t-------~---~~~~~~~aaa~a~L~~i~~---~~~~~~~~~ 382 (480)
| +..+|++++++++.+.+.+...+ .. | ..+..+.++..++++.+.+ +.+.++..+
T Consensus 224 g-p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 224 G-PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred C-CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 5 33478999999887766431110 00 1 2344556666777776654 345666677
Q ss_pred HHHHHHHHHHHhHHhcCceeeEe-----ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------
Q 011669 383 VGSYLKERLTALKDKYGIIGDVR-----GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--------- 448 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~-----g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------- 448 (480)
+.+++++.|+++ +.+..+. .++.++.+.+... ...++.+.|.++||.+.++..
T Consensus 303 l~~~l~~~l~~~----~g~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 369 (403)
T TIGR01979 303 LTAYALERLGEI----PGLRIYGPRDAEDRGGIISFNVEGV---------HPHDVGTILDEEGIAVRSGHHCAQPLMRRF 369 (403)
T ss_pred HHHHHHHHHhcC----CCEEEeCCCCccccCceEEEEeCCc---------CHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence 777776666554 2222111 1255666665211 134577888999999976421
Q ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 -YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 -~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+++||+++..+|++|+++++++|+++++.
T Consensus 370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 370 GVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999988765
No 230
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.1e-19 Score=181.60 Aligned_cols=332 Identities=19% Similarity=0.191 Sum_probs=227.2
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---c----cccccCChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---H----STVLYLNHAIADFAEALASKMPGN-LKVVFFTNSGTEA 170 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~----~~~~~~~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA 170 (480)
-.|+|..++ +..+..|.+++.+...... | ..........++.+++++++++.+ .++|+||.+.|+|
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred eEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 468887654 3578899999998776431 2 111222446688999999999877 4889999999999
Q ss_pred HHHHHHHHH-hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 171 NELAIMMAR-LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 171 ~~~Alk~ar-~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
+........ ...++++||+.+--+|........+... .|......|....+.+ + .++++++++
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~---------~Ga~v~~i~~~~~g~~--~----~~~~~~~i~- 160 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR---------TGAKVRVIPLDDDGLL--D----LDALEKLIT- 160 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh---------cCcEEEEEecCCCCCc--C----HHHHHHhcC-
Confidence 999888542 2335689999988888776655554421 1333322222111111 1 566777663
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g 327 (480)
+++++|.+..+.+.+|.+.| +++|.++|+++|+++++|-+|+ ++. ..++......|++.|| |++.
T Consensus 161 ---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h-----~~idv~~l~~Df~afsgHKwl~ 227 (405)
T COG0520 161 ---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGH-----LPIDVQELGCDFLAFSGHKWLL 227 (405)
T ss_pred ---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCc-----cCCCchhcCCCEEEEccccccc
Confidence 58999999999999999998 9999999999999999999997 332 2245556678999998 8887
Q ss_pred cCccccccccCHHHHHhhcCCCcc------------ccC----------CCcHHHHHHHHHHHHHhhh---hHHHHHHHH
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRNYF------------NTF----------GGNPVCTAAGHAVLKVIQK---DKLQNNAHV 382 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~~~------------~t~----------~~~~~~~aaa~a~L~~i~~---~~~~~~~~~ 382 (480)
|.-.+|.+.+++++.+.+.+...+ .++ ..|..+..+..++++.+.+ +++.++.++
T Consensus 228 gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~ 307 (405)
T COG0520 228 GPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERE 307 (405)
T ss_pred CCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHH
Confidence 767789999999999887542111 111 1133334444466666554 345566666
Q ss_pred HHHHHHHHHHHhHHhcCceeeEe----ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC---------
Q 011669 383 VGSYLKERLTALKDKYGIIGDVR----GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY--------- 449 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~----g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--------- 449 (480)
+.+++.++|+++ +.+.-.. .++.++.+.+... ....+...|.++||.++.+...
T Consensus 308 L~~~~~~~L~~~----~~v~i~g~~~~~r~~~vsF~v~~~---------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 308 LTEYLLEGLSEL----PGVEIYGPPDADRGGIVSFNVKGI---------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHHHHHHhcC----CCeEEecCCcccCceEEEEEeCCC---------CHHHHHHHHHhCCeEEEeccccccHHHHhcC
Confidence 666666666655 3222111 2455555554221 2467899999999888776211
Q ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 450 -GNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 450 -~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
...+|+++.+..|++|||+++++|+++.+
T Consensus 375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 375 VDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 12399999999999999999999998763
No 231
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.87 E-value=1.4e-19 Score=186.57 Aligned_cols=336 Identities=15% Similarity=0.137 Sum_probs=211.4
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc---ccccC----ChHHHHHHHHHHHhCCCC-CCEEEEeCCHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS---TVLYL----NHAIADFAEALASKMPGN-LKVVFFTNSGTE 169 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~---~~~~~----~~~~~~l~e~L~~~~~~~-~~~v~f~~sGse 169 (480)
+..|||..+. |-.++.|.+++.+.+.+.... ...+. .....++++.|+++++.. .++|+|++|+|+
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 3578886332 345688999998877654211 11111 233568889999999864 468999999999
Q ss_pred HHHHHHHHHH--hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMAR--LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar--~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++..+++... ...+++.|++.+..|++.......... ..|+....++.... ...| .+++++.+
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~---------~~g~~v~~v~~~~~--~~~~----~~~l~~~i 170 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQ---------KTGAVLKFVGLTPD--EVLD----VEQLKELL 170 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHH---------HcCCEEEEEecCCC--CCcC----HHHHHHHh
Confidence 9999887531 234567888888777653322211110 01222222221111 1112 56777777
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~ 325 (480)
+ .++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|. +|... ++.....+|++ ++.|.
T Consensus 171 ~----~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~~-----~~~~~~~~d~~~~s~~K~ 236 (424)
T PLN02855 171 S----EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHMP-----VDVQTLGADFLVASSHKM 236 (424)
T ss_pred c----cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCcC-----CCchhcCCCEEEeecccc
Confidence 4 26788899999999999987 8999999999999999999995 44321 22223346776 56794
Q ss_pred cccCccccccccCHHHHHhhcCCCcc--------------------ccC-CCcHHHHHHHHHHHHHhhh---hHHHHHHH
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRRNYF--------------------NTF-GGNPVCTAAGHAVLKVIQK---DKLQNNAH 381 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~~~~--------------------~t~-~~~~~~~aaa~a~L~~i~~---~~~~~~~~ 381 (480)
+| .-++|++++++++++.+.+...+ ... ..|..+.++..++++.+.+ ++..++..
T Consensus 237 ~g-p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 237 CG-PTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred cC-CCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 43 33589999999988776532100 001 1344555566677776654 34556666
Q ss_pred HHHHHHHHHHHHhHHhcCceee----EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCc--------
Q 011669 382 VVGSYLKERLTALKDKYGIIGD----VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGF-------- 448 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~~~~~~~----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~-------- 448 (480)
++.+++++.|+++. ....+.. ...++.++.+.+... ....+.+.|.++ ||.++.+..
T Consensus 316 ~l~~~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~~~~~~~---------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~ 385 (424)
T PLN02855 316 ELGTYLYEKLSSVP-GVRIYGPKPSEGVGRAALCAFNVEGI---------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRY 385 (424)
T ss_pred HHHHHHHHHHhcCC-CEEEeCCCcccccCcccEEEEEECCc---------CHHHHHHHhcccCCEEEechhhhhHHHHHH
Confidence 77777777665541 1111111 112244555555211 135688888877 999886431
Q ss_pred --CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 --YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 --~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+.+|+++++..|++||+.++++|+++++.
T Consensus 386 ~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 386 LGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred hCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1357999999999999999999999998764
No 232
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=4.2e-19 Score=179.87 Aligned_cols=317 Identities=19% Similarity=0.155 Sum_probs=198.2
Q ss_pred CCHHHHHHHHHHHHhccccccccC--ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh----cCCceEEE
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY----TGCNDIIS 189 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~--~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~----~~~~~ii~ 189 (480)
.+|.+.+++.+.+.........++ .....+++++|+++++.+.+.+++++||++++..++..++.. .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 568888888776554322122233 244578999999999866567889999999999998876532 23467888
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
.+++|+++...+ ... |+....++... .+..| .+++++.++. +.++.+++.| ++++|.
T Consensus 112 ~~~~h~~~~~~~-~~~------------G~~~~~v~~~~--~~~~d----~~~l~~~l~~---~~~~vv~~~~-~~~tG~ 168 (373)
T TIGR03812 112 PESAHFSFEKAA-EML------------GLELRYAPLDE--DYTVD----VKDVEDLIDD---NTIGIVGIAG-TTELGQ 168 (373)
T ss_pred CCcchHHHHHHH-HHc------------CCeEEEEeeCC--CCCcC----HHHHHHHHhh---CcEEEEEECC-CCCCCc
Confidence 887776543221 111 22222222111 12123 5778777753 2345666665 567788
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCcccc----CCCcccccccCCCcceeeec--cccccCccccccc-cCHHHH
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFART----GSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVV-TTPEIA 342 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~----G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~-~~~~~~ 342 (480)
+.+ +++|.++|++||+++|+|++|.++-.. |......+..-...|.++++ |...++.|.|+++ .++++.
T Consensus 169 ~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~ 244 (373)
T TIGR03812 169 IDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYL 244 (373)
T ss_pred cCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHH
Confidence 766 999999999999999999999754210 00000111111134555544 7333567888665 577777
Q ss_pred HhhcCCCcc--cc------CCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeE
Q 011669 343 EVLTRRNYF--NT------FGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411 (480)
Q Consensus 343 ~~l~~~~~~--~t------~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~ 411 (480)
+.+...... .. ...++..++++.++|+.+.++ +..++..++.++++++|+++ +......+...++
T Consensus 245 ~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v 320 (373)
T TIGR03812 245 KYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIV 320 (373)
T ss_pred hhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEE
Confidence 766422111 10 123456777788888877554 45677777888888877775 2211122333344
Q ss_pred EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 412 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.+.+ +. ...+.+.|.++||++..+. ..+++||+++..+|++|+|.++++|++
T Consensus 321 ~~~~--------~~---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 321 AFEV--------DD---PEEVRKKLRDRGWYVSVTR-CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEe--------CC---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 4433 11 2468888999999997653 356899999888999999999999975
No 233
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.87 E-value=6.1e-20 Score=187.45 Aligned_cols=323 Identities=14% Similarity=0.107 Sum_probs=209.6
Q ss_pred CCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 115 HCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
+-+++|++|+.+.. ..|.. ....+...+++++++++++.+. +.+++++||+++++.++.... .++++|++.+++
T Consensus 19 ~~~~~V~~a~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--~~Gd~Vlv~~~~ 93 (401)
T PLN02409 19 NIPERVLRAMNRPN--EDHRS-PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--SPGDKVVSFRIG 93 (401)
T ss_pred CCCHHHHHHhcCCC--CCCCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--CCCCEEEEeCCC
Confidence 34678888775533 12322 2234567788888888887653 578999999999999987543 367899999988
Q ss_pred cccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 194 yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
|++.....+.. ..|+....++..+... .| .+++++.++.....++++|++..+.+++|.+.+
T Consensus 94 ~~~~~~~~~~~-----------~~g~~v~~v~~~~~~~--~~----~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~- 155 (401)
T PLN02409 94 QFSLLWIDQMQ-----------RLNFDVDVVESPWGQG--AD----LDILKSKLRQDTNHKIKAVCVVHNETSTGVTND- 155 (401)
T ss_pred chhHHHHHHHH-----------HcCCceEEEECCCCCC--CC----HHHHHHHHhhCcCCCccEEEEEeecccccccCC-
Confidence 87643211100 0122222222211111 12 577888886421136788888888888999887
Q ss_pred CChHHHHHHH--HHHhCCEEEEcccccCccccCCCcccccccCCCcceee--eccccccCccccccccCHHHHHhhcCCC
Q 011669 274 PGYLPAVYKS--IKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNGIPLGAVVTTPEIAEVLTRRN 349 (480)
Q Consensus 274 ~~~l~~l~~l--~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~G~pig~v~~~~~~~~~l~~~~ 349 (480)
+++|.++ |+++|+++|+|++|+ +|.. . ++..+...|+++ .+|+++++.++|+++.++++++.+....
T Consensus 156 ---~~~i~~l~~~~~~g~~~vvD~v~s-~g~~---~--id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~ 226 (401)
T PLN02409 156 ---LAGVRKLLDCAQHPALLLVDGVSS-IGAL---D--FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAK 226 (401)
T ss_pred ---HHHHHHHHhhhccCcEEEEEcccc-cCCc---c--ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCC
Confidence 8999999 999999999999997 5321 1 222233456664 5699987778999999999888765421
Q ss_pred ----c-----------cc---cCCCcHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhcCceeeE-ec-
Q 011669 350 ----Y-----------FN---TFGGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYGIIGDV-RG- 406 (480)
Q Consensus 350 ----~-----------~~---t~~~~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g- 406 (480)
. .+ .++.|...+.+..++|+.+.+ ++..++.+++.+++++.|+++ .+..+... ..
T Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~--g~~~~~~~~~~~ 304 (401)
T PLN02409 227 SPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW--GLKLCTKKPEWR 304 (401)
T ss_pred CCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCeeccCChhhc
Confidence 0 01 234455667777788887755 355677777777887777665 22222211 11
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHH-HHcCceeeccC-c-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKM-KEMGVLVGKGG-F-YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~-~-~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.+.++.+.. ......+.+.| .+.|+.+..|. . .+..|||+....++++++..++++|++++.+
T Consensus 305 s~~v~~~~~p~--------~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 305 SDTVTAVVVPE--------GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred ccceEEEeCCC--------CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 22344454421 11234566655 46799998763 2 3678999999999999999999999999875
No 234
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.87 E-value=7.4e-20 Score=184.55 Aligned_cols=329 Identities=14% Similarity=0.100 Sum_probs=196.3
Q ss_pred CCCCHHHHHHHHHHHHhccccc------cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceE
Q 011669 114 GHCHPYVVDSIVNQIKRIQHST------VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDI 187 (480)
Q Consensus 114 Gh~~p~v~~A~~~~~~~~~~~~------~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~i 187 (480)
|+..|++.+++.+.......+. ....++...++.+++++.++. +++++++||++++..++..... +++.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~--~gd~V 86 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCE--KGDWV 86 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcC--CCCEE
Confidence 6788999999988664332211 112246788999999999965 7899999999999999986533 56778
Q ss_pred EEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC---CCceEEEEEcccC
Q 011669 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT---SGHVAGFLSESIQ 264 (480)
Q Consensus 188 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~---~~~~a~vi~epi~ 264 (480)
++.+++|++.... ... .|+..+.++......|..| .+++++.++... ..++++|++...+
T Consensus 87 l~~~~~~~~~~~~-~~~------------~g~~~~~v~~~~~~~~~~d----~~~l~~~l~~~~~~~~~~~~lv~l~~p~ 149 (361)
T cd06452 87 VVDGLAHYTSYVA-AER------------AGLNVREVPNTGHPEYHIT----PEGYAEVIEEVKDEFGKPPALALLTHVD 149 (361)
T ss_pred EEcCCcchHHHHH-HHh------------cCCEEEEEecCCCCCcccC----HHHHHHHHHHHhhccCCCceEEEEECCC
Confidence 8877776554321 111 1333333322211112233 566777665311 1257788887778
Q ss_pred CCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHh
Q 011669 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV 344 (480)
Q Consensus 265 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~ 344 (480)
+++|.+.+ +++|.++|+++|+++|+||+|. +|... +....++....+.+++|++++|.|+|++++++++++.
T Consensus 150 n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~---~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~ 221 (361)
T cd06452 150 GNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRMP---VSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADI 221 (361)
T ss_pred CCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCcC---CCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHH
Confidence 88887765 9999999999999999999996 43221 2222334433445788999977799999999999888
Q ss_pred hcCCCcc------ccCCC--cHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhHHhcCceeeE---eccceeEE
Q 011669 345 LTRRNYF------NTFGG--NPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTALKDKYGIIGDV---RGRGFLLG 412 (480)
Q Consensus 345 l~~~~~~------~t~~~--~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v---~g~g~~~~ 412 (480)
+...... ..+++ ++..+++++++++.+.+. +...+..+..+++++.|+++ +.+... .+...++.
T Consensus 222 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l----~g~~v~~~~~~~~n~~~ 297 (361)
T cd06452 222 VFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKI----EGIKQLGEKPKNHDLMF 297 (361)
T ss_pred HhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEECCCCCCCceEE
Confidence 7553211 11111 122344445555543211 11122222335565555544 212111 22333444
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
++...-.............+.+.|+++||.+...+. ++++|++.. ..++++++.++++|+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~-~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 298 FETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGL-TRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEcCCcchhhhhccccchhHHHHHHHcCceEEcCCC-ceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 443100000000001123588899999999644332 457899863 379999999999999765
No 235
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.87 E-value=1.3e-19 Score=185.53 Aligned_cols=334 Identities=18% Similarity=0.127 Sum_probs=198.7
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc--cc----CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV--LY----LNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~----~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA 170 (480)
++..|||..+ +|-.++.|.+++.+.+........ .+ ......+..+++ ++++.+.++|+|++|+|++
T Consensus 26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~ 98 (406)
T TIGR01814 26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTIN 98 (406)
T ss_pred CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHH
Confidence 4457888433 233478899999877765321111 11 111222333445 7777777889999999999
Q ss_pred HHHHHHHHHhhcCCc-eEEEEcCCcccccccccc-cccCCCccccccCCCeeE----ecCCCCcCCCCCCChHHHHHHHH
Q 011669 171 NELAIMMARLYTGCN-DIISLRNAYHGNAAGTMG-ATAQSNWKFNVVQTGVHH----ALNPDPYRGVFGADGEMYAKDVQ 244 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~-~ii~~~~~yhG~~~~~~~-~~~~~~~~~~~~~~g~~~----~~~p~~~~~~~~~d~~~~~~~le 244 (480)
+..++.......+++ .|++.+..|. .....+. .... .|+.. ...+... .+..| .++++
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~-s~~~~~~~~~~~---------~g~~~~~~~~~~~~~~--~g~~~----~~~l~ 162 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFP-SDHYAIESQLQL---------HGLTVEESMVQIEPRE--EETLR----LEDIL 162 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCC-hHHHHHHHHHHh---------cCCCcccceEEeccCC--CCccC----HHHHH
Confidence 999988652211223 4554445554 3222221 1000 01111 1111100 00112 46777
Q ss_pred HHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeee--
Q 011669 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM-- 322 (480)
Q Consensus 245 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~-- 322 (480)
+.++.. .+++++|+++.+++.+|.+.+ +++|.++|++||+++|+|++|+ +|.. .+..+. ..+|++++
T Consensus 163 ~~~~~~-~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~---~id~~~--~gvD~~~~s~ 231 (406)
T TIGR01814 163 DTIEKN-GDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV---PLDLHD--WGVDFACWCT 231 (406)
T ss_pred HHHHhc-CCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc---cccccc--CCCCEEEEcC
Confidence 777543 247899999999999999988 9999999999999999999997 5432 222333 34566654
Q ss_pred ccccccCccccccccCHHHHHhhcCCCcc-------------c----------cCCCcHHHHHHHHHHHHHhhh---hHH
Q 011669 323 AKGIGNGIPLGAVVTTPEIAEVLTRRNYF-------------N----------TFGGNPVCTAAGHAVLKVIQK---DKL 376 (480)
Q Consensus 323 sK~~g~G~pig~v~~~~~~~~~l~~~~~~-------------~----------t~~~~~~~~aaa~a~L~~i~~---~~~ 376 (480)
-|.+++|.. |+++..++....+.+...+ . ..+.|..++++..++|+.+.+ +..
T Consensus 232 hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i 310 (406)
T TIGR01814 232 YKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEAL 310 (406)
T ss_pred ccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHH
Confidence 599987644 4444443333223221100 0 112345677777778888755 456
Q ss_pred HHHHHHHHHHHHHHHHHhHH---hcCcee--eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCC
Q 011669 377 QNNAHVVGSYLKERLTALKD---KYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGN 451 (480)
Q Consensus 377 ~~~~~~~~~~l~~~L~~l~~---~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 451 (480)
.++.+++.+++++.|+++.. .+.++. ....++.++.+.+. . ....+.+.|.++||++...+ .+
T Consensus 311 ~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~---------~~~~~~~~L~~~gi~v~~~~--~~ 378 (406)
T TIGR01814 311 RKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V---------PGKAVFQALIKRGVIGDKRE--PS 378 (406)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C---------CHHHHHHHHHHCCEEEeccC--CC
Confidence 67777777787777766421 011111 11223445555542 0 13568888999999886432 46
Q ss_pred EEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 011669 452 VFRITP-PLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 452 ~iRi~p-~~~~t~~~id~~l~~l~~~l 477 (480)
.+||+| ++.+|++|||.++++|++++
T Consensus 379 ~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 379 VIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred eEEEechhccCCHHHHHHHHHHHHHHh
Confidence 899999 68899999999999999875
No 236
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.86 E-value=1.9e-19 Score=183.00 Aligned_cols=327 Identities=19% Similarity=0.155 Sum_probs=195.2
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHH---HhCCC-CCCEEEEeCCHHHHHHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALA---SKMPG-NLKVVFFTNSGTEANEL 173 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~---~~~~~-~~~~v~f~~sGseA~~~ 173 (480)
|||..++. ..++.|.+++.+.+.... +....|.......+.+.++ +.++. +.++|+|++|++|++..
T Consensus 2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 67765543 356899999998887532 1111222233344444444 34443 45789999999999999
Q ss_pred HHHHHHh----hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 174 AIMMARL----YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 174 Alk~ar~----~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
+++.+.. ..+++.|++....|+........+.. .|+....+|....+. .| .+++++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~----------~G~~v~~v~~~~~g~--~d----~~~l~~~i~- 138 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLES----------LGVEVTYLPINEQGT--IT----AEQVREAIT- 138 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHH----------CCCEEEEEecCCCCC--CC----HHHHHHhcc-
Confidence 9986531 12345677766554433322211110 123322222211111 12 567777774
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g 327 (480)
+++++|++..+++++|.+.+ +++|.++|++||+++|+|++|. +|.. . ++.....+|++++| |.+|
T Consensus 139 ---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~---~--~~~~~~~~D~~~~s~~K~~g 205 (382)
T TIGR03403 139 ---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI---P--VDVQKAGVDFLSFSAHKFHG 205 (382)
T ss_pred ---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC---c--cCccccCCCEEEEcchhhCC
Confidence 25678888888899999887 8999999999999999999986 4321 1 22223457888777 9654
Q ss_pred cCccccccccCHHHHHhhcCCC-------ccccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhc
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRN-------YFNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKY 398 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~-------~~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 398 (480)
...+|+++.+++.. +.+.. ....+..|..++.++.++++.+.+ +...++.+++.++++++|.++
T Consensus 206 -p~G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~---- 278 (382)
T TIGR03403 206 -PKGVGGLYIRKGVE--LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL---- 278 (382)
T ss_pred -CCceEEEEECCCCC--CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----
Confidence 22357776665431 11110 012334566777777777776543 223345555555555555443
Q ss_pred CceeeEecc----ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------------------CCCEE
Q 011669 399 GIIGDVRGR----GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------------------YGNVF 453 (480)
Q Consensus 399 ~~~~~v~g~----g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~i 453 (480)
+.+..+... +.++.+.+... ....+...|.++||.++.|.. .++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~i 349 (382)
T TIGR03403 279 PDVFVVGDREHRVPNTILISIKGV---------EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAI 349 (382)
T ss_pred CCEEEECCCCCCcCCEEEEEeCCC---------CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeE
Confidence 333222211 23444444210 134566678899999986421 12579
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 454 RITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 454 Ri~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
|+++...+|++|||+++++|++++++
T Consensus 350 R~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 350 RLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988764
No 237
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=4.1e-19 Score=181.68 Aligned_cols=328 Identities=15% Similarity=0.124 Sum_probs=199.3
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccc-------cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL-------YLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~ 171 (480)
+.|||..+.. ..++.|.+++.+.+......... ...+...+++++|++.++.+.++|+|++|+|+++
T Consensus 4 ~~yld~aa~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAATT------PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcCC------CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 4789976542 45799999998877543211110 1124567788999999987777899999999999
Q ss_pred HHHHHHHHhh--cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 172 ELAIMMARLY--TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 172 ~~Alk~ar~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
+.+++.+... .+++.|++....|+........+.. .|+....+|.... +..| .+++++.++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~~--~~~d----~~~l~~~l~- 140 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLER----------EGFEVTYLPPKSN--GLID----LEELKAAIR- 140 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHh----------cCCEEEEEccCCC--CcCC----HHHHHHhcC-
Confidence 9998866432 3456676666554432222111110 1222222221111 1112 567777764
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g 327 (480)
+++++|++..+++++|.+.+ +++|.++|++||+++|+|++|+ +|.. .++..+..+|++++| |.+|
T Consensus 141 ---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~-----~~~~~~~~~D~~~~s~~K~~g 207 (402)
T TIGR02006 141 ---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI-----PINVNELKVDLMSISGHKIYG 207 (402)
T ss_pred ---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc-----ccCccccCCCEEEEehhhhcC
Confidence 35788999999999999887 9999999999999999999996 4422 133335678999988 9654
Q ss_pred cCccccccccCHHHHHhhcCCCcc-------ccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhc
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRNYF-------NTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKY 398 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~~~-------~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~ 398 (480)
...+|+++++++....+.....+ .....+....++..++|+.+++ +...++.+++.+++++.|+++
T Consensus 208 -p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~---- 282 (402)
T TIGR02006 208 -PKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI---- 282 (402)
T ss_pred -CCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----
Confidence 34578888887644333322111 1122344555555577877654 233455666666666666543
Q ss_pred Cceee-----EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------------------CCCE
Q 011669 399 GIIGD-----VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------------------YGNV 452 (480)
Q Consensus 399 ~~~~~-----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~ 452 (480)
+.+.- .+..+ .+.+.|... + ...+...+ +|+.++.|.. ..+.
T Consensus 283 ~~v~~~~~~~~~~p~-~~~v~f~~~-----~----~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~ 350 (402)
T TIGR02006 283 EEVYLNGDLEHRVPG-NLNVSFNYV-----E----GESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSS 350 (402)
T ss_pred CCEEEeCCccccCCC-eEEEEEeCc-----C----HHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCce
Confidence 22211 11111 112333211 0 12333333 4665544310 1368
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 453 FRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 453 iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+|+++...+|++|||++++.|+++++.
T Consensus 351 vR~S~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 351 IRFTIGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988753
No 238
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=2.4e-19 Score=184.77 Aligned_cols=331 Identities=15% Similarity=0.110 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccc
Q 011669 119 YVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (480)
Q Consensus 119 ~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~ 198 (480)
.+.+++.+++....+ ....+....+|+++++++++ .+.+++|+||++|+..++..... +++ ||..++.|..+.
T Consensus 58 a~~~a~~~a~~~g~~--~Y~~~~g~~~Lreaia~~~~--~~~vv~t~ggt~A~~~~~~all~--pGD-Vii~~p~~~~~~ 130 (460)
T PRK13238 58 AMSDRQWAAMMRGDE--AYAGSRSYYRLEDAVKDIFG--YPYTIPTHQGRAAEQILFPVLIK--KGD-VVPSNYHFDTTR 130 (460)
T ss_pred hhhHHHHHHHHhCCc--ccCCCCCHHHHHHHHHHHhC--CCcEEECCCHHHHHHHHHHHhCC--CCC-EEccCCcccchH
Confidence 577777777754321 12235678899999999995 46799999999999999876533 556 888888775544
Q ss_pred ccccccccCCCccccccCCCeeEecCCCC---c-CCCCC--CChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeC
Q 011669 199 AGTMGATAQSNWKFNVVQTGVHHALNPDP---Y-RGVFG--ADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (480)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~g~~~~~~p~~---~-~~~~~--~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 272 (480)
.......+.. ..++.... . ..+|. -| .++|++.++...++++++|+++..+|++|..+.
T Consensus 131 ~~i~~~G~~~-----------v~v~~~~~~~~~~~~~f~g~id----~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~ 195 (460)
T PRK13238 131 AHIELNGATA-----------VDLVIDEALDTGSRHPFKGNFD----LEKLEALIEEVGAENVPFIVMTITNNSAGGQPV 195 (460)
T ss_pred HHHHHcCCEE-----------EEEeccccccccccccccCCcC----HHHHHHHHhhcCCCceeEEEEecCCCCCCCcCC
Confidence 3322222111 11111100 0 01221 23 688998887543457899999887777664556
Q ss_pred CCChHHHHHHHHHHhCCEEEEcccccC----ccccC-CCccccccc------CCCcceeeec--cccccCcccc-ccccC
Q 011669 273 APGYLPAVYKSIKKAGGLCIADEVQAG----FARTG-SHFWGFEAH------GVVPDIVTMA--KGIGNGIPLG-AVVTT 338 (480)
Q Consensus 273 ~~~~l~~l~~l~~~~gillI~DEv~tg----fgr~G-~~~~~~~~~------~~~pDivt~s--K~~g~G~pig-~v~~~ 338 (480)
+.+.+++|+++|++||+++|+|+++.. |.... ......... +-..|+.+|| |... .+.| +++++
T Consensus 196 s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~--~~~GG~i~~~ 273 (460)
T PRK13238 196 SMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM--VNIGGLLCFR 273 (460)
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCC--CcceeEEEcC
Confidence 888899999999999999999997742 11000 000000100 1124555555 2111 1323 55556
Q ss_pred -HHHHHhhcCCC----ccccCCCcHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE
Q 011669 339 -PEIAEVLTRRN----YFNTFGGNPVCTAAGH-AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412 (480)
Q Consensus 339 -~~~~~~l~~~~----~~~t~~~~~~~~aaa~-a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~ 412 (480)
+++++.+.... .+.|+++++..+.+|+ .+|+...++++.+...+..++|.+.|++. .++.+ ....|.++.
T Consensus 274 d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~--~p~Gg~~v~ 349 (460)
T PRK13238 274 DEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA--GVPIQ--TPAGGHAVF 349 (460)
T ss_pred hHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC--CCCeE--ccCCceEEE
Confidence 57888776542 2458888766644444 35554334455555555567777777664 33333 234456666
Q ss_pred EEEecCCCcCCC-CHHHHHHHH-HHHHHcCceeeccCcC---------------CCEEEEeCCC-CCCHHHHHHHHHHHH
Q 011669 413 VEFVTDRQLKTP-AKAETLYIM-DKMKEMGVLVGKGGFY---------------GNVFRITPPL-CFTKEDADYLVDVMD 474 (480)
Q Consensus 413 i~~~~~~~~~~~-~~~~~~~~~-~~l~~~Gv~v~~~~~~---------------~~~iRi~p~~-~~t~~~id~~l~~l~ 474 (480)
+++..-.. ..+ .......++ +.+++.||.+.+++.+ .+.+||+.|- ..|.+++|.+.++|.
T Consensus 350 ~d~~~~~~-~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~ 428 (460)
T PRK13238 350 VDAGKFLP-HIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALK 428 (460)
T ss_pred EEchhcCC-CCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHH
Confidence 66532110 001 000123344 4556789999886521 2679999773 449999999999999
Q ss_pred HHHh
Q 011669 475 YSLS 478 (480)
Q Consensus 475 ~~l~ 478 (480)
++.+
T Consensus 429 ~~~~ 432 (460)
T PRK13238 429 AVKE 432 (460)
T ss_pred HHHH
Confidence 8764
No 239
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.86 E-value=2e-19 Score=181.85 Aligned_cols=321 Identities=16% Similarity=0.085 Sum_probs=199.6
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC--CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~--~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
..|.|.+++.+.. .|....|. ....+++++|+++++... +.+++++||+++++.++..... +++++++..++
T Consensus 16 ~~~~~~~a~~~~~---~~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~--~~~~vlv~~~~ 89 (368)
T PRK13479 16 TSRTVREAMLRDW---GSWDDDFN-ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP--RDGKVLVPDNG 89 (368)
T ss_pred CCHHHHHHhCCCC---CCCChHHH-HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCC
Confidence 4577777765543 22222232 577889999999987643 4688999999999999986643 56678887777
Q ss_pred cccccc-cccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeC
Q 011669 194 YHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL 272 (480)
Q Consensus 194 yhG~~~-~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~ 272 (480)
|++... ......+. .+..++.+. . +..| .+++++.++.. .+++.|.+..+++++|.+.+
T Consensus 90 ~~~~~~~~~~~~~g~----------~~~~i~~~~--~--~~~d----~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 90 AYGARIAQIAEYLGI----------AHVVLDTGE--D--EPPD----AAEVEAALAAD--PRITHVALVHCETTTGILNP 149 (368)
T ss_pred chHHHHHHHHHHcCC----------cEEEEECCC--C--CCCC----HHHHHHHHHhC--CCCcEEEEEcccCccccccC
Confidence 776532 11111110 122232221 1 1123 57788777632 24556666667777888877
Q ss_pred CCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCccccccccCHHHHHhhcCCCc
Q 011669 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNY 350 (480)
Q Consensus 273 ~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~ 350 (480)
+++|.++|+++|+++|+|++|. ||... ++.....+|++ +++|.+.++.++|++++++++++.+.....
T Consensus 150 ----~~~i~~l~~~~~~~livDa~~~-~g~~~-----~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~ 219 (368)
T PRK13479 150 ----LDEIAAVAKRHGKRLIVDAMSS-FGAIP-----IDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSR 219 (368)
T ss_pred ----HHHHHHHHHHcCCEEEEEcccc-cCCcc-----ccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCC
Confidence 8999999999999999998774 65321 22222345665 567998765567999999998877654321
Q ss_pred -----------------cccCCCcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCceeeE-eccc
Q 011669 351 -----------------FNTFGGNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRG 408 (480)
Q Consensus 351 -----------------~~t~~~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g 408 (480)
...|+.|....++..++++.+.++ +..+++.+..+++++.|+++ .+..+..- ...+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 297 (368)
T PRK13479 220 SLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL--GFEPLLDAEIQSP 297 (368)
T ss_pred CeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc--CCcccCCchhcCc
Confidence 111355666667777777766443 33455555666666666554 22111110 0111
Q ss_pred eeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 409 FLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY-GNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 409 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
....+.+.... ......+.+.|.++||.+.++... .+.+|++.....+++|++.++++|+++++++
T Consensus 298 ~~~~~~~~~~~------~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 298 IIVTFHAPADP------AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred eEEEEECCCCC------CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 22223221110 012457888999999999876432 3589998655679999999999999998753
No 240
>PLN02368 alanine transaminase
Probab=99.85 E-value=5.7e-20 Score=187.01 Aligned_cols=207 Identities=13% Similarity=0.054 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe
Q 011669 142 AIADFAEALASKMP--GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (480)
Q Consensus 142 ~~~~l~e~L~~~~~--~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~ 219 (480)
....+++.+.+..+ .+.++|++|+|+++++..+++.... .+++.|++.+++|..+........ .
T Consensus 112 LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~-~pGd~Vli~~P~Y~~y~~~~~~~g-------------~ 177 (407)
T PLN02368 112 VRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR-GEKDGVLVPVPQYPLYSATISLLG-------------G 177 (407)
T ss_pred HHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC-CCCCEEEEeCCCCccHHHHHHHcC-------------C
Confidence 33444444443323 3567899999999999999886531 257889999999987765544332 2
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccC-C-CceE-EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-S-GHVA-GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-~-~~~a-~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
..+++|......|+-| .+++++.++... . .+++ .++++| +|++|.+ .+++.+++|.++|++||+++|+||+
T Consensus 178 ~~v~v~~~~~~~~~~d----~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v-~s~e~l~~l~~~a~~~~~~II~DE~ 251 (407)
T PLN02368 178 TLVPYYLEESENWGLD----VNNLRQSVAQARSKGITVRAMVIINP-GNPTGQC-LSEANLREILKFCYQERLVLLGDEV 251 (407)
T ss_pred EEEEEecccccCCCCC----HHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 2333332222234444 567777775311 1 1456 455556 6777766 4899999999999999999999999
Q ss_pred ccCccccCC-Ccccc-cc---c-------CCCcceeeecccc-c-cCccccccc---cCHHHHHhhcCCCccccCCCcHH
Q 011669 297 QAGFARTGS-HFWGF-EA---H-------GVVPDIVTMAKGI-G-NGIPLGAVV---TTPEIAEVLTRRNYFNTFGGNPV 359 (480)
Q Consensus 297 ~tgfgr~G~-~~~~~-~~---~-------~~~pDivt~sK~~-g-~G~pig~v~---~~~~~~~~l~~~~~~~t~~~~~~ 359 (480)
|..|.+.+. .+.+. +. . +...-+-+|||++ + .|||+||++ +++++++.+.... ..+++.|.+
T Consensus 252 Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~~~~~~ 330 (407)
T PLN02368 252 YQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIALSPNVS 330 (407)
T ss_pred ccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccCCCCcH
Confidence 998865542 12121 10 0 1112233789999 5 799999999 4888888877643 346778889
Q ss_pred HHHHHHHHHH
Q 011669 360 CTAAGHAVLK 369 (480)
Q Consensus 360 ~~aaa~a~L~ 369 (480)
++.++.++|+
T Consensus 331 ~Q~aa~~~l~ 340 (407)
T PLN02368 331 GQIFMGLMVN 340 (407)
T ss_pred HHHHHHHHhC
Confidence 9999998885
No 241
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.85 E-value=8.5e-19 Score=177.51 Aligned_cols=320 Identities=20% Similarity=0.263 Sum_probs=215.0
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHhcccc---cccc----CChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS---TVLY----LNHAIADFAEALASKMPGNL-KVVFFTNSGTEANE 172 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~---~~~~----~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~ 172 (480)
|||-.+ .|..++.|.+++.+.+.+.... .... ..+...+.++.++++++.+. +.|+|+.|+|+|++
T Consensus 2 Yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~ 75 (371)
T PF00266_consen 2 YLDNAG------TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN 75 (371)
T ss_dssp EEBTSS------S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred EeeCCC------ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence 666433 2467899999999988764211 1111 13455788999999998777 78999999999999
Q ss_pred HHHHHHHh-hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 173 LAIMMARL-YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 173 ~Alk~ar~-~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
.++...+. ..++++|++....|++........... .|......+....+. .| .+++++.++
T Consensus 76 ~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~i~~~~~~~--~~----~~~~~~~l~--- 137 (371)
T PF00266_consen 76 AVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKR---------KGAEVRVIPADPGGS--LD----LEDLEEALN--- 137 (371)
T ss_dssp HHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHH---------TTEEEEEEEEGTTSS--CS----HHHHHHHHH---
T ss_pred hhhhcccccccccccccccccccccccccccccccc---------chhhhccccccccch--hh----hhhhhhhhc---
Confidence 99997743 457789999999998766333222110 122222222111111 12 677888885
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccC
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNG 329 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G 329 (480)
++++.|++..+.+.+|.+.| +++|.++|+++|+++++|-+|+ +|... ++.....+|++++| | ++|+
T Consensus 138 -~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~~-----id~~~~~~D~~~~s~~K-l~gp 205 (371)
T PF00266_consen 138 -PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCVP-----IDLDELGADFLVFSSHK-LGGP 205 (371)
T ss_dssp -TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTSS-------TTTTTESEEEEESTS-TTSS
T ss_pred -cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-ccccc-----ccccccccceeeecccc-cCCC
Confidence 48899999999999999888 9999999999999999999997 54332 33444567888776 9 8887
Q ss_pred ccccccccCHHHHHhhcCCCcccc------------------C---CCcHHHHHHHHHHHHHhhh---hHHHHHHHHHHH
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNT------------------F---GGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGS 385 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t------------------~---~~~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~ 385 (480)
..+|+++++++.++.+.+...+.. | ..|.....+..++|+.+.+ +++.++..++.+
T Consensus 206 ~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 206 PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAE 285 (371)
T ss_dssp STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHH
Confidence 778999999999888854321111 1 2344555666677777744 345566677777
Q ss_pred HHHHHHHHhHHhcCcee-----eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCC----------
Q 011669 386 YLKERLTALKDKYGIIG-----DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG---------- 450 (480)
Q Consensus 386 ~l~~~L~~l~~~~~~~~-----~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---------- 450 (480)
++++.|+++ +.+. .-...+.++.+.+... ....+.+.|.++||.+..|....
T Consensus 286 ~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~ 352 (371)
T PF00266_consen 286 YLREALEEL----PGIEVLGPDDEPRRPSIVSFNLPGS---------DADDVVKYLEERGIAVSTGSACAGPSLDILGMG 352 (371)
T ss_dssp HHHHHHHHT----TTEEESSSSCGGBGTTEEEEEETTS---------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTT
T ss_pred HHHhhhhcC----CceeEeeecccccccceEEEeecCC---------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCC
Confidence 777777665 3221 1233455666666221 14678888998899999854332
Q ss_pred CEEEEeCCCCCCHHHHHHH
Q 011669 451 NVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 451 ~~iRi~p~~~~t~~~id~~ 469 (480)
+.+|+++....|++|||++
T Consensus 353 ~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 353 GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEE-GTTSSHHHHHHH
T ss_pred CEEEEeccCCCCHHHHhhC
Confidence 7999999999999999975
No 242
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=2.7e-19 Score=180.62 Aligned_cols=319 Identities=17% Similarity=0.126 Sum_probs=195.9
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHhcc-cccc------ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTV------LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~------~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~ 173 (480)
|||..+. +..++.|.+++.+.+.... .... ....+...+++++|+++++.+.++|+|++|+|+|+..
T Consensus 2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~ 75 (364)
T PLN02651 2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNL 75 (364)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 6665433 3457899999988875431 1110 0113446788899999998777789999999999999
Q ss_pred HHHHHHhh--cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC
Q 011669 174 AIMMARLY--TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251 (480)
Q Consensus 174 Alk~ar~~--~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~ 251 (480)
+++.+... .++++||+.+..|++.......+.. .|+....+|.... +..| .++++++++
T Consensus 76 ~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~----------~g~~v~~v~~~~~--~~~d----~~~l~~~i~--- 136 (364)
T PLN02651 76 AIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQ----------EGFEVTYLPVKSD--GLVD----LDELAAAIR--- 136 (364)
T ss_pred HHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHh----------cCCEEEEEccCCC--CcCC----HHHHHHhcC---
Confidence 99876432 3456777766666543322211110 1322222221111 1112 577877775
Q ss_pred CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccC
Q 011669 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNG 329 (480)
Q Consensus 252 ~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G 329 (480)
+++++|++..+++++|.+.+ +++|.++|++||+++++|.+|+ +|.. . ++..+..+|++++| | +++.
T Consensus 137 -~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~---~--~~~~~~~~D~~~~s~hK-~~gp 204 (364)
T PLN02651 137 -PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI---P--VDVDDLGVDLMSISGHK-IYGP 204 (364)
T ss_pred -CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc---c--cCcccCCCCEEEechhh-hCCC
Confidence 36788999999999999987 9999999999999999999997 4322 1 23334456888776 8 5554
Q ss_pred ccccccccCHHHHHhhcCCCcc-------ccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCc
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYF-------NTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGI 400 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~-------~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~ 400 (480)
..+|+++++++..+.+.+...+ .....|..+..+..++|+.+.+ ++..++.+++.++++++|++......+
T Consensus 205 ~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i 284 (364)
T PLN02651 205 KGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRV 284 (364)
T ss_pred CceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 6689999998766555432211 1223455666777788887754 344566666666666666542111112
Q ss_pred eee--E-eccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---------------------CCCEEEEe
Q 011669 401 IGD--V-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---------------------YGNVFRIT 456 (480)
Q Consensus 401 ~~~--v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------~~~~iRi~ 456 (480)
+.. . .....++.+.+.. .....+.+.|.+ |.++.|.. ..+.+|++
T Consensus 285 ~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S 353 (364)
T PLN02651 285 NGPRDPEKRYPGTLNLSFAY---------VEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLG 353 (364)
T ss_pred ECCCCcccCcCCEEEEEeCC---------CCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEE
Confidence 221 0 1112244444421 113456666654 66654420 12689999
Q ss_pred CCCCCCHHHHH
Q 011669 457 PPLCFTKEDAD 467 (480)
Q Consensus 457 p~~~~t~~~id 467 (480)
++..+|++|||
T Consensus 354 ~~~~~t~~did 364 (364)
T PLN02651 354 VGRFTTEEEVD 364 (364)
T ss_pred cCCCCCHHHcC
Confidence 99999999985
No 243
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.84 E-value=3.7e-18 Score=173.16 Aligned_cols=319 Identities=16% Similarity=0.131 Sum_probs=197.6
Q ss_pred CCHHHHHHHHHHHHhcc-cc-ccccC-----ChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceE
Q 011669 116 CHPYVVDSIVNQIKRIQ-HS-TVLYL-----NHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDI 187 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~-~~-~~~~~-----~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~i 187 (480)
.++.|.+++.+.+.+.. .. ...|. .....++++.|+++++... ++|+|++|++++++.++... ..+++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~--~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL--LKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc--cCCCCEE
Confidence 46799999988887642 11 11122 2556789999999987533 48999999999999988753 2356788
Q ss_pred EEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCC
Q 011669 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVG 267 (480)
Q Consensus 188 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~ 267 (480)
++....|++.......... ..|+....++... .+..| .+++++.++ .++++|++..+++++
T Consensus 90 l~~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~~--~~~~d----~~~l~~~~~----~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKE---------QIGVEITIVKCDN--EGLIS----PERIKRAIK----TNTKLIVVSHASNVT 150 (376)
T ss_pred EECcchhhHHHHHHHHHHH---------HcCcEEEEEecCC--CCCcC----HHHHHHhcC----CCCeEEEEECCCCCc
Confidence 8877665443221111100 0122222222111 11123 567777774 267788888888889
Q ss_pred cceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHH-HHh
Q 011669 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEI-AEV 344 (480)
Q Consensus 268 G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~-~~~ 344 (480)
|.+.+ +++|.++|+++|+++|+|++|+ +|... +..+ ...+|++++| |.+++.-..|+++.+++. +..
T Consensus 151 G~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~---~~~~--~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~ 220 (376)
T TIGR01977 151 GTILP----IEEIGELAQENGIFFILDAAQT-AGVIP---IDMT--ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP 220 (376)
T ss_pred cccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC---CCch--hcCCCEEEecccccccCCCCceEEEEcCCcCcCc
Confidence 98877 8999999999999999999996 54332 1122 2346777554 998764456766666543 111
Q ss_pred hcCCC--c--------------cccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCcee--e
Q 011669 345 LTRRN--Y--------------FNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIG--D 403 (480)
Q Consensus 345 l~~~~--~--------------~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~ 403 (480)
+.... . +.....+....++..++|+.+.+. ...++.+++.++++++|.++. ...... +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~~ 299 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREIN-KVKIYGPAD 299 (376)
T ss_pred eecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CeEEeCCCC
Confidence 11100 0 011123455566666788877653 456777777777777776542 111111 0
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCc------------CCCEEEEeCCCCCCHHHHHHHH
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGF------------YGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~------------~~~~iRi~p~~~~t~~~id~~l 470 (480)
....+.++++.+... ....+.+.|.++ ||.+..+.. ..+.+|+++...+|++|++.++
T Consensus 300 ~~~~~~~v~~~~~~~---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~ 370 (376)
T TIGR01977 300 PANRVGVVSFTVEGI---------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLL 370 (376)
T ss_pred ccccCCeEEEEECCC---------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHH
Confidence 111344556655211 145688888887 999876531 2368999999999999999999
Q ss_pred HHHHH
Q 011669 471 DVMDY 475 (480)
Q Consensus 471 ~~l~~ 475 (480)
++|++
T Consensus 371 ~~l~~ 375 (376)
T TIGR01977 371 EALSE 375 (376)
T ss_pred HHHhh
Confidence 99975
No 244
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.83 E-value=2.9e-18 Score=164.40 Aligned_cols=337 Identities=18% Similarity=0.182 Sum_probs=214.0
Q ss_pred eCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Q 011669 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (480)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~A 174 (480)
..||...+|-.+-+..- |+.|...+|+++-+.+... ....-+++++++++++|.||+..
T Consensus 104 ~~eg~~~f~~la~fqdy---~Gl~~frqa~A~Fm~~~r~------------------~~v~fdP~~~Vv~~G~T~ane~l 162 (471)
T KOG0256|consen 104 TREGQSSFDELAMFQDY---HGLPSFRQAVAEFMERARG------------------NRVKFDPERVVVTNGATSANETL 162 (471)
T ss_pred ccccccchhhHhhcccc---cCchHHHHHHHHHHHHHhC------------------CCCccCccceEEecccchhhHHH
Confidence 34666666666655555 8888888888887766311 01122567899999999999987
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCc
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~ 254 (480)
+..... +++..++..|-|.|+.....-- .|+..+|+...-...|..+.+.+-++++++.+. ..+
T Consensus 163 ~fcLad--pgdafLvPtPyY~gfdrdl~~r------------Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~--~~k 226 (471)
T KOG0256|consen 163 MFCLAD--PGDAFLVPTPYYPGFDRDLRWR------------TGVEIVPVHCSSSNGFQITVEALEAALNQARKL--GLK 226 (471)
T ss_pred HHHhcC--CCceeeecCCCCCcccccceec------------cCceEEEEEeecCCCccccHHHHHHHHHHHHHh--CCc
Confidence 664433 7888999999998874332211 256666654433334444544333444444432 347
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc----ccCCCccee----eecccc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE----AHGVVPDIV----TMAKGI 326 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~----~~~~~pDiv----t~sK~~ 326 (480)
++++|+...+|+-|.+ .+++.|..+.+.|.++++.+|+||||+|-....+.+.++- .....+|.+ ++||-+
T Consensus 227 VkGvlitNPsNPLG~~-~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~ 305 (471)
T KOG0256|consen 227 VKGVLITNPSNPLGTT-LSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF 305 (471)
T ss_pred eeEEEEeCCCCCCCCc-cCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecccc
Confidence 8888877777777766 4888899999999999999999999998544443333321 112245533 789999
Q ss_pred c-cCccccccccCH-HHHHhhcCCCccccCCCcHHHHHHHHHHHHH--hhhh---HHHHHHHHHHHHHHHHHHHhHHhcC
Q 011669 327 G-NGIPLGAVVTTP-EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV--IQKD---KLQNNAHVVGSYLKERLTALKDKYG 399 (480)
Q Consensus 327 g-~G~pig~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~--i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (480)
| .|+|+|.+.... .+.....+...++ ..++..+......|.. +.++ +-..+++...+++.++|+++ +
T Consensus 306 GlpGfRvGviYS~ne~VvsaA~kmssf~--~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----g 379 (471)
T KOG0256|consen 306 GLPGFRVGVIYSNNEDVVSAATKMSSFG--LVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----G 379 (471)
T ss_pred CCCceEEEEEEecChHHHHHHHHHhhcc--CCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----C
Confidence 9 799999999764 4555544433222 2345556555554532 1111 11233333444444555444 5
Q ss_pred ceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCcC----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 400 IIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 400 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+..--++.|+|+|+++..--.+.. ......+++.+.++ ++.+.||..+ .+|+|+++. +..++.++-++++|.
T Consensus 380 I~cl~s~AGlF~wvDlr~lL~s~t--fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~ 456 (471)
T KOG0256|consen 380 IPCLKSNAGLFCWVDLRKLLTSLT--FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLK 456 (471)
T ss_pred CceeecCCeeEEEEEhHHhcCcCC--hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHH
Confidence 555667889999999864322221 12234466666666 9999998654 479999964 556666666999998
Q ss_pred HHHh
Q 011669 475 YSLS 478 (480)
Q Consensus 475 ~~l~ 478 (480)
..+.
T Consensus 457 ~~~~ 460 (471)
T KOG0256|consen 457 QFLD 460 (471)
T ss_pred HHHH
Confidence 8764
No 245
>PRK14012 cysteine desulfurase; Provisional
Probab=99.82 E-value=6.3e-18 Score=173.09 Aligned_cols=327 Identities=14% Similarity=0.137 Sum_probs=193.7
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHH--h-cccccc-----cc-CChHHHHHHHHHHHhCCCCCCEEEEeCCHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIK--R-IQHSTV-----LY-LNHAIADFAEALASKMPGNLKVVFFTNSGTE 169 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~--~-~~~~~~-----~~-~~~~~~~l~e~L~~~~~~~~~~v~f~~sGse 169 (480)
+.|+|..+. +..++.|.+++.+.+. . ...... .+ ..+...+++++++++++.+.+.++|++|||+
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 468886553 3467899999988775 2 111110 00 1245678889999999877778999999999
Q ss_pred HHHHHHHHHHh--hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMARL--YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar~--~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
|++.+++.+.. ..+++.||+....|+........+.. .|+....++.... +..| .+++++++
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~----------~g~~~~~v~~~~~--g~~d----~~~l~~~i 141 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLER----------EGFEVTYLDPQSN--GIID----LEKLEAAM 141 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHh----------CCCEEEEEccCCC--CcCC----HHHHHHhc
Confidence 99999986542 23567787777776543322211110 1222222221111 1112 57788877
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~ 325 (480)
+ .++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ +|... ++.....+|++++| |.
T Consensus 142 ~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~-----~~~~~~~~D~~~~s~~K~ 207 (404)
T PRK14012 142 R----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP-----IDLSKLKVDLMSFSAHKI 207 (404)
T ss_pred C----CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc-----cCcccCCCCEEEEehhhc
Confidence 5 35778989999999998887 8999999999999999999997 44221 22223458888777 97
Q ss_pred cccCccccccccCHHHHHhhcCCCccc------cCC-CcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHH
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRRNYFN------TFG-GNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKD 396 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~~~~~------t~~-~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~ 396 (480)
+|.+ ++|+++++++....+.+...+. ..+ .+.....+..++++.++. ++..++.+++.+++.+.|+++
T Consensus 208 ~gp~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~-- 284 (404)
T PRK14012 208 YGPK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI-- 284 (404)
T ss_pred cCCC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC--
Confidence 6543 6788888876433332211111 111 222233333355554432 234455566666666666543
Q ss_pred hcCceeeE-----eccce-eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC---------------------cC
Q 011669 397 KYGIIGDV-----RGRGF-LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG---------------------FY 449 (480)
Q Consensus 397 ~~~~~~~v-----~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------~~ 449 (480)
+.+... +..+. .+++.+.. ...+...|. ++.+.++. ..
T Consensus 285 --~~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (404)
T PRK14012 285 --EEVYLNGDLEQRVPGNLNVSFNYVE-----------GESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELA 349 (404)
T ss_pred --CCEEEeCCccccCCCEEEEEEeCcC-----------HHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhc
Confidence 322111 11111 22222211 123444443 44443321 01
Q ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 450 GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 450 ~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.+|+++....|++|+|.+++.|+++++.
T Consensus 350 ~~~iRls~~~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 350 HSSIRFSLGRFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999988753
No 246
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=6.6e-18 Score=172.92 Aligned_cols=335 Identities=16% Similarity=0.125 Sum_probs=190.6
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHH-hcc--cccc-cc-CChHH---HH-HHHHHHHhCCCCCCEEEEeCCHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIK-RIQ--HSTV-LY-LNHAI---AD-FAEALASKMPGNLKVVFFTNSGTE 169 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~-~~~--~~~~-~~-~~~~~---~~-l~e~L~~~~~~~~~~v~f~~sGse 169 (480)
+++|.+..+... -+|+|.+|+.+.+. +.. +... .| ..+.. .+ .++.+++.++.+...| +.+||++
T Consensus 19 ~~~~~~~~~~~~-----~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~ 92 (402)
T cd00378 19 RETLELIASENF-----TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANV-QPHSGSQ 92 (402)
T ss_pred HhCeeeeccCCc-----CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceee-ecCCcHH
Confidence 557777666543 37999999987652 321 1111 11 12222 33 3345667776554444 4457999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe--eEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV--HHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~--~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
|+..++..... ++++|++.++.|.+......... ....|. ..++++... ..+..| .+++++.+
T Consensus 93 a~~~~l~~l~~--~Gd~Vl~~~~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~-~~~~id----~~~l~~~i 157 (402)
T cd00378 93 ANLAVYFALLE--PGDTIMGLDLSHGGHLTHGSFTK--------VSASGKLFESVPYGVDP-ETGLID----YDALEKMA 157 (402)
T ss_pred HHHHHHHHhcC--CCCEEEEecCccCcccccccccc--------ccccceeEEEecCCcCc-ccCCcC----HHHHHHHH
Confidence 99999987643 67889999988855432211000 000122 122221100 012223 67788877
Q ss_pred HccCCCceEEEEE-cccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc-cCccccCCCcccccccCCCccee--eec
Q 011669 248 DFGTSGHVAGFLS-ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ-AGFARTGSHFWGFEAHGVVPDIV--TMA 323 (480)
Q Consensus 248 ~~~~~~~~a~vi~-epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-tgfgr~G~~~~~~~~~~~~pDiv--t~s 323 (480)
.. .+++++++ +|.+ |...+ +++|.++|++||+++|+||+| .|+...|.....+. ..|++ +++
T Consensus 158 ~~---~~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~----~~dv~~~s~s 223 (402)
T cd00378 158 LE---FKPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP----GADVVTTTTH 223 (402)
T ss_pred Hh---CCCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc----CCcEEEeccc
Confidence 53 24455555 4433 33333 999999999999999999996 44432331111111 24654 678
Q ss_pred cccccCccccccccCH-HHHHhhcCCCccccCCCc-HHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhc
Q 011669 324 KGIGNGIPLGAVVTTP-EIAEVLTRRNYFNTFGGN-PVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKY 398 (480)
Q Consensus 324 K~~g~G~pig~v~~~~-~~~~~l~~~~~~~t~~~~-~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~ 398 (480)
|++ +|+|.|++++++ ++++.+........++.+ +...+++..++..+.. +++.+++.++.+++++.|.++ .+
T Consensus 224 K~l-~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 300 (402)
T cd00378 224 KTL-RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER--GF 300 (402)
T ss_pred cCC-CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC--CC
Confidence 999 678999999987 888777543322233332 2233332333433322 345566666666776666654 22
Q ss_pred CceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeecc----Cc----CCCEEEEeCCCC----CCHHHH
Q 011669 399 GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKG----GF----YGNVFRITPPLC----FTKEDA 466 (480)
Q Consensus 399 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~----~~~~iRi~p~~~----~t~~~i 466 (480)
.... ....+.++|+.+..... ....+.+.|.++||.+.+. .. ..+.+||++... ++++|+
T Consensus 301 ~~~~-~~~~~~~v~v~~~~~~~-------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di 372 (402)
T cd00378 301 KVVS-GGTDNHLVLVDLRPKGI-------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEM 372 (402)
T ss_pred eEee-cCCCCeEEEEeCCccCC-------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHH
Confidence 2111 11346777787642110 1245666788899999642 11 235799987653 479999
Q ss_pred HHHHHHHHHHHhh
Q 011669 467 DYLVDVMDYSLSK 479 (480)
Q Consensus 467 d~~l~~l~~~l~~ 479 (480)
+++++.|.+++++
T Consensus 373 ~~~~~~l~~~~~~ 385 (402)
T cd00378 373 EEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987753
No 247
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.81 E-value=1.1e-17 Score=167.64 Aligned_cols=283 Identities=18% Similarity=0.083 Sum_probs=166.2
Q ss_pred ChHHHHHHHHHHHhCCCC--CCEEEEeCCHHHHHHHHHHHHHhh-----------cCCceEEEEcCCccccccccccccc
Q 011669 140 NHAIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLY-----------TGCNDIISLRNAYHGNAAGTMGATA 206 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~--~~~v~f~~sGseA~~~Alk~ar~~-----------~~~~~ii~~~~~yhG~~~~~~~~~~ 206 (480)
.....+++++++++++.+ .+.++||+|||+||..+++.++.. .+.+.+|+.....|..........+
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 344566777777777643 346899999999999999988652 1223455555555554333222211
Q ss_pred CCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHH
Q 011669 207 QSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284 (480)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~ 284 (480)
. .+..++... .+ ..| .++|++.++.. ...+++++++...++++|.+.+ +++|.++|
T Consensus 117 ~----------~~~~v~~~~--~~--~~d----~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~ 174 (345)
T cd06450 117 V----------KVRLVPVDE--DG--RMD----PEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLA 174 (345)
T ss_pred c----------CeEEeeeCC--CC--CcC----HHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHH
Confidence 1 112222111 11 123 56777777531 1124566666666667887755 99999999
Q ss_pred HHhCCEEEEcccccCccccCCCcccccccCC-Cccee--eeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHH
Q 011669 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCT 361 (480)
Q Consensus 285 ~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pDiv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~ 361 (480)
++||+++|+|++|.++.......... ..+. ..|.+ +++|.++++.++|+++.+ .
T Consensus 175 ~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------~ 231 (345)
T cd06450 175 EKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------A 231 (345)
T ss_pred HHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhhCCCcchHHHHHH----------------------H
Confidence 99999999999997653211000000 0111 34644 567988888888988766 2
Q ss_pred HHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeE-eccceeEEEEEecCCCcCCCCHHHHHHHHHHHH
Q 011669 362 AAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (480)
Q Consensus 362 aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 437 (480)
.+..++++.+..+ +..++..++.+++++.|.++ +.+..+ ...+.++.+.+.... . .......+.+.|.
T Consensus 232 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~---~-~~~~~~~i~~~L~ 303 (345)
T cd06450 232 LKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSV---K-LDELNYDLSDRLN 303 (345)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcc---h-hhHHHHHHHHHHH
Confidence 2333444444333 44555556666666665553 322111 123445555542210 0 0123467888999
Q ss_pred HcCceeeccCc--CCCEEEEeCCCCC-CHHHHHHHHHHHHH
Q 011669 438 EMGVLVGKGGF--YGNVFRITPPLCF-TKEDADYLVDVMDY 475 (480)
Q Consensus 438 ~~Gv~v~~~~~--~~~~iRi~p~~~~-t~~~id~~l~~l~~ 475 (480)
++|+++.++.. ...++|+++...+ |++|+|++++.|++
T Consensus 304 ~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 304 ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99766544322 2468999988764 99999999999976
No 248
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.79 E-value=1.9e-16 Score=159.43 Aligned_cols=321 Identities=12% Similarity=0.072 Sum_probs=188.5
Q ss_pred CEEEeccCCcccccCCCC--CHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHC--HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
+.+|...+-+ .++|-+ +++|.+++.+.++.+. ...+...+++++++++++. +.+++++|+|+|+.++++
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~ 78 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQNYF-----EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVA 78 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHH
Confidence 3455543333 456655 8999999999876531 2346778899999999854 578999999999999999
Q ss_pred HHHhhcCCc---------------eEEEEcCCccccc---ccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHH
Q 011669 177 MARLYTGCN---------------DIISLRNAYHGNA---AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM 238 (480)
Q Consensus 177 ~ar~~~~~~---------------~ii~~~~~yhG~~---~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~ 238 (480)
.+.. +++ +||+..+.|..+. ...+.. .|...+.++. .+..|
T Consensus 79 al~~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~------------~g~~~v~v~~----~~~~d--- 137 (363)
T TIGR01437 79 AVIT--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRL------------GGGKVVEAGY----ANECS--- 137 (363)
T ss_pred HHhc--CCCcchhhcccccccccceEEEECccchhcCCchHHHHHh------------cCCeEEEEcC----CCCCC---
Confidence 7643 343 6776665554331 011111 1332222221 11123
Q ss_pred HHHHHHHHHHccCCCceEEEE-EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCc
Q 011669 239 YAKDVQDLIDFGTSGHVAGFL-SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP 317 (480)
Q Consensus 239 ~~~~le~~i~~~~~~~~a~vi-~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~p 317 (480)
.++++++++. ++++++ ++..++.+|.+.+ +++|.++|++||+++|+|++|. . . ......+| .
T Consensus 138 -~~~le~ai~~----~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~---~~~~~~~g--~ 200 (363)
T TIGR01437 138 -AEQLEAAITE----KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--D---LQKYYRLG--A 200 (363)
T ss_pred -HHHHHHhcCh----hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--c---hHHHHHcC--C
Confidence 6788888852 455554 5554556676666 8999999999999999999996 1 1 11111223 4
Q ss_pred ceeeec--cccccCccccccccCHHHHHhhcCCCcc--ccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHH
Q 011669 318 DIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYF--NTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 318 Divt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~~--~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L 391 (480)
|++++| |.++ |++.|++++++++++.+....++ ..+......+++..++++.+.+ .+..+...+..++++++|
T Consensus 201 D~~~~S~~K~l~-gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L 279 (363)
T TIGR01437 201 DLVIYSGAKAIE-GPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEAL 279 (363)
T ss_pred CEEEEeCCcccC-CCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHH
Confidence 777654 8885 55789999998887765432211 1111112233444455555433 122333333444566666
Q ss_pred HHhHHhcCceeeE---eccce---eEEEEEecCCCcCCCCHHHHHHHHHHHHHcC--ceeeccCcCCCEEEEeCCCCCCH
Q 011669 392 TALKDKYGIIGDV---RGRGF---LLGVEFVTDRQLKTPAKAETLYIMDKMKEMG--VLVGKGGFYGNVFRITPPLCFTK 463 (480)
Q Consensus 392 ~~l~~~~~~~~~v---~g~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~~~~~~~iRi~p~~~~t~ 463 (480)
.++ +.+... ...+. ...+.+..... ......+.+.|.++| |..++-....+.+|+.|. +.++
T Consensus 280 ~~i----~g~~~~~~~~~~~~~~~~~~v~~~~~~~-----g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~-~~~~ 349 (363)
T TIGR01437 280 NTL----KGVSASIVQDEAGRDIARAEIRFDESEL-----GMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR-SVTG 349 (363)
T ss_pred hcC----CCeEEEEecCCCCCcCceEEEEEeccCC-----CCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee-cCCH
Confidence 654 222111 11111 12233322110 112467888898877 665542223467999988 5679
Q ss_pred HHHHHHHHHHHHHH
Q 011669 464 EDADYLVDVMDYSL 477 (480)
Q Consensus 464 ~~id~~l~~l~~~l 477 (480)
+|++.++++|++++
T Consensus 350 ~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 350 GQLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 249
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=9.5e-17 Score=155.37 Aligned_cols=296 Identities=15% Similarity=0.096 Sum_probs=199.2
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHH
Q 011669 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (480)
.++.|+|.+.+.+..++++.. .++.|++-..+|-+.... +...|+..+|++.. +....
T Consensus 126 diiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s-------------~~a~gv~~ipv~md-------~~Gi~ 183 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQS-------------MEALGVKIIPVKMD-------QDGID 183 (472)
T ss_pred eEEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHh-------------ccccCceEEecccc-------CCCCC
Confidence 689999999999999998876 566777777777432211 11135666665542 11122
Q ss_pred HHHHHHHHHccCC-----CceEEEEEcc-cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc---CC-----
Q 011669 240 AKDVQDLIDFGTS-----GHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART---GS----- 305 (480)
Q Consensus 240 ~~~le~~i~~~~~-----~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~---G~----- 305 (480)
.+.|++.+..... .+......-| .||++|... +.+--++|.+||+|||+++|.||+|--+-.. ++
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~ 262 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELES 262 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccC
Confidence 6788888875422 2356666666 888999875 7788899999999999999999999633222 10
Q ss_pred C--------------cccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh
Q 011669 306 H--------------FWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (480)
Q Consensus 306 ~--------------~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i 371 (480)
+ +...+..|.+...-+|||-++.|+|+||+.+++.+++.+.......|-+.+.+.+....+.|+..
T Consensus 263 p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~w 342 (472)
T KOG0634|consen 263 PAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRW 342 (472)
T ss_pred ccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHH
Confidence 0 11112223333445899999999999999999988888776666678888889999999999887
Q ss_pred hhhHHHHHHHHHHH---HHHHHHHHhHHhc-Cc---eeeEeccceeEEEEEecCCCcCCCC-HHHHHHHHHHHHHcCcee
Q 011669 372 QKDKLQNNAHVVGS---YLKERLTALKDKY-GI---IGDVRGRGFLLGVEFVTDRQLKTPA-KAETLYIMDKMKEMGVLV 443 (480)
Q Consensus 372 ~~~~~~~~~~~~~~---~l~~~L~~l~~~~-~~---~~~v~g~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~l~~~Gv~v 443 (480)
.++++++.+.++.. ..+..+-..++++ |. ...++-.|+|+|+++.-......+. ....+.+...+.++||.+
T Consensus 343 gqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~ 422 (472)
T KOG0634|consen 343 GQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKL 422 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEE
Confidence 77765555555443 3333333333333 42 2345667999999985111100011 112345666778999999
Q ss_pred eccCcC--------CC-EEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 444 GKGGFY--------GN-VFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 444 ~~~~~~--------~~-~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..|..| .+ ++|++.++. ..+++++++++|..++++
T Consensus 423 v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 423 VCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHH
Confidence 887422 23 899998754 678999999999998875
No 250
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=4.2e-17 Score=166.01 Aligned_cols=350 Identities=15% Similarity=0.121 Sum_probs=196.2
Q ss_pred eCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Q 011669 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (480)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~A 174 (480)
-..|..||||.+-.++ ..+.+++.+++..... ....+....+|++.++++++ .+.+++++||++|+..+
T Consensus 16 l~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~--~Y~~~~g~~~Leeaia~~~g--~~~vv~t~~Gt~Al~la 84 (431)
T cd00617 16 LRSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDE--AYAGSKSFYDLEDAVQDLFG--FKHIIPTHQGRGAENIL 84 (431)
T ss_pred CCCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCC--ccCCCCCHHHHHHHHHHHHC--CCeEEEcCCHHHHHHHH
Confidence 3457788999865544 3455555555554321 12236678899999999995 46899999999999999
Q ss_pred HHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCC----cCCCCC--CChHHHHHHHHHHHH
Q 011669 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP----YRGVFG--ADGEMYAKDVQDLID 248 (480)
Q Consensus 175 lk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~----~~~~~~--~d~~~~~~~le~~i~ 248 (480)
++.... +++.| ..++.|...........+.+. .++.... ...+|. -| +++|+++|+
T Consensus 85 ~~al~~--pGD~V-~~~~~f~~~~~~i~~~Ga~pv-----------~v~i~~~~~~~~~~pf~gniD----~e~Le~~I~ 146 (431)
T cd00617 85 FSILLK--PGRTV-PSNMHFDTTRGHIEANGAVPV-----------DLVIDEAHDAQELIPFKGNID----VAKLEKLID 146 (431)
T ss_pred HHHhCC--CCCEE-ccCCcccchHHHHHhCCCEeE-----------EEecccccccccccCCCCCcC----HHHHHHHhC
Confidence 876533 45544 566666544332222222111 1111000 001221 23 688998887
Q ss_pred ccCCCceEEEEEcccCCC-CcceeCCCChHHHHHHHHHHhCCEEEEcccccCc---c---ccCCCcccccccCCCcceee
Q 011669 249 FGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF---A---RTGSHFWGFEAHGVVPDIVT 321 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~-~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgf---g---r~G~~~~~~~~~~~~pDivt 321 (480)
....+++++|+++..+|. +|. +.+.+.+++|+++|++||++||.|+++.-. + |.+ .........+...+.+
T Consensus 147 ~~~~~~~~~I~v~~p~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~-g~~~~si~ei~~e~~s 224 (431)
T cd00617 147 EVGAENIPYIVLTITNNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREE-GYRDKSIAEIAREMFS 224 (431)
T ss_pred cccCCCccEEEEECCcCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccc-cccCCCHHHHHHHhhc
Confidence 433345788888765555 465 458888999999999999999999996421 0 000 0000000011112234
Q ss_pred eccccc-cCc-----ccc-ccccCH-HHHHhhcCCC----ccccCCCcHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHH
Q 011669 322 MAKGIG-NGI-----PLG-AVVTTP-EIAEVLTRRN----YFNTFGGNPVCTAAGHA-VLKVIQKDKLQNNAHVVGSYLK 388 (480)
Q Consensus 322 ~sK~~g-~G~-----pig-~v~~~~-~~~~~l~~~~----~~~t~~~~~~~~aaa~a-~L~~i~~~~~~~~~~~~~~~l~ 388 (480)
+||++. .|+ ++| ++++++ ++++.+.... ...++++...-..++++ +|+...+.+..++..+..+++.
T Consensus 225 ~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~ 304 (431)
T cd00617 225 YADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLG 304 (431)
T ss_pred cCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 455544 233 344 788886 5888776421 22344443222333333 5553222233333333446666
Q ss_pred HHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHH-HHHHHcCceeeccCc---------------CCCE
Q 011669 389 ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIM-DKMKEMGVLVGKGGF---------------YGNV 452 (480)
Q Consensus 389 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~v~~~~~---------------~~~~ 452 (480)
+.|++. ++....+..|.+++++...-.....+.......++ +.+.+.||.+..-|. .-+.
T Consensus 305 ~~L~~~----G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (431)
T cd00617 305 DRLDEA----GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELEL 380 (431)
T ss_pred HHHHHC----CCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccce
Confidence 666665 33322334456677775431100000111234455 455677888643211 1257
Q ss_pred EEEeCCC-CCCHHHHHHHHHHHHHHHhh
Q 011669 453 FRITPPL-CFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 453 iRi~p~~-~~t~~~id~~l~~l~~~l~~ 479 (480)
+|+..|- ..|.+++|.+.++|..++++
T Consensus 381 ~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 381 VRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred eEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 9998885 77999999999999988764
No 251
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.4e-17 Score=156.64 Aligned_cols=333 Identities=19% Similarity=0.185 Sum_probs=199.8
Q ss_pred EeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh
Q 011669 102 LDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY 181 (480)
Q Consensus 102 lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~ 181 (480)
+||-|...+. .+|+++|||.+.-. ......+.++...++.+++++.+.. ..++|+.|||.||..+|.....
