RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 011669
(480 letters)
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 470 bits (1211), Expect = e-164
Identities = 175/433 (40%), Positives = 242/433 (55%), Gaps = 14/433 (3%)
Query: 56 DGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGH 115
GP A E++ +R+ L+ S + + PL +V + YL+D +G YLD GIA + GH
Sbjct: 14 PGPKALELIERREEALARS-YGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGH 72
Query: 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIA-DFAEALASKMPGN-LKVVFFTNSGTEANEL 173
HP VV+++ Q+ ++ H+ L + + AE L + PG+ LK VFF NSG EA E
Sbjct: 73 NHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEA 132
Query: 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK---FNVVQTGVHHALNPDPYRG 230
AI +AR YTG +I+ A+HG G + T F + GV+H P+PYR
Sbjct: 133 AIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRC 192
Query: 231 VFGADGEMYAKDVQDLI-----DFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSI 284
FG GE D + I D VA + E IQG GGII G+L A+ K
Sbjct: 193 PFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLC 252
Query: 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV 344
++ G L IADEVQ GF RTG + FE GV PDIVT+AK +G G+PL AVV EI +
Sbjct: 253 REHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMDW 311
Query: 345 LTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404
+ TFGGNPV AA AVL VI+++ L A +G YL++RL L++K+ +IGDV
Sbjct: 312 PPGG-HGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDV 370
Query: 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
RG G ++GVE V DR K P I+ + E G+L+ G +GNV RI PPL + E
Sbjct: 371 RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDE 430
Query: 465 DADYLVDVMDYSL 477
+ D +D+++ +L
Sbjct: 431 ELDEGLDILEEAL 443
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 462 bits (1190), Expect = e-153
Identities = 203/437 (46%), Positives = 256/437 (58%), Gaps = 22/437 (5%)
Query: 55 YDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCG 114
G EIL +RK L P+L YS P+ V G +L D GR YLD F + V G
Sbjct: 580 QSGRDKAEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNVCHV--G 637
Query: 115 HCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELA 174
H HP VV + Q R+ +T YL+ AI +AE L + +P L V FF NSG+EAN LA
Sbjct: 638 HAHPRVVAAAARQAARLNTNT-RYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLA 696
Query: 175 IMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG-------VHHALNPDP 227
+ +AR +TG D I L +AYHG T S +KFN + G V A PD
Sbjct: 697 LRLARAHTGQRDAIVLDHAYHGT---TTELIDLSPYKFN--RKGGKGRPDHVEVAEVPDS 751
Query: 228 YRGVFG----ADGEMYAKDVQDLID-FGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVY 281
YRG G +A+ V + I G A F++ESI V G I L GYL VY
Sbjct: 752 YRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVY 811
Query: 282 KSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEI 341
++ AGG+CIADEVQ GF R GSH+W FE GVVPDIVTM K IGNG P+GAVVTT EI
Sbjct: 812 AMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREI 871
Query: 342 AEVLTR-RNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI 400
A+ YFNTFGGNPV A G AVL +I+ + LQ NA +G+YL L L+D++ I
Sbjct: 872 ADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDI 931
Query: 401 IGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLC 460
IGDVRG G LG+E VTDR+ K PA A Y+ + +E G+L+G G + NV +I PPL
Sbjct: 932 IGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLI 991
Query: 461 FTKEDADYLVDVMDYSL 477
F++ DAD+L++V+D L
Sbjct: 992 FSRADADHLLEVLDDVL 1008
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 429 bits (1105), Expect = e-148
Identities = 164/411 (39%), Positives = 226/411 (54%), Gaps = 9/411 (2%)
Query: 67 RKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVN 126
RK Y PL +V + YL+D +G RYLD GI + GH HP VV+++
Sbjct: 6 RKVLWHGYTVRPY--PLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKE 63
Query: 127 QIKRIQHSTVLYLNHAIAD-FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN 185
Q+ ++ H ++ + + A AE L + P L VFF NSGTEA E A+ +AR YTG
Sbjct: 64 QLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRK 123
Query: 186 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245
IIS AYHG G + T ++ P PYR A+ + +++
Sbjct: 124 KIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEE 183
Query: 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305
++ VA + E IQG GG+I PGYL A+ + +K G L IADEVQ GF RTG
Sbjct: 184 ALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK 242
Query: 306 HFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR--NYFNTFGGNPVCTAA 363
F FE GV PDIVT+ KG+G G+PLGAV+ EI + + TFGGNP+ AA
Sbjct: 243 MFA-FEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAA 301
Query: 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT 423
AVL+V++++ L NA +G YL+ERL L +K+ ++GDVRGRG ++G+E V DR K
Sbjct: 302 ALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKP 361
Query: 424 PAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
P K I+ E G+L+ G GNV R+ PPL T+E+ D +D +D
Sbjct: 362 PDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEIDEGLDALD 410
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 395 bits (1017), Expect = e-128
Identities = 190/448 (42%), Positives = 256/448 (57%), Gaps = 32/448 (7%)
Query: 48 FDYSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGG 107
PP P A +LA+R + H Y+ P + G +LFD GR YLD
Sbjct: 537 LPCDAPP---PDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNN 593
Query: 108 IATVCCGHCHPYVVDSIVNQIKRIQ-HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNS 166
+ + GH HP + + Q + +S Y A+A+F+E LA+ P L VF NS
Sbjct: 594 VTVL--GHGHPRLAAAAARQWSLLNTNSRFHY--AAVAEFSERLAALAPDGLDTVFLVNS 649
Query: 167 GTEANELAIMMARLYTGCNDIISLRNAYHG-----NAAGTMGA------TAQSNWKFNVV 215
G+EAN+LAI +A +G D++S+ AYHG +A T A + +W
Sbjct: 650 GSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDW----- 704
Query: 216 QTGVHHALNPDPYRGVF-GAD-GEMYAKDV-QDLIDFGTSGH-VAGFLSESIQGVGGIIE 271
VH +P+ YRG F GAD Y +DV L + SG +AGF+ E + G G I
Sbjct: 705 ---VHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIA 761
Query: 272 LAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIP 331
L PGYL VY +++ GG+CIADEVQ G+ R G +FWGFE GVVPDI+TMAKG+GNG P
Sbjct: 762 LPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHP 821
Query: 332 LGAVVTTPEIAEVLTRRNY-FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKER 390
LGAV+T EIAE L Y F++ GG+PV G AVL V++++KLQ NA VG +LK R
Sbjct: 822 LGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKAR 881
Query: 391 LTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG 450
L AL D++ +IG V G G LGVE V DRQ PA ET I D++ E+GV++ G +
Sbjct: 882 LEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHL 941
Query: 451 NVFRITPPLCFTKEDADYLVDVMDYSLS 478
N+ +I PPLC +E AD+ VD++D L+
Sbjct: 942 NILKIKPPLCLDRESADFFVDMLDRVLT 969
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 354 bits (911), Expect = e-119
Identities = 150/412 (36%), Positives = 223/412 (54%), Gaps = 35/412 (8%)
Query: 75 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH 133
L Y + P+ +V G+ Y++D+ GR YLD GIA GHCHP +V+++ Q +++ H
Sbjct: 17 LMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH 76
Query: 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC---NDIISL 190
+ L+ N A+ AE L P VFF NSG EANE A+ +AR YTG + II+
Sbjct: 77 VSNLFYNEPQAELAEKLVELSPF-ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAF 135
Query: 191 RNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID 248
N++HG G + AT Q ++ F + G H P+ D E ++ ID
Sbjct: 136 ENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHV----PF-----NDIE----ALEAAID 182
Query: 249 FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308
A + E IQG GG+I P +L A+ + + G L I DEVQ G RTG +
Sbjct: 183 ----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG-KLF 237
Query: 309 GFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVL 368
+E +GV PDI+T+AK +G G P+GA++ T EIA T ++ +TFGGNP+ A AVL
Sbjct: 238 AYEHYGVEPDILTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVL 297
Query: 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAE 428
+V+ ++ L N G YL +RL LK +Y ++ +VRGRG ++G+E + +
Sbjct: 298 EVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRAR------ 351
Query: 429 TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
I+ ++E GVLV G NV R PPL T+E+ D +D ++ +L+
Sbjct: 352 --DIVRALREEGVLVLPAG--PNVIRFLPPLVITEEEIDEALDALERALAAA 399
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 342 bits (879), Expect = e-114
Identities = 147/417 (35%), Positives = 221/417 (52%), Gaps = 40/417 (9%)
Query: 72 SPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130
L + Y + P+ V G+ L+D++G+ YLD GIA GHCHP +V++I Q +
Sbjct: 11 KKYLMNTYGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAK 70
Query: 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND---- 186
+ H++ LY + AE L + VFF NSG EANE AI +AR Y
Sbjct: 71 LIHTSNLYYIEPQEELAEKLVEL--SGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKP 128
Query: 187 -IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK--DV 243
II+ N++HG T+ AT Q Q G +P +G +Y D+
Sbjct: 129 EIITAENSFHGRTLATLSATGQPK-----YQEGF------EPL-----VEGFIYVPFNDI 172
Query: 244 QDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFART 303
+ L + A + E IQG GG+ YL A+ + + G L I DEVQ G RT
Sbjct: 173 EALKA-AITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRT 231
Query: 304 GSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363
G + ++ +G+ PDI+T+AKG+G G+P+GAV+ ++A+V T ++ +TFGGNP+ AA
Sbjct: 232 GK-LFAYQHYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAA 290
Query: 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT 423
AV+++I+++ L NA VG YL+ +L L +KY I +VRG G ++G+E L
Sbjct: 291 ALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIE------LDR 344
Query: 424 PAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
PA I+ K E G+L+ G NV R+ PPL +KE+ D VD ++ L ++
Sbjct: 345 PAA----EIVKKALEKGLLINVTG--DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 317 bits (814), Expect = e-104
Identities = 167/455 (36%), Positives = 235/455 (51%), Gaps = 32/455 (7%)
Query: 41 FLPRMPPFDYSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRR 100
+PR P P GP A EI+ + + +L+ S Y PL + G+ ++ D +G
Sbjct: 1 DMPRRPRIVVELP---GPKAREIIERDEKYLAQSTRRWY--PLVIERGEGVWVEDVDGNV 55
Query: 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHAIADFAEALASKMPGNL- 158
YLD GIA GH HP VV ++ Q ++ H S + + AE L PG
Sbjct: 56 YLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFE 115