T Consensus 2 ~~f~SDn~~g----~~~~m~eam~~a~~--~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~- 72 (342)
T COG2008 2 IDFRSDNVAG----PTPEMREALAAANA--VGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQ- 72 (342)
T ss_pred CccccCccCC----CCHHHHHHHHhccc--cCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcC-
Confidence 5777766653 68999999987543 1222344578888999999999964 7899999999999999986553
Q ss_pred cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEE
Q 011669 182 TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFL 259 (480)
Q Consensus 182 ~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi 259 (480)
+.+.||+ ...-|-++..+-+..- + .++...+.... .++...+++++..+... ....+..++
T Consensus 73 -~~~~vi~-~~~aHi~~~E~Ga~~~---~------~~~~~~~~~~g------~~Gklt~e~v~~~i~~~d~~~~~~~~~~ 135 (342)
T COG2008 73 -PGESVIC-HETAHIYTDECGAPEF---F------GGGQKLPIVPG------ADGKLTPEDVEAAIRPDDIHHAPTPLAV 135 (342)
T ss_pred -CCCeEEE-eccccceecccCcHHH---H------cCCceeccCCC------CCCCcCHHHHHHhhcCCCcccCCCceEE
Confidence 4444444 3444443332211100 0 11222222111 12222267888877631 223556666
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccccccCCCcceeeeccccccCccccccc-
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV- 336 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~- 336 (480)
.|..++++|.+ +|.++|++|.++|++||+.|+.|-+--. .-..| -....+....|+++|+-+-++|+|.|+|+
T Consensus 136 ~e~~~te~GtV-y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~ 211 (342)
T COG2008 136 LENTATEGGTV-YPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYVDSVSFCLTKGGGAPVGAIVF 211 (342)
T ss_pred EeeccCCCcee-cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhCCEEEEecccCCcceeeeEEE
Confidence 67666688876 6999999999999999999999964210 00011 01122334578887765555677888766
Q ss_pred cCHHHHHhhcC--CCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE
Q 011669 337 TTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414 (480)
Q Consensus 337 ~~~~~~~~l~~--~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~ 414 (480)
+++++++.+.. ...++-+.-..+-.++++..|+.----...+|..++.++|.+.+.+. .+.-...+...+++.+.
T Consensus 212 gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~~ 288 (342)
T COG2008 212 GNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFVR 288 (342)
T ss_pred cCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEEE
Confidence 67788776643 22344444445555556665542111122344444566666665542 12222233566677666
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+... ..........+...|+++.+.+ ..+||..+..+|+++++++++.+++++
T Consensus 289 l~~~-------~i~~l~~~~~~~~~~~~~~~~~---~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 289 LPES-------AIEALRLAGALFYRGVLIGAHG---EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CChH-------HHHHHHhhchhheeeeeccCCC---ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 6321 0122333444556666665432 479999999999999999999998765
No 252
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=2.8e-16 Score=161.64 Aligned_cols=335 Identities=13% Similarity=0.081 Sum_probs=188.9
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHH-hcc--ccccccC--ChHHHHH----HHHHHHhCCCCCCEEEEeCCHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIK-RIQ--HSTVLYL--NHAIADF----AEALASKMPGNLKVVFFTNSGTE 169 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~-~~~--~~~~~~~--~~~~~~l----~e~L~~~~~~~~~~v~f~~sGse 169 (480)
+.+|++.++... -+|+|.+|+.+.+. +.. +....+. .+...++ ++.+++.++.+...|+ ++||++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~-~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQ-PHSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeee-cCCchH
Confidence 455777665432 47999999877653 211 1111111 1223333 3477888876555454 467899
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
|+..+++... .+++.|++..+.|.+.......... ...|...+.++... ..+..| .++++++++.
T Consensus 99 al~~~l~~l~--~~gd~Vl~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~-~~~~~d----~~~l~~~i~~ 163 (416)
T PRK00011 99 ANAAVYFALL--KPGDTILGMDLAHGGHLTHGSPVNF--------SGKLYNVVSYGVDE-ETGLID----YDEVEKLALE 163 (416)
T ss_pred HHHHHHHHhc--CCCCEEEEeccccCCcccccccccc--------ccceeeEeecCcCc-ccCCcC----HHHHHHHHHh
Confidence 9999887663 3678899988887553221111000 00122222222110 012223 6778888863
Q ss_pred cCCCceEEEEEc-ccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eecccc
Q 011669 250 GTSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGI 326 (480)
Q Consensus 250 ~~~~~~a~vi~e-pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~ 326 (480)
.++++|++. ++ .|...+ +++|.++|++||+++|+||+|. +|..+...... ..+ ..|++ +++|++
T Consensus 164 ---~~~k~v~~~~~~---~~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~-~~~-~~di~~~S~~K~l 230 (416)
T PRK00011 164 ---HKPKLIIAGASA---YSRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPS-PVP-HADVVTTTTHKTL 230 (416)
T ss_pred ---cCCCEEEECCCc---CCCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCC-CCC-CCcEEEecCCcCC
Confidence 245566663 33 333333 8999999999999999999985 33221000001 111 34655 678998
Q ss_pred ccCccccccccC-HHHHHhhcCCCccccCCCc-HHHHHHH-HHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 327 GNGIPLGAVVTT-PEIAEVLTRRNYFNTFGGN-PVCTAAG-HAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 327 g~G~pig~v~~~-~~~~~~l~~~~~~~t~~~~-~~~~aaa-~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
+|.+.|+++++ +++++.+......++++.. ...+++. .+.++.+.+ +++.++.+++.+++++.|+++ .+...
T Consensus 231 -~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 307 (416)
T PRK00011 231 -RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER--GFRVV 307 (416)
T ss_pred -CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC--CCeee
Confidence 56788999996 6888777543322233322 2233332 233343322 346677777888888887764 22111
Q ss_pred eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------c-CCCEEEEeCC----CCCCHHHHHHH
Q 011669 402 GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------F-YGNVFRITPP----LCFTKEDADYL 469 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~-~~~~iRi~p~----~~~t~~~id~~ 469 (480)
. -.....++++.+.... .....+.+.|.++||.+..+. . ..+.+|++.. ..+|++|++++
T Consensus 308 ~-~~~~~~~~~i~~~~~~-------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l 379 (416)
T PRK00011 308 S-GGTDNHLVLVDLRSKG-------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEI 379 (416)
T ss_pred e-cCCCCeEEEEeCcccC-------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHH
Confidence 1 0123356666653211 113567888889999997321 1 1346898542 25679999999
Q ss_pred HHHHHHHHh
Q 011669 470 VDVMDYSLS 478 (480)
Q Consensus 470 l~~l~~~l~ 478 (480)
++.|++++.
T Consensus 380 ~~~l~~~~~ 388 (416)
T PRK00011 380 AELIADVLD 388 (416)
T ss_pred HHHHHHHHh
Confidence 999998865
No 253
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=2.2e-16 Score=155.52 Aligned_cols=323 Identities=18% Similarity=0.227 Sum_probs=211.6
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCc
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~y 194 (480)
.+|+|++|+.++.- .|.+..| .....++.+.|...+.... +.+++..|||-|+|+|+..... ++++|++..++.
T Consensus 16 v~~~V~~am~~~~~--~h~s~~F-~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--pgdkVLv~~nG~ 90 (383)
T COG0075 16 VPPRVLLAMARPMV--GHRSPDF-VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--PGDKVLVVVNGK 90 (383)
T ss_pred CCHHHHHHhcCCCC--CCCCHHH-HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCCh
Confidence 46899998876542 2443333 4667788888888887553 6677889999999999986544 688999999998
Q ss_pred ccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCC
Q 011669 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAP 274 (480)
Q Consensus 195 hG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~ 274 (480)
+|....-+.-.. |.....+...+..+++ .+++++++++ .+++++|.+-..-.++|+..|
T Consensus 91 FG~R~~~ia~~~-----------g~~v~~~~~~wg~~v~------p~~v~~~L~~--~~~~~~V~~vH~ETSTGvlnp-- 149 (383)
T COG0075 91 FGERFAEIAERY-----------GAEVVVLEVEWGEAVD------PEEVEEALDK--DPDIKAVAVVHNETSTGVLNP-- 149 (383)
T ss_pred HHHHHHHHHHHh-----------CCceEEEeCCCCCCCC------HHHHHHHHhc--CCCccEEEEEeccCcccccCc--
Confidence 887665443321 2212111112222222 6889999984 236667777666677898887
Q ss_pred ChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCCc----
Q 011669 275 GYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNY---- 350 (480)
Q Consensus 275 ~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~~---- 350 (480)
+++|.++|++||+++|+|-|-+ +| | ..+-.+.||+..-+..--|++++.-.+|.+..+++..+.+....+
T Consensus 150 --l~~I~~~~k~~g~l~iVDaVsS-~G--g-~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~y 223 (383)
T COG0075 150 --LKEIAKAAKEHGALLIVDAVSS-LG--G-EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFY 223 (383)
T ss_pred --HHHHHHHHHHcCCEEEEEeccc-CC--C-cccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCcee
Confidence 9999999999999999999976 54 3 334456666544333455999975567899999998887764321
Q ss_pred -------------ccc-CCCcHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeE-eccceeEE
Q 011669 351 -------------FNT-FGGNPVCTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDV-RGRGFLLG 412 (480)
Q Consensus 351 -------------~~t-~~~~~~~~aaa~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~ 412 (480)
..+ |..+.....+..++|+.+.+|. ..++-+++.+.++++++++ .+....+. .-......
T Consensus 224 lDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al--Gl~~~~~~~~~s~tvta 301 (383)
T COG0075 224 LDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL--GLELFADPERRSPTVTA 301 (383)
T ss_pred ecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--CCccccCcccCCCceEE
Confidence 122 2333344555668898888764 4556666777777777776 22222211 11112222
Q ss_pred EEEecCCCcCCCCHHHHHHHHHHHH-HcCceeeccC--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 413 VEFVTDRQLKTPAKAETLYIMDKMK-EMGVLVGKGG--FYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 413 i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~--~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
+.. |.......+...++ +.|+.+..+- ..+..+||...-..+.+++..++.+|+.++.++
T Consensus 302 ~~~--------P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 302 IKV--------PEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred EEC--------CCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 322 22222223333444 5588887652 235789999888899999999999999998763
No 254
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.78 E-value=2.5e-17 Score=166.36 Aligned_cols=293 Identities=16% Similarity=0.122 Sum_probs=185.2
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
....+.++...+|+++|+++.+. +.+++++||++|+..+++.... +++.|++..+.|++.........
T Consensus 33 ~y~r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~--~gd~Vl~~~~~y~~~~~~~~~~~-------- 100 (369)
T cd00614 33 IYSRIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLK--AGDHVVASDDLYGGTYRLFERLL-------- 100 (369)
T ss_pred eeECCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcC--CCCEEEECCCCcchHHHHHHHHH--------
Confidence 34556789999999999999864 5678889999999999987643 67789998888876442211110
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
...|+....++. +| .+++++.++ +++++|++|+++|++|.+.+ +++|.++|++||+++|+
T Consensus 101 -~~~g~~~~~v~~-------~d----~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~liv 160 (369)
T cd00614 101 -PKLGIEVTFVDP-------DD----PEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVV 160 (369)
T ss_pred -hhcCeEEEEeCC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEE
Confidence 011333322221 12 466777764 26889999999999998876 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccCH-HHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTP-EIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
|+++... ... ...+...|++ +++|.+++ | .+.|++++++ ++++.+...........+|+.+++++..|
T Consensus 161 D~t~~~~-~~~------~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l 233 (369)
T cd00614 161 DNTFATP-YLQ------RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGL 233 (369)
T ss_pred ECCCcch-hcC------ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCC
Confidence 9998532 111 1112345666 78899985 4 7899999987 78777764332233456677777766666
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHH----hcCcee----------eEeccceeEEEEEecCCCcCCCCHHHHHHHHH
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKD----KYGIIG----------DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMD 434 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 434 (480)
+.+ +...++..++..++.+.|++... .||... ...+.|.++.+++.. ....+..+.+
T Consensus 234 ~tl--~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-------~~~~~~~f~~ 304 (369)
T cd00614 234 KTL--PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-------GLEAAKKFLN 304 (369)
T ss_pred CCH--HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-------CHHHHHHHHH
Confidence 532 23455556666666666665321 012110 123568888888742 1223444544
Q ss_pred HHHHcCceeecc-------------------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 435 KMKEMGVLVGKG-------------------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 435 ~l~~~Gv~v~~~-------------------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.|.--.+...-| |...+.+||+..+ |+++.+++-|+++++
T Consensus 305 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al~ 369 (369)
T cd00614 305 ALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQALK 369 (369)
T ss_pred cCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhhC
Confidence 443211111101 1113579999665 678888888887763
No 255
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.77 E-value=3.8e-16 Score=159.93 Aligned_cols=321 Identities=14% Similarity=0.100 Sum_probs=187.0
Q ss_pred CCHHHHHHHHHHH-Hhccccc--ccc--CChHHHHHHH----HHHHhCCCCCCEE-EEeCCHHHHHHHHHHHHHhhcCCc
Q 011669 116 CHPYVVDSIVNQI-KRIQHST--VLY--LNHAIADFAE----ALASKMPGNLKVV-FFTNSGTEANELAIMMARLYTGCN 185 (480)
Q Consensus 116 ~~p~v~~A~~~~~-~~~~~~~--~~~--~~~~~~~l~e----~L~~~~~~~~~~v-~f~~sGseA~~~Alk~ar~~~~~~ 185 (480)
-||+|.+|+...+ .+..... ..+ .++...+|.+ +++++++. +.+ ++++||+.||..++.... .+++
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~--~~alv~~~SG~~A~~~~l~al~--~~GD 115 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGC--DYANVQPHSGSQANGAVYLALL--KPGD 115 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCC--CceEEecCCcHHHHHHHHHHhc--CCCC
Confidence 4799999999985 5543211 111 1577788887 99999864 345 567999999999998653 3677
Q ss_pred eEEEEcCCcccc-cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEE-ccc
Q 011669 186 DIISLRNAYHGN-AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLS-ESI 263 (480)
Q Consensus 186 ~ii~~~~~yhG~-~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~-epi 263 (480)
.|++...+|.+. ..+...... ..+ .....+... ...+..| .+++++.++.. ++++|++ +++
T Consensus 116 ~Vl~~~~~~~~~~~~g~~~~~~-~~~--------~~~~~~~~~-~~~~~~d----~~~le~~l~~~---~~klVi~~~~~ 178 (416)
T PRK13034 116 TILGMSLSHGGHLTHGAKVSLS-GKW--------YNAVQYGVD-RLTGLID----YDEVEELAKEH---KPKLIIAGFSA 178 (416)
T ss_pred EEEEcCccceeeeecCCcceec-cce--------eeeEEcccc-cccCCcC----HHHHHHHHhhc---CCeEEEECCCc
Confidence 888877766441 111111000 000 000000000 0011123 56788777532 4567777 455
Q ss_pred CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCccccccccCH-H
Q 011669 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVVTTP-E 340 (480)
Q Consensus 264 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~v~~~~-~ 340 (480)
.+ ...+ +++|.++|++||+++|+|++|+ +|-.+.... ....+ ..|++ +++|+++|+. -|++++++ +
T Consensus 179 ~g---~~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~-~~~~~-~~Di~~~s~~K~l~g~~-GG~v~~~~~~ 247 (416)
T PRK13034 179 YP---RELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEH-PNPFP-HAHVVTTTTHKTLRGPR-GGMILTNDEE 247 (416)
T ss_pred cc---cccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCC-CCCCC-CceEEEEeCcccCCCCC-CeEEEECcHH
Confidence 43 3334 8999999999999999999986 554431110 11111 25665 5679996533 25566654 4
Q ss_pred HHHhhcCCCccccCC-CcHHHHH-HHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEe
Q 011669 341 IAEVLTRRNYFNTFG-GNPVCTA-AGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416 (480)
Q Consensus 341 ~~~~l~~~~~~~t~~-~~~~~~a-aa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~ 416 (480)
+.+.+......+..+ .+|...+ ++++.++.++. .++.+++.++.++++++|.++ .++.... .....+..+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~--G~~~~~~-~~~t~i~~v~~~ 324 (416)
T PRK13034 248 IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER--GYDLVSG-GTDNHLLLVDLR 324 (416)
T ss_pred HHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc--CCEeccC-CCCCcEEEEEcC
Confidence 545444322222112 2233333 33444554432 345788888999999988765 3322211 123445555553
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------c-CCCEEEEeCCC----CCCHHHHHHHHHHHHHHHh
Q 011669 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------F-YGNVFRITPPL----CFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~-~~~~iRi~p~~----~~t~~~id~~l~~l~~~l~ 478 (480)
.... ....+.+.|.++||++...+ + ....+|++++. .++++|++++++.|++++.
T Consensus 325 ~~~~-------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 325 PKGL-------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCC-------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 3211 13456678888999997421 0 13579999888 6779999999999998875
No 256
>PLN02242 methionine gamma-lyase
Probab=99.77 E-value=5.2e-17 Score=165.78 Aligned_cols=298 Identities=15% Similarity=0.099 Sum_probs=183.4
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|+++|+++.+. +.+++++||++|+..++..... +++.|++..+.|.+..........
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~--~GD~Vl~~~~~Y~~~~~~~~~~~~-------- 137 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCS--SGGHVVASNTLYGGTHALLAHFLP-------- 137 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHhhh--------
Confidence 4556789999999999999853 6678999999999999986643 678899888887543222111000
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .++++++++ ++++++|++|.++|++|.+.+ +++|.++|++||+++|+|
T Consensus 138 ~~~G~~~~~~d~-------~d----~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livD 199 (418)
T PLN02242 138 RKCNITTTFVDI-------TD----LEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVD 199 (418)
T ss_pred hccCceEEEcCC-------CC----HHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEE
Confidence 001333222211 12 567777774 225889999999999998875 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCcceeeecccccc-Ccc-ccccccCHHHHHhhcCCCcc--ccCCCcHHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIP-LGAVVTTPEIAEVLTRRNYF--NTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~-G~p-ig~v~~~~~~~~~l~~~~~~--~t~~~~~~~~aaa~a~L~~ 370 (480)
|+|+.+.. . ...++...-+.++||.+++ |.+ .||+++++++++.+...... ..++..+..+.|++..+..
T Consensus 200 ea~~~~~~-~-----~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l 273 (418)
T PLN02242 200 NTFAPMVL-S-----PARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL 273 (418)
T ss_pred CCCCccCC-C-----HHHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC
Confidence 99974422 1 1122433333478999985 677 58999999988877644322 2234444455555444331
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHh--cCce----------eeE---eccceeEEEEEecCCCcCCCCHHHHHHHHHH
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKDK--YGII----------GDV---RGRGFLLGVEFVTDRQLKTPAKAETLYIMDK 435 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~~--~~~~----------~~v---~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 435 (480)
-.-+...++..++.+++.+.|++...+ +|.. ... .|.|.|+.|++.. ...+..+.+.
T Consensus 274 ~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~--------~~~~~~f~~~ 345 (418)
T PLN02242 274 PHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT--------EERANRLMRY 345 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC--------HHHHHHHHHH
Confidence 111234456667777777777765211 1211 012 3678889999831 1234556665
Q ss_pred HHHc----CceeeccC-------------------------cCCCEEEEeCCCCCCHH-HHHHHHHHHHHHHhhC
Q 011669 436 MKEM----GVLVGKGG-------------------------FYGNVFRITPPLCFTKE-DADYLVDVMDYSLSKM 480 (480)
Q Consensus 436 l~~~----Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~~-~id~~l~~l~~~l~~~ 480 (480)
+.-- .+.+..|+ ...+.+||+..+ | +.|.+++-|+++|++|
T Consensus 346 l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 346 LQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred hhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHh
Confidence 5411 11111111 112578998544 4 3677777777777654
No 257
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.76 E-value=2.5e-16 Score=158.20 Aligned_cols=302 Identities=18% Similarity=0.174 Sum_probs=185.8
Q ss_pred HHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccc
Q 011669 122 DSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201 (480)
Q Consensus 122 ~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~ 201 (480)
+++.+.+....+ +..+...+++++|+++++. +.+++++||++|++.+++..+. .+++.|++...+||+.....
T Consensus 3 ~~~~~~~~~~~~----~~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~-~~gd~vl~~~~~~~~~~~~~ 75 (352)
T cd00616 3 EAVEEVLDSGWL----TLGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGI-GPGDEVIVPSFTFVATANAI 75 (352)
T ss_pred HHHHHHHHcCCc----cCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCC-CCCCEEEeCCcchHHHHHHH
Confidence 345554544322 3467889999999999963 5788999999999999987632 35688999999998764433
Q ss_pred cccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHH
Q 011669 202 MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVY 281 (480)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~ 281 (480)
... |+....++... ..+..| .+++++.++ +++++|++.++ .|...+ +++|.
T Consensus 76 ~~~-------------g~~~~~~~~~~-~~~~~d----~~~l~~~i~----~~~~~v~~~~~---~G~~~~----~~~i~ 126 (352)
T cd00616 76 LLL-------------GATPVFVDIDP-DTYNID----PELIEAAIT----PRTKAIIPVHL---YGNPAD----MDAIM 126 (352)
T ss_pred HHc-------------CCeEEEEecCC-CcCCcC----HHHHHHhcC----cCCeEEEEECC---CCCcCC----HHHHH
Confidence 221 22222222111 112223 567777663 36777777653 465544 89999
Q ss_pred HHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec----cccccCccccccccC-HHHHHhhcCCC-------
Q 011669 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRRN------- 349 (480)
Q Consensus 282 ~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~-~~~~~~l~~~~------- 349 (480)
++|+++|+++|+|++|+ +|... .....+...|+.++| |.+++| +.|+++.+ +++.+.+....
T Consensus 127 ~l~~~~~i~li~D~a~~-~g~~~----~~~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T cd00616 127 AIAKRHGLPVIEDAAQA-LGATY----KGRKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD 200 (352)
T ss_pred HHHHHcCCeEEEECCCC-CCCeE----CCEEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC
Confidence 99999999999999997 43221 111123335666665 999544 45677765 56665543210
Q ss_pred --------ccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe---ccceeEEEEEecC
Q 011669 350 --------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR---GRGFLLGVEFVTD 418 (480)
Q Consensus 350 --------~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~---g~g~~~~i~~~~~ 418 (480)
.+.++..+++.++.++..++.+ +.+.++.+++.+++++.|.++. ....+.... ....++.+.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (352)
T cd00616 201 RFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPE 277 (352)
T ss_pred CCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCc
Confidence 0123345677777777666543 4566777778888888887642 111221111 1122333333210
Q ss_pred CCcCCCCHHHHHHHHHHHHHcCceeeccCc------------------C-------CCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 419 RQLKTPAKAETLYIMDKMKEMGVLVGKGGF------------------Y-------GNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 419 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------------~-------~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
.......+.+.|.++||.++.... . .+.+|+.+....|++||+.++++|
T Consensus 278 ------~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l 351 (352)
T cd00616 278 ------AGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEAL 351 (352)
T ss_pred ------CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHh
Confidence 011246788899999997753210 0 157999999999999999999887
Q ss_pred H
Q 011669 474 D 474 (480)
Q Consensus 474 ~ 474 (480)
+
T Consensus 352 ~ 352 (352)
T cd00616 352 R 352 (352)
T ss_pred C
Confidence 4
No 258
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.76 E-value=8.3e-17 Score=148.40 Aligned_cols=330 Identities=20% Similarity=0.194 Sum_probs=208.4
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR 179 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar 179 (480)
+..|+-+-..+. .-.++++||.++.-.. .-.+..+...+|.+..++.++ .+.-+|+.|||..|..||+.-.
T Consensus 22 ~~vDLRSDTvT~----PTdeMr~am~eA~vgD---dVyGeD~tt~rLE~~vA~l~G--KEAgLFv~SGTmgNllaIm~Hc 92 (384)
T KOG1368|consen 22 RSVDLRSDTVTV----PTDEMRRAMAEASVGD---DVYGEDPTTNRLEQRVAELFG--KEAGLFVPSGTMGNLLAIMVHC 92 (384)
T ss_pred eccccccccccC----ChHHHHHHHhhcccCc---ccccCCccHHHHHHHHHHHhC--ccceeeecccccccHHHHHHHh
Confidence 456666655544 4467888887754321 112346777889999999984 4677999999999999999766
Q ss_pred hhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc----CCCce
Q 011669 180 LYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG----TSGHV 255 (480)
Q Consensus 180 ~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~----~~~~~ 255 (480)
...|...|+-....-|-|..+.++.-+ |+...++.+. +|+-..++++|+.+... +...+
T Consensus 93 ~~rg~eii~gd~~HI~~~E~gg~s~l~-----------gv~~~tv~~e------~dgtm~ledIe~~ir~~~GD~H~p~T 155 (384)
T KOG1368|consen 93 HQRGSEIIVGDRAHIHRYEQGGISQLA-----------GVHVRTVKNE------NDGTMDLEDIEAAIRVPKGDCHMPPT 155 (384)
T ss_pred cCCCceEEeccchheeehhccChhhhc-----------cceeEeeeeC------CCCeeeHHHHHHhhcCCCCCccCCCc
Confidence 543433333334444545444444332 3333332221 22222378899888621 23368
Q ss_pred EEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcc---ccCCCcccccccCCCcce--eeeccccccCc
Q 011669 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA---RTGSHFWGFEAHGVVPDI--VTMAKGIGNGI 330 (480)
Q Consensus 256 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfg---r~G~~~~~~~~~~~~pDi--vt~sK~~g~G~ 330 (480)
+.|.+|..++..|....|-+|+.++.++|++||+-|+.|-+-- |- -.| -+...+.-..|. +|+||++|+
T Consensus 156 ~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasg---V~vk~i~~~fDSVsiCLSKglgA-- 229 (384)
T KOG1368|consen 156 KLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASG---VPVKKICSAFDSVSICLSKGLGA-- 229 (384)
T ss_pred eEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcC---CCHHHHHHhhhhhhhhhhccCCC--
Confidence 9999999776655455699999999999999999999996432 10 001 001111123344 489999976
Q ss_pred ccc-ccccCHHHHHhhcC--CCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcC-ceeeEe-
Q 011669 331 PLG-AVVTTPEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVR- 405 (480)
Q Consensus 331 pig-~v~~~~~~~~~l~~--~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~v~- 405 (480)
|+| .+++++++++..+. ...++.+-...+-++|++-+|+. ....+..-.+....+.+.+++. + +...+.
T Consensus 230 PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~----~~i~v~v~a 303 (384)
T KOG1368|consen 230 PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTP----EEIRVEVPA 303 (384)
T ss_pred CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccc----cceeeecch
Confidence 556 46678888765442 12344455556777777777752 2234444455555555555432 2 223343
Q ss_pred ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 406 GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 406 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
-...|..+.+...+ ..++.+++.+.+.||++.++. ...+||.....+|+++++.++..|.+.
T Consensus 304 ~etNiv~~~l~q~~-------~~~~~l~~~~~k~gi~lm~~~--s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 304 VETNIVNMVLCQAR-------LTAEELCKFLEKNGILLMGGA--SRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred hhcceeeeeccccc-------CCHHHHHHHHHHCCeEEeecc--ccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 44566666664432 236788999999999998765 345899999999999999999999543
No 259
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=2.9e-16 Score=160.87 Aligned_cols=223 Identities=14% Similarity=0.067 Sum_probs=146.1
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
.++|.++....|.++|+++.+. +.+++++||++|+..++..... +++.|++.++.|.+.........
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~--~Gd~Vv~~~p~Y~~~~~~~~~~l--------- 143 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVR--PGDVILHSQPLYGGTETLLAKTF--------- 143 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHH---------
Confidence 4567888899999999999853 4688999999999988876544 67889999999987644321110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc-CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHH------h
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG-TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK------A 287 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~-~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~------~ 287 (480)
...|+..+.+++. .| .+++++.++.. ..+++++|++|..+|++|.+.. +++|.++|++ +
T Consensus 144 ~~~Gi~~v~~~~~------~d----~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~ 209 (427)
T PRK07049 144 RNFGVGAVGFADG------LS----EAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGH 209 (427)
T ss_pred HhcCcEEEEEeCC------CC----HHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccC
Confidence 0124433333321 22 34555555321 1236889999999999998865 6666666665 8
Q ss_pred CCEEEEcccccCccccCCCcccccccCCCccee--eeccccc--cCccccccccCHHHHHhhcCCCccccCCCcHHHHHH
Q 011669 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIG--NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (480)
Q Consensus 288 gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g--~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa 363 (480)
++++|+||++.++.... . . .++ .|++ ++||.++ +|+++||+++++++++.+.........+.+|+.+.+
T Consensus 210 ~~~vvvDety~~~~~~~--p--l-~~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l 282 (427)
T PRK07049 210 RPIIACDNTLLGPVFQK--P--L-EHG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWM 282 (427)
T ss_pred CCEEEEECCccccccCC--c--c-ccC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 99999999986542211 1 1 123 3554 7999999 479999999999988877653322334467887777
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 011669 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
++..|+.+ ....++..+....+.+.|++
T Consensus 283 ~~r~L~tl--~~R~~~~~~~a~~la~~L~~ 310 (427)
T PRK07049 283 LGRSLETL--VLRMERANRNARAVAEFLRD 310 (427)
T ss_pred HHcCCChH--HHHHHHHHHHHHHHHHHHHh
Confidence 77666543 22233344445555555544
No 260
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.74 E-value=1.8e-16 Score=159.34 Aligned_cols=310 Identities=14% Similarity=0.124 Sum_probs=180.7
Q ss_pred CCCCHHHHHHHHHHHHhccccccc--c-----CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh--cCC
Q 011669 114 GHCHPYVVDSIVNQIKRIQHSTVL--Y-----LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--TGC 184 (480)
Q Consensus 114 Gh~~p~v~~A~~~~~~~~~~~~~~--~-----~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~--~~~ 184 (480)
|..++.|.+++.+.+......... + ..+...+++++|+++++.+.++|+|++|+++|++.+++..... .++
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g 87 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKG 87 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCC
Confidence 456799999999887543211111 0 1134678999999999877778999999999999999866432 122
Q ss_pred -ceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEccc
Q 011669 185 -NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (480)
Q Consensus 185 -~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi 263 (480)
+.|++. ...|........... ..|+....++.... +..| .+++++.++ +++++|+++.+
T Consensus 88 ~~~vi~~-~~~~~s~~~~~~~~~---------~~G~~v~~v~~~~~--~~~d----~~~l~~~l~----~~~~lv~~~~~ 147 (353)
T TIGR03235 88 KKHIITS-AIEHPAVLEPIRALE---------RNGFTVTYLPVDES--GRID----VDELADAIR----PDTLLVSIMHV 147 (353)
T ss_pred CCeeeEc-ccccHHHHHHHHHHH---------hcCCEEEEEccCCC--CcCC----HHHHHHhCC----CCCEEEEEEcc
Confidence 445554 444443222221110 01333333332211 1123 567777764 35788999999
Q ss_pred CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHH
Q 011669 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEI 341 (480)
Q Consensus 264 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~ 341 (480)
++++|.+.+ +++|.++|++||+++|+|++|. +|... ++.....+|++++| |.+| ...+|+++++++.
T Consensus 148 ~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~~-----~~~~~~~~D~~~~s~~K~~g-p~g~g~l~~~~~~ 216 (353)
T TIGR03235 148 NNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKIT-----VDLSADRIDLISCSGHKIYG-PKGIGALVIRKRG 216 (353)
T ss_pred cCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCcc-----ccccccCCCEEEeehhhcCC-CCceEEEEEccCc
Confidence 999999987 9999999999999999999986 44321 22223357888777 9754 2347889888874
Q ss_pred HHh--hcCCCc-------cccCCCcHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe-ccce
Q 011669 342 AEV--LTRRNY-------FNTFGGNPVCTAAGHAVLKVIQK--DKLQNNAHVVGSYLKERLTALKDKYGIIGDVR-GRGF 409 (480)
Q Consensus 342 ~~~--l~~~~~-------~~t~~~~~~~~aaa~a~L~~i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~-g~g~ 409 (480)
... +.+... ......|+...++..++|+.+.+ ++..++.+++.++++++|++. .+..+.... ....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~--g~~~~~~~~~~~~~ 294 (353)
T TIGR03235 217 KPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL--GVKLNGDPAETIPH 294 (353)
T ss_pred ccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC--CeEEeCCcccccCC
Confidence 322 221101 11223445556666677776543 355667777777777776552 111111111 1122
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCC------CEEEEeCCCCCCHHHHHH
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG------NVFRITPPLCFTKEDADY 468 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~------~~iRi~p~~~~t~~~id~ 468 (480)
+..+.+. . .....+.+.|.+ ||.+.+|.... ..+|.+ +..+++++..
T Consensus 295 i~~~~~~--~-------~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~--~g~~~~~~~~ 347 (353)
T TIGR03235 295 ILNFSID--G-------VNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQA--MGLDTDRARG 347 (353)
T ss_pred EEEEEeC--C-------cCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHH--cCCCHHHhCc
Confidence 3333321 1 124567777754 89998763221 134444 5566655543
No 261
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=2.4e-15 Score=156.14 Aligned_cols=286 Identities=20% Similarity=0.235 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEe
Q 011669 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHA 222 (480)
Q Consensus 143 ~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (480)
..++.+.++++++.+.+++.+++||+++++.++...+ ..++++|++.++.|.. ....+..... ..|....
T Consensus 114 ~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~-~~~g~~Vlv~~~~~~~-~~~~~~~~~~--------~~G~~~~ 183 (447)
T PRK00451 114 IFEYQTMICELTGMDVANASMYDGATALAEAALMAVR-ITKRKKVLVSGAVHPE-YREVLKTYLK--------GQGIEVV 183 (447)
T ss_pred HHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH-hcCCCEEEEeCccCHH-HHHHHHHHHH--------hCCcEEE
Confidence 4455577789988777789999999998887776443 3366788887765533 3322221100 0122222
Q ss_pred cCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE--cccccCc
Q 011669 223 LNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA--DEVQAGF 300 (480)
Q Consensus 223 ~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~--DEv~tgf 300 (480)
.+|.... ..| .+++++.++ +++++|++... +++|.+.+ +++|.++|+++|+++|+ |.+..|+
T Consensus 184 ~v~~~~~---~~d----~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~ 247 (447)
T PRK00451 184 EVPYEDG---VTD----LEALEAAVD----DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL 247 (447)
T ss_pred EecCCCC---CCC----HHHHHHhcC----CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc
Confidence 2222111 112 577777774 36778777765 66888865 99999999999999998 6553221
Q ss_pred cccCCCcccccccCCCcceee-----eccccc-cCccccccccCHHHHHhhcCC--------------------------
Q 011669 301 ARTGSHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRR-------------------------- 348 (480)
Q Consensus 301 gr~G~~~~~~~~~~~~pDivt-----~sK~~g-~G~pig~v~~~~~~~~~l~~~-------------------------- 348 (480)
.. ... ....|+++ |||.+. +|+++|++++++++++.+...
T Consensus 248 --~~----~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (447)
T PRK00451 248 --LK----PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIR 319 (447)
T ss_pred --CC----Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccc
Confidence 11 011 23456664 566665 678999999999988774211
Q ss_pred --CccccCCCcH-HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEE--EEEecCCC
Q 011669 349 --NYFNTFGGNP-VCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG--VEFVTDRQ 420 (480)
Q Consensus 349 --~~~~t~~~~~-~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~--i~~~~~~~ 420 (480)
....+++.+. +...++.++|+.+.++ +..++..++.++++++|+++ +.+... ..+.+.. +.+ +
T Consensus 320 ~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----~g~~~~-~~~~~~~~~v~~--~-- 390 (447)
T PRK00451 320 REKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI----GGVELF-DGPFFNEFVVRL--P-- 390 (447)
T ss_pred cccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc----CCEEec-CCCeEEEEEEec--C--
Confidence 0111222222 2213333345444332 34455566666666666553 322222 2222222 222 1
Q ss_pred cCCCCHHHHHHHHHHHHHcCceee-ccCcC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 421 LKTPAKAETLYIMDKMKEMGVLVG-KGGFY----GNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 421 ~~~~~~~~~~~~~~~l~~~Gv~v~-~~~~~----~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
. ...++.+.|.++|+... ++..+ .+++|++++..+|+++++++++.|++++
T Consensus 391 ----~--~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 ----K--PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ----C--CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 14678899999988743 11111 3689999988899999999999999865
No 262
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.73 E-value=3.6e-16 Score=158.33 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=151.1
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...+|.++...+|+++|++..+. +.+++++||++|+..+++.... ++++||+..+.| |.+...+...
T Consensus 47 ~y~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~~-~~t~~~~~~~-------- 113 (380)
T TIGR01325 47 VYSRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQ--AGDHVVASRSLF-GSTVGFISEI-------- 113 (380)
T ss_pred ceecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhC--CCCEEEEecCCc-chHHHHHHHH--------
Confidence 34567788899999999999854 5678999999999999976533 567788766544 4433222110
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
....|+....++. +| .+++++.++ +++++|++|.++++.|.+.+ +++|.++|+++|+++|+
T Consensus 114 ~~~~g~~v~~v~~-------~d----~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~liv 174 (380)
T TIGR01325 114 LPRFGIEVSFVDP-------TD----LNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVV 174 (380)
T ss_pred HHHhCCEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEE
Confidence 0011333222221 12 456766664 36789999998888888876 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
||+|..+. .. . .....+|++ +++|.+++ |.++ |++++++++++.+...........+|..++.++..++
T Consensus 175 D~a~~~~~-~~-~-----pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 175 DNVFATPV-LQ-Q-----PLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLE 247 (380)
T ss_pred ECCCcccc-cC-C-----chhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccC
Confidence 99986321 11 1 112346777 47899996 6666 6788888887766543211122234565555555555
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhH--H--hcCce----------eeEeccceeEEEEEe
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALK--D--KYGII----------GDVRGRGFLLGVEFV 416 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~--~--~~~~~----------~~v~g~g~~~~i~~~ 416 (480)
.+.. ..++..+...++.+.|++.. + .||.. ....|.|.|+.|++.
T Consensus 248 tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 248 TLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred cHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 4432 34444555555555555421 0 02211 012467888899884
No 263
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.72 E-value=2.1e-15 Score=156.28 Aligned_cols=340 Identities=14% Similarity=0.070 Sum_probs=195.0
Q ss_pred EEEeccCCcccccCCCCCHHHHHHHHHHHHhc---cccccccC--C---hHHHH-HHHHHHHhCCCCCCEEEEe---CCH
Q 011669 100 RYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI---QHSTVLYL--N---HAIAD-FAEALASKMPGNLKVVFFT---NSG 167 (480)
Q Consensus 100 ~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~---~~~~~~~~--~---~~~~~-l~e~L~~~~~~~~~~v~f~---~sG 167 (480)
+.|.+..+-. ...|.|.+++...+.+. ++....+. . ..+++ .++++++.++.+.+++.|+ +||
T Consensus 35 ~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sg 109 (452)
T PTZ00094 35 EGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSG 109 (452)
T ss_pred cCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCch
Confidence 4555554432 35699999998877542 12222221 1 22332 4567888888766666677 799
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHH
Q 011669 168 TEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLI 247 (480)
Q Consensus 168 seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i 247 (480)
++||..+++.... +++.|++. ..-||.......... ..+.......+....++....+ ..| .+++++++
T Consensus 110 t~an~~v~~al~~--~gd~Ii~~-~~ehg~~l~~~~~l~--~~~~~~~~~~~~~~~~~~~~~g--~id----~~~L~~~l 178 (452)
T PTZ00094 110 SPANFAVYTALLQ--PHDRIMGL-DLPSGGHLTHGFYTA--KKKVSATSIYFESLPYQVNEKG--LID----YDKLEELA 178 (452)
T ss_pred HHHHHHHHHHhcC--CCCEEEec-ccccCCccccccccc--ccccccceeeeeeeecccCCCC--CcC----HHHHHHHH
Confidence 9999998886632 45666664 445665543321100 0000000011222222211111 123 67888888
Q ss_pred HccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cc
Q 011669 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KG 325 (480)
Q Consensus 248 ~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~ 325 (480)
+.. +.+.+++. .+..|...+ +++|.++|+++|+++++|++|+ +|..+...+..... ..|++++| |+
T Consensus 179 ~~~---~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~~~--~~D~l~~S~hK~ 246 (452)
T PTZ00094 179 KAF---RPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSPFP--YADVVTTTTHKS 246 (452)
T ss_pred HHh---CCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCCCC--CCcEEEcCCccC
Confidence 642 23345542 344666776 9999999999999999999996 66544122111111 46888665 98
Q ss_pred cccCccccccccCHHHHHhhcCC---CccccC--CCcHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHh
Q 011669 326 IGNGIPLGAVVTTPEIAEVLTRR---NYFNTF--GGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDK 397 (480)
Q Consensus 326 ~g~G~pig~v~~~~~~~~~l~~~---~~~~t~--~~~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~ 397 (480)
++|... |++++++++.+.+... ..+..+ +.++...++..++|+.+.. +++.+++.++.+++++.|.+. .
T Consensus 247 l~GP~G-g~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--g 323 (452)
T PTZ00094 247 LRGPRS-GLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--G 323 (452)
T ss_pred CCCCCc-eEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC--C
Confidence 876442 6677766554322211 111122 3456677777788888744 346778888888888887663 2
Q ss_pred cCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------cCCCEEEEeCCCCCC----HHHH
Q 011669 398 YGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------FYGNVFRITPPLCFT----KEDA 466 (480)
Q Consensus 398 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iRi~p~~~~t----~~~i 466 (480)
+.+...- .......+.+.... .....+...|.++||.+...+ ...+.+|++++..+| ++|+
T Consensus 324 ~~v~~~~-~~~~~~~v~~~~~~-------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di 395 (452)
T PTZ00094 324 YDLVTGG-TDNHLVLVDLRPFG-------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDF 395 (452)
T ss_pred cEEecCC-CCCceEeecCCcCC-------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHH
Confidence 2222110 01112333332211 123567777777899995321 113689999977765 9999
Q ss_pred HHHHHHHHHHHh
Q 011669 467 DYLVDVMDYSLS 478 (480)
Q Consensus 467 d~~l~~l~~~l~ 478 (480)
+++++.|.+++.
T Consensus 396 ~~l~~~l~~~~~ 407 (452)
T PTZ00094 396 KFVADFLDRAVK 407 (452)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 264
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.72 E-value=7.4e-16 Score=156.40 Aligned_cols=289 Identities=18% Similarity=0.141 Sum_probs=179.3
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..+|.++...+|+++|+++.+. +..++++||+.|+..++.... .+++.||+..+.|. .+...+.....
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~--~~al~~~sG~~Ai~~~l~al~--~~Gd~Vv~~~~~y~-~~~~~~~~~~~------- 122 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGG--EEALAFGSGMAAISATLIGFL--KAGDHIICSNGLYG-CTYGFLEVLEE------- 122 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEcCCcHH-HHHHHHHHHHh-------
Confidence 4567788899999999999964 456788999999988886543 36678888777663 33332221110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
..++.....+. .| .+++++.++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|+|
T Consensus 123 -~~gi~~~~~~~-------~d----~~~l~~~i~----~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD 182 (386)
T PRK06767 123 -KFMITHSFCDM-------ET----EADIENKIR----PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVD 182 (386)
T ss_pred -hcCeEEEEeCC-------CC----HHHHHHhhC----cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEE
Confidence 01222211110 12 466777664 36789999998899998876 899999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHHhhcCCCcccc-CCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNT-FGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~~l~~~~~~~t-~~~~~~~~aaa~a~L~ 369 (480)
|+|.. +..+ .. . ..+ .|++ +++|.+++ |.++ |+++++++.++.+........ -..+|+.+++++..|+
T Consensus 183 ~a~a~-~~~~-~p--l-~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 183 NTFCS-PYLQ-RP--L-ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK 255 (386)
T ss_pred CCCcc-cccC-Cc--h-hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC
Confidence 99852 2222 11 1 123 3555 56799986 7775 889899887665432111111 1125666666555554
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE------------eccceeEEEEEecCCCcCCCCHHHHHHHHHHHH
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 437 (480)
.+ +...++.+++..++.+.|++. +.+..+ ++.|.++.|++... ......+.+.|+
T Consensus 256 tl--~~r~~~~~~~a~~la~~L~~~----p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-------~~~~~~f~~~l~ 322 (386)
T PRK06767 256 TL--AVRMDRHCDNAEKIVSFLKNH----DAVEGVWYPEGELASRQMKRGGGVISFSIKGG-------KEETQAFINDLH 322 (386)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHcC----CCccEEECCCcHHHHHhCCCCCceEEEEEcCC-------HHHHHHHHHhCC
Confidence 33 223455566666666666543 433322 35677888887321 223567788877
Q ss_pred HcCceeeccCc-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 438 EMGVLVGKGGF-------------------------YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 438 ~~Gv~v~~~~~-------------------------~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..++.+.-|+. ..+.+||+..+ |+.+.+++-|+++|.+
T Consensus 323 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 323 FITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred ccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 66666544421 12578998554 4566677777777653
No 265
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=1.3e-15 Score=153.39 Aligned_cols=280 Identities=18% Similarity=0.129 Sum_probs=172.8
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..+|+++...+|+++|+++. + +.+++++||++|+..++... ..++++||+.+++|++.........
T Consensus 45 y~ry~~p~~~~Le~~lA~l~--~-~~~v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l--------- 110 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE--G-AEALVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYL--------- 110 (366)
T ss_pred eECCCCccHHHHHHHHHHHc--C-CCEEEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHH---------
Confidence 45678899999999999998 3 34678899999999888654 2367899999999977654332110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .+. .+... +++++|++|..+|++|.+.+ +++|.++|+++|+++|+|
T Consensus 111 ~~~G~~v~~v~~-------~~~------~~~~~-----~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD 168 (366)
T PRK07582 111 APLGVTVREAPT-------AGM------AEAAL-----AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVD 168 (366)
T ss_pred hcCeEEEEEECC-------CCh------HHHhc-----cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEE
Confidence 011444333322 110 11111 36788888888888887665 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc--CccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|... .|... . +...|++ +++|.++| |+++||++++ +++++.+...........+|+.+..++..|+
T Consensus 169 ~t~~~~--~~~~p--~---~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~ 241 (366)
T PRK07582 169 NTTATP--LGQRP--L---ELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLG 241 (366)
T ss_pred CCCCCc--cccCc--h---hcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccc
Confidence 998421 12111 1 2234665 57899975 6899999974 7777766543222333456777776666665
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE------------------eccceeEEEEEecCCCcCCCCHHHHHH
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------------RGRGFLLGVEFVTDRQLKTPAKAETLY 431 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~~~~~~~~~~~~~~~~ 431 (480)
.+ +-..++..++...+.+.|++. +.+..| .|.|.++.|++. + ...
T Consensus 242 tl--~~R~~~~~~na~~la~~L~~~----p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~----------~~~ 304 (366)
T PRK07582 242 TL--GLRFARQCANALAVAELLAGH----PAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-D----------AAA 304 (366)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHhC----CCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-C----------HHH
Confidence 32 223355556666666666543 333222 256778888873 1 122
Q ss_pred HHHHHHHcCceeec---cC--------------cCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 432 IMDKMKEMGVLVGK---GG--------------FYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 432 ~~~~l~~~Gv~v~~---~~--------------~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+.+.+...++.... |+ ...+.||++..+...++.|+.+.++|+
T Consensus 305 ~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 305 AERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred HHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 33444444554421 11 113579999887665555555544443
No 266
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=1.5e-15 Score=153.25 Aligned_cols=238 Identities=18% Similarity=0.101 Sum_probs=149.5
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...+|.++...+|+++|+++.+. +..++++||++|+..++.+ ..++++||+.++.|++.........
T Consensus 45 ~y~r~~~pt~~~le~~la~l~g~--~~~~~~~sG~~ai~~~~~l---l~~Gd~Vl~~~~~y~~t~~~~~~~~-------- 111 (366)
T PRK08247 45 DYSRTGNPTRGVLEQAIADLEGG--DQGFACSSGMAAIQLVMSL---FRSGDELIVSSDLYGGTYRLFEEHW-------- 111 (366)
T ss_pred cccCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHH---hCCCCEEEEecCCcCcHHHHHHHHh--------
Confidence 34678899999999999999865 3457899999999977642 2366899999999976322111100
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
...|+....++. .| .++++++++ +++++|++|.++|+.|.+.. +++|.++|++||+++|+
T Consensus 112 -~~~G~~v~~vd~-------~d----~~~l~~~i~----~~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIv 171 (366)
T PRK08247 112 -KKWNVRFVYVNT-------AS----LKAIEQAIT----PNTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIV 171 (366)
T ss_pred -hccCceEEEECC-------CC----HHHHHHhcc----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEE
Confidence 011333322221 12 467777774 26788888877777665444 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceeeecccccc--CccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~--G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
||+|... ..+ .. . ..+...-+.+++|.++| ++..|+++++ +++.+.+...........+|+.+..++..|+.
T Consensus 172 D~t~~~~-~~~-~p--~-~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t 246 (366)
T PRK08247 172 DNTFYTP-VLQ-RP--L-EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT 246 (366)
T ss_pred ECCCccc-ccc-Cc--h-hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc
Confidence 9998411 111 11 1 12322333478899985 4788999987 66776665433334445677777776666653
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee--EeccceeEEEEE
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD--VRGRGFLLGVEF 415 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--v~g~g~~~~i~~ 415 (480)
+. ...++.+++.+.+.+.| ++++.+.. .++.|.|+.+++
T Consensus 247 l~--~r~~~~~~~a~~l~~~L----~~~p~v~~v~~P~~gg~~sf~~ 287 (366)
T PRK08247 247 LA--LRMRQHEENAKAIAAFL----NEQPGVTDVLYPGRGGMLSFRL 287 (366)
T ss_pred HH--HHHHHHHHHHHHHHHHH----HhCCCeeEEecCCcCcEEEEEE
Confidence 32 22233344444444444 44555543 344677887776
No 267
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.71 E-value=2.4e-15 Score=147.60 Aligned_cols=203 Identities=19% Similarity=0.257 Sum_probs=142.1
Q ss_pred CEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-ccccc-cC---ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVL-YL---NHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~-~~---~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~ 173 (480)
..|||..+ .|-++|.|.+|+.+.+.... ..... |. ....++-++.++++++.+.++|+||+++||+|.+
T Consensus 44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 46888654 35678999999999877642 11112 32 2346788899999999888889999999999999
Q ss_pred HHHH-HHhhcC-Cc-eEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 174 AIMM-ARLYTG-CN-DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 174 Alk~-ar~~~~-~~-~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
+++- ++.+.. .+ .||.++..|-.-..+...+-... ..+..+|+++ ++....+.+++.|+
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g--------~~Vt~lpv~~--------~~~~d~~~~~~~i~-- 179 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG--------LEVTYLPVED--------SGLVDISKLREAIR-- 179 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhcC--------eEEEEeccCc--------cccccHHHHHHhcC--
Confidence 9985 454332 33 55555544433333332222111 1233344332 22222677777775
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--ccccc
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN 328 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~ 328 (480)
.++++|+++.++++.|+++| +++|.++|+++|+.+++|.+|. .|.. ..+-.++.+|+.+++ |.+|.
T Consensus 180 --~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i-----~vDV~eln~D~~s~s~HK~ygp 247 (428)
T KOG1549|consen 180 --SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI-----PVDVQELNADFLSISAHKIYGP 247 (428)
T ss_pred --CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc-----cccHHHcCchheeeecccccCC
Confidence 38999999999999999999 9999999999999999999996 4422 255667788999887 88874
Q ss_pred -CccccccccCH
Q 011669 329 -GIPLGAVVTTP 339 (480)
Q Consensus 329 -G~pig~v~~~~ 339 (480)
| +|++++++
T Consensus 248 ~~--iGaLYvr~ 257 (428)
T KOG1549|consen 248 PG--IGALYVRR 257 (428)
T ss_pred Cc--ceEEEEcc
Confidence 4 89998886
No 268
>PRK06460 hypothetical protein; Provisional
Probab=99.70 E-value=1.9e-15 Score=152.68 Aligned_cols=295 Identities=15% Similarity=0.121 Sum_probs=172.4
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
|...+..++...+|+++|++..+.. . .+.++||++|+..++..... ++++||+..+.|.+........
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~-~-~v~~~sG~~ai~~~l~al~~--~Gd~Vl~~~~~~~~ty~~~~~~-------- 104 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAE-M-GVAFSSGMGAISTTALALLK--PGNSVLVHRDMFGRSYRFFTDY-------- 104 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCC-c-EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCCcCcHHHHHHHH--------
Confidence 3445667888999999999998753 3 34558889999988875533 5678888766553211100000
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
....|+....++. ++ .+.++++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|
T Consensus 105 -~~~~G~~v~~~~~-------~~----~~~l~~~~~----~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vi 164 (376)
T PRK06460 105 -LKNWGVNVDASNP-------GS----DNIIEKAKS----KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILI 164 (376)
T ss_pred -HHhhCcEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 0011333222221 11 123444332 36789999999999998887 8899999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eecccccc--CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
+||+|..+ ... . .. .++ .|++ +++|.++| +.++|++++++++++.+.......+.+.+|..+..++..+
T Consensus 165 vDea~~~~-~~~-~--~l-~~~--~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~ 237 (376)
T PRK06460 165 VDATFSTP-INQ-K--PL-ELG--ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGI 237 (376)
T ss_pred EECCcCcc-ccC-C--hh-hcC--CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhch
Confidence 99998632 111 1 11 123 4555 68899974 3679999999999887764332233344555544444444
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHH----hcCcee----------eEeccceeEEEEEecCCCcCCCCHHHHHHHHH
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKD----KYGIIG----------DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMD 434 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~~----------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 434 (480)
+.++ ...+++.+..+++.+.|++... .||... ...|.|.|+.|++..+ ......+.+
T Consensus 238 ~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~-------~~~~~~~~~ 308 (376)
T PRK06460 238 KTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG-------QESALKVMK 308 (376)
T ss_pred hhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc-------HHHHHHHHH
Confidence 4332 3455566666666666654310 011110 1246788888988421 122344444
Q ss_pred HHH--HcCceee--------cc---------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 435 KMK--EMGVLVG--------KG---------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 435 ~l~--~~Gv~v~--------~~---------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.|. ..+.-.+ |. |...+.|||+..+ ||.+.+++-|+++|.+
T Consensus 309 ~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 309 SLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALST 374 (376)
T ss_pred hCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 442 1111111 10 1123679998554 4666777777777654
No 269
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.70 E-value=5.2e-15 Score=150.79 Aligned_cols=290 Identities=13% Similarity=0.102 Sum_probs=180.4
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+.+.+|.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.||+..+.|.+.. ......
T Consensus 56 ~~Y~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll--~~Gd~Vl~~~~~y~~~~-~~~~~~------- 123 (400)
T PRK06234 56 YIYSRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSAL--KAGDHVVASDTLYGCTF-ALLNHG------- 123 (400)
T ss_pred CcccCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHh--CCCCEEEEecCccchHH-HHHHHH-------
Confidence 345567789999999999999964 467899999999998886543 36778888887664322 221100
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh--CCE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--GGL 290 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--gil 290 (480)
....|+....++. .| .+++++.++ +++++|++|.++|++|.+.+ +++|.++|+++ |++
T Consensus 124 -~~~~G~~v~~vd~-------~d----~e~l~~~i~----~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~ 183 (400)
T PRK06234 124 -LTRYGVEVTFVDT-------SN----LEEVRNALK----ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECL 183 (400)
T ss_pred -HhhCCeEEEEECC-------CC----HHHHHHHhc----cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCE
Confidence 0112343333321 12 567777775 36789999998899998876 99999999997 999
Q ss_pred EEEcccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHHhhcCC--CccccCCCcHHHHHHH
Q 011669 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAG 364 (480)
Q Consensus 291 lI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa 364 (480)
+|+||+|... ..+ .. . +...|++ +++|.+++ |.++ ||+++++++++.+... ....+...+|..++.+
T Consensus 184 livDea~~~~-~~~-~~--l---~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 184 VFVDNTFCTP-YIQ-RP--L---QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLI 256 (400)
T ss_pred EEEECCCCch-hcC-Cc--h---hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999998632 222 11 1 2234555 67899985 7765 8999999988876532 1123345677877777
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEecCCCcCCCCH
Q 011669 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFVTDRQLKTPAK 426 (480)
Q Consensus 365 ~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~~~~~~~~~~~ 426 (480)
+..|+.+ +...++..++..++.+.|++ ++.+.. ..+.|.++.|++... .
T Consensus 257 ~~~l~tl--~~r~~~~~~na~~~a~~L~~----~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-------~ 323 (400)
T PRK06234 257 IRGMKTL--QIRMEKHCKNAMKVAKFLES----HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-------V 323 (400)
T ss_pred HhccCcH--HHHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-------H
Confidence 7666533 23344455555555555543 332211 235677888887421 1
Q ss_pred HHHHHHHHHHHHcCceeeccC-------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 427 AETLYIMDKMKEMGVLVGKGG-------------------------FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 427 ~~~~~~~~~l~~~Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
....++.+.|.-.++...-|+ ...+.+||+..+. +.+.+++-|+++|+
T Consensus 324 ~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE----~~~dl~~dl~~al~ 396 (400)
T PRK06234 324 EEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLE----DVDDIIADLKQALD 396 (400)
T ss_pred HHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCC----CHHHHHHHHHHHHH
Confidence 234556666654443332221 1135799996655 44555555555544
No 270
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=5.5e-15 Score=150.20 Aligned_cols=239 Identities=16% Similarity=0.126 Sum_probs=158.0
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...++.++...+|+++|+++.+. +.+++++||++|+..++..... +++.||+..+.|++........
T Consensus 56 ~~y~r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~--~GD~Vi~~~~~y~~~~~~~~~~-------- 123 (398)
T PRK08249 56 HIYSRNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLK--PGDRVVSIKDTYGGTNKIFTEF-------- 123 (398)
T ss_pred ccccCCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHHHH--------
Confidence 444567789999999999999864 5678889999999999875433 6789999999997632211110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
....|+....++. .| .++++++++ +++++|++|.++|++|.+.+ +++|.++|++||+++|
T Consensus 124 -~~~~Gi~v~~vd~-------~d----~e~l~~~i~----~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~li 183 (398)
T PRK08249 124 -LPRMGVDVTLCET-------GD----HEQIEAEIA----KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVV 183 (398)
T ss_pred -HhhCCeEEEEcCC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEE
Confidence 0112333332221 12 467777774 26789999988888998876 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
+|++|..+. .. .. .....|++ +++|.+++ |-++ |++++++++++.+...........+|+.++.++..|
T Consensus 184 vD~t~a~~~-~~-~~-----l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l 256 (398)
T PRK08249 184 VDNTFATPI-NQ-NP-----LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM 256 (398)
T ss_pred EECCcCccc-cC-Cc-----hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc
Confidence 999997432 11 11 11234555 67899986 5555 677788888877754333344556788777777777
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
+.+. ...++..++...+.+.|++ ++.+.. ..|.|.++.|++.
T Consensus 257 ~tL~--~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 257 KTLK--LRVRQQQESAMALAKYLQT----HPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred chHH--HHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 6552 2334445555555555554 332221 2466888888884
No 271
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=9.8e-15 Score=134.92 Aligned_cols=303 Identities=14% Similarity=0.118 Sum_probs=183.1
Q ss_pred cCChHHHHHHHHHHHhCCCCC--CEEEEeCCHHHHHHHHHHHHHhhc--CC-ce-EEEEcCCcccccccccccccCCCcc
Q 011669 138 YLNHAIADFAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLYT--GC-ND-IISLRNAYHGNAAGTMGATAQSNWK 211 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~--~~v~f~~sGseA~~~Alk~ar~~~--~~-~~-ii~~~~~yhG~~~~~~~~~~~~~~~ 211 (480)
+....+..+++.|.+.++.++ +++.+||+...|...+..+.-.++ |. ++ ++-..+-|-|+....+---.--.++
T Consensus 75 G~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~k 154 (417)
T COG3977 75 GKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAK 154 (417)
T ss_pred chhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeecc
Confidence 345667788888888887554 589999999888887776543221 22 23 3345788888776655322111111
Q ss_pred ccccCCCeeEecC-CCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCE
Q 011669 212 FNVVQTGVHHALN-PDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290 (480)
Q Consensus 212 ~~~~~~g~~~~~~-p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gil 290 (480)
. .++..+. ...|+. | .++|+ ..+.+.+|++.-..+++|.+. .++.+.+|.+++++||+.
T Consensus 155 P-----~iel~~~g~FKY~v----D----F~~l~------i~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giP 214 (417)
T COG3977 155 P-----NIELLPAGQFKYHV----D----FEHLH------IGESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIP 214 (417)
T ss_pred C-----Ccccccccceeecc----C----HHHcc------cccccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCc
Confidence 1 1111110 001111 1 22321 135889999998888888775 888899999999999999
Q ss_pred EEEcccccCccccCCCcccccccCC----Cccee-e--eccccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHH
Q 011669 291 CIADEVQAGFARTGSHFWGFEAHGV----VPDIV-T--MAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363 (480)
Q Consensus 291 lI~DEv~tgfgr~G~~~~~~~~~~~----~pDiv-t--~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa 363 (480)
+|.|.+|. .=..| +-..++ .++++ | +||.=-.|.|+|.+++.+++++.+.......+.....++.|.
T Consensus 215 liIDnAYg-~PFP~-----iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Ai 288 (417)
T COG3977 215 LIIDNAYG-VPFPG-----IIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAI 288 (417)
T ss_pred EEEecccC-CCCCc-----eecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHH
Confidence 99999984 31222 222222 24444 4 456433789999999999999988764322333333444455
Q ss_pred HHHHHHHhhhhHHHHHHHH--------HHHHHHHHHHHhHHhcCceeeEeccce-eEEEEEecCCCcCCCCHHHHHHHHH
Q 011669 364 GHAVLKVIQKDKLQNNAHV--------VGSYLKERLTALKDKYGIIGDVRGRGF-LLGVEFVTDRQLKTPAKAETLYIMD 434 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~--------~~~~l~~~L~~l~~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~ 434 (480)
+...++ +.++.+-..+ ..+.-.+.|++..-.++.. -.++.|. |+|+.|.+-+ .....+.+
T Consensus 289 a~~mie---~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLP-------Itt~~LYq 357 (417)
T COG3977 289 AAEMIE---SGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLP-------ITTEELYQ 357 (417)
T ss_pred HHHHhh---cchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCC-------CCHHHHHH
Confidence 544443 3222222222 2222222222222122222 2355555 5577664322 23678999
Q ss_pred HHHHcCceeeccCcC-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 435 KMKEMGVLVGKGGFY-----------GNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 435 ~l~~~Gv~v~~~~~~-----------~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.|+++||++.||..| ++++|++ ++-+++.|+..+++|.+.+++
T Consensus 358 ~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 358 RLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred HHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHHH
Confidence 999999999998432 4689999 889999999999999887764
No 272
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.3e-15 Score=136.42 Aligned_cols=296 Identities=18% Similarity=0.214 Sum_probs=183.3
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCC
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g 218 (480)
+.+--.++...+++--|-..+.+.+..+..|.+++.|+.... +|+++|+..-++|--++. .....+
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~-PGkeKIl~cPPtysMY~v-------------~A~iNd 132 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCD-PGKEKILDCPPTYSMYVV-------------DAAIND 132 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheec-CCccceeecCCcceeEEE-------------EeecCC
Confidence 333344556666666666678899999999999999987654 578999999999843222 222224
Q ss_pred eeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc
Q 011669 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA 298 (480)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t 298 (480)
+..+.+|.. ..|+-+ .+.+...++. ...++++++....+++|... +.+.+.+|.+.-+ ++++++||+|-
T Consensus 133 ~eVvkvpl~--pdF~ln----vdai~evl~~--ds~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYi 201 (375)
T KOG0633|consen 133 AEVVKVPLN--PDFSLN----VDAIAEVLEL--DSKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYI 201 (375)
T ss_pred ceEEEecCC--CCcccc----HHHHHHHHhc--cccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeE
Confidence 444444322 134434 4455555553 23678888777777777765 4444555544333 79999999999
Q ss_pred CccccCCCcccccccCCCccee---eeccccc-cCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh--h
Q 011669 299 GFARTGSHFWGFEAHGVVPDIV---TMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI--Q 372 (480)
Q Consensus 299 gfgr~G~~~~~~~~~~~~pDiv---t~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i--~ 372 (480)
.|.-.++ ...+..-.|+++ |+||++| +|+|+|+...+.++++.+.... ..|+.+..+..+|+++|.-- +
T Consensus 202 dFsg~~S---~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K--aPYNiS~~~s~~AL~Als~~n~k 276 (375)
T KOG0633|consen 202 DFSGVES---RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK--APYNISVAGSVAALAALSDSNGK 276 (375)
T ss_pred eeccccc---cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc--CCccccchhHHHHHHhcCcccch
Confidence 8843332 123334467766 6899999 8999999999999988876554 45555666777777777521 1
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEec--cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcC
Q 011669 373 K-DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG--RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY 449 (480)
Q Consensus 373 ~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~ 449 (480)
. +...+-+.+.+.++-..|. ..+...+..| ...|+.+++.... .........+.+-.+||.++--+..
T Consensus 277 kme~~rdaiv~er~RL~keLt----~v~~~~~~~gg~daNFiLi~v~~~~-----n~~akkly~q~at~~gVvVRfrgse 347 (375)
T KOG0633|consen 277 KMEDVRDAIVRERERLFKELT----EVPFLNDYPGGSDANFILIEVTGGD-----NGMAKKLYKQDATKMGVVVRFRGSE 347 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhh----cCccccCCCCcccccEEEEEEcCCC-----cHHHHHHHHHHHHhcceEEEEcCCc
Confidence 1 2222222222233333333 2344443222 2456666664321 1112233455566889999764432
Q ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 450 ---GNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 450 ---~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.+++||+ ..|+|+.+.+++.|+++
T Consensus 348 ~~c~G~lRit---vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 348 EGCKGYLRIT---VGTPEENTVLMKCLKQF 374 (375)
T ss_pred cccceeEEEE---cCCcccchHHHHHHHhh
Confidence 3689999 66899999999988875
No 273
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.69 E-value=4.9e-15 Score=149.85 Aligned_cols=237 Identities=16% Similarity=0.108 Sum_probs=155.6
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
.++|.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.|++..++|.+...........
T Consensus 45 Y~R~~~p~~~~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all--~~GD~Vl~~~p~y~~~~~~~~~~~~~------- 113 (382)
T TIGR02080 45 YSRSGNPTRDLLQQALAELEGG--AGAVVTNTGMSAIHLVTTALL--GPDDLLVAPHDCYGGTYRLLNALAKK------- 113 (382)
T ss_pred ccCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHc--CCCCEEEEcCCCcHHHHHHHHHHHhh-------
Confidence 4577889999999999999863 578999999999999998653 36788999999996533221111110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
.++.....+. .| .++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|
T Consensus 114 --~~~~v~~~d~-------~d----~~~l~~ai~----~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD 172 (382)
T TIGR02080 114 --GCFRVLFVDQ-------GD----EQALRAALA----QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVD 172 (382)
T ss_pred --cCeEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEE
Confidence 1222211110 12 466777774 25788999988889998876 899999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc--Ccccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|..+-.. .. . ....|++ +++|.++| +++.|++++ ++++.+.+...........+|+.+..++..|+
T Consensus 173 ~a~~~~~~~--~p--l---~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 173 NTFLSPALQ--NP--L---ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred CCCcccccC--Cc--h---hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence 999633111 11 1 1224555 67899974 578998876 57777766543334455677888777766665
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
.+.. ..++..++...+.+.|+ .+|.+.. ..|.|.|+.|++.
T Consensus 246 tl~~--R~~~~~~na~~~a~~L~----~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 246 TLVA--RMRLQQRNAQAIVEYLQ----TQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred hHHH--HHHHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 4322 13334444444444444 3443321 2466888888884
No 274
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.69 E-value=3.5e-15 Score=151.51 Aligned_cols=288 Identities=17% Similarity=0.158 Sum_probs=170.2
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
...+.++...+++++|+++++. +.+++++||++|+..++.... .+++.||+..+.|.+........ .
T Consensus 55 y~r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~--~~Gd~Vi~~~~~y~~t~~~~~~~---------~ 121 (390)
T PRK08133 55 YSRFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALL--QAGDHVVSSRSLFGSTVSLFEKI---------F 121 (390)
T ss_pred eECCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEccCcchhHHHHHHHH---------H
Confidence 3456788899999999999864 468899999999999987653 36778888777664432211100 0
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .+++++.++ +++++|++|.++++.|.+.+ +++|.++|++||+++|+|
T Consensus 122 ~~~G~~v~~vd~-------~d----~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD 182 (390)
T PRK08133 122 ARFGIETTFVDL-------TD----LDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVD 182 (390)
T ss_pred HHcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEE
Confidence 112333332221 12 466777774 36889999988888998876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
+++... ... .. . ..+ .|++ +++|.+++ |.++ |++++++++++.+...........++..+..++..++.
T Consensus 183 ~t~~~~-~~~-~p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~t 255 (390)
T PRK08133 183 NCFCTP-ALQ-QP--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLET 255 (390)
T ss_pred CCCccc-ccC-Cc--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccch
Confidence 998522 111 11 1 123 4555 57799985 7887 56777877766554322222233456655554444432
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEEecCCCcCCCCHHHHHHH
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFVTDRQLKTPAKAETLYI 432 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~ 432 (480)
+. ...++..++...+.+.|++ ++.+. ...|.|.|+.|++..+ ......+
T Consensus 256 l~--~R~~~~~~~a~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~-------~~~~~~f 322 (390)
T PRK08133 256 LS--LRMEAHSANALALAEWLEA----HPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-------REAAWRV 322 (390)
T ss_pred HH--HHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC-------HHHHHHH
Confidence 21 1223333344444444443 33221 1346688888888421 1223445
Q ss_pred HHHHH--HcCceee--------cc---------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 433 MDKMK--EMGVLVG--------KG---------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 433 ~~~l~--~~Gv~v~--------~~---------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+.|+ ..++-++ |. |...+.|||+..+ |+.+.+++-|+++|+
T Consensus 323 ~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 323 IDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred HHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 44443 1121111 10 1123579998554 466777777777764
No 275
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=5e-15 Score=150.41 Aligned_cols=294 Identities=19% Similarity=0.137 Sum_probs=172.7
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...++.++...+|+++++++.+ .+.+++++||++|+..++.... .+++.||+.++.|.+.....-...
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~--~~GD~Vl~~~~~y~~~~~~~~~~~------- 125 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEG--GRHALLQPSGLAAISLVYFGLV--KAGDDVLIPDNAYGPNRDHGEWLA------- 125 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHh--CCCCEEEEecCCcccHHHHHHHHH-------
Confidence 34467788999999999999985 4689999999999999998663 367899999999965432110000
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
...|+....++. .+ .+++++.++ +++++|++|.+.|+.|.+.. +++|.++|+++|+++|
T Consensus 126 --~~~Gi~v~~vd~-------~~----~~~l~~~i~----~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~li 184 (394)
T PRK07050 126 --RDFGITVRFYDP-------LI----GAGIADLIQ----PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTA 184 (394)
T ss_pred --HhcCeEEEEECC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEE
Confidence 012343333221 11 246777664 36788999987777765544 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eeccccccC--cccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNG--IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G--~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
+|++|.. +.. .... ..| .|++ +++|.+++| .+.|++++ ++++++.+.........+.+|..+..++..
T Consensus 185 vD~a~a~-~~~---~~~l-~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 185 IDNTYSA-GLA---FKPF-EHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred EECCccc-ccc---cCHH-HcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 9999862 111 1111 123 4655 678999854 57887776 577777665432222334556555444333
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEecCCCcCCCCHHHH
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFVTDRQLKTPAKAET 429 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~~~~~~~~~~~~~~ 429 (480)
|+.+. ...++..+....+.+.|++ ++.+.. ..+.|.++.+++..+. .....
T Consensus 258 l~tl~--~Rl~~~~~~a~~la~~L~~----~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~ 326 (394)
T PRK07050 258 LPSLQ--VRLAAHDRSALEVAEWLKA----RPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY-----SPAQV 326 (394)
T ss_pred CCcHH--HHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC-----CHHHH
Confidence 32221 1223333333344444433 332221 2245666667764211 12345
Q ss_pred HHHHHHHHHcCceeeccCc-------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 430 LYIMDKMKEMGVLVGKGGF-------------------YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 430 ~~~~~~l~~~Gv~v~~~~~-------------------~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.++.+.|...++.+.-|+. .++.|||+..+...++-++.+..+|+++
T Consensus 327 ~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 327 DAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred HHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 6677777665544332221 1257899976654444444444444443
No 276
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=8.8e-15 Score=148.13 Aligned_cols=238 Identities=15% Similarity=0.095 Sum_probs=154.9
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
..+++.++...+|+++|+++.+. +.+++++||++|+..++.... .+++.|++.++.|++...........
T Consensus 45 ~Y~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~--~~GD~Vl~~~~~y~~~~~~~~~~~~~------ 114 (386)
T PRK08045 45 DYSRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFL--KPGDLLVAPHDCYGGSYRLFDSLAKR------ 114 (386)
T ss_pred eeeCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCCcHHHHHHHHHHHhh------
Confidence 34678889999999999999864 468999999999999987543 36788999999997633222111110
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
.++....++. .| .+++++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+
T Consensus 115 ---~gi~v~~vd~-------~d----~e~l~~~l~----~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~viv 172 (386)
T PRK08045 115 ---GCYRVLFVDQ-------GD----EQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVV 172 (386)
T ss_pred ---CCeEEEEeCC-------CC----HHHHHHhcc----cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEE
Confidence 1222111110 12 466777664 36788999999999998876 89999999999999999
Q ss_pred cccccCccccCCCcccccccCCCccee--eecccccc--Ccccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
||+|..... . .. .....|++ +++|.++| +...|++++ ++++.+.+.......+...+|+.+..++..|
T Consensus 173 Deay~~~~~-~-~p-----l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl 245 (386)
T PRK08045 173 DNTFLSPAL-Q-NP-----LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_pred ECCCCcccc-C-Cc-----hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 999964311 1 11 12234655 67899984 467888876 5777766653333344557788887777766
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
+.+. -..++..+....+.+.|+ .+|.+.. ..|.|.|+.|++.