Query: 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK----FNV 214
K VFFTNSGTE+NE AI +AR +TG II+ A+HG G++ TA S F
Sbjct: 116 KKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTA-SKPVQRKGFFP 174
Query: 215 VQTGVHHALNPDPYRGVFGA-DGEMYAKDVQDLIDFGTSGH------VAGFLSESIQGVG 267
+ GV H P+PYR +G + E V D I+ VA + E IQG G
Sbjct: 175 LMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEG 234
Query: 268 GIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIG 327
G + + + K K G L I DEVQ G RTG + E GV PDI+T+AK I
Sbjct: 235 GYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK-MFAIEHFGVEPDIITLAKAIA 293
Query: 328 NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387
G+PLGAV+ E+ L ++ NTFGGNPV AA A L+ + ++ L NA +G YL
Sbjct: 294 GGLPLGAVIGRAELMF-LPPGSHANTFGGNPVAAAAALATLEEL-EEGLLENAQKLGEYL 351
Query: 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLV---G 444
++ L LK+KY IGDVRG G ++GVE V DR K P ++ + + G+L+ G
Sbjct: 352 RKELKELKEKYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFKRGLLLLGAG 409
Query: 445 KGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
K + RI PPL T+E+AD +++++ ++ +
Sbjct: 410 K-----SAIRIIPPLIITEEEADIGLEILEEAIKE 439
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 311 bits (800), Expect = e-102
Identities = 143/429 (33%), Positives = 213/429 (49%), Gaps = 34/429 (7%)
Query: 75 LFHLYS-------KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQ 127
L+H ++ +P +V + YL D +GRRYLD G+ V GH P + ++I Q
Sbjct: 13 LWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQ 72
Query: 128 IKRIQHSTVLYL-NHAIADFAEALASKMP-GNLKVVFFTNSGTEANELAIMMARLY---- 181
+ ++ H + + AE LA P G L VFFT+SG+EA E A+ MA Y
Sbjct: 73 LDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRAR 132
Query: 182 --TGCNDIISLRNAYHGNAAGTMGATAQSNWK---FNVVQTGVHHALNPDPYRGVFGADG 236
IS RN YHG+ G M + ++ + V H P YR F +G
Sbjct: 133 GQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEG 192
Query: 237 EM----YAKDVQDLIDFGTSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLC 291
+ A +++ LI +A F+ E + G GG++ PGYL V + K G L
Sbjct: 193 DEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILL 252
Query: 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNY 350
IADEV GF RTG F E G+VPDI+ +AKG+ G +PL AV+T+ I E + +
Sbjct: 253 IADEVATGFGRTGKMF-ACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA 311
Query: 351 -----FNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405
+T+ GNP+ AA A L +++++ L +G+YL+ L A + ++GDVR
Sbjct: 312 GAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVR 371
Query: 406 GRGFLLGVEFVTDRQLKTPAKAETLY-IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
G G + +E V D+ KTP +A + E G+L+ G+V + PPL T+E
Sbjct: 372 GLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---GDVIYLMPPLIITRE 428
Query: 465 DADYLVDVM 473
+ D LVD +
Sbjct: 429 EIDELVDAL 437
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 310 bits (796), Expect = e-101
Identities = 158/429 (36%), Positives = 227/429 (52%), Gaps = 15/429 (3%)
Query: 62 EILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVV 121
+++ + L+P+L L VV G+ Y + +G+ YLD GIA GH HP VV
Sbjct: 7 DLVERYPQLLAPAL-AKDHPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVV 65
Query: 122 DSIVNQIKRIQH-STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARL 180
+I Q ++ H + + +I AE LA PG L FF+NSG EA E A+ +A+
Sbjct: 66 QAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKH 125
Query: 181 YTGCNDIISLRNAYHGNAAGTMGATAQSNWKF----NVVQTGVHHALNPDPYRGVFGADG 236
T IIS +HG G + T S K+ + V+ A P R G D
Sbjct: 126 VTKRPYIISFTGCFHGRTLGALSVTT-SKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDP 184
Query: 237 EMYA----KDVQDLIDFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291
E+ +D++ L + VA + E + G GG I +L + + + G L
Sbjct: 185 EVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILL 244
Query: 292 IADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF 351
I DEVQ GF RTG F + GVVPDI+T+AKGI +G+PL AVV + E+ E ++
Sbjct: 245 IFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQWPLGSHG 303
Query: 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411
TFGGNPV AA A L+VI+++KL +NA+ +G+Y ERL LK+K+ +IGDVRG G ++
Sbjct: 304 TTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMI 363
Query: 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
G+E V P I+DK E G+L G GNV R+ PPL TKE+ D +D
Sbjct: 364 GIEIV--DPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLD 421
Query: 472 VMDYSLSKM 480
++D +L++
Sbjct: 422 ILDEALTEY 430
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 287 bits (736), Expect = 1e-93
Identities = 135/342 (39%), Positives = 183/342 (53%), Gaps = 14/342 (4%)
Query: 84 NVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH-STVLYLNHA 142
+ K +L+D +GRRYLD GIA V GHCHP +V ++ Q ++ H S +
Sbjct: 1 FITKAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTEP 60
Query: 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHG 196
AE LA PG L VFF NSG+EANE AI +AR Y TG II+ +HG
Sbjct: 61 ALQLAEKLAQLTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHG 120
Query: 197 NAAGTMGATAQSNWKFNVVQT--GVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254
G + T S +K + GV+ PD A LI +
Sbjct: 121 RTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEA---LRLIKAVHDDN 177
Query: 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG 314
+A + E IQG GG++ PG+L + + KK G L IADEVQ GF RTG + E +G
Sbjct: 178 IAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGK-LFACEHYG 236
Query: 315 VVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374
V PDI+T+AK + G+PL AV+ T EI + ++ TFGGNP+ AA AVL +I+ +
Sbjct: 237 VTPDIMTLAKALTGGLPLSAVLATAEIMQAFHPGSHGGTFGGNPLACAAALAVLDIIEDE 296
Query: 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416
L NA G YL++ L AL+DK +IGDVRG+G ++ +E V
Sbjct: 297 NLLQNAQEKGDYLRKGLLALQDK-PVIGDVRGKGLMIAIEIV 337
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 281 bits (722), Expect = 4e-91
Identities = 146/404 (36%), Positives = 210/404 (51%), Gaps = 40/404 (9%)
Query: 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137
P+ +V GK Y++D NG+ YLD GIA GH HP +V+++ Q++++ H + L
Sbjct: 6 YGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNL 65
Query: 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND-----IISLRN 192
Y + AE L VFF NSG EANE A+ +AR YTG II+ N
Sbjct: 66 YYTEPQEELAEKLVEHS--GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFEN 123
Query: 193 AYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250
++HG G + AT Q ++ F + G +A PY + + ++ ID
Sbjct: 124 SFHGRTMGALSATGQPKYQKGFEPLVPGFSYA----PYNDI---------ESLKKAID-- 168
Query: 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310
A + E IQG GG+ + +L A+ + K L I DEVQ G RTG F+ +
Sbjct: 169 --DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFAY 225
Query: 311 EAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370
E +G+ PDI+T+AKG+G G+P+GA + E+AE T ++ +TFGGNP+ AA AVL+V
Sbjct: 226 EHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEV 285
Query: 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETL 430
I+K++L N G Y KERL L Y +VRG+G +LG+E +A
Sbjct: 286 IEKERLLENVKEKGDYFKERLEELGKNY-PNKEVRGKGLMLGIEL----------EAPCK 334
Query: 431 YIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
I+ K E G+LV G V R PPL TKE+ D V ++
Sbjct: 335 DIVKKALEKGLLVNCAG--PKVLRFLPPLIITKEEIDEAVSALE 376
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 265 bits (679), Expect = 7e-84
Identities = 144/432 (33%), Positives = 214/432 (49%), Gaps = 18/432 (4%)
Query: 58 PSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCH 117
EI+ + +SP+ + PL V + ++D G Y+D A GH +
Sbjct: 1 MKPLEIIERYSKVISPAN-RVTYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNN 59
Query: 118 PYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176
P VV +I Q ++ H T +Y AE L PG+ V F SG++AN+ AI
Sbjct: 60 PRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIK 119
Query: 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQ-----TGVHHALNPDPYRGV 231
AR YT I+S +Y+G+ G M T F V + VH+ PD YR
Sbjct: 120 FARAYTKRRKILSYLRSYYGSTYGAMSLTGLD---FPVRALVGELSDVHYIPYPDCYRCP 176
Query: 232 FGADGEMYAKDVQDLID--FGTSGH---VAGFLSESIQGVGGIIELAPGYLPAVYKSIKK 286
FG + + + I F + VA +E IQG G+I Y + K + +
Sbjct: 177 FGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDE 236
Query: 287 AGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLT 346
G L + DEVQ+G RTG F E GV PDI+T+ K +G G+P+ A + EI + L
Sbjct: 237 HGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLP 295
Query: 347 RRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG 406
+ T GNPV +AA AV++ I++ L A +G+Y K+RL +K K+ +IGDVRG
Sbjct: 296 PLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRG 355
Query: 407 RGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDA 466
G ++GV+ V DR+ K A E ++ + E+G++V F GNV RI PPL KE
Sbjct: 356 IGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTF--FSGNVLRIQPPLTIEKEVL 413
Query: 467 DYLVDVMDYSLS 478
D +D+++ ++
Sbjct: 414 DEGLDILEEAIE 425
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 257 bits (659), Expect = 2e-81
Identities = 140/397 (35%), Positives = 191/397 (48%), Gaps = 43/397 (10%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
PL +V G+ ++D +G+ YLD GGIA GH HP VV+++ Q+ + H + L+
Sbjct: 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE 85
Query: 142 AIADFAEALASKM--PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAA 199
AE L + P + VFF NSG EANE A +ARL TG I++ +HG
Sbjct: 86 PQIALAERLVELLGAPEGGR-VFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGR-- 141
Query: 200 GTMGA---TAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254
TMGA T Q + F + GV H PY D + A V D
Sbjct: 142 -TMGALALTGQPAKRAPFEPLPGGVEHV----PY-----GDVDALAAAVDD--------D 183
Query: 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG 314
A E IQG G++ GYL A + + G L + DEVQ G RTG ++ + G
Sbjct: 184 TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG-AWFAHQHDG 242
Query: 315 VVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374
V PD+VT+AKG+G G+P+GA + A++LT + +TFGGNPV AA AVL I +
Sbjct: 243 VTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASE 302
Query: 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMD 434
L NA +G L+ + AL ++ VRGRG LLG+ L P +
Sbjct: 303 GLLENAERLGEQLRAGIEALGHP--LVDHVRGRGLLLGIV------LTAPVAKA---VEA 351
Query: 435 KMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
+E G LV +V R+ PPL T D V
Sbjct: 352 AAREAGFLVNAVA--PDVIRLAPPLIITDAQVDAFVA 386