T Consensus 246 ~tl~--~R~~~~~~na~~la~~L~----~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 246 RTLV--PRMELAQRNAQAIVKYLQ----TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred ccHH--HHHHHHHHHHHHHHHHHH----cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 5432 123333344444444443 3443322 2467888888884
No 277
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.69 E-value=1.5e-14 Score=146.06 Aligned_cols=310 Identities=14% Similarity=0.125 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++..+++.+.+...+.+ ...+...++++.+++.++ .+.+++++||++|+..+++.+ ...++++||+..++|.+.
T Consensus 11 ~~e~~a~~~~~~~~~~~---~~g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~ 84 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS---GDGPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVST 84 (376)
T ss_pred HHHHHHHHHHHHcCCcc---CCcHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHH
Confidence 56677888777654321 135678899999999874 478999999999999988754 234678999999998765
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....... |...+.++... ..|..| .+++++.++ .++++|+ |++ .+|...+ +
T Consensus 85 ~~~~~~~-------------G~~~v~vd~d~-~~~~~d----~~~le~~i~----~~tk~Ii--p~~-~~G~~~d----~ 135 (376)
T TIGR02379 85 ANAFVLR-------------GAKIVFVDIRP-DTMNID----ETLIESAIT----HRTKAIV--PVH-YAGVACD----M 135 (376)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCCC----HHHHHHhcC----cCceEEE--EeC-CCCCccC----H
Confidence 4433322 22222222111 112223 567777764 2567776 333 3455554 8
Q ss_pred HHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec----cccccCccccccccC-HHHHHhhcCCC-c-
Q 011669 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y- 350 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~-~~~~~~l~~~~-~- 350 (480)
++|.++|++||+++|.|++|+ +|.. +.-...+..-|+.+|| |.++.|.+.|+++.+ +++++.+.... +
T Consensus 136 ~~I~~la~~~~i~vIeDaa~~-~g~~----~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g 210 (376)
T TIGR02379 136 DTIMALANKHQLFVIEDAAQG-VMST----YKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKG 210 (376)
T ss_pred HHHHHHHHHCCCEEEEECccc-cCCc----cCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhC
Confidence 999999999999999999997 4321 1111224445788888 999988788988776 67777665321 1
Q ss_pred -------------------cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHH----hcCce-eeEec
Q 011669 351 -------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGII-GDVRG 406 (480)
Q Consensus 351 -------------------~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~-~~v~g 406 (480)
+..+-.+.+..+.+++.|+.++ ++.++-++..++..+.|..+.. ..+.+ .....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~--~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~ 288 (376)
T TIGR02379 211 TNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD--RINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQH 288 (376)
T ss_pred CCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCee
Confidence 1122234566666667676543 3455555566666666655421 11110 01110
Q ss_pred cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC----------cC--------------CCEEEEeCCCCCC
Q 011669 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG----------FY--------------GNVFRITPPLCFT 462 (480)
Q Consensus 407 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------~~--------------~~~iRi~p~~~~t 462 (480)
.-.++++.+.. . ...+++.+.|.++||.+...- .+ .+.+.+=.....|
T Consensus 289 ~~~~~~i~~~~-~-------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~ 360 (376)
T TIGR02379 289 NAHMFYIKLKD-E-------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLS 360 (376)
T ss_pred eeEEEEEEECC-c-------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCC
Confidence 00122333321 0 124678899999999876311 00 1123332223479
Q ss_pred HHHHHHHHHHHHHHH
Q 011669 463 KEDADYLVDVMDYSL 477 (480)
Q Consensus 463 ~~~id~~l~~l~~~l 477 (480)
++|++..++.|++++
T Consensus 361 ~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 361 KEDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 278
>PRK05968 hypothetical protein; Provisional
Probab=99.68 E-value=5.2e-15 Score=150.22 Aligned_cols=288 Identities=17% Similarity=0.093 Sum_probs=174.4
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|.++++++.+. +..++++||+.|+..++.... .++++||+..+.|++........ .
T Consensus 57 Y~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~al~al~--~~Gd~Vl~~~~~y~~t~~~~~~~---------~ 123 (389)
T PRK05968 57 YSRGDNPTVRAFEEMLAKLEGA--EDARGFASGMAAISSTVLSFV--EPGDRIVAVRHVYPDAFRLFETI---------L 123 (389)
T ss_pred ccCCCChhHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEeCCCchHHHHHHHHH---------H
Confidence 4566788899999999999865 345677999999999887543 36788999998887632111100 0
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .+++++.+. ++++|++|.+.|..+.+. .+++|.++|++||+++|+|
T Consensus 124 ~~~G~~v~~vd~-------~d----~~~l~~~i~-----~tklV~ie~pt~~~~~~~----dl~~i~~la~~~gi~vivD 183 (389)
T PRK05968 124 KRMGVEVDYVDG-------RD----EEAVAKALP-----GAKLLYLESPTSWVFELQ----DVAALAALAKRHGVVTMID 183 (389)
T ss_pred HHcCceEEEeCC-------CC----HHHHHHhcc-----cCCEEEEECCCCCCCcHH----HHHHHHHHHHHcCCEEEEE
Confidence 011333222211 12 456766652 467888887666555444 4999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccCHHHHHhhcCCCc-cccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTPEIAEVLTRRNY-FNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~~~~~~~l~~~~~-~~t~~~~~~~~aaa~a~L~ 369 (480)
++|.... .. .. .. +|. |++ +++|.+++ | ...|+++.++++++.+..... ......+++.++.++..|+
T Consensus 184 ~a~a~~~-~~-~p--~~-~g~--Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~ 256 (389)
T PRK05968 184 NSWASPV-FQ-RP--IT-LGV--DLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLR 256 (389)
T ss_pred CCCcchh-cc-Cc--hh-cCC--cEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccC
Confidence 9986331 11 11 11 233 555 57799985 3 677888889988776653211 1113356777777766666
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe-------------ccceeEEEEEecCCCcCCCCHHHHHHHHHHH
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR-------------GRGFLLGVEFVTDRQLKTPAKAETLYIMDKM 436 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~-------------g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l 436 (480)
.+ +...++-.+...++.+.|++ ++.+..+. +.|.++.|++.. .....++.+.|
T Consensus 257 tl--~~r~~~~~~~a~~la~~L~~----~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--------~~~~~~f~~~L 322 (389)
T PRK05968 257 TL--PLRMKAHEASALEIARRLKA----HPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--------GIDVRAFADAL 322 (389)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHh----CCCccEEECCCCCCChHHhCCCCceEEEEEECC--------HHHHHHHHHhC
Confidence 44 22333344445555555544 44443332 456677777731 12356677777
Q ss_pred HHcCceeeccCc-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 437 KEMGVLVGKGGF-------------------------YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 437 ~~~Gv~v~~~~~-------------------------~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
...++.+.-|+. ..+.+|+++.+..+++-++.+-.+|+++
T Consensus 323 ~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 323 KLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred CccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 665544332211 1357999988766555555555555443
No 279
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.68 E-value=5.4e-15 Score=150.51 Aligned_cols=237 Identities=18% Similarity=0.147 Sum_probs=151.9
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..+|.++...+|.++|+++.+. +.+++++||+.|+..++.... .++++||+....| |.+....... .
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~--~~al~~~sG~~Ai~~~l~all--~~Gd~Vl~~~~~~-~~t~~~~~~~--------~ 130 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGA--EACFATASGMSAVFTALGALL--GAGDRLVAARSLF-GSCFVVCNEI--------L 130 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHHHHh--CCCCEEEEccCCc-chHHHHHHHH--------H
Confidence 4567889999999999999864 468899999999999887653 3677888776554 3332211100 0
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .++++++++ .++++|++|.+.|++|.+.. +++|.++|+++|+++|+|
T Consensus 131 ~~~G~~v~~vd~-------~d----~~~l~~ai~----~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD 191 (403)
T PRK07810 131 PRWGVETVFVDG-------ED----LSQWEEALS----VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLD 191 (403)
T ss_pred HHcCcEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 012333332221 12 567777775 36789999999999998876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-Cccc-cccccCHHHHH-hhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVTTPEIAE-VLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~~~~~~~-~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|.. +... . .. ..| .|++ +++|.+++ |.++ |+++++++.+. .+...........+|+.++.++..|+
T Consensus 192 ~a~a~-~~~~-~--~~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 192 NVFAT-PLLQ-R--GL-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred CCCCc-cccC-C--hh-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 99862 1111 1 11 123 4666 56799986 7777 77878877554 33321112223467888888777776
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE------------------eccceeEEEEEe
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------------RGRGFLLGVEFV 416 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~ 416 (480)
.+. ...++..+...++.+.|++ +|.+..| .|.|.++.+++.
T Consensus 265 tl~--~R~~~~~~~a~~~a~~L~~----~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 265 TLA--LRVRHSNASALRIAEFLEG----HPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred cHH--HHHHHHHHHHHHHHHHHhc----CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 542 2344444444455444443 3433332 267888888884
No 280
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.68 E-value=9.8e-15 Score=148.23 Aligned_cols=296 Identities=17% Similarity=0.116 Sum_probs=179.9
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+..++|.++...+|+++|+++.+. +.+++++||+.|+..++.... .+++.||+..+.|.+.........
T Consensus 51 ~~y~r~~~p~~~~le~~lA~l~g~--~~av~~~sG~~Ai~~~l~al~--~~Gd~Vi~~~~~y~~t~~~~~~~~------- 119 (391)
T TIGR01328 51 YIYSRLGNPTVSNLEGRIAFLEGT--EAAVATSSGMGAIAATLLTIL--KAGDHLISDECLYGCTFALLEHAL------- 119 (391)
T ss_pred CceeCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEecCcchHHHHHHHHHH-------
Confidence 445667889999999999999964 457899999999998887553 367788888777643222111110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
...|+....++. +| .+++++.++ +++++|++|.++++.|.+.+ +++|.++|+++|+++|
T Consensus 120 --~~~G~~~~~vd~-------~d----~e~l~~~i~----~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~li 178 (391)
T TIGR01328 120 --TKFGIQVDFINM-------AI----PEEVKAHIK----DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVI 178 (391)
T ss_pred --hcCCeEEEEECC-------CC----HHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 112433332221 12 466777664 36789999988888888776 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eecccccc-Ccc-ccccccCHHHHHhhcCCC--ccccCCCcHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIP-LGAVVTTPEIAEVLTRRN--YFNTFGGNPVCTAAGHA 366 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~p-ig~v~~~~~~~~~l~~~~--~~~t~~~~~~~~aaa~a 366 (480)
+||+|.. +..+ .. .+...|++ +++|.+++ |.+ .|++++++++++.+.... .......+|..++.++.
T Consensus 179 vD~a~a~-~~~~-~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~ 251 (391)
T TIGR01328 179 VDNTFAT-PMLT-NP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILR 251 (391)
T ss_pred EECCCch-hccC-Cc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHh
Confidence 9999862 2222 11 12235555 67799985 665 577888888887665321 11123346666666666
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHhHH----hcCce----------eeEeccceeEEEEEecCCCcCCCCHHHHHHH
Q 011669 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFVTDRQLKTPAKAETLYI 432 (480)
Q Consensus 367 ~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~ 432 (480)
.|+.+ +...++..++..++.+.|++... .||.. ...++.|.++.|++..+ .....++
T Consensus 252 ~L~tl--~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-------~~~~~~f 322 (391)
T TIGR01328 252 GLKTL--NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG-------FAGAKKL 322 (391)
T ss_pred CcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC-------HHHHHHH
Confidence 56533 22345555666666666654310 01111 11346677888887421 1223444
Q ss_pred HHHHHH--cCceee--------cc---------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 433 MDKMKE--MGVLVG--------KG---------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 433 ~~~l~~--~Gv~v~--------~~---------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
.+.|.= .+.-.+ |. |...+.|||+..+ ||.+.+++-|+++|+++
T Consensus 323 ~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 323 LNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDAL 391 (391)
T ss_pred HHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhhC
Confidence 444431 111111 00 0113578998554 56777888888887654
No 281
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=1.1e-14 Score=147.52 Aligned_cols=314 Identities=15% Similarity=0.054 Sum_probs=185.5
Q ss_pred CHH-HHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCC-CCEEEEeC-CHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 117 HPY-VVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFTN-SGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 117 ~p~-v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~-~~~v~f~~-sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
+|+ |.+|+.+.+....|.... ......+.++.|+++++.. ..+|+|+. |||++++.++.... .+++.+++. .+
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~~~-f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~--~~~~~~vi~-~g 99 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQKP-VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL--GARRVDHLA-WE 99 (378)
T ss_pred ChHHHHHHHHhhhcccCcCCHH-HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--CCCcceEEE-eC
Confidence 577 999988654322243322 2466788899999998753 34677775 99999999997652 222333333 45
Q ss_pred cccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 194 yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
.||......... .+.. ..+..++.+ +... .| +++ ++ .++.|.+..+.+.+|.+.|
T Consensus 100 ~f~~~~~~~~~~---~~g~----~~v~~~~~~--~g~~--~d----~~~----i~-----~~~~V~~~h~~t~tG~~~p- 154 (378)
T PRK03080 100 SFGSKWATDVVK---QLKL----EDPRVLEAD--YGSL--PD----LSA----VD-----FDRDVVFTWNGTTTGVRVP- 154 (378)
T ss_pred HHHHHHHHHHHh---hcCC----CCceEeccC--CCCC--CC----Hhh----cC-----CCCCEEEEecCCccceecc-
Confidence 666543221100 0000 011222211 1111 11 222 22 1334677777788898887
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCCC--
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN-- 349 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~~-- 349 (480)
+++|.+ ++||+++|+|-+|+ +|.. . ++..+ .|++++| |++++...+|+++++++..+.+.+..
T Consensus 155 ---i~~I~~--~~~g~~~vVDa~qs-~G~~---p--idv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~ 221 (378)
T PRK03080 155 ---VARWIG--ADREGLTICDATSA-AFAL---P--LDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPA 221 (378)
T ss_pred ---chhhcc--ccCCCeEEEecccc-cccC---C--CCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCC
Confidence 888888 78999999999997 5422 2 22223 4888776 99987667899999999887665321
Q ss_pred --------------------ccccCCCcH-HHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCcee-e
Q 011669 350 --------------------YFNTFGGNP-VCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIG-D 403 (480)
Q Consensus 350 --------------------~~~t~~~~~-~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~ 403 (480)
...|++.++ .+..+..++|+.+.+. +..++.+++.+++++.|+++.. ..... .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-~~~~~~~ 300 (378)
T PRK03080 222 RPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW-ATPLVAD 300 (378)
T ss_pred CCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC-cccccCC
Confidence 012333333 3444456778877654 3445666666777777665521 11111 1
Q ss_pred Eecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 404 VRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 404 v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
...+ +.++.+.+.. ++......+...+.++|+++..++. ..+.+|+++...+|++||+.++++|++++++
T Consensus 301 ~~~~s~~i~~~~~~~------~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 301 PATRSNTSVTLDFVD------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred ccccCccEEEEEcCC------chHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1111 2344444311 0001123355667777888876542 2468999999999999999999999998764
No 282
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.67 E-value=9e-15 Score=148.84 Aligned_cols=243 Identities=17% Similarity=0.111 Sum_probs=153.1
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+....|.++...+|+++|+++.+. +..+.++||+.|+..++.... .++++||+.++.|.+.........
T Consensus 57 ~~y~r~~~p~~~~Le~~lA~l~G~--~~~~~~~sG~~Ai~~~l~~~l--~~Gd~Vl~~~~~y~~~~~~~~~~~------- 125 (398)
T PRK07504 57 FIYSRYSNPTVDMFEKRMCALEGA--EDARATASGMAAVTAAILCQV--KAGDHVVAARALFGSCRYVVETLL------- 125 (398)
T ss_pred ceeecCCCchHHHHHHHHHHHhCC--CeeeEecCHHHHHHHHHHHHh--CCCCEEEEcCCchhHHHHHHHHHH-------
Confidence 334567788999999999999854 445678899999988776433 367889998888865432211110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
...|+....++. .| .++++++++ +++++|++|.+++++|.+.+ +++|.++|+++|+++|
T Consensus 126 --~~~G~~v~~vd~-------~d----~e~l~~ai~----~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lv 184 (398)
T PRK07504 126 --PRYGIESTLVDG-------LD----LDNWEKAVR----PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLV 184 (398)
T ss_pred --hhcCeEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEE
Confidence 112333332221 12 567777764 36889999999999998876 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eecccccc-Ccccc-ccccCHHHHH-hhcCCCccccCCCcHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLG-AVVTTPEIAE-VLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig-~v~~~~~~~~-~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
+||+|..+ ... .. . .+| .|++ +++|.+++ |.++| +++++++.++ .+...........+|+.++.++..
T Consensus 185 vD~a~a~~-~~~-~~--~-~~g--aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~ 257 (398)
T PRK07504 185 VDNVFATP-LFQ-KP--L-ELG--AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKG 257 (398)
T ss_pred EECCcccc-ccC-Cc--h-hhC--CCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Confidence 99999732 111 11 1 123 4655 56799985 88986 5667766554 233211112234567888888777
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHH----hcCce----------eeEeccceeEEEEEe
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFV 416 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~v~g~g~~~~i~~~ 416 (480)
|+.+. ...++..++..++.+.|++... .||.. ...+|.|.|+.|++.
T Consensus 258 L~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 258 LETLP--VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred cchHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 77553 2344444555556555554210 01111 113466889999984
No 283
>PRK02769 histidine decarboxylase; Provisional
Probab=99.67 E-value=8.7e-14 Score=140.19 Aligned_cols=287 Identities=19% Similarity=0.168 Sum_probs=181.6
Q ss_pred hHHHHHHHHHHHhCCCCCCE--EEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCC
Q 011669 141 HAIADFAEALASKMPGNLKV--VFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~--v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g 218 (480)
....+..+.++++++.+.++ .+||+||||||..|+..+|...+++.|++ ...-|.....+....+..
T Consensus 65 ~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~-s~~~H~Sv~ka~~~lg~~---------- 133 (380)
T PRK02769 65 DFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYY-SKDTHYSVSKIARLLRIK---------- 133 (380)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEe-CCCceehHHHHHHHcCCC----------
Confidence 45567888888888754343 48999999999999999987655544544 444555444333322211
Q ss_pred eeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC---CEEEEcc
Q 011669 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG---GLCIADE 295 (480)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g---illI~DE 295 (480)
...++... .+. -| .++|++.++.. ...+.+|++...+++.|.+.| +++|.++|++|| +++++|-
T Consensus 134 ~~~V~~~~--~g~--id----~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDa 200 (380)
T PRK02769 134 SRVITSLP--NGE--ID----YDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADA 200 (380)
T ss_pred CceeccCC--CCc--Cc----HHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEe
Confidence 11122111 111 13 67888888753 335888999999999999988 999999999998 6999999
Q ss_pred cccCcccc---CCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCCCc-----cccCCC--cHHHHHH
Q 011669 296 VQAGFART---GSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNY-----FNTFGG--NPVCTAA 363 (480)
Q Consensus 296 v~tgfgr~---G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~-----~~t~~~--~~~~~aa 363 (480)
+|.|+-.. ....+.+ .. ..|.++++ |.+++..++|.++.+++..+.+..... -.|+.| |..+.++
T Consensus 201 A~gg~~~p~~~~~~~~d~--~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~ 277 (380)
T PRK02769 201 ALSGMILPFVNNPPPFSF--AD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALL 277 (380)
T ss_pred cccceeecccCccccCCc--cC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHH
Confidence 99874211 0001211 12 57888887 877767899999999887665532111 123333 3456677
Q ss_pred HHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcC
Q 011669 364 GHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMG 440 (480)
Q Consensus 364 a~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G 440 (480)
..++|+.+..++ ..++..++.+++.++|++. +...-.....+. +.|.. |. ..+. +|
T Consensus 278 lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~~~~--v~f~~------~~----~~~~-----~~ 336 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPNSIT--VVFPC------PS----ERIW-----KK 336 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCceE--EEEcC------CC----HHHH-----hC
Confidence 778888776654 4566666777777777653 221112222222 23321 21 1121 56
Q ss_pred ceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 441 VLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 441 v~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
..+.+.. +.+|+.....++++.||.+++.|.+.+.
T Consensus 337 w~l~~~~---~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 337 WHLATSG---NQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eeEcccC---CEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 6665443 4788888888899999999999987654
No 284
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.66 E-value=8.7e-14 Score=145.04 Aligned_cols=323 Identities=18% Similarity=0.179 Sum_probs=187.5
Q ss_pred CCCHHHHHHHHHHHHhcc-ccc-----cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh------c
Q 011669 115 HCHPYVVDSIVNQIKRIQ-HST-----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------T 182 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~~~-~~~-----~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~------~ 182 (480)
|.+|.+.+++.+...... |.. ..+..+.+.++.+.++++++.+ +..++.++|+.+...++.+++.+ +
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~-~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD-AVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC-ceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 677899998887522111 111 0112245567888888888654 34556677877776665544432 1
Q ss_pred CCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcc
Q 011669 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262 (480)
Q Consensus 183 ~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~ep 262 (480)
++++|++.++.|+.... ..... |+..+.+|.. ..+..| .+++++.++ +++++|++..
T Consensus 160 ~~~~Vlv~~~~hp~~~~-~~~~~------------G~~vv~v~~~--~~~~~D----~e~L~~~i~----~~t~~V~v~~ 216 (481)
T PRK04366 160 KRTEVIVPDSAHGTNPA-SAAMA------------GFKVVEIPSN--EDGLVD----LEALKAAVG----EDTAALMLTN 216 (481)
T ss_pred CCCEEEEcCCccHhHHH-HHHHc------------CCEEEEeecC--CCCCcC----HHHHHhhcc----cCCeEEEEeC
Confidence 33478888876654443 22221 3333333221 112223 567777774 2566666654
Q ss_pred cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeee--ccccc-----cCcccccc
Q 011669 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIG-----NGIPLGAV 335 (480)
Q Consensus 263 i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~--sK~~g-----~G~pig~v 335 (480)
.+ .+|.+ ...+++|.++|+++|+++|+|++|. .+..| .. ....+ ..|++++ -|.++ ||..+|++
T Consensus 217 Pn-~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g-~~-~~~~~--GaD~~~~~~hK~l~~P~g~Ggp~~G~l 287 (481)
T PRK04366 217 PN-TLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILG-KA-RPGDM--GFDVVHLNLHKTFSTPHGGGGPGSGPV 287 (481)
T ss_pred CC-Ccccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhcc-cC-Ccccc--CCCEEEEechhhcCCCCCCCCCCeeee
Confidence 44 56654 1239999999999999999999985 33233 11 11222 3588765 39887 33457788
Q ss_pred ccCHHHHHhhcCCCc-------------------cccCCCcHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHH
Q 011669 336 VTTPEIAEVLTRRNY-------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTA 393 (480)
Q Consensus 336 ~~~~~~~~~l~~~~~-------------------~~t~~~~~~~~aaa~a~L~~i~~~~~~---~~~~~~~~~l~~~L~~ 393 (480)
.+++++.+.+..... .-.+.++.+...+++..+..+-.+.+. ++...+.++++++|.+
T Consensus 288 ~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 288 GVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred eehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 888887776632110 011223445555555556655555443 4556678888888887
Q ss_pred hHHhcCceeeEeccc-eeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---CCCEEEEeCCCCCCHHHHHHH
Q 011669 394 LKDKYGIIGDVRGRG-FLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---YGNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 394 l~~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~~~id~~ 469 (480)
+ +.... .+.. ....+.+..-.. + ......+.+.|.++|+.+..... ..+.+|+++...+|++|||.+
T Consensus 368 ~---~~~~~--~~~~~~~~~~~~~~~~~---~-g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l 438 (481)
T PRK04366 368 I---YDLPY--DRPCMHEFVLSGKKLKE---T-GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAF 438 (481)
T ss_pred h---CcccC--CCCeeEEEEEECccccc---c-CCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHH
Confidence 6 22221 1110 011122110000 0 11256799999999998763211 146899999999999999999
Q ss_pred HHHHHHHHhh
Q 011669 470 VDVMDYSLSK 479 (480)
Q Consensus 470 l~~l~~~l~~ 479 (480)
++.|+++.++
T Consensus 439 ~~~l~~i~~~ 448 (481)
T PRK04366 439 IAAMKQIAEE 448 (481)
T ss_pred HHHHHHHHHH
Confidence 9999988654
No 285
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.66 E-value=2.3e-14 Score=143.91 Aligned_cols=235 Identities=17% Similarity=0.116 Sum_probs=151.3
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...++.++...+|+++|+++.+ .+.++.++||++|+.+++.+ . .++++||+..+.|++.... +....
T Consensus 47 ~Y~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~~-l--~~GD~VI~~~~~yg~~~~~-~~~~~------- 113 (364)
T PRK07269 47 DYTRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFSV-F--PVGSKVVAVRDLYGGSFRW-FNQQE------- 113 (364)
T ss_pred ceeCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHH-h--CCCCEEEEecCCcCchHHH-HHHHH-------
Confidence 3466788999999999999984 46899999999999999853 2 3678899988888543321 11100
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
+..++... |..| .+++++.++ +++++|++|.+.|++|.+.. +++|.++|+++|+++|+
T Consensus 114 -~~~~~~~~---------~~~d----~~~l~~~i~----~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvv 171 (364)
T PRK07269 114 -KEGRFHFT---------YANT----EEELIAAIE----EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIV 171 (364)
T ss_pred -hcCcEEEE---------ecCC----HHHHHHhcC----cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEE
Confidence 00112111 1123 467777774 36789999988888887775 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceee--ecccccc-C-cccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~-G-~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
||++.. + .+ ....+...|+++ ++|.++| | .=.|+|++ ++++.+.+...........+|+.++.++..|
T Consensus 172 D~t~~~----~--~~-~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 172 DNTFYS----P--IY-QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred ECCCcc----c--cc-CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 999641 1 11 122344567775 5699985 3 33467776 4667766643221122445788887777766
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE--eccceeEEEEEe
Q 011669 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV--RGRGFLLGVEFV 416 (480)
Q Consensus 369 ~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v--~g~g~~~~i~~~ 416 (480)
+.+ +...++.+++..++.+. .+.+|.+..+ ++.|.++.|++.
T Consensus 245 ~tL--~~r~~~~~~na~~~a~~----L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 245 KTL--SLRMERSTANAQEVVAF----LKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred CcH--HHHHHHHHHHHHHHHHH----HHhCCCccEEeCCCcCcEEEEEEC
Confidence 643 22333344444444444 4456654433 577888888873
No 286
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.65 E-value=4.8e-14 Score=143.61 Aligned_cols=237 Identities=19% Similarity=0.121 Sum_probs=152.8
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|+++|+++.+. +..++++||++|+..++.... .+++.|++..+.|++.........
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g~--~~~v~~~sG~~Ai~~~l~all--~pGD~Vvv~~p~Y~~t~~~~~~~~--------- 120 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEGG--AGGVITATGMGAINLVLNALL--QPGDTLVVPHDAYGGSWRLFNALA--------- 120 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhCC--CceEEEcCHHHHHHHHHHHHh--CCCCEEEEccCCchHHHHHHHHHH---------
Confidence 4567788889999999998864 345688889999998887653 367889999999976322111110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .+++++.++ +++++|+++..+|++|.+.. +++|.++|++||+++|+|
T Consensus 121 ~~~g~~v~~v~~-------~d----~~~l~~~i~----~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD 181 (405)
T PRK08776 121 KKGHFALITADL-------TD----PRSLADALA----QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVD 181 (405)
T ss_pred HhcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEE
Confidence 001333332221 12 466777764 26788888888888888755 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc--Ccccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|..-... .. .+ ...|++ +.+|.+++ +...|++++ ++++.+.+........+..+|+.+.+.+..++
T Consensus 182 ~a~a~~~~~--~p--l~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~ 254 (405)
T PRK08776 182 NTFLSPALQ--KP--LE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLR 254 (405)
T ss_pred CCCcccccC--Cc--cc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC
Confidence 999632111 11 11 234666 56699984 467788876 46777766543222334568888888777666
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEEe
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 416 (480)
.+ +...++..++...+.+.|++ +|.+. ...|.|.|+.|++.
T Consensus 255 tl--~~r~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 255 TL--DARLRVHQENADAIAALLDG----HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 54 22344455555555555443 33322 12467888999884
No 287
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.65 E-value=2.7e-14 Score=146.36 Aligned_cols=166 Identities=19% Similarity=0.202 Sum_probs=119.7
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|+++|+++.+. +.+++++||++|+..+++.+.. ++++||+..+.|+|........ .
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~~~~---------~ 117 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLFKHT---------L 117 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHH---------H
Confidence 4567788899999999999864 5688999999999999986643 5778999999887643221110 0
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. +| .++++++++ +++++|++|.++|++|.+.+ +++|.++|++||+++|+|
T Consensus 118 ~~~G~~v~~v~~-------~d----~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD 178 (418)
T TIGR01326 118 KRLGIEVRFVDP-------DD----PEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVD 178 (418)
T ss_pred HHcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 011333333321 12 567777774 36789999999899998876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-CccccccccCH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTTP 339 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig~v~~~~ 339 (480)
|+|. .+.. .......+|++ +++|.+++ |+++|++++++
T Consensus 179 ~t~~-~~~~------~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 179 NTFA-TPYL------CRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CCCc-hhhc------CCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 9985 2211 11122345766 68899996 89999988864
No 288
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.65 E-value=1.6e-13 Score=140.19 Aligned_cols=331 Identities=15% Similarity=0.078 Sum_probs=196.4
Q ss_pred CCCHHHHHHHHHHHHhc-ccccc-ccCChHHHHHHHHHHHhCCCC-C-CEEEE--eCCHHHHHHHHHHHHHhhc------
Q 011669 115 HCHPYVVDSIVNQIKRI-QHSTV-LYLNHAIADFAEALASKMPGN-L-KVVFF--TNSGTEANELAIMMARLYT------ 182 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~~-~~~~~-~~~~~~~~~l~e~L~~~~~~~-~-~~v~f--~~sGseA~~~Alk~ar~~~------ 182 (480)
..+|++.+++.+.+.+. .+... ........+..+++++.++.+ . +++.| |+||||||..||+.+|...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 45799999998888643 22111 111356678889999998765 2 34555 7999999999998876421
Q ss_pred -C---CceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE
Q 011669 183 -G---CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258 (480)
Q Consensus 183 -~---~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v 258 (480)
+ ....|+....-|-....+....+. .+..++... .. +.-| .++|+++|+. ++.+|
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~----------~v~~i~~d~-~~--~~vd----~~~L~~~i~~----~t~lV 190 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDV----------ELREVPMDP-GR--YVID----PEQVVEAVDE----NTIGV 190 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCc----------eeEEEecCC-Cc--eeeC----HHHHHHHHhh----CCeEE
Confidence 1 122455555555444333222211 222333211 00 0012 6788888863 57789
Q ss_pred EEcccCCCCcceeCCCChHHHHHHHHHHh------CCEEEEcccccCccc---cCCCcccccccCCCcceeeec--cccc
Q 011669 259 LSESIQGVGGIIELAPGYLPAVYKSIKKA------GGLCIADEVQAGFAR---TGSHFWGFEAHGVVPDIVTMA--KGIG 327 (480)
Q Consensus 259 i~epi~~~~G~~~~~~~~l~~l~~l~~~~------gillI~DEv~tgfgr---~G~~~~~~~~~~~~pDivt~s--K~~g 327 (480)
++.-.+++.|.+.| +++|.++|+++ |+++++|-+|.|+-. .+...+.+. ....|.++++ |.+.
T Consensus 191 ~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~ 264 (431)
T TIGR01788 191 VCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGL 264 (431)
T ss_pred EEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccC
Confidence 99999999999998 99999999999 999999999987421 221111122 2246788887 7765
Q ss_pred cCccccccccCHH--HHHhhcCC-------CccccCCCc-H-HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHH
Q 011669 328 NGIPLGAVVTTPE--IAEVLTRR-------NYFNTFGGN-P-VCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 328 ~G~pig~v~~~~~--~~~~l~~~-------~~~~t~~~~-~-~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~ 393 (480)
+...+|+++.+++ +.+.+... ....++.+. + ....+.+..|..+..+ +..++..++.+++.++|++
T Consensus 265 ~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~ 344 (431)
T TIGR01788 265 VYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK 344 (431)
T ss_pred CCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6677898887754 32332210 000122222 2 1223344444444333 4455666677777777766
Q ss_pred hHHhcCceeeEe--ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceee----ccCc-CCCEEEEeCCCCCCHHHH
Q 011669 394 LKDKYGIIGDVR--GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVG----KGGF-YGNVFRITPPLCFTKEDA 466 (480)
Q Consensus 394 l~~~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~-~~~~iRi~p~~~~t~~~i 466 (480)
+ +.+.-+. ....++.|.+..+.. .......+.+.|.++|+.+. |... ...++|++..-.++++.+
T Consensus 345 ~----~~~el~~~~~~~~iV~Fr~~~~~~----~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~ 416 (431)
T TIGR01788 345 L----GPFEIISDGSGIPLVAFKLKDDAD----PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLA 416 (431)
T ss_pred C----CCEEEeeCCCCceEEEEEeCCCCC----CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHH
Confidence 4 3222121 133344455432110 11124668889999998642 2211 124689887667889999
Q ss_pred HHHHHHHHHHHhhC
Q 011669 467 DYLVDVMDYSLSKM 480 (480)
Q Consensus 467 d~~l~~l~~~l~~~ 480 (480)
+.+++.|++++..+
T Consensus 417 ~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 417 ELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988653
No 289
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.64 E-value=6.2e-14 Score=142.97 Aligned_cols=219 Identities=16% Similarity=0.092 Sum_probs=143.8
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
..+.+.++...+|+++|+++.+. +..+.++||+.|+..+++.. ..++++||+..+.| +.+.......
T Consensus 58 ~y~r~~~p~~~~le~~lA~l~g~--~~~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y-~~t~~~~~~~-------- 124 (403)
T PRK07503 58 FYSRISNPTLALLEQRMASLEGG--EAAVALASGMGAITATLWTL--LRPGDEVIVDQTLY-GCTFAFLHHG-------- 124 (403)
T ss_pred eeeCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHH--cCCCCEEEEccCcc-chHHHHHHHH--------
Confidence 34567788899999999999865 34678889999999998754 34677888887766 3332211100
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
....|+....++. .| .+++++.++ +++++|++|.+++++|.+.+ +++|.++|++||+++|+
T Consensus 125 ~~~~G~~v~~vd~-------~d----~~~l~~~i~----~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIv 185 (403)
T PRK07503 125 LGEFGVTVRHVDL-------TD----PAALKAAIS----DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVV 185 (403)
T ss_pred HhhCCEEEEEeCC-------CC----HHHHHHhcC----ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEE
Confidence 0112444333221 12 466777774 26789999988888898876 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccCHHHHHhhcCC--CccccCCCcHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~a~ 367 (480)
|++|... ..+ .. .+...|++ +++|.+++ | .+.|+++.++++++.+... ........+|+.++.++..
T Consensus 186 D~a~a~~-~~~-~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~ 258 (403)
T PRK07503 186 DNTYCTP-YLQ-RP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRG 258 (403)
T ss_pred ECCCccc-ccC-Cc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcC
Confidence 9999632 222 11 12234655 57899996 5 7889999889988877532 2222355678888777777
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHH
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
|+.+. ...++..++...+.+.|++
T Consensus 259 L~tl~--~r~~~~~~na~~~a~~L~~ 282 (403)
T PRK07503 259 LKTLA--LRMDRHCASAQAVAEWLAR 282 (403)
T ss_pred cchHH--HHHHHHHHHHHHHHHHHHh
Confidence 66442 2223333444445454443
No 290
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=8.1e-14 Score=141.30 Aligned_cols=311 Identities=14% Similarity=0.099 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++-.+++.+.+...+. +..+...+|+++++++++. +.+++++||++|+.++++... ..++++||+..++|.+.
T Consensus 14 ~~e~~~~~~~l~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~lal~al~-~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 14 DEELAAVKEVLRSGWI----TTGPKNQALEQAFCQLTGN--QHAIAVSSATAGMHITLMALG-IGPGDEVITPSLTWVST 86 (379)
T ss_pred HHHHHHHHHHHHcCCc----cCCHhHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcC-CCCCCEEEECCCcHHHH
Confidence 5567777777765422 3457789999999999964 568899999999999998652 23678899999998765
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....... |+..+.++... ..|..| .+++++.++ +++++|+ |++. .|...+ +
T Consensus 87 ~~~~~~~-------------G~~~v~vd~~~-~~~~~d----~~~l~~~i~----~~tkav~--~~~~-~G~~~d----~ 137 (379)
T PRK11658 87 LNMIVLL-------------GATPVMVDVDR-DTLMVT----PEAIEAAIT----PRTKAII--PVHY-AGAPAD----L 137 (379)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHhcc----cCCeEEE--EeCC-CCCcCC----H
Confidence 4332221 33333222111 112223 567777775 2566766 3333 555544 8
Q ss_pred HHHHHHHHHhCCEEEEccccc-CccccCCCcccccccCCCcceeeec--cccccCccccccccC-HHHHHhhcCCC-c--
Q 011669 278 PAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y-- 350 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~t-gfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~-~~~~~~l~~~~-~-- 350 (480)
++|.++|++||+++|+|++|+ |....| .. ...++. ++.+|+ |.+.+| +.|+++.+ +++.+.+.... +
T Consensus 138 ~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~~--~g~~g~--~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~ 211 (379)
T PRK11658 138 DAIRAIGERYGIPVIEDAAHAVGTYYKG-RH--IGARGT--AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGL 211 (379)
T ss_pred HHHHHHHHHcCCeEEEECCCccCCeECC-ee--cCCCCC--EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999997 322222 11 112332 667776 666554 56777764 67766554211 0
Q ss_pred ---------------------cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee-eEeccc
Q 011669 351 ---------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG-DVRGRG 408 (480)
Q Consensus 351 ---------------------~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~v~g~g 408 (480)
+..+..+.+..+.++..|+.+ ++..++.+++.+++++.|.++.-. .... ......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~-~~~~~~~~~~~ 288 (379)
T PRK11658 212 GVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQ-PLSLPAWPHQH 288 (379)
T ss_pred CcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCc-cCcCCCCCCce
Confidence 011222344555555555433 345566666666777766654100 0100 000111
Q ss_pred e--eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC----------------c-------CCCEEEEeCCCCCCH
Q 011669 409 F--LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG----------------F-------YGNVFRITPPLCFTK 463 (480)
Q Consensus 409 ~--~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------~-------~~~~iRi~p~~~~t~ 463 (480)
. ++.+.+... ......+.+.+.|.++||-++... . ....+.+-.....|+
T Consensus 289 ~~~~~~~~~~~~-----~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~ 363 (379)
T PRK11658 289 AWHLFIIRVDEE-----RCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTD 363 (379)
T ss_pred eEEEEEEEECCc-----cccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCH
Confidence 1 112222111 001124678899999998765210 0 012333322344789
Q ss_pred HHHHHHHHHHHHHHh
Q 011669 464 EDADYLVDVMDYSLS 478 (480)
Q Consensus 464 ~~id~~l~~l~~~l~ 478 (480)
+|++.+++.|++++.
T Consensus 364 ~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 364 ADVDRVITALQQIAG 378 (379)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 291
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=7.1e-14 Score=141.89 Aligned_cols=237 Identities=19% Similarity=0.089 Sum_probs=148.4
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
...+.++...+|+++|+++.+.. ..+.++||++|+..++.... .++++||+..+.|.+.........
T Consensus 55 Y~r~~~p~~~~Le~~lA~~~g~~--~~i~~~sG~~Ai~~~l~all--~~Gd~Vl~~~~~y~~t~~~~~~~~--------- 121 (388)
T PRK07811 55 YARTGNPTRTALEEQLAALEGGA--YGRAFSSGMAATDCLLRAVL--RPGDHIVIPNDAYGGTFRLIDKVF--------- 121 (388)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC--ceEEeCCHHHHHHHHHHHHh--CCCCEEEEcCCCchHHHHHHHHhC---------
Confidence 34567788999999999998653 34566899999999998664 367889999999865322111110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+.....+. .| .+++++.++ +++++|++|.++|++|.+.. +++|.++|++||+++|+|
T Consensus 122 ~~~gi~~~~~d~-------~d----~e~l~~~i~----~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD 182 (388)
T PRK07811 122 TRWGVEYTPVDL-------SD----LDAVRAAIT----PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVD 182 (388)
T ss_pred cCCCeEEEEeCC-------CC----HHHHHHhcC----cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEE
Confidence 011333222211 12 567777764 36789999988888887765 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|... ..+ .. .+...|++ +++|.+++ | ...|+++++ +++.+.+...........+|..+..++..|+
T Consensus 183 ~a~a~~-~~~-~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~ 255 (388)
T PRK07811 183 NTFASP-YLQ-QP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK 255 (388)
T ss_pred CCCCcc-ccC-Cc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Confidence 998632 222 11 12234655 57799985 3 567888875 6666655432222223345666555555554
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
.+ +...++..++...+.+.|++ ++.+.. ..|.|.|+.|++.
T Consensus 256 tl--~~R~~~~~~na~~la~~L~~----~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 256 TL--AVRMDRHSENAEAVAEFLAG----HPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHh----CCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 32 22334444455555555543 333221 2466888889884
No 292
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=4.6e-14 Score=142.95 Aligned_cols=217 Identities=19% Similarity=0.117 Sum_probs=139.1
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|+++++++.+. +.+++++||++|+..++.... .+++.|++..+.|++.......+.
T Consensus 47 y~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll--~~GD~Vlv~~~~y~~~~~~~~~~~--------- 113 (385)
T PRK08574 47 YSREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLL--KAGDRVVLPMEAYGTTLRLLKSLE--------- 113 (385)
T ss_pred EECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHh--CCCCEEEEcCCCchhHHHHHHHhh---------
Confidence 4566788999999999999964 467788999999999987553 367889999988876443221111
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
..|+...... .| .+++++.++. .++++|++|.++|++|.+.+ +++|.++|+++|+++|+|
T Consensus 114 -~~g~~v~~~~--------~d----~~~l~~~i~~---~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD 173 (385)
T PRK08574 114 -KFGVKVVLAY--------PS----TEDIIEAIKE---GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVD 173 (385)
T ss_pred -ccCcEEEEEC--------CC----HHHHHHhcCc---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEE
Confidence 0122221110 12 4667777752 26789999999999998876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-Cccc-ccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPL-GAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pi-g~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|. .+... . .. .+| .|++ +++|.++| |-.+ |++++ ++++.+.+...........+|+.++.++..|+
T Consensus 174 ~t~a-~~~~~-~--~l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~ 246 (385)
T PRK08574 174 NTFA-TPLLY-R--PL-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK 246 (385)
T ss_pred CCCC-ccccC-C--hh-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 9985 22111 1 11 134 3555 67899985 5443 54554 67777765532222233455777776666665
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHH
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
.+. ...++..++..++.+.|++
T Consensus 247 tL~--~R~~~~~~na~~la~~L~~ 268 (385)
T PRK08574 247 TLE--VRFERQCRNAMAIAEFLSE 268 (385)
T ss_pred cHH--HHHHHHHHHHHHHHHHHHc
Confidence 442 2334444455555555543
No 293
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.63 E-value=9.5e-14 Score=138.78 Aligned_cols=315 Identities=12% Similarity=0.043 Sum_probs=187.2
Q ss_pred CCHHHHHHHHHHHHhcc--ccc----cccCC---hHHHHHHHHHHHhCCC-CCCEEEEe-CCHHHHHHHHHHHHHhhcCC
Q 011669 116 CHPYVVDSIVNQIKRIQ--HST----VLYLN---HAIADFAEALASKMPG-NLKVVFFT-NSGTEANELAIMMARLYTGC 184 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~--~~~----~~~~~---~~~~~l~e~L~~~~~~-~~~~v~f~-~sGseA~~~Alk~ar~~~~~ 184 (480)
.+..|++++.+.+.... +.. ..... ....+..+.|.+++.. ...+|+|+ +|||+|+|+++..... ++
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~--~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA--EG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC--CC
Confidence 35689999988877432 110 01111 4567788888888864 22345555 5699999999986543 56
Q ss_pred ceEEEEcCCcccccccccccccCCCccccccCCCe-eEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEccc
Q 011669 185 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~-~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi 263 (480)
+++++...+..|....-+.... |. ..+..+ ...+|+.. .++++... ..++.+|.+-.+
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~-----------g~~~~~~~~--~~~~~~~~-----~~~~~~~~---~~~~~~v~~th~ 139 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKY-----------GVVNVVASG--KEGNYTKI-----PDPSTWEI---SEDAAYVHYCAN 139 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHh-----------CCcEEEecc--ccCCCCCC-----CCHHhcCC---CCCCCEEEEcCC
Confidence 7777777888776664333221 22 111111 11223221 12222221 135777777777
Q ss_pred CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHH
Q 011669 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEI 341 (480)
Q Consensus 264 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~ 341 (480)
-+++|+..+ ++++.+++++|+|-||+ +|-. ....+.+ |++++| |++| .-.+|.+++++++
T Consensus 140 ETstGv~~~---------~l~~~~~~l~iVDavss-~g~~---~id~~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~ 201 (349)
T TIGR01364 140 ETIHGVEFR---------ELPDVKNAPLVADMSSN-ILSR---PIDVSKF----GLIYAGAQKNIG-PAGLTVVIVRKDL 201 (349)
T ss_pred CCcccEecc---------eecccCCCeEEEEcccc-ccCc---cCCHHHc----cEEEEecccccC-CCceEEEEECHHH
Confidence 777887653 67777899999999997 4322 2222322 466655 9986 3447899999998
Q ss_pred HHhhcCCC-----------ccccC-CCcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 342 AEVLTRRN-----------YFNTF-GGNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 342 ~~~l~~~~-----------~~~t~-~~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
.+.+.+.. ...++ +.|-....+..++|+.+.++ ++.++.+++.+++++.|+++..-+.......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~ 281 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPR 281 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHH
Confidence 87664421 01223 33445556666788888654 3445556666666666666521001101101
Q ss_pred ccc-eeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 406 GRG-FLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 406 g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+. ..+.+.+.. ......+...+.++|+.+.++....+.+|+++...+|++|||.++++|++++++
T Consensus 282 ~rs~~v~sf~~~~--------~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 282 NRSRMNVVFTLGN--------EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HcCCeEEEEecCC--------hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 122 333443311 112355667888999966555322468999999999999999999999998764
No 294
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.63 E-value=6.8e-14 Score=140.50 Aligned_cols=307 Identities=13% Similarity=0.081 Sum_probs=190.1
Q ss_pred CCHHHHHHHHHHHHhc----------cccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHHHHHHHHHHHHHhhcC
Q 011669 116 CHPYVVDSIVNQIKRI----------QHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTG 183 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~----------~~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGseA~~~Alk~ar~~~~ 183 (480)
.+++|++|+.+++.+. .|....+ .+...+..++|+++++. +.+.+++.+||+.|+|+++..... +
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f-~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~--~ 90 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEF-EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG--G 90 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC--C
Confidence 5799999999887432 2222111 25678889999999874 234556668999999999876543 4
Q ss_pred CceEEEEcCCcccccccccccccCCCccccccCCCee-EecCCCCcCCCCCC-ChHHHHHHHHH-HHHccCCCceEEEEE
Q 011669 184 CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH-HALNPDPYRGVFGA-DGEMYAKDVQD-LIDFGTSGHVAGFLS 260 (480)
Q Consensus 184 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~-~~~~p~~~~~~~~~-d~~~~~~~le~-~i~~~~~~~~a~vi~ 260 (480)
+++++....+..|....-+.-.. |.. .+..+.. |+. + ..++++ .++ .++++|.+
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~~-----------g~~~~~~~~~~----~g~~~----~~~~~~~~l~----~~~~~V~~ 147 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKKY-----------GEVNVAASSED----DGFTY----IPPLDEWQLS----DDAAYVHY 147 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHHh-----------CCceEEecccc----cCCCC----CCChhhccCC----CCCCEEEE
Confidence 56777777777776653332221 111 1111100 110 0 112222 343 25678888
Q ss_pred cccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccC
Q 011669 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT 338 (480)
Q Consensus 261 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~ 338 (480)
-.+-+++|...++ +++| ||+++|+|-||+ +|. .....+.+ |++++| |++| ...+|.++++
T Consensus 148 th~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~---~~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s 209 (360)
T PRK05355 148 TSNETIDGTEFHE---LPDT------GDVPLVADMSSD-ILS---RPIDVSKF----GLIYAGAQKNIG-PAGLTIVIVR 209 (360)
T ss_pred ccCCCcceEecCc---cccc------CCCcEEEEcCcc-ccC---ccCCHHHc----cEEEEecccccc-CCceEEEEEC
Confidence 8888888888632 5544 899999999997 442 22222222 466665 9986 3457999999
Q ss_pred HHHHHhhcCC-C----------ccccCC-CcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCcee
Q 011669 339 PEIAEVLTRR-N----------YFNTFG-GNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIG 402 (480)
Q Consensus 339 ~~~~~~l~~~-~----------~~~t~~-~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 402 (480)
+++.+.+.+. . ...+++ .|-....+..++|+.+.++ ++.++.+++.+++++.|+++ +...
T Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~ 285 (360)
T PRK05355 210 EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYR 285 (360)
T ss_pred HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcc
Confidence 9998776552 1 112233 3455566666888888765 45566666677777777665 3221
Q ss_pred e-----EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 403 D-----VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 403 ~-----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
. .+ .+..+.+.+ |.......+...+.++|+.+.++....+.+|+++...+|++|||.+++.|++++
T Consensus 286 ~~~~~~~r-s~~v~sf~~--------~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 286 NPVAPEDR-SRMNVPFTL--------ADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred cCCChhhc-CCcEEEEEc--------CChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 1 11 123334433 222233566678889999985543224689999999999999999999999987
Q ss_pred hh
Q 011669 478 SK 479 (480)
Q Consensus 478 ~~ 479 (480)
+.
T Consensus 357 ~~ 358 (360)
T PRK05355 357 RR 358 (360)
T ss_pred Hh
Confidence 53
No 295
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=9.6e-14 Score=140.26 Aligned_cols=239 Identities=16% Similarity=0.086 Sum_probs=150.8
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+..+++.++...+|.++|+++.+ .+.+++++||++|+..++.... .+++.|++..+.|.+.........
T Consensus 45 ~~Y~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all--~~Gd~Il~~~~~y~~~~~~~~~~~------- 113 (388)
T PRK08861 45 YDYTRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALL--GPDDLIVAPHDCYGGTYRLFNTRA------- 113 (388)
T ss_pred ccccCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHc--CCCCEEEEcCCchHHHHHHHHHHH-------
Confidence 34567789999999999999985 4789999999999999997653 367889998988864322111110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
...|+....++. .| .++++++++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|
T Consensus 114 --~~~gi~v~~vd~-------~d----~e~l~~~i~----~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vI 172 (388)
T PRK08861 114 --NKGDFKVQFVDQ-------SD----AAALDAALA----KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVA 172 (388)
T ss_pred --hcCCeEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEE
Confidence 011333332221 12 466777664 36789999988888998876 8999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCccee--eecccccc--CccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHH
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
+||+|... . . ....+...|++ +++|.++| +...|+++++ +++.+.+...........+|..+...+..
T Consensus 173 vDea~~~~-~-~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rg 245 (388)
T PRK08861 173 VDNTFLTP-V-L-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRG 245 (388)
T ss_pred EECCcccc-c-c-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhc
Confidence 99999631 1 1 11112345666 56699986 3667888775 55666554322222334457666655544
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEEe
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFV 416 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~ 416 (480)
|+.+. -..++..+....+.+.|+ .+|.+. ...|.|.++.|++.
T Consensus 246 l~Tl~--lR~~~~~~~a~~~a~~L~----~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 246 IRTLG--ARMRVHEESAQQILAYLQ----TQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred CCCHH--HHHHHHHHHHHHHHHHHH----hCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 43321 122333344444444444 333322 13467888888884
No 296
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.62 E-value=2.6e-14 Score=144.21 Aligned_cols=289 Identities=16% Similarity=0.120 Sum_probs=175.7
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
.+..++....|+++|+++.+. +.+++++||++|+..++.... .+++.||+.++.|++.....-... .
T Consensus 45 ~r~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all--~~GD~Vl~~~~~y~~t~~~~~~~~---------~ 111 (377)
T TIGR01324 45 GRRGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFV--KAGDHVLMVDSAYEPTRYFCDIVL---------K 111 (377)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhc--CCCCEEEEcCCCcHHHHHHHHHHH---------H
Confidence 345678889999999999864 568899999999999997653 367889999999987533111000 0
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++. .+ .+++++.++ +++++|++|.+.+++|.+.+ +++|.++|++||+++|+||
T Consensus 112 ~~gi~v~~~d~-------~~----~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~ 172 (377)
T TIGR01324 112 RMGVDITYYDP-------LI----GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDN 172 (377)
T ss_pred hcCcEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEEC
Confidence 01222221110 11 145666664 36889999998888887766 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCccee--eecccccc--CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i 371 (480)
+|. .|... . ......|++ +++|.++| +.-.|+++++++.++.+...........+|..+...+..|+.+
T Consensus 173 t~a-~g~~~-~-----pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl 245 (377)
T TIGR01324 173 TWA-AGLLF-K-----PLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTL 245 (377)
T ss_pred CCc-ccccc-C-----ccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhH
Confidence 996 33222 1 112345666 45799985 3667889998887776653222222234566555555555432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEEecCCCcCCCCHHHHHHHH
Q 011669 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFVTDRQLKTPAKAETLYIM 433 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~ 433 (480)
. -..++..+....+.+.|++ +|.+. ...+.|.++.|++... ......++.
T Consensus 246 ~--~R~~~~~~~a~~la~~L~~----~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~------~~~~~~~~~ 313 (377)
T TIGR01324 246 G--VRLKQHQESSLAIAKWLSE----QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL------TQKQVHAFL 313 (377)
T ss_pred H--HHHHHHHHHHHHHHHHHHh----CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC------CHHHHHHHH
Confidence 1 1233334444444444443 23221 1236678888888421 122345566
Q ss_pred HHHHHcCceeeccC---------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 434 DKMKEMGVLVGKGG---------------------FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 434 ~~l~~~Gv~v~~~~---------------------~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+.|+-.++.+.-|+ ..++.|||+..+ |+.+.+++-|+++|+.
T Consensus 314 ~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 314 DHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred HhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 66654333322211 123568988554 4566667777776654
No 297
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=2.5e-14 Score=139.16 Aligned_cols=310 Identities=20% Similarity=0.200 Sum_probs=188.5
Q ss_pred CCCCHHHHHHHHHHHHhccccc-----cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEE
Q 011669 114 GHCHPYVVDSIVNQIKRIQHST-----VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDII 188 (480)
Q Consensus 114 Gh~~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii 188 (480)
|.|++.+.+++.+ +.+.. ..+.+....++.+..+++++.. +.+ ..+-|-..|..-+-. +-++...|
T Consensus 154 g~ca~~~~~~~~k----ygl~~css~~e~G~~~~hkelE~l~A~f~g~e-~a~-vF~mGf~TNs~~~p~---l~~~gsLI 224 (519)
T KOG1357|consen 154 GPCAEASLKSFDK----YGLSRCSSRHEAGTTEEHKELEELVARFLGVE-DAI-VFSMGFATNSMNIPS---LLGKGSLI 224 (519)
T ss_pred CcCChHHHHHHHH----hcccccccchhcccHHHHHHHHHHHHHhcCCc-ceE-EEeccccccccCcce---eecCCcce
Confidence 4566666666544 43321 1355677888988888888643 333 334444444433321 12455566
Q ss_pred EEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH----cc-----CCCceEEEE
Q 011669 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID----FG-----TSGHVAGFL 259 (480)
Q Consensus 189 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~----~~-----~~~~~a~vi 259 (480)
+.+--.|+.......+++.....+.+ || ..+||++|. .. .+-+.-.||
T Consensus 225 iSDelNHaSi~~GaRLSgAtiRVfkH-------------------Nd----m~~LEr~Lrd~I~~gqP~Thrp~kki~ii 281 (519)
T KOG1357|consen 225 ISDELNHASLITGARLSGATTRVFRH-------------------ND----MQGLERLLRDAIVYGQPKTHRPWKKILIC 281 (519)
T ss_pred eeccccchheeccccccCceEEEEec-------------------CC----HHHHHHHHHHHHhcCCCCcCCcchheeee
Confidence 66777787766665555432221111 34 445555553 21 123556899
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccccccCCCc---ce--eeecccccc-Ccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVVP---DI--VTMAKGIGN-GIP 331 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~~~~~~~p---Di--vt~sK~~g~-G~p 331 (480)
+|.+..+.|.+.. |+++.++++||..+|+.||+++. .|++| ....+.+++.| || .+|.|++|+ |
T Consensus 282 vegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG--rgvce~~g~d~~dvDImMGtftKSfga~G-- 353 (519)
T KOG1357|consen 282 VEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG--RGVCEYFGVDPEDVDIMMGTFTKSFGAAG-- 353 (519)
T ss_pred eccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC--cceeeccCCCchhheeecceehhhccccc--
Confidence 9999999999987 99999999999999999999974 34555 22345555543 43 388999994 5
Q ss_pred ccccccCHHHHHhhcCCCccccCC--CcHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHhHHhcCcee
Q 011669 332 LGAVVTTPEIAEVLTRRNYFNTFG--GNPVCTAAGHAVLKVIQK-------DKLQNNAHVVGSYLKERLTALKDKYGIIG 402 (480)
Q Consensus 332 ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aaa~a~L~~i~~-------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 402 (480)
|++.+++++++.+.......+++ .+|+.+...+..++.+.. +...++++++..++|..|+.. +++.
T Consensus 354 -Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~----gfiv 428 (519)
T KOG1357|consen 354 -GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM----GFIV 428 (519)
T ss_pred -ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC----cEEE
Confidence 67999999999887655444433 234444455666777753 234566677777777766654 1111
Q ss_pred eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 403 DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-----YGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 403 ~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-----~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
.-.......-+-+. .+.....+.+.|+++++.+...++ -....|++.+..+++|++|++++.++++
T Consensus 429 yG~~dSpVvplll~--------~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 429 YGNNDSPVVPLLLY--------GPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred ecCCCCCcceeeec--------CcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 00000000000000 111245577788888776654432 1245799999999999999999999875
No 298
>PLN03032 serine decarboxylase; Provisional
Probab=99.62 E-value=5.2e-13 Score=133.70 Aligned_cols=308 Identities=15% Similarity=0.069 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHh-ccccccc-----cCChHHHHHHHHHHHhCCCCCCEE--EEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 118 PYVVDSIVNQIKR-IQHSTVL-----YLNHAIADFAEALASKMPGNLKVV--FFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 118 p~v~~A~~~~~~~-~~~~~~~-----~~~~~~~~l~e~L~~~~~~~~~~v--~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
+.+++++.+.+.+ .+..... .......+..+.+++.++.+.+.+ +||+||||||..|+..+|.+.++ .+++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~-~~vi 115 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPD-GILY 115 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCC-cEEE
Confidence 3456666665542 2221111 124556788889999998765655 99999999999999999875444 3566
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
....-|-...-+....+. ++..++... ++...+++|++.|+.. .+.+.+|++.-.+++.|.
T Consensus 116 ~s~~~H~Sv~kaa~~lg~----------~~~~V~~d~--------~g~id~~~L~~~i~~~-~~~~~lvv~tagtt~tG~ 176 (374)
T PLN03032 116 ASRESHYSVFKAARMYRM----------EAVKVPTLP--------SGEIDYDDLERALAKN-RDKPAILNVNIGTTVKGA 176 (374)
T ss_pred eCCCceeHHHHHHHHcCC----------CCeEeeeCC--------CCcCcHHHHHHHHHHc-CCCCEEEEEEecCcCCcc
Confidence 666667655544433321 222232211 1111267888888743 225678888888889999
Q ss_pred eeCCCChHHHHHHHHHHhC-----CEEEEcccccCcccc--C-CCcccccccCCCcceeeec--cccccCccccccccCH
Q 011669 270 IELAPGYLPAVYKSIKKAG-----GLCIADEVQAGFART--G-SHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTP 339 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~g-----illI~DEv~tgfgr~--G-~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~ 339 (480)
+.| +++|.++|++|| +++++|-+|.|+-.. . ...+.+ ....|.++++ |.++...++|+++.++
T Consensus 177 idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~ 249 (374)
T PLN03032 177 VDD----LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRK 249 (374)
T ss_pred CCC----HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEc
Confidence 988 999999999997 589999999764110 0 001111 1247888877 7666678899999998
Q ss_pred HHHHhhcCCCc-----cccCCCc--HHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHhHHhcCceeeEeccce
Q 011669 340 EIAEVLTRRNY-----FNTFGGN--PVCTAAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409 (480)
Q Consensus 340 ~~~~~l~~~~~-----~~t~~~~--~~~~aaa~a~L~~i~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~ 409 (480)
+..+.+..... -.|+.++ ....+..+++|+.+-.+.+ .++..++.+++.++|++. +.........+
T Consensus 250 ~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~ 325 (374)
T PLN03032 250 KHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSS 325 (374)
T ss_pred hhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCce
Confidence 77765543211 1234333 3556667777777666554 455566677777777663 22222222222
Q ss_pred eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 410 LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 410 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
. +.|..+ .. .. ..+|..+.+. .+.+|+.....++++.+|++++-|++
T Consensus 326 ~--V~f~~~------~~---~~-----~~~~w~l~~~---~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 326 T--VVFERP------MD---EA-----FIKKWQLACE---GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred E--EEEcCC------Cc---Hh-----Hhheeeeccc---CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 2 333221 10 11 2256655543 34788887777889999999998875
No 299
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.62 E-value=2.8e-13 Score=137.21 Aligned_cols=305 Identities=14% Similarity=0.125 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++-.+++.+.+...+.. ...+...++++++++.++ .+++++++||++|+.+++..+. ..+++.||+..++|.+.
T Consensus 11 ~~~~~~~~~~l~~~~~~---g~~~~~~~~e~~la~~~g--~~~~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 11 GTELDYIQQAMSSGKLC---GDGGFTRRCQQWLEQRFG--SAKVLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHHHcCCcc---CCCHHHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHH
Confidence 34466666666553211 124667888899999874 4789999999999999887542 23678899999998765
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....... |...+.++.. ...|..| .+++++.++. ++++|++.. ..|.... +
T Consensus 85 ~~~~~~~-------------G~~~v~~d~d-~~~~~~d----~~~le~~i~~----~tk~i~~~~---~~G~~~~----~ 135 (375)
T PRK11706 85 ANAFVLR-------------GAKIVFVDIR-PDTMNID----ETLIEAAITP----KTRAIVPVH---YAGVACE----M 135 (375)
T ss_pred HHHHHHc-------------CCEEEEEecC-CCcCCcC----HHHHHHhcCC----CCeEEEEeC---CCCCccC----H
Confidence 5443322 2222222211 1112223 5678877752 566666432 3565544 8
Q ss_pred HHHHHHHHHhCCEEEEcccccCccc--cCCCcccccccCCCcceeeec----cccccCccccccccCHHHHHhhcCCC-c
Q 011669 278 PAVYKSIKKAGGLCIADEVQAGFAR--TGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTTPEIAEVLTRRN-Y 350 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~tgfgr--~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~~~~~~~l~~~~-~ 350 (480)
++|.++|++||+++|.|++|+ +|. .| . ..+..-|+.+|| |.++.|.+.++++.++++.+.+.... +
T Consensus 136 ~~i~~la~~~~i~vIeD~a~a-~g~~~~~-~-----~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~ 208 (375)
T PRK11706 136 DTIMALAKKHNLFVVEDAAQG-VMSTYKG-R-----ALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREK 208 (375)
T ss_pred HHHHHHHHHcCCEEEEECccc-cccccCC-e-----eeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHc
Confidence 999999999999999999997 432 12 1 112234778888 99987776667777788776443211 0
Q ss_pred --------------------cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee--eEe---
Q 011669 351 --------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG--DVR--- 405 (480)
Q Consensus 351 --------------------~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~--- 405 (480)
+.++-.+.+..+.+++.|+.+ +...++.+++.+++++.|..+.. .+.+. ...
T Consensus 209 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~ 285 (375)
T PRK11706 209 GTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAE-AGRIELPSIPDDC 285 (375)
T ss_pred CCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCc-CCeeecCCCCCCC
Confidence 112222345555566666543 33445555555666666654421 01111 011
Q ss_pred -ccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-----------------cC-------CCEEEEeCCC-
Q 011669 406 -GRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-----------------FY-------GNVFRITPPL- 459 (480)
Q Consensus 406 -g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------~~-------~~~iRi~p~~- 459 (480)
....++++.+... .....+.+.|.++||.+...- .. .+. ++.|+
T Consensus 286 ~~~~~~~~~~~~~~--------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~--l~lP~~ 355 (375)
T PRK11706 286 KHNAHMFYIKLRDL--------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERL--LRLPLF 355 (375)
T ss_pred ceeeEEEEEEECCc--------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCc--EeccCC
Confidence 1122334444211 125678899999999864210 00 122 34443
Q ss_pred -CCCHHHHHHHHHHHHHHH
Q 011669 460 -CFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 460 -~~t~~~id~~l~~l~~~l 477 (480)
..|++|++..++.|++++
T Consensus 356 ~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 356 YNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 368999999999999865
No 300
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.61 E-value=3.6e-13 Score=148.49 Aligned_cols=348 Identities=14% Similarity=0.104 Sum_probs=203.7
Q ss_pred CEEEeccCCcccccCCCCCHHHHHH-HHHHHHhc---cccc---cccCChHHHHHHHHHHHhCCCCCC--EEEEeCCHHH
Q 011669 99 RRYLDAFGGIATVCCGHCHPYVVDS-IVNQIKRI---QHST---VLYLNHAIADFAEALASKMPGNLK--VVFFTNSGTE 169 (480)
Q Consensus 99 ~~ylD~~~g~~~~~lGh~~p~v~~A-~~~~~~~~---~~~~---~~~~~~~~~~l~e~L~~~~~~~~~--~v~f~~sGse 169 (480)
..|||..+.. ..+|.++++ +.+.+... .|.. .......+.+.+++++++++.+.+ .|+||+++|+
T Consensus 35 ~iYLD~Aatt------~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGAT------LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCC------CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 5899976543 223444444 44444432 1211 111234577899999999986544 5899999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCC--CCCC--ChHHHHHHHHH
Q 011669 170 ANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRG--VFGA--DGEMYAKDVQD 245 (480)
Q Consensus 170 A~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~--~~~~--d~~~~~~~le~ 245 (480)
|+..+..... ..+++.||+ ....|............ .|+.....+..... +.+. +.+...+++++
T Consensus 109 alnlva~~l~-~~~gd~Iv~-t~~eH~svl~~~~~a~~---------~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~ 177 (805)
T PLN02724 109 ALKLVGETFP-WSSESHFCY-TLENHNSVLGIREYALE---------KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQR 177 (805)
T ss_pred HHHHHHHHCC-CCCCCeEEE-eeccccchHHHHHHHHH---------cCCeEEeccchhccccccccccccccchhhhhh
Confidence 9998876542 234566666 45555544433221110 12222221111000 0000 00000134444
Q ss_pred HHH----c--cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh--------CCEEEEcccccCccccCCCccccc
Q 011669 246 LID----F--GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--------GGLCIADEVQAGFARTGSHFWGFE 311 (480)
Q Consensus 246 ~i~----~--~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--------gillI~DEv~tgfgr~G~~~~~~~ 311 (480)
.++ . ...++++.|.+..+.+.+|.+.| ++.+..+++.. ++++++|-+|+ +|.. .++
T Consensus 178 ~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~-----piD 247 (805)
T PLN02724 178 RNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTS-----PPD 247 (805)
T ss_pred hhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCCC-----CCC
Confidence 421 1 01235679999999999999988 77665555432 36899999996 4322 234
Q ss_pred ccCCCcceeeec--cccccCccccccccCHHHHHhhcCCCccc-c---------C--------------CCcHHHHHHHH
Q 011669 312 AHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYFN-T---------F--------------GGNPVCTAAGH 365 (480)
Q Consensus 312 ~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~~~-t---------~--------------~~~~~~~aaa~ 365 (480)
...+.+|++++| |.+|+...+|++++++++.+.+.+...++ + + ..|..+.++..
T Consensus 248 v~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 248 LSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred hhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 445578999888 98875566899999998877666432211 1 1 23456666666
Q ss_pred HHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhc--CceeeE---------eccceeEEEEEecCCCcCCCCHHHHHH
Q 011669 366 AVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKY--GIIGDV---------RGRGFLLGVEFVTDRQLKTPAKAETLY 431 (480)
Q Consensus 366 a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~--~~~~~v---------~g~g~~~~i~~~~~~~~~~~~~~~~~~ 431 (480)
++|+.+.+ +.+.++.+++.+++.+.|.++.... +.+.-. ..++..+.|.+...... ......
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~----~v~~~~ 403 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGS----WVGHRE 403 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCC----EeCHHH
Confidence 77777655 5677888888999999888773111 111111 12455555555432111 011233
Q ss_pred HHHHHHHcCceeeccCc-------------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 432 IMDKMKEMGVLVGKGGF-------------------------------------YGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 432 ~~~~l~~~Gv~v~~~~~-------------------------------------~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+...+.++||.++.|.. ..+.+|+++.+..|.+|||++++.|+
T Consensus 404 v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~ 483 (805)
T PLN02724 404 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFII 483 (805)
T ss_pred HHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHH
Confidence 44445567888876521 02679999999999999999999999
Q ss_pred HHH
Q 011669 475 YSL 477 (480)
Q Consensus 475 ~~l 477 (480)
+.+
T Consensus 484 ~~~ 486 (805)
T PLN02724 484 SSF 486 (805)
T ss_pred HHh
Confidence 865
No 301
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1.9e-13 Score=139.96 Aligned_cols=165 Identities=22% Similarity=0.271 Sum_probs=116.1
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++...+|+++|+++.+. +..++++||++|+..+++.+.. ++++||+..+.|++... .+... .
T Consensus 52 y~r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~-~~~~~--------l 118 (425)
T PRK06084 52 YTRIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYN-LLAHT--------L 118 (425)
T ss_pred ccCCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHH-HHHHh--------c
Confidence 4456778889999999999863 4567899999999999986644 56789999999986332 22110 0
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
+..|+....++. .| .++++++++ +++++|++|++++++|.+.+ +++|.++|++||+++|+|
T Consensus 119 ~~~gi~v~~~d~-------~d----~e~le~ai~----~~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD 179 (425)
T PRK06084 119 PRIGIETRFAAH-------DD----IAALEALID----ERTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVD 179 (425)
T ss_pred ccceeEEEEECC-------CC----HHHHHHHhc----cCCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEE
Confidence 111332222111 12 567888775 26789999999999998876 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-CccccccccC
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTT 338 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig~v~~~ 338 (480)
|+|. .+... .......|++ +++|.++| |.++|.+++.
T Consensus 180 ~a~a-~~~~~------~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 180 NTVA-TPVLC------RPFEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred CCCc-ccccC------ChhhcCCCEEEECchhcccccccceeEEEEe
Confidence 9996 22211 1122346666 67899996 6788876653
No 302
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=2.2e-13 Score=137.58 Aligned_cols=236 Identities=12% Similarity=0.068 Sum_probs=147.4
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
....++...+|+++|+++.++ +.+++++||++|+..++.... .++++||+.++.|.+........ ..
T Consensus 56 ~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all--~~GD~Vvv~~~~Y~~t~~l~~~~---------l~ 122 (394)
T PRK09028 56 GRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFL--KAGDHLLMVDSCYEPTRDLCDKI---------LK 122 (394)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEECCCcHHHHHHHHHh---------hh
Confidence 444567788999999998753 458899999999999987553 36789999999986654321110 01
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++. .+ .+.++++++ +++++|++|.+.|++|.+.+ +++|.++|++||+++|+||
T Consensus 123 ~~Gi~v~~v~~-------~~----~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~ 183 (394)
T PRK09028 123 GFGIETTYYDP-------MI----GEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDN 183 (394)
T ss_pred hcceEEEEECC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEEC
Confidence 12333322211 12 255776664 36889999999999887766 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i 371 (480)
+|.. + - .+.-.....|++ +..|.++| | .-.|+++.++++.+.+...........+|..+...+..|+.+
T Consensus 184 t~a~----p-~--~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL 256 (394)
T PRK09028 184 TWAS----P-I--NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTL 256 (394)
T ss_pred Cccc----c-c--cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcH
Confidence 9962 2 0 122223345766 56799985 3 777888777777665543211112234566655555444332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
. -..++..+....+.+.|++ +|.+.. ..|.|.|+.|++.