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 259 bits (663), Expect = 2e-81
Identities = 138/424 (32%), Positives = 218/424 (51%), Gaps = 30/424 (7%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
+ V + ++ D G RYLD G+ V G+ + ++ Q+K + + L +H
Sbjct: 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-FPLTQSH 88
Query: 142 --AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN------DIISLRNA 193
AI AE L ++ G V+FF+NSG+EANE A +AR Y IS A
Sbjct: 89 EPAIK-LAEKL-NEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRA 146
Query: 194 YHGNAAGTMGATAQSN--WKFNVVQTGVHHALNPDPYRGVFGADGEMY----AKDVQDLI 247
YHGN+ G + AT Q+ +K+ + G H PD YR ++Y K++ ++
Sbjct: 147 YHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVM 206
Query: 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307
+ S +A + E I GG++ Y+ AV + +K G L I+DEV GF RTG F
Sbjct: 207 TWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF 266
Query: 308 WGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN---YF---NTFGGNPVC 360
GF +GV PDI+TMAKGI + +PL A EI E + +F NTFGGNP
Sbjct: 267 -GFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAA 325
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
A L++++ + L + +G L E+L ++ ++GD+RG+G L+G+E V D++
Sbjct: 326 CALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKE 385
Query: 421 LKTPAKAETL-YIMDKMKEMGVLVGKGGF----YGNVFRITPPLCFTKEDADYLVDVMDY 475
K PA + + ++ KE G+++GK G Y NV ++PPL + E+ ++V +
Sbjct: 386 TKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKT 445
Query: 476 SLSK 479
+L +
Sbjct: 446 ALER 449
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 256 bits (657), Expect = 3e-81
Identities = 142/408 (34%), Positives = 203/408 (49%), Gaps = 46/408 (11%)
Query: 72 SPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130
L +Y++ L G+ +L DE+G RYLD GIA GH HP++V+++ Q ++
Sbjct: 3 ISPLLPVYNRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEK 62
Query: 131 IQHSTVLYLNHAIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLY-TGC--- 184
+ H + LY I + E LA ++ N VFFTNSG EA E AI AR Y G
Sbjct: 63 LWHVSNLY---RIPE-QERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHP 118
Query: 185 --NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNP--DPYRGVFGADGEMYA 240
II+ A+HG T+ A Q K+ P + V D E
Sbjct: 119 ERYRIITFEGAFHGRTLATIAAGGQE--KY-------LEGFGPLVPGFDQVPFGDIEA-- 167
Query: 241 KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300
++ I T A L E IQG GGI +L + + + G L I DEVQ G
Sbjct: 168 --LKAAITPNT----AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGM 221
Query: 301 ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVC 360
RTG + E GV PDI+ +AKGIG G PLGA + T E A+ +T + +T+GGNP+
Sbjct: 222 GRTGK-LFAHEWAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLA 280
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVTDR 419
A G+AVL VI +N +G YLK++L L D++ +I +VRG+G LLG+
Sbjct: 281 MAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGL------ 334
Query: 420 QLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
+ P + ++ +++ G+L G NV R+ PPL T+E+ D
Sbjct: 335 KCVVPNRD----LVQALRDEGLLTVGAG--DNVVRLLPPLIITEEEID 376
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 253 bits (648), Expect = 4e-80
Identities = 143/402 (35%), Positives = 207/402 (51%), Gaps = 37/402 (9%)
Query: 74 SLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVC-CGHCHPYVVDSIVNQIKRI 131
LF Y + P+++V GK + D NG+ YLD GIA VC GHCHP V ++ Q+ I
Sbjct: 3 HLFPTYGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIA-VCNLGHCHPTVTKAVQEQLDDI 61
Query: 132 QHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLR 191
H + L+ N + A LA G+L VFF NSG EANE A+ +AR +TG + I++
Sbjct: 62 WHVSNLFTNSLQEEVASLLAENSAGDL--VFFCNSGAEANEAALKLARKHTGKSKIVTFE 119
Query: 192 NAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF 249
++HG GTM AT Q K F + G H P+ + M
Sbjct: 120 QSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHV----PFNDIKALKEVM----------- 164
Query: 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309
+ VA + E +QG GG+I P +L V KK G L I DEVQ G RTG+ F
Sbjct: 165 --NEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-A 221
Query: 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369
+E G+ PDIVT+AKG+GNGIP+GA++ E+ ++ +TFGGNP+ AA VL+
Sbjct: 222 YEQFGLDPDIVTVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQ 281
Query: 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAET 429
VI++ G Y ++L + + ++RG+G ++G+E
Sbjct: 282 VIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIE------CTEEVAP-- 333
Query: 430 LYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
++++++E G+LV G NV R+ PPL TKE+ D V
Sbjct: 334 --VIEQLREEGLLVLSAG--PNVIRLLPPLVVTKEELDQAVY 371
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 253 bits (648), Expect = 3e-79
Identities = 136/422 (32%), Positives = 205/422 (48%), Gaps = 21/422 (4%)
Query: 76 FHLYS-----KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR 130
FH +S P+ + + Y++D GRRYLD + GH HP VV +I Q R
Sbjct: 25 FHSWSAQGKINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAAR 84
Query: 131 IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISL 190
+ + N A ++ A +A + PG+L VFFTN G +ANE A+ MARL+TG ++S
Sbjct: 85 LCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSA 144
Query: 191 RNAYHGNAAGTMGATAQSNWKFNVVQT-GVHHALNPDPYRGVFGA-----DGEMYAKDVQ 244
+YHG + T N GV H P YR F A + E ++
Sbjct: 145 YRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLE 204
Query: 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304
+I+ +A L ES+ G GI+ PGYL V + + G + IADEV AGF RTG
Sbjct: 205 RVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG 264
Query: 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFN--TFGGNPVCT 361
F E GVVPD++T AKG+ +G +PLG V + IA R Y T+ G+P+
Sbjct: 265 KWF-AIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLAC 323
Query: 362 AAGHAVLKVIQKDKLQNNAHVVGS-YLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
AA A + ++++ + NA +G+ L L L +++ +G+VRG G +E V DR+
Sbjct: 324 AAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRE 383
Query: 421 LKTPAKAETLYIMDKMKEMGVLVGKGGFY----GNVFRITPPLCFTKEDADYLVDVMDYS 476
+ P A M + + G GN + PP T+++ + ++D +
Sbjct: 384 TREPL-APYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAA 442
Query: 477 LS 478
L+
Sbjct: 443 LA 444
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 247 bits (633), Expect = 8e-77
Identities = 134/445 (30%), Positives = 219/445 (49%), Gaps = 38/445 (8%)
Query: 65 AKRKTFLSPSLFHLYSK-----PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPY 119
A ++ L P +H +S L +V+ + Y+ D +GRRYLD GG+ V G+
Sbjct: 14 ADKRHLLHP--WHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREE 71
Query: 120 VVDSIVNQIKRIQHSTVLY--LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177
+ D+I +Q +R+ + T N A+ A LA PG+L VF T G+ A + A+
Sbjct: 72 MADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRF 131
Query: 178 ARLYTGC------NDIISLRNAYHGNAAGTM--GATAQSNWKFNVVQTGVHHALNPDPYR 229
Y II+ +AYHG+ T A +F+ VHH +P+PYR
Sbjct: 132 VHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYR 191
Query: 230 GVFGADGEMY----AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIK 285
G + + +D I + ++A F++E I G GG+I PGY + + +
Sbjct: 192 RPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251
Query: 286 KAGGLCIADEVQAGFARTGSHFWGFEAH-GVVPDIVTMAKGIGNG-IPLGAVVTTPEIAE 343
+ L I+DEV GF R G HF+ EA G+ PDI+T AKG+ +G PLGAV+ + + +
Sbjct: 252 RYDILYISDEVVTGFGRLG-HFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLD 310
Query: 344 VLTRRN----YFN---TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKD 396
V++ N F T+ G+PV AA +++++++ L + VG Y +ERL +L++
Sbjct: 311 VISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRE 370
Query: 397 KYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAE---TLYIMDKMKEMGVLVGKGGFYGNVF 453
++GDVRG + VE V D+ K + I +E G+LV ++
Sbjct: 371 -LPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP---LEHLC 426
Query: 454 RITPPLCFTKEDADYLVDVMDYSLS 478
++PPL T+ D +V ++ ++
Sbjct: 427 VLSPPLIITRAQIDEIVAILRAAIE 451
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 247 bits (632), Expect = 8e-77
Identities = 139/429 (32%), Positives = 214/429 (49%), Gaps = 37/429 (8%)
Query: 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ-HSTVLYL 139
P+ +V G Y++D +G++ LD GG+ V GH V ++IV Q+ ++ +ST
Sbjct: 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGT 83
Query: 140 NHAIADFAEALASKM-----PGNLKVVFFTNSGTEANELAIMMARLY---TGCND---II 188
H A L+ ++ P ++ VFF++ G+++ E A+ +AR Y G + I
Sbjct: 84 TH---PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFI 140
Query: 189 SLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFGAD-----GEMYAK 241
SL+ YHG G + ++ N + G H P YR F + A+
Sbjct: 141 SLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICAR 200
Query: 242 DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
++ I F +A F++E +QG GG+I + P V + + G L IADEV GF
Sbjct: 201 LLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFG 260
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYF-------NT 353
RTGS F G GV PDI+ +AKGI +G +PLGA + IA+ F T
Sbjct: 261 RTGSWF-GSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYT 319
Query: 354 FGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGV 413
+ G+PV AA A L ++ ++ L NA G+YL E L LK+++ ++GDVRG+G +L +
Sbjct: 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLAL 379
Query: 414 EFVTDRQLKTPAKAETLY---IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470
+ V D+ + P Y + D +E GVLV G ++PPL +ED D +V
Sbjct: 380 DLVADKATREPIDPSKGYANAVADVARENGVLVRPS---GTKIILSPPLVIQREDVDRIV 436
Query: 471 DVMDYSLSK 479
D +D LS
Sbjct: 437 DALDAGLSA 445
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 246 bits (629), Expect = 2e-76
Identities = 132/407 (32%), Positives = 202/407 (49%), Gaps = 14/407 (3%)
Query: 85 VVD-GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHA- 142
V+D G L D +G+ Y+D ++ GH P VV++I Q + H T Y+ H
Sbjct: 27 VIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEP 86
Query: 143 IADFAEALASKMPGNL-KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201
+ A+ L PG+ K V F SG++AN+ I AR YTG IIS NAYHG+ G+
Sbjct: 87 LVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGS 146
Query: 202 MGATAQS---NWKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSG 253
+ + S K+ + G H PD YRG++ E A + + +
Sbjct: 147 LSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPAD 206
Query: 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH 313
VA + E+IQG GG++E PGY A+YK ++ G L D++Q G RTG +