T Consensus 257 ~--lR~~~~~~na~~la~~L~~----~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 257 G--VRLAQHEKNALKVANWLAT----RPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred H--HHHHHHHHHHHHHHHHHhc----CCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 1 1233334444444444443 333221 2466888888884
No 303
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.60 E-value=5.3e-13 Score=136.06 Aligned_cols=217 Identities=14% Similarity=0.130 Sum_probs=135.2
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccC-CCcc
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG-VVPD 318 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~-~~pD 318 (480)
.+++++++.. .+..|++-...+.++ ..+ +++|+++|++||+++++|++|+ +|-.|......+... ...|
T Consensus 209 ~d~l~~~~~~----~~plvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D 278 (493)
T PRK13580 209 YDEIAALARE----FKPLILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHAD 278 (493)
T ss_pred HHHHHHHHhh----cCCEEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCc
Confidence 6778888863 334444445544444 445 9999999999999999999996 554431111100001 1457
Q ss_pred ee--eeccccccCccccccccCHHHHHhhcCCCccccCCCc-HHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHH
Q 011669 319 IV--TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGN-PVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 319 iv--t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~-~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~ 392 (480)
++ |++|++.|.. .|++++++++.+.+.... ...++++ +...+++..++..+.++ .+.+++.++.++|++.|.
T Consensus 279 ~vtgT~hKaL~GP~-GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~ 356 (493)
T PRK13580 279 IVTTTTHKTLRGPR-GGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFL 356 (493)
T ss_pred EEEeCChhhccCCC-eEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence 66 5679995432 478889999888885332 2333332 22444444445544422 367888889999998887
Q ss_pred HhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeecc----Cc----CCCEEEEeCCC----C
Q 011669 393 ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKG----GF----YGNVFRITPPL----C 460 (480)
Q Consensus 393 ~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~----~~~~iRi~p~~----~ 460 (480)
+. .+..+.. .....++.+.+.+. ......+.+.|.+.||++.+. .+ ....|||+++. .
T Consensus 357 ~~--G~~vv~g-gTdshIV~V~lg~~-------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg 426 (493)
T PRK13580 357 KR--GARLVTG-GTDNHLVLIDVTSF-------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLG 426 (493)
T ss_pred hc--CCCccCC-CCCCCEEEEEeCCH-------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcC
Confidence 75 3332210 12234556665221 112345677899999998642 11 14579999887 4
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 011669 461 FTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 461 ~t~~~id~~l~~l~~~l~ 478 (480)
++++|++++++.|.++++
T Consensus 427 ~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 427 MGSDEMDEVAELIVKVLS 444 (493)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 569999999999998875
No 304
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.60 E-value=7.2e-14 Score=140.54 Aligned_cols=313 Identities=11% Similarity=0.056 Sum_probs=187.5
Q ss_pred CCHHHHHHHHHHHHh---ccccccccCChHHHHHHHHHHHhCCCC-CCEEEEe-CCHHHHHHHHHHHHHhhcCCceEEEE
Q 011669 116 CHPYVVDSIVNQIKR---IQHSTVLYLNHAIADFAEALASKMPGN-LKVVFFT-NSGTEANELAIMMARLYTGCNDIISL 190 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~l~e~L~~~~~~~-~~~v~f~-~sGseA~~~Alk~ar~~~~~~~ii~~ 190 (480)
-+|+|++|+.++... ..|....+ .....+.++.|+++++.. ..+|+|+ +|||.+++.++..... + +.+..
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~f-~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~--~--~~l~i 88 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAPV-KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIE--K--KSLHL 88 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChHH-HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccc--c--cccEE
Confidence 378999998765211 13433322 467788899999999753 2367775 7799999999975431 2 33333
Q ss_pred cCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcce
Q 011669 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGII 270 (480)
Q Consensus 191 ~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 270 (480)
..+.||....-.+.... +. ..+..++.+ |+. .++..+ ..+++.|.+....+.+|.+
T Consensus 89 ~~G~~~~~~~~~a~~~~--~~-----~~~~~~~~~------~~~-------~~~~~~----~~~~~lV~~~h~et~tG~~ 144 (361)
T TIGR01366 89 SFGEFSSKFAKAVKLAP--WL-----GEPIIVTAD------PGS-------APEPQA----DPGVDVIAWAHNETSTGVA 144 (361)
T ss_pred ecCHHHHHHHHHHHhhh--cc-----CCceEEecC------CCC-------CCCCcc----CCCCCEEEEcccCCcccee
Confidence 34555644444433210 00 011222221 111 111111 2478899999999999998
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCC
Q 011669 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRR 348 (480)
Q Consensus 271 ~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~ 348 (480)
.| +++| ++++|+++|+|-+|+ +|. ....++ . .|++++| |++++--.++.++.++++++.+...
T Consensus 145 ~p----i~~I---~~~~g~~~iVDavqs-~g~---~~idv~--~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~ 209 (361)
T TIGR01366 145 VP----VRRP---EGSDDALVVIDATSG-AGG---LPVDIA--E--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAI 209 (361)
T ss_pred cc----cccc---cccCCCeEEEEcCcc-ccC---CCCCHH--H--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcc
Confidence 87 5555 689999999999998 542 121222 2 6888776 9888421255667788877665421
Q ss_pred Cc--------------------cccCCCcHHH-HHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 349 NY--------------------FNTFGGNPVC-TAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 349 ~~--------------------~~t~~~~~~~-~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
.. ..|.+.+++. ..+..++|+.+.++ ...++.+++.+++++.+.++.........
T Consensus 210 ~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~ 289 (361)
T TIGR01366 210 AASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTD 289 (361)
T ss_pred cCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 10 1334444444 33556777777654 34466667777777777766311011111
Q ss_pred Eec-cceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhC
Q 011669 404 VRG-RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG--FYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480 (480)
Q Consensus 404 v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~~ 480 (480)
... ......+.+. + ......+.+.|.++||.+.++. ...+.+|++....+|++||++++++|+++++++
T Consensus 290 ~~~~s~~v~~v~~~-~-------g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 290 PGKRSQVVGTIDFV-D-------DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred hhhcccceEEEECC-C-------ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 100 1111234442 1 1124668888889999987642 124579999999999999999999999998764
No 305
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.59 E-value=6.4e-13 Score=146.13 Aligned_cols=303 Identities=14% Similarity=0.184 Sum_probs=195.1
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHH----HHHHHHHHHHHhhcCC--ceEEEEcCCcccccccccccccCCCcccc
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGT----EANELAIMMARLYTGC--NDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGs----eA~~~Alk~ar~~~~~--~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...+.+++++|+++++ .+.|.|+.+++ +|+..+++......|. .++|+....-||.........
T Consensus 567 ~~~~~~~r~~la~i~g--~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~-------- 636 (993)
T PLN02414 567 QEMFEDLGDLLCEITG--FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMC-------- 636 (993)
T ss_pred HHHHHHHHHHHHHHhC--CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHC--------
Confidence 3556789999999995 48899998888 8888888876543221 236666678888777555442
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
|+..+.+|....+. .| +++|+++++.+ .+++++|++...++.+|...+ +++|.++|+++|+++++
T Consensus 637 ----G~~vv~v~~d~~G~--vD----le~L~~~i~~~-~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~v 701 (993)
T PLN02414 637 ----GMKIVVVGTDAKGN--IN----IEELRKAAEAH-KDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYM 701 (993)
T ss_pred ----CCEEEEeccCCCCC--cC----HHHHHHHHhcc-CCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEE
Confidence 33333333211111 13 68888888743 247899999988888998877 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceeeec--cccc-----cCccccccccCHHHHHhhcCCC-----------c---cc
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG-----NGIPLGAVVTTPEIAEVLTRRN-----------Y---FN 352 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g-----~G~pig~v~~~~~~~~~l~~~~-----------~---~~ 352 (480)
|-+|. .+..+ . ........|+++++ |+|+ ||-.+|.+.++++++..+-... . .+
T Consensus 702 DgAq~-~a~~~--l--~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iG 776 (993)
T PLN02414 702 DGANM-NAQVG--L--TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLG 776 (993)
T ss_pred EecCH-HhccC--c--CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcC
Confidence 99985 22212 1 11123457888774 8776 3466899999998876654321 0 12
Q ss_pred cCC----CcHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHhHHhcCceeeEeccce---eEEEEEecCCCcC
Q 011669 353 TFG----GNPVCTAAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF---LLGVEFVTDRQLK 422 (480)
Q Consensus 353 t~~----~~~~~~aaa~a~L~~i~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~---~~~i~~~~~~~~~ 422 (480)
|.. ++.+...+++.-++.+-.+.+ .++...+..|++++|.+. ++... ....|. -+.+.+..-+ +
T Consensus 777 t~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~-~~~~~~~~hEfv~~~~~l~--~ 850 (993)
T PLN02414 777 TISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLF-RGKNGTCAHEFIIDLRPFK--N 850 (993)
T ss_pred CccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCccc-cCCCCCeeeeEEEeccccc--c
Confidence 222 333444555555665555655 566677788888888662 33221 111122 1122221100 0
Q ss_pred CCCHHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 423 TPAKAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 423 ~~~~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.....+..+.+.|.+.|+....-. +..+.+||+|.-..|++|+|+++++|..+..+
T Consensus 851 -~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 851 -TAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred -ccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 001124678899999999875422 12578999999999999999999999876543
No 306
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.59 E-value=1.9e-12 Score=131.50 Aligned_cols=313 Identities=17% Similarity=0.128 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++-.+++.+.+..... +..+...+++++++++++. +..++++||++|+..+++... ..+++.||+..++|++.
T Consensus 10 ~~~~~~v~~~~~~~~~----~~g~~~~~le~~la~~~g~--~~~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~~~~ 82 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL----TQGPTVPAFEEALAEYVGA--KYAVAFNSATSALHIACLALG-VGPGDRVWTTPITFVAT 82 (380)
T ss_pred HHHHHHHHHHHhcCCc----cCChhHHHHHHHHHHHHCC--CeEEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHH
Confidence 4557777777765322 2346678899999999864 456778899999999998652 23578899999888765
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....... |...+.++... ..+..| .+++++.++....+++++|++.. ..|...+ +
T Consensus 83 ~~~~~~~-------------G~~~~~~~~~~-~~~~~d----~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~ 137 (380)
T TIGR03588 83 ANCALYC-------------GAKVDFVDIDP-DTGNID----EDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----M 137 (380)
T ss_pred HHHHHHc-------------CCEEEEEecCC-CcCCcC----HHHHHHHhhcccCCCceEEEEeC---CCCccCC----H
Confidence 4322211 22222222110 112223 57788887632113566776432 2455544 8
Q ss_pred HHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC--Ccceeeec----cccccCccccccccC-HHHHHhhcCCCc
Q 011669 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV--VPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRRNY 350 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~--~pDivt~s----K~~g~G~pig~v~~~-~~~~~~l~~~~~ 350 (480)
++|.++|++||+++|+|++|+ +|-. +.....|. .-|++++| |.++.| .-|+++.. +++.+.+.....
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a-~g~~----~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~ 211 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHA-LGAE----YGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRS 211 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCc-ccCc----cCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHH
Confidence 999999999999999999997 4311 11112233 34777766 888754 34556554 666655432100
Q ss_pred -------------------------cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEe
Q 011669 351 -------------------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405 (480)
Q Consensus 351 -------------------------~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~ 405 (480)
+..+..+.+..+.+++.|+.+ +...++.+++.+++.+.|..+. .........
T Consensus 212 ~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~-~~~~~~~~~ 288 (380)
T TIGR03588 212 HGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLP-YFTPLTIPL 288 (380)
T ss_pred CCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCC
Confidence 011222456556666666643 4556666777777777776652 111011101
Q ss_pred cc--c-eeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC----------------cC-------CCEEEEeCCC
Q 011669 406 GR--G-FLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG----------------FY-------GNVFRITPPL 459 (480)
Q Consensus 406 g~--g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------~~-------~~~iRi~p~~ 459 (480)
+. . .+..+.+... . ....+.+.+.|.++||.+...- .. .+.+++-...
T Consensus 289 ~~~~~~~~~~i~~~~~-~-----~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~ 362 (380)
T TIGR03588 289 GSKSAWHLYPILLDQE-F-----GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP 362 (380)
T ss_pred CCEeEEEEEEEEECCc-C-----CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC
Confidence 11 1 1222223211 0 1124678888999999875321 00 1456665556
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 011669 460 CFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 460 ~~t~~~id~~l~~l~~~l 477 (480)
..|++|++.+++.|++++
T Consensus 363 ~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 363 ALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 679999999999998864
No 307
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.58 E-value=9.8e-13 Score=135.27 Aligned_cols=309 Identities=17% Similarity=0.154 Sum_probs=178.9
Q ss_pred HHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHH-------hhcCCceEEEEcCC
Q 011669 121 VDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMAR-------LYTGCNDIISLRNA 193 (480)
Q Consensus 121 ~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar-------~~~~~~~ii~~~~~ 193 (480)
.+++.+.+...+.. ..+...+|+++|+++++. +.+++++|||+|+..|++.+. ...+++.||+..++
T Consensus 47 ~~a~~~~~~~~~~~----~G~~~~~fe~~lA~~~g~--~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t 120 (438)
T PRK15407 47 LQNLVDASLDFWLT----TGRFNDAFEKKLAEFLGV--RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAG 120 (438)
T ss_pred HHHHHHHHHhCccc----CChhHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCC
Confidence 44455555543222 235578899999999954 579999999999999998663 23467889999999
Q ss_pred cccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCC
Q 011669 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 194 yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~ 273 (480)
|.+........ |...+.++.. ...|+.| .+++++.++ .++++|++.+..|. .
T Consensus 121 ~~a~~~~v~~~-------------G~~pv~vdvd-~~~~~id----~~~le~~i~----~~tkaVi~~~~~G~---p--- 172 (438)
T PRK15407 121 FPTTVNPIIQN-------------GLVPVFVDVE-LPTYNID----ASLLEAAVS----PKTKAIMIAHTLGN---P--- 172 (438)
T ss_pred cHHHHHHHHHc-------------CCEEEEEecC-CCcCCcC----HHHHHHHcC----cCCeEEEEeCCCCC---h---
Confidence 97655443322 2222222111 0123333 567777764 36788888876442 2
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec----cccccCccccccccCH-HHHHhhcCC
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTTP-EIAEVLTRR 348 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~~-~~~~~l~~~ 348 (480)
..+++|.++|++||+++|+|++|+ +|-. +-+ ...|-.-|+.+|| |.+..|- -|++++++ ++.+.+...
T Consensus 173 -~dl~~I~~la~~~gi~vIeDaa~a-~G~~---~~g-~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~ 245 (438)
T PRK15407 173 -FDLAAVKAFCDKHNLWLIEDNCDA-LGST---YDG-RMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESF 245 (438)
T ss_pred -hhHHHHHHHHHHCCCEEEEECccc-hhhh---cCC-eeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHH
Confidence 238999999999999999999997 4421 111 1123334777665 7776543 37777764 444332210
Q ss_pred ----C-----------------------------------ccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 011669 349 ----N-----------------------------------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKE 389 (480)
Q Consensus 349 ----~-----------------------------------~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~ 389 (480)
. .+..+..+.+.++.++..|+.+ ++..++-+++.+++.+
T Consensus 246 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~ 323 (438)
T PRK15407 246 RDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKE 323 (438)
T ss_pred HHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 0 1122334577778888888765 3455666666677777
Q ss_pred HHHHhHHhcCceeeEecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC--c------------------
Q 011669 390 RLTALKDKYGIIGDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG--F------------------ 448 (480)
Q Consensus 390 ~L~~l~~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~------------------ 448 (480)
.|..+...........+. ..++.+.+.-+... ....+.+.+.|.++||-..... .
T Consensus 324 ~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~ 399 (438)
T PRK15407 324 GLASLEDFLILPEATPNSDPSWFGFPITVKEDA----GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGEL 399 (438)
T ss_pred HhccCCCccccCcCCCCCeeEEEEEEEEECCcC----CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCC
Confidence 765532101011111111 12222222111110 1124678899999999654210 0
Q ss_pred ------CCCEEEEeCC--CCCCHHHHHHHHHHHHHHHh
Q 011669 449 ------YGNVFRITPP--LCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 449 ------~~~~iRi~p~--~~~t~~~id~~l~~l~~~l~ 478 (480)
.... |+.| ...|++|++..+++|+++++
T Consensus 400 P~ae~~~~~~--l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 400 TNTDRIMNDT--FWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hHHHHHHhCe--EEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 0112 3333 33589999999999998874
No 308
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.58 E-value=1.7e-12 Score=134.43 Aligned_cols=325 Identities=13% Similarity=0.049 Sum_probs=180.5
Q ss_pred CCCHHHHHHHHHHH-Hhccccc--cccC--C---hHHHHHHHH-HHHhCCCCCCEEEE---eCCHHHHHHHHHHHHHhhc
Q 011669 115 HCHPYVVDSIVNQI-KRIQHST--VLYL--N---HAIADFAEA-LASKMPGNLKVVFF---TNSGTEANELAIMMARLYT 182 (480)
Q Consensus 115 h~~p~v~~A~~~~~-~~~~~~~--~~~~--~---~~~~~l~e~-L~~~~~~~~~~v~f---~~sGseA~~~Alk~ar~~~ 182 (480)
+..|.|.+|+...+ .++.... ..|. + +.+++++.+ ..+.+....+.+.| .+||+.||..++.....
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~-- 122 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ-- 122 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--
Confidence 45699999999888 4543211 1221 2 233333333 44556544343323 48999999999986643
Q ss_pred CCceEEEEcC---Cc--ccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEE
Q 011669 183 GCNDIISLRN---AY--HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAG 257 (480)
Q Consensus 183 ~~~~ii~~~~---~y--hG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~ 257 (480)
+++.|+..+- ++ |++......++....+ +..+++.. .. ++.....++|++++... +++.
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~--------~~~~~y~~--~~---~~g~iD~d~Le~~l~~~---~pkl 186 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIY--------FESMPYRL--DE---STGLIDYDKLEKKAMLF---RPKL 186 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccccceEE--------EEeeeeee--cC---CCCCcCHHHHHHHHhhc---CCeE
Confidence 6778887442 11 3322211111111100 00111110 00 01111167888888642 3445
Q ss_pred EEE-cccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCccccc
Q 011669 258 FLS-ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGA 334 (480)
Q Consensus 258 vi~-epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~ 334 (480)
|++ +.+. |...+ +++|+++|++||+++++|++|. +|..+..... ...+ ..|++ |++|++.|... |+
T Consensus 187 Iv~~~S~~---s~~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~-~p~~-~~Div~~t~hK~L~GP~G-g~ 255 (475)
T PLN03226 187 IIAGASAY---PRDWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAA-SPFE-YCDVVTTTTHKSLRGPRG-GM 255 (475)
T ss_pred EEEecCcC---CCccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCC-CCCC-CCeEEEecCcccccCCCc-eE
Confidence 555 4443 33333 8899999999999999999996 5544311111 1111 36766 56699965322 66
Q ss_pred cccCHHHH-----------H---hhcCCC-ccccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHH
Q 011669 335 VVTTPEIA-----------E---VLTRRN-YFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKD 396 (480)
Q Consensus 335 v~~~~~~~-----------~---~l~~~~-~~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~ 396 (480)
+++++++. + .+.... ...+-+.++...++..++|+.+.++ .+.+++.++.+++++.|.+.
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-- 333 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-- 333 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 77777543 2 222211 1122234466666677778887643 46788888888888888764
Q ss_pred hcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------cCCCEEEEeC----CCCCCHHH
Q 011669 397 KYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------FYGNVFRITP----PLCFTKED 465 (480)
Q Consensus 397 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iRi~p----~~~~t~~~ 465 (480)
.+.++..- ....+..+++.... ....++.+.|.+.||++..+. .....+|+.. ...++++|
T Consensus 334 G~~l~~~~-t~~hi~lv~~~~~g-------i~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 334 GYKLVTGG-TDNHLVLWDLRPLG-------LTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred CCEEEcCC-CCCCEEEEEccCCC-------CCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 33322210 11345556653221 123457777888999986542 1134588833 34578899
Q ss_pred HHHHHHHHHHHHh
Q 011669 466 ADYLVDVMDYSLS 478 (480)
Q Consensus 466 id~~l~~l~~~l~ 478 (480)
++++.+.|.++++
T Consensus 406 ~~~ia~~i~~~~~ 418 (475)
T PLN03226 406 FEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 309
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.7e-13 Score=131.15 Aligned_cols=353 Identities=16% Similarity=0.122 Sum_probs=213.6
Q ss_pred EEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccc-----ccCChHHHHHHHHHHHhCCCCCC
Q 011669 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV-----LYLNHAIADFAEALASKMPGNLK 159 (480)
Q Consensus 85 ~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~l~e~L~~~~~~~~~ 159 (480)
++...+.++ ..||+.++.|.+....... .++++.+.+...+.+++.++- .+.-+...++.+.|+++++. +
T Consensus 81 ~e~~~~~~~-~i~G~~~~N~aS~NfL~l~--~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~--E 155 (467)
T KOG1358|consen 81 LESVMLPHV-TIDGKDVLNFASANFLGLI--ENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT--E 155 (467)
T ss_pred cccccCCce-EecCceeecccchhhhhhc--ccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC--c
Confidence 444444443 5899999999876554433 368999999999998754321 33456778999999999964 4
Q ss_pred EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHH
Q 011669 160 VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239 (480)
Q Consensus 160 ~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~ 239 (480)
..++-+-|-.+++.++.. ++.+.+|+..+-.-+-...-.+.++......+.+ +|
T Consensus 156 ~aivYs~gF~ti~S~ipa---fsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------------------nd---- 209 (467)
T KOG1358|consen 156 DAIVYSYGFSTIESAIPA---FSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------------------ND---- 209 (467)
T ss_pred ceeeeccccchhhhcchh---hhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------------------CC----
Confidence 444556677778877774 4456777776555443333333333322111111 23
Q ss_pred HHHHHHHHHcc------CCC---ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCC-ccc
Q 011669 240 AKDVQDLIDFG------TSG---HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-FWG 309 (480)
Q Consensus 240 ~~~le~~i~~~------~~~---~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~-~~~ 309 (480)
.+++|.++... .++ ....+++|.+.-+.|.+.| +++|.++..||..-+|.||.++ ||-.|.. ..-
T Consensus 210 m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~GrGv 284 (467)
T KOG1358|consen 210 MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTGRGV 284 (467)
T ss_pred HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccCccc
Confidence 34554444211 111 2568899999999999988 9999999999999999999987 6544321 122
Q ss_pred ccccCCC---cceeee--ccccc-cCccccccccCHHHHH--hhcCCCccccCCCcHHHHHHHHHHHHHhhhh-HHHHHH
Q 011669 310 FEAHGVV---PDIVTM--AKGIG-NGIPLGAVVTTPEIAE--VLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD-KLQNNA 380 (480)
Q Consensus 310 ~~~~~~~---pDivt~--sK~~g-~G~pig~v~~~~~~~~--~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~-~~~~~~ 380 (480)
.+++++. .|+++. +-+++ +| |+++++.-+++ ++....+..+-+.+|....||..++.+++++ +..+.+
T Consensus 285 teH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L 361 (467)
T KOG1358|consen 285 TEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPL 361 (467)
T ss_pred cccCCCCccceeeeeecccccccccC---ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhh
Confidence 4677764 467654 45565 23 44555444332 2222222233345677778888888876653 445555
Q ss_pred HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--------CCCE
Q 011669 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--------YGNV 452 (480)
Q Consensus 381 ~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------~~~~ 452 (480)
+.....+...|... -.....-.....++.+.+.....+.+.+-...+.+++.+..+|+++..... ....
T Consensus 362 ~~k~~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pS 438 (467)
T KOG1358|consen 362 RAKVAKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPS 438 (467)
T ss_pred hccccccchhhhcC---CceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCc
Confidence 55555555555442 111111112233444455433222222223456788888777988865321 1246
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 453 FRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 453 iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
+||+....++++|++.+.+.|++....
T Consensus 439 iri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 439 IRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999987643
No 310
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.57 E-value=4.6e-13 Score=135.47 Aligned_cols=286 Identities=16% Similarity=0.127 Sum_probs=171.0
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
..+.++...+|+++|+++++. +.+++++||+.|+..++.+ ..+++.||+.++.|.+......... .
T Consensus 42 ~r~~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~l---l~~Gd~Vl~~~~~y~~~~~~~~~~~---------~ 107 (378)
T TIGR01329 42 TRSGNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITRL---LNNGDEIIAGDDLYGGTDRLLTQVV---------P 107 (378)
T ss_pred CCCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHH---hCCCCEEEEcCCCchHHHHHHHHHH---------H
Confidence 334567788999999999865 5677889999998877652 2467889988888754322111000 0
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++. .| .+++++.++ +++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|+
T Consensus 108 ~~G~~v~~vd~-------~d----~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~ 168 (378)
T TIGR01329 108 RSGVVVVHVDT-------TD----LDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDN 168 (378)
T ss_pred HcCcEEEEeCC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEEC
Confidence 11333333221 12 467777774 37889999999899998876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCccee--eecccccc--CccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
+|.. +... .. . +...|++ +.+|.++| +...|+++++ +++.+.+...........+|..+..++..|+.
T Consensus 169 a~~~-~~~~-~~--l---~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t 241 (378)
T TIGR01329 169 TMMS-PLLC-NP--L---ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT 241 (378)
T ss_pred CCcc-cccC-Ch--h---hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC
Confidence 9842 1111 11 1 2235666 56799985 3668888774 55555554322212233456655443333332
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEEecCCCcCCCCHHHHHHH
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEFVTDRQLKTPAKAETLYI 432 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~ 432 (480)
+ ....++..++...+.+.|+ +++.+. ...+.|.++.|++ .+ .....++
T Consensus 242 l--~~R~e~~~~na~~la~~L~----~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~-------~~~~~~~ 307 (378)
T TIGR01329 242 L--AIRIEKQQENARAIAMFLS----THPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GS-------VALSKRL 307 (378)
T ss_pred H--HHHHHHHHHHHHHHHHHHH----hCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CC-------HHHHHHH
Confidence 2 1223333444444444444 333221 1235677888887 21 1224567
Q ss_pred HHHHHHcCceeeccCc-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 433 MDKMKEMGVLVGKGGF-------------------------YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 433 ~~~l~~~Gv~v~~~~~-------------------------~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+.|...++.+..|+. ..+.|||+..+ |+.+.+++-|+++|++
T Consensus 308 ~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 308 VEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred HHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 7777655655544431 13578988554 4566667777776654
No 311
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=8.9e-13 Score=133.96 Aligned_cols=288 Identities=15% Similarity=0.101 Sum_probs=169.7
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
.+..++...+|+++|+++.+.. + .+.++||+.|+..++. +. .++++||+.++.|++......... .
T Consensus 49 ~r~~~p~~~~le~~lA~l~g~~-~-~v~~~sG~~ai~~~l~-~l--~~Gd~Vlv~~~~y~~~~~~~~~~~---------~ 114 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGGT-K-GFAFASGMAAISTAFL-LL--SKGDHVLISEDVYGGTYRMITEVL---------S 114 (390)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-C-eEEECCHHHHHHHHHH-Hh--CCCCEEEEccCccchHHHHHHHHH---------H
Confidence 4455788899999999998654 3 4567999999998885 22 367889999998875432211110 0
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++. .| .+++++.++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|+||
T Consensus 115 ~~G~~v~~v~~-------~d----~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~ 175 (390)
T PRK08064 115 RFGIEHTFVDM-------TN----LEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDN 175 (390)
T ss_pred HcCCEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEEC
Confidence 01333222221 12 466766664 36789999998888998876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCccee--eecccccc--CccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN--GIPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~--G~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
+|..+. .. .. . .+| .|++ +++|.++| |.-.|+++++ +++++.+...........+|..+...+..++.
T Consensus 176 a~~~~~-~~-~~--~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~t 248 (390)
T PRK08064 176 TFLTPL-LQ-KP--L-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKT 248 (390)
T ss_pred CCCccc-cc-Cc--h-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence 986431 11 11 1 123 4666 56799974 3445666654 67777766433222233444444443333322
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHH----hcCce----------eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHH
Q 011669 371 IQKDKLQNNAHVVGSYLKERLTALKD----KYGII----------GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKM 436 (480)
Q Consensus 371 i~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~~----------~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l 436 (480)
+ ....++..+....+.+.|++... .||.. ....+.|.++.|++.. . ..+.+.+
T Consensus 249 l--~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--------~---~~~~~f~ 315 (390)
T PRK08064 249 L--HVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--------E---EAVRQFV 315 (390)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--------H---HHHHHHH
Confidence 1 12233334444444444443210 01111 1234678888888831 1 1223333
Q ss_pred HHcCce---eecc-------------------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 437 KEMGVL---VGKG-------------------------GFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 437 ~~~Gv~---v~~~-------------------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
...++. +.-| |...+.+|++..+..+++.|+.+.++|+++
T Consensus 316 ~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 316 SHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred HhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 334442 1111 011368999999988888888888888764
No 312
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=1e-12 Score=132.60 Aligned_cols=198 Identities=13% Similarity=0.030 Sum_probs=125.6
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
+++..++....|++.|++...+ .. .++++||++|+..++.... .++++||+.++.|.++........
T Consensus 58 YsR~gnPt~~~Le~~la~le~~-~~-~v~~sSG~aAi~~~l~all--~~GD~Vlv~~~~Y~~~~~l~~~~l--------- 124 (395)
T PRK05967 58 YGTRGTPTTDALCKAIDALEGS-AG-TILVPSGLAAVTVPFLGFL--SPGDHALIVDSVYYPTRHFCDTML--------- 124 (395)
T ss_pred cCCCCChHHHHHHHHHHHHhCC-CC-EEEECcHHHHHHHHHHHhc--CCCCEEEEccCCcHHHHHHHHHHH---------
Confidence 3456689999999999987643 23 4677789999999986553 377899999999987543221111
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .+ .+.++++++ +++++|++|.+.|+.+.+.+ +++|.++|+++|+++|+|
T Consensus 125 ~~~Gi~v~~vd~-------~~----~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD 185 (395)
T PRK05967 125 KRLGVEVEYYDP-------EI----GAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMD 185 (395)
T ss_pred HhcCeEEEEeCC-------CC----HHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEE
Confidence 011333222211 11 245777774 36889999987777776665 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCcceeeecccccc--CccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN--GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~--G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
++|..... .-...+|...-+.+.+|.++| ..-.|+++.++++.+.+........-..+|..+...+..|+
T Consensus 186 ~t~a~p~~-----~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~ 257 (395)
T PRK05967 186 NTWATPLY-----FRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLR 257 (395)
T ss_pred CCccCcee-----cChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc
Confidence 99964211 111123433333467899986 37778888888766655421111112245665554444333
No 313
>PRK05939 hypothetical protein; Provisional
Probab=99.55 E-value=7.6e-13 Score=134.44 Aligned_cols=168 Identities=15% Similarity=0.141 Sum_probs=114.2
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...++.++...+|+++|+++.+. +..+.++||+.|+..++.... .++++||+.+..|.+.......+.
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~--~~~v~~ssG~~Ai~~~l~all--~~Gd~Vv~~~~~y~~t~~~~~~l~------- 107 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGG--VGTVCFATGMAAIAAVFLTLL--RAGDHLVSSQFLFGNTNSLFGTLR------- 107 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHc--CCCCEEEECCCccccHHHHHHHHH-------
Confidence 334456688999999999999864 446788899999999987653 367789888877754322111110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
..|+....++. .| .+++++.++ +++++|++|.++|++|.+.+ +++|.++|++||+++|
T Consensus 108 ---~~G~~v~~v~~-------~d----~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~li 165 (397)
T PRK05939 108 ---GLGVEVTMVDA-------TD----VQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYV 165 (397)
T ss_pred ---hcCCEEEEECC-------CC----HHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEE
Confidence 11333332221 12 567777774 36889999999999998866 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCcceeeecccccc-CccccccccC
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPLGAVVTT 338 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~-G~pig~v~~~ 338 (480)
+|++|.. + ..+.....|....+.+++|.+++ |..+|+++..
T Consensus 166 vD~t~a~----~-~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 166 VDNTMTS----P-WLFRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred EECCccc----c-cccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 9999852 1 11111122333333478899996 8888887764
No 314
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.55 E-value=1.2e-12 Score=134.43 Aligned_cols=163 Identities=21% Similarity=0.219 Sum_probs=113.6
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
....++...+|+++|++..+. +..++++||++|+.++++.+.. ++++||+....|+|........ ..
T Consensus 58 ~r~~~p~~~~le~~lA~l~g~--~~al~~~SG~~Ai~~al~all~--pGd~VIv~~~~y~~t~~~~~~~---------~~ 124 (427)
T PRK05994 58 TRITNPTNAVLEERVAALEGG--TAALAVASGHAAQFLVFHTLLQ--PGDEFIAARKLYGGSINQFGHA---------FK 124 (427)
T ss_pred ECCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhC--CCCEEEEecCcchhHHHHHHHH---------HH
Confidence 345577788999999999864 4578999999999999987643 6789999999997643221100 01
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++. .| .+++++.++ +++++|++|.++|++|.+.+ +++|.++|++||+++|+|+
T Consensus 125 ~~G~~v~~vd~-------~d----~~~l~~ai~----~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~ 185 (427)
T PRK05994 125 SFGWQVRWADA-------DD----PASFERAIT----PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDN 185 (427)
T ss_pred hcCcEEEEECC-------CC----HHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 12333332221 12 467777774 36889999999999998876 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCcceee--ecccccc-Ccccccccc
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-GIPLGAVVT 337 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~-G~pig~v~~ 337 (480)
+|+. + . ........+|+++ ++|.+++ |-.+|+++.
T Consensus 186 a~a~----~-~--~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 186 TLAS----P-Y--LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred Cccc----c-c--cCCccccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 9862 2 1 1222345677764 6799985 445665444
No 315
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.54 E-value=5.7e-12 Score=117.48 Aligned_cols=313 Identities=17% Similarity=0.183 Sum_probs=189.4
Q ss_pred ccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEE
Q 011669 111 VCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIIS 189 (480)
Q Consensus 111 ~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~ 189 (480)
.++||-||++.+-+.+-++.. ...+.. +..-..+..||+.+.|.|+-.... +++.+++
T Consensus 39 ~~lgh~sPe~~qIm~~v~egi-------------------kyVFkT~n~~tf~isgsGh~g~E~al~N~le--Pgd~vLv 97 (385)
T KOG2862|consen 39 PSLGHMSPEFVQIMDEVLEGI-------------------KYVFKTANAQTFVISGSGHSGWEAALVNLLE--PGDNVLV 97 (385)
T ss_pred CccccCCHHHHHHHHHHHHHH-------------------HHHhccCCCceEEEecCCcchHHHHHHhhcC--CCCeEEE
Confidence 456777777777665544432 222221 123467888999999999986655 7888888
Q ss_pred EcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcc
Q 011669 190 LRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGI 269 (480)
Q Consensus 190 ~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~ 269 (480)
+..+-.|....-+.-. .|+.....+.++.... -++++++.+.++ ++.+|.+-..-..+|+
T Consensus 98 ~~~G~wg~ra~D~~~r-----------~ga~V~~v~~~~G~~~------~le~i~~~lsqh---~p~~vfv~hgdsSTgV 157 (385)
T KOG2862|consen 98 VSTGTWGQRAADCARR-----------YGAEVDVVEADIGQAV------PLEEITEKLSQH---KPKAVFVTHGDSSTGV 157 (385)
T ss_pred EEechHHHHHHHHHHh-----------hCceeeEEecCcccCc------cHHHHHHHHHhc---CCceEEEEecCccccc
Confidence 7766655433322211 1222222222111111 157788888764 6677888777778888
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhcCCC
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRN 349 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~~~~ 349 (480)
.++ .++...++|++|+.+|++|-|-+ +| | ..|.++.+|+..-...--|++++.-.++-+..++...+.++.+.
T Consensus 158 ~q~---~~~~~g~lc~k~~~lllVD~VaS-lg--g-t~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK 230 (385)
T KOG2862|consen 158 LQD---LLAISGELCHKHEALLLVDTVAS-LG--G-TEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRK 230 (385)
T ss_pred cch---HHHHHHHHhhcCCeEEEEechhh-cC--C-ccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhcc
Confidence 765 35677899999999999999987 54 3 45667777764433344599995444456888998888886542
Q ss_pred c--c---------ccCC-----------CcHH-HHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 350 Y--F---------NTFG-----------GNPV-CTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 350 ~--~---------~t~~-----------~~~~-~~aaa~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
. . .+|. ..|+ ......++|..|-++. ..++-++++++++..|+++--+.-....
T Consensus 231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e 310 (385)
T KOG2862|consen 231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDE 310 (385)
T ss_pred CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecCh
Confidence 1 0 1111 1233 3344557777776654 4566677888888888886211100000
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHhh
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF---YGNVFRITPP-LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~-~~~t~~~id~~l~~l~~~l~~ 479 (480)
-........+. .|...+..++...+..++.+...+|. .+.++||..- .+.+.+.|+..++.|..++.+
T Consensus 311 ~~rlptvttv~--------vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 311 ELRLPTVTTVK--------VPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred hhccCcceeee--------cCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 00000011111 23444567788888888655544433 2578999743 334779999999999988753
No 316
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.54 E-value=2.4e-12 Score=131.06 Aligned_cols=307 Identities=14% Similarity=0.066 Sum_probs=175.8
Q ss_pred ChHHHHHHHHHHHhCCCC-CCEEEEeCCHH-HHHHHHHHHHHhhc-CCceEEEEcCCcccccccccccccCCCccccccC
Q 011669 140 NHAIADFAEALASKMPGN-LKVVFFTNSGT-EANELAIMMARLYT-GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~-~~~v~f~~sGs-eA~~~Alk~ar~~~-~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 216 (480)
.....++.+.+++.++.. .+.++++++|| .++.+++..++... +++.||+.... |-.+..++...+.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~--------- 173 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGF--------- 173 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCC---------
Confidence 345567777788887543 23688999999 79998888776432 35678887776 5555555444432
Q ss_pred CCeeEecCCC-CcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 217 TGVHHALNPD-PYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 217 ~g~~~~~~p~-~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..+.++. .....|.-| .++++++|+...++.+.+|+..|..+..|... .+++|.++|++||+++|+|+
T Consensus 174 ---~pv~Vd~~~d~~~~~iD----~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d----dL~eIa~la~k~gI~lIvDa 242 (444)
T TIGR03531 174 ---EPRVIETVLDGDELTTD----VEDIERAIEEIGPDNILCVLSTTSCFAPRSPD----DIEEIAKICANYDIPHIVNN 242 (444)
T ss_pred ---eEEEeeeeecCcCCCcC----HHHHHHHHHhccCCCEEEEEEcCCcCCCcchh----CHHHHHHHHHHcCCEEEEEC
Confidence 1111111 011123334 67888888743324667777666544334333 39999999999999999999
Q ss_pred cccCccccCCCcccccccCC-Ccceeee--cccccc-Ccccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHH
Q 011669 296 VQAGFARTGSHFWGFEAHGV-VPDIVTM--AKGIGN-GIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~-~pDivt~--sK~~g~-G~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
+|......-.+.. ...... ..|++++ .|.+.. |. -|.++. ++++++.+.....+ .. .+...+.+....+..
T Consensus 243 Ayg~~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g-~~-~~s~~~~~~~~ll~~ 318 (444)
T TIGR03531 243 AYGLQSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPG-RA-SASPSLDVLITLLSL 318 (444)
T ss_pred cCcCcChhhhhhh-hccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccC-CC-CChHHHHHHHHHHHh
Confidence 9963210000000 011111 2466654 598884 43 344446 57787777643222 22 223344444444433
Q ss_pred hhh--hHHHHHHHHHHHHHHHHHHHhHHhcCc-eeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCce----e
Q 011669 371 IQK--DKLQNNAHVVGSYLKERLTALKDKYGI-IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVL----V 443 (480)
Q Consensus 371 i~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~----v 443 (480)
-.+ +++.++..++.+++.+.|+++..+++. +.+++.-..-+++.+..-. ......+...|..++|- |
T Consensus 319 G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~------~~~~~~~g~~l~~~~v~g~r~v 392 (444)
T TIGR03531 319 GSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK------GKDPTMLGSMLYSRRVTGPRVV 392 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc------ccCHHHHHHHHHhCCCCCceee
Confidence 222 356677778888999999999888753 2233222223344442110 11245566677777652 2
Q ss_pred eccC-------cC---C--------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 444 GKGG-------FY---G--------NVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 444 ~~~~-------~~---~--------~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
.++. .| + .++-++..+.++++|||.++++|++++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 393 TNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 2221 01 1 134444456689999999999999863
No 317
>PLN02509 cystathionine beta-lyase
Probab=99.54 E-value=1.6e-12 Score=133.69 Aligned_cols=215 Identities=14% Similarity=0.068 Sum_probs=134.1
Q ss_pred ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC
Q 011669 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 216 (480)
.+.++...+++++++++.+ .+.+++++||+.|+.+++.+ ..++++||+.++.|.+......... ..
T Consensus 129 r~gnpt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~l---l~~GD~VI~~~~~y~~t~~ll~~~l---------~~ 194 (464)
T PLN02509 129 RSGNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTHL---IKNGEEIVAGDDVYGGSDRLLSQVV---------PR 194 (464)
T ss_pred CCCCHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHHH---hCCCCEEEEcCCchhhHHHHHHHHH---------HH
Confidence 3457888999999999885 35677889999888655532 3467889999999866432211100 01
Q ss_pred CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
.|+....++. .| .+++++.++ .++++|++|.+.+++|.+.. +++|.++|++||+++|+||+
T Consensus 195 ~G~~v~~vd~-------~d----~e~l~~ai~----~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A 255 (464)
T PLN02509 195 SGVVVKRVNT-------TN----LDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNS 255 (464)
T ss_pred CCeEEEEeCC-------CC----HHHHHHhCC----cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECC
Confidence 1333332221 12 466776664 36789999999998888765 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHHHHh
Q 011669 297 QAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371 (480)
Q Consensus 297 ~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i 371 (480)
|. .+..+ . ..+...|++ +++|.++| | .-.|+++++ +++.+.+...........+|..++.++..|+.+
T Consensus 256 ~a-~~~~~-~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL 328 (464)
T PLN02509 256 IM-SPVLS-R-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM 328 (464)
T ss_pred cc-ccccC-C-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhH
Confidence 84 22222 1 122345766 56799985 3 335666654 444443321111111224677777777777765
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q 011669 372 QKDKLQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 372 ~~~~~~~~~~~~~~~l~~~L~~ 393 (480)
. ...++..+...++.+.|++
T Consensus 329 ~--~R~~r~~~nA~~la~~L~~ 348 (464)
T PLN02509 329 A--LRIEKQQENARKIAMYLSS 348 (464)
T ss_pred H--HHHHHHHHHHHHHHHHHhc
Confidence 2 2445555555666665554
No 318
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.53 E-value=1.7e-12 Score=131.27 Aligned_cols=173 Identities=18% Similarity=0.117 Sum_probs=115.4
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...++.++...+|.++++++.+. +..++++||+.|+.+++.+ ..++++||+.++.|++.........
T Consensus 43 ~y~r~~~p~~~~Le~~la~l~g~--~~al~~~SG~~Al~~~l~~---l~pGd~Vi~~~~~y~~t~~~~~~~~-------- 109 (380)
T PRK06176 43 EYSRSGNPTRFALEELIADLEGG--VKGFAFASGLAGIHAVFSL---FQSGDHVLLGDDVYGGTFRLFDKVL-------- 109 (380)
T ss_pred cccCCCChhHHHHHHHHHHHhCC--CCEEEECCHHHHHHHHHHH---cCCCCEEEEcCCChhHHHHHHHHHH--------
Confidence 34567788999999999999864 4467889999999866642 2467889999988865432111110
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
...|+....++. .| .+++++.++ +++++|++|..+|++|.+.+ +++|.++|++||+++|+
T Consensus 110 -~~~gi~v~~vd~-------~d----~e~l~~ai~----~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~viv 169 (380)
T PRK06176 110 -VKNGLSCTIIDT-------SD----LSQIKKAIK----PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIV 169 (380)
T ss_pred -HhcCeEEEEcCC-------CC----HHHHHHhcC----cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEE
Confidence 112343332221 12 567777764 36889999988888888876 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCcceee--ecccccc-C-ccccccccC-HHHHHhhc
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTT-PEIAEVLT 346 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~-G-~pig~v~~~-~~~~~~l~ 346 (480)
|++|+.. ..+ .. .+...|+++ ++|.+++ | .-.|+++++ +++.+.+.
T Consensus 170 D~t~a~~-~~~-~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 170 DNTFATP-YYQ-NP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred ECCcccc-ccC-Cc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 9999742 112 11 133457765 5699985 4 334566664 56655554
No 319
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.53 E-value=1.6e-13 Score=122.27 Aligned_cols=167 Identities=23% Similarity=0.208 Sum_probs=113.9
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEe
Q 011669 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHA 222 (480)
Q Consensus 143 ~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (480)
+.++.+.+++.++.+.+.+++++||++|++.+++.++. .+++|++.++.||+......... |....
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~------------g~~~~ 67 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELA------------GAKPV 67 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhc------------CCEEE
Confidence 46788899999855567899999999999999998754 46789999999988763111111 22222
Q ss_pred cCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccc
Q 011669 223 LNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR 302 (480)
Q Consensus 223 ~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr 302 (480)
.++.........+ .+.+++.. ...+++++++++.++++|...+ +++|.++|+++|+++|+||+|.++..
T Consensus 68 ~v~~~~~~~~~~~----~~~~~~~~---~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~ 136 (170)
T cd01494 68 PVPVDDAGYGGLD----VAILEELK---AKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGAS 136 (170)
T ss_pred EeccCCCCccchh----hhhhhhcc---ccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccc
Confidence 2221111000000 11232222 2458899999999999888776 69999999999999999999997755
Q ss_pred cCCCcccccccCCCcceeeec--cccccCccccccccC
Q 011669 303 TGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT 338 (480)
Q Consensus 303 ~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~ 338 (480)
.. .. .......+|+++.| |.+++ .+.|+++++
T Consensus 137 ~~-~~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 137 PA-PG--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cc-cc--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 43 11 12223458888776 99987 788888764
No 320
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.52 E-value=2e-12 Score=130.01 Aligned_cols=315 Identities=12% Similarity=0.050 Sum_probs=176.7
Q ss_pred CCHHHHHHHHHHHHhcc--ccccccC-------ChHHHHHHHHHHHhCCC-CCCEEEEeCC-HHHHHHHHHHHHHhhcCC
Q 011669 116 CHPYVVDSIVNQIKRIQ--HSTVLYL-------NHAIADFAEALASKMPG-NLKVVFFTNS-GTEANELAIMMARLYTGC 184 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~--~~~~~~~-------~~~~~~l~e~L~~~~~~-~~~~v~f~~s-GseA~~~Alk~ar~~~~~ 184 (480)
.++.|.+|+.+.+.... +...... .....+.+++|+++++. ..++|+|+++ ||+|++.++.......++
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~ 89 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT 89 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 57899999999875431 1000011 15567889999999975 3456888865 999999999865321112
Q ss_pred ceEEEEcCCcccccccccc-cccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEccc
Q 011669 185 NDIISLRNAYHGNAAGTMG-ATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~-~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi 263 (480)
..+|+. +.| +....-+. -.+ ..+..++.+. .+.|+.. .+..+..+ .++++.|.+..+
T Consensus 90 ~~~i~~-g~~-~~~~~~~a~~~g----------~~~~~~~~~~--~g~~~~~----~~~~~~~~----~~~~~lV~~~h~ 147 (355)
T cd00611 90 ADYVVT-GAW-SAKAAKEAKRYG----------GVVVIVAAKE--EGKYTKI----PDVETWDL----APDAAYVHYCSN 147 (355)
T ss_pred EEEEEC-CHH-HHHHHHHHHhcC----------CCcEEEeccc--ccCCCCC----CCHhhcCC----CCCCCEEEEeCC
Confidence 233332 333 21111010 001 0122222221 1112110 01111112 236778888888
Q ss_pred CCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHH
Q 011669 264 QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAE 343 (480)
Q Consensus 264 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~ 343 (480)
.+.+|...+ ++++.||+++++|-+|+ +|.. ....+.++ .++.+--|.+| ...+|.+++++++.+
T Consensus 148 ~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~~---~idv~~~~--~~~ss~~K~lG-P~G~g~l~~~~~~~~ 211 (355)
T cd00611 148 ETIHGVEFD---------EVPDTGGVPLVADMSSN-ILSR---PIDVSKFG--VIYAGAQKNLG-PAGVTVVIVRKDLLG 211 (355)
T ss_pred cccccEEcc---------eecccCCCeEEEEcccc-ccCC---CCCHHHhC--EEEeecccccC-CCceEEEEECHHHHh
Confidence 888887632 45566999999999998 4422 22223333 23322448775 345789999999887
Q ss_pred hhcCCC-----------ccccCC-CcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCceeeEecc
Q 011669 344 VLTRRN-----------YFNTFG-GNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR 407 (480)
Q Consensus 344 ~l~~~~-----------~~~t~~-~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~ 407 (480)
.+.+.. ...+++ .|.....+..++|+.+.++ ++.++.+++.++++++|+++..-+........+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 655421 011233 3444566666888887654 345666677777777777652111111111112
Q ss_pred c-eeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 408 G-FLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 408 g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
. ..+.|.+... .....+...+.++|+...++-...+.+|+++...+|++|||.++++|+++
T Consensus 292 s~~vvsf~~~~~--------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 292 SRMNVPFRLGKE--------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CceEEEEEcCCh--------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 2 3344443110 11244556788899985444222468999999999999999999999985
No 321
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=1.9e-12 Score=130.92 Aligned_cols=235 Identities=19% Similarity=0.141 Sum_probs=141.2
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
...+.++...+|+++|+++.+. +..++++||+.|+..++.+ ..++++||+.++.|.+.........
T Consensus 44 y~r~~~p~~~~Le~~lA~l~g~--~~~~~~~sG~aai~~~~~~---l~~Gd~Viv~~~~y~~~~~~~~~~~--------- 109 (377)
T PRK07671 44 YSRTGNPTRAALEELIAVLEGG--HAGFAFGSGMAAITAVMML---FSSGDHVILTDDVYGGTYRVMTKVL--------- 109 (377)
T ss_pred cCCCCChHHHHHHHHHHHHhCC--CceEEeCCHHHHHHHHHHH---hCCCCEEEECCCccchHHHHHHHHH---------
Confidence 3466788999999999999864 3457789999888766532 2367889999998864332211110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .++++++++ +++++|++|..+|++|.+.. +++|.++|+++|+++|+|
T Consensus 110 ~~~G~~v~~v~~-------~d----~~~l~~ai~----~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD 170 (377)
T PRK07671 110 NRFGIEHTFVDT-------SN----LEEVEEAIR----PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVD 170 (377)
T ss_pred hcCCeEEEEECC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEE
Confidence 012333333221 12 467777774 36789999888888887765 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-C-cccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
|+|... ..+ .. .+...|++ +++|.++| + .-.|++++ ++++++.+........-..+|..+..++..++
T Consensus 171 ~a~~~~-~~~-~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 171 NTFMTP-YWQ-SP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred CCCCcc-ccC-Ch-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 998631 112 11 12234665 57799984 2 33455555 46677666533222222334555554444443
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCcee------------------eEeccceeEEEEE
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIG------------------DVRGRGFLLGVEF 415 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------~v~g~g~~~~i~~ 415 (480)
.+.. ..++..++...+.+.|++ ++.+. ...|.|.++.|++
T Consensus 244 tl~~--R~~~~~~na~~la~~L~~----~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 244 TLGI--RMEEHETNSRAIAEFLNN----HPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred hHHH--HHHHHHHHHHHHHHHHHc----CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 3221 233344444444444443 33221 1346678888888
No 322
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=2.7e-12 Score=129.38 Aligned_cols=238 Identities=15% Similarity=0.088 Sum_probs=150.4
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
.+.+..+|....|+++|+++-++ +..++++||+.|+.+++.... .+++.||+.+..|.+........
T Consensus 55 ~YsR~~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll--~~GD~Vv~~~~~Yg~t~~l~~~~--------- 121 (395)
T PRK08114 55 FYGRRGTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFV--EQGDHVLMTGTAYEPTQDFCSKI--------- 121 (395)
T ss_pred cccCCCChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHc--CCCCEEEEeCCCcHHHHHHHHHH---------
Confidence 34566789999999999998753 567889999999999887543 36788888888876554332111
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC--CEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG--GLC 291 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g--ill 291 (480)
....|+....++. .| .++++++++ +++++|++|.+.|+.|.+.+ +++|.++|+++| +++
T Consensus 122 l~~~Gi~v~~vd~-------~d----~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~l 182 (395)
T PRK08114 122 LSKLGVTTTWFDP-------LI----GADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVI 182 (395)
T ss_pred HHhcCcEEEEECC-------CC----HHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEE
Confidence 0112333322211 12 466777775 36899999999999999988 999999999985 999
Q ss_pred EEcccccCccccCCCcccccccCCCcceee--ecccccc-C-ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHH
Q 011669 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGN-G-IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 292 I~DEv~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~-G-~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~ 367 (480)
|+|.+++ +| .. ++......|+++ ..|.++| | .-.|.++.++++.+.+.......--..+|..+...+..
T Consensus 183 vVDnT~a----~p-~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rg 255 (395)
T PRK08114 183 MIDNTWA----AG-VL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRG 255 (395)
T ss_pred EEECCCc----cc-cc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcC
Confidence 9999986 22 11 333344567775 5599986 3 67787788887666554221111113346655544443
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEe
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFV 416 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~ 416 (480)
|+.+. -..++..+....+.+.|++ +|.+.. ..|.|.|+.|++.
T Consensus 256 l~TL~--lR~~~~~~na~~va~~L~~----hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 256 LRTLG--VRLRQHEESSLKVAEWLAE----HPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred CCcHH--HHHHHHHHHHHHHHHHHHc----CCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 33221 1233344444444444443 333221 2467888888884
No 323
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=4.2e-12 Score=130.26 Aligned_cols=165 Identities=20% Similarity=0.226 Sum_probs=114.6
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..++.++....|+++|+++.+. +..++++||+.|+..++.... .++++|++..+.|++.........
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll--~~GD~Vlv~~~~y~~t~~~~~~~~--------- 124 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIA--SAGDEIVSSSSLYGGTYNLFAHTL--------- 124 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEccCchhhHHHHHHHHH---------
Confidence 3456688899999999999863 567899999999999997553 367889998888765432211110
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++. .| .++++++++ +++++|+++.+.|++|.+.+ +++|.++|+++|+++|+|
T Consensus 125 ~~~Gv~v~~vd~-------~d----~e~l~~ai~----~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD 185 (431)
T PRK08248 125 PKLGITVKFVDP-------SD----PENFEAAIT----DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVD 185 (431)
T ss_pred HhCCEEEEEECC-------CC----HHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEe
Confidence 112444333322 12 567777774 36788999988888898876 899999999999999999
Q ss_pred ccccCccccCCCcccccccCCCccee--eecccccc-CccccccccC
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTT 338 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig~v~~~ 338 (480)
+++.. +.. ........|++ +++|.+++ |.++|++++.
T Consensus 186 ~t~a~-~~~------~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 186 NTFAS-PYL------LRPIEHGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred CCCCc-ccc------CChhHcCCCEEEEcCccccCCCCCceEEEEEe
Confidence 99851 111 11112335665 56799996 7788877663
No 324
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.50 E-value=1.8e-11 Score=123.23 Aligned_cols=345 Identities=14% Similarity=0.103 Sum_probs=189.3
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHH-HHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDS-IVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A-~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Al 175 (480)
....|||+.+-.++ +.+.++ +.. +....- ...-++...+|.+++++.++ .+.+++++||+.|...+.
T Consensus 36 ~~~v~iDLltDsgT-------~aMs~~q~a~-~~~GDe--~yag~~s~~~lE~~va~~~G--~~~av~v~sGT~Al~ll~ 103 (450)
T TIGR02618 36 SEDVYIDLLTDSGT-------NAMSDKQWAG-LMMGDE--AYAGSRNFYHLERTVRELYG--FKYVVPTHQGRGAENLLS 103 (450)
T ss_pred cCceEEEcccCCCc-------HHHHHHHHHH-hhhcch--hhcCCCcHHHHHHHHHHHHC--CCeEEEcCCHHHHHHHHH
Confidence 34589999876654 455555 322 222111 12236778899999999994 578999999999988643
Q ss_pred HHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC---CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC
Q 011669 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ---TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~---~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~ 252 (480)
. ....+++.| ..+.|...+...+...+. .+ ...+. .+.. ..+++.+.+ | +++++++|+....
T Consensus 104 ~--l~l~pGDeV--psn~~f~Tt~ahIe~~Ga-v~-vDi~~dea~~~~---~~~p~~Gni--D----~~~Le~aI~~~~~ 168 (450)
T TIGR02618 104 Q--IAIKPGDYV--PGNMYFTTTRYHQEKNGA-TF-VDIIIDEAHDAQ---LNIPFKGNV--D----LKKLQKLIDEVGA 168 (450)
T ss_pred H--hCCCCcCEE--CCceeHHHHHHHHHhCCe-EE-Eeeecccccccc---cCCCCCCCc--C----HHHHHHHhccccC
Confidence 2 222244444 444443333332322221 00 00000 0000 111222222 3 6889998875333
Q ss_pred CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccc-------cCCCccccccc------CCCcce
Q 011669 253 GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR-------TGSHFWGFEAH------GVVPDI 319 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr-------~G~~~~~~~~~------~~~pDi 319 (480)
.+++.|.++...+..|..+.+...+++++++|++||+.+|.|-++. |+- .. .+...... --..|.
T Consensus 169 ~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gNA~~I~~re~-g~~~~~i~ei~~e~~~~aD~ 246 (450)
T TIGR02618 169 DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VENAYFIKEREQ-GYEDKSIAEILKEMMSYADG 246 (450)
T ss_pred cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhChhhhhcccc-cccCCCHHHHHHHHhccCcE
Confidence 3556666666555443345577889999999999999999999885 321 00 01111110 013455
Q ss_pred eeeccccc-cCcccccccc--CHHHHHhhcCCC----ccccCCCcH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 320 VTMAKGIG-NGIPLGAVVT--TPEIAEVLTRRN----YFNTFGGNP-VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 320 vt~sK~~g-~G~pig~v~~--~~~~~~~l~~~~----~~~t~~~~~-~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
+++|+.- +|.|+|.+++ ++++++.++... ...|+++=. -.+.+..-+|+...+..+.++.....++|.+.|
T Consensus 247 -~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L 325 (450)
T TIGR02618 247 -CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKL 325 (450)
T ss_pred -EEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 4445553 4567676555 678887766531 223555421 123333334554445566677777788888888
Q ss_pred HHhHHhcCceeeEeccceeEEEEEecC----CCcCCCCHHHHHHHHHHH-HHcCceeeccCc-------------C--CC
Q 011669 392 TALKDKYGIIGDVRGRGFLLGVEFVTD----RQLKTPAKAETLYIMDKM-KEMGVLVGKGGF-------------Y--GN 451 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~g~~~~i~~~~~----~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~-------------~--~~ 451 (480)
.+. ..+++ .+..|..+.++...- +....| +..+.-.| ++.||--..-|. . -.
T Consensus 326 ~~~--Gvpv~--~p~ggh~V~vda~~~lph~~~~~~p----~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~e 397 (450)
T TIGR02618 326 KAA--GVPIV--EPVGGHAVFLDARRFLPHIPQDQFP----AQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLE 397 (450)
T ss_pred HHC--CCccc--CCCCcceEEEEhHHhCCCCChhhCh----HHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccc
Confidence 776 34432 244566666765431 111122 23333333 355554322110 0 14
Q ss_pred EEEEeCC-CCCCHHHHHHHHHHHHHHHhh
Q 011669 452 VFRITPP-LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 452 ~iRi~p~-~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+|+..| -..|.+++|.+.++|..+.++
T Consensus 398 l~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 398 LVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred eeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 6898877 456999999999999887653
No 325
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=8.4e-12 Score=127.99 Aligned_cols=165 Identities=20% Similarity=0.191 Sum_probs=112.9
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...++.++...+|+++++++.+.. .+++++||++|+.+++.... .++++||+....|++........
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll--~~Gd~Vi~~~~~y~~t~~~~~~~-------- 123 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLM--GAGSHIVASSALYGGSHNLLHYT-------- 123 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh--CCCCEEEEeCCccHHHHHHHHHH--------
Confidence 3334566889999999999998653 47899999999999997653 36778988888886543222110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
....|+....++. +| .++++++|+ +++++|++|.+.+++|.+.+ +++|.++|++||+++|
T Consensus 124 -l~~~Gi~v~~vd~-------~d----~~~l~~~i~----~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~li 183 (433)
T PRK08134 124 -LRRFGIETTFVKP-------GD----IDGWRAAIR----PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLL 183 (433)
T ss_pred -HhhCCeEEEEECC-------CC----HHHHHHhcC----CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEE
Confidence 0112443333221 12 567888875 37889999998888998887 9999999999999999
Q ss_pred EcccccCccccCCCcccccccCCCcceeee--cccccc-Cccccccc
Q 011669 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGN-GIPLGAVV 336 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~~~~~~~pDivt~--sK~~g~-G~pig~v~ 336 (480)
+|.+|. . | .. ........|++++ .|.+++ |--+|.++
T Consensus 184 vD~t~a-~---~-~~--~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v 223 (433)
T PRK08134 184 VDSTFT-T---P-YL--LRPFEHGADLVYHSATKFLGGHGTAIGGVL 223 (433)
T ss_pred EECCCc-c---c-cc--CCchhcCCCEEEeccccccCCCCCceEEEE
Confidence 999985 2 2 11 1112344677755 498875 54455443
No 326
>PLN02880 tyrosine decarboxylase
Probab=99.48 E-value=9.6e-12 Score=129.45 Aligned_cols=318 Identities=12% Similarity=0.003 Sum_probs=180.9
Q ss_pred ChHHHHHHHHHHHhCCCCC-------CEEEEeCCHHHHHHHHHHHHHhhcC--------CceEEEEcCCccccccccccc
Q 011669 140 NHAIADFAEALASKMPGNL-------KVVFFTNSGTEANELAIMMARLYTG--------CNDIISLRNAYHGNAAGTMGA 204 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~-------~~v~f~~sGseA~~~Alk~ar~~~~--------~~~ii~~~~~yhG~~~~~~~~ 204 (480)
.....++.++|+++++.+. ..-+|++||||||..||.+||...- +.-++.....-|....-+..+
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~ 200 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI 200 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence 3455677788888875432 1357899999999999999987421 122444444446655554444
Q ss_pred ccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHH
Q 011669 205 TAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282 (480)
Q Consensus 205 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~ 282 (480)
.+-+. ..+..++.+.. +.+.-| .+.|++.|++. ....+.+|+..--..+.|.+.| +++|.+
T Consensus 201 lGlg~-------~~v~~Vp~d~~--~~~~md----~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~ 263 (490)
T PLN02880 201 AGIHP-------ENCRLLKTDSS--TNYALA----PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGK 263 (490)
T ss_pred cCCCH-------HHEEEeecCCC--cCCcCC----HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHH
Confidence 43211 12334443211 111123 56777777531 1234566777666667788877 999999
Q ss_pred HHHHhCCEEEEcccccCccccCCCcccccccCC-Ccceeeec--cccccCccccccccCHH--HHHhhcCCC----c---
Q 011669 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE--IAEVLTRRN----Y--- 350 (480)
Q Consensus 283 l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pDivt~s--K~~g~G~pig~v~~~~~--~~~~l~~~~----~--- 350 (480)
+|++||+++++|-+|.|+...- ..+-....|+ ..|.+++. |.+...+++|.++.+.. +.+.+.... +
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~-~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~ 342 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACIC-PEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKAS 342 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhC-HHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccc
Confidence 9999999999999998753221 1111122354 57888765 99988899998887742 222222110 0
Q ss_pred --cccC--------CCcHHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHhHHhcCceeeE-eccceeEEEEEe
Q 011669 351 --FNTF--------GGNPVCTAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTALKDKYGIIGDV-RGRGFLLGVEFV 416 (480)
Q Consensus 351 --~~t~--------~~~~~~~aaa~a~L~~i~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~v-~g~g~~~~i~~~ 416 (480)
..++ .+..+.....+.+|+.+-.+.+.++++ ++.+++.+.|++. +...-+ .....++.|.+.
T Consensus 343 ~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~----~~~el~~~~~~~iv~Fr~~ 418 (490)
T PLN02880 343 QANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD----SRFEVVTPRIFSLVCFRLV 418 (490)
T ss_pred cccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEecCCceEEEEEEEe
Confidence 0001 111222334445566666677777776 6677776666543 222211 122334555554
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHhh
Q 011669 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITPPLC-FTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~-~t~~~id~~l~~l~~~l~~ 479 (480)
...............+.+.|.+.|-+...... ...++|+++... ++++|++.+++.|.+..++
T Consensus 419 ~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 419 PPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 32111000112234566777776655433221 135799987544 4569999999999887654
No 327
>PRK04311 selenocysteine synthase; Provisional
Probab=99.48 E-value=1.1e-11 Score=127.68 Aligned_cols=338 Identities=15% Similarity=0.123 Sum_probs=186.3
Q ss_pred EEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccc-c---ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHH
Q 011669 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST-V---LYLNHAIADFAEALASKMPGNLKVVFFTNSGT 168 (480)
Q Consensus 93 l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~---~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGs 168 (480)
++...|..|.+-.++ + --++++.+++.+.+....... . ....+....+++.++++++. +.++++|||+
T Consensus 81 vinatg~v~~tNlg~-s-----~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--e~a~vv~sgt 152 (464)
T PRK04311 81 VINATGVVLHTNLGR-A-----LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--EDALVVNNNA 152 (464)
T ss_pred eecCCccEEeccCCC-C-----CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--CeEEEECCHH
Confidence 455556666554432 1 135899999998876542100 0 01123456788999998854 5688999999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcc--cccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYH--GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yh--G~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
.|+..++... .++++||+.++.+. |.+.. +. ......|+....++..-+ .+ .++++++
T Consensus 153 aAl~l~l~~l---~~GdeVIvs~~e~~~~ggs~~-i~--------~~~~~~G~~l~~v~~~~~----t~----~~dle~a 212 (464)
T PRK04311 153 AAVLLALNAL---AAGKEVIVSRGELVEIGGAFR-IP--------DVMRQAGARLVEVGTTNR----TH----LRDYEQA 212 (464)
T ss_pred HHHHHHHHHh---CCCCEEEEcchhhhhcCcchh-hH--------HHHHHCCcEEEEECCCCC----CC----HHHHHHh
Confidence 9999888542 36678888776433 21111 00 001112444333221100 11 5678887
Q ss_pred HHccCCCceEEEEEcccCCC--Cc--ceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC-----CCcccccccCCCc
Q 011669 247 IDFGTSGHVAGFLSESIQGV--GG--IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG-----SHFWGFEAHGVVP 317 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~--~G--~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G-----~~~~~~~~~~~~p 317 (480)
++ +++++|+++...+. .| ...+ +++|.++|++||+++|+|....-++-.+ ......+......
T Consensus 213 I~----~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~Ga 284 (464)
T PRK04311 213 IN----ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGV 284 (464)
T ss_pred cC----ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCC
Confidence 75 36788887776553 34 3334 9999999999999999999432111111 0111111123457
Q ss_pred ceeeec--cccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh--hHH------------HHHHH
Q 011669 318 DIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK--DKL------------QNNAH 381 (480)
Q Consensus 318 Divt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~--~~~------------~~~~~ 381 (480)
|++++| |.++|. ..|++++++++++.+......-.+...-...++-.++|...-+ +.+ .++..
T Consensus 285 Div~fSg~K~LgGp-~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~ 363 (464)
T PRK04311 285 DLVTFSGDKLLGGP-QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELR 363 (464)
T ss_pred cEEEecCcccccCC-ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHH
Confidence 999888 999865 3788999999988776432222333333444444455542211 111 14444
Q ss_pred HHHHHHHHHHHHhHHh-c--Cceee--Eecccee-------EEEEEecCCCcCCCCHHHHHHHHHHHHHc--CceeeccC
Q 011669 382 VVGSYLKERLTALKDK-Y--GIIGD--VRGRGFL-------LGVEFVTDRQLKTPAKAETLYIMDKMKEM--GVLVGKGG 447 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~-~--~~~~~--v~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~l~~~--Gv~v~~~~ 447 (480)
++...+.+.|+..... + .++.. .-|.|.+ +.+.+... ......+.+.|++- .|+.+
T Consensus 364 ~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-------~~~~~~l~~~lr~~~~~i~~r--- 433 (464)
T PRK04311 364 ARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-------DRSLEALAARLRLLPPPVIGR--- 433 (464)
T ss_pred HHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC-------CCCHHHHHHHHhcCCCCEEEE---
Confidence 4555555555443110 0 01100 1122222 22333211 11246677777763 35544
Q ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 448 FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 448 ~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
...+.+.+-+- +..++|++.++++|.+++.
T Consensus 434 ~~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 434 IEDGRLLLDLR-TLEEEDEERLAAALLEALN 463 (464)
T ss_pred EECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence 22456666643 7789999999999998764
No 328
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.48 E-value=7.7e-12 Score=127.54 Aligned_cols=154 Identities=18% Similarity=0.125 Sum_probs=106.1
Q ss_pred ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccC
Q 011669 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ 216 (480)
Q Consensus 137 ~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~ 216 (480)
+..++...+|+++++++.+. +.++.++||+.|+.+++..+. .+++.||+....|.+.....-.. ...
T Consensus 57 R~~nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all--~~GD~VI~~~~~Y~~T~~~~~~~---------l~~ 123 (432)
T PRK06702 57 RIGNPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNIC--SSGDHLLCSSTVYGGTFNLFGVS---------LRK 123 (432)
T ss_pred CCCCcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhc--CCCCEEEECCCchHHHHHHHHHH---------HHH
Confidence 34478999999999999864 457889999999999998553 36789999999996543321110 001
Q ss_pred CCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 217 TGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 217 ~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
.|+....+. +..| .++++++|+ +++++|++|...++.+.+.. +++|.++|++||+++|+|++
T Consensus 124 ~Gi~v~~vd------~~~d----~~~l~~~I~----~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T 185 (432)
T PRK06702 124 LGIDVTFFN------PNLT----ADEIVALAN----DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNT 185 (432)
T ss_pred CCCEEEEEC------CCCC----HHHHHHhCC----cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECC
Confidence 133322211 1112 467888875 36789999988777877766 99999999999999999999
Q ss_pred ccCccccCCCcccccccCCCccee--eecccccc
Q 011669 297 QAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN 328 (480)
Q Consensus 297 ~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~ 328 (480)
+. + +..++......||+ +++|.++|
T Consensus 186 ~~----t---P~~~~pl~~GADIvv~S~TKy~~G 212 (432)
T PRK06702 186 LA----T---PYLCQAFEHGANIIVHSTTKYIDG 212 (432)
T ss_pred CC----c---hhhCChhhcCCCEEEEccccccCC
Confidence 73 2 22233233345555 78898874
No 329
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.47 E-value=2.9e-11 Score=133.79 Aligned_cols=302 Identities=14% Similarity=0.204 Sum_probs=176.0
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc------CCceEEEEcCCcccccccccccccCCCccccc
Q 011669 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~------~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
..+.++.+.|++.++.+ ...+..|+|+.++..+|..+|.+. .+++|++ ..+-|+.........
T Consensus 542 ~~i~e~q~~l~eltG~d-~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vli-s~~aH~snp~sa~~~--------- 610 (954)
T PRK05367 542 ELIDQLEAWLAEITGYD-AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLI-PSSAHGTNPASAVMA--------- 610 (954)
T ss_pred HHHHHHHHHHHHHHCCC-CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEE-EchhhhhhHHHHHHC---------
Confidence 44568888999988654 344556688899988887777642 1233444 455666555443332
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
|+..+.++....+. .| .++|++.++.. ..++++|++......|+...+ +++|.++|+++|+++++|
T Consensus 611 ---G~~vv~v~~d~~G~--iD----~~~L~~~i~~~-~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VD 676 (954)
T PRK05367 611 ---GMKVVVVACDENGN--ID----LDDLRAKAEEH-ADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLD 676 (954)
T ss_pred ---CCEEEEECCCCCCC--cC----HHHHHHHHhcc-CCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEE
Confidence 33333332211111 23 67888888642 235777766554443333345 999999999999999999
Q ss_pred ccccCccccCCCccccccc-CCCcceeeec--cccc-----cCccccccccCHHHHHhhcCCCc--------cccCCCcH
Q 011669 295 EVQAGFARTGSHFWGFEAH-GVVPDIVTMA--KGIG-----NGIPLGAVVTTPEIAEVLTRRNY--------FNTFGGNP 358 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~-~~~pDivt~s--K~~g-----~G~pig~v~~~~~~~~~l~~~~~--------~~t~~~~~ 358 (480)
.++.+ +..+ +... ....|+++++ |.|+ ||-.+|.+.+++.+...+..... .++....+
T Consensus 677 gA~~~-al~~-----l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~ 750 (954)
T PRK05367 677 GANMN-AQVG-----LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAP 750 (954)
T ss_pred CcChh-hccC-----CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHH
Confidence 99952 1112 1111 2346888776 9886 34557888888776655543211 12222223
Q ss_pred H----HHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHhHHhcCceeeE-ecc-ceeEEEEEecCCCcCCCCHHHH
Q 011669 359 V----CTAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTALKDKYGIIGDV-RGR-GFLLGVEFVTDRQLKTPAKAET 429 (480)
Q Consensus 359 ~----~~aaa~a~L~~i~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~v-~g~-g~~~~i~~~~~~~~~~~~~~~~ 429 (480)
. ....++..+..+-.+.+.+..+ .+.+|+.++|++. ++....- .+. -.-+.+++..-+. ......