Sbjct: 207 EVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGK-WSSISHF 265
Query: 314 GVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373
+ PD+++ K + G+P+ A+V EI E L + T G NPV AA A + +I+
Sbjct: 266 NITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED 325
Query: 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIM 433
+ L + G Y ++R KY +GDVRG G +G++ V+D++LKT L I
Sbjct: 326 ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKIC 385
Query: 434 DKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
+ E GV++ GNV R PPL T E D ++ ++ + + +
Sbjct: 386 NYCFEHGVVI--IAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTAL 430
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 238 bits (610), Expect = 1e-73
Identities = 146/415 (35%), Positives = 207/415 (49%), Gaps = 20/415 (4%)
Query: 57 GPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC 116
GP + + +R ++ + + P+ V + D +G R +D GIA G+
Sbjct: 16 GPKSQALAERRAAAVAAGVGS--TLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNS 73
Query: 117 HPYVVDSIVNQIKRIQHSTVL---YLNHAIADFAEALASKMPGN--LKVVFFTNSGTEAN 171
P VV+++ Q+ R H+ + Y AE L PG+ + F NSG EA
Sbjct: 74 APRVVEAVREQVARFTHTCFMVTPY--EGYVAVAEQLNRLTPGDHEKRSALF-NSGAEAV 130
Query: 172 ELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN-WK--FNVVQTGVHHALNPDPY 228
E A+ +AR YTG ++ +AYHG TM TA+S +K F V+ A PY
Sbjct: 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPY 190
Query: 229 RGVFGA--DGEMYAKDVQDLID--FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284
R G DGE A +I+ G ++A + E IQG GG I A G+LPA+ +
Sbjct: 191 RDPKGLATDGEEAAARAITVIEKQVGA-DNLAAVIIEPIQGEGGFIVPAEGFLPALLEWC 249
Query: 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV 344
++ G + IADEVQ GFARTG+ F E G+VPD++T AKGI G+PL AV EI +
Sbjct: 250 RENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDA 308
Query: 345 LTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404
T+GGNPV AA A ++ I++D L A + + + +RL AL + IGDV
Sbjct: 309 PHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDV 368
Query: 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPL 459
RGRG ++ +E V P T + GV+V G YGNV R+ PPL
Sbjct: 369 RGRGAMIAIELVKPGT-TEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPL 422
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 236 bits (605), Expect = 9e-73
Identities = 134/405 (33%), Positives = 193/405 (47%), Gaps = 33/405 (8%)
Query: 87 DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR-IQHSTVLYLNHAIAD 145
G + L D G+ ++D GG GH +P VV ++ NQ+ + HS L L+ A
Sbjct: 70 AGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAM 128
Query: 146 FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---GCNDIISLRNAYHGNAAGTM 202
A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G +
Sbjct: 129 LAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGAL 188
Query: 203 GATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLS 260
ATA+S ++ F + G H P+ + E + + G VA +
Sbjct: 189 SATAKSTFRKPFMPLLPGFRHV----PF-----GNIEAMRTALSECKKTGDD--VAAVIL 237
Query: 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV 320
E IQG GG+I GYL AV K + G L I DEVQ G RTG + E V PDI+
Sbjct: 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHENVQPDIL 296
Query: 321 TMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFN--TFGGNPVCTAAGHAVLKVIQKDKLQ 377
+AK +G G+ P+GA + T E+ VL + + TFGGNP+ AA A + V+ + L
Sbjct: 297 CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLP 356
Query: 378 NNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK- 435
A G YL + L +Y ++ + RG+G L+ +EFV + E Y
Sbjct: 357 AQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN---------EIGYNFASE 407
Query: 436 MKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
M VLV RI PPL T E + ++ +L+ M
Sbjct: 408 MFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAM 452
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 232 bits (594), Expect = 1e-71
Identities = 135/398 (33%), Positives = 200/398 (50%), Gaps = 25/398 (6%)
Query: 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS---TVLYLNHAIADFAEA 149
++D+ GRRY+D GIA V GH HP V+ ++ Q+ R H+ V Y N+ AE
Sbjct: 34 IWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVR--LAER 91
Query: 150 LASKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 207
L + +PG+ K +F T +G EA E A+ +AR TG + +I+ +HG M T +
Sbjct: 92 LNALVPGDFAKKTIFVT-TGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGK 150
Query: 208 -SNWK--FNVVQTGVHHALNPDPYRGV-----FGADGEMYAKDVQDLIDFGTSGHVAGFL 259
+K F + V+H P GV A +++ DV VA +
Sbjct: 151 VVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD-------PQRVAAII 203
Query: 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI 319
E +QG GG ++ A+ + + G L IADEVQ GFARTG F E H V D+
Sbjct: 204 IEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEVAADL 262
Query: 320 VTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379
TMAKG+ G PL AV EI + T+GGNP+ AA HAVL VI+++ L
Sbjct: 263 TTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCER 322
Query: 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM 439
A+ +G+ LK+RL +L++ I D+RG GF+ VEF D P+ + K E
Sbjct: 323 ANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEF-NDADSGLPSAEFANRVRLKALEK 381