T Consensus 751 ~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~~~~~~~~---~~g~~~ 824 (954)
T PRK05367 751 FGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECILDLRPLKE---STGITV 824 (954)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEEEeecccc---cCCCCH
Confidence 3 2222333444444566655555 6788888888763 2221110 000 0011223311100 001124
Q ss_pred HHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 430 LYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 430 ~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..+.+.|.+.|+...... ...+.++|+|.-..|++|+|++++++..+.++
T Consensus 825 ~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 825 DDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 679999999999876521 12578999999999999999999999876543
No 330
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.47 E-value=5.7e-11 Score=119.98 Aligned_cols=348 Identities=17% Similarity=0.130 Sum_probs=184.4
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
....|||+.+-.++ +.+.+++...+..+.- ...-++...+|.+.++++++ .+.+++++||+.|+..+..
T Consensus 43 ~~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd--~Yagd~s~~~LE~~vAe~lG--~e~aV~v~sGTaAl~ll~~ 111 (460)
T PRK13237 43 SEDVYIDLLTDSGT-------NAMSDRQWAGMMIGDE--AYAGSRNFYHLEETVQEYYG--FKHVVPTHQGRGAENLLSR 111 (460)
T ss_pred cCcEEEECcccCCc-------hhccHHHHHHHhhcch--hhcCCCcHHHHHHHHHHHHC--CCeEEEeCCHHHHHHHHHH
Confidence 44689999877665 2334443333322211 11236678899999999995 5679999999999998643
Q ss_pred HHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 177 ~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
+ ...+++ +| ..+.+...+...+...+. .+ .+....+.......+++.+. -| +++++++|+.....+++
T Consensus 112 l--~v~pGd-~V-p~n~~f~Tt~ahI~~~Ga-~f-vDi~~d~a~~~~~~~p~tgn--lD----~d~Le~~I~~~~~~~~~ 179 (460)
T PRK13237 112 I--AIKPGQ-YV-PGNMYFTTTRYHQELNGG-IF-VDIIIDEAHDAQSDHPFKGN--VD----LDKLQALIDEVGAENIA 179 (460)
T ss_pred h--CCCCcC-EE-CCccchHhhHHHHHhCCc-EE-EeeecccccccccCCCCCCC--cC----HHHHHHHhccccCCccC
Confidence 2 222344 33 223232222221322221 00 00000000000011122222 23 67899988754344555
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcc-------ccCCCcccccc------cCCCcceeeec
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA-------RTGSHFWGFEA------HGVVPDIVTMA 323 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfg-------r~G~~~~~~~~------~~~~pDivt~s 323 (480)
.+.++-..+..|..+.|.+.+++|+++|++||+.+|.|-++. +| |.. .+++... ..-.-|+++||
T Consensus 180 lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~-~y~~~~i~ei~~e~~s~aD~~t~S 257 (460)
T PRK13237 180 YICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREE-GYQDKSIKEIVHEMFSYADGCTMS 257 (460)
T ss_pred ceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhccccc-ccCCCcHhHHhhhccCcCcEEEEe
Confidence 555554444443345577789999999999999999999886 44 111 1111111 11245888776
Q ss_pred --cccccCccc-cccccC-HHHHHhhcCCC----ccccCCCcHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Q 011669 324 --KGIGNGIPL-GAVVTT-PEIAEVLTRRN----YFNTFGGNPV-CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 324 --K~~g~G~pi-g~v~~~-~~~~~~l~~~~----~~~t~~~~~~-~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l 394 (480)
|.++. ++ |+++.+ +++.+.++... .+.|+++-.- -+.|..-.|+...++++.++.-+..++|.+.|.+.
T Consensus 258 ~~K~~~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 258 GKKDCLV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCCCCCC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC
Confidence 65553 43 455554 67877776541 3346665322 12222222333334466666666677777777664
Q ss_pred HHhcCceeeEeccceeEEEEEecC----CCcCCCCHHHHHHHHHHH-HHcCceeeccCc-------------C--CCEEE
Q 011669 395 KDKYGIIGDVRGRGFLLGVEFVTD----RQLKTPAKAETLYIMDKM-KEMGVLVGKGGF-------------Y--GNVFR 454 (480)
Q Consensus 395 ~~~~~~~~~v~g~g~~~~i~~~~~----~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~-------------~--~~~iR 454 (480)
..|++. +..|.-+.++...- +....| +..+.-.| ++-||--..-|. . -..+|
T Consensus 336 --Gvpv~~--p~ggH~v~vda~~~lph~~~~~~p----~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~r 407 (460)
T PRK13237 336 --GVPIVE--PVGGHAVFLDARRFLPHLPQDQFP----AQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVR 407 (460)
T ss_pred --CCceec--CCCceEEEEEhHHhCCCCCcccCh----HHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceee
Confidence 334332 34455455553221 111122 23333333 344554321110 0 14689
Q ss_pred EeCC-CCCCHHHHHHHHHHHHHHHhh
Q 011669 455 ITPP-LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 455 i~p~-~~~t~~~id~~l~~l~~~l~~ 479 (480)
+..| -..|.+++|.+.++|..+.++
T Consensus 408 laiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 408 LTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred eccccccccHHHHHHHHHHHHHHHHh
Confidence 8877 456999999999999887653
No 331
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.47 E-value=6.5e-12 Score=126.34 Aligned_cols=288 Identities=20% Similarity=0.191 Sum_probs=166.2
Q ss_pred ccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccc
Q 011669 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 133 ~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+...++.++....|.++|+++.++ +.++.++||.-|+.+++..... .++.||+....|+|.....-...
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~--~Gd~iv~~~~~Y~~t~~~~~~~l------- 115 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLK--PGDHIVASDDLYGGTYRLLEELL------- 115 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHHHCH-------
T ss_pred cceeccccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcc--cCCceEecCCccCcchhhhhhhh-------
Confidence 344567789999999999999854 6788999999999999886543 57889999999977433222111
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhC-CEE
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG-GLC 291 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g-ill 291 (480)
+..|+....++. .| .++++++++ +++++|++|++.|+...+.. +++|+++|+++| +++
T Consensus 116 --~~~gv~v~~~d~-------~d----~~~l~~~l~----~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~ 174 (386)
T PF01053_consen 116 --PRFGVEVTFVDP-------TD----LEALEAALR----PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILV 174 (386)
T ss_dssp --HHTTSEEEEEST-------TS----HHHHHHHHC----TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EE
T ss_pred --cccCcEEEEeCc-------hh----HHHHHhhcc----ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceE
Confidence 112444332211 12 578888885 38999999999888877766 999999999998 999
Q ss_pred EEcccccCccccCCCcccccccCCCccee--eecccccc-C-ccccccccCH--HHHHhhcCCCccccCC--CcHHHHHH
Q 011669 292 IADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G-IPLGAVVTTP--EIAEVLTRRNYFNTFG--GNPVCTAA 363 (480)
Q Consensus 292 I~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G-~pig~v~~~~--~~~~~l~~~~~~~t~~--~~~~~~aa 363 (480)
|+|...... +.++......|++ +.+|-++| | .-.|+++.+. ++.+.+.... ..++ .+|..+..
T Consensus 175 vVDnT~atp-------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~l 245 (386)
T PF01053_consen 175 VVDNTFATP-------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWL 245 (386)
T ss_dssp EEECTTTHT-------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHH
T ss_pred Eeeccccce-------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh--hhcCccchHHHHHH
Confidence 999986421 1122222235665 67799985 3 5567777654 6766554321 1122 23444443
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE------------------eccceeEEEEEecCCCcCCCC
Q 011669 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV------------------RGRGFLLGVEFVTDRQLKTPA 425 (480)
Q Consensus 364 a~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v------------------~g~g~~~~i~~~~~~~~~~~~ 425 (480)
.+..|+.+ .-..++..+....+.+ .++++|.+..| .|.|.++.|++...
T Consensus 246 l~rgl~Tl--~~R~~~~~~nA~~lA~----~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~------- 312 (386)
T PF01053_consen 246 LLRGLRTL--PLRMERQNENAEALAE----FLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG------- 312 (386)
T ss_dssp HHHHHTTH--HHHHHHHHHHHHHHHH----HHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH-------
T ss_pred HhcCCCcH--HHHHHHHHHHHHHHHH----HHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc-------
Confidence 33333221 1123333334444444 34445555433 36667889998432
Q ss_pred HHHHHHHHHHHHH--cCceee--------cc---------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 426 KAETLYIMDKMKE--MGVLVG--------KG---------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 426 ~~~~~~~~~~l~~--~Gv~v~--------~~---------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
......+.+.|.= .|.-.+ |. |...+.|||+..+ |+.+.+++-|+++|+
T Consensus 313 ~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 313 EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 1234555555531 111111 10 1113578998554 567777888887764
No 332
>PLN02590 probable tyrosine decarboxylase
Probab=99.47 E-value=3.7e-10 Score=117.91 Aligned_cols=317 Identities=11% Similarity=0.023 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHhCCCCC-------CEEEEeCCHHHHHHHHHHHHHhhcC-------Cce-EEEEcCCcccccccccccc
Q 011669 141 HAIADFAEALASKMPGNL-------KVVFFTNSGTEANELAIMMARLYTG-------CND-IISLRNAYHGNAAGTMGAT 205 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~-------~~v~f~~sGseA~~~Alk~ar~~~~-------~~~-ii~~~~~yhG~~~~~~~~~ 205 (480)
....++.++|+++++.+. ..-+|++||||||..||.+||...- ..+ ++.....-|-+..-+..+.
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il 249 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG 249 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence 445567777777775332 2357899999999999999987421 112 3333443454443333333
Q ss_pred cCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHH
Q 011669 206 AQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKS 283 (480)
Q Consensus 206 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l 283 (480)
+-+ ...+..++.+. ...+.-| .+.|++.|++. ....+.+|+..--....|.+-| |++|.++
T Consensus 250 Glg-------~~~vr~Vp~d~--~~~~~md----~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i 312 (539)
T PLN02590 250 GIH-------EENIRLLKTDS--STNYGMP----PESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNI 312 (539)
T ss_pred CCC-------cccEEEEeCCC--CCCCcCC----HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHH
Confidence 211 11244444331 1111123 56777777531 1224566666666666788877 9999999
Q ss_pred HHHhCCEEEEcccccCccccCCCcccccccCC-Ccceeeec--cccccCccccccccCHH--HHHhhcCCC---------
Q 011669 284 IKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE--IAEVLTRRN--------- 349 (480)
Q Consensus 284 ~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pDivt~s--K~~g~G~pig~v~~~~~--~~~~l~~~~--------- 349 (480)
|++||++|++|-+|.|+...-... ..-..|+ ..|.+++. |.+...+++|.++.+.. +.+.+....
T Consensus 313 ~~~~g~WlHVDaA~GG~al~~~~~-r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 313 AKKYGIWLHVDAAYAGNACICPEY-RKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHHhCCeEEEecchhhhhhcChhh-HHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999998874322111 0112243 36777765 99988899998888753 322221100
Q ss_pred -----ccc--cC-CCcHHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHhHHhcCceeeEecc-ceeEEEEEec
Q 011669 350 -----YFN--TF-GGNPVCTAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTALKDKYGIIGDVRGR-GFLLGVEFVT 417 (480)
Q Consensus 350 -----~~~--t~-~~~~~~~aaa~a~L~~i~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~~v~g~-g~~~~i~~~~ 417 (480)
... +. .+-.+.....+.+|+.+-.+.+.+.++ ++.+++.+.|++ .+.+.-+... =..+.|.+..
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~----~~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ----DPSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCceEEEEEEecC
Confidence 000 11 122455556667777666666555544 445555555544 3332222221 1223344322
Q ss_pred CCCcCCCCHHHHHHHHHHHHHcCceeeccCc-C-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHhh
Q 011669 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-Y-GNVFRITP-PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~-~~~iRi~p-~~~~t~~~id~~l~~l~~~l~~ 479 (480)
..............+.+.+.+.|.+...... . ..+||++. ...++++||+.+++.|.+...+
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1110000122345677888888866543322 1 24789875 3457899999999999887654
No 333
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=3.8e-11 Score=118.79 Aligned_cols=311 Identities=19% Similarity=0.200 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
.+..+++.+.++..+.+. -+...++.++++++++ .+.++.++|||.|+.+|++..- ..+++.||+..-+|-..
T Consensus 15 ~~e~~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~G--~k~ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvAT 87 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG----GPFVRRFEQAFAEYLG--VKYAVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVAT 87 (374)
T ss_pred hHHHHHHHHHHHcCCeec----ChHHHHHHHHHHHHhC--CCeEEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHH
Confidence 466777777777654433 4677899999999994 5788999999999999998443 56788999988888655
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....+..+..+.+ +. .....|+-| .+.+|+.|+ +++++||.-...|.. .. +
T Consensus 88 an~i~~~Ga~PVF-----------vD---id~~T~nid----~~~ie~aIt----~~tKAIipVhl~G~~---~d----m 138 (374)
T COG0399 88 ANAVLLVGAKPVF-----------VD---IDPDTLNID----PDLIEAAIT----PRTKAIIPVHLAGQP---CD----M 138 (374)
T ss_pred HHHHHHcCCeEEE-----------Ee---cCCcccCCC----HHHHHHHcc----cCCeEEEEehhccCC---CC----H
Confidence 5554444433221 11 111122234 678898886 358888877776532 22 8
Q ss_pred HHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec----cccccCccccccccC-HHHHHhhcCCC-c-
Q 011669 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y- 350 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~-~~~~~~l~~~~-~- 350 (480)
++|.++|++||+++|.|.+|+ +|-+ +.-...|-.-|+.+|| |.++.| --|+++++ +++++.++... |
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa-~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG 212 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQA-HGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHG 212 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchh-ccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhC
Confidence 999999999999999999997 5422 1112335556788776 999865 44677776 56666654211 1
Q ss_pred --------------cccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEE--
Q 011669 351 --------------FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE-- 414 (480)
Q Consensus 351 --------------~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~-- 414 (480)
+..+.-+-+.++.+++-|+.+ +++.++-+++.+++.+.|+++.. ........+.-.-+++.
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i 289 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTI 289 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEE
Confidence 122333456666677777654 44556666666666666665521 11111111111111111
Q ss_pred EecCCCcCCCCHHHHHHHHHHHHHcCcee----ecc--------------CcC-------CCEEEEeCCCCCCHHHHHHH
Q 011669 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLV----GKG--------------GFY-------GNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v----~~~--------------~~~-------~~~iRi~p~~~~t~~~id~~ 469 (480)
+..+. ...-+.+.+.|.++||.. .|. +.. ...+.+=..-..+++++++.
T Consensus 290 ~~~~~------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V 363 (374)
T COG0399 290 LVDEE------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRV 363 (374)
T ss_pred EecCC------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHH
Confidence 11111 122467888899996552 331 000 12444433345799999999
Q ss_pred HHHHHHHHhh
Q 011669 470 VDVMDYSLSK 479 (480)
Q Consensus 470 l~~l~~~l~~ 479 (480)
++.|++++.+
T Consensus 364 ~~~l~~~~~~ 373 (374)
T COG0399 364 IEALKEVLGS 373 (374)
T ss_pred HHHHHHHhcc
Confidence 9999998864
No 334
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.46 E-value=1.9e-12 Score=126.68 Aligned_cols=229 Identities=12% Similarity=0.114 Sum_probs=129.6
Q ss_pred cCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCC
Q 011669 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 217 (480)
.+...+.++.+++++.++.+ +.+++++|+++++..++..+. .++++|++.+++|..... .+...+
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~--~~gd~Vlv~~~~h~s~~~-~~~~~g----------- 120 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVC--GPGDKILIDRNCHKSVIN-GLVLSG----------- 120 (294)
T ss_pred CCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcC--CCCCEEEEeCCchHHHHH-HHHHCC-----------
Confidence 34566788888888888643 444459999999999987654 367888888887654332 233322
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 297 (480)
...+.++......|+.......+++++.++.. .++++|++... +..|.+.+ +++|.++|++||+++|+||+|
T Consensus 121 -~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~--~~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~ 192 (294)
T cd00615 121 -AVPVYLKPERNPYYGIAGGIPPETFKKALIEH--PDAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAH 192 (294)
T ss_pred -CEEEEecCccCcccCcCCCCCHHHHHHHHHhC--CCceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcc
Confidence 11111111111111100011167788888642 24555554432 34787766 999999999999999999999
Q ss_pred cCc-cccCCCcccccccCCCccee--eeccccccCccccccc-cCHHH--HHhhcCC-CccccCCCcHHHHHHHHHHHHH
Q 011669 298 AGF-ARTGSHFWGFEAHGVVPDIV--TMAKGIGNGIPLGAVV-TTPEI--AEVLTRR-NYFNTFGGNPVCTAAGHAVLKV 370 (480)
Q Consensus 298 tgf-gr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~pig~v~-~~~~~--~~~l~~~-~~~~t~~~~~~~~aaa~a~L~~ 370 (480)
... ...+ .+ .........|++ +++|.+ +|++.|+++ .+.+. .+.+... ....|.+.+.+.+++..++++.
T Consensus 193 ~~~~~~~~-~~-~~~~~~~~~div~~S~hK~l-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~ 269 (294)
T cd00615 193 GAHFRFHP-IL-PSSAAMAGADIVVQSTHKTL-PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAM 269 (294)
T ss_pred hhhhccCc-cc-CcchhhcCCcEEEEchhccc-chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH
Confidence 642 2222 11 111112245666 567987 455554443 44331 1122211 1223445556666666666666
Q ss_pred hhh--hHHHHHHHHHHHHHHHHHH
Q 011669 371 IQK--DKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 371 i~~--~~~~~~~~~~~~~l~~~L~ 392 (480)
+.. +++.++..++.++++++|.
T Consensus 270 ~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 270 MALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHh
Confidence 543 3456666777777776654
No 335
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=1.3e-11 Score=126.61 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=109.2
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
.++.++...+|+++|+++.+. +..++++||+.|+..++.... .+++.||+....|.+.. ..+.. ...
T Consensus 64 sr~~~p~~~~Le~~lA~l~g~--~~av~~sSG~aAi~~al~all--~~Gd~Vv~~~~~y~~t~-~~~~~--------~l~ 130 (436)
T PRK07812 64 TRIMNPTQDVVEQRIAALEGG--VAALLLASGQAAETFAILNLA--GAGDHIVSSPRLYGGTY-NLFHY--------TLP 130 (436)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHh--CCCCEEEEeCCcchHHH-HHHHH--------Hhh
Confidence 344578888999999999854 557899999999999996543 36778888877764432 21110 001
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+.....++. .| .++++++++ +++++|++|.+.++.|.+.+ +++|.++|++||+++|+|+
T Consensus 131 ~~Gi~v~~vdd~------~d----~e~l~~ai~----~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~ 192 (436)
T PRK07812 131 KLGIEVSFVEDP------DD----LDAWRAAVR----PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDN 192 (436)
T ss_pred cCeEEEEEECCC------CC----HHHHHHhCC----CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEEC
Confidence 124443333211 12 566777664 36889999999999999988 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCccee--eecccccc-Ccccccccc
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVT 337 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig~v~~ 337 (480)
++.. +... .......|++ +++|.+++ |--+|+++.
T Consensus 193 t~a~-~~~~------~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 193 TIAT-PYLI------RPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred CCcc-cccC------CchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 8852 1111 1112235665 67799984 433444444
No 336
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.45 E-value=6.2e-11 Score=128.35 Aligned_cols=298 Identities=13% Similarity=0.162 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHhCCCCCCEE-EEeCCHHHHHHHHHHHHHhh------cCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 141 HAIADFAEALASKMPGNLKVV-FFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v-~f~~sGseA~~~Alk~ar~~------~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
..+.+|.+.|++.++ ++.+ +.-+||+.++.++++..|.| ++|++||+. .+-||........
T Consensus 543 q~i~elq~~l~eLtG--md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp-~saHgtNpasa~~--------- 610 (954)
T PRK12566 543 AMIDELEAWLCAITG--FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIP-SSAHGTNPASAQM--------- 610 (954)
T ss_pred HHHHHHHHHHHHHHC--CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEec-ccccccCHHHHHH---------
Confidence 345688888899985 4433 45569999998899888875 345555554 4666655443222
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
.|+..+.+|....+. .| +++|++.+++. .+++++|++...+..|+...+ +++|.++|+++|+++++
T Consensus 611 ---~GieVv~Vp~D~~G~--iD----le~L~a~I~~~-~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~v 676 (954)
T PRK12566 611 ---AGMRVVIVECDPDGN--VD----LDDLKAKAAAA-GDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYM 676 (954)
T ss_pred ---CCCEEEEeccCCCCC--cC----HHHHHHHhhcc-CCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEE
Confidence 244444443321221 13 78888888743 347888887666555544333 99999999999999999
Q ss_pred cccccCccccCCCcccccc-cCCCcceeeec--cccc-----cCccccccccCHHHHHhhcCCC----------cc---c
Q 011669 294 DEVQAGFARTGSHFWGFEA-HGVVPDIVTMA--KGIG-----NGIPLGAVVTTPEIAEVLTRRN----------YF---N 352 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~-~~~~pDivt~s--K~~g-----~G~pig~v~~~~~~~~~l~~~~----------~~---~ 352 (480)
|-++. .+..+ +.. -+...|+++++ |.++ ||.-+|.+..++++...+.+.. .+ .
T Consensus 677 DgA~~-~a~~~-----l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~ 750 (954)
T PRK12566 677 DGANL-NAQVG-----LARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSA 750 (954)
T ss_pred EeeCh-hhccC-----CCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceee
Confidence 99985 22111 221 23457888776 9886 3455777777876665554311 01 1
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhHHHHHH----HHHHHHHHHHHHHhHHhcCceeeEeccce-e--EEEEEecCCCcCCCC
Q 011669 353 TFGGNPVCTAAGHAVLKVIQKDKLQNNA----HVVGSYLKERLTALKDKYGIIGDVRGRGF-L--LGVEFVTDRQLKTPA 425 (480)
Q Consensus 353 t~~~~~~~~aaa~a~L~~i~~~~~~~~~----~~~~~~l~~~L~~l~~~~~~~~~v~g~g~-~--~~i~~~~~~~~~~~~ 425 (480)
...++.+...+++.-++.+-.+ + .+. ..+..|++++|.+ .++.... ...+. + +.+.+..-+. ..
T Consensus 751 ~~~gsa~~l~~A~~Yi~~lG~e-L-k~aa~~ailnAnYla~rL~~---~~~v~~~-~~~~~~~hEfii~~~~l~~---~~ 821 (954)
T PRK12566 751 APWGSASILPISWMYIAMMGPQ-L-ADASEVAILSANYLANQLGG---AFPVLYR-GRNERVAHECILDLRPLKA---QT 821 (954)
T ss_pred cccchHHHHHHHHHHHHHHCHH-H-HHHHHHHHHHHHHHHHHhHh---hCCCCcC-CCCCCeeeEEEEEcccccc---cc
Confidence 1223333334444444444334 3 222 3466677777765 2333321 11122 1 2233221110 01
Q ss_pred HHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 426 KAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 426 ~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
......+.+.|.+.|+...... +..+.+||+|.-..|++|||+++++|..+.++
T Consensus 822 g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 822 GISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred CCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 1224668888999998875421 12578999999999999999999999887654
No 337
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.42 E-value=1.8e-10 Score=125.54 Aligned_cols=301 Identities=15% Similarity=0.191 Sum_probs=185.0
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc-----CCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
..+.++.++|++.++-+ ..-++.++|+.|..++++.+|.|. ++..++....+-||.........
T Consensus 530 q~i~elq~~l~eltGmd-~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~---------- 598 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFD-AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA---------- 598 (939)
T ss_pred HHHHHHHHHHHHHHCCC-CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC----------
Confidence 45578999999998655 356788999999988888888752 12345555567787765553333
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|+..+.+|....+. -| +++|++.++.. .+++++|++...++. |.+.++ +++|.++|+++|+++++|-
T Consensus 599 --G~~Vv~V~~d~~G~--iD----le~L~~~i~~~-~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 599 --GMQVVPVNCDQDGN--ID----LVDLKNKAEQH-GDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred --CCEEEEeccCCCCC--cC----HHHHHHHHhhc-CCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEe
Confidence 33333333211111 23 68888888743 247888888766554 555422 8999999999999999999
Q ss_pred cccCccccCCCcccccc-cCCCcceeeec--cccc-----cCccccccccCHHHHHhhcCCCcc----------------
Q 011669 296 VQAGFARTGSHFWGFEA-HGVVPDIVTMA--KGIG-----NGIPLGAVVTTPEIAEVLTRRNYF---------------- 351 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~-~~~~pDivt~s--K~~g-----~G~pig~v~~~~~~~~~l~~~~~~---------------- 351 (480)
+|.. +-.+ ... -....|+++++ |+|+ ||-.+|.+.+++++...+......
T Consensus 666 Aq~~-al~~-----l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s 739 (939)
T TIGR00461 666 ANMN-AQVG-----LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVS 739 (939)
T ss_pred cChh-hCCC-----CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccc
Confidence 9853 1111 111 23457898875 9887 567789999998766555422110
Q ss_pred ccCCCcHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHhHHhcCceeeEecccee---EEEEEecCCCcCCCC
Q 011669 352 NTFGGNPVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL---LGVEFVTDRQLKTPA 425 (480)
Q Consensus 352 ~t~~~~~~~~aaa~a~L~~i~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~---~~i~~~~~~~~~~~~ 425 (480)
+.+.++.+....++..|..+-.+.+. +..-.+..|+.++|.+. ++.+... ..+.+ +.+++... +...
T Consensus 740 ~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~~l~~~-~~~~~~hEfv~~~~~~---~~~~ 812 (939)
T TIGR00461 740 AAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YPILFVG-TLKHVAHECILDLRPL---KAKT 812 (939)
T ss_pred ccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---CcccccC-CCCceeEEEEEeccch---hhhc
Confidence 11334445555566666666555543 33444667888887662 3322211 11121 22232110 0001
Q ss_pred HHHHHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 426 KAETLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 426 ~~~~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
.....++.+.|.+.|+...... +-.+.+-|.|.-..|++|||++++++.++-+
T Consensus 813 g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~ 866 (939)
T TIGR00461 813 GIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE 866 (939)
T ss_pred CCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence 1236789999999999865432 1124666777788999999999999976644
No 338
>PLN02263 serine decarboxylase
Probab=99.42 E-value=3.2e-10 Score=115.52 Aligned_cols=288 Identities=18% Similarity=0.084 Sum_probs=173.9
Q ss_pred hHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCC
Q 011669 141 HAIADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~--~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g 218 (480)
....++.++++++++.+.+ .-++|+||||||..||.+||.+.++ .+++..-.-|-...-+..+.+- +
T Consensus 133 ~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi----------~ 201 (470)
T PLN02263 133 QFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRM----------E 201 (470)
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCC----------c
Confidence 4456777888888865432 3589999999999999999986443 3455544555444433333221 2
Q ss_pred eeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCC-----EEEE
Q 011669 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGG-----LCIA 293 (480)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gi-----llI~ 293 (480)
+..++... . +.-| .++|++.|++.. ..+.+|++.--..+.|.+-| +++|.++|++||+ +|++
T Consensus 202 ~~~Vp~d~--~--g~mD----~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHV 268 (470)
T PLN02263 202 CVKVDTLV--S--GEID----CADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHC 268 (470)
T ss_pred ceEeccCC--C--CcCc----HHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEE
Confidence 23333221 1 1123 678888886532 24566666655556788877 9999999999997 9999
Q ss_pred cccccCcccc---CCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCCCc-----cccCCCc--HHHH
Q 011669 294 DEVQAGFART---GSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNY-----FNTFGGN--PVCT 361 (480)
Q Consensus 294 DEv~tgfgr~---G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~-----~~t~~~~--~~~~ 361 (480)
|-++.|+-.. ..+.+.+ ....|.++++ |.++..++.|.++.+.+..+.+..... -.|..++ ....
T Consensus 269 DAA~GG~~lPf~~~~~~~df---~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~a 345 (470)
T PLN02263 269 DGALFGLMMPFVKRAPKVTF---KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 345 (470)
T ss_pred eccchhhHhhhcccccccCC---CcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHH
Confidence 9999886320 0011111 1236777766 988888999999999776554432210 1233222 2234
Q ss_pred HHHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHH
Q 011669 362 AAGHAVLKVIQKDKLQNNA---HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKE 438 (480)
Q Consensus 362 aaa~a~L~~i~~~~~~~~~---~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 438 (480)
+..+++|+.+-.+++.+.+ .++.+++.++|++. +...-.....+.+.+. . |.. .+..
T Consensus 346 l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~V~f~--~------p~~--------~~~~ 405 (470)
T PLN02263 346 IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSSTVVFE--R------PKD--------EEFV 405 (470)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceEEEEe--c------Cch--------HHhh
Confidence 5566777766666555444 44556666666654 3322233333333332 1 111 1134
Q ss_pred cCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 439 MGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 439 ~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
+|..+... ++.++|.....++++.+|++++.|++..+
T Consensus 406 ~gW~L~~~---~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 406 RRWQLACQ---GNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cceEEccC---CCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 67766653 35577776666789999999999987654
No 339
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.42 E-value=4e-11 Score=121.00 Aligned_cols=306 Identities=20% Similarity=0.208 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
.+..+++.+.++..+.+. ..+...+|.++++++++ .+.++.++|||.|+.+|++.. ...++++||+..-+|.+.
T Consensus 5 ~e~~~~v~~~l~s~~~~~---~g~~~~~fE~~~a~~~g--~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~ 78 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST---YGPYVEEFEKEFAEYFG--VKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPAT 78 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS---SSHHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THH
T ss_pred HHHHHHHHHHHHhCCccC---CCHHHHHHHHHHHHHhC--CCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHH
Confidence 456677777776653221 15788999999999995 578999999999999999974 445788999998888766
Q ss_pred cccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChH
Q 011669 198 AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYL 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l 277 (480)
....+.....+ +.++. -...+.-| .+++++.++. ++++|++-...|.. .. +
T Consensus 79 ~~ai~~~G~~p-------------v~~Di-~~~~~~id----~~~~~~~i~~----~t~ai~~~h~~G~~---~d----~ 129 (363)
T PF01041_consen 79 ASAILWAGAEP-------------VFVDI-DPETLNID----PEALEKAITP----KTKAILVVHLFGNP---AD----M 129 (363)
T ss_dssp HHHHHHTT-EE-------------EEE-B-ETTTSSB-----HHHHHHHHHT----TEEEEEEE-GGGB----------H
T ss_pred HHHHHHhccEE-------------EEEec-cCCcCCcC----HHHHHHHhcc----CccEEEEecCCCCc---cc----H
Confidence 65555543322 21111 01122233 6788988873 67888887776532 23 8
Q ss_pred HHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec----cccccCccccccccC-HHHHHhhcCC---C
Q 011669 278 PAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA----KGIGNGIPLGAVVTT-PEIAEVLTRR---N 349 (480)
Q Consensus 278 ~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s----K~~g~G~pig~v~~~-~~~~~~l~~~---~ 349 (480)
++|.++|++||+++|.|-+|+ +|-. +.-...|-.-|+.+|| |.+..|- -|+|+++ +++.+.+... .
T Consensus 130 ~~i~~~~~~~~i~lIeD~a~a-~g~~----~~g~~~G~~gd~~~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g 203 (363)
T PF01041_consen 130 DAIRAIARKHGIPLIEDAAQA-FGAR----YKGRPVGSFGDIAIFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHG 203 (363)
T ss_dssp HHHHHHHHHTT-EEEEE-TTT-TT-E----ETTEETTSSSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHcCCcEEEccccc-cCce----eCCEeccCCCCceEecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccC
Confidence 999999999999999999997 4321 1112234445888776 9987442 2667776 5565555321 1
Q ss_pred --------------ccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceeeE---ecc--cee
Q 011669 350 --------------YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV---RGR--GFL 410 (480)
Q Consensus 350 --------------~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v---~g~--g~~ 410 (480)
.+..+..+.+..+.+++.|+.+ +...++-+++.+++++.|..+ +.+... .+. ..+
T Consensus 204 ~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~----~~~~~~~~~~~~~~~~~ 277 (363)
T PF01041_consen 204 RSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGI----PGIKPPPIPDGAERSSY 277 (363)
T ss_dssp EETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTG----TTEEEEGCGTTTEEBCE
T ss_pred cCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcC----CCccccccccccccccc
Confidence 1233456688888888877754 334445555556666665554 322111 111 122
Q ss_pred EEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc--------C------------------CCEEEEeCCCCCCHH
Q 011669 411 LGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF--------Y------------------GNVFRITPPLCFTKE 464 (480)
Q Consensus 411 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------~------------------~~~iRi~p~~~~t~~ 464 (480)
+.+.+.-+... . ...+.+.+.|.++||-+.+... + ...|.+-.....+++
T Consensus 278 ~~f~i~~~~~~--~--~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~e 353 (363)
T PF01041_consen 278 YRFPIRLPDEA--L--ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEE 353 (363)
T ss_dssp SSEEEEETCCG--C--STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHH
T ss_pred ccccccccccc--c--chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHH
Confidence 22222222110 0 1256789999999999876421 0 023444444557899
Q ss_pred HHHHHHHHHH
Q 011669 465 DADYLVDVMD 474 (480)
Q Consensus 465 ~id~~l~~l~ 474 (480)
|++..+++|+
T Consensus 354 dv~~I~~~ir 363 (363)
T PF01041_consen 354 DVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhhccC
Confidence 9999988874
No 340
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.41 E-value=4.6e-11 Score=109.35 Aligned_cols=303 Identities=18% Similarity=0.234 Sum_probs=186.1
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCe
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~ 219 (480)
.+.+.++-+.|++++ +.+.+.+|++.-||-.++|.... +..+.++.++.-|-.+..+.-..+.
T Consensus 60 kPpI~~F~~dlaeFl--g~D~~R~t~GARe~KfavMhal~---~~gd~vV~D~~aHYttyvAAEragl------------ 122 (382)
T COG1103 60 KPPIKDFLEDLAEFL--GMDEVRVTAGAREAKFAVMHALC---KEGDWVVVDSLAHYTTYVAAERAGL------------ 122 (382)
T ss_pred CCcHHHHHHHHHHHh--CCceeeecccchhhHHHHHHHhc---cCCCEEEEcCcchHHHHHHHHhcCC------------
Confidence 567888999999999 56889999999999988876443 4566777788777665544333221
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG 299 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg 299 (480)
....+|..-...|..+.+.|.+-+++..+.. .+.++..++..+.++.|.+.. .+++.++|+++|++++..-+|+
T Consensus 123 ~v~eVp~tg~Pey~i~~e~y~~viee~~~~~-g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt- 196 (382)
T COG1103 123 NVAEVPNTGYPEYKITPEGYAEVIEEVKDEG-GDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT- 196 (382)
T ss_pred eEEecCCCCCCceEecHHHHHHHHHHHHhcc-CCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-
Confidence 1112221111122235555666777766643 346888888889999998866 8999999999999999999998
Q ss_pred ccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCCC-----------ccccCCCcHHHHHHHH-
Q 011669 300 FARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRN-----------YFNTFGGNPVCTAAGH- 365 (480)
Q Consensus 300 fgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~~-----------~~~t~~~~~~~~aaa~- 365 (480)
.||.. .....+.+|+++-| |++++.-|+|.+..++|..+.+-..+ .+-|..|-|+....|.
T Consensus 197 ~Grmp-----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASf 271 (382)
T COG1103 197 VGRMP-----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASF 271 (382)
T ss_pred ecccc-----ccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcC
Confidence 67654 34456789998876 99997779999999999887654322 1223334454433322
Q ss_pred -HHHHHhhhhHHHHHHHHHHHHHHHHHHHhH--HhcCceeeEeccce-eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCc
Q 011669 366 -AVLKVIQKDKLQNNAHVVGSYLKERLTALK--DKYGIIGDVRGRGF-LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGV 441 (480)
Q Consensus 366 -a~L~~i~~~~~~~~~~~~~~~l~~~L~~l~--~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 441 (480)
.+.+.+ ..|.+.+ +...++.+.|+++. .+++ .++.-. ++.++...-..-....+...-.+.+.|+++||
T Consensus 272 P~V~eRV--krWdeEv-~kaR~fv~elEkigg~~qlG----~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI 344 (382)
T COG1103 272 PHVVERV--KRWDEEV-EKARWFVAELEKIGGVKQLG----ERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGI 344 (382)
T ss_pred HHHHHHH--HHHHHHH-HHHHHHHHHHHHhhhHHHhC----CCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCc
Confidence 222222 2233333 33456777777663 1111 111110 11222100000000000011236778899998
Q ss_pred eeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 442 LVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 442 ~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.-...|. ..++.++. +..+.|+++..++++++++++
T Consensus 345 ~GI~~G~-Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 345 HGIQPGQ-TKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cccccCc-eeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 7433222 34566663 578999999999999998864
No 341
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.38 E-value=5.9e-11 Score=121.70 Aligned_cols=164 Identities=20% Similarity=0.221 Sum_probs=108.4
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
..+.++...+++++|++..+. +..++++||++|+.+++.... .++++||+....|.+........ ..
T Consensus 64 ~r~~~pt~~~le~~la~l~g~--~~~v~fsSG~~Ai~~al~~ll--~~Gd~VI~~~~~y~~t~~~~~~~---------l~ 130 (437)
T PRK05613 64 SRLTNPTVEALENRIASLEGG--VHAVAFASGQAAETAAILNLA--GAGDHIVTSPRLYGGTETLFLVT---------LN 130 (437)
T ss_pred eCccChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhc--CCCCEEEECCCccHHHHHHHHHH---------HH
Confidence 445688899999999999864 567788999999998887543 35678888877776542211110 01
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+....++++ .| .+++++.++ +++++|++|...++.|.+.+ +++|.++|+++|+++|+|.
T Consensus 131 ~~Gi~v~~vd~~------~d----~e~l~~~l~----~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~ 192 (437)
T PRK05613 131 RLGIEVTFVENP------DD----PESWQAAVQ----PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDN 192 (437)
T ss_pred hcCeEEEEECCC------CC----HHHHHHhCC----ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEEC
Confidence 124443333211 12 467777775 35788889887777777777 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCcceeee--cccccc-Ccccccccc
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGN-GIPLGAVVT 337 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDivt~--sK~~g~-G~pig~v~~ 337 (480)
++. .+. . +.......|++++ .|.++| |--+|.+++
T Consensus 193 t~a-~g~----~--~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 193 TIA-TAA----L--VRPLELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred CCc-ccc----c--cChHHhCCCEEEeeccceecCCCcceeEEEE
Confidence 985 221 1 1111223577755 498886 544454443
No 342
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.38 E-value=2e-10 Score=117.95 Aligned_cols=333 Identities=16% Similarity=0.169 Sum_probs=178.8
Q ss_pred EEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccc---c-cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHH
Q 011669 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS---T-VLYLNHAIADFAEALASKMPGNLKVVFFTNSGT 168 (480)
Q Consensus 93 l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~---~-~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGs 168 (480)
++...|..|.+-.+. + .-+++|.+|+.+.+...... . ..........+++.|+++++. +..++++||+
T Consensus 76 vinatg~v~~tNlg~-s-----~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~ga--e~alvv~sg~ 147 (454)
T TIGR00474 76 VINATGVVLHTNLGR-A-----PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGA--EDALVVNNNA 147 (454)
T ss_pred eeCCCCcEEeccCCC-C-----CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCC--CcEEEECCHH
Confidence 344556555554322 1 34699999999988754210 0 001124457888999999864 3467889999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcc--cccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYH--GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yh--G~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~ 246 (480)
.|+.+++.. ..++++||+.++.+. |.+..... .....|+....++..-. .+ .++++++
T Consensus 148 aAi~l~l~~---l~~GdeVIvs~~e~v~~ggs~~i~~---------~~~~~G~~~~~v~~~~~----~~----l~dle~a 207 (454)
T TIGR00474 148 AAVLLALNT---LAKGKEVIVSRGELVEIGGSFRIPD---------VMEQSGAKLVEVGTTNR----TH----LKDYEDA 207 (454)
T ss_pred HHHHHHHHH---hCCcCEEEECCChhhhhcchhhHHH---------HHHHcCCEEEEeCCCCC----CC----HHHHHHh
Confidence 999888853 236778888776641 21111000 00112444433321100 12 5677777
Q ss_pred HHccCCCceEEEEEcccCCC--Cc--ceeCCCChHHHHHHHHHHhCCEEEEcccccCccccC-----CCcccccccCCCc
Q 011669 247 IDFGTSGHVAGFLSESIQGV--GG--IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG-----SHFWGFEAHGVVP 317 (480)
Q Consensus 247 i~~~~~~~~a~vi~epi~~~--~G--~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G-----~~~~~~~~~~~~p 317 (480)
++ +++++|+++...+. .| .+.+ +++|.++|++||+++|+|....-++..+ ......+......
T Consensus 208 I~----~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~Ga 279 (454)
T TIGR00474 208 IT----ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGV 279 (454)
T ss_pred cC----cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCC
Confidence 74 36788777776543 35 2445 9999999999999999996421111111 0111112223457
Q ss_pred ceeeec--cccccCccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh-h-HH------------HHHHH
Q 011669 318 DIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK-D-KL------------QNNAH 381 (480)
Q Consensus 318 Divt~s--K~~g~G~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~-~-~~------------~~~~~ 381 (480)
|++++| |.++|. ..|++++++++++.+......-.+...-+..++..++|...-. + .+ .++..
T Consensus 280 Div~fSg~K~LgGp-~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~ 358 (454)
T TIGR00474 280 DLVTFSGDKLLGGP-QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELR 358 (454)
T ss_pred CEEEecCccccCCC-eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHH
Confidence 999998 999765 3688999998887665422211122222333344444433211 1 11 12444
Q ss_pred HHHHHHHHHHHHhHH-hc--Cceee--Eecccee-------EEEEEecCCCcCCCCHHHHHHHHHHHHHcC--ceeeccC
Q 011669 382 VVGSYLKERLTALKD-KY--GIIGD--VRGRGFL-------LGVEFVTDRQLKTPAKAETLYIMDKMKEMG--VLVGKGG 447 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~-~~--~~~~~--v~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~v~~~~ 447 (480)
+....+.+.|++... .+ .++.. .-|.|.| +.+.+... ......+.+.|++.. |+.+
T Consensus 359 ~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~-------~~~~~~l~~~lr~~~~~ii~r--- 428 (454)
T TIGR00474 359 ARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPD-------GLSAEKLEARLRELPPPIIGR--- 428 (454)
T ss_pred HHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-------CCCHHHHHHHHhcCCCCEEEE---
Confidence 455555555555311 00 01110 1122222 23333211 112466777777654 4443
Q ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 448 FYGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 448 ~~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
...+.+.+-+- +..++|++.++++|
T Consensus 429 ~~~~~~~ld~r-~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 429 IEDDRFLLDLR-TLLEDEEELLIEAL 453 (454)
T ss_pred EECCEEEEEeC-cCCHHHHHHHHHHh
Confidence 22456666643 67888988888776
No 343
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.37 E-value=9.5e-11 Score=118.21 Aligned_cols=284 Identities=19% Similarity=0.167 Sum_probs=165.0
Q ss_pred ccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccc
Q 011669 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 135 ~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
+.++.++...+|.++++++.+. +.++.++||+.|+.+++.... .++++||+....|.+........ .
T Consensus 58 Y~r~~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all--~~GD~Vl~~~~~yg~t~~~~~~~---------~ 124 (384)
T PRK06434 58 YTRWGNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLI--KKGKRILSISDLYGQTFYFFNKV---------L 124 (384)
T ss_pred eeCCCChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHh--CCCCEEEEecCccchHHHHHHHH---------H
Confidence 3455688999999999999854 567899999999999998653 36788888776664433222111 1
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
...|+....++.. + .+.++ ++ ++++++|++|.+.++++.+.+ +++|.++|++++ +++|
T Consensus 125 ~~~Gi~v~fvd~~-------~----~~~~~--l~---~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD 182 (384)
T PRK06434 125 KTLGIHVDYIDTD-------R----LNSLD--FD---PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVD 182 (384)
T ss_pred HhcCcEEEEECCC-------C----hhhee--ec---CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEE
Confidence 1124333322210 1 01121 22 346889999999888887766 999999999998 4569
Q ss_pred ccccCccccCCCcccccccCCCcceeeec--ccccc-C-cccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGN-G-IPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~-G-~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~ 369 (480)
.++. -... ....+...|++++| |.++| | .=.|.++. ++++.+.+...........+|+.++.++..|+
T Consensus 183 ~t~~-s~~~------~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~ 255 (384)
T PRK06434 183 ATFA-SPYN------QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLK 255 (384)
T ss_pred CCCC-Cccc------CCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCC
Confidence 9963 1111 22234557888765 99975 3 33456656 45666655422111223345776666665554
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHH
Q 011669 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMK 437 (480)
Q Consensus 370 ~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 437 (480)
.+ +...++..++...+.+.|+. +|.+.. .+|.|.|+.|++.. ...+.++.+.|.
T Consensus 256 tL--~~R~~r~~~~a~~~a~~L~~----~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--------~~~~~~f~~~l~ 321 (384)
T PRK06434 256 TL--GLRMEKHNKNGMELARFLRD----SKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--------MEDVHKFIRNLE 321 (384)
T ss_pred cH--HHHHHHHHHHHHHHHHHHHc----CCCccEEECCChHHHHHhcCCCCceEEEEECC--------HHHHHHHHHhCC
Confidence 33 23344455555555555543 444322 24668888888842 122344544443
Q ss_pred H--cCceeec--------c---------------CcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 438 E--MGVLVGK--------G---------------GFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 438 ~--~Gv~v~~--------~---------------~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
= .++-.+. . |...+.|||+..+ |+++.+++-|+++|.
T Consensus 322 l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 322 IPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred cceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1 1211110 0 1113578998554 567777777777765
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.34 E-value=3.3e-10 Score=118.41 Aligned_cols=288 Identities=17% Similarity=0.129 Sum_probs=156.1
Q ss_pred EEEeCCHHHHHHHHHHHHHhhcC-----------------------CceEEEEcCCcccccccccccccCCCccccccCC
Q 011669 161 VFFTNSGTEANELAIMMARLYTG-----------------------CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (480)
Q Consensus 161 v~f~~sGseA~~~Alk~ar~~~~-----------------------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 217 (480)
-.|++|||+||..||..||...- .+.+|+....-|-...-+....+.+ ..
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg-------~~ 234 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIG-------RD 234 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCC-------cc
Confidence 47899999999999999987521 1123444444444433222222110 01
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
.+..++.... + .-| .++|++.|++. ....+.+|+......++|.+.| +++|.++|++||+++++|-
T Consensus 235 ~v~~vp~d~~--g--~~d----~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDa 302 (522)
T TIGR03799 235 NLIAIKTDAN--N--RID----VDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDA 302 (522)
T ss_pred cEEEEEeCCC--C--cCC----HHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEc
Confidence 2333433211 1 123 56777777531 1123444444445557899988 9999999999999999999
Q ss_pred cccCccccCCCcccccccCC-Ccceeeec--cccccCccccccccC-HHHHHhhcCCC-c-----c-----ccCCCc-HH
Q 011669 296 VQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTT-PEIAEVLTRRN-Y-----F-----NTFGGN-PV 359 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~-~pDivt~s--K~~g~G~pig~v~~~-~~~~~~l~~~~-~-----~-----~t~~~~-~~ 359 (480)
+|.|....- .-+.....++ ..|.++++ |.+.+.+.+|+++.+ ++..+.+.... + . .++.+. +.
T Consensus 303 A~gg~~~~~-~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~ 381 (522)
T TIGR03799 303 AWGGATLLS-NTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPG 381 (522)
T ss_pred hhhhHHHhC-HHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcch
Confidence 997642111 0000112344 67999887 888887888998876 45555443310 0 0 122222 22
Q ss_pred HHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeEe-ccceeEEEEEecCCCcC-----C-----C-
Q 011669 360 CTAAGHAVLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVR-GRGFLLGVEFVTDRQLK-----T-----P- 424 (480)
Q Consensus 360 ~~aaa~a~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~-g~g~~~~i~~~~~~~~~-----~-----~- 424 (480)
......++|+.+..+. +.++..++.+++.+.|++. +.+.-+. ..-..+.+.+....... . .
T Consensus 382 ~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~----~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~ 457 (522)
T TIGR03799 382 MAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ----PDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKI 457 (522)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEEecCCCccEEEEEEeChhhcccccccchhhhhhH
Confidence 2234567777765543 4455556666666666543 3222221 11223344443221100 0 0
Q ss_pred ---CHHHHHHHHHHHHHcCceeeccCc-----C----CCEEEEeC-CCCCCHHHHHHHHHH
Q 011669 425 ---AKAETLYIMDKMKEMGVLVGKGGF-----Y----GNVFRITP-PLCFTKEDADYLVDV 472 (480)
Q Consensus 425 ---~~~~~~~~~~~l~~~Gv~v~~~~~-----~----~~~iRi~p-~~~~t~~~id~~l~~ 472 (480)
.......+.+.+.+.|........ + ..++|++. ...+|+++|+.+++.
T Consensus 458 ~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 458 NELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 011234577777888866543211 1 13689865 345788999987764
No 345
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.32 E-value=4.6e-10 Score=107.62 Aligned_cols=174 Identities=21% Similarity=0.236 Sum_probs=124.2
Q ss_pred HHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC
Q 011669 128 IKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 207 (480)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~ 207 (480)
++..++...+..+|....|.++|+.+-++ .. .+.+.||..|+..|+..... .++.||+...-| |.+...+..+
T Consensus 49 l~~~G~iYsRi~NPT~~vlE~RiAaLEGG-~a-a~a~aSG~AA~~~ai~~la~--aGD~iVss~~LY-GGT~~lf~~t-- 121 (426)
T COG2873 49 LKEPGNIYTRIMNPTTDVLEERIAALEGG-VA-ALAVASGQAAITYAILNLAG--AGDNIVSSSKLY-GGTYNLFSHT-- 121 (426)
T ss_pred CCcCCceeeeccCchHHHHHHHHHHhhcc-hh-hhhhccchHHHHHHHHHhcc--CCCeeEeecccc-CchHHHHHHH--
Confidence 44445555667799999999999998754 33 45789999999999975433 678888877777 4444444333
Q ss_pred CCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh
Q 011669 208 SNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA 287 (480)
Q Consensus 208 ~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~ 287 (480)
++..|+....+.. .| .+.+++.|+ +++++|++|.+-|+++.++. +++|.++|++|
T Consensus 122 ------l~~~Gi~v~fvd~-------~d----~~~~~~aI~----~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~ 176 (426)
T COG2873 122 ------LKRLGIEVRFVDP-------DD----PENFEAAID----ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRH 176 (426)
T ss_pred ------HHhcCcEEEEeCC-------CC----HHHHHHHhC----cccceEEEEeccCCCccccC----HHHHHHHHHHc
Confidence 2223544332211 12 578888886 48999999999999998877 99999999999
Q ss_pred CCEEEEcccccCccccCCCcccccccCCCccee--eecccccc-CccccccccCHH
Q 011669 288 GGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-GIPLGAVVTTPE 340 (480)
Q Consensus 288 gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~-G~pig~v~~~~~ 340 (480)
|+++|+|...+. .|-+...+...||| +.+|.+|| |--||.+++...
T Consensus 177 gvpliVDNT~at-------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G 225 (426)
T COG2873 177 GVPLIVDNTFAT-------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGG 225 (426)
T ss_pred CCcEEEecCCCc-------ceecchhhcCCCEEEEeecccccCCccccceEEEeCC
Confidence 999999997652 22233334456777 67899996 888888776543
No 346
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.2e-09 Score=104.91 Aligned_cols=313 Identities=15% Similarity=0.135 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhccccccccC-----ChHHHHHHHHHHHh--CCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEE
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYL-----NHAIADFAEALASK--MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL 190 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~-----~~~~~~l~e~L~~~--~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~ 190 (480)
..+++-...-+...+-+...|. .-.+...|+-|.++ .|.+.+.|++|.+.|.|+...|++.... .++.|++.
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-~~~GvliP 167 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-KKTGVLIP 167 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-CCCceEee
Confidence 4455555555555432222332 33445555555555 3566789999999999999999987653 67789999
Q ss_pred cCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcce
Q 011669 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGII 270 (480)
Q Consensus 191 ~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~ 270 (480)
-+-|.-++... ++. |...+++=......|+.|.+.+...++++.+. -+..++|+++|-|++| .+
T Consensus 168 iPQYPLYsAti-~l~------------~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~--i~~r~lvvINPGNPTG-qv 231 (475)
T KOG0258|consen 168 IPQYPLYSATI-SLL------------GGTQVPYYLDEESNWSLDVAELERSVDEARKG--INPRALVVINPGNPTG-QV 231 (475)
T ss_pred cCCCchhHHHH-HHh------------CCcccceeeccccCCCCCHHHHHHHHHHHhcc--CCceEEEEECCCCccc-hh
Confidence 99886554332 222 12222222233456777744433334444422 2356788899887655 44
Q ss_pred eCCCChHHHHHHHHHHhCCEEEEcccccCccc-cCCCcccccc----cC-CCcce---e---eecccccc--Cccccccc
Q 011669 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR-TGSHFWGFEA----HG-VVPDI---V---TMAKGIGN--GIPLGAVV 336 (480)
Q Consensus 271 ~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr-~G~~~~~~~~----~~-~~pDi---v---t~sK~~g~--G~pig~v~ 336 (480)
.+++-+++|...|.++|++|+.||||..--+ .+++++++.. .+ -.+|- + +.||++.+ |.|-|++=
T Consensus 232 -ls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 232 -LSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred -hcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 4889999999999999999999999876433 3445665531 12 23432 2 45899874 78888754
Q ss_pred ---cCHHHHHhhcCCCccccCCCcHHHHHHHHH----------HHH--HhhhhHHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 337 ---TTPEIAEVLTRRNYFNTFGGNPVCTAAGHA----------VLK--VIQKDKLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 337 ---~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a----------~L~--~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
.++++.+.+.+... ...+.+-.+++..-. ..+ .-+.+.+.+.++...+.+.+.++.+ +.+
T Consensus 311 v~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~----~gi 385 (475)
T KOG0258|consen 311 SLNRDPRVKQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL----EGI 385 (475)
T ss_pred cccCChhHHHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc----Cce
Confidence 23455444332100 000000001110000 000 0123445555555555555555544 667
Q ss_pred eeEeccceeEEEEEecCCC---------cCCCCHHHHHHHHHHHHHcCceeeccCcCCC-----EEEEe
Q 011669 402 GDVRGRGFLLGVEFVTDRQ---------LKTPAKAETLYIMDKMKEMGVLVGKGGFYGN-----VFRIT 456 (480)
Q Consensus 402 ~~v~g~g~~~~i~~~~~~~---------~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~-----~iRi~ 456 (480)
..-+..|.|+.+.-..-+. ...|+ .--..+.|..-||.+.||..|++ ++|.+
T Consensus 386 ~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD---~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~T 451 (475)
T KOG0258|consen 386 SCNPVQGAMYLFPQISLPPKAIEAAKALGIAPD---EFYCLKLLEATGICVVPGSGFGQKEGTYHFRTT 451 (475)
T ss_pred eeccCccceeecccccCCHHHHHHHHHhCCCCc---HHHHHHHHHhcCeEEecCCCCCCCCceeEEEEe
Confidence 7788889998765432110 01111 11233445567999999866552 57765
No 347
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.28 E-value=6.9e-10 Score=111.28 Aligned_cols=316 Identities=16% Similarity=0.122 Sum_probs=175.6
Q ss_pred CHH-HHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCC
Q 011669 117 HPY-VVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193 (480)
Q Consensus 117 ~p~-v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~ 193 (480)
+|. .++|+.+++-...|.+..+ .....+..+.|.+++.. +.+.++++.|||.++|+++..... .+++++++. +
T Consensus 15 ~~~~~~~~~~~~~~~~~HRs~~F-~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-~~g~~vLv~-g- 90 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRSHRSKLG-KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-CRGVDVLAW-E- 90 (374)
T ss_pred CchhhHHHHhhhhcccCcCCHHH-HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-CCCCeEEEE-C-
Confidence 466 6666666554444544332 35566777888888763 345677799999999999986542 145567763 3
Q ss_pred ccccccc-cccc-ccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCccee
Q 011669 194 YHGNAAG-TMGA-TAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIE 271 (480)
Q Consensus 194 yhG~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~ 271 (480)
+.|.... -+.- .+.+ .+..+. .++.... + .++++. ...+. +-..-.++|+..
T Consensus 91 ~FG~r~~~eia~~~g~~---------~v~~l~--~~~g~~~--~----~~~ve~------~~~v~---~vhnETSTGv~n 144 (374)
T TIGR01365 91 SFGKGWVTDVTKQLKLP---------DVRVLE--AEYGKLP--D----LKKVDF------KNDVV---FTWNGTTSGVRV 144 (374)
T ss_pred HHHHHHHHHHHHhcCCC---------CcEEEc--CCCCCCC--C----HHHcCC------CCCEE---EecCCCchheec
Confidence 4454422 1111 1100 011221 1122111 1 344431 12333 333334567766
Q ss_pred CCCChHHHHHHHHHH-hCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhcCC
Q 011669 272 LAPGYLPAVYKSIKK-AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLTRR 348 (480)
Q Consensus 272 ~~~~~l~~l~~l~~~-~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~~~ 348 (480)
+ +++ ++++ +++++|+|-|-+ || + ..+.++ + .|++..| |+|++--.++.++.+++.++.....
T Consensus 145 p----v~~---i~~~~~~~lliVDavSs-~g--~-~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~ 209 (374)
T TIGR01365 145 P----NGD---FIPADREGLTICDATSA-AF--A-QDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESY 209 (374)
T ss_pred c----ccc---cccccCCCcEEEEccch-hc--C-CCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhc
Confidence 5 443 3333 589999999865 54 2 222233 3 6776554 9999544568889998877654421
Q ss_pred -------C---------------ccccCCCc-HHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhHHhcCce
Q 011669 349 -------N---------------YFNTFGGN-PVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLTALKDKYGII 401 (480)
Q Consensus 349 -------~---------------~~~t~~~~-~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~ 401 (480)
. ...|...+ ..+..+...+|+.+.++ +..++.+++.+.+++.++++-- +...
T Consensus 210 ~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~-l~~~ 288 (374)
T TIGR01365 210 TPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNW-IHFL 288 (374)
T ss_pred CCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCC-cccC
Confidence 0 02233333 34555556667666553 3455566667777777776520 1111
Q ss_pred e---eEeccceeEEEEEecCCC---cCCCCHHHHHHHHHHHHHcCceeeccCc--CCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 402 G---DVRGRGFLLGVEFVTDRQ---LKTPAKAETLYIMDKMKEMGVLVGKGGF--YGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 402 ~---~v~g~g~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
. ..+.. ....+.+..+.. ...|.-.....+.+.|+++|+.+.+|.. .++.+||...-.++.+||+.+++.|
T Consensus 289 ~~~~~~rS~-tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l 367 (374)
T TIGR01365 289 AETPEIRSN-TSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWL 367 (374)
T ss_pred CCChhhcCC-CeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHH
Confidence 1 12221 223343311100 0001111146788899999999887632 2478999988889999999999999
Q ss_pred HHHHhh
Q 011669 474 DYSLSK 479 (480)
Q Consensus 474 ~~~l~~ 479 (480)
+-+.+.
T Consensus 368 ~~~~~~ 373 (374)
T TIGR01365 368 DWAFAL 373 (374)
T ss_pred HHHHhc
Confidence 977654
No 348
>PLN02452 phosphoserine transaminase
Probab=99.26 E-value=2.1e-09 Score=107.77 Aligned_cols=325 Identities=11% Similarity=0.043 Sum_probs=192.1
Q ss_pred EEeccCCcccccCCCCCHHHHHHHHHHHHh----------ccccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHH
Q 011669 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKR----------IQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGT 168 (480)
Q Consensus 101 ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~----------~~~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGs 168 (480)
.+-|..|-.. -+++|.+++.+.+-+ ..|....| .....+..+.|.+++.. +.+.+++..|||
T Consensus 8 ~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f-~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt 81 (365)
T PLN02452 8 VFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEF-LSIIQKAEADLRELLDIPDNYEVLFLQGGAS 81 (365)
T ss_pred eEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCchHH-HHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence 4456666443 379999999887643 23433322 35667778888888753 445667778999
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHH
Q 011669 169 EANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248 (480)
Q Consensus 169 eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~ 248 (480)
.++++++..... +++++++...++.|....-....-... .+........+.... + .+++ +
T Consensus 82 ~~~ea~~~nl~~--~~~~~l~~~~G~fg~r~~~~a~~~g~~--------~~~~~~~~~~~~~~~--~----~~~~----~ 141 (365)
T PLN02452 82 TQFAAIPLNLCK--PGDKADFVVTGSWSKKAAKEAKKYCKT--------NVIASGKDEKYTKIP--S----VSEW----E 141 (365)
T ss_pred HHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCCC--------cEEEecCCCCCCCCC--C----hHHc----C
Confidence 999999986543 456777777777675554433221000 011100001010000 1 2222 2
Q ss_pred ccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeecccccc
Q 011669 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN 328 (480)
Q Consensus 249 ~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~ 328 (480)
. +.++..|.+-.....+|+...+ ++++. ++++|+|-+++ +| + .....+.+++ |+.+--|.+|
T Consensus 142 ~--~~~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g--~-~pidv~~~~v--~~~saqK~lG- 203 (365)
T PLN02452 142 L--TPDAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSN-FL--S-KPVDVSKYGV--IYAGAQKNVG- 203 (365)
T ss_pred C--CCCCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCcc-cc--C-cccCHHHcCE--EEEecccccC-
Confidence 1 2356677776666677774222 33332 38999999997 43 1 2333444554 6666779996
Q ss_pred CccccccccCHHHHHhhcCCC-----------ccccCC-CcHHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHH
Q 011669 329 GIPLGAVVTTPEIAEVLTRRN-----------YFNTFG-GNPVCTAAGHAVLKVIQKD----KLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 329 G~pig~v~~~~~~~~~l~~~~-----------~~~t~~-~~~~~~aaa~a~L~~i~~~----~~~~~~~~~~~~l~~~L~ 392 (480)
.-.+|.+++++++++.+.... ...+++ .|..+..+..++|+.+.++ .+.++.+++.+++++.|+
T Consensus 204 P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~ 283 (365)
T PLN02452 204 PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAID 283 (365)
T ss_pred CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 223688999999887654321 123343 3455666677889988764 455666777777777776
Q ss_pred HhHHhcCceeeEeccce-eEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCc-CCCEEEEeCCCCCCHHHHHHHH
Q 011669 393 ALKDKYGIIGDVRGRGF-LLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF-YGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 393 ~l~~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~~~iRi~p~~~~t~~~id~~l 470 (480)
+...-+....+..-+.. .+.+.+ +.......+.+.++++|++..+|-. .++ +|++.=-.++.++++.++
T Consensus 284 ~~~G~y~~~~~~~~rs~~~vsF~~--------~~~~~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s~yna~~~~~v~~L~ 354 (365)
T PLN02452 284 ESNGFYVCPVEKSVRSLMNVPFTL--------GGSELEAEFVKEAAKAGMVQLKGHRSVGG-MRASIYNAMPLAGVEKLV 354 (365)
T ss_pred hCCCcccCCCChHHhCCeEEEEEc--------CCchhHHHHHHHHHHCCCcccCCccccCc-eEEECcCCCCHHHHHHHH
Confidence 64110111111011122 223332 1122567899999999999988732 234 999987789999999999
Q ss_pred HHHHHHHh
Q 011669 471 DVMDYSLS 478 (480)
Q Consensus 471 ~~l~~~l~ 478 (480)
+.+++.-+
T Consensus 355 ~~m~~f~~ 362 (365)
T PLN02452 355 AFMKDFQA 362 (365)
T ss_pred HHHHHHHH
Confidence 99998754
No 349
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.26 E-value=7.2e-10 Score=107.30 Aligned_cols=303 Identities=16% Similarity=0.133 Sum_probs=170.3
Q ss_pred CChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH-HHHHHHHhhc-----------CCceEEEEcCCccccccccccccc
Q 011669 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANE-LAIMMARLYT-----------GCNDIISLRNAYHGNAAGTMGATA 206 (480)
Q Consensus 139 ~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~-~Alk~ar~~~-----------~~~~ii~~~~~yhG~~~~~~~~~~ 206 (480)
.-..+.++++..++.++.+.++|+...+.|--++ -.|..+..+. ++-+.|+..|+|-.+-..+
T Consensus 67 ~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~----- 141 (425)
T PF12897_consen 67 GLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT----- 141 (425)
T ss_dssp -SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH-----
T ss_pred ccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH-----
Confidence 3567788888889998888887777665554433 3333333321 1346788888884322111
Q ss_pred CCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHHH-H
Q 011669 207 QSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKS-I 284 (480)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l-~ 284 (480)
...|++.+++|....+| | .+.+|+++.. ...++++++-| ..|++|.+ ++++-.++++++ +
T Consensus 142 --------E~~Giemi~VpM~~dGP---D----mD~Ve~LV~~--D~svKGiWcVP~ySNPtG~t-ySde~vrrlA~m~~ 203 (425)
T PF12897_consen 142 --------EHFGIEMIPVPMTEDGP---D----MDMVEELVAE--DPSVKGIWCVPKYSNPTGIT-YSDEVVRRLAAMKT 203 (425)
T ss_dssp --------HHCT-EEEEEEEETTEE--------HHHHHHHTHT--STTEEEEEE-SSS-TTT------HHHHHHHHHS--
T ss_pred --------HhhCcEEEecCCCCCCC---C----HHHHHHHHhc--CCccceEEeCCCccCCCCcc-CCHHHHHHHhcCCc
Confidence 11477777776543222 2 7888988864 35899999999 45566755 688888888888 4
Q ss_pred HHhCCEEEEcccccCccccCC--Ccc--cc----cccCCCccee----eeccccccCccccccccCHHHHHhhcCCCccc
Q 011669 285 KKAGGLCIADEVQAGFARTGS--HFW--GF----EAHGVVPDIV----TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFN 352 (480)
Q Consensus 285 ~~~gillI~DEv~tgfgr~G~--~~~--~~----~~~~~~pDiv----t~sK~~g~G~pig~v~~~~~~~~~l~~~~~~~ 352 (480)
...+..++-|.+|+---.++. ..- .+ ...| .||.+ +.||---.|-.++++.++++-++.+.......
T Consensus 204 AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~ 282 (425)
T PF12897_consen 204 AAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ 282 (425)
T ss_dssp SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH
T ss_pred CCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc
Confidence 467999999999862111110 000 00 0111 35533 67898778888999999998887777655567
Q ss_pred cCCCcHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHh----HHhcC----ce-eeEeccceeEEEEEecCCCcC
Q 011669 353 TFGGNPVCTAAGHAVLKVIQKD-KLQNNAHVVGSYLKERLTAL----KDKYG----II-GDVRGRGFLLGVEFVTDRQLK 422 (480)
Q Consensus 353 t~~~~~~~~aaa~a~L~~i~~~-~~~~~~~~~~~~l~~~L~~l----~~~~~----~~-~~v~g~g~~~~i~~~~~~~~~ 422 (480)
|.+.+-+.|..-..-++. .+ ++.+++++..+.++-+++.. .++++ +. +..+..|.|+.++....
T Consensus 283 tIgpdKvNQLRHvrff~d--~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G---- 356 (425)
T PF12897_consen 283 TIGPDKVNQLRHVRFFKD--AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG---- 356 (425)
T ss_dssp -S---HHHHHHHHHHHHS--HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT----
T ss_pred eeCccHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC----
Confidence 888888887766555542 34 67777877777666665433 23333 22 23444577888887542
Q ss_pred CCCHHHHHHHHHHHHHcCceeeccCc--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 423 TPAKAETLYIMDKMKEMGVLVGKGGF--------YGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 423 ~~~~~~~~~~~~~l~~~Gv~v~~~~~--------~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
.+.++++.+++.||.+.+.|. ....|||+|++ -+.+|++.+++.+.-++
T Consensus 357 -----~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 357 -----TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCV 413 (425)
T ss_dssp ------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHH
Confidence 267899999999999988542 24689999985 48899999999887654
No 350
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.24 E-value=7.5e-09 Score=103.55 Aligned_cols=351 Identities=13% Similarity=0.085 Sum_probs=187.6
Q ss_pred CCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHH
Q 011669 98 GRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177 (480)
Q Consensus 98 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ 177 (480)
...|||+.+-.++. -..++..+||.. .+- ...-++...+|.+..++++ +.+.++++.+|..|+..+.+.
T Consensus 40 ~dV~IDLrSDTgT~---apS~~m~aAM~~--GDD----~Y~gdpSv~~Lee~vael~--G~E~alpthqGRgaE~Il~~~ 108 (467)
T TIGR02617 40 EDVFIDLLTDSGTG---AVTQSMQAAMMR--GDE----AYSGSRSYYALAESVKNIF--GYQYTIPTHQGRGAEQIYIPV 108 (467)
T ss_pred CCeEEECccCCCCC---CCCHHHHHHHHc--CCc----ccccCchHHHHHHHHHHHh--CCceEEECCCCchHHHHHHHh
Confidence 34689998876653 245777777764 111 1223677889999999999 457789999999999988876
Q ss_pred HHhhcCCceEE------EEcCCcccccc-cccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc
Q 011669 178 ARLYTGCNDII------SLRNAYHGNAA-GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250 (480)
Q Consensus 178 ar~~~~~~~ii------~~~~~yhG~~~-~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~ 250 (480)
.... +++.++ ++...||-.+. +...+++..... .+.........+.++++.++ +++++++|+..
T Consensus 109 ~~~~-~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~--l~~~ea~~~~~~~~fkG~~d------l~~le~~I~~~ 179 (467)
T TIGR02617 109 LIKK-REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARN--VYTKEAFDTGVRYDFKGNFD------LEGLERGIEEV 179 (467)
T ss_pred hccc-ccccccccccccccceEEEEecchHHHHHcCceeec--ccchhhcccccCCCCCCCcC------HHHHHHHHhhc
Confidence 5431 122222 11233333322 222232211000 00000000111222333332 78899999865
Q ss_pred CCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc----Cc------cccCCCccccc-ccCCCcce
Q 011669 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA----GF------ARTGSHFWGFE-AHGVVPDI 319 (480)
Q Consensus 251 ~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t----gf------gr~G~~~~~~~-~~~~~pDi 319 (480)
..+++..+...-.+|..|..+.|.+.+++++++|++||+.++.|-+-- -| +..|....-+- ..--..|.
T Consensus 180 g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDs 259 (467)
T TIGR02617 180 GPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADM 259 (467)
T ss_pred CCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCE
Confidence 445677776666666655566789999999999999999999996421 01 12221100000 00123566
Q ss_pred e--eeccccccCccccc-cccCHH----HHHhhcCC----CccccCCCcHHH-HHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 011669 320 V--TMAKGIGNGIPLGA-VVTTPE----IAEVLTRR----NYFNTFGGNPVC-TAAGHAVLKVIQKDKLQNNAHVVGSYL 387 (480)
Q Consensus 320 v--t~sK~~g~G~pig~-v~~~~~----~~~~l~~~----~~~~t~~~~~~~-~aaa~a~L~~i~~~~~~~~~~~~~~~l 387 (480)
+ |+||+++ .|+|. ++++++ +.+.++.. ..+.||+|-.-- +.|....|+..-++++..+--...++|
T Consensus 260 vt~slsKglg--ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl 337 (467)
T TIGR02617 260 LAMSAKKDAM--VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYL 337 (467)
T ss_pred EEEEcCCCCC--CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHH
Confidence 5 5567765 46554 445543 33333332 245677763221 222222344334455665555566777
Q ss_pred HHHHHHhHHhcCceeeEeccceeEEEEEec----CCCcCCCCHHHHHHHHHHH-HHcCceeeccCc-------------C
Q 011669 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVT----DRQLKTPAKAETLYIMDKM-KEMGVLVGKGGF-------------Y 449 (480)
Q Consensus 388 ~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~----~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~-------------~ 449 (480)
.++|.+. ..|++. ..|.-+.++-.. -+....| +..+.-.| ++-||--..-|. .
T Consensus 338 ~~~L~~~--Gvpi~~---~Gghav~iDa~~~lphip~~~fp----a~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~ 408 (467)
T TIGR02617 338 VNGLEEI--GVVCQQ---AGGHAAFVDAGKLLPHIPADQFP----AHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLP 408 (467)
T ss_pred HHHHHhC--CCcEEe---cCccEEEEehhhhCCCCChhhCc----HHHHHHHHHHHcCcceEeecceecccCCCCCccCC
Confidence 7777664 234333 233333333211 1111122 23333333 355554321110 0
Q ss_pred --CCEEEEeCC-CCCCHHHHHHHHHHHHHHHhh
Q 011669 450 --GNVFRITPP-LCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 450 --~~~iRi~p~-~~~t~~~id~~l~~l~~~l~~ 479 (480)
-..+|+..| -..|.+++|.+.+++..+.++
T Consensus 409 ~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 409 CPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred CccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 146898877 456999999999999887653
No 351
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.22 E-value=5.6e-12 Score=122.14 Aligned_cols=202 Identities=18% Similarity=0.147 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcc
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yh 195 (480)
.+|++.+++.+ +.. ++. ....++...++.+++++.++ .+.++|+.|||.||..+++.... +.+.||+-+. .|
T Consensus 7 ~~~~m~~a~~~-a~~-gd~-~Yg~D~~~~~l~~~i~~l~g--~e~a~f~~sGT~An~~al~~~~~--~~~~vi~~~~-aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAA-ANV-GDD-AYGEDPTTARLEERIAELFG--KEAALFVPSGTMANQLALRAHLR--PGESVICADT-AH 78 (290)
T ss_dssp S-HHEEHHHHH-TTS-B-C-CTTSSHHHHHHHHHHHHHHT--SSEEEEESSHHHHHHHHHHHHHH--TTEEEEEETT-EH
T ss_pred CCHHHHHHHHc-ccc-CCc-ccCCChhHHHHHHHHHHHcC--CCEEEEeCCCChHHHHHHHHHHh--cCCceecccc-ce
Confidence 56999999944 322 232 34457889999999999995 46778999999999999997663 5566666544 33
Q ss_pred cccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC--CCceEEEEEcccCCCCcceeCC
Q 011669 196 GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT--SGHVAGFLSESIQGVGGIIELA 273 (480)
Q Consensus 196 G~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~--~~~~a~vi~epi~~~~G~~~~~ 273 (480)
-.....-.... ..|...++++....+.+ .+++|++.++... ..++++|.+|...+..|..+++
T Consensus 79 i~~~E~ga~~~---------~~G~~~~~l~~~~~G~l------~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s 143 (290)
T PF01212_consen 79 IHFDETGAIEE---------LSGAKLIPLPSDDDGKL------TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYS 143 (290)
T ss_dssp HHHSSTTHHHH---------HTTCEEEEEBECTGTBB-------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---
T ss_pred eeeeccchhhH---------hcCcEEEECCCcccCCC------CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCC
Confidence 32222211100 02444444443211222 2788888887532 2578999999887775556679
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccC--ccccCCCcccccccCCCcceeeeccccccCccccc-cccCHHHHH
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAG--FARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGA-VVTTPEIAE 343 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tg--fgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~-v~~~~~~~~ 343 (480)
.+.|++|.++|++||+.++.|-+--. ....| . .....-...|++++|=.-++|.+.|+ +++++++++
T Consensus 144 ~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~-~--~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~ 213 (290)
T PF01212_consen 144 LEELRAISELAREHGLPLHMDGARLANAAAALG-V--SLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIA 213 (290)
T ss_dssp HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHH-H--HHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHH
T ss_pred HHHHHHHHHHHHhCceEEEEehhhHHHhhhccc-c--cHHHHhhhCCEEEEEEEcccccccceEEEechHHHH
Confidence 99999999999999999999965210 00001 0 01111135688876544444555564 557788544
No 352
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.21 E-value=6.8e-09 Score=103.56 Aligned_cols=290 Identities=19% Similarity=0.138 Sum_probs=169.9
Q ss_pred cccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccc
Q 011669 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 134 ~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
...++.++....|.++++++-+ -+..+.++||..|+..++..... .+++|+..+..|.|....+-...
T Consensus 56 ~Y~R~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~~~~l-------- 123 (396)
T COG0626 56 DYSRTGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLFEKIL-------- 123 (396)
T ss_pred ccccCCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHHHHHH--------
Confidence 3345668999999999999984 36688999999999998775544 57899999988865433332221
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
...|+....+.. .+ .+.+++.+. ++++++|++|+.-|+.-.+.. +++|.++|+++|+++|+
T Consensus 124 -~~~gi~~~~~d~-------~~----~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvV 184 (396)
T COG0626 124 -QKFGVEVTFVDP-------GD----DEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVV 184 (396)
T ss_pred -HhcCeEEEEECC-------CC----hHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEE
Confidence 113555443322 11 234444443 247999999998888766665 99999999999999999
Q ss_pred cccccCccccCCCcccccccCCCccee--eeccccccC--ccccccccCH-HHHHhhcCCCc-cccCCCcHHHHHHHHHH
Q 011669 294 DEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNG--IPLGAVVTTP-EIAEVLTRRNY-FNTFGGNPVCTAAGHAV 367 (480)
Q Consensus 294 DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G--~pig~v~~~~-~~~~~l~~~~~-~~t~~~~~~~~aaa~a~ 367 (480)
|..... + ..++......||+ +.+|-++|. .=.|.|+++. ++.+.+..... ..-....|..+...+..
T Consensus 185 DNTfat----P---~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRG 257 (396)
T COG0626 185 DNTFAT----P---VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRG 257 (396)
T ss_pred ECCccc----c---cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhc
Confidence 998752 2 1123333446776 577999974 5567677665 45554421111 01112335555444444
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhHHhcCceee------------------EeccceeEEEEEecCCCcCCCCHHHH
Q 011669 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD------------------VRGRGFLLGVEFVTDRQLKTPAKAET 429 (480)
Q Consensus 368 L~~i~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~------------------v~g~g~~~~i~~~~~~~~~~~~~~~~ 429 (480)
|+.+. -..++..++...+.+.|++ +|.+.. ..|.|.|+.|++... ..+
T Consensus 258 lkTL~--~Rm~~~~~nA~~IA~~L~~----~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--------~~~ 323 (396)
T COG0626 258 LRTLA--LRMERHNENALKIAEFLAD----HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--------EAA 323 (396)
T ss_pred cchHH--HHHHHHHHHHHHHHHHHhc----CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--------HHH
Confidence 43221 1233333344444444433 444432 225788888888541 224
Q ss_pred HHHHHHHHHcCceeeccC-------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 430 LYIMDKMKEMGVLVGKGG-------------------------FYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 430 ~~~~~~l~~~Gv~v~~~~-------------------------~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.++.+.|+--.+...-|| ..++.+|++..+ |+++.+++-|+++++.
T Consensus 324 ~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 324 KKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAK 394 (396)
T ss_pred HHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Confidence 445444432221111111 124678998554 5566666666666654
No 353
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=1.3e-09 Score=105.36 Aligned_cols=342 Identities=18% Similarity=0.185 Sum_probs=187.4
Q ss_pred CCeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCC-C--
Q 011669 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPG-N-- 157 (480)
Q Consensus 81 ~p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~-~-- 157 (480)
+|--+.=|-|.| .|.+|+..+ . +.|.+|=+..++.. ..-...+-....++.+.+.+++-+ +
T Consensus 25 R~~KVNLgIGvY-~de~Gk~pv--------l------~aV~~Ae~~l~~~~-~~k~Yl~i~G~~~f~~~~~~llFG~d~~ 88 (396)
T COG1448 25 RPNKVNLGIGVY-KDEDGKTPV--------L------RAVKKAEKRLLEQE-KTKNYLPIEGLPEFLEAVQKLLFGADSP 88 (396)
T ss_pred CcCeeeeeeeee-eCCCCCcch--------h------HHHHHHHHHhhccc-cccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence 344555666775 577765322 1 44555433333221 111122345667777887777533 2
Q ss_pred -C--C--EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 158 -L--K--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 158 -~--~--~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
+ + ..+-|.|||-|+-.+-+......++..|-+.++++-.+. ..... .|.....+|......-
T Consensus 89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~-~If~~------------aGl~v~~Y~Yyd~~~~ 155 (396)
T COG1448 89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK-AIFEA------------AGLEVETYPYYDAETK 155 (396)
T ss_pred HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHH-HHHHh------------cCCceeeeeccccccc
Confidence 1 1 235678999999999987766667777888888883322 22222 2333333332111111
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC-Cccccc
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS-HFWGFE 311 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~-~~~~~~ 311 (480)
.-| .+.+-..|+.. +.....++-.+-+|++|.- ++++-|++|.++.++.|.+-++|=+|-||+.... .-++..
T Consensus 156 ~~d----f~~mla~L~~a-~~~~vvLLH~CcHNPTG~D-~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR 229 (396)
T COG1448 156 GLD----FDGMLADLKTA-PEGSVVLLHGCCHNPTGID-PTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALR 229 (396)
T ss_pred ccc----HHHHHHHHHhC-CCCCEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHH
Confidence 112 23333333332 2234445555688888865 5888899999999999999999999999974321 111111
Q ss_pred c-cCCCc-cee--eeccccc-cCccccccc---cCHHHHHhhcCC---CccccCCCcHHHHH-HHHHHHHH--h-----h
Q 011669 312 A-HGVVP-DIV--TMAKGIG-NGIPLGAVV---TTPEIAEVLTRR---NYFNTFGGNPVCTA-AGHAVLKV--I-----Q 372 (480)
Q Consensus 312 ~-~~~~p-Div--t~sK~~g-~G~pig~v~---~~~~~~~~l~~~---~~~~t~~~~~~~~a-aa~a~L~~--i-----~ 372 (480)
. ....+ -++ +|||.|| =|-|+|+.. -+++..+.+... ..-++|+.+|---+ .....|+. + +
T Consensus 230 ~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 230 LFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred HHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHH
Confidence 1 01122 333 6899999 588988644 234555444321 11255554443222 22222211 0 0
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCC
Q 011669 373 -KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGN 451 (480)
Q Consensus 373 -~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 451 (480)
-+...+++.++++.|.+.|++......+-.-....|+|...-+ ..+++.+...+.||++...|
T Consensus 310 El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl------------s~~QV~rLree~~IY~v~sG---- 373 (396)
T COG1448 310 ELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL------------SPEQVDRLREEFGIYLVASG---- 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC------------CHHHHHHHHHhccEEEecCC----
Confidence 1234555666666666666654322222222344455432222 12445555557899998654
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 452 VFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 452 ~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
||+.. ..++..|+.+.++|.++
T Consensus 374 --Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 374 --RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred --eeeec-cCChhhHHHHHHHHHhh
Confidence 77754 57889999999998875
No 354
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.18 E-value=3.5e-08 Score=93.12 Aligned_cols=333 Identities=16% Similarity=0.122 Sum_probs=196.8
Q ss_pred EeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc-cc-ccccC------ChHHHHHHHHHHHhCCCCCCEEEEeC
Q 011669 94 FDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HS-TVLYL------NHAIADFAEALASKMPGNLKVVFFTN 165 (480)
Q Consensus 94 ~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~-~~~~~------~~~~~~l~e~L~~~~~~~~~~v~f~~ 165 (480)
-+.+|-.|||- ++||-.++.+.+...+...+-| +. ...+. -..-..+..+|+-+.+....+|..++
T Consensus 27 ~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d 100 (407)
T COG3844 27 ALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD 100 (407)
T ss_pred cCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeC
Confidence 35677788884 4567544455554444332211 10 00011 12234566677777777777888888
Q ss_pred CHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccc-cccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHH
Q 011669 166 SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT-MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244 (480)
Q Consensus 166 sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~-~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le 244 (480)
|-|--+...|-.+...+.++.||++++.....-... ..+... ... ...+..+ .+ .++++
T Consensus 101 tts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~--~~~---~~~~~~~-----------~~----P~~~~ 160 (407)
T COG3844 101 TTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADL--LGI---GYDLEGV-----------IA----PRALE 160 (407)
T ss_pred CcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhh--hcc---cccceee-----------eC----hHHHH
Confidence 877666666655555555667777776543221111 111000 000 0011111 01 34677
Q ss_pred HHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCccee--ee
Q 011669 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TM 322 (480)
Q Consensus 245 ~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~ 322 (480)
++++ ++++.|++..+|--+|.... +.+|-.++++||++++.|=+++ - | -...+.++-..|+. |-
T Consensus 161 ~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-a---G--avp~~Lh~~gaDfaigcs 226 (407)
T COG3844 161 EAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-A---G--AVPVDLHAAGADFAIGCS 226 (407)
T ss_pred Hhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc-c---C--CcceeecccCCCeeeeee
Confidence 7774 58999999999999998877 9999999999999999999887 2 3 12244444445544 45
Q ss_pred ccccccCc-cccccccCHHHHHhhcCC--------------------CccccC-CC--cHHHHHHHHHHHHHhhh---hH
Q 011669 323 AKGIGNGI-PLGAVVTTPEIAEVLTRR--------------------NYFNTF-GG--NPVCTAAGHAVLKVIQK---DK 375 (480)
Q Consensus 323 sK~~g~G~-pig~v~~~~~~~~~l~~~--------------------~~~~t~-~~--~~~~~aaa~a~L~~i~~---~~ 375 (480)
=|-+++|- -.+++.+.++..+...+. .+..-| .+ +-+++++...+|++..+ .+
T Consensus 227 yKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~ 306 (407)
T COG3844 227 YKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITE 306 (407)
T ss_pred ceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHH
Confidence 58888652 344455544443332221 000011 11 23455555567776654 45
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhcCce----eeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCC
Q 011669 376 LQNNAHVVGSYLKERLTALKDKYGII----GDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGN 451 (480)
Q Consensus 376 ~~~~~~~~~~~l~~~L~~l~~~~~~~----~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 451 (480)
+.++.-.+.+++.+.++.....+++- ..-..+|..+.+.. | ...++++.|.++||+.--- ..+
T Consensus 307 lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h--------p---~~~~V~qaLi~rGVigD~R--~P~ 373 (407)
T COG3844 307 LRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH--------P---HGYQVMQALIDRGVIGDFR--EPD 373 (407)
T ss_pred HHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEec--------C---cHHHHHHHHHHcCcccccc--CCC
Confidence 66777778888888887765544321 11222344443333 1 2577999999999986422 257
Q ss_pred EEEEeC-CCCCCHHHHHHHHHHHHHHHhh
Q 011669 452 VFRITP-PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 452 ~iRi~p-~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+||.| |+..+-+|+=.+++.|+++++.
T Consensus 374 vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 374 VLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred eeeecCccceechhHHHHHHHHHHHHHHh
Confidence 899987 4778999999999999999875
No 355
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.17 E-value=7.3e-09 Score=102.16 Aligned_cols=194 Identities=17% Similarity=0.081 Sum_probs=131.8
Q ss_pred cccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCcccccc
Q 011669 136 VLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV 215 (480)
Q Consensus 136 ~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~ 215 (480)
.+..+|....+.+.+++..+ .+.++.++||..|...|+..... .+++|+.+...|.|.....-....
T Consensus 72 sr~~nPt~~~le~~iaal~g--a~~~l~fsSGmaA~~~al~~L~~--~g~~iV~~~~~Y~gT~~~l~~~~~--------- 138 (409)
T KOG0053|consen 72 SRSGNPTRDVLESGIAALEG--AAHALLFSSGMAAITVALLHLLP--AGDHIVATGDVYGGTLRILRKFLP--------- 138 (409)
T ss_pred ccCCCCchHHHHHHHHHHhC--CceEEEecccHHHHHHHHHHhcC--CCCcEEEeCCCcccHHHHHHHHHH---------
Confidence 34457777888888888874 35688999999999999986653 678899999999764433222111
Q ss_pred CCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 216 QTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 216 ~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
..|+..... |.. ..+++++.++ .++.+|++|.+-|+...++. +++|+++|+++|+++|+|+
T Consensus 139 ~~gie~~~v----------d~~-~~~~~~~~i~----~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDn 199 (409)
T KOG0053|consen 139 KFGGEGDFV----------DVD-DLKKILKAIK----ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDN 199 (409)
T ss_pred HhCceeeee----------chh-hHHHHHHhhc----cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeC
Confidence 123322211 100 0345555554 37999999999888887766 9999999999999999999
Q ss_pred cccCccccCCCcccccccCCCcceee--eccccccC--ccccccccC-HHHHHhhcCCCccccCCCcHHHHHHHHHHH
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIVT--MAKGIGNG--IPLGAVVTT-PEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDivt--~sK~~g~G--~pig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L 368 (480)
...+. ..++......|||+ .+|-|+|. +=.|.++.+ +++...+.......-++.+|+.+.-...-|
T Consensus 200 Tf~~p-------~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rgl 270 (409)
T KOG0053|consen 200 TFGSP-------YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGL 270 (409)
T ss_pred CcCcc-------cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCc
Confidence 86543 12333344578885 66999974 666777775 777777665443344566777766555444
No 356
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.13 E-value=3.2e-08 Score=98.45 Aligned_cols=323 Identities=13% Similarity=0.079 Sum_probs=184.6
Q ss_pred eccCCcccccCCCCCHHHHHHHHHHHHh----------ccccccccCChHHHHHHHHHHHhCCC--CCCEEEEeCCHHHH
Q 011669 103 DAFGGIATVCCGHCHPYVVDSIVNQIKR----------IQHSTVLYLNHAIADFAEALASKMPG--NLKVVFFTNSGTEA 170 (480)
Q Consensus 103 D~~~g~~~~~lGh~~p~v~~A~~~~~~~----------~~~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~~sGseA 170 (480)
.|..|-.. -+++|.+++.+.+.+ ..|.+..| .....+..+.|.+++.. +.+.+++..|||.+
T Consensus 7 nF~aGPa~-----lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F-~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~ 80 (364)
T PRK12462 7 NFSGGPGA-----LPDTVLEQVRQAVVELPETGLSVLGMSHRSSWF-SSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQ 80 (364)
T ss_pred eecCCCcC-----CCHHHHHHHHHHHhcccccCccccccccccHHH-HHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHH
Confidence 45555443 368999999877765 23333222 34556777777777753 45556666679999
Q ss_pred HHHHHHHHHhhcCCceEE-EEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHc
Q 011669 171 NELAIMMARLYTGCNDII-SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249 (480)
Q Consensus 171 ~~~Alk~ar~~~~~~~ii-~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~ 249 (480)
+++++..... ++++++ +...++.|....-.+..-. .+..+.. .....|+.-.. .+++ +.
T Consensus 81 ~ea~~~Nll~--~g~~~~~~~~tG~fg~r~~~ea~~~g----------~v~~~~~--~~~~~~~~~p~--~~~~----~~ 140 (364)
T PRK12462 81 FSMIPMNFSR--PGAAAPEYVTTGYWSRKAIGEASRVA----------AMRVVWD--GAASGYRTLPS--LAEL----DW 140 (364)
T ss_pred HHHHHHHcCC--CCCcEEEEEeCCHHHHHHHHHHHhcC----------CceEecC--cCCCCCCcCCC--HHHh----cc
Confidence 9998875543 445455 5556655544332221100 0111100 00001110000 1222 11
Q ss_pred cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccc
Q 011669 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIG 327 (480)
Q Consensus 250 ~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g 327 (480)
+.+.+.|.+-.+...+|+..+ ++.+.+++++|+|-+-+ ++ + ..+.++.+ |++..| |++|
T Consensus 141 --~~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~~--s-~pid~~~~----dvi~agsQKnlg 201 (364)
T PRK12462 141 --DARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-FM--S-RPFDVEAY----GMVYAHAQKNLG 201 (364)
T ss_pred --CCCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-hh--C-CCCChHHc----cEEEeeccccCC
Confidence 224566777666667777653 23334799999998865 42 2 22333433 676554 9998
Q ss_pred cCccccccccCHHHHHhhcCCC-----------ccccCCCc-HHHHHHHHHHHHHhhhh--H---HHHHHHHHHHHHHHH
Q 011669 328 NGIPLGAVVTTPEIAEVLTRRN-----------YFNTFGGN-PVCTAAGHAVLKVIQKD--K---LQNNAHVVGSYLKER 390 (480)
Q Consensus 328 ~G~pig~v~~~~~~~~~l~~~~-----------~~~t~~~~-~~~~aaa~a~L~~i~~~--~---~~~~~~~~~~~l~~~ 390 (480)
.-.++.++.+++.++...... ...+++.+ .....+...+|+.+.++ + +.++.++..+.+++.
T Consensus 202 -P~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~ 280 (364)
T PRK12462 202 -PAGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYAT 280 (364)
T ss_pred -CCceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 334578889999887654321 12455444 55667777889988766 3 445555566666666
Q ss_pred HHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHH
Q 011669 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470 (480)
Q Consensus 391 L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l 470 (480)
++++..-+....+..-+..|. +.|.- ++.....++.+.+.++|+.-..|-..-+-+|++.--.++.++++.++
T Consensus 281 id~~~~~~~~~~~~~~RS~mn-v~f~~------~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~ 353 (364)
T PRK12462 281 LDALNEVIDCHAHRAARSTMN-VAFRF------RQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLC 353 (364)
T ss_pred HHhCCCcccCCCChhhcCcce-EEEEc------CCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHH
Confidence 666521122222223333332 22321 23345678999999999998665322234899987889999999999
Q ss_pred HHHHHHHh
Q 011669 471 DVMDYSLS 478 (480)
Q Consensus 471 ~~l~~~l~ 478 (480)
+-+++.-+
T Consensus 354 ~fm~~f~~ 361 (364)
T PRK12462 354 AFLKDFAI 361 (364)
T ss_pred HHHHHHHH
Confidence 99987654
No 357
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.10 E-value=7.4e-08 Score=99.09 Aligned_cols=254 Identities=18% Similarity=0.112 Sum_probs=147.7
Q ss_pred CCCHHHHHHHHHHHHhccccccccC--ChHHHHHHHHHHHhCCCC-CCEEEEeCCHHHHHHHHHHHHHhhcC----C---
Q 011669 115 HCHPYVVDSIVNQIKRIQHSTVLYL--NHAIADFAEALASKMPGN-LKVVFFTNSGTEANELAIMMARLYTG----C--- 184 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~~~~~~~~~~--~~~~~~l~e~L~~~~~~~-~~~v~f~~sGseA~~~Alk~ar~~~~----~--- 184 (480)
+.++...+++...+.+..-....++ .....++...+++++..+ .-.-.||+||||||..|+.++|.... +
T Consensus 73 ~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~ 152 (460)
T COG0076 73 RVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESG 152 (460)
T ss_pred CCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccc
Confidence 4567777887777765322112222 334456667777777652 23468999999999999999987531 1
Q ss_pred ----ceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE-EEE
Q 011669 185 ----NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA-GFL 259 (480)
Q Consensus 185 ----~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a-~vi 259 (480)
...|++....|-+..-+....+- +...++.... .+.-| .+++++++++. .+. +|+
T Consensus 153 ~~~~~P~ii~s~~aH~s~~Kaa~~lG~----------~~~~v~~~~~---~~~id----~~~l~~~i~~~---t~~g~vV 212 (460)
T COG0076 153 KPGGKPNIVCSETAHFSFEKAARYLGL----------GLRRVPTVPT---DYRID----VDALEEAIDEN---TIGGVVV 212 (460)
T ss_pred ccCCCCeEEecCcchhHHHHHHHHhCC----------CceeEEeccC---ccccC----HHHHHHHHHhh---ccCceEE
Confidence 11344444555444433333321 2222221110 11123 67899888753 222 366
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc-CCCccccc-ccCC-Ccceeeec--cccccCccccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART-GSHFWGFE-AHGV-VPDIVTMA--KGIGNGIPLGA 334 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~-G~~~~~~~-~~~~-~pDivt~s--K~~g~G~pig~ 334 (480)
..-.....|.+-+ +++|.++|++||+++++|.++.||-.. -.+. .. .+++ ..|.++++ |.....+++|+
T Consensus 213 ~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~--~~~~f~l~~vdSIt~d~HK~g~aP~~~G~ 286 (460)
T COG0076 213 GTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPD--GRWDFGLEGVDSITVDGHKYGLAPIGCGV 286 (460)
T ss_pred EEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCcc--chhhcCCCCceEEEECcccccCCCCCceE
Confidence 5555666777766 999999999999999999999987421 1010 01 1233 35667766 77777788999
Q ss_pred cccCHH--HHHhhcCCC--------ccccCCCc--HHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHh
Q 011669 335 VVTTPE--IAEVLTRRN--------YFNTFGGN--PVCTAAGHAVLKVIQKDKL---QNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 335 v~~~~~--~~~~l~~~~--------~~~t~~~~--~~~~aaa~a~L~~i~~~~~---~~~~~~~~~~l~~~L~~l 394 (480)
++.+++ +.+.+.-.. ...|..++ ....++.+++++.+-.+++ .++..++.+++.++|+++
T Consensus 287 il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 287 VLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred EEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998865 444332111 01122222 2245556677777655544 445557777777777665
No 358
>PLN02271 serine hydroxymethyltransferase
Probab=99.07 E-value=1.4e-07 Score=97.36 Aligned_cols=283 Identities=13% Similarity=-0.019 Sum_probs=147.6
Q ss_pred eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHH
Q 011669 164 TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV 243 (480)
Q Consensus 164 ~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~l 243 (480)
.-||+.||.+++.... .++++|+..+..+-| .......+. ...+.......+..++++.... ....| .+++
T Consensus 220 p~SGs~AN~aV~~ALl--~PGD~IL~ldl~~GG-Hlshg~~~~-~g~~vs~sG~~~~~vpY~~d~~-~g~ID----yd~l 290 (586)
T PLN02271 220 PYSCTSANFAVYTGLL--LPGDRIMGLDSPSGG-HMSHGYYTP-GGKKVSGASIFFESLPYKVNPQ-TGYID----YDKL 290 (586)
T ss_pred eccHHHHHHHHHHHhc--CCCCEEEEecCCCCC-chhcccccc-cccccccccceEEEEEcccccc-cCccC----HHHH
Confidence 3499999999997653 478889888765433 222211000 0000000001123333322100 00112 5777
Q ss_pred HHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec
Q 011669 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA 323 (480)
Q Consensus 244 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s 323 (480)
++.... .+++.|++...... -.--+++++++|+++|+++++|-+|. .|.-....+ ...-...|+++++
T Consensus 291 ek~a~~---~rPKLII~g~Sayp------r~~D~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~--~sP~~~aDvvt~T 358 (586)
T PLN02271 291 EEKALD---FRPKILICGGSSYP------REWDYARFRQIADKCGAVLMCDMAHI-SGLVAAKEC--VNPFDYCDIVTST 358 (586)
T ss_pred HHHhhh---cCCeEEEECchhcc------CcCCHHHHHHHHHHcCCEEEEECccc-ccccccCcC--CCCCcCCcEEEeC
Confidence 774432 37888988553322 22228999999999999999999996 433221111 1111146888765
Q ss_pred --cccccCccccccccCHH--------------------HHHhhcCCCccccCCCcHHHHHHHH-HHHHHhhhh---HHH
Q 011669 324 --KGIGNGIPLGAVVTTPE--------------------IAEVLTRRNYFNTFGGNPVCTAAGH-AVLKVIQKD---KLQ 377 (480)
Q Consensus 324 --K~~g~G~pig~v~~~~~--------------------~~~~l~~~~~~~t~~~~~~~~aaa~-a~L~~i~~~---~~~ 377 (480)
|++.|.-. |.++.+++ +.+.+....+-+..+++.....|++ .+++.+... ++.
T Consensus 359 THKtLrGPrG-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya 437 (586)
T PLN02271 359 THKSLRGPRG-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYM 437 (586)
T ss_pred CcccCCCCCc-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHH
Confidence 99975322 55666543 4444444333333344333333333 345544333 355
Q ss_pred HHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------cCC
Q 011669 378 NNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------FYG 450 (480)
Q Consensus 378 ~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~ 450 (480)
+++.++.+.|.+.|.+. .+.++..- -...++++++.... .....+.+.|.+-||.+.... ...
T Consensus 438 ~QVv~NAkaLA~~L~~~--G~~vv~gg-TdnHlvLvDl~~~g-------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~p 507 (586)
T PLN02271 438 QQVKKNAQALASALLRR--KCRLVTGG-TDNHLLLWDLTTLG-------LTGKNYEKVCEMCHITLNKTAIFGDNGTISP 507 (586)
T ss_pred HHHHHHHHHHHHHHHHC--CCeEeeCC-CCcceeeecCcccC-------CCHHHHHHHHHHcCeEeccccCCCCCCCCCC
Confidence 55666666666666553 33333211 11234555553211 113445566777788884321 112
Q ss_pred CEEEEeCCCCC----CHHHHHHHHHHHHHHHh
Q 011669 451 NVFRITPPLCF----TKEDADYLVDVMDYSLS 478 (480)
Q Consensus 451 ~~iRi~p~~~~----t~~~id~~l~~l~~~l~ 478 (480)
+-|||..|..+ .++|++++.+.|.++++
T Consensus 508 sGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 508 GGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 45888766443 56888888888877764
No 359
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.04 E-value=1.1e-07 Score=105.52 Aligned_cols=302 Identities=17% Similarity=0.158 Sum_probs=172.9
Q ss_pred CCHHHHHHHHHHHHhccccccccC-------ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc-CCceE
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYL-------NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT-GCNDI 187 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~-------~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~-~~~~i 187 (480)
-++.|.+++.+..+-+.-.+ -|. -+.+.++...++++++.+.+++-++.++|.+.++++...+... ++++|
T Consensus 117 ~P~~v~~~i~~~~~~~Tayt-PYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~V 195 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYT-PYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKF 195 (993)
T ss_pred CCHHHHHHHHhChHHHhhcC-CCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEE
Confidence 45666688877554321111 122 2335678888999998888889999999999997776544322 23567
Q ss_pred EEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCC
Q 011669 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVG 267 (480)
Q Consensus 188 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~ 267 (480)
++.+..| +....++.... ...|+.....+. ++.. .. .+.+++++ -.+.+..
T Consensus 196 lVs~~~h-P~~~~v~~t~a--------~~~GieV~~v~~--------------~~~~-~~----~~~v~~vl-vq~P~~~ 246 (993)
T PLN02414 196 LIASNCH-PQTIDVCQTRA--------DGLGLEVVVADE--------------KDFD-YS----SGDVCGVL-VQYPATD 246 (993)
T ss_pred EEcCccC-HhHHHHHHHhh--------hhcCCEEEEecc--------------hhhc-cc----cCceEEEE-EecCCCC
Confidence 7766555 43333332111 112444443321 0100 00 22566665 3455567
Q ss_pred cceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec-cccc-----cCccccccccCHHH
Q 011669 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA-KGIG-----NGIPLGAVVTTPEI 341 (480)
Q Consensus 268 G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s-K~~g-----~G~pig~v~~~~~~ 341 (480)
|.+.+ +++|.++|+++|+++|+ -++. ++-.+ .- ..-....|+++.+ ..++ ||-..|++.+++++
T Consensus 247 G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~--l~--~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~ 316 (993)
T PLN02414 247 GEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTM--LK--PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEY 316 (993)
T ss_pred eEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcC--CC--CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHH
Confidence 88876 99999999999999999 3332 32222 10 1113346777543 3233 45558999999988
Q ss_pred HHhhcCCCcc----------c--------------cCCCcHH---HHHHHHHHH--HHhhh---hHHHHHHHHHHHHHHH
Q 011669 342 AEVLTRRNYF----------N--------------TFGGNPV---CTAAGHAVL--KVIQK---DKLQNNAHVVGSYLKE 389 (480)
Q Consensus 342 ~~~l~~~~~~----------~--------------t~~~~~~---~~aaa~a~L--~~i~~---~~~~~~~~~~~~~l~~ 389 (480)
...+.....+ . ....|.- +..+++++. ..+.. +++.+++.++..++++
T Consensus 317 ~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~ 396 (993)
T PLN02414 317 KRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAA 396 (993)
T ss_pred HhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 6654321100 0 0112221 222233222 11111 3455777788888888
Q ss_pred HHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHH
Q 011669 390 RLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 390 ~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~ 469 (480)
+|.++ .+..... -.+--+.+.- + ...++.+.|.++||.++... .+.+|+++...+|++|||.+
T Consensus 397 ~L~~~--G~~~~~~----~~f~~vt~~~------~---~~~~v~~~L~~~gI~l~~~~--~~~lrvs~~e~~T~edId~L 459 (993)
T PLN02414 397 GLKKL--GFQVQSL----PFFDTVKVKC------S---DADAIADAAAKVGINLRVVD--ANTVTVSFDETTTLEDVDKL 459 (993)
T ss_pred HHhhc--CCccCCC----CCcCeEEEec------C---CHHHHHHHHHHCCCeeEEec--CCeEEEEeeccCCHHHHHHH
Confidence 88654 2222211 1111122211 1 13668899999999887543 56799999999999999999
Q ss_pred HHHHH
Q 011669 470 VDVMD 474 (480)
Q Consensus 470 l~~l~ 474 (480)
+++|.
T Consensus 460 ~~~l~ 464 (993)
T PLN02414 460 FKVFA 464 (993)
T ss_pred HHHHc
Confidence 99996
No 360
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=8.8e-07 Score=86.29 Aligned_cols=323 Identities=15% Similarity=0.155 Sum_probs=178.2
Q ss_pred CCCHHHHHHHHHHHHh-cccc--ccccC-----ChHHHHHHHHH-HHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCc
Q 011669 115 HCHPYVVDSIVNQIKR-IQHS--TVLYL-----NHAIADFAEAL-ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN 185 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~-~~~~--~~~~~-----~~~~~~l~e~L-~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~ 185 (480)
+..|.|.+|+-..+.. +... ..+|+ -+..++|+-.. .++++.+.-+| =-.||+.||.+++..... +++
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anV-QPhSGs~AN~av~~All~--pGD 113 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANV-QPHSGSQANQAVYLALLQ--PGD 113 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcccc-CCCCchHHHHHHHHHHcC--CCC
Confidence 4569999998876653 2211 11221 24445555444 44555544444 457999999998876554 778
Q ss_pred eEEEEcCCccccccccc-ccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccC
Q 011669 186 DIISLRNAYHGNAAGTM-GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQ 264 (480)
Q Consensus 186 ~ii~~~~~yhG~~~~~~-~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~ 264 (480)
.|+..+-.. |....-- ..+..+.+ +..++++... ++.....++++++.... +.+.||+
T Consensus 114 timgm~l~~-GGHltHg~~v~~sG~~--------~~~v~Y~vd~-----et~~IDyD~~~k~a~e~---kPK~ii~---- 172 (413)
T COG0112 114 TIMGLDLSH-GGHLTHGSPVNFSGKL--------FNVVSYGVDP-----ETGLIDYDEVEKLAKEV---KPKLIIA---- 172 (413)
T ss_pred eEecccCCC-CCcccCCCCCCcccee--------EEeEeccccc-----ccCccCHHHHHHHHHHh---CCCEEEE----
Confidence 887764333 3222111 11111111 2223332211 11111267788877754 5566765
Q ss_pred CCCcceeCCCChHHHHHHHHHHhCCEEEEcccc-cCccccCCCcccccccCCCcceeeec--cccccCccccccccC-HH
Q 011669 265 GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ-AGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT-PE 340 (480)
Q Consensus 265 ~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~-~~ 340 (480)
|+..-+-.--+++++++|++.|++|.+|-+| .|+--.| .+ +..=-..|+||-+ |.|-| -|-|.|+.+ ++
T Consensus 173 --G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G--~~--p~P~~~AdvVTtTTHKTlrG-PrGG~Il~~~ee 245 (413)
T COG0112 173 --GGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGG--VH--PNPLPHADVVTTTTHKTLRG-PRGGIILTNDEE 245 (413)
T ss_pred --CccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcc--cC--CCCCCccceEeCCcccCCCC-CCceEEEeccHH
Confidence 3333334444899999999999999999886 4553344 11 1111126888655 88865 255667777 48
Q ss_pred HHHhhcCCCccccCCCcHHHHHHHHHH-HHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEe
Q 011669 341 IAEVLTRRNYFNTFGGNPVCTAAGHAV-LKVIQK---DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416 (480)
Q Consensus 341 ~~~~l~~~~~~~t~~~~~~~~aaa~a~-L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~ 416 (480)
+.+.+....+.++.+++-+-..||.++ +....+ .++.+++.++.+.|.+.|.+. .+.++..- -...++.+++.
T Consensus 246 l~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvsGg-TdnHl~lVDl~ 322 (413)
T COG0112 246 LAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GFKVVSGG-TDNHLVLVDLR 322 (413)
T ss_pred HHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc--CCeEecCC-ccceEEEEEcc
Confidence 988888766666666654444443332 222222 245566666666666666653 23222210 01224455554
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------c-CCCEEEEeCCCCC----CHHHHHHHHHHHHHHHh
Q 011669 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------F-YGNVFRITPPLCF----TKEDADYLVDVMDYSLS 478 (480)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~-~~~~iRi~p~~~~----t~~~id~~l~~l~~~l~ 478 (480)
+.. .......+.|.+.||.+-... + ...-|||..|..+ .++|+.+..+.|.+++.
T Consensus 323 ~~~-------~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 323 SKG-------LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred cCC-------CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 211 113445556667788875321 1 1245899877554 56788888888887775
No 361
>PRK15029 arginine decarboxylase; Provisional
Probab=98.89 E-value=1.3e-06 Score=94.43 Aligned_cols=311 Identities=10% Similarity=0.043 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCccccc-cCCCe
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNV-VQTGV 219 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~-~~~g~ 219 (480)
.+.+..+..++.++.+ +..|.+||.|.+|.+++..+.. ++++|++-+++ |-+...++.+++. +.|-.+. ...|+
T Consensus 206 ~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~--~gd~Vlv~RN~-HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 206 AFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMT--DNDVVVVDRNC-HKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcC--CCCEEEeeccc-HHHHHHHHHHcCCeEEEecccccccCC
Confidence 3444444445556543 5667788888888877765543 56667766555 6666667776653 2222211 01111
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccCC------Cce-EEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS------GHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~------~~~-a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
..-.. ......+.+++.++.+.. .++ ++|+..|.. -|.+.. +++|.++|+++|+.|+
T Consensus 282 ~~~i~----------~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 282 IGPIY----------PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLH 345 (755)
T ss_pred ccCCC----------ccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEE
Confidence 11000 000004677777764311 112 456665643 355555 8999999999999999
Q ss_pred EcccccCccccCCCcccc-ccc-----C-CCcc-eeeec--cccccCcccc-ccccCHH--HH--HhhcCCC-ccccCCC
Q 011669 293 ADEVQAGFARTGSHFWGF-EAH-----G-VVPD-IVTMA--KGIGNGIPLG-AVVTTPE--IA--EVLTRRN-YFNTFGG 356 (480)
Q Consensus 293 ~DEv~tgfgr~G~~~~~~-~~~-----~-~~pD-ivt~s--K~~g~G~pig-~v~~~~~--~~--~~l~~~~-~~~t~~~ 356 (480)
+||++.+...-. ..+.- ... . ..+| +++-| |.+++ +.-| ++-.+.. .+ +.+.... ...|-+.
T Consensus 346 vDEAhGah~~F~-~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSP 423 (755)
T PRK15029 346 FDEAWYGYARFN-PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYMMHATTSP 423 (755)
T ss_pred EECccccccccC-ccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHHHHcCCCc
Confidence 999986532222 12211 111 1 3477 66655 77753 2222 2222211 11 1222211 1233344
Q ss_pred cHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhcC----c-----------------------------
Q 011669 357 NPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYG----I----------------------------- 400 (480)
Q Consensus 357 ~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~~----~----------------------------- 400 (480)
+-+-++..-.+.+.++. +.+.++..+....+|+.+.++...+. .
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 503 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLL 503 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhh
Confidence 43333333333333432 34666677777888888877643110 0
Q ss_pred -----eeeEe------cc-c----------eeEEEEEecCCCcCC--CCHHHHHHHHHHHHHcCceeeccCcCCCEEEEe
Q 011669 401 -----IGDVR------GR-G----------FLLGVEFVTDRQLKT--PAKAETLYIMDKMKEMGVLVGKGGFYGNVFRIT 456 (480)
Q Consensus 401 -----~~~v~------g~-g----------~~~~i~~~~~~~~~~--~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~ 456 (480)
..... |. + +-+.+.....+.+.. ..+.-+..+.+.|.++||.+--.+ ...+-+.
T Consensus 504 ~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~--~~~vL~l 581 (755)
T PRK15029 504 TTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT--DFQIMFL 581 (755)
T ss_pred ccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--CCeEEEE
Confidence 00000 00 0 000111100000000 000012367778888899997655 3445566
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 011669 457 PPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 457 p~~~~t~~~id~~l~~l~~~ 476 (480)
.+...|+++++.++++|.+.
T Consensus 582 ~s~g~t~~~~~~L~~aL~~~ 601 (755)
T PRK15029 582 FSMGVTRGKWGTLVNTLCSF 601 (755)
T ss_pred eCCCCCHHHHHHHHHHHHHH
Confidence 67789999999999999865
No 362
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.89 E-value=4e-07 Score=101.34 Aligned_cols=277 Identities=14% Similarity=0.138 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC-CceEEEEcCCcccccccccccccCCCccccccCCCee
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG-CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH 220 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~-~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~ 220 (480)
.+.++.+.++++++.+..++-+..++|.+.|+++...+...+ +++|++.+..| ..+..++.... ...|+.
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~h-P~~~~v~~t~a--------~~~G~e 192 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVH-PQTLDVLRTRA--------EPLGIE 192 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccC-HHHHHHHHHHH--------HhCCCE
Confidence 446778888999887777888999999999966654443222 36777776665 33333222110 112444
Q ss_pred EecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCc
Q 011669 221 HALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (480)
Q Consensus 221 ~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgf 300 (480)
.+..+.. .| ++ .+++++++ -.+.+..|.+.+ +++|.++|+++|+++++|-.+..+
T Consensus 193 v~~~~~~------~d-------~~-------~~~~~~vl-vq~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al 247 (954)
T PRK05367 193 VVVGDAA------KA-------LD-------HDDVFGVL-LQYPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL 247 (954)
T ss_pred EEEecCc------cC-------CC-------cccEEEEE-EecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc
Confidence 4433321 01 10 13566654 445677888876 999999999999999999855322
Q ss_pred cccCCCcccccccCCCcceeeec--cc---cc-cCccccccccCHHHHHhhcCCCcccc---------------------
Q 011669 301 ARTGSHFWGFEAHGVVPDIVTMA--KG---IG-NGIPLGAVVTTPEIAEVLTRRNYFNT--------------------- 353 (480)
Q Consensus 301 gr~G~~~~~~~~~~~~pDivt~s--K~---~g-~G~pig~v~~~~~~~~~l~~~~~~~t--------------------- 353 (480)
+. . . .--+...|+++.+ |. +| ||-..|++.+++++...+.....+.+
T Consensus 248 ~~-l-~----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiR 321 (954)
T PRK05367 248 TL-L-T----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIR 321 (954)
T ss_pred cC-C-C----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccc
Confidence 21 1 0 1112345776543 43 22 34458899999998777653311100
Q ss_pred C---CCc---HHHHHHHHHH--HHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC
Q 011669 354 F---GGN---PVCTAAGHAV--LKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK 422 (480)
Q Consensus 354 ~---~~~---~~~~aaa~a~--L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~ 422 (480)
+ ..| ..+..+..+. +..+..+ ++.+++..+..+++++|++. .+..... ..+--+.+..
T Consensus 322 rekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~--G~~~~~~----~~f~~~~~~~----- 390 (954)
T PRK05367 322 REKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL--GLEVVHD----SFFDTLTVEV----- 390 (954)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc--CcccCCC----CCCCeEEEeC-----
Confidence 0 011 1111222222 2323333 44566777777888877653 2222211 1111111211
Q ss_pred CCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 423 TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 423 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
+ ....++.+.|+++||.+.... ++.+|++|....|++|||.++++|.
T Consensus 391 -~--~~~~~i~~~l~~~gi~~~~~~--~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 -G--GDAAAVLARALAAGINLRRVD--DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -C--CCHHHHHHHHHHCCceecccc--CCEEEEEecccCCHHHHHHHHHHHc
Confidence 1 025678999999999985432 5689999999999999999999996
No 363
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.88 E-value=7.8e-07 Score=89.76 Aligned_cols=230 Identities=17% Similarity=0.151 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHhCCCC-------CCEEEEeCCHHHHHHHHHHHHHhhc-------C----CceEEEEcCCcccccccccc
Q 011669 142 AIADFAEALASKMPGN-------LKVVFFTNSGTEANELAIMMARLYT-------G----CNDIISLRNAYHGNAAGTMG 203 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~-------~~~v~f~~sGseA~~~Alk~ar~~~-------~----~~~ii~~~~~yhG~~~~~~~ 203 (480)
...++.++|+++++.+ ...-+||+||||||..|+..||... + .+.+++....-|-...-+..
T Consensus 80 ~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 80 IEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHH
T ss_pred chHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcc
Confidence 3456667777777543 1256899999999999999998642 1 23355555545654444444
Q ss_pred cccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHcc-CCCc-eEEEEEcccCCCCcceeCCCChHHHHH
Q 011669 204 ATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG-TSGH-VAGFLSESIQGVGGIIELAPGYLPAVY 281 (480)
Q Consensus 204 ~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~-~~~~-~a~vi~epi~~~~G~~~~~~~~l~~l~ 281 (480)
..+. ++..++.... +.-| .++|++.|++. ..+. +.+|+..--....|.+-+ +++|+
T Consensus 160 ~lGl----------g~~~I~~~~~----~~md----~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~ 217 (373)
T PF00282_consen 160 ILGL----------GVRKIPTDED----GRMD----IEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIA 217 (373)
T ss_dssp HTTS----------EEEEE-BBTT----SSB-----HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHH
T ss_pred eeee----------EEEEecCCcc----hhhh----HHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHh
Confidence 4332 3444443221 1123 56777766532 1223 445555555556788876 99999
Q ss_pred HHHHHhCCEEEEcccccCccccCCCcccccccCC-Ccceeeec--cccccCccccccccCHH-HH-HhhcCC---Cc---
Q 011669 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE-IA-EVLTRR---NY--- 350 (480)
Q Consensus 282 ~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pDivt~s--K~~g~G~pig~v~~~~~-~~-~~l~~~---~~--- 350 (480)
++|++|++++++|.++.|....- +..-.-..++ ..|.+++. |.++..++.|+++.+.+ .. ..+... ..
T Consensus 218 ~i~~~~~~wlHVDaA~gg~~~~~-~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~ 296 (373)
T PF00282_consen 218 DICEKYNIWLHVDAAYGGSALLS-PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDD 296 (373)
T ss_dssp HHHHHCT-EEEEEETTGGGGGGH-CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-
T ss_pred hhccccceeeeeccccccccccc-ccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccc
Confidence 99999999999999998732211 1111111233 35777655 99988899999988764 33 333110 00
Q ss_pred --------c--ccCC-CcHHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHh
Q 011669 351 --------F--NTFG-GNPVCTAAGHAVLKVIQKDKLQNNAH---VVGSYLKERLTAL 394 (480)
Q Consensus 351 --------~--~t~~-~~~~~~aaa~a~L~~i~~~~~~~~~~---~~~~~l~~~L~~l 394 (480)
. .|+. +-.......+.+|+.+-.+.+.+.++ ++.+++.+.|++.
T Consensus 297 ~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 297 RESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 0 1222 22455556666777665665554444 4455555555543
No 364
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.85 E-value=1.4e-06 Score=85.65 Aligned_cols=297 Identities=20% Similarity=0.272 Sum_probs=180.2
Q ss_pred ChHHHHHHHHHHHhCCCCCCEE-EEeCCHHHHHHHHHHHHHhhc-----CCceEEEEcCCcccccccccccccCCCcccc
Q 011669 140 NHAIADFAEALASKMPGNLKVV-FFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFN 213 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v-~f~~sGseA~~~Alk~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~ 213 (480)
-+.+.+|.++|++..+ ++.| +--|+|++.=.+.|.+.|.|. +..+++..-.+-||.-.+..+..
T Consensus 108 l~li~~Lq~~L~~ITG--~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~-------- 177 (496)
T COG1003 108 LELIYELQEWLKEITG--MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMA-------- 177 (496)
T ss_pred HHHHHHHHHHHHHhcC--CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhc--------
Confidence 3566788888888874 4544 445789999999998888873 12344444567788776665554
Q ss_pred ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 214 VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 214 ~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
|+..+.++...++. -.+++|++.++ ++++++++...+. -|.. ++-+++|.++.+++|..|..
T Consensus 178 ----G~~VV~V~~~~~G~------VDlddLk~k~~----~~~AalMiTnPsT-~GvF---E~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 178 ----GFKVVVVKCDENGN------VDLDDLRAKAE----DNLAALMITNPST-LGVF---EEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred ----CceEEEEecCCCCC------ccHHHHHHHhc----cceeEEEeccCcc-cccc---hhhHHHHHHHHHHcCCEEEe
Confidence 34444433322222 22778887775 5788777754433 3444 23489999999999999999
Q ss_pred ccc----ccCccccCCCcccccccCCCccee------eecccccc-CccccccccCHHHHHhhcCC----C---------
Q 011669 294 DEV----QAGFARTGSHFWGFEAHGVVPDIV------TMAKGIGN-GIPLGAVVTTPEIAEVLTRR----N--------- 349 (480)
Q Consensus 294 DEv----~tgfgr~G~~~~~~~~~~~~pDiv------t~sK~~g~-G~pig~v~~~~~~~~~l~~~----~--------- 349 (480)
|-+ +-|..|.| . ++ .|++ ||+=.-|| |-..|-|.+++++...+-.. .
T Consensus 240 DGANlNA~vG~~rPG-d-~G-------~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~ 310 (496)
T COG1003 240 DGANLNAIVGLARPG-D-MG-------FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYD 310 (496)
T ss_pred cCcchhhhhcccccc-c-cc-------cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCC
Confidence 964 44555666 2 22 3444 44444454 57788888888877655431 0
Q ss_pred ------ccccCCCcHHHHHHHHHHHHHhhhhHHHH---HHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCC
Q 011669 350 ------YFNTFGGNPVCTAAGHAVLKVIQKDKLQN---NAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420 (480)
Q Consensus 350 ------~~~t~~~~~~~~aaa~a~L~~i~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~ 420 (480)
....|.||......+++-+..+-.+.+.+ ..--+.+|+..+|+. .|+++..- .. .+.=|++-+..
T Consensus 311 ~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~y~~--~~-~~~HE~ild~r 384 (496)
T COG1003 311 GKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG---YYPVPYTG--EN-RVAHECILDAR 384 (496)
T ss_pred CCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh---cCccccCC--CC-cceeEEEeech
Confidence 01234455555556666666655554432 223345677777665 33433211 11 12223322211
Q ss_pred -cCCCCHHHHHHHHHHHHHcCceeeccCc---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 421 -LKTPAKAETLYIMDKMKEMGVLVGKGGF---YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 421 -~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
.+......+..++++|++.|+.--+-.. -.+.+-|-|-=.-+++++|++++++.++.++
T Consensus 385 ~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 385 PLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred HhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1111223467899999999988644321 1367888888888999999999999877653
No 365
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.79 E-value=4.2e-07 Score=91.17 Aligned_cols=274 Identities=16% Similarity=0.154 Sum_probs=137.6
Q ss_pred eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHH
Q 011669 164 TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV 243 (480)
Q Consensus 164 ~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~l 243 (480)
..||+.||..++..... ++++|+.++... |.....-..... .+.......+..++++.... ....| .+++
T Consensus 92 p~SGs~An~av~~aLl~--pGD~Im~l~l~~-GGHlshg~~~~~--~~~~~~~~~~~~~~y~~d~~-~~~ID----~d~l 161 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLK--PGDTIMGLSLPH-GGHLSHGSSVNF--KKISASGLYFESVPYPVDPD-TGLID----YDEL 161 (399)
T ss_dssp -SSHHHHHHHHHHHHT---TT-EEEEEEGGG-T--GGGT-TTSH--SBSSHHHHHSEEEEEEB-TT-TSSB-----HHHH
T ss_pred cCCchHHHHHHHHHHHh--hcCcEEecChhh-cccccccccccc--cccccccceEEEEeeeeecC-CCeEC----HHHH
Confidence 45999999988876554 788998886443 322211110000 00000001122222221100 11123 6788
Q ss_pred HHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc-CccccCCCcccccccCCCcceeee
Q 011669 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA-GFARTGSHFWGFEAHGVVPDIVTM 322 (480)
Q Consensus 244 e~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t-gfgr~G~~~~~~~~~~~~pDivt~ 322 (480)
+++++.. +++.||+....- +-+--+++++++|++.|++|++|-.|. |+--.| .+. +-+. ..|++|+
T Consensus 162 ~~~a~~~---kPklIi~G~S~y------~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g--~~~-~P~~-~ADvvt~ 228 (399)
T PF00464_consen 162 EKLAKEH---KPKLIICGASSY------PRPIDFKRFREIADEVGAYLMADISHIAGLIAGG--LFP-NPFP-YADVVTG 228 (399)
T ss_dssp HHHHHHH-----SEEEEE-SST------SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTT--SS---GCC-TSSEEEE
T ss_pred HHHHhhc---CCCEEEECchhc------cCccCHHHHHHHHHhcCcEEEecccccccceehh--eec-Cccc-cceEEEe
Confidence 8887754 667888865432 222226999999999999999999875 442233 221 1122 2689987
Q ss_pred c--cccccCccccccccC--------------HHHHHhhcCCCccccCCCcHHHHHHHH-HHHHHhhh---hHHHHHHHH
Q 011669 323 A--KGIGNGIPLGAVVTT--------------PEIAEVLTRRNYFNTFGGNPVCTAAGH-AVLKVIQK---DKLQNNAHV 382 (480)
Q Consensus 323 s--K~~g~G~pig~v~~~--------------~~~~~~l~~~~~~~t~~~~~~~~aaa~-a~L~~i~~---~~~~~~~~~ 382 (480)
| |.|.|. +-|.|+.+ +++.+.+....+.+..+++-....+++ .+|..... .++.+++.+
T Consensus 229 sThKtl~GP-rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~ 307 (399)
T PF00464_consen 229 STHKTLRGP-RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVK 307 (399)
T ss_dssp ESSGGG-SS-S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred ecccccccc-CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 6 888653 55778888 788888876554444454444333333 23333322 255666677
Q ss_pred HHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC-------cCCCEEEE
Q 011669 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------FYGNVFRI 455 (480)
Q Consensus 383 ~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~~~~~iRi 455 (480)
+.+.|.+.|.+. .+.++.. --...++++++.... .....+.+.|.+.||.+.... .....|||
T Consensus 308 NAk~La~~L~~~--G~~v~~g-gTd~H~vlvd~~~~~-------~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRl 377 (399)
T PF00464_consen 308 NAKALAEALQER--GFKVVTG-GTDNHQVLVDLRSFG-------IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRL 377 (399)
T ss_dssp HHHHHHHHHHHT--T-EEGGG-S-SSSEEEEEGGGGT-------S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEE
T ss_pred HHHHHHHHHhhC--CcEEEEC-CCCCCeEEEEecccc-------cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEE
Confidence 777777777664 2333321 012335666653321 124556778889999985431 11256999
Q ss_pred eCCCC----CCHHHHHHHHH
Q 011669 456 TPPLC----FTKEDADYLVD 471 (480)
Q Consensus 456 ~p~~~----~t~~~id~~l~ 471 (480)
.-+.. ..++|+.++.+
T Consensus 378 GT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 378 GTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp ESHHHHHTT--HHHHHHHHH
T ss_pred CCHHHHhCCCCHHHHHHHHh
Confidence 85533 34566655443
No 366
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.74 E-value=2.9e-07 Score=92.74 Aligned_cols=231 Identities=16% Similarity=0.158 Sum_probs=121.9
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCccccccC-C
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVVQ-T 217 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~-~ 217 (480)
...+.+..+.+++.++.+ +..|.+||.|.+|..++..+.. ++++|++-+++ |-+...++-+++. +.|..+... .
T Consensus 65 ~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~--~gd~VLv~RN~-HkSv~~alil~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCR--PGDKVLVDRNC-HKSVYNALILSGAIPVYIPPEDNEY 140 (417)
T ss_dssp BTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTT--TTCEEEEETT---HHHHHHHHHHTEEEEEEEEEE-TT
T ss_pred ccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcC--CCCEEEEcCCc-HHHHHHHHHHcCCeEEEecCCcccc
Confidence 345566666667777542 4455667777888888876654 67777777766 5555556666553 333322211 2
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE---EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA---GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a---~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
|+..-..+.. | ..+.+++.|++. ++..+ +||..|.. -|.+.. +++|.++|+++++.|++|
T Consensus 141 gi~~~i~~~~----~------~~~~i~~~l~~~-p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvD 203 (417)
T PF01276_consen 141 GIIGGISPDE----F------NEEDIEEALKEH-PDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVD 203 (417)
T ss_dssp S-BEEB-GGG----G------SHHHHHHHHHHC-TTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE
T ss_pred CCccCCChhh----h------hHHHHHHHHHhC-ccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEE
Confidence 3222111100 1 036788888765 32333 66666643 366666 999999999999999999
Q ss_pred ccccCccccCCCcccccccCCCcc-------eeeec--cccccCcc-ccccccCHHH---HHhhcCC-CccccCCCcHHH
Q 011669 295 EVQAGFARTGSHFWGFEAHGVVPD-------IVTMA--KGIGNGIP-LGAVVTTPEI---AEVLTRR-NYFNTFGGNPVC 360 (480)
Q Consensus 295 Ev~tgfgr~G~~~~~~~~~~~~pD-------ivt~s--K~~g~G~p-ig~v~~~~~~---~~~l~~~-~~~~t~~~~~~~ 360 (480)
|++.+.-.-. .+ .........| +++-| |.+++ +. -+++-.+.+. .+.+... ....|-+.+-+-
T Consensus 204 EAhGah~~F~-~l-p~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~l 280 (417)
T PF01276_consen 204 EAHGAHFGFH-PL-PRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPL 280 (417)
T ss_dssp -TT-TTGGCS-GG-GTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHH
T ss_pred ccccccccCC-CC-ccchhhccCccccccceeeeechhhcccc-cccceEEEecCCCcccHHHHHHHHHHHcCCChHHHH
Confidence 9986431111 11 1123344556 77766 77653 22 2333332221 1222221 122344444444
Q ss_pred HHHHHHHHHHh-h--hhHHHHHHHHHHHHHHHHHHHh
Q 011669 361 TAAGHAVLKVI-Q--KDKLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 361 ~aaa~a~L~~i-~--~~~~~~~~~~~~~~l~~~L~~l 394 (480)
++..-.+.+.+ . .+.+.++..+....+|+.|+++
T Consensus 281 mASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 281 MASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 44444444444 2 2357788888888899988663
No 367
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.72 E-value=9.6e-06 Score=77.89 Aligned_cols=354 Identities=18% Similarity=0.206 Sum_probs=188.5
Q ss_pred CCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Q 011669 97 NGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176 (480)
Q Consensus 97 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk 176 (480)
.+..+||+.+-.++..+ ..+-..| +-++.- ...-+.....|++...+.++ .+.++-+.-|--|=..-+.
T Consensus 44 Sedv~IDLLTDSGTgam---s~~qwaa----mm~GDE--AYagsrs~~~L~~avkdifG--fq~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 44 SEDVFIDLLTDSGTGAM---TDKQWAA----MMRGDE--AYAGSRSYYALADAVKDIFG--FQYTIPTHQGRGAENILIP 112 (471)
T ss_pred ccceEEEeeccCCcccc---cHHHHHH----Hhccch--hhcccccHHHHHHHHHHhcC--ceeeeeccCCccHHHHHHH
Confidence 45689999865554322 1222222 222211 11125667789999999994 6778888877666554444
Q ss_pred HHHh---hcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCC
Q 011669 177 MARL---YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253 (480)
Q Consensus 177 ~ar~---~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~ 253 (480)
..++ .-++.+.++|++.|+-.+.+.....+.-.. +.+...........++.+.++ ++.|+++|+..+.+
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~--n~~~~ea~d~~~~~pFKGd~D------~~kLe~lidevG~~ 184 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPR--NVYVDEAFDTEVKYPFKGNFD------LEKLERLIDEVGAD 184 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCCccc--cccccccccccccCCCCCccC------HHHHHHHHHHhCcc
Confidence 4433 224567888888887777666655542211 111111112222334555544 78999999987777
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC----cc--cc-CCCccccccc--C--CCcceeee
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG----FA--RT-GSHFWGFEAH--G--VVPDIVTM 322 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg----fg--r~-G~~~~~~~~~--~--~~pDivt~ 322 (480)
++..|++.-.+|..|..+.+-.-+++++++|++||+.++.|.+-.. |- |. |-.-|.+... . -..|-.+|
T Consensus 185 nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 185 NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhhee
Confidence 7877776665555555566888899999999999999999975321 10 00 1011111100 0 02344455
Q ss_pred c-cccccCcccc-ccccCHH----HHHhhcCC----CccccCCC----cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 011669 323 A-KGIGNGIPLG-AVVTTPE----IAEVLTRR----NYFNTFGG----NPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLK 388 (480)
Q Consensus 323 s-K~~g~G~pig-~v~~~~~----~~~~l~~~----~~~~t~~~----~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~ 388 (480)
| |-=| =..+| +++.+++ +...++.. ..+.||+| ..-++|++ |..--+.+++++--+..+||.
T Consensus 265 S~KKD~-lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvG---L~e~~~~~yl~~Rv~Qv~YL~ 340 (471)
T COG3033 265 SAKKDG-LVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVG---LREGVNFDYLAHRVAQVQYLA 340 (471)
T ss_pred eccccc-eeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHH---HHHhcCcHHHHHHHHHHHHHH
Confidence 5 3111 02333 4555554 33333332 12345554 23333333 332234556666556667888
Q ss_pred HHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCHH-HHHHHH-HHHHHcCceeeccCcC---------------CC
Q 011669 389 ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKA-ETLYIM-DKMKEMGVLVGKGGFY---------------GN 451 (480)
Q Consensus 389 ~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~-~~~~~~-~~l~~~Gv~v~~~~~~---------------~~ 451 (480)
++|.+. .-|++..+- |.-..++...- -+..|... -++.++ +.-++.||-...-|.+ -+
T Consensus 341 ~~l~~~--GVpi~~paG--GHavfvda~~~-lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~e 415 (471)
T COG3033 341 DGLEEA--GVPIVQPAG--GHAVFVDAGKF-LPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAE 415 (471)
T ss_pred HHHHhc--CCeeEecCC--CceEEeehhhh-cCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchh
Confidence 888775 223222222 32223332110 00111111 123333 3334567665432211 15
Q ss_pred EEEEeCC-CCCCHHHHHHHHHHHHHHHh
Q 011669 452 VFRITPP-LCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 452 ~iRi~p~-~~~t~~~id~~l~~l~~~l~ 478 (480)
.+|+..| -+.|.+++|..++.++++.+
T Consensus 416 lvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 416 LVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred eeeEeccccccchhHHHHHHHHHHHHHh
Confidence 7899877 45699999999999988765
No 368
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.62 E-value=2e-06 Score=82.66 Aligned_cols=263 Identities=15% Similarity=0.166 Sum_probs=143.6
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhh----cCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCC
Q 011669 158 LKVVFFTNSGTEANELAIMMARLY----TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFG 233 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~----~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~ 233 (480)
-..++|.+|+|+-+++|+-..--. .+.-+|++..|-|.-+...+--.. ...|++.
T Consensus 66 gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~-s~~y~w~-------------------- 124 (363)
T PF04864_consen 66 GRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFD-SRLYKWA-------------------- 124 (363)
T ss_dssp TSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTEEEE--------------------
T ss_pred CcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhcc-ccCcccc--------------------
Confidence 467999999999999988654222 123467777777754433331111 1111111
Q ss_pred CChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccccc
Q 011669 234 ADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH 313 (480)
Q Consensus 234 ~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~ 313 (480)
.|.. ... +...++...=++..|+|+.|.... .+++.-+.-+|.|=+|- + +++-.+..
T Consensus 125 Gda~----~~~---~~~~~~~~IElVTSPNNPDG~lr~----------~V~~g~~~k~I~D~AYY-W----PhyTpI~~- 181 (363)
T PF04864_consen 125 GDAS----NFK---NSDNPSPYIELVTSPNNPDGQLRE----------AVLNGSSGKVIHDLAYY-W----PHYTPITA- 181 (363)
T ss_dssp EECC----CGT---T-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-TT--S----TTTS---S-
T ss_pred ccHH----hhc---cCCCCCCeEEEEeCCCCCcccccc----------hhcCCCCcceeeeeeee-c----ccccccCC-
Confidence 1100 000 100123555677888776654322 23345566789998873 1 12222221
Q ss_pred CCCccee--eeccccc-cCccccccccCH-HHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhh--------HHHHHHH
Q 011669 314 GVVPDIV--TMAKGIG-NGIPLGAVVTTP-EIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD--------KLQNNAH 381 (480)
Q Consensus 314 ~~~pDiv--t~sK~~g-~G~pig~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~--------~~~~~~~ 381 (480)
...-||+ |+||.-| +|-|+||.++++ ++.+.+......+|.+.+-=+|.-++..|+.+-+. ++.+.-.
T Consensus 182 ~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~ 261 (363)
T PF04864_consen 182 PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGY 261 (363)
T ss_dssp -B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHH
Confidence 1233544 8899999 899999988875 57777766666789998888888888888776431 2333333
Q ss_pred HHHHHHHHHHHHhHHhcCce-------------e-eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccC
Q 011669 382 VVGSYLKERLTALKDKYGII-------------G-DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG 447 (480)
Q Consensus 382 ~~~~~l~~~L~~l~~~~~~~-------------~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~ 447 (480)
+.-+...++|+++...-... . .......+.|+....++ ...+...|++.||+.+.|.
T Consensus 262 ~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---------d~DC~~~l~~~~I~tr~G~ 332 (363)
T PF04864_consen 262 STMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---------DEDCYAVLREAKIITRSGV 332 (363)
T ss_dssp HHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG---------GSSHHHHHHCTTEEEEEGG
T ss_pred HHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc---------cccHHHHHHhCCcccCCCC
Confidence 33333334444443322111 1 12344678888875432 1346777888999998885
Q ss_pred cCC---CEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 448 FYG---NVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 448 ~~~---~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
.|+ .++||+ +..++++.|.++++|..
T Consensus 333 ~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 333 LFGADSRYVRLS--MLKRDDDFDQLLERLSK 361 (363)
T ss_dssp GGTS-TTEEEEE--SSS-HHHHHHHHHHHHC
T ss_pred ccCCCCCeEEEe--ccCCHHHHHHHHHHHHh
Confidence 554 799999 89999999999999975
No 369
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.57 E-value=1.1e-05 Score=86.48 Aligned_cols=307 Identities=12% Similarity=0.008 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccccc-ccccccC-CCcccccc-CCC
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG-TMGATAQ-SNWKFNVV-QTG 218 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~-~~~~~~~-~~~~~~~~-~~g 218 (480)
.+.+-.+..++.++.+ +..|++||.|.+|..++..+.. +++.|++-+++ |-+... ++.+++. +.|-.+.. ..|
T Consensus 175 ~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~--~Gd~VLvdRN~-HKSv~hgaLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 175 AAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLT--PGDLVLFDRNN-HKSNHHGALIQAGATPVYLETARNPFG 250 (720)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcC--CCCEEEeeccc-HHHHHHHHHHHcCCeEEEeeccccccC
Confidence 3444444555556543 5567788888888888876543 56677766665 544443 3555542 33322111 011
Q ss_pred eeEecCCCCcCCCCCCChHH-HHHHHHHHHHccCCC------c-eEEEEEcccCCCCcceeCCCChHHHHHHH-HHHhCC
Q 011669 219 VHHALNPDPYRGVFGADGEM-YAKDVQDLIDFGTSG------H-VAGFLSESIQGVGGIIELAPGYLPAVYKS-IKKAGG 289 (480)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~-~~~~le~~i~~~~~~------~-~a~vi~epi~~~~G~~~~~~~~l~~l~~l-~~~~gi 289 (480)
+..- .+.+. ..+.+++.|++..++ . .++||..|.. .|.+.. +++|.++ |++++
T Consensus 251 i~g~-----------I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~- 312 (720)
T PRK13578 251 FIGG-----------IDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD- 312 (720)
T ss_pred CcCC-----------CChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-
Confidence 1110 01110 034577777654221 2 3455555533 355555 8999998 68888
Q ss_pred EEEEcccccCccccCCCc--ccccccCCCcc----eeeec--cccccCccc-cccccCHHHH---------HhhcCCC-c
Q 011669 290 LCIADEVQAGFARTGSHF--WGFEAHGVVPD----IVTMA--KGIGNGIPL-GAVVTTPEIA---------EVLTRRN-Y 350 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~--~~~~~~~~~pD----ivt~s--K~~g~G~pi-g~v~~~~~~~---------~~l~~~~-~ 350 (480)
.|++||++.+.-+-.+.+ +.-......+| ++|=| |.+++ +-- +++-.+...+ +.+.... .
T Consensus 313 ~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m 391 (720)
T PRK13578 313 YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNNAFML 391 (720)
T ss_pred cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHHHHHH
Confidence 999999986542222110 11011233566 66655 76653 222 2333322111 1222111 1
Q ss_pred cccCCCcHHHHHHHHHH-HHHhh---hhHHHHHHHHHHHHHHHHHHHhHHhcCcee--eEe-------------------
Q 011669 351 FNTFGGNPVCTAAGHAV-LKVIQ---KDKLQNNAHVVGSYLKERLTALKDKYGIIG--DVR------------------- 405 (480)
Q Consensus 351 ~~t~~~~~~~~aaa~a~-L~~i~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--~v~------------------- 405 (480)
..|-+.+ ....|.+.+ -..++ .+.+.+...+....+|+.|.+....+..+. .+.
T Consensus 392 ~qSTSPs-Y~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 392 HASTSPF-YPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred HcCCChH-HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 1222222 222233322 22222 235667777777777777733222221110 000
Q ss_pred ---------ccc-----e-e-----EEEEEecCCCc---C--CCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCC
Q 011669 406 ---------GRG-----F-L-----LGVEFVTDRQL---K--TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLC 460 (480)
Q Consensus 406 ---------g~g-----~-~-----~~i~~~~~~~~---~--~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~ 460 (480)
|.. . + +.+.. .+.. . ...+.-...+.+.|.++||.+-..+ .+.+-+..+..
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g 546 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD--LNSILFLLTPA 546 (720)
T ss_pred ccccCccccccccccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC--CCeEEEEeCCC
Confidence 000 0 0 00111 0000 0 0000014567788888899997765 34555666778
Q ss_pred CCHHHHHHHHHHHHHH
Q 011669 461 FTKEDADYLVDVMDYS 476 (480)
Q Consensus 461 ~t~~~id~~l~~l~~~ 476 (480)
.|+++++.++++|.++
T Consensus 547 ~t~~~~~~Lv~aL~~f 562 (720)
T PRK13578 547 EDMAKLQQLVAMLARF 562 (720)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999865
No 370
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.53 E-value=3.8e-05 Score=82.38 Aligned_cols=306 Identities=13% Similarity=0.116 Sum_probs=153.4
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCcccccc-CCC
Q 011669 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVV-QTG 218 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~g 218 (480)
....+..+..++.++.+ +..|.+||.|.+|..++..+.. +++.|++-+++ |-+...++.+++. +.|-.+.. ..|
T Consensus 195 G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~-HKSv~~aLilsga~PVYl~P~~n~~G 270 (713)
T PRK15399 195 GPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAP--AGSTLLIDRNC-HKSLAHLLMMSDVVPIWLKPTRNALG 270 (713)
T ss_pred hHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcC--CCCEEEeeccc-HHHHHHHHHHcCCeeEEecccccccC
Confidence 34445555555667543 4566777778888888876543 56666666555 5555556666653 33322111 112
Q ss_pred eeEecCCCCcCCCCCCChHHHHHHHHHHHHccCC--CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEE-EEcc
Q 011669 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS--GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC-IADE 295 (480)
Q Consensus 219 ~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~--~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gill-I~DE 295 (480)
+..-..+. ....+.+++.+++... ...++||..|.. .|.+.. +++|.++| |+.+ ++||
T Consensus 271 i~g~I~~~----------~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDE 331 (713)
T PRK15399 271 ILGGIPRR----------EFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDS 331 (713)
T ss_pred CcCCCChh----------hccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEec
Confidence 11100000 0013678888875421 114677776633 365654 78888888 6766 5999
Q ss_pred cccCccccCCCc---ccccccCCCccee---eec--cccccCcc-ccccccCH-----HHHHhhcCCCccccCCCcHHHH
Q 011669 296 VQAGFARTGSHF---WGFEAHGVVPDIV---TMA--KGIGNGIP-LGAVVTTP-----EIAEVLTRRNYFNTFGGNPVCT 361 (480)
Q Consensus 296 v~tgfgr~G~~~---~~~~~~~~~pDiv---t~s--K~~g~G~p-ig~v~~~~-----~~~~~l~~~~~~~t~~~~~~~~ 361 (480)
++.+.-+-.+.+ .+.. .+-.+|.+ |=| |.+++ +- -+++-.+. .+.+.+. ...|-+.+-+-+
T Consensus 332 Ahgah~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~---m~~STSPsY~Lm 406 (713)
T PRK15399 332 AWVPYTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFM---MHTSTSPSYPIV 406 (713)
T ss_pred cchhhhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHH---HHcCCCcHHHHH
Confidence 987542222111 1111 11145766 434 77753 21 12222221 1222221 112333332222
Q ss_pred HHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhHHhc-CceeeEec------cc-----------------------
Q 011669 362 AAGHAVLKVIQ---KDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRG------RG----------------------- 408 (480)
Q Consensus 362 aaa~a~L~~i~---~~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~~v~g------~g----------------------- 408 (480)
|..-.+...++ .+.+.++..+....+|+.|.++.... ++...+.+ ..
T Consensus 407 ASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~l 486 (713)
T PRK15399 407 ASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFL 486 (713)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccC
Confidence 22222333333 24566777888888888887764311 11001100 00
Q ss_pred --eeEEEEEecC--CCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 409 --FLLGVEFVTD--RQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 409 --~~~~i~~~~~--~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
+-+.+....- .......+.....+.+.|.++||.+-..+ .+.+-+..+...|+++++.++++|.+.
T Consensus 487 DP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 487 DPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG--PYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred CCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0001111000 00000111224567788899999997765 345666777889999999999998765
No 371
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.47 E-value=6.6e-05 Score=82.79 Aligned_cols=278 Identities=14% Similarity=0.123 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC-CceEEEEcCCcccccccccccccCCCccccccCCCee
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG-CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH 220 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~-~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~ 220 (480)
.+-++-..++++++-+..+.-+..++|.+-|++++..+...+ +++|++.+.. |..+...+... ....|+.
T Consensus 110 ~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~-hP~~~~v~~t~--------a~~~g~~ 180 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDL-HPQTKSVLHTR--------AKPFGIE 180 (939)
T ss_pred HHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCC-CcchHHHHHHH--------HHhcCcE
Confidence 445777888888865555556777888888865554443222 3566665544 44333322211 1113444
Q ss_pred EecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCc
Q 011669 221 HALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (480)
Q Consensus 221 ~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgf 300 (480)
.+.. | .++|++.+ +++++++.. ++..|.+.. +++|.++++++|+++|++--...+
T Consensus 181 v~~~----------~----~~~l~~~~------~~~~v~~q~-Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 181 VIVV----------D----CSDIKKAV------DVFGCLLQY-PATDGSILD----YKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred EEEE----------c----HHHHhhcC------CEEEEEEEC-CCCCeEEec----HHHHHHHHHHcCCEEEEEechHHh
Confidence 4332 1 23444332 466666643 345576653 899999999999999986544322
Q ss_pred cccCCCcccccccCCCcceee-eccccc-----cCccccccccCHHHHHhhcCCCcc-----------------------
Q 011669 301 ARTGSHFWGFEAHGVVPDIVT-MAKGIG-----NGIPLGAVVTTPEIAEVLTRRNYF----------------------- 351 (480)
Q Consensus 301 gr~G~~~~~~~~~~~~pDivt-~sK~~g-----~G~pig~v~~~~~~~~~l~~~~~~----------------------- 351 (480)
+-.- . -. +...||++ .+|.|| ||--.|++.+++++...+..+..+
T Consensus 236 ~ll~-~---Pg--e~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIr 309 (939)
T TIGR00461 236 TLLT-P---PG--HYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIR 309 (939)
T ss_pred CCcC-C---HH--HcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeeccccccccc
Confidence 2110 0 01 22356652 335554 354578888888887766433111
Q ss_pred -----ccCCCcHHHHHHHHH-HHHHhhhhH---HHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC
Q 011669 352 -----NTFGGNPVCTAAGHA-VLKVIQKDK---LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK 422 (480)
Q Consensus 352 -----~t~~~~~~~~aaa~a-~L~~i~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~ 422 (480)
+.++.+...++...+ -+..+-.+. +.+++..+..++.++|.+. .+..+.. ..|--+.+.-+.
T Consensus 310 RekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~--G~~~~~~----~fF~~~~v~~~~--- 380 (939)
T TIGR00461 310 RDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND--PHELINK----TWFDTLTVKVGN--- 380 (939)
T ss_pred ccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCC----CccceEEEEeCC---
Confidence 111122222221111 123333333 3455666677777777663 2222211 222222221110
Q ss_pred CCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 423 TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 423 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
....++.+.++++||.++... ++.++++.--.+|++||+.+++.|.
T Consensus 381 ----~~~~~i~~~~~~~gi~l~~~~--~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 381 ----GISSELLKAAEEFNINLRAVD--TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ----CCHHHHHHHHHHCCCeeeecC--CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 015678899999999987643 4689999999999999999999984
No 372
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.46 E-value=7.2e-05 Score=80.32 Aligned_cols=305 Identities=13% Similarity=0.124 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCcccccc-CCCe
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVV-QTGV 219 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~-~~g~ 219 (480)
.+.+..+..++.++.+ +..|.+||.|.+|..++..+. ++++.|++-+++ |-+...++.+++. +.|-.+.. ..|+
T Consensus 196 ~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~--~~Gd~VLvdRN~-HKSv~haLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 196 PHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSA--PAGSTVLIDRNC-HKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred HHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhc--CCCCEEEeeccc-HHHHHHHHHHcCCeEEEecccccccCC
Confidence 3444545555556543 456667777888887777554 356666665555 5656666666653 22222110 1111
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccCC--CceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS--GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~--~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 297 (480)
..-..+. .| + .+.+++.++.... ...++||..|.. .|.+.. +++|.++|+.++ +++||++
T Consensus 272 ~g~I~~~----~~--~----~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 272 LGGIPQS----EF--Q----HATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred ccCCCcc----cc--C----HHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccc
Confidence 1100000 01 1 4677777765421 122577777733 355654 899999999887 6899998
Q ss_pred cCccccCCCcc----cccccCCCc-c--eeeec--cccccCccc-ccccc----C-HHHHHhhcCCCccccCCCcHHHHH
Q 011669 298 AGFARTGSHFW----GFEAHGVVP-D--IVTMA--KGIGNGIPL-GAVVT----T-PEIAEVLTRRNYFNTFGGNPVCTA 362 (480)
Q Consensus 298 tgfgr~G~~~~----~~~~~~~~p-D--ivt~s--K~~g~G~pi-g~v~~----~-~~~~~~l~~~~~~~t~~~~~~~~a 362 (480)
.+.-+-. ..+ +.. .+-.+ | ++|=| |.+++ +-- +++-. . +.+.+.+. ...|-+.+-+-+|
T Consensus 334 gah~~F~-p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~---m~~STSPsY~l~A 407 (714)
T PRK15400 334 VPYTNFS-PIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM---MHTTTSPHYGIVA 407 (714)
T ss_pred hhhhccC-cccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH---HHcCCCcHHHHHH
Confidence 7642222 111 111 12211 3 55545 76653 211 12211 1 11222221 1123333322222
Q ss_pred HHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhc-CceeeEe--------------------ccc----------
Q 011669 363 AGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKY-GIIGDVR--------------------GRG---------- 408 (480)
Q Consensus 363 aa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~~v~--------------------g~g---------- 408 (480)
..-.+...++. +.+.++..+....+|+.|.++.... ++...+. |..
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 22233333332 3566777778888888887764210 0001110 000
Q ss_pred -eeEEEEEecCCCcC--CCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 409 -FLLGVEFVTDRQLK--TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 409 -~~~~i~~~~~~~~~--~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
+-+.+....-..+. ...+.....+.+.|.++||.+-..+ .+.+-+..+...|+++++.++++|.++
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d--~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00011110000000 0011124567778889999997765 355667777889999999999998765
No 373
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.45 E-value=1.8e-05 Score=78.13 Aligned_cols=223 Identities=16% Similarity=0.117 Sum_probs=129.2
Q ss_pred CHHHHHHHHHHHHhcccc-cc---ccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcC
Q 011669 117 HPYVVDSIVNQIKRIQHS-TV---LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192 (480)
Q Consensus 117 ~p~v~~A~~~~~~~~~~~-~~---~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~ 192 (480)
+|++++++.+.+.....- +. ...-+-...+++.++... +.+.+..+|.-+-|+.+++-..- .+.++|+..+
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~--~aea~~ivnnn~aAVll~~~al~---~~~EvVis~g 114 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT--GAEAAAIVNNNAAAVLLTLNALA---EGKEVVVSRG 114 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc--chhheeeECCcHHHHHHHHhhhc---cCCeEEEEcc
Confidence 589999998877653211 00 111122234555555444 24567788888888887765332 2334444322
Q ss_pred ----CcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCc
Q 011669 193 ----AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (480)
Q Consensus 193 ----~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G 268 (480)
++|-.....+.. .|+..+.+-+.- .....+++.+|.... ....-+..+..+-.|
T Consensus 115 ~lV~gg~~~v~d~~~~------------aG~~l~EvG~tn--------~t~~~d~~~AIne~t--a~llkV~s~~~~f~~ 172 (395)
T COG1921 115 ELVEGGAFRVPDIIRL------------AGAKLVEVGTTN--------RTHLKDYELAINENT--ALLLKVHSSNYGFTG 172 (395)
T ss_pred ccccCCCCChhHHHHH------------cCCEEEEecccC--------cCCHHHHHHHhccCC--eeEEEEeeccccccc
Confidence 333333333333 244444332211 112578888886421 122223344445555
Q ss_pred ceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeec--cccccCccccccccCHHHHHhhc
Q 011669 269 IIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTTPEIAEVLT 346 (480)
Q Consensus 269 ~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~~~~~~~l~ 346 (480)
.+. ++++.++|++||+++|+|..-...-+ - .+--.+.....+|+|+|| |-|+ |.+.|.+++++++++.+.
T Consensus 173 ~l~-----~~~l~~ia~~~~lpvivD~aSg~~v~-~-e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~lq 244 (395)
T COG1921 173 MLS-----EEELVEIAHEKGLPVIVDLASGALVD-K-EPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKLQ 244 (395)
T ss_pred ccc-----HHHHHHHHHHcCCCEEEecCCccccc-c-ccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHHH
Confidence 554 88999999999999999986422211 0 111122345578999998 7665 446788999999998887
Q ss_pred CCCccccCCCcHHHHHHHHHHHHHhhhh
Q 011669 347 RRNYFNTFGGNPVCTAAGHAVLKVIQKD 374 (480)
Q Consensus 347 ~~~~~~t~~~~~~~~aaa~a~L~~i~~~ 374 (480)
.....-.+-......++..++|+.....
T Consensus 245 ~~~l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 245 SHPLKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred hhhhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 6554445556677788888888876653
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.45 E-value=7.2e-05 Score=79.51 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=88.6
Q ss_pred HHHHHHHHHcc--CCCceEEEEEcccCCCCcceeCCCChHHHHHHHH---HHhCC--EEEEcccccCcccc---C-C-Cc
Q 011669 240 AKDVQDLIDFG--TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI---KKAGG--LCIADEVQAGFART---G-S-HF 307 (480)
Q Consensus 240 ~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~---~~~gi--llI~DEv~tgfgr~---G-~-~~ 307 (480)
.+.|++.|++. ....+.+|+..--..+.|.+-| +++|.++| +++|+ ++++|.+|.|+.+. . . .+
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~ 337 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNF 337 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccc
Confidence 56676666531 1224556666555556688877 99999998 67898 69999999986421 0 0 00
Q ss_pred cc-------------c-------------cccCC-Ccceeeec--cccccCccccccccCHH-HHHhhcCCC-----cc-
Q 011669 308 WG-------------F-------------EAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE-IAEVLTRRN-----YF- 351 (480)
Q Consensus 308 ~~-------------~-------------~~~~~-~pDivt~s--K~~g~G~pig~v~~~~~-~~~~l~~~~-----~~- 351 (480)
.. + ...++ ..|.+|+. |.+.-.++.|+++.+.. +.+.+.... ..
T Consensus 338 ~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~ 417 (608)
T TIGR03811 338 IPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA 417 (608)
T ss_pred cccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc
Confidence 00 0 01122 35777765 88777889998888754 444332110 00
Q ss_pred --------ccCCCcH--HHHHHHHHHHHHh--hhh---HHHHHHHHHHHHHHHHHHHh
Q 011669 352 --------NTFGGNP--VCTAAGHAVLKVI--QKD---KLQNNAHVVGSYLKERLTAL 394 (480)
Q Consensus 352 --------~t~~~~~--~~~aaa~a~L~~i--~~~---~~~~~~~~~~~~l~~~L~~l 394 (480)
.+..++. ...++.+.+++.+ ..+ .+.++..+..+++.+.|++.
T Consensus 418 ~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 418 DIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred cCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1222332 3355566777776 333 45566666777777777764
No 375
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.44 E-value=0.0002 Score=70.78 Aligned_cols=285 Identities=19% Similarity=0.212 Sum_probs=158.6
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEec
Q 011669 144 ADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHAL 223 (480)
Q Consensus 144 ~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (480)
-++-..++++.+-+..+.-.-..+|-+-|+++..-|....+.+-+.....-|-.+..++..... ..|+..+.
T Consensus 123 fefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~--------~~g~~i~~ 194 (450)
T COG0403 123 FEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAE--------GLGIEIEV 194 (450)
T ss_pred HHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcc--------cCceEEEE
Confidence 3555566777754444444555677666666655454333334444456666666666544322 13555543
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE--cccccCcc
Q 011669 224 NPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA--DEVQAGFA 301 (480)
Q Consensus 224 ~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~--DEv~tgfg 301 (480)
.+. +| .+++++. + .+++.+++++-.+..|+.... +++|.+.++++|+++|+ |=+--++-
T Consensus 195 ~~~-------~d----~~~l~~~-~---~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL 255 (450)
T COG0403 195 VDA-------DD----LDDLESA-D---DGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLL 255 (450)
T ss_pred ecc-------ch----hhhhhhc-c---ccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhcc
Confidence 321 11 4555555 2 348999999877655534433 89999999999999884 43322221
Q ss_pred -ccCCCcccccccCCCcceee-----eccccc-cCccccccccCHHHHHhhcCCCcc-----------------------
Q 011669 302 -RTGSHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRRNYF----------------------- 351 (480)
Q Consensus 302 -r~G~~~~~~~~~~~~pDivt-----~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~----------------------- 351 (480)
..| ....||++ |+=.++ ||--.|+..++++++..+-.+..+
T Consensus 256 ~pPG---------e~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIR 326 (450)
T COG0403 256 KPPG---------EFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIR 326 (450)
T ss_pred CCcc---------ccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHh
Confidence 111 12346653 666666 677788899999987666543211
Q ss_pred -----ccCCCcHHHHHHHHHHHHH-hhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcC
Q 011669 352 -----NTFGGNPVCTAAGHAVLKV-IQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK 422 (480)
Q Consensus 352 -----~t~~~~~~~~aaa~a~L~~-i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~ 422 (480)
+..+.|..-++.+.+..-. +-.+ ++.+++.++..++.++|++....+ .+.....|.-+.+.-
T Consensus 327 ReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~----~~~~~~fFdt~~v~~----- 397 (450)
T COG0403 327 REKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGV----ELVFDHFFDTFTVRV----- 397 (450)
T ss_pred hhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCce----EeccccceeeEEEec-----
Confidence 2233343222222222211 1222 345666667777777777652211 122222232222211
Q ss_pred CCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 423 TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 423 ~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
+. .....+.++....|+-++.-. ...+-|+.-=.+|+++|+.+++.+....
T Consensus 398 -~~-~~~~~l~~~~~~~G~~L~~~~--~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 398 -PE-EVAEALLAAAIAGGINLRRVD--ADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred -ch-hHHHHHHHHHHhcCCceeeec--CCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 11 234556677777888887543 3356677666788999999999987654
No 376
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.35 E-value=7.1e-05 Score=73.56 Aligned_cols=307 Identities=17% Similarity=0.194 Sum_probs=156.7
Q ss_pred HHHHHHHHhCCCCC-CEEEEeCCHHHHHHHHHHHHHhh--cC---------CceEEEEcCCcccccccccccccCCCccc
Q 011669 145 DFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLY--TG---------CNDIISLRNAYHGNAAGTMGATAQSNWKF 212 (480)
Q Consensus 145 ~l~e~L~~~~~~~~-~~v~f~~sGseA~~~Alk~ar~~--~~---------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 212 (480)
+.-.++.+..+... ..-+|+++|+-+|..|+..||.. ++ ..-|+..+---|-+..-+....+-+
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~g---- 220 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLG---- 220 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccC----
Confidence 33344444443322 24579999999999999999852 11 1223333333332222211111110
Q ss_pred cccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccC-CCceEEEEEcccCCC--CcceeCCCChHHHHHHHHHHhCC
Q 011669 213 NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-SGHVAGFLSESIQGV--GGIIELAPGYLPAVYKSIKKAGG 289 (480)
Q Consensus 213 ~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~-~~~~a~vi~epi~~~--~G~~~~~~~~l~~l~~l~~~~gi 289 (480)
...+..+ +...++. ...++||+.|.... ++-+ -++++..-|+ -|.+-+ |..|+++|++|+.
T Consensus 221 ---td~c~~v--~t~e~Gk------m~~~dLe~kile~k~kg~~-Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~l 284 (510)
T KOG0629|consen 221 ---TDHCIKV--KTDERGK------MIPDDLEKKILEAKAKGGV-PFFVNATAGTTVLGAFDD----LNGIADICEKHKL 284 (510)
T ss_pred ---CceeEEe--cccccCc------cchHHHHHHHHHHHhcCCC-CeEEEecCCceeeeccCc----HHHHHHHHHhcCE
Confidence 0122222 2222222 22678887765321 1112 2344444343 355555 9999999999999
Q ss_pred EEEEcccccCccccCCCcccc----cccCC-Ccceeeec--cccccCccccccccCHH-HHHhhcCCC---------cc-
Q 011669 290 LCIADEVQAGFARTGSHFWGF----EAHGV-VPDIVTMA--KGIGNGIPLGAVVTTPE-IAEVLTRRN---------YF- 351 (480)
Q Consensus 290 llI~DEv~tgfgr~G~~~~~~----~~~~~-~pDivt~s--K~~g~G~pig~v~~~~~-~~~~l~~~~---------~~- 351 (480)
++++|.+..| | -+.+. ...|+ ..|.++.. |-+|..++.++.+.+.+ +.+...+.. +.
T Consensus 285 WmHvDAAwGG----g-lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Yd 359 (510)
T KOG0629|consen 285 WMHVDAAWGG----G-LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYD 359 (510)
T ss_pred EEEeeccccc----c-cccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceee
Confidence 9999998755 1 11111 22344 34677765 99999999999999876 444443321 00
Q ss_pred ccCC-CcHHHH-------HHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCC-
Q 011669 352 NTFG-GNPVCT-------AAGHAVLKVIQK---DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR- 419 (480)
Q Consensus 352 ~t~~-~~~~~~-------aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~- 419 (480)
.+|. ++-..+ .-.+-.++.--. +...++.-++.+|+.++|++... +..+....+.-.-+.+.++...
T Consensus 360 vS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~-~~~l~~~~pe~~nv~fw~vp~~l 438 (510)
T KOG0629|consen 360 VSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREG-FEMLFELEPEHVNVCFWYVPPSL 438 (510)
T ss_pred cccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccc-ceehhcCCCceEEEeeccCchHh
Confidence 1111 111111 111111111011 34567777888899988887532 1111111111111122222211
Q ss_pred --CcCCCCHH-----HHHHHHHHHHHcCceee---ccCcCCCEEEE--eCCCCCCHHHHHHHHHHHHHHHh
Q 011669 420 --QLKTPAKA-----ETLYIMDKMKEMGVLVG---KGGFYGNVFRI--TPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 420 --~~~~~~~~-----~~~~~~~~l~~~Gv~v~---~~~~~~~~iRi--~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
....+... .+-.+...|.++|.... |.+...+++|+ ++| +.+.+|+|.+++.|++.=+
T Consensus 439 R~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 439 RGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred ccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHhcc
Confidence 01111111 12346677888886543 34445577775 444 6799999999999987643
No 377
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.31 E-value=6.2e-07 Score=87.61 Aligned_cols=229 Identities=17% Similarity=0.155 Sum_probs=55.0
Q ss_pred ccCCCC--CHHHHHHHHHHHHhccccc---cccCChH-HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCC
Q 011669 111 VCCGHC--HPYVVDSIVNQIKRIQHST---VLYLNHA-IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC 184 (480)
Q Consensus 111 ~~lGh~--~p~v~~A~~~~~~~~~~~~---~~~~~~~-~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~ 184 (480)
.|||-+ ++++.+++.+.+..+..-- ..+-... ...+.+.|+... +.+..+++|+.+.|+.+++..... ++
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--gAeaA~VvNnnaAAv~L~l~~la~--~~ 86 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--GAEAALVVNNNAAAVLLALNTLAK--GK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc--cc
Confidence 456654 4778888877665431100 0000001 123444555555 346678889988888887764322 33
Q ss_pred ceEEEEcCCcccccccccccccCCCcccc--ccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEE-EEc
Q 011669 185 NDIISLRNAYHGNAAGTMGATAQSNWKFN--VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF-LSE 261 (480)
Q Consensus 185 ~~ii~~~~~yhG~~~~~~~~~~~~~~~~~--~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~v-i~e 261 (480)
+||+..|--- -. + ..++.+ +...|...+.+-. ......+|++++|. ++++++ .+-
T Consensus 87 -EvIvsRGelV-------ei-G-gsFRip~vm~~sGa~lvEVGt--------tN~t~~~Dye~AI~----e~Ta~ll~Vh 144 (367)
T PF03841_consen 87 -EVIVSRGELV-------EI-G-GSFRIPDVMRQSGARLVEVGT--------TNRTHLSDYEKAIT----ENTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cccccccccc-------cc-c-ccccccccccccccccccccc--------cccccccccccccc----cccccccccc
Confidence 4444332210 00 0 011111 1113333332211 11222567788875 356555 444
Q ss_pred c----cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC------ccccCCCcccccccCCCcceeeec--cccccC
Q 011669 262 S----IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG------FARTGSHFWGFEAHGVVPDIVTMA--KGIGNG 329 (480)
Q Consensus 262 p----i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg------fgr~G~~~~~~~~~~~~pDivt~s--K~~g~G 329 (480)
+ ++|-.+.+ + ++++.+++++||+++|.|---.. +|..+ +.-..+......|+|||| |-+||.
T Consensus 145 ~Sn~~i~GFt~~~-~----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~~GaDlV~fSGdKlLGGP 218 (367)
T PF03841_consen 145 TSNFRIQGFTGEV-S----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLAAGADLVTFSGDKLLGGP 218 (367)
T ss_dssp ---------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTSSSSS-
T ss_pred ccccccccccccc-c----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhhcCCCEEEEECCCcCCCC
Confidence 2 23333333 2 89999999999999999965311 12222 111123344568999998 777653
Q ss_pred ccccccccCHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhh
Q 011669 330 IPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQ 372 (480)
Q Consensus 330 ~pig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~ 372 (480)
..|.+++++++++.++.....-.+-..-+..++..++|+...
T Consensus 219 -QaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 219 -QAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp -S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--
T ss_pred -CeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHH
Confidence 468899999999988764444455567788888888887654
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.29 E-value=0.00015 Score=73.32 Aligned_cols=276 Identities=19% Similarity=0.218 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCC-ceEEEEcCCcccccccccccccCCCccccccCCCee
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH 220 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~-~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~ 220 (480)
.+-++-..++++.+-+.-++-+-.+++.+-|+++.+.|....+ ++|++.+ +-|+.+..++..... ..|+.
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~-~~hP~~~~v~~t~a~--------~~g~~ 181 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPE-SLHPQTRAVLRTYAA--------PLGIE 181 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEET-TS-CHHHHHHHHHCC--------HCCEE
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcC-CcChhhHHHHHHhhh--------hCCeE
Confidence 4567888888888433222234456666666554444443332 3666654 456655554432211 12555
Q ss_pred EecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc----
Q 011669 221 HALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV---- 296 (480)
Q Consensus 221 ~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv---- 296 (480)
.+..+....+ .+ + .+++++|++...+.- |.+.. +++|.++++++|+++|+ -+
T Consensus 182 iv~~~~~~~~---~~------d---------~~~~a~v~vq~Pn~~-G~~ed----~~~i~~~~h~~gal~~~-~ad~~a 237 (429)
T PF02347_consen 182 IVEVPLDEDG---TT------D---------DDDTAAVMVQNPNTF-GVFED----IKEIADIAHAAGALVIV-GADPNA 237 (429)
T ss_dssp EEEE-BBTTC---SB----------------STTEEEEEEESS-TT-SB--T----HHHHHHHHHHTT-EEEE-CGGCCG
T ss_pred EEEecccccC---Cc------c---------ccCeEEEEeecCCCC-ceEee----HHHHHHHHHHcCCEEEE-ecCHHH
Confidence 5544321100 00 1 358999999876644 55543 99999999999999986 22
Q ss_pred ccCccccCCCcccccccCCCcceee-eccccc-----cCccccccccCHHHHHhhcCCCc--------------------
Q 011669 297 QAGFARTGSHFWGFEAHGVVPDIVT-MAKGIG-----NGIPLGAVVTTPEIAEVLTRRNY-------------------- 350 (480)
Q Consensus 297 ~tgfgr~G~~~~~~~~~~~~pDivt-~sK~~g-----~G~pig~v~~~~~~~~~l~~~~~-------------------- 350 (480)
..++-+.| .+ ..||++ .+|.|| ||--.|++.++++++..+-.+..
T Consensus 238 L~~l~~Pg-------e~--GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtRE 308 (429)
T PF02347_consen 238 LGGLKSPG-------EY--GADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTRE 308 (429)
T ss_dssp CCTC--GG-------GG--T-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGT
T ss_pred HhCcCChh-------hc--CccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccc
Confidence 11111111 12 346663 356665 45668889999988776643211
Q ss_pred --------cccCCCcHHHHH-HHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecC
Q 011669 351 --------FNTFGGNPVCTA-AGHAVLKVIQKD---KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD 418 (480)
Q Consensus 351 --------~~t~~~~~~~~a-aa~a~L~~i~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~ 418 (480)
.+.++.|..-++ ++..-+..+-.+ ++.+++..+..++.++|.++ -..+. .+.-++-.+.. ..
T Consensus 309 QHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~----~~~~f~e~v~~-~~ 382 (429)
T PF02347_consen 309 QHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPF----DNPFFFEFVVV-FS 382 (429)
T ss_dssp CHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECS----SSSSBSSEEEE-ES
T ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCccc----CCCCceeeeee-cC
Confidence 133444543333 222223333333 34566667777888887775 11111 11111111111 11
Q ss_pred CCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHH
Q 011669 419 RQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473 (480)
Q Consensus 419 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l 473 (480)
+. ....++.+.+...|+..... ..+.+-+++-=..|++|||.++++|
T Consensus 383 -----~~-~~~~~l~~~~~~~gl~~~~~--~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 383 -----KD-KEVEELLKRGIEGGLNLRYP--DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -----S--HHHHHHHHTT----EEEGGG---SSEEEEE--TT--HHHHHHHHH--
T ss_pred -----Cc-HHHHHHHHHHHhcCCCcccc--CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 11 23344666666667444322 2457889988889999999999875
No 379
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00023 Score=67.18 Aligned_cols=333 Identities=18% Similarity=0.117 Sum_probs=179.8
Q ss_pred ccCCCCCHHHHHHHHHHHHhc------cccccccCCh-HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhc-
Q 011669 111 VCCGHCHPYVVDSIVNQIKRI------QHSTVLYLNH-AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT- 182 (480)
Q Consensus 111 ~~lGh~~p~v~~A~~~~~~~~------~~~~~~~~~~-~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~- 182 (480)
++||--+..+.+.+.+.+++- +|...--+.- .-+.+...++...+...++|-++||=|--+...|-...+-|
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTe 153 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTE 153 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcc
Confidence 467877777888888777752 2322111100 01223344555566666778888887744443333333333
Q ss_pred CCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHH--HHHHHHHHHHccCCCceEEEEE
Q 011669 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM--YAKDVQDLIDFGTSGHVAGFLS 260 (480)
Q Consensus 183 ~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~--~~~~le~~i~~~~~~~~a~vi~ 260 (480)
.|.+|+.-..+|.....+.-+-...... .+...+..+. | | .++. -.+++-+.|+.. .+.+|.|+.
T Consensus 154 kR~KILlE~kaFPSDhYAiesQ~~lhG~---~~e~sm~~ie-P---R-----EGEetlRteDILd~IEkn-gDeiA~v~f 220 (465)
T KOG3846|consen 154 KRFKILLEKKAFPSDHYAIESQCKLHGI---SPENSMIQIE-P---R-----EGEETLRTEDILDTIEKN-GDEIALVCF 220 (465)
T ss_pred hhhhhhhccCCCCchHHHHHhhhhhcCC---ChHHheEEec-c---c-----ccccchhHHHHHHHHHhc-CCeEEEEEe
Confidence 3567777777775544433222110000 0001111111 1 1 1111 135666667654 458999999
Q ss_pred cccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeee--ccccccC-cccccccc
Q 011669 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM--AKGIGNG-IPLGAVVT 337 (480)
Q Consensus 261 epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~--sK~~g~G-~pig~v~~ 337 (480)
..+|--+|.... +.+|-..-+..|+++=.|=++. +|... .+.++...|+.|. =|-+.+| =.||.+.+
T Consensus 221 SGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNVp-----L~LHdWgVDFACWCSYKYlnaGaGgIgGlFv 290 (465)
T KOG3846|consen 221 SGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNVP-----LQLHDWGVDFACWCSYKYLNAGAGGIGGLFV 290 (465)
T ss_pred ecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCCc-----eEEeecCCceEEEeeecccccCCCccceeee
Confidence 999988887765 6666655556788888998876 54332 2223334566653 3777644 24565555
Q ss_pred CHHHHHhhcCC------------------------CccccCCCcHH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 011669 338 TPEIAEVLTRR------------------------NYFNTFGGNPV-CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLT 392 (480)
Q Consensus 338 ~~~~~~~l~~~------------------------~~~~t~~~~~~-~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L~ 392 (480)
.++......++ ..+.-.+.+|+ ..++..+.|++...-+ .++++...-++-.-|+
T Consensus 291 Hekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYle 369 (465)
T KOG3846|consen 291 HEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLE 369 (465)
T ss_pred ehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHH
Confidence 44432211111 01111222333 3444556677665433 3334443333333333
Q ss_pred HhHHhc-----Cc-----------eeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEe
Q 011669 393 ALKDKY-----GI-----------IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRIT 456 (480)
Q Consensus 393 ~l~~~~-----~~-----------~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~ 456 (480)
.+.+.. +. +..+..+|.-+.+.|..+ ...+.+.|.++|++.-.. ..|.||+.
T Consensus 370 yL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp----------~~~vfqeL~krGv~~DkR--~PNvIRvA 437 (465)
T KOG3846|consen 370 YLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP----------TPKVFQELHKRGVIGDKR--RPNVIRVA 437 (465)
T ss_pred HHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC----------chHHHHHHHHcCeecccc--CCCceEee
Confidence 332211 10 012344566566655432 356889999999998653 36889998
Q ss_pred C-CCCCCHHHHHHHHHHHHHHHhh
Q 011669 457 P-PLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 457 p-~~~~t~~~id~~l~~l~~~l~~ 479 (480)
| |+..+-.|+-.++.+|.+++..
T Consensus 438 PvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 438 PVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred cchhhccHHHHHHHHHHHHHHHHH
Confidence 7 4778999999999999998754
No 380
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.20 E-value=0.00036 Score=72.27 Aligned_cols=173 Identities=14% Similarity=0.144 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccC-CCccccccCCCe
Q 011669 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ-SNWKFNVVQTGV 219 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~-~~~~~~~~~~g~ 219 (480)
..+.+..|..++.++.+ ...|.+||-|.||...+..+.. .+++|++-+++ |-+....+-+++. +.|-.+.
T Consensus 70 G~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~~--~GD~VLvdRN~-HKSi~~glilaGa~Pvyl~p~----- 140 (557)
T COG1982 70 GPIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVLT--PGDKVLVDRNC-HKSIHHGLILAGATPVYLEPS----- 140 (557)
T ss_pred ccHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhcC--CCCEEEecCCc-cHHHHHHHHHcCCceEEecCC-----
Confidence 34455555556666543 4567788888888887775443 66777776666 4444444555543 3222211
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccC
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG 299 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tg 299 (480)
.++. |+--.....+.+++.+.++...+..+|+.+|.. .|..-. +++|.+.+.++++++.+||.+--
T Consensus 141 -----~np~---~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~ 206 (557)
T COG1982 141 -----RNPL---YGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPA 206 (557)
T ss_pred -----CCcc---ccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcc
Confidence 1110 111000114566655544322225677777643 355554 89999999999999999998742
Q ss_pred -ccccCCCcccccccCCCcceeeec--cccccCccccccccC
Q 011669 300 -FARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLGAVVTT 338 (480)
Q Consensus 300 -fgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig~v~~~ 338 (480)
++..+ ...-.......|++|-| |.+++.--.+.+-.+
T Consensus 207 ~~~~~~--~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~ 246 (557)
T COG1982 207 HFDFSP--MLPESALNGGADFVTQSTHKLLAALSQASMIHVK 246 (557)
T ss_pred cccccc--cCcchhhhcCceEEEechhhhhhhhhhhHHHhhC
Confidence 12222 11111222345777777 555443233344444
No 381
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.15 E-value=0.0001 Score=71.57 Aligned_cols=207 Identities=16% Similarity=0.191 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHH-HHhc--ccccc-ccCChHHHHHHHHHHHhCCCCCCEEEE---eCCHHHHHHHHHHHHHhhcCCceEE
Q 011669 116 CHPYVVDSIVNQ-IKRI--QHSTV-LYLNHAIADFAEALASKMPGNLKVVFF---TNSGTEANELAIMMARLYTGCNDII 188 (480)
Q Consensus 116 ~~p~v~~A~~~~-~~~~--~~~~~-~~~~~~~~~l~e~L~~~~~~~~~~v~f---~~sGseA~~~Alk~ar~~~~~~~ii 188 (480)
|..+|++|+++. +... ..++. .|....+..|.+-.++.++. +..++ ..|||.|+..+|..... ++++++
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga--E~ALVRpq~vSGTHAi~~~Lfg~Lr--pGD~ll 100 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA--EDALVRPQFVSGTHAIALALFGVLR--PGDELL 100 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT---SEEEEETTS-SHHHHHHHHHHHH----TT-EEE
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc--hhhhhcccccchHHHHHHHHHhcCC--CCCeEE
Confidence 445777777652 2211 11222 23456778888889999964 44444 35999999999986554 788888
Q ss_pred EEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCc
Q 011669 189 SLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGG 268 (480)
Q Consensus 189 ~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G 268 (480)
+..|.=.-....++.+.++. .-.+...|+..-.++.. +|+....+.+++.++ .++++|.+-- +.|
T Consensus 101 ~~tG~PYDTL~~VIG~~g~~--~GSL~e~Gi~Y~~v~L~------~dg~~D~~~i~~~~~----~~tk~v~IQR---SrG 165 (403)
T PF06838_consen 101 SITGKPYDTLEEVIGIRGNG--PGSLKEFGIKYREVPLT------EDGTIDWEAIKKALK----PNTKMVLIQR---SRG 165 (403)
T ss_dssp ESSSS--CCHHHHHTSSSSS--SSSTGGGT-EEEE--B-------TTSSB-HHHHHHHHH----TTEEEEEEE----S-T
T ss_pred EcCCCchhhHHHHhCCCCCC--CCChHHhCceeEEEeec------CCCCcCHHHHHHhhc----cCceEEEEec---CCC
Confidence 77655433333444444431 11112235544333322 222222678888886 3778887643 334
Q ss_pred cee---CCCChHHHHHHHHHH--hCCEEEEcccccCccccCCCcccccccCCCccee--eeccccccCc-cc-cccccCH
Q 011669 269 IIE---LAPGYLPAVYKSIKK--AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGI-PL-GAVVTTP 339 (480)
Q Consensus 269 ~~~---~~~~~l~~l~~l~~~--~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~-pi-g~v~~~~ 339 (480)
.-. .+-+.++++.+++|+ -++++.+|..|..|--+- +-..+-.|++ ++=|..|||+ |. |||++++
T Consensus 166 Ys~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~------EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~ 239 (403)
T PF06838_consen 166 YSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ------EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK 239 (403)
T ss_dssp TSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc------CccccchhheeccceeCCCCCccCcCCEEechH
Confidence 332 222345555555555 389999999998874332 3334567877 5669999995 54 5899999
Q ss_pred HHHHhhcC
Q 011669 340 EIAEVLTR 347 (480)
Q Consensus 340 ~~~~~l~~ 347 (480)
++++....
T Consensus 240 ~lVe~~a~ 247 (403)
T PF06838_consen 240 DLVERAAY 247 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99887643
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.13 E-value=0.001 Score=65.93 Aligned_cols=227 Identities=13% Similarity=0.121 Sum_probs=116.3
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccccc---ccCCC
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE---AHGVV 316 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~---~~~~~ 316 (480)
.+.+|+.++..+++.+.+|+ .......|.. ++-+++|.++|++|||..|+.-+|+ .- ......-.+ ..|..
T Consensus 141 ~~~ie~~i~~~G~~~iLcvl-tttscfapr~---~D~i~~IakiC~~~~IPhlvNnAYg-vQ-~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVL-TTTSCFAPRL---PDDIEEIAKICKEYDIPHLVNNAYG-VQ-SSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEE-EESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT--HHHHHHHHHHHHHSTC
T ss_pred HHHHHHHHHHhCCCCeEEEE-EecCccCCCC---CccHHHHHHHHHHcCCceEEccchh-hh-HHHHHHHHHHHHhcCCc
Confidence 46777777765444455554 4444444433 2359999999999999999999985 40 000000000 12332
Q ss_pred c-ceeeeccccccCcccccccc-CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHH
Q 011669 317 P-DIVTMAKGIGNGIPLGAVVT-TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK---DKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 317 p-Divt~sK~~g~G~pig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~---~~~~~~~~~~~~~l~~~L 391 (480)
| ++-+..|-|=-|..-+-+.+ .+..+..+...-.+-.+..+.+-. ...|..+-. ..+.....+...+++++|
T Consensus 215 da~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~---~itLl~LG~~g~~~ll~~r~~~f~~l~erl 291 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDL---FITLLSLGCTGYGALLKERKASFPYLKERL 291 (389)
T ss_dssp SEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHH---HHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 2 22245565531111112222 344555554321111222222222 222222222 345666777888999999
Q ss_pred HHhHHhcCc-eeeEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCcee----eccCc---------CCCEEEEeC
Q 011669 392 TALKDKYGI-IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLV----GKGGF---------YGNVFRITP 457 (480)
Q Consensus 392 ~~l~~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v----~~~~~---------~~~~iRi~p 457 (480)
+++.++++. +.+.+..-..+.+++..-.... . ...-.+...|..+||.= .+.+. ...++-++-
T Consensus 292 ~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~--~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As 368 (389)
T PF05889_consen 292 KKWAEEVGERLLETPRNHISMAFTLDTLYEIS--Q-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS 368 (389)
T ss_dssp HHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCC--S-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE
T ss_pred HHHHHHhhhhhcCCCCCCeeEEEECccchhhc--c-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH
Confidence 999988852 3344333444556653221111 1 23456788888887652 22111 115677766
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 011669 458 PLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 458 ~~~~t~~~id~~l~~l~~~l~ 478 (480)
.+.+++||||.++++|+++++
T Consensus 369 aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 369 AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -TT--HHHHHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHhC
Confidence 788999999999999999875
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.98 E-value=0.0059 Score=59.57 Aligned_cols=194 Identities=18% Similarity=0.146 Sum_probs=116.8
Q ss_pred eEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC-Ccceeeec--ccccc-Cc
Q 011669 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPDIVTMA--KGIGN-GI 330 (480)
Q Consensus 255 ~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pDivt~s--K~~g~-G~ 330 (480)
.+-|..-++....|+-.+...+. .. +.++|+|-.-.-|+|. .++ .-|++.+| |.+|+ |
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr~---------iDvsk~dviyagaQKnlGpaG- 206 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSRP---------IDVSKYDVIYAGAQKNLGPAG- 206 (365)
T ss_pred ccEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcCC---------CChhHcceEEEehhhccCccc-
Confidence 33355545555556655432221 11 2788999654433331 122 34678776 99994 7
Q ss_pred cccccccCHHHHHhhcCC------------CccccCCCcHH-HHHHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHH
Q 011669 331 PLGAVVTTPEIAEVLTRR------------NYFNTFGGNPV-CTAAGHAVLKVIQKDK----LQNNAHVVGSYLKERLTA 393 (480)
Q Consensus 331 pig~v~~~~~~~~~l~~~------------~~~~t~~~~~~-~~aaa~a~L~~i~~~~----~~~~~~~~~~~l~~~L~~ 393 (480)
++.++.++++.+++... ...++|+.+|. +......+++.+++.+ +.++-++..+.|.+.+.+
T Consensus 207 -ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~ 285 (365)
T COG1932 207 -LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK 285 (365)
T ss_pred -eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 78899999998877553 13467776654 4555667788887643 444444445555554443
Q ss_pred hHHhcCcee---eEeccceeE-EEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHH
Q 011669 394 LKDKYGIIG---DVRGRGFLL-GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYL 469 (480)
Q Consensus 394 l~~~~~~~~---~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~ 469 (480)
.+... ....+..|. .|.+. +......+...+.++|+..-.|-.-.+-+|++.--++..++++.+
T Consensus 286 ----s~fy~~~v~~~~RS~mnV~f~~~--------~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL 353 (365)
T COG1932 286 ----SDFYRNLVAKANRSRMNVTFTLV--------DAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEAL 353 (365)
T ss_pred ----CCccccccchhhccceeEEEEcC--------cHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHH
Confidence 33221 113333443 34442 233456788888899988766632223389998888999999999
Q ss_pred HHHHHHHHhh
Q 011669 470 VDVMDYSLSK 479 (480)
Q Consensus 470 l~~l~~~l~~ 479 (480)
++-++.+.++
T Consensus 354 ~~fm~~f~~~ 363 (365)
T COG1932 354 TDFMDWFEET 363 (365)
T ss_pred HHHHHHHHHh
Confidence 9999887653
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.96 E-value=0.0016 Score=67.36 Aligned_cols=301 Identities=19% Similarity=0.289 Sum_probs=172.6
Q ss_pred hHHHHHHHHHHHhCCCCCCEE-EEeCCHHHHHHHHHHHHHhhc-----CCceEEEEcCCcccccccccccccCCCccccc
Q 011669 141 HAIADFAEALASKMPGNLKVV-FFTNSGTEANELAIMMARLYT-----GCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214 (480)
Q Consensus 141 ~~~~~l~e~L~~~~~~~~~~v-~f~~sGseA~~~Alk~ar~~~-----~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 214 (480)
....+|.+.|++..+ .+.+ +--|||...-.+.++..|.|. +...|...--+-||...+.....
T Consensus 582 ~lf~~Le~~Lc~iTG--~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma--------- 650 (1001)
T KOG2040|consen 582 QLFTELEKDLCEITG--FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA--------- 650 (1001)
T ss_pred HHHHHHHHHhheeec--ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhc---------
Confidence 344678888888874 4444 446899999888898888873 22345445567788666554443
Q ss_pred cCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 215 VQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 215 ~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
|...+++...-.+.. | ..+|+...+++ .++.+++++.-. +.-|+..+ -++++.++.++||.-+..|
T Consensus 651 ---gmkvvpV~~~~~G~i--d----~~dLk~kaekh-~~~Laa~MvTYP-ST~GvfE~---~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 651 ---GMKVVPVGCDANGNI--D----MVDLKAKAEKH-KDNLAALMVTYP-STHGVFEE---GIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred ---CCEEEEeeccCCCCc--c----HHHHHHHHHHh-hhhhheeEEecc-cccccccc---cHHHHHHHHHhcCCEEEec
Confidence 333343322211111 2 56777666654 457777777533 33455432 3899999999999999999
Q ss_pred c----cccCccccCCCccccc--ccCCCcceeeecccccc-CccccccccCHHHHHhhcCCC-----------ccccCC-
Q 011669 295 E----VQAGFARTGSHFWGFE--AHGVVPDIVTMAKGIGN-GIPLGAVVTTPEIAEVLTRRN-----------YFNTFG- 355 (480)
Q Consensus 295 E----v~tgfgr~G~~~~~~~--~~~~~pDivt~sK~~g~-G~pig~v~~~~~~~~~l~~~~-----------~~~t~~- 355 (480)
- +|-|+-|.| .+ +.+ +.++. -||.=.-|| |-.+|-+.+++.++..+.... ..++.+
T Consensus 717 GANMNAqVGlc~pG-d~-GaDV~HLNLH---KTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsa 791 (1001)
T KOG2040|consen 717 GANMNAQVGLCRPG-DI-GADVCHLNLH---KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSA 791 (1001)
T ss_pred CCCccceecccCCc-cc-cccceeeccc---ceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceec
Confidence 6 477777766 22 211 11111 033333343 567788888888776554311 112222
Q ss_pred ---CcHHHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecC-CCcCCCCHHH
Q 011669 356 ---GNPVCTAAGHAVLKVIQKDKLQNN---AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD-RQLKTPAKAE 428 (480)
Q Consensus 356 ---~~~~~~aaa~a~L~~i~~~~~~~~---~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~-~~~~~~~~~~ 428 (480)
|+..-....++-++.+-...+.+. ..-+..|+.++|+. .|.++. ....| .++-+|.-+ +.-+.....+
T Consensus 792 aP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil~-~~~~~-~vaHEFIlD~r~fK~~agie 866 (1001)
T KOG2040|consen 792 APWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES---HYKILF-RGENG-LVAHEFILDLRPFKKTAGIE 866 (1001)
T ss_pred cCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh---ccceeE-ecCCc-ceeeeeeeechhhccccCCc
Confidence 223333445566666654443322 22235566666655 344331 11222 344444322 2222223345
Q ss_pred HHHHHHHHHHcCceeeccC-cCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 011669 429 TLYIMDKMKEMGVLVGKGG-FYGNVFRITPPLCFTKEDADYLVDVMDYS 476 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~-~~~~~iRi~p~~~~t~~~id~~l~~l~~~ 476 (480)
+..+++.|.+.|....+-. +-.+++-|-|.-.-+++|+|++++++-.+
T Consensus 867 avDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040|consen 867 AVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred HHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHH
Confidence 6779999999998754321 12367888888778899999999988544
No 385
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.95 E-value=0.00048 Score=66.12 Aligned_cols=226 Identities=21% Similarity=0.207 Sum_probs=120.4
Q ss_pred CeEEEeeeccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcccccccc-CChHHHHHHHHHHHhCCCC---
Q 011669 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY-LNHAIADFAEALASKMPGN--- 157 (480)
Q Consensus 82 p~~~~~g~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~l~e~L~~~~~~~--- 157 (480)
|.-+.=|-|.| .|.+|+.|+= |.|.+|=++.+.+. . .-.| +-....++.+.-+++.-++
T Consensus 52 ~~KiNLgvGaY-Rdd~gKp~vL--------------~~VrkAE~ql~~~~-l-dKEYlpI~Gl~eF~k~sakLa~G~~s~ 114 (427)
T KOG1411|consen 52 PKKINLGVGAY-RDDNGKPYVL--------------PSVRKAEQQLASLS-L-DKEYLPITGLAEFNKLSAKLALGDNSP 114 (427)
T ss_pred cceeeecccce-ecCCCCeeee--------------HHHHHHHHHHhhhc-c-cchhccccchHHHHHHHHHHhhcCCch
Confidence 55566788887 5888887752 67777655433321 0 1112 2334455655555543211
Q ss_pred ---CCEEEE--eCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCCcCCCC
Q 011669 158 ---LKVVFF--TNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF 232 (480)
Q Consensus 158 ---~~~v~f--~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 232 (480)
.+++.+ +-|||-|+..+-.....+-+..+|.+.+|.+ |.........+.+ +....+-++. ..
T Consensus 115 ~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTW-gNh~~if~~ag~~----------~~~yrYyd~~--t~ 181 (427)
T KOG1411|consen 115 VIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTW-GNHKNIFKDAGLP----------VKFYRYYDPK--TR 181 (427)
T ss_pred hhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcc-cccCccccccCcc----------eeeeeecccc--cc
Confidence 123433 4588888887776544444566788888887 3222222222211 1111110110 01
Q ss_pred CCChHHHHHHHHHHHHccCCCceEEEEEc-ccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCccc--
Q 011669 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSE-SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-- 309 (480)
Q Consensus 233 ~~d~~~~~~~le~~i~~~~~~~~a~vi~e-pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~-- 309 (480)
+-|-...++++.++ ++.- .|++- ..++++|+ .|.++-+++|.++.++.+.+-++|-+|.||. .| .+..
T Consensus 182 gld~~g~ledl~~~-----p~gs-~ilLhaCaHNPTGv-DPt~eqw~ki~~~~~~k~~~pffDmAYQGfa-SG-~~d~DA 252 (427)
T KOG1411|consen 182 GLDFKGMLEDLGEA-----PEGS-IILLHACAHNPTGV-DPTKEQWEKISDLIKEKNLLPFFDMAYQGFA-SG-DLDKDA 252 (427)
T ss_pred ccchHHHHHHHhcC-----CCCc-EEEeehhhcCCCCC-CccHHHHHHHHHHhhhccccchhhhhhcccc-cC-CchhhH
Confidence 11222222333221 2222 33333 36677775 5788899999999999999999999999994 45 2211
Q ss_pred --c---cccCCCcce-eeeccccc-cCcccccc---ccCHHHHHhhc
Q 011669 310 --F---EAHGVVPDI-VTMAKGIG-NGIPLGAV---VTTPEIAEVLT 346 (480)
Q Consensus 310 --~---~~~~~~pDi-vt~sK~~g-~G~pig~v---~~~~~~~~~l~ 346 (480)
. ...|...-+ -+++|.+| -|=|+|++ +-+++.+..+.
T Consensus 253 ~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~ 299 (427)
T KOG1411|consen 253 QAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVE 299 (427)
T ss_pred HHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHH
Confidence 1 111221111 16889998 46677754 34455554443
No 386
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00053 Score=64.93 Aligned_cols=194 Identities=17% Similarity=0.236 Sum_probs=106.6
Q ss_pred ccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCC---Ccccccc---cCCCccee--eeccccc-cCccc
Q 011669 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS---HFWGFEA---HGVVPDIV--TMAKGIG-NGIPL 332 (480)
Q Consensus 262 pi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~---~~~~~~~---~~~~pDiv--t~sK~~g-~G~pi 332 (480)
..++++|+- |+.+-+++|.+..++.+.+-.+|-+|.||. +|. .-|+... .| .+-++ +|+|.+| -|-|+
T Consensus 186 CAhNPTGmD-PT~EQW~qia~vik~k~lf~fFDiAYQGfA-SGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRv 262 (410)
T KOG1412|consen 186 CAHNPTGMD-PTREQWKQIADVIKSKNLFPFFDIAYQGFA-SGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERV 262 (410)
T ss_pred cccCCCCCC-CCHHHHHHHHHHHHhcCceeeeehhhcccc-cCCccccHHHHHHHHhcC-CeEEEEhhhhhhcccccccc
Confidence 357888864 688889999999999999999999999994 441 2343322 23 22233 6899998 46677
Q ss_pred cc---cccCHHHHHhhcCCC---ccccCCC-cHHHHHHHHHHHHHhh-hhHHHH-------HHHHHHHHHHHHHHHhHHh
Q 011669 333 GA---VVTTPEIAEVLTRRN---YFNTFGG-NPVCTAAGHAVLKVIQ-KDKLQN-------NAHVVGSYLKERLTALKDK 397 (480)
Q Consensus 333 g~---v~~~~~~~~~l~~~~---~~~t~~~-~~~~~aaa~a~L~~i~-~~~~~~-------~~~~~~~~l~~~L~~l~~~ 397 (480)
|- |+-.+..+..+.... .-.+++. +..+......+|+.-+ .++|.+ ++.+++..|++.|..| +
T Consensus 263 Gnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL--~ 340 (410)
T KOG1412|consen 263 GNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVAL--K 340 (410)
T ss_pred cceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--C
Confidence 73 333455544433211 1234433 2334444445553211 133443 4444555555555554 2
Q ss_pred cCcee-e-EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 011669 398 YGIIG-D-VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475 (480)
Q Consensus 398 ~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~ 475 (480)
-|.-+ . ++..|+|-.--+. ...+-....++.|++.+.| ||+.+ ..+...+|....+|++
T Consensus 341 TPGtWDHI~~QiGMFSyTGLt------------p~qV~~li~~h~vyLl~~G------RInis-GLN~~NveyVAkAIde 401 (410)
T KOG1412|consen 341 TPGTWDHITQQIGMFSYTGLT------------PAQVDHLIENHKVYLLSDG------RINIS-GLNMKNVEYVAKAIDE 401 (410)
T ss_pred CCCcHHHHHhhccceeecCCC------------HHHHHHHHHhceEEEecCC------cEeee-ccccccHHHHHHHHHH
Confidence 22211 1 3444544322110 1223333345678887654 44433 4456678888888888
Q ss_pred HHhh
Q 011669 476 SLSK 479 (480)
Q Consensus 476 ~l~~ 479 (480)
+++.
T Consensus 402 ~Vr~ 405 (410)
T KOG1412|consen 402 TVRA 405 (410)
T ss_pred HHHh
Confidence 7654
No 387
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.0059 Score=61.17 Aligned_cols=320 Identities=17% Similarity=0.157 Sum_probs=159.5
Q ss_pred CHHHHHHHHHHHHhc--cccccccC--ChHHHHHHHHHHHhCCCCCC-EEEEeCCHHHHHHHHHHHHHhhcC------Cc
Q 011669 117 HPYVVDSIVNQIKRI--QHSTVLYL--NHAIADFAEALASKMPGNLK-VVFFTNSGTEANELAIMMARLYTG------CN 185 (480)
Q Consensus 117 ~p~v~~A~~~~~~~~--~~~~~~~~--~~~~~~l~e~L~~~~~~~~~-~v~f~~sGseA~~~Alk~ar~~~~------~~ 185 (480)
+|+..+-+.+.+.++ .| ...|+ .....+....++.+++++.+ -=.-|.+||||..++.|..+.... +.
T Consensus 93 ~~~~~~l~~~~~~k~N~l~-~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p 171 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKFNPLH-PDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKP 171 (491)
T ss_pred CcchhhHHHHHHhhcCccC-ccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCc
Confidence 455555555555543 11 11222 23445666667777765533 124567999998888876544321 12
Q ss_pred eEEEEcCCcccccccccccccCCCccccccCCCee--EecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEccc
Q 011669 186 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH--HALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESI 263 (480)
Q Consensus 186 ~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~--~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi 263 (480)
.|++.....-++-.. ... .++. .+++.. +.|.-| ...+.+.++ +++.+++.+-.
T Consensus 172 ~iv~~~~v~~a~eK~--------a~y-----f~v~l~~V~~~~---~~~~~D----~~k~~~~i~----eNti~lv~~~~ 227 (491)
T KOG1383|consen 172 NIVTPQNVHAAFEKA--------ARY-----FEVELREVPLDE---GDYRVD----PGKVVRMID----ENTIMLVGSLP 227 (491)
T ss_pred cccchHHHHHHHHHH--------Hhh-----EEEEEEeeeccc---cceEec----HHHHHHHhc----cceEEEEEEcC
Confidence 333322111000000 001 1222 222210 111122 455556664 47888888887
Q ss_pred CCCCcceeCCCChHHHHHHHHHH-hCCEEEEcccccCcccc-C---CCcccccccCCCcceeeeccccc-cCcccccccc
Q 011669 264 QGVGGIIELAPGYLPAVYKSIKK-AGGLCIADEVQAGFART-G---SHFWGFEAHGVVPDIVTMAKGIG-NGIPLGAVVT 337 (480)
Q Consensus 264 ~~~~G~~~~~~~~l~~l~~l~~~-~gillI~DEv~tgfgr~-G---~~~~~~~~~~~~pDivt~sK~~g-~G~pig~v~~ 337 (480)
+-+.|.+.+ +++|.++..| +++.+.+|..-.||--. + ...|.|...++ +.+.+-+--+| .--.++|++-
T Consensus 228 ~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V-~Sisa~~HKYGl~~~G~~~vl~ 302 (491)
T KOG1383|consen 228 NFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGV-TSISADGHKYGLAPAGSSWVLY 302 (491)
T ss_pred CCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCc-eeEeeccceeeeeecCcEEEEE
Confidence 777787766 9999999999 99999999999888432 2 11233332222 22333331122 1113467775
Q ss_pred CH-HHH-HhhcC-----CCcc--ccCCCc--HHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHhHHhcCceee
Q 011669 338 TP-EIA-EVLTR-----RNYF--NTFGGN--PVCTAAGHAVLKVIQKDKLQ---NNAHVVGSYLKERLTALKDKYGIIGD 403 (480)
Q Consensus 338 ~~-~~~-~~l~~-----~~~~--~t~~~~--~~~~aaa~a~L~~i~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~~ 403 (480)
+. ++. ..+.- +... .|.+++ ..-.++.++++=.+-.+++. +++.+....+++++++.. .+.
T Consensus 303 r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~-~i~---- 377 (491)
T KOG1383|consen 303 RNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIK-GIK---- 377 (491)
T ss_pred cccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccc-cce----
Confidence 43 322 11110 1111 233332 23344455555444455444 455556667777777742 111
Q ss_pred EeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHH-HHHHHHHHHHHHhh
Q 011669 404 VRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKED-ADYLVDVMDYSLSK 479 (480)
Q Consensus 404 v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~-id~~l~~l~~~l~~ 479 (480)
+-|...+..+-+.+.. ...-++.+.|.+.|..+-.- .+...+.|+.-..+..++ .|+++.-|++++.+
T Consensus 378 i~gkp~vs~~~~~s~~-------~~i~elsd~l~~~GW~lnal-q~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 378 IVGKPLVSFILFGSND-------VNIFELSDLLRKKGWILNAL-QFPAAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred ecCCCcEEEEEccCCc-------cchhhhhHHHHhcCcCcccc-CCCCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 2222333222222111 22456788899999887432 122233344334444444 57788888877764
No 388
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.62 E-value=0.027 Score=62.38 Aligned_cols=272 Identities=15% Similarity=0.144 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcC--CceEEEEcCCcccccccccccccCCCccccccCCCe
Q 011669 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG--CNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGV 219 (480)
Q Consensus 142 ~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~--~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~ 219 (480)
.+-++-..++++++-+..+.-.-..+|.+-| |+.+++.+++ +.++++ +.+-|-.+..++.... ...|+
T Consensus 125 al~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~~~~k~~~~~v-~~~~hP~~~~v~~t~~--------~~~g~ 194 (954)
T PRK12566 125 ALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRVAKSKSNRFFV-DEHCHPQTLSVLRTRA--------EGFGF 194 (954)
T ss_pred HHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHHhhcCCCEEEE-CCCCCHHHHHHHHHhh--------hcCCc
Confidence 3456777788887544333334446666666 4444444443 445554 4455544444332221 11244
Q ss_pred eEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc--ccc
Q 011669 220 HHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD--EVQ 297 (480)
Q Consensus 220 ~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D--Ev~ 297 (480)
..+. +++++.++ +++++|++...+ .-|.+.. +++|.++++++|+++|+- =.-
T Consensus 195 ~i~~-----------------~~~~~~~~----~~~~~v~vq~P~-~~G~i~d----~~~i~~~~h~~gal~~~~~d~la 248 (954)
T PRK12566 195 ELVV-----------------DAVDNLAA----HAVFGALLQYPD-THGEIRD----LRPLIDQLHGQQALACVAADLLS 248 (954)
T ss_pred EEEE-----------------cchhhcCC----CCEEEEEEECCC-CceEEcc----HHHHHHHHHHcCCEEEEEeCHHH
Confidence 4442 23444332 368888885443 3455543 899999999999998832 111
Q ss_pred -cCccccCCCcccccccCCCcceee-----eccccc-cCccccccccCHHHHHhhcCCCcc-------------------
Q 011669 298 -AGFARTGSHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRRNYF------------------- 351 (480)
Q Consensus 298 -tgfgr~G~~~~~~~~~~~~pDivt-----~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~------------------- 351 (480)
+.+-..| +...||++ |+=.++ ||--.|++.+++++...+-.+..+
T Consensus 249 L~ll~~Pg---------e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtRE 319 (954)
T PRK12566 249 LLVLTPPG---------ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTRE 319 (954)
T ss_pred HhCCCChh---------hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHH
Confidence 1111111 12356653 334444 455678888888887776543211
Q ss_pred ---------ccCCCcHHHHHHHHHHHHHh-hhhHH---HHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecC
Q 011669 352 ---------NTFGGNPVCTAAGHAVLKVI-QKDKL---QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD 418 (480)
Q Consensus 352 ---------~t~~~~~~~~aaa~a~L~~i-~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~ 418 (480)
+..+.|..-+|.+.+..-.. -.+.+ .+++.....++.++|.+. .+.... ...|--+.+.-.
T Consensus 320 QHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~--g~~~~~----~~fF~~~~v~~~ 393 (954)
T PRK12566 320 QHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK--GIKRLN----RHFFDTLTLEVG 393 (954)
T ss_pred HHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc--CCcccc----CCccceEEEEcc
Confidence 22233332222222222122 22333 345555666777777663 222211 122322222111
Q ss_pred CCcCCCCHHHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 419 RQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 419 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
. ...++.+...++|+.++... .+.+.|+.-=++|.+|++.++++|.
T Consensus 394 ~--------~~~~~~~~a~~~~~n~r~~~--~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 394 G--------AQAAIIESAEAARINLRILG--RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred C--------CHHHHHHHHHHCCCeeEEeC--CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 0 14567888889999998654 4678899888899999999999883
No 389
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.44 E-value=0.019 Score=57.61 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=111.4
Q ss_pred HHHHHHHHc-cCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCC-Ccc
Q 011669 241 KDVQDLIDF-GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV-VPD 318 (480)
Q Consensus 241 ~~le~~i~~-~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~-~pD 318 (480)
+.|+++|++ ...+-+-.+++- ..|++|.. .-+.|.+|..+|+++|++|++|.+|.|-...-+.+ -.-.-|+ ..|
T Consensus 220 ~~L~~AIe~D~arGlIPf~v~a-t~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~-r~l~rGie~aD 295 (511)
T KOG0628|consen 220 DTLRKAIEEDIARGLIPFFVCA-TLGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGSAFICPEF-RYLMRGIEYAD 295 (511)
T ss_pred HHHHHHHHHHHhCCCccEEEEE-eecCcccc--ccccHHHhcchhhhcCEEEEeehhhccccccCHHH-HHHhhcchhhc
Confidence 445555543 113345455554 44666554 45669999999999999999999998632211000 0000122 123
Q ss_pred eee--eccccc-----------cCcccc-ccccCHHHHHhhcCCC-ccccCCC----cHHHHHHHHHHHHHhhhhHHHHH
Q 011669 319 IVT--MAKGIG-----------NGIPLG-AVVTTPEIAEVLTRRN-YFNTFGG----NPVCTAAGHAVLKVIQKDKLQNN 379 (480)
Q Consensus 319 ivt--~sK~~g-----------~G~pig-~v~~~~~~~~~l~~~~-~~~t~~~----~~~~~aaa~a~L~~i~~~~~~~~ 379 (480)
... .+|.+- .|..+. +.-+.+...+.-.+.. .-.-+.. ..+-..-.+-+++.+--++++++
T Consensus 296 Sfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~ 375 (511)
T KOG0628|consen 296 SFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNY 375 (511)
T ss_pred cccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHH
Confidence 221 234432 232222 1112222221111110 0011111 12222233445565556777777
Q ss_pred HHHHHHHHHHHHHHhHHhcCcee--eEeccceeEEEEEecCCCcCCCCHHHHHHHHHHHHHc-CceeeccCcCCC-EEEE
Q 011669 380 AHVVGSYLKERLTALKDKYGIIG--DVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM-GVLVGKGGFYGN-VFRI 455 (480)
Q Consensus 380 ~~~~~~~l~~~L~~l~~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~-~iRi 455 (480)
+++..+ |.+.+.++..+-+... ..+-.|+ +.+.+..+ ....+.+.+++-.. .|.+.+....+. .||+
T Consensus 376 iR~h~~-La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~-------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf 446 (511)
T KOG0628|consen 376 IREHVR-LAKEFETLVRADPRFEIVNKRILGL-VCFRLKGD-------NEINEALLNRLNSSGRIHLVPASLHGKFVLRF 446 (511)
T ss_pred HHHHHH-HHHHHHHHhhcCCcceeecccccce-eEEeecCC-------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEE
Confidence 776543 4455566543333221 2222333 22333221 23456677777655 477777654443 5788
Q ss_pred eCCCC-CCHHHHHHHHHHHHHHHhh
Q 011669 456 TPPLC-FTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 456 ~p~~~-~t~~~id~~l~~l~~~l~~ 479 (480)
+.... ++++||+++.+.|.+....
T Consensus 447 ~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 447 AVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EecCCCCcHHHHHHHHHHHHHHHHH
Confidence 75433 5778999999988876543
No 390
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.06 Score=52.52 Aligned_cols=323 Identities=17% Similarity=0.115 Sum_probs=149.6
Q ss_pred CCCHHHHHHHHHHHHh-cc--cccccc-C-ChHHHHHHHHHHH-----hCCCCCC---EEEEeCCHHHHHHHHHHHHHhh
Q 011669 115 HCHPYVVDSIVNQIKR-IQ--HSTVLY-L-NHAIADFAEALAS-----KMPGNLK---VVFFTNSGTEANELAIMMARLY 181 (480)
Q Consensus 115 h~~p~v~~A~~~~~~~-~~--~~~~~~-~-~~~~~~l~e~L~~-----~~~~~~~---~v~f~~sGseA~~~Alk~ar~~ 181 (480)
..+..|.+|+-..+.+ +. +...+| . ++. .+-.|.|++ .+..+.+ .-+-.-|||-||..+-.....
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~-ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~- 128 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEY-IDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLK- 128 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchH-HHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcC-
Confidence 3457888888776654 21 111222 2 333 333344443 2433322 223456999999887765544
Q ss_pred cCCceEEEEc---CCc--ccccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceE
Q 011669 182 TGCNDIISLR---NAY--HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256 (480)
Q Consensus 182 ~~~~~ii~~~---~~y--hG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a 256 (480)
+.++|.-++ |+. ||+.......++.+.|-.. .||+.... .+-...+.||+.-... +.+
T Consensus 129 -Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeS------------mPYkv~~~-TG~IDYD~Le~~A~~f---rPk 191 (477)
T KOG2467|consen 129 -PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFES------------MPYKVDPS-TGYIDYDKLEKTATLF---RPK 191 (477)
T ss_pred -CCCeeeeccCCCCCccccccccCCceeeeeeeeccc------------CceeeCCC-CCceehHHHHHHHHhc---CCc
Confidence 566666543 221 3333222222222221111 12221111 1111145666544432 456
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccc-cCccccCCCcccccccCCCcceeeec--cccccCcccc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ-AGFARTGSHFWGFEAHGVVPDIVTMA--KGIGNGIPLG 333 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-tgfgr~G~~~~~~~~~~~~pDivt~s--K~~g~G~pig 333 (480)
.+|+- +.--+..-...+++++|++.|++|.+|=+| +|+.-.|.-.-.|++ .||||.. |++-| -|-|
T Consensus 192 ~iiaG------~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG-PRg~ 260 (477)
T KOG2467|consen 192 LIIAG------TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG-PRGA 260 (477)
T ss_pred EEEec------cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC-Ccce
Confidence 66652 222222223689999999999999999876 454333311112333 5777544 77754 2333
Q ss_pred ccccCHHHH---------------HhhcC----CCccccCCCcHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHH
Q 011669 334 AVVTTPEIA---------------EVLTR----RNYFNTFGGNPVCTAAGHAVLKVIQKD---KLQNNAHVVGSYLKERL 391 (480)
Q Consensus 334 ~v~~~~~~~---------------~~l~~----~~~~~t~~~~~~~~aaa~a~L~~i~~~---~~~~~~~~~~~~l~~~L 391 (480)
.+..++.+. +.+.. ..+++..+-.-.+.|. +|+--... .+++++.++.+.|.+.|
T Consensus 261 mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAv---ALkQa~tpefk~Yq~qV~~Nakala~~l 337 (477)
T KOG2467|consen 261 MIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAV---ALKQAMTPEFKEYQKQVLKNAKALASAL 337 (477)
T ss_pred eEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHH---HHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344433221 11111 1122222221222222 33332333 34555666666666666
Q ss_pred HHhHHhcCceeeEecc-ceeEEEEEecCCCcCCCCHHHHHHHHHHH---HHcCceeecc-CcCCCEEEEeCCCCC----C
Q 011669 392 TALKDKYGIIGDVRGR-GFLLGVEFVTDRQLKTPAKAETLYIMDKM---KEMGVLVGKG-GFYGNVFRITPPLCF----T 462 (480)
Q Consensus 392 ~~l~~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l---~~~Gv~v~~~-~~~~~~iRi~p~~~~----t 462 (480)
.++ .+.++. .|. ..++.+++.... -+...++.+++.+ .++.-+.+-. ....+-|||.-|..+ .
T Consensus 338 ~~~--Gy~lvt--gGTDnHlvLvDLr~~G----~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~ 409 (477)
T KOG2467|consen 338 ISR--GYKLVT--GGTDNHLVLVDLRPKG----VDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFG 409 (477)
T ss_pred HHc--CceEec--CCccceEEEEeccccC----CchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCcc
Confidence 554 232221 111 123444543221 2334455555544 2333222211 112345899877655 4
Q ss_pred HHHHHHHHHHHHHHHh
Q 011669 463 KEDADYLVDVMDYSLS 478 (480)
Q Consensus 463 ~~~id~~l~~l~~~l~ 478 (480)
++|.++..+-|+++++
T Consensus 410 e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 410 EEDFEKVADFIDRAVK 425 (477)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6888888888777653
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.13 E-value=0.11 Score=49.50 Aligned_cols=187 Identities=15% Similarity=0.157 Sum_probs=106.9
Q ss_pred ChHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCC
Q 011669 140 NHAIADFAEALASKMPGNLK--VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT 217 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~--~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 217 (480)
.-.+..|.+-.++.++.... +.- .-|||.|+..||.-... +++..+...|.=.-.....+.+.+... -.+...
T Consensus 64 D~GRdtLe~vyA~vf~aE~a~VRpq-~isGTHAI~~aLfg~LR--pgDell~i~G~PYDTLeevIG~rg~~~--gSL~df 138 (416)
T COG4100 64 DLGRDTLERVYAQVFGAEAALVRPQ-IISGTHAIACALFGILR--PGDELLYITGSPYDTLEEVIGLRGEGQ--GSLKDF 138 (416)
T ss_pred ccchhHHHHHHHHHhccccceeeee-eecchhHHHHHHHhccC--CCCeEEEecCCcchhHHHHhccCCCCc--ccHHHh
Confidence 44567788888888864322 222 35899999999875443 677887766554333333333333210 001112
Q ss_pred CeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHh--CCEEEEcc
Q 011669 218 GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA--GGLCIADE 295 (480)
Q Consensus 218 g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~--gillI~DE 295 (480)
|+..-.+|... ++....+.++..++ ++++.|.+--.-|-+-.-..+-+.++++.++.++- ++++.+|.
T Consensus 139 gi~Y~~v~Lt~------~gkiD~~~v~~~i~----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDN 208 (416)
T COG4100 139 GIKYKAVPLTA------DGKIDIQAVKTAIS----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDN 208 (416)
T ss_pred Ccceeeccccc------CCcccHHHHHHhcC----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEec
Confidence 33222222211 22222556666664 47777766433332211111224566667777763 79999999
Q ss_pred cccCccccCCCcccccccCCCccee--eeccccccCc--cccccccCHHHHHhhcC
Q 011669 296 VQAGFARTGSHFWGFEAHGVVPDIV--TMAKGIGNGI--PLGAVVTTPEIAEVLTR 347 (480)
Q Consensus 296 v~tgfgr~G~~~~~~~~~~~~pDiv--t~sK~~g~G~--pig~v~~~~~~~~~l~~ 347 (480)
.|..|-.+- +...+..|++ ++=|..|||+ --||+.+++++++...-
T Consensus 209 CYGEFvE~~------EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~y 258 (416)
T COG4100 209 CYGEFVEEK------EPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAY 258 (416)
T ss_pred cchhhhhcc------CccccchhhhccceeeCCCCceeeccceeechHHHHHhhce
Confidence 998774332 3334566776 5679999885 45789999999887654
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.94 E-value=0.035 Score=48.46 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=44.5
Q ss_pred cCChHHHHHHHHHHHhCC----CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccc
Q 011669 138 YLNHAIADFAEALASKMP----GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196 (480)
Q Consensus 138 ~~~~~~~~l~e~L~~~~~----~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG 196 (480)
+..+....+++.+.+.++ .+.++|++|+++++|++.+++.... +++.|++.++.|.|
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y~~ 153 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--PGDAFLVPTPYYAA 153 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCCCC
Confidence 445666777777766644 3467899999999999999887654 78899999999975
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=91.23 E-value=24 Score=37.79 Aligned_cols=268 Identities=15% Similarity=0.184 Sum_probs=133.2
Q ss_pred HHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCCCC
Q 011669 148 EALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP 227 (480)
Q Consensus 148 e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~ 227 (480)
..++++.+-+..+.-+..-||.|-|+.....+ ..++++ ++.+...|-.+..++..... ..|+..+.
T Consensus 170 Tmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~-~~krkk-~vvd~~~hpqtlsV~~TRa~--------~~~i~v~~---- 235 (1001)
T KOG2040|consen 170 TMITDLTGLPMANASLLDEGTAAAEAMALCNR-INKRKK-FVVDSNCHPQTLSVVKTRAK--------GFGIKVVV---- 235 (1001)
T ss_pred HhhhhccCCcccchhhhccchhHHHHHHHHHh-hcccce-EEecCCCCcchhhhhhcccc--------ccceeEEe----
Confidence 34455555444555566678877775554444 445556 44566666666655543321 12333221
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc-c--ccCccccC
Q 011669 228 YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE-V--QAGFARTG 304 (480)
Q Consensus 228 ~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE-v--~tgfgr~G 304 (480)
.++++.-. ..++++++++--.... |.+.. ..++.+++++.|.++++-- - -|-+-..|
T Consensus 236 -------------~~~~~~~~--s~~~v~gvlvQYP~t~-G~i~d----~~el~~~a~~~~s~vv~atDLLaLtiLrpPg 295 (1001)
T KOG2040|consen 236 -------------SDIKEADY--SSKDVSGVLVQYPDTE-GSVLD----FDELVELAHANGSLVVMATDLLALTILRPPG 295 (1001)
T ss_pred -------------cCHHHhhc--cccceeEEEEEcCCCC-CcccC----HHHHHHHhhccCceEEEeehhhHHHccCChh
Confidence 11222211 1347888887654444 45554 7899999999998877421 1 11111111
Q ss_pred CCcccccccCCCcceee-----eccccc-cCccccccccCHHHHHhhcCCCccccC--CCc-------------------
Q 011669 305 SHFWGFEAHGVVPDIVT-----MAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTF--GGN------------------- 357 (480)
Q Consensus 305 ~~~~~~~~~~~~pDivt-----~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~--~~~------------------- 357 (480)
.+| .||++ |+-.+| ||--.|+..+++++...+..+..+.|- .++
T Consensus 296 -------efG--aDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKA 366 (1001)
T KOG2040|consen 296 -------EFG--ADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKA 366 (1001)
T ss_pred -------hcC--ceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhcc
Confidence 122 35543 444555 444455566666665544333222111 111
Q ss_pred --HHHHHHHH-HH----HHHhhh----hHHHHHHHHHHHHHHHHHHHhHHhcCceeeEeccceeEEEEEecCCCcCCCCH
Q 011669 358 --PVCTAAGH-AV----LKVIQK----DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAK 426 (480)
Q Consensus 358 --~~~~aaa~-a~----L~~i~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~ 426 (480)
.++.|-|+ |. ..+... +++..++......|..+|+... +.++ ....|-.+.+.- .
T Consensus 367 TSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag--hel~----~k~fFDTLkI~~--------~ 432 (1001)
T KOG2040|consen 367 TSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG--HELQ----HKPFFDTLKIRC--------G 432 (1001)
T ss_pred chhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc--hhhc----cccccceEEEEe--------c
Confidence 11111111 11 111111 2334445555556666665542 2111 111221222110 1
Q ss_pred HHHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 011669 427 AETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474 (480)
Q Consensus 427 ~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~ 474 (480)
...+++.....++++-++--. .+.+-++.--+++++|+|.++..+.
T Consensus 433 ~s~~~~l~rA~~~~iNlr~~e--d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 433 CSAEEVLDRAAKRQINLRLVE--DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred CcHHHHHHHHHhhcCceEEee--cCceEEeecccccHHHHHHHHHHHc
Confidence 125667777777777776432 4567777777889999999998875
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=85.58 E-value=5.4 Score=37.55 Aligned_cols=227 Identities=12% Similarity=0.086 Sum_probs=108.1
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCccccCCCcccc---cccCCC
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF---EAHGVV 316 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~---~~~~~~ 316 (480)
++.+++.+++.+++-+-+|.... .-.-+-+++-+++|..+|..|++.-|+..+|. +-... ...-+ ...| .
T Consensus 143 leav~~~iee~g~dcilci~stt----scfapr~pd~leaiaaica~~diphivnnayg-lqsee-~i~~iaa~~~~g-r 215 (432)
T KOG3843|consen 143 LEAVEAIIEELGEDCILCIHSTT----SCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG-LQSEE-CIHKIAAAAECG-R 215 (432)
T ss_pred HHHHHHHHHHhCCceEEEEeecc----cccCCCCCchHHHHHHHHHccCchhhhccccc-cchHH-HHHHHHHHhhhc-c
Confidence 56677788776554344443322 11234467889999999999999999999873 31110 00000 0112 2
Q ss_pred ccee--eeccccccCcccc-cccc--CHHHHHhhcCCCccccCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 011669 317 PDIV--TMAKGIGNGIPLG-AVVT--TPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERL 391 (480)
Q Consensus 317 pDiv--t~sK~~g~G~pig-~v~~--~~~~~~~l~~~~~~~t~~~~~~~~aaa~a~L~~i~~~~~~~~~~~~~~~l~~~L 391 (480)
.|.+ ++-|.|-- |+| ++++ ++..++.+.+.-.+-.-..+.+-....+-.+.--.-.++...-+++..+++..+
T Consensus 216 ida~vqsldknf~v--pvggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki 293 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMV--PVGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKI 293 (432)
T ss_pred HHHHHHHhhhccee--ecchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Confidence 2322 56677651 332 3332 345555554422221122222222222211110000123344455666677777
Q ss_pred HHhHHhcC-ceeeEeccceeEEEEEecCCCcCCCCHH-HHHHHHHHHHHcCce---eeccCc------------------
Q 011669 392 TALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTPAKA-ETLYIMDKMKEMGVL---VGKGGF------------------ 448 (480)
Q Consensus 392 ~~l~~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~-~~~~~~~~l~~~Gv~---v~~~~~------------------ 448 (480)
.++.+.++ .+..++..-.-..+.+. +..+... ....+...|..+||- +.|.+.
T Consensus 294 ~~~ae~~~e~l~~~p~n~is~amtl~----ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~ 369 (432)
T KOG3843|consen 294 IKFAEAIGECLLETPENEISLAMTLK----TIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTN 369 (432)
T ss_pred HHHHHHhhhhhhcCCCchhhhhhhhc----cCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccC
Confidence 77666553 22222211111111121 1112222 123355566666653 333211
Q ss_pred --CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 011669 449 --YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479 (480)
Q Consensus 449 --~~~~iRi~p~~~~t~~~id~~l~~l~~~l~~ 479 (480)
...++-+..+...++.|+|+++.+|++.++.
T Consensus 370 e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~ 402 (432)
T KOG3843|consen 370 EQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAA 402 (432)
T ss_pred cCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHH
Confidence 0123444445567889999999999987753
No 395
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=66.29 E-value=1.3e+02 Score=29.17 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=67.5
Q ss_pred HHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccccCCCccccccCCCeeEecCC
Q 011669 146 FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNP 225 (480)
Q Consensus 146 l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 225 (480)
.+.+-.+.+. -.+|++|-|.|-.++.-|+.|++...+..||+-++.= ....-.++ .+....|+.....|
T Consensus 152 Ia~Qa~ehih--snEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p-~~qgH~~A--------k~la~~giettVI~ 220 (353)
T KOG1465|consen 152 IAVQAIEHIH--SNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAP-NNQGHELA--------KPLAQAGIETTVIP 220 (353)
T ss_pred HHHHHHHHhc--cCceEEecCccHHHHHHHHHHHhccCceEEEEeecCC-cccchHhh--------HHHHHcCCeeEEec
Confidence 3344344443 2468999999999999999988754444555544322 11100000 01112355544333
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcc-cCCCCcceeCCCChHHHHHHHHHHhCCEEEEcccccCcccc
Q 011669 226 DPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART 303 (480)
Q Consensus 226 ~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~ep-i~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~tgfgr~ 303 (480)
+ ..+-..+.+ --+.||... +.++||...+.- ...++..+++|-+++|+ -.|+...
T Consensus 221 d--------------aaVfA~Msr----VnKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~V---lAp~yKL 276 (353)
T KOG1465|consen 221 D--------------AAVFAMMSR----VNKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIV---LAPMYKL 276 (353)
T ss_pred c--------------HHHHHHhhh----cceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEE---ecchhhc
Confidence 2 234444432 113333333 777888665433 56778888999999986 3455443
No 396
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.27 E-value=27 Score=34.95 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHhccccccccCCh--HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhh
Q 011669 116 CHPYVVDSIVNQIKRIQHSTVLYLNH--AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY 181 (480)
Q Consensus 116 ~~p~v~~A~~~~~~~~~~~~~~~~~~--~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~ 181 (480)
.|-+|.+|+.+.-++... ..+... ...|..--|.++++.+ .++++++||+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA~--FVGSrQWIGStEis~vLn~ll~~~-skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAK--FVGSRQWIGSTEISFVLNELLKLE-SKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccc--eecccceecchhHHHHHHHHhccc-eEEEEeccccHHHHHHHHHHHHh
Confidence 567888888875555311 111111 1134444456666543 47999999999999999999865
No 397
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=57.82 E-value=37 Score=27.77 Aligned_cols=52 Identities=17% Similarity=0.317 Sum_probs=33.7
Q ss_pred HHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccc
Q 011669 148 EALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201 (480)
Q Consensus 148 e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~ 201 (480)
+.+....+.+..-|++|.+|..|-..+..+... |..++..+.++|-++....
T Consensus 55 ~~l~~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~v~~l~gG~~~~~~~~ 106 (117)
T cd01522 55 AELEEKVGKDRPVLLLCRSGNRSIAAAEAAAQA--GFTNVYNVLEGFEGDLDAA 106 (117)
T ss_pred HHHHhhCCCCCeEEEEcCCCccHHHHHHHHHHC--CCCeEEECcCceecCCCCC
Confidence 344443333445677788888777766655433 6778888899997776544
No 398
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=47.65 E-value=2.2e+02 Score=25.88 Aligned_cols=17 Identities=6% Similarity=-0.025 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhCCEEEE
Q 011669 277 LPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 277 l~~l~~l~~~~gillI~ 293 (480)
+.++.+.++++|+.+|.
T Consensus 125 v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 125 IVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 78889999999999985
No 399
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=46.41 E-value=37 Score=30.49 Aligned_cols=56 Identities=16% Similarity=0.199 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHccCCCceEEEEEcccCCC----Cc-ceeCCCChHHHHHHHHHHhCCEEE
Q 011669 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGV----GG-IIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~----~G-~~~~~~~~l~~l~~l~~~~gillI 292 (480)
+.+.+.++++++.........|++.|.... ++ ....-..|-+.++++|+++|+.++
T Consensus 90 ~~~~~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 90 TTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 344566666665432234566777764311 11 111234667899999999998885
No 400
>PLN02672 methionine S-methyltransferase
Probab=45.69 E-value=1.3e+02 Score=35.02 Aligned_cols=48 Identities=10% Similarity=-0.069 Sum_probs=30.4
Q ss_pred HHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 242 DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 242 ~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
.+.++|++. ++..|+.---+.+.- +-.-++.|.+.+++.|+.++.|+.
T Consensus 518 ~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 518 LVIELIKKL---KPQVVVTGMADFEMR----TSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHHhC---CCeEEEEeccchhhh----hHHHHHHHHHHHHhhCcEEEEehh
Confidence 445556543 445555443444321 222378899999999999999974
No 401
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=45.11 E-value=28 Score=31.56 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=28.4
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
..++||||-.+-.|+ ... .+++.++++|||+.+|.
T Consensus 156 ~Pa~VicEi~~~dG~-mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMNDDGT-MAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCCCcc-ccC----hHHHHHHHHHcCCcEEE
Confidence 679999998776554 444 78899999999999984
No 402
>smart00642 Aamy Alpha-amylase domain.
Probab=42.37 E-value=48 Score=29.21 Aligned_cols=46 Identities=13% Similarity=-0.080 Sum_probs=33.0
Q ss_pred ceEEEEEcccCCCCc-------ce----------eCCCChHHHHHHHHHHhCCEEEEcccccC
Q 011669 254 HVAGFLSESIQGVGG-------II----------ELAPGYLPAVYKSIKKAGGLCIADEVQAG 299 (480)
Q Consensus 254 ~~a~vi~epi~~~~G-------~~----------~~~~~~l~~l~~l~~~~gillI~DEv~tg 299 (480)
.+.+|.+.|++.... .- .-+.+.++++.+-|+++|+-+|+|=|...
T Consensus 32 G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 32 GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 577899999764331 10 01225589999999999999999988663
No 403
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=42.23 E-value=2.4e+02 Score=27.18 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=58.6
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEc--CCcccccccccccccCCCccccccCCCeeEe
Q 011669 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLR--NAYHGNAAGTMGATAQSNWKFNVVQTGVHHA 222 (480)
Q Consensus 145 ~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~--~~yhG~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (480)
.+++.-+++++.+ + +++|.|-|..+...|+.|.....+.+|++.+ |.+.|..+ +..+.. .|++..
T Consensus 98 ~I~~~a~~~I~~g-~-~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~----------~GI~vt 164 (275)
T PRK08335 98 EIGNIGSELIDDG-D-VIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEF----------LGIEFE 164 (275)
T ss_pred HHHHHHHHHcCCC-C-EEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHH----------CCCCEE
Confidence 3444445555532 3 5677666666777777665433345666654 55555444 332221 244333
Q ss_pred cCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE--EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 223 LNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL--SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 223 ~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
..+| . .+-.++. ++-.|+ .+-+..+|+.+. .-+- -.+.-+|+.||+.+++
T Consensus 165 lI~D---------s-----a~~~~m~-----~vd~VivGAD~I~~nG~v~N-KiGT-~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 165 VITD---------A-----QLGLFAK-----EATLALVGADNVTRDGYVVN-KAGT-YLLALACHDNGVPFYV 216 (275)
T ss_pred EEec---------c-----HHHHHHH-----hCCEEEECccEEecCCCEee-hhhH-HHHHHHHHHcCCCEEE
Confidence 3322 1 1222232 122333 456766666553 2222 3456788999999985
No 404
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=41.44 E-value=48 Score=32.49 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=27.0
Q ss_pred EEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEcc
Q 011669 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 257 ~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DE 295 (480)
+|++....+.+ .+.++..+|.++|++.|+.+|+|-
T Consensus 132 ~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~ 166 (310)
T COG1105 132 IVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDT 166 (310)
T ss_pred EEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEEC
Confidence 35555444433 377899999999999999999994
No 405
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=40.64 E-value=1.3e+02 Score=29.74 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=24.2
Q ss_pred ceEEEE--EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFL--SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
++-.|+ .+.+..+||.+. .-+ --.++-+|++||+.+++
T Consensus 215 ~Vd~VivGAd~I~aNG~v~N-KiG-T~~lAl~Ak~~~VPfyV 254 (329)
T PRK06371 215 EIDLVIVGADRIASNGDFAN-KIG-TYEKAVLAKVNGIPFYV 254 (329)
T ss_pred CCCEEEECccEEecCCCEee-hhh-HHHHHHHHHHcCCCEEE
Confidence 344444 456777776653 222 23567788999999985
No 406
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=40.08 E-value=65 Score=25.70 Aligned_cols=53 Identities=9% Similarity=0.150 Sum_probs=33.7
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccccc
Q 011669 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG 200 (480)
Q Consensus 145 ~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~ 200 (480)
++.+.+.. ++.+...+++|.+|..+..++..+.+. |-+++..+.+++.+|...
T Consensus 47 ~l~~~~~~-~~~~~~ivv~c~~g~~s~~a~~~L~~~--G~~~v~~l~GG~~~w~~~ 99 (108)
T PRK00162 47 SLGAFMRQ-ADFDTPVMVMCYHGNSSQGAAQYLLQQ--GFDVVYSIDGGFEAWRRT 99 (108)
T ss_pred HHHHHHHh-cCCCCCEEEEeCCCCCHHHHHHHHHHC--CchheEEecCCHHHHHhc
Confidence 34444433 444556777888888776666554433 666788889988766543
No 407
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=39.55 E-value=1.2e+02 Score=27.46 Aligned_cols=82 Identities=20% Similarity=0.291 Sum_probs=42.9
Q ss_pred eCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCCh-HHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Q 011669 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMPGNLKVVFFTNSGTEANEL 173 (480)
Q Consensus 95 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~ 173 (480)
+.+|.++||+++|.+++ | .||+-+.+... ...-.+. ....+.+-+ +.+.......++-+... .
T Consensus 41 ~i~g~~~LDlFAGSGaL--G------lEAlSRGA~~~---~~vE~~~~a~~~l~~N~-~~l~~~~~~~~~~~da~----~ 104 (187)
T COG0742 41 EIEGARVLDLFAGSGAL--G------LEALSRGAARV---VFVEKDRKAVKILKENL-KALGLEGEARVLRNDAL----R 104 (187)
T ss_pred ccCCCEEEEecCCccHh--H------HHHHhCCCceE---EEEecCHHHHHHHHHHH-HHhCCccceEEEeecHH----H
Confidence 47899999999998865 3 45655544332 1111222 333344443 33432233334444333 3
Q ss_pred HHHHHHhhcCC--ceEEEEcCCcc
Q 011669 174 AIMMARLYTGC--NDIISLRNAYH 195 (480)
Q Consensus 174 Alk~ar~~~~~--~~ii~~~~~yh 195 (480)
+++ ....+ -++|..+|-|+
T Consensus 105 ~L~---~~~~~~~FDlVflDPPy~ 125 (187)
T COG0742 105 ALK---QLGTREPFDLVFLDPPYA 125 (187)
T ss_pred HHH---hcCCCCcccEEEeCCCCc
Confidence 333 22233 67888888886
No 408
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=38.43 E-value=2.3e+02 Score=27.38 Aligned_cols=46 Identities=24% Similarity=0.159 Sum_probs=36.3
Q ss_pred EEEEEcccCCCCcceeCCCChHHHHHHHHHHhC-CEEEEcccccCccc
Q 011669 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAG-GLCIADEVQAGFAR 302 (480)
Q Consensus 256 a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~g-illI~DEv~tgfgr 302 (480)
.-+++|..-|.|..+...-+.|++|.+++++.+ +-++.|=+|+ |.+
T Consensus 136 v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~-~Aa 182 (280)
T COG0648 136 VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA-FAA 182 (280)
T ss_pred CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh-hhc
Confidence 456667777777667777788999999999987 9999998876 443
No 409
>PLN02160 thiosulfate sulfurtransferase
Probab=37.69 E-value=76 Score=26.84 Aligned_cols=50 Identities=10% Similarity=0.108 Sum_probs=34.0
Q ss_pred HHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccccccc
Q 011669 151 ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTM 202 (480)
Q Consensus 151 ~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~ 202 (480)
.+.++.+..-|++|.+|.-+..++..+... |-.++..+.|++.+|....+
T Consensus 75 ~~~~~~~~~IivyC~sG~RS~~Aa~~L~~~--G~~~v~~l~GG~~~W~~~g~ 124 (136)
T PLN02160 75 SSLLNPADDILVGCQSGARSLKATTELVAA--GYKKVRNKGGGYLAWVDHSF 124 (136)
T ss_pred HhccCCCCcEEEECCCcHHHHHHHHHHHHc--CCCCeeecCCcHHHHhhCCC
Confidence 333344456788899998888877666433 66678788888877655444
No 410
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=37.53 E-value=2.1e+02 Score=27.45 Aligned_cols=120 Identities=13% Similarity=0.076 Sum_probs=58.9
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccccc-ccccccCCCccccccCCCeeEec
Q 011669 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG-TMGATAQSNWKFNVVQTGVHHAL 223 (480)
Q Consensus 145 ~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 223 (480)
..++...+++.. ..++.|-|-|..+..+|+.|.....+-+|++.+..-++.... +..+. ..|+....
T Consensus 96 ~I~~~~~~~I~~--~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~----------~~gi~v~~ 163 (282)
T PF01008_consen 96 KIADHASELIND--GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELA----------EAGIPVTL 163 (282)
T ss_dssp HHHHHHHCCC-T--TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHH----------HTT-EEEE
T ss_pred HHHHHHHHhccC--CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhh----------hcceeEEE
Confidence 334444444532 457788888888999988876643445677765444332211 11111 12444443
Q ss_pred CCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEc
Q 011669 224 NPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294 (480)
Q Consensus 224 ~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~D 294 (480)
.++ ..+-..+.. .-+...+=.|.+..+||.+. .-+- ..++-+|+++++.+++=
T Consensus 164 i~d--------------~~~~~~m~~--~vd~VliGad~v~~nG~v~n-k~Gt-~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 164 IPD--------------SAVGYVMPR--DVDKVLIGADAVLANGGVVN-KVGT-LQLALAAKEFNVPVYVL 216 (282)
T ss_dssp E-G--------------GGHHHHHHC--TESEEEEE-SEEETTS-EEE-ETTH-HHHHHHHHHTT-EEEEE
T ss_pred Eec--------------hHHHHHHHH--hCCeeEEeeeEEecCCCEee-hhhH-HHHHHHHHhhCCCEEEE
Confidence 332 123334442 01333444556777777654 4443 45667899999999863
No 411
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=37.32 E-value=4e+02 Score=26.03 Aligned_cols=121 Identities=17% Similarity=0.183 Sum_probs=61.9
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcC--CcccccccccccccCCCccccccCCCeeE
Q 011669 144 ADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN--AYHGNAAGTMGATAQSNWKFNVVQTGVHH 221 (480)
Q Consensus 144 ~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~--~yhG~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (480)
..+++.-++++..+ + +++|-|-|..+...|+.|.....+-+|++.+. .+.|.. .+..+. ..|++.
T Consensus 103 ~~I~~~a~~~i~~g-~-~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~-~a~~L~----------~~gI~v 169 (301)
T TIGR00511 103 ERIGEIGAKRIRDG-D-VVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHI-TAKELR----------DYGIPV 169 (301)
T ss_pred HHHHHHHHHHcCCC-C-EEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHH-HHHHHH----------HCCCCE
Confidence 33444444555432 3 66777777778888876655434456666543 233311 111111 124444
Q ss_pred ecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE--EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE-ccccc
Q 011669 222 ALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL--SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA-DEVQA 298 (480)
Q Consensus 222 ~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~-DEv~t 298 (480)
...++ ..+-.++. ++-.|+ .+.+..+||.+. .-+ --.++-+|+.|++.+++ =|.+.
T Consensus 170 tlI~D--------------sa~~~~m~-----~vd~VivGad~v~~nG~v~n-kiG-T~~lA~~Ak~~~vPv~V~a~~~K 228 (301)
T TIGR00511 170 TLIVD--------------SAVRYFMK-----EVDHVVVGADAITANGALIN-KIG-TSQLALAAREARVPFMVAAETYK 228 (301)
T ss_pred EEEeh--------------hHHHHHHH-----hCCEEEECccEEecCCCEEE-HHh-HHHHHHHHHHhCCCEEEEcccce
Confidence 33332 12223333 222333 566777777664 222 23567788999999885 34443
No 412
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=37.05 E-value=74 Score=23.73 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=28.5
Q ss_pred CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 156 GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 156 ~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
.+-..|+++++|..|...+-.+... |..++.+++|+|.++
T Consensus 49 ~~~~vv~~c~~~~~a~~~~~~l~~~--G~~~v~~l~gG~~~w 88 (89)
T cd00158 49 KDKPIVVYCRSGNRSARAAKLLRKA--GGTNVYNLEGGMLAW 88 (89)
T ss_pred CCCeEEEEeCCCchHHHHHHHHHHh--CcccEEEecCChhhc
Confidence 3445677788888887776665543 667888889988664
No 413
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=36.99 E-value=3.7e+02 Score=26.73 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=16.8
Q ss_pred CCCChHHHHHHHHHHhCCEEEEcc
Q 011669 272 LAPGYLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 272 ~~~~~l~~l~~l~~~~gillI~DE 295 (480)
|...-+.++++.++++++.+|.|.
T Consensus 196 pqltAv~~~a~aa~~~~v~VIaDG 219 (343)
T TIGR01305 196 PQLSAVIECADAAHGLKGHIISDG 219 (343)
T ss_pred CHHHHHHHHHHHhccCCCeEEEcC
Confidence 333445666666677899999995
No 414
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=36.97 E-value=3.8e+02 Score=26.29 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcC--Ccc
Q 011669 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN--AYH 195 (480)
Q Consensus 118 p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~--~yh 195 (480)
.++.+.+.+.++.+... .......+++.-++++..+ .+++|-|-|..+...|+.|.....+.+|++.+. .+.
T Consensus 86 ~~~k~~l~e~~~~~~~e----~~~~~~~I~~~a~~~i~~g--~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~ 159 (310)
T PRK08535 86 EEARESVIERAEEFIES----SENAVEKIGEIGAKRIRDG--DVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQ 159 (310)
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCC--CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhh
Confidence 55666665555543110 1122334444445555432 367778777788888876654334456666543 223
Q ss_pred cccccccccccCCCccccccCCCeeEecCCCCcCCCCCCChHHHHHHHHHHHHccCCCceEEEE--EcccCCCCcceeCC
Q 011669 196 GNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL--SESIQGVGGIIELA 273 (480)
Q Consensus 196 G~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~d~~~~~~~le~~i~~~~~~~~a~vi--~epi~~~~G~~~~~ 273 (480)
|.. .+..+ ...|+.....+| ..+-.++. ++-.|+ .+.+..+||.+. .
T Consensus 160 G~~-~a~~L----------~~~GI~vtlI~D--------------sav~~~m~-----~vd~VivGAd~v~~nG~v~n-k 208 (310)
T PRK08535 160 GHI-TAKEL----------AEYGIPVTLIVD--------------SAVRYFMK-----DVDKVVVGADAITANGAVIN-K 208 (310)
T ss_pred HHH-HHHHH----------HHCCCCEEEEeh--------------hHHHHHHH-----hCCEEEECccEEecCCCEEe-H
Confidence 311 11111 112444433332 12333343 233333 456777776654 2
Q ss_pred CChHHHHHHHHHHhCCEEEE
Q 011669 274 PGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~ 293 (480)
-+ --.++-+|+.|++.+++
T Consensus 209 iG-T~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 209 IG-TSQIALAAHEARVPFMV 227 (310)
T ss_pred Hh-HHHHHHHHHHhCCCEEE
Confidence 22 24567788999999885
No 415
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=36.96 E-value=85 Score=22.68 Aligned_cols=48 Identities=10% Similarity=0.078 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 428 ETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 428 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
...++.+.|.+.|+-+.--.....-++++ +.+.+++.++++.+|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is--~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQ--FVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEE--EEEEHHHHHHHHHHHHHHH
Confidence 45678888999998873221112345666 6789999999999998765
No 416
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=36.65 E-value=79 Score=24.27 Aligned_cols=42 Identities=21% Similarity=0.366 Sum_probs=30.1
Q ss_pred CCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 154 MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 154 ~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++.+-.-|++|.+|..|..++..+.+. |.+.+..+++++.++
T Consensus 53 ~~~~~~ivv~c~~g~~s~~a~~~l~~~--G~~~v~~l~gG~~~w 94 (96)
T cd01444 53 LDRDRPVVVYCYHGNSSAQLAQALREA--GFTDVRSLAGGFEAW 94 (96)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHc--CCceEEEcCCCHHHh
Confidence 454556788888888888777666554 666788888887654
No 417
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.22 E-value=3e+02 Score=24.15 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Q 011669 144 ADFAEALASKMPGNLKVVFFTNSGTEANELA 174 (480)
Q Consensus 144 ~~l~e~L~~~~~~~~~~v~f~~sGseA~~~A 174 (480)
..+++.|.+.++.+.+..-+.-+|..+-+..
T Consensus 27 ~~l~~~l~~~~~~~~~~~n~g~~G~t~~~~~ 57 (191)
T cd01836 27 GQLARGLAAITGRGVRWRLFAKTGATSADLL 57 (191)
T ss_pred HHHHHHHHHhhCCceEEEEEecCCcCHHHHH
Confidence 3456666665544455555666777665543
No 418
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=35.88 E-value=50 Score=28.73 Aligned_cols=55 Identities=7% Similarity=0.019 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHccCCCceEEEEEccc-CCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 238 MYAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 238 ~~~~~le~~i~~~~~~~~a~vi~epi-~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
.+.+.++++++.........+++.+. ....+. ..-..+-+.++++|+++++.++-
T Consensus 85 ~~~~~l~~li~~~~~~~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~d 140 (177)
T cd01822 85 QTRANLRQMIETAQARGAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLVP 140 (177)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEec
Confidence 34455666665332224556666542 222121 12345667888999999987663
No 419
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=35.35 E-value=1.1e+02 Score=26.29 Aligned_cols=59 Identities=20% Similarity=0.173 Sum_probs=39.2
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccccccccccc
Q 011669 144 ADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGAT 205 (480)
Q Consensus 144 ~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~~~~~~ 205 (480)
.+|.+.+.+ ++.+-..|++|.+|.-|-..|-.+.. .|..+|.+++|++.+|......+.
T Consensus 37 ~~l~~~l~~-l~~~~~vVv~c~~g~~a~~aa~~L~~--~G~~~v~~L~GG~~aW~~~g~pl~ 95 (145)
T cd01535 37 AQLAQALEK-LPAAERYVLTCGSSLLARFAAADLAA--LTVKPVFVLEGGTAAWIAAGLPVE 95 (145)
T ss_pred HHHHHHHHh-cCCCCCEEEEeCCChHHHHHHHHHHH--cCCcCeEEecCcHHHHHHCCCCcc
Confidence 455555555 34445677778787666655544433 266689999999999988766554
No 420
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=33.50 E-value=1.3e+02 Score=26.96 Aligned_cols=85 Identities=20% Similarity=0.208 Sum_probs=39.3
Q ss_pred CCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHH
Q 011669 96 ENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175 (480)
Q Consensus 96 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Al 175 (480)
.+|.++||+++|.|.+ | .||+.+-+... ...-.++....+.++=.+.++...+..++......+..
T Consensus 41 ~~g~~vLDLFaGSGal--G------lEALSRGA~~v---~fVE~~~~a~~~i~~N~~~l~~~~~~~v~~~d~~~~l~--- 106 (183)
T PF03602_consen 41 LEGARVLDLFAGSGAL--G------LEALSRGAKSV---VFVEKNRKAIKIIKKNLEKLGLEDKIRVIKGDAFKFLL--- 106 (183)
T ss_dssp HTT-EEEETT-TTSHH--H------HHHHHTT-SEE---EEEES-HHHHHHHHHHHHHHT-GGGEEEEESSHHHHHH---
T ss_pred cCCCeEEEcCCccCcc--H------HHHHhcCCCeE---EEEECCHHHHHHHHHHHHHhCCCcceeeeccCHHHHHH---
Confidence 7899999999998876 2 45554433321 22223444444444444444433233344444433332
Q ss_pred HHHHhhcCCceEEEEcCCcc
Q 011669 176 MMARLYTGCNDIISLRNAYH 195 (480)
Q Consensus 176 k~ar~~~~~~~ii~~~~~yh 195 (480)
+.. ....+-++|..+|-|.
T Consensus 107 ~~~-~~~~~fDiIflDPPY~ 125 (183)
T PF03602_consen 107 KLA-KKGEKFDIIFLDPPYA 125 (183)
T ss_dssp HHH-HCTS-EEEEEE--STT
T ss_pred hhc-ccCCCceEEEECCCcc
Confidence 221 1235567888887773
No 421
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=33.22 E-value=45 Score=29.70 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=29.2
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCCCCcceeCC----CChHHHHHHHHHHhCCEEEE
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELA----PGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~----~~~l~~l~~l~~~~gillI~ 293 (480)
.+.+++.+... .++..||+++.+.-.+.-.-+ ..+++.+.++|+++|+.+|+
T Consensus 129 ~~~l~~~~~~~--~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL--YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT------SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc--CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45566666531 357899999987654321111 24788999999999988774
No 422
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=32.28 E-value=3e+02 Score=24.03 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=13.9
Q ss_pred ChHHHHHHHHHHhCCEEE
Q 011669 275 GYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 275 ~~l~~l~~l~~~~gillI 292 (480)
.|-+.+.++|+++++.+|
T Consensus 143 ~~~~~~~~~a~~~~~~~i 160 (199)
T cd01838 143 QYAEACVEVAEELGVPVI 160 (199)
T ss_pred HHHHHHHHHHHHhCCcEE
Confidence 344578899999998777
No 423
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=32.19 E-value=37 Score=36.65 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=28.6
Q ss_pred CCChHHHHHHHHHHhCCEEEEcccccCccccC
Q 011669 273 APGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304 (480)
Q Consensus 273 ~~~~l~~l~~l~~~~gillI~DEv~tgfgr~G 304 (480)
+++-++++.+-|+++||-+|+|=|+..|+..|
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 34678999999999999999999999998766
No 424
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=31.86 E-value=1.3e+02 Score=28.71 Aligned_cols=51 Identities=14% Similarity=0.030 Sum_probs=37.7
Q ss_pred HHHHHHHHccCCCceEEEEEcccCCCCcc--eeCCCChHHHHHHHHHHhCCEEE
Q 011669 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGI--IELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 241 ~~le~~i~~~~~~~~a~vi~epi~~~~G~--~~~~~~~l~~l~~l~~~~gillI 292 (480)
+.|.+++... +...-.+|++|.+|+|.. -.+...|...|.+|-+.-|+.+|
T Consensus 19 ~~l~~a~~~~-p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 19 DPLYDAIAAH-PSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHHhcC-CCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 4566666654 445678999999999843 34788999999999766676665
No 425
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=31.50 E-value=3.1e+02 Score=22.99 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Q 011669 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEA 170 (480)
Q Consensus 140 ~~~~~~l~e~L~~~~~~~~~~v~f~~sGseA 170 (480)
.+.+.+.++.+++.+..+-.-.++.|++|.+
T Consensus 18 ~~~i~~aa~~i~~~~~~gg~i~~~G~G~S~~ 48 (138)
T PF13580_consen 18 AEAIEKAADLIAEALRNGGRIFVCGNGHSAA 48 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEEESTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCchhhh
Confidence 3567778888888775554555666666643
No 426
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=30.88 E-value=1.1e+02 Score=23.94 Aligned_cols=43 Identities=14% Similarity=0.229 Sum_probs=28.3
Q ss_pred HhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 152 SKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 152 ~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
..++.+-..|++|.+|.-+..++-.+.+. |-+ +..+.|++.+|
T Consensus 56 ~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~-~~~l~GG~~~W 98 (100)
T cd01523 56 DQLPDDQEVTVICAKEGSSQFVAELLAER--GYD-VDYLAGGMKAW 98 (100)
T ss_pred hhCCCCCeEEEEcCCCCcHHHHHHHHHHc--Cce-eEEeCCcHHhh
Confidence 33454556788888888877766655433 444 77788888665
No 427
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=30.54 E-value=4.2e+02 Score=24.08 Aligned_cols=41 Identities=12% Similarity=0.042 Sum_probs=26.7
Q ss_pred CceEEEEEcccCCCCcceeCC-----------CChHHHHHHHHHHhCCEEEE
Q 011669 253 GHVAGFLSESIQGVGGIIELA-----------PGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 253 ~~~a~vi~epi~~~~G~~~~~-----------~~~l~~l~~l~~~~gillI~ 293 (480)
.++..|++|++..--...... ..++..|..+|+++++.+|+
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 478899999986521110011 12356689999999988874
No 428
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=30.24 E-value=4.2e+02 Score=25.04 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=32.9
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHH-hCCEEEEcccccCccccC
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKK-AGGLCIADEVQAGFARTG 304 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~-~gillI~DEv~tgfgr~G 304 (480)
+.+.+-+..+...+|...+......--+.+++. ...++++| ++=||+.+
T Consensus 166 d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~sKf~~~~ 215 (253)
T COG1349 166 DKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SSKFGRVA 215 (253)
T ss_pred cEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CCccCCce
Confidence 677777888888888776555544444444444 46888899 55677765
No 429
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit. Aldolases specific for D-tagatose-bisphosphate occur in distinct pathways in Escherichia coli and other bacteria, one for the degradation of galactitol (formerly dulcitol) and one for degradation of N-acetyl-galactosamine and D-galactosamine. This family represents a protein of both systems that behaves as a non-catalytic subunit of D-tagatose-bisphosphate aldolase, required both for full activity and for good stability of the aldolase. Note that members of this protein family appear in public databases annotated as putative tagatose 6-phosphate kinases, possibly in error.
Probab=29.91 E-value=6.2e+02 Score=25.93 Aligned_cols=183 Identities=13% Similarity=0.099 Sum_probs=94.5
Q ss_pred CCCCCHHHHHHHHHHHHhcc------------ccccccC---ChHHHHHHHHHHHhCCCCCCEEEEeC-----------C
Q 011669 113 CGHCHPYVVDSIVNQIKRIQ------------HSTVLYL---NHAIADFAEALASKMPGNLKVVFFTN-----------S 166 (480)
Q Consensus 113 lGh~~p~v~~A~~~~~~~~~------------~~~~~~~---~~~~~~l~e~L~~~~~~~~~~v~f~~-----------s 166 (480)
.+-.||.|++|..++..... ...+.|+ ...-.++.+.+++..+-+.++++++. .
T Consensus 18 VCsahp~VieAAl~~a~~~~~pvLiEAT~NQVnq~GGYTGmtP~dF~~~V~~iA~~~gf~~~~iiLggDHlGPn~Wq~lp 97 (420)
T TIGR02810 18 VCSAHPLVLEAAIRRARASGTPVLIEATSNQVNQFGGYTGMTPADFRDFVETIADRIGFPRDRLILGGDHLGPNPWQHLP 97 (420)
T ss_pred ECCCCHHHHHHHHHHHhhcCCcEEEEeccccccccCCcCCCCHHHHHHHHHHHHHHcCCChhcEEeecCCCCCccccCCC
Confidence 35679999999666554411 0011222 33445777778888765555666642 6
Q ss_pred HHHHHHHHHHHHHhhc-CCceEEEEcCCccccccccccccc-------C-------CCcc--ccccCCCeeE---ecCCC
Q 011669 167 GTEANELAIMMARLYT-GCNDIISLRNAYHGNAAGTMGATA-------Q-------SNWK--FNVVQTGVHH---ALNPD 226 (480)
Q Consensus 167 GseA~~~Alk~ar~~~-~~~~ii~~~~~yhG~~~~~~~~~~-------~-------~~~~--~~~~~~g~~~---~~~p~ 226 (480)
..||++.|-++.+.+- -+-+.|-.+++-...... ..+.. . ..++ ...+.+.... +|.|-
T Consensus 98 a~eAM~~A~~li~ayV~AGF~kIHLD~Sm~ca~d~-~~L~d~~vAeRaa~L~~~aE~~~~~~~~~~~~vYvIGTEvP~pG 176 (420)
T TIGR02810 98 ADEAMAKAAALVDAYVEAGFTKIHLDASMGCAGDP-APLDDATVAERAARLCAVAEAAATDRRGETKPVYVIGTEVPVPG 176 (420)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCCCccCCC-ccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEeccccCCCC
Confidence 7899999999887663 233445555554322211 11000 0 0000 0111111111 11111
Q ss_pred CcCCCCC----CCh---HHHHHHHHHHHHccCC----CceEEEEEcc--cCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 227 PYRGVFG----ADG---EMYAKDVQDLIDFGTS----GHVAGFLSES--IQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 227 ~~~~~~~----~d~---~~~~~~le~~i~~~~~----~~~a~vi~ep--i~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
....... ... ...++..++.+++.+- .++.++++-| .....++..+.++-.++|.+++++++.++.
T Consensus 177 Ga~~~~~~~~vTs~e~~~~ti~~h~~af~~~GL~~aw~rvi~~VVQpGvef~~~~V~~y~~~~A~~Ls~~~~~~~~lvf- 255 (420)
T TIGR02810 177 GALEALQTLAVTTPEAARATLRAHRKAFAARGLEDAWPRVIALVVQPGVEFDHHNVIHYQPERAQALSQVIDNTPGLVF- 255 (420)
T ss_pred chhhhccccCCCCHHHHHHHHHHHHHHHHHcCchhhhccceEEEecCCeeECCCceeecCHHHHHHHHHHHHhCCCcee-
Confidence 1100000 011 1233444455554321 2588888888 234456677888889999999999988776
Q ss_pred ccccc
Q 011669 294 DEVQA 298 (480)
Q Consensus 294 DEv~t 298 (480)
|.|+
T Consensus 256 -EaHS 259 (420)
T TIGR02810 256 -EAHS 259 (420)
T ss_pred -ecCC
Confidence 4443
No 430
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=29.68 E-value=1.6e+02 Score=23.03 Aligned_cols=40 Identities=15% Similarity=0.322 Sum_probs=28.8
Q ss_pred CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccc
Q 011669 157 NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (480)
Q Consensus 157 ~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~ 198 (480)
+...|++|++|..|...+..+.+. |-+++..++|++.++.
T Consensus 58 ~~~vv~~c~~g~rs~~~~~~l~~~--G~~~v~~l~GG~~~w~ 97 (101)
T cd01528 58 DKDIVVLCHHGGRSMQVAQWLLRQ--GFENVYNLQGGIDAWS 97 (101)
T ss_pred CCeEEEEeCCCchHHHHHHHHHHc--CCccEEEecCCHHHHh
Confidence 345788888988877776665543 6667888889887764
No 431
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=29.56 E-value=1.3e+02 Score=23.90 Aligned_cols=52 Identities=17% Similarity=0.151 Sum_probs=30.2
Q ss_pred HHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHhhcCCce-EEEEcCCccccc
Q 011669 145 DFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLYTGCND-IISLRNAYHGNA 198 (480)
Q Consensus 145 ~l~e~L~~~~~-~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~-ii~~~~~yhG~~ 198 (480)
++.+.+.+... .+..-|++|.+|..+..++..+. .. |-++ +..++|++.+|.
T Consensus 53 ~l~~~~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~-~~-G~~~~v~~l~gG~~~W~ 106 (109)
T cd01533 53 ELVLRVGELAPDPRTPIVVNCAGRTRSIIGAQSLI-NA-GLPNPVAALRNGTQGWT 106 (109)
T ss_pred HHHHHHHhcCCCCCCeEEEECCCCchHHHHHHHHH-HC-CCCcceeEecCCHHHHH
Confidence 34444444432 23356788889988765554443 32 5444 777888887654
No 432
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=29.29 E-value=5.8e+02 Score=25.36 Aligned_cols=53 Identities=8% Similarity=0.198 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcc
Q 011669 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195 (480)
Q Consensus 143 ~~~l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yh 195 (480)
+.++.+++.+.-....+.++-.+||-++..++..+...+.-+...+.++++|.
T Consensus 45 l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~ 97 (343)
T TIGR03573 45 LEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWN 97 (343)
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCC
Confidence 34444444443322267888889999998887555444422333366776653
No 433
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=29.24 E-value=4.6e+02 Score=26.45 Aligned_cols=38 Identities=16% Similarity=0.071 Sum_probs=23.5
Q ss_pred ceEEEE--EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFL--SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi--~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
.+-.|| .+-+..+||... .-+- -.++-+|++||+++++
T Consensus 246 ~Vd~VivGAD~I~~NG~v~N-KiGT-y~lA~~Ak~~~vPfyV 285 (363)
T PRK05772 246 MVNNVMVGADRILRDGHVFN-KIGT-FKEAVIAHELGIPFYA 285 (363)
T ss_pred CCCEEEECccEEecCCCEee-hhhh-HHHHHHHHHhCCCEEE
Confidence 344444 455766666553 2222 3467788999999886
No 434
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=29.21 E-value=5.6e+02 Score=25.14 Aligned_cols=29 Identities=17% Similarity=0.057 Sum_probs=23.8
Q ss_pred eeCCCChHHHHHHHHHHhCCEEEEcccccCc
Q 011669 270 IELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300 (480)
Q Consensus 270 ~~~~~~~l~~l~~l~~~~gillI~DEv~tgf 300 (480)
=.|.++.++.+..+++..|+ +.|=||+|-
T Consensus 257 g~p~~e~~e~i~~~~~~eGi--llDpVYtgK 285 (323)
T COG2515 257 GKPNEEDIEAIKLLARLEGI--LLDPVYTGK 285 (323)
T ss_pred CCcCHHHHHHHHHHHHhhCc--ccccccchH
Confidence 34688889999999999887 579999974
No 435
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.11 E-value=21 Score=31.02 Aligned_cols=43 Identities=26% Similarity=0.386 Sum_probs=33.6
Q ss_pred cCCCcceeeeccccc-cCccccccccCHHHHHhhcCCCccccCC
Q 011669 313 HGVVPDIVTMAKGIG-NGIPLGAVVTTPEIAEVLTRRNYFNTFG 355 (480)
Q Consensus 313 ~~~~pDivt~sK~~g-~G~pig~v~~~~~~~~~l~~~~~~~t~~ 355 (480)
..+.||+..+.|+|. .|-|+|+++..+.+...+.....-.|.+
T Consensus 111 C~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~g~~~~~TIG 154 (217)
T COG3155 111 CSVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIFGFPLRLTIG 154 (217)
T ss_pred ceeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHcCCceeEEec
Confidence 357899999999999 7999999999998887765443334444
No 436
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=28.74 E-value=1.8e+02 Score=23.38 Aligned_cols=53 Identities=13% Similarity=0.189 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhC-CCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 143 IADFAEALASKM-PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 143 ~~~l~e~L~~~~-~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
..++.+.+.+.- ..+-..|++|++|.-|...+..+.. .|-+.+..++|++.+|
T Consensus 63 ~~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 116 (118)
T cd01449 63 PEELRALFAALGITPDKPVIVYCGSGVTACVLLLALEL--LGYKNVRLYDGSWSEW 116 (118)
T ss_pred HHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHH--cCCCCeeeeCChHHHh
Confidence 345555555542 2234578888888777766554422 2666788888887554
No 437
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=28.51 E-value=1.7e+02 Score=27.00 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=32.7
Q ss_pred ChHHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 235 DGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 235 d~~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
|.....+.+++++.. .+.+||+.|..... +..+.+-|++.|+.+|.
T Consensus 40 d~~~q~~~i~~~i~~----~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 40 DPEEQIEQIEQAISQ----GVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp THHHHHHHHHHHHHT----TESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred CHHHHHHHHHHHHHh----cCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 444446778888863 58899998876543 45556778889999886
No 438
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=27.88 E-value=4.5e+02 Score=26.80 Aligned_cols=56 Identities=14% Similarity=0.269 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHHhCCEEEEcccccCccccCCCcccccccCCCcceeeeccccccCccccccccCHHHHHhhc
Q 011669 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLT 346 (480)
Q Consensus 274 ~~~l~~l~~l~~~~gillI~DEv~tgfgr~G~~~~~~~~~~~~pDivt~sK~~g~G~pig~v~~~~~~~~~l~ 346 (480)
-.|+.+|..+|++.|+= +-+|.-|.|.. |.|. .|-+.+|+.-|.-+.|+++.+.+.
T Consensus 217 IsFiNEia~ice~~g~D--~~~V~~gIGlD-------------~RIG--~~fl~aG~GyGGsCfPKD~~AL~~ 272 (414)
T COG1004 217 ISFINEIANICEKVGAD--VKQVAEGIGLD-------------PRIG--NHFLNAGFGYGGSCFPKDTKALIA 272 (414)
T ss_pred HHHHHHHHHHHHHhCCC--HHHHHHHcCCC-------------chhh--HhhCCCCCCCCCcCCcHhHHHHHH
Confidence 36899999999998851 11233334322 2222 233334555566677888766554
No 439
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=27.68 E-value=46 Score=30.67 Aligned_cols=91 Identities=16% Similarity=0.069 Sum_probs=48.3
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc---CccccCCCcccccccCCC
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA---GFARTGSHFWGFEAHGVV 316 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t---gfgr~G~~~~~~~~~~~~ 316 (480)
++.++++++ .+-+...+-|-....- . -.+..++++++|++||+.||+++=.. ..+-.| . |.|-.
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~~-~---~~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdG-----V-HlGq~ 90 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSDE-E---YLALAEKLRALCQKYGVPLIINDRVDLALAVGADG-----V-HLGQD 90 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCChH-H---HHHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCE-----E-EcCCc
Confidence 456777776 2333444444332211 0 03446799999999999999875321 111122 0 11211
Q ss_pred -cceeeeccccccCccccccccCHHHHH
Q 011669 317 -PDIVTMAKGIGNGIPLGAVVTTPEIAE 343 (480)
Q Consensus 317 -pDivt~sK~~g~G~pig~v~~~~~~~~ 343 (480)
-.+....|-++.++.+|+-+.+.+-+.
T Consensus 91 D~~~~~ar~~~~~~~iIG~S~h~~eea~ 118 (211)
T COG0352 91 DMPLAEARELLGPGLIIGLSTHDLEEAL 118 (211)
T ss_pred ccchHHHHHhcCCCCEEEeecCCHHHHH
Confidence 122234466777778887776655433
No 440
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=27.67 E-value=2.2e+02 Score=21.61 Aligned_cols=48 Identities=15% Similarity=0.360 Sum_probs=29.4
Q ss_pred HHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 146 FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 146 l~e~L~~~~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
+.+.+.. ++.+...|++|.+|..+...+..+.+. |. ++..++|++-++
T Consensus 41 ~~~~~~~-~~~~~~vvl~c~~g~~a~~~a~~L~~~--G~-~v~~l~GG~~~w 88 (90)
T cd01524 41 LRDRLNE-LPKDKEIIVYCAVGLRGYIAARILTQN--GF-KVKNLDGGYKTY 88 (90)
T ss_pred HHHHHHh-cCCCCcEEEEcCCChhHHHHHHHHHHC--CC-CEEEecCCHHHh
Confidence 4444443 343446778888887777666654332 55 788888887544
No 441
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.42 E-value=1.3e+02 Score=21.45 Aligned_cols=48 Identities=17% Similarity=0.066 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 428 ETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 428 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
...++...|.+.|+-+.--.....-..++ +.+.+++.+.++..|.+.+
T Consensus 16 ~~~~i~~aL~~~~I~v~~i~~g~s~~sis--~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 16 ILERAFHVLYTKGVNVQMISQGASKVNIS--LIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCccceEE--EEEeHHHHHHHHHHHHHHH
Confidence 35678888989997773211112334455 6788999999999998765
No 442
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=27.40 E-value=5.9e+02 Score=24.92 Aligned_cols=37 Identities=11% Similarity=0.043 Sum_probs=24.1
Q ss_pred EcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE-ccccc
Q 011669 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA-DEVQA 298 (480)
Q Consensus 260 ~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~-DEv~t 298 (480)
.|.+..+||.+. .-+ --.++-+|+.|++.+++ =|.+.
T Consensus 205 Ad~v~~nG~v~n-k~G-T~~lA~~Ak~~~vPv~V~a~s~K 242 (303)
T TIGR00524 205 ADRIARNGDVAN-KIG-TYQLAVLAKEFRIPFFVAAPLST 242 (303)
T ss_pred ccEEecCCCEeE-hhh-HHHHHHHHHHhCCCEEEeccccc
Confidence 566777777664 222 23567788999999885 34443
No 443
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.32 E-value=1.3e+02 Score=21.45 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
..++.+.|.+.++.+..-+ ..-++++ +.+.+++.++++.+|.+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~--~s~~~is--~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQA--ANDLNLT--FVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEe--CCCCeEE--EEEeHHHHHHHHHHHHHHH
Confidence 4567777877888775433 2335666 6789999999999998765
No 444
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=26.36 E-value=1.3e+02 Score=23.59 Aligned_cols=51 Identities=14% Similarity=0.348 Sum_probs=29.3
Q ss_pred HHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 145 DFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 145 ~l~e~L~~~~~-~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++.+.+..... .+..-|++|++|.-|...+..+... |-+.|..++|++-+|
T Consensus 53 ~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~~~Gg~~~W 104 (106)
T cd01519 53 EFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSL--GYENVGNYPGSWLDW 104 (106)
T ss_pred HHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHc--CCccceecCCcHHHH
Confidence 44444443332 2345677888887776665544333 666677777766443
No 445
>COG0216 PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis]
Probab=25.97 E-value=3e+02 Score=27.25 Aligned_cols=86 Identities=20% Similarity=0.251 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHhccccccccCChHHHHHHHHHHHhC-CC---CCC----EEEEeCCHHHHHHHHHHHHHhhcC-----
Q 011669 117 HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM-PG---NLK----VVFFTNSGTEANELAIMMARLYTG----- 183 (480)
Q Consensus 117 ~p~v~~A~~~~~~~~~~~~~~~~~~~~~~l~e~L~~~~-~~---~~~----~v~f~~sGseA~~~Alk~ar~~~~----- 183 (480)
+|++.+-+.+-+..+ .....+|.+.|.-++ |. +-+ ++.-..||.||.-.|--++|.|..
T Consensus 74 D~em~ema~~Ei~~~--------~~~~~~le~~L~~lLlPkDpnd~knvilEIRagtGGdEAalFagDLfrMY~rYAe~k 145 (363)
T COG0216 74 DPEMREMAEEEIKEL--------EAKIEELEEELKILLLPKDPNDDKNIILEIRAGTGGDEAALFAGDLFRMYSRYAESK 145 (363)
T ss_pred CHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhcCCCCCCCCcCeEEEEecCCCchHHHHHHHHHHHHHHHHHHhC
Confidence 455555554444432 234456666666654 42 223 345578999999888888888742
Q ss_pred --CceEEEEcCCccc-ccccccccccCCCc
Q 011669 184 --CNDIISLRNAYHG-NAAGTMGATAQSNW 210 (480)
Q Consensus 184 --~~~ii~~~~~yhG-~~~~~~~~~~~~~~ 210 (480)
+-.|+....+-+| +.-..+...|...|
T Consensus 146 gWk~ei~s~se~~~GG~kEii~~I~G~gvy 175 (363)
T COG0216 146 GWKVEILSASESELGGYKEIIASISGKGVY 175 (363)
T ss_pred CCEEEEeecCcccCCCceEEEEEEeccchh
Confidence 3467777777776 44455566665544
No 446
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=25.96 E-value=1.5e+02 Score=20.70 Aligned_cols=48 Identities=8% Similarity=0.039 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 011669 428 ETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477 (480)
Q Consensus 428 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l 477 (480)
...++.+.|.+.|+-+.--.....-.+++ +...+++.++++++|.+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~~~~s~~~is--~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIAQGSSERNIS--AVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCcccEEE--EEEeHHHHHHHHHHHHHHH
Confidence 35678888999997773211101124555 6788899999999998765
No 447
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=25.69 E-value=92 Score=27.27 Aligned_cols=56 Identities=18% Similarity=0.097 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHcc--CCCceEEEEEcccCCCCcce---------eCCCChHHHHHHHHHHhCCEEE
Q 011669 237 EMYAKDVQDLIDFG--TSGHVAGFLSESIQGVGGII---------ELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 237 ~~~~~~le~~i~~~--~~~~~a~vi~epi~~~~G~~---------~~~~~~l~~l~~l~~~~gillI 292 (480)
+.+.+.++++++.. .......|++.|........ ..-..+-+.++++|+++++.+|
T Consensus 85 ~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 85 EKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 33455666666543 23355667777654322211 0112344567788999998777
No 448
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=25.62 E-value=1.7e+02 Score=25.55 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=31.6
Q ss_pred HHHHHHHhCC--CCCCEEEEeCCHH-HHHHHHHHHHHhhcCCceEEEEcCCccccccc
Q 011669 146 FAEALASKMP--GNLKVVFFTNSGT-EANELAIMMARLYTGCNDIISLRNAYHGNAAG 200 (480)
Q Consensus 146 l~e~L~~~~~--~~~~~v~f~~sGs-eA~~~Alk~ar~~~~~~~ii~~~~~yhG~~~~ 200 (480)
+.+.+.+..+ .+-..|++|.+|. -+..++-. ++. -|..+|..++|++.+|...
T Consensus 103 ~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~-L~~-~G~~~V~~l~GG~~aW~~a 158 (162)
T TIGR03865 103 FRRGLERATGGDKDRPLVFYCLADCWMSWNAAKR-ALA-YGYSNVYWYPDGTDGWQAA 158 (162)
T ss_pred HHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHH-HHh-cCCcceEEecCCHHHHHHc
Confidence 4455544332 2345677788775 34443333 332 2777888999999887543
No 449
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=24.86 E-value=1.9e+02 Score=22.18 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=25.5
Q ss_pred CCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 158 LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 158 ~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
..-|++|.+|..+...+..+.. .|-+ +..++|++.+|
T Consensus 57 ~~iv~~c~~G~rs~~aa~~L~~--~G~~-v~~l~GG~~~W 93 (95)
T cd01534 57 ARIVLADDDGVRADMTASWLAQ--MGWE-VYVLEGGLAAA 93 (95)
T ss_pred CeEEEECCCCChHHHHHHHHHH--cCCE-EEEecCcHHHh
Confidence 3567888888887777666532 2555 77788888665
No 450
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=24.79 E-value=5.6e+02 Score=23.68 Aligned_cols=50 Identities=28% Similarity=0.260 Sum_probs=24.5
Q ss_pred HHHHHHHHHccCCCceEEEEEcccCC-CCc--ceeCCCChHHHHHHHHHHhC--CEEEEc
Q 011669 240 AKDVQDLIDFGTSGHVAGFLSESIQG-VGG--IIELAPGYLPAVYKSIKKAG--GLCIAD 294 (480)
Q Consensus 240 ~~~le~~i~~~~~~~~a~vi~epi~~-~~G--~~~~~~~~l~~l~~l~~~~g--illI~D 294 (480)
.+.++.++.. +-.|++..+++ -+| .++...+-+++++++.+++| +.+.+|
T Consensus 119 ~~~i~~~l~~-----~D~vlvMtV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~~I~vd 173 (220)
T PRK08883 119 LHHLEYIMDK-----VDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEID 173 (220)
T ss_pred HHHHHHHHHh-----CCeEEEEEecCCCCCceecHhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 4667777753 33444444433 334 22222234555555555544 556566
No 451
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=23.82 E-value=2.8e+02 Score=22.04 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCC-CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 145 DFAEALASKMPG-NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 145 ~l~e~L~~~~~~-~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
++.+.+.+..+. +..-|++|.+|..+...+..+... |-+.+.. .+++..+
T Consensus 45 ~l~~~l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~--G~~~v~~-~GG~~~~ 95 (101)
T TIGR02981 45 EIKEHIATAVPDKNDTVKLYCNAGRQSGMAKDILLDM--GYTHAEN-AGGIKDI 95 (101)
T ss_pred HHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHc--CCCeEEe-cCCHHHh
Confidence 444455444332 233567899998888877665543 5455544 4666544
No 452
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=23.52 E-value=63 Score=24.85 Aligned_cols=22 Identities=18% Similarity=0.092 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCEEEEccccc
Q 011669 277 LPAVYKSIKKAGGLCIADEVQA 298 (480)
Q Consensus 277 l~~l~~l~~~~gillI~DEv~t 298 (480)
-++|+++++++|++++.|..-.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5789999999999999998643
No 453
>PF02082 Rrf2: Transcriptional regulator; InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulfovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis sp. (strain PCC 6803) hypothetical protein slr0846. These are small proteins of 12 to 18kDa which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; PDB: 3T8T_A 3T8R_A 3K69_A 3LWF_C 1XD7_A 2Y75_E 1YLF_C.
Probab=23.36 E-value=2.1e+02 Score=21.62 Aligned_cols=41 Identities=24% Similarity=0.197 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHH
Q 011669 428 ETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADY 468 (480)
Q Consensus 428 ~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~ 468 (480)
....+.+.|.+.|++....|..+++.--.+|-.+|-.||-+
T Consensus 41 ~l~kil~~L~~~Gli~s~~G~~GGy~L~~~~~~Itl~dI~~ 81 (83)
T PF02082_consen 41 YLRKILQKLKKAGLIESSRGRGGGYRLARPPEEITLLDIVR 81 (83)
T ss_dssp HHHHHHHHHHHTTSEEEETSTTSEEEESS-CCGSBHHHHHH
T ss_pred HHHHHHHHHhhCCeeEecCCCCCceeecCCHHHCCHHHHHH
Confidence 46778899999999887666655554445566666555543
No 454
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=22.76 E-value=2.2e+02 Score=26.29 Aligned_cols=40 Identities=10% Similarity=-0.090 Sum_probs=27.3
Q ss_pred ceEEEEEcccCCCC-cceeCCC-----ChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFLSESIQGVG-GIIELAP-----GYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi~epi~~~~-G~~~~~~-----~~l~~l~~l~~~~gillI~ 293 (480)
++..|++++++... +.....+ .+++.|+++|+++|+.+|+
T Consensus 123 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 123 GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 67899999987532 1100011 3478899999999998885
No 455
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=22.18 E-value=2.1e+02 Score=20.25 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
..++.+.|.+.|+-+.-... .-..++ +.+.+++.++++.+|.+.+.
T Consensus 18 ~~~if~aL~~~~I~v~~~~~--Se~~is--~~v~~~~~~~av~~Lh~~f~ 63 (64)
T cd04937 18 MAKIVGALSKEGIEILQTAD--SHTTIS--CLVSEDDVKEAVNALHEAFE 63 (64)
T ss_pred HHHHHHHHHHCCCCEEEEEc--CccEEE--EEEcHHHHHHHHHHHHHHhc
Confidence 56788889999988854332 234555 67899999999999988763
No 456
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=22.15 E-value=1.2e+02 Score=27.49 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=27.0
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
..+++|+|=+.- .|.... .+++.+++++||+.+|.
T Consensus 152 ~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 568999998766 455555 89999999999999984
No 457
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=22.14 E-value=2.7e+02 Score=29.64 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=34.0
Q ss_pred HHHHHHHHHccC-CCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccccc
Q 011669 240 AKDVQDLIDFGT-SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA 298 (480)
Q Consensus 240 ~~~le~~i~~~~-~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~t 298 (480)
+.+|++.++... -+-..+|.++-... .+++.++.|+++|++.|+-+++=+++.
T Consensus 358 l~NL~RHIenvr~FGvPvVVAINKFd~------DTe~Ei~~I~~~c~e~Gv~va~~~~~~ 411 (557)
T PRK13505 358 FANLERHIENIRKFGVPVVVAINKFVT------DTDAEIAALKELCEELGVEVALSEVWA 411 (557)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCCC------CCHHHHHHHHHHHHHcCCCEEEecccc
Confidence 355666665321 22345566654422 245579999999999999888777654
No 458
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=22.08 E-value=1.3e+02 Score=27.47 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=27.7
Q ss_pred ceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
..+++|+|=++- .|.... .+++.+++++||+.+|.
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 468999998655 455544 88999999999999983
No 459
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=21.98 E-value=1.9e+02 Score=22.25 Aligned_cols=41 Identities=12% Similarity=-0.005 Sum_probs=27.8
Q ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCcccc
Q 011669 155 PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197 (480)
Q Consensus 155 ~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~ 197 (480)
+.+..-|++|++|..+-..+..+.+ .|-++|..++|++-++
T Consensus 54 ~~~~~ivv~c~~g~~s~~~~~~l~~--~G~~~v~~l~GG~~~W 94 (96)
T cd01529 54 GRATRYVLTCDGSLLARFAAQELLA--LGGKPVALLDGGTSAW 94 (96)
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHH--cCCCCEEEeCCCHHHh
Confidence 3344578888888887666655432 3666788888888665
No 460
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=21.93 E-value=1.5e+02 Score=22.93 Aligned_cols=43 Identities=16% Similarity=0.269 Sum_probs=28.5
Q ss_pred CCCCCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccc
Q 011669 154 MPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (480)
Q Consensus 154 ~~~~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~ 198 (480)
++.+-..|++|++|..+-..+..+.+. +...+..++|++-+|.
T Consensus 51 ~~~~~~iv~~c~~g~~s~~~~~~L~~~--g~~~v~~l~gG~~~W~ 93 (99)
T cd01527 51 LVGANAIIFHCRSGMRTQQNAERLAAI--SAGEAYVLEGGLDAWK 93 (99)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHc--CCccEEEeeCCHHHHH
Confidence 344456788889988777766666544 4446777788775543
No 461
>cd04924 ACT_AK-Arch_2 ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). Included in this CD is the second of two ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). The first or N-terminal ACT domain of these proteins cluster with the ThrA-like ACT 1 domains (ACT_AKi-HSDH-ThrA-like_1) which includes the threonine-sensitive archaeal Methanococcus jannaschii aspartokinase ACT 1 domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.72 E-value=2.1e+02 Score=19.89 Aligned_cols=48 Identities=10% Similarity=0.098 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
...+.+.|.+.|+-+.--.......+++ +.+.+++.++++++|.+.+.
T Consensus 18 ~~~i~~~L~~~~I~v~~i~q~~s~~~is--f~i~~~~~~~~~~~Lh~~~~ 65 (66)
T cd04924 18 AGRVFGALGKAGINVIMISQGSSEYNIS--FVVAEDDGWAAVKAVHDEFG 65 (66)
T ss_pred HHHHHHHHHHCCCCEEEEEecCccceEE--EEEeHHHHHHHHHHHHHHhc
Confidence 4568888889887763221101124555 67888999999999988763
No 462
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=21.65 E-value=4.5e+02 Score=27.60 Aligned_cols=43 Identities=12% Similarity=-0.010 Sum_probs=28.1
Q ss_pred HHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEE
Q 011669 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 241 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI 292 (480)
.+|.++++.....++.+|++||..+.. .+.+..++++.|+-++
T Consensus 407 ~~L~~Li~~IK~~~V~~IF~Epq~~~~---------~~~l~~IA~e~Gv~V~ 449 (479)
T TIGR03772 407 ADRRRLTRTIENLKVPAVFLEPNLAAR---------STTLNEIADELGVRVC 449 (479)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc---------hHHHHHHHHHcCCcEE
Confidence 444444443334589999999976531 3557788889888653
No 463
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=21.62 E-value=2.5e+02 Score=21.48 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=30.2
Q ss_pred HHHHHHHHccCCCceEEEEEcccCCCCcceeCCCChHHHHHHHHHHhCCEEEEccc
Q 011669 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV 296 (480)
Q Consensus 241 ~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv 296 (480)
++..+.|++ ++...||+-..- ++...+.+.++|+++++.++.-+.
T Consensus 17 ~~v~kai~~---gkaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 17 KQTVKALKR---GSVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHHc---CCeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEECC
Confidence 455566653 466666664321 345689999999999999985443
No 464
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=21.61 E-value=8.2e+02 Score=24.43 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhCCEEEEcc
Q 011669 276 YLPAVYKSIKKAGGLCIADE 295 (480)
Q Consensus 276 ~l~~l~~l~~~~gillI~DE 295 (480)
-+.+.++.++++|+.+|.|-
T Consensus 201 AV~~~a~~a~~~gvpiIADG 220 (346)
T PRK05096 201 AVIECADAAHGLGGQIVSDG 220 (346)
T ss_pred HHHHHHHHHHHcCCCEEecC
Confidence 35667777888999999995
No 465
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=21.56 E-value=2.8e+02 Score=22.63 Aligned_cols=46 Identities=9% Similarity=-0.008 Sum_probs=31.6
Q ss_pred HHHHHHHHccCCCceEEEEEcccC-CCCcceeCCCChHHHHHHHHHHhCCEEEE
Q 011669 241 KDVQDLIDFGTSGHVAGFLSESIQ-GVGGIIELAPGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 241 ~~le~~i~~~~~~~~a~vi~epi~-~~~G~~~~~~~~l~~l~~l~~~~gillI~ 293 (480)
.++.+.+. .+++..||.-|.+ +..+ ....-..|++.|.+|++.++.
T Consensus 60 ~~i~~~i~---~g~i~~VInt~~~~~~~~----~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIA---EGEIDAVIFFRDPLTAQP----HEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHH---cCceeEEEEcCCCCCCCc----ccccHHHHHHHHHHcCCCEEE
Confidence 34556665 4588888887754 4322 123367999999999999884
No 466
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=21.04 E-value=82 Score=20.81 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=16.4
Q ss_pred CCChHHHHHHHHHHhCCEEEE
Q 011669 273 APGYLPAVYKSIKKAGGLCIA 293 (480)
Q Consensus 273 ~~~~l~~l~~l~~~~gillI~ 293 (480)
+-.|++.+.++++++|+.=|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 346788888899999987764
No 467
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=20.95 E-value=1.6e+02 Score=22.24 Aligned_cols=40 Identities=23% Similarity=0.423 Sum_probs=27.6
Q ss_pred CCCEEEEeCCHHHHHHHHHHHHHhhcCCceEEEEcCCccccc
Q 011669 157 NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (480)
Q Consensus 157 ~~~~v~f~~sGseA~~~Alk~ar~~~~~~~ii~~~~~yhG~~ 198 (480)
+...|+++.+|..|..++-.+... |.+.+.+++|+|.++.
T Consensus 56 ~~~iv~~c~~g~~a~~~~~~l~~~--G~~~v~~l~GG~~~w~ 95 (100)
T smart00450 56 DKPVVVYCRSGNRSAKAAWLLREL--GFKNVYLLDGGYKEWS 95 (100)
T ss_pred CCeEEEEeCCCcHHHHHHHHHHHc--CCCceEEecCCHHHHH
Confidence 445778888888886665554333 6666888899887654
No 468
>PRK10785 maltodextrin glucosidase; Provisional
Probab=20.93 E-value=1.8e+02 Score=31.53 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=34.5
Q ss_pred ceEEEEEcccCCCCcceeC-------------CCChHHHHHHHHHHhCCEEEEcccccCcc
Q 011669 254 HVAGFLSESIQGVGGIIEL-------------APGYLPAVYKSIKKAGGLCIADEVQAGFA 301 (480)
Q Consensus 254 ~~a~vi~epi~~~~G~~~~-------------~~~~l~~l~~l~~~~gillI~DEv~tgfg 301 (480)
.+-+|.+.|+....+.--+ +.+-+++|.+.|+++|+-||.|=|....|
T Consensus 192 Gv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 192 GVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred CCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 6789999997654322111 11458999999999999999999965444
No 469
>cd04892 ACT_AK-like_2 ACT domains C-terminal to the catalytic domain of aspartokinase (AK; 4-L-aspartate-4-phosphotransferase). This CD includes the second of two ACT domains C-terminal to the catalytic domain of aspartokinase (AK; 4-L-aspartate-4-phosphotransferase). The exception in this group, is the inclusion of the first ACT domain of the bifunctional aspartokinase - homoserine dehydrogenase-like enzyme group (ACT_AKi-HSDH-ThrA-like_1) which includes the monofunctional, threonine-sensitive, aspartokinase found in Methanococcus jannaschii and other related archaeal species. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. AK is the first enzyme in the pathway of the biosynthesis of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. One mechanism for the regulation of this pathway is by the production of several isoenzymes of AK with different repressors an
Probab=20.91 E-value=2.6e+02 Score=18.91 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCceeeccCcCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 011669 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478 (480)
Q Consensus 429 ~~~~~~~l~~~Gv~v~~~~~~~~~iRi~p~~~~t~~~id~~l~~l~~~l~ 478 (480)
...+.+.|.+.++-+..-....+...++ +...+++.+.+++.|.+.+.
T Consensus 17 ~~~i~~~l~~~~i~v~~i~~~~~~~~i~--~~v~~~~~~~~~~~l~~~~~ 64 (65)
T cd04892 17 AARIFSALAEAGINIIMISQGSSEVNIS--FVVDEDDADKAVKALHEEFF 64 (65)
T ss_pred HHHHHHHHHHCCCcEEEEEcCCCceeEE--EEEeHHHHHHHHHHHHHHHh
Confidence 4568888888887775432211224555 67788999999999887653
No 470
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=20.77 E-value=1.4e+02 Score=26.09 Aligned_cols=55 Identities=7% Similarity=0.105 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHccCCCceEEEEEcccCCCCcceeC-------CCChHHHHHHHHHHhCCEEE
Q 011669 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIEL-------APGYLPAVYKSIKKAGGLCI 292 (480)
Q Consensus 237 ~~~~~~le~~i~~~~~~~~a~vi~epi~~~~G~~~~-------~~~~l~~l~~l~~~~gillI 292 (480)
..+.+.++++++.........+++.+..... .-.. -..+-+.++++|+++++.++
T Consensus 88 ~~~~~~~~~~i~~i~~~~~~vil~~~~~~~~-~~~~~~~~~~~~~~~n~~l~~~a~~~~v~~v 149 (185)
T cd01832 88 DTYRADLEEAVRRLRAAGARVVVFTIPDPAV-LEPFRRRVRARLAAYNAVIRAVAARYGAVHV 149 (185)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCCccc-cchhHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 3445666666665323345566666543201 0100 02345678899999997766
No 471
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=20.57 E-value=2.2e+02 Score=22.97 Aligned_cols=54 Identities=20% Similarity=0.231 Sum_probs=30.9
Q ss_pred HHHHHHHHHHh-CCCCCCEEEEeCCH-HHHHHHHHHHHHhhcCCceEEEEcCCccccc
Q 011669 143 IADFAEALASK-MPGNLKVVFFTNSG-TEANELAIMMARLYTGCNDIISLRNAYHGNA 198 (480)
Q Consensus 143 ~~~l~e~L~~~-~~~~~~~v~f~~sG-seA~~~Alk~ar~~~~~~~ii~~~~~yhG~~ 198 (480)
..++.+.+.+. .+.+...|++|.+| ..|-..+..+.. .|-+++..++|++.++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~--~G~~~v~~l~GG~~~W~ 119 (122)
T cd01448 64 PEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRY--FGHENVRVLDGGLQAWK 119 (122)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHH--cCCCCEEEecCCHHHHH
Confidence 44565655543 22334566777774 555554433322 26677888899887653
No 472
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=20.35 E-value=7.7e+02 Score=23.66 Aligned_cols=70 Identities=17% Similarity=0.109 Sum_probs=39.9
Q ss_pred ccEEEeCCCCEEEeccCCcccccCCCCCHHHHHHHHHHHHhcc---ccccccCChHHHHHHHHHHHhCCC--CCCEEEEe
Q 011669 90 MQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ---HSTVLYLNHAIADFAEALASKMPG--NLKVVFFT 164 (480)
Q Consensus 90 G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~---~~~~~~~~~~~~~l~e~L~~~~~~--~~~~v~f~ 164 (480)
-.++.|.||--|.+- ..-|...+++.+.-++.. ..+ ..+......++++|..+... ..++ +.
T Consensus 9 ~~~l~DlDGvl~~G~----------~~ipga~e~l~~L~~~g~~~iflT-Nn~~~s~~~~~~~L~~~~~~~~~~~~--i~ 75 (269)
T COG0647 9 DGFLFDLDGVLYRGN----------EAIPGAAEALKRLKAAGKPVIFLT-NNSTRSREVVAARLSSLGGVDVTPDD--IV 75 (269)
T ss_pred CEEEEcCcCceEeCC----------ccCchHHHHHHHHHHcCCeEEEEe-CCCCCCHHHHHHHHHhhcCCCCCHHH--ee
Confidence 347889999877431 234778888776444321 111 22345566789999995543 3343 44
Q ss_pred CCHHHHHH
Q 011669 165 NSGTEANE 172 (480)
Q Consensus 165 ~sGseA~~ 172 (480)
.||.-+.+
T Consensus 76 TS~~at~~ 83 (269)
T COG0647 76 TSGDATAD 83 (269)
T ss_pred cHHHHHHH
Confidence 55554443
No 473
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=20.22 E-value=6.7e+02 Score=23.29 Aligned_cols=22 Identities=14% Similarity=0.102 Sum_probs=16.8
Q ss_pred CEEEEeCCHHHHHHHHHHHHHh
Q 011669 159 KVVFFTNSGTEANELAIMMARL 180 (480)
Q Consensus 159 ~~v~f~~sGseA~~~Alk~ar~ 180 (480)
+.+...+||-+++.+..++...
T Consensus 2 k~~~l~SGGKDS~~al~~a~~~ 23 (223)
T TIGR00290 2 KVAALISGGKDSCLALYHALKE 23 (223)
T ss_pred cEEEEecCcHHHHHHHHHHHHh
Confidence 3466889999999988876544
Done!