Query: 440 GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477
G+++ G +GNV R P+ + +D+++ S+
Sbjct: 382 GLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASI 419
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 230 bits (589), Expect = 6e-71
Identities = 134/407 (32%), Positives = 191/407 (46%), Gaps = 13/407 (3%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P+ + L D +G R +D GIA + GH HP VVD++ Q+ H+ + +
Sbjct: 16 PVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPY 75
Query: 142 -AIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
AE L PG+ K VFF NSG EA E A+ +AR YTG +++ + +HG
Sbjct: 76 EGYVALAEKLNRIAPGSGPKKSVFF-NSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRT 134
Query: 199 AGTMGATAQS---NWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG-- 253
TM TA+ F V+ A P PYR ++
Sbjct: 135 NMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVG 194
Query: 254 --HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311
+VA + E +QG GG I A G++PA+ ++ G + IADEVQ GFARTG+ F E
Sbjct: 195 ANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF-ACE 253
Query: 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371
G PD++T AK + +G+PL V EI + T+ GNP+ AA AVL +I
Sbjct: 254 HEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAII 313
Query: 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLY 431
+ + L A +G + +RLT LK IGDVRG G ++ VE V D P
Sbjct: 314 ESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV-DPGTTEPDAGLAER 372
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
I G+L+ G +GN+ R PPL E +D++ L+
Sbjct: 373 IATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 227 bits (579), Expect = 5e-69
Identities = 139/420 (33%), Positives = 208/420 (49%), Gaps = 17/420 (4%)
Query: 57 GPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC 116
GP A +L +R+ + + P + D +G +Y+D G I T+ GH
Sbjct: 14 GPKAASLLERRQNIVPKGV--SNGIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHS 71
Query: 117 HPYVVDSIVNQIKRIQH---STVLYLNHAIADFAEALASKMPGNL-KVVFFTNSGTEANE 172
HP V +++ Q+ + H + ++Y + AE LA+ PG+ K V F NSG EA E
Sbjct: 72 HPKVKEALHKQVDQYIHTGFNVMMY--EPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE 129
Query: 173 LAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN---WKFNVVQTGVHHALNPDPYR 229
A+ +AR YT IIS +HG TM T++ + F V+ A P YR
Sbjct: 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYR 189
Query: 230 GVFGADGEMYAKDV-QDLIDFGTSG----HVAGFLSESIQGVGGIIELAPGYLPAVYKSI 284
G E Y + ++ +F S +A + E +QG GG I + ++ V
Sbjct: 190 RPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNIC 249
Query: 285 KKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV 344
+ G L +ADE+Q GFARTG +F E VVPD++T++K +G G+P+ V+ EI +
Sbjct: 250 SEHGILFVADEIQTGFARTGKYF-AIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDE 308
Query: 345 LTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404
T+ G+P+ AA AVL +I+K+ L + A +G + R +K+KY IGDV
Sbjct: 309 SAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDV 368
Query: 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
RG G + E V DR+ K P K T I + + G+L+ G YGNV R+ PL T E
Sbjct: 369 RGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDE 428
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 223 bits (572), Expect = 3e-68
Identities = 127/411 (30%), Positives = 191/411 (46%), Gaps = 29/411 (7%)
Query: 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLN 140
PL + + YL+DE+GR Y+D GH HP + +I Q+ +++H L
Sbjct: 13 PPLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLDKLEHVMFGGLT 72
Query: 141 HAIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNA 193
H A + AE L P L+ VFF++SG+ A E+A+ MA Y G ++ RN
Sbjct: 73 HEPAIELAERLVEITPEGLEKVFFSDSGSVAVEVALKMALQYWQNQGRPGKTRFLAFRNG 132
Query: 194 YHGNAAGTMGATAQS--NWKFNVVQTGVHHALNPDPYRGVFGADGEM-YAKDVQDLIDFG 250
YHG+ G M + F + V P YR D E ++ L++
Sbjct: 133 YHGDTFGAMSVGDVGGFHALFEPLLFEVVFIPAPPCYRCWDPDDCEAECLAALEALLEE- 191
Query: 251 TSGHVAGFLSESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309
+ +A F+ E + QG GG+ P YL + + + G L IADE+ GF RTG F
Sbjct: 192 HADEIAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVLLIADEIATGFGRTGKLF-A 250
Query: 310 FEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL----TRRNYFN--TFGGNPVCTA 362
E GV PDI+ ++KG+ G +PL A +TT EI E + + + T+ GNP+ A
Sbjct: 251 CEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAFYSDDEGKAFMHGHTYTGNPLACA 310
Query: 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK 422
A A L +++++ + + L+ L L+D G + DVR G + VE V D +
Sbjct: 311 AALASLDLLEEEDWLEQVARIEAQLRAGLAPLRDHPG-VADVRVLGAIGAVELVRDVEPY 369
Query: 423 TPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
AK I E GVL+ GNV + PP T E+ + L +
Sbjct: 370 IGAK-----IQQFFLERGVLLRP---LGNVIYLMPPYIITDEELEKLTAAI 412
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 222 bits (567), Expect = 2e-67
Identities = 133/431 (30%), Positives = 204/431 (47%), Gaps = 44/431 (10%)
Query: 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA 144
+ GK YL+D+NG +Y D G T GH + D+I Q + + + +Y + +
Sbjct: 17 ISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEV---SFVYRSQFTS 73
Query: 145 DFAEALASKM----PGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAY 194
+ AE LA K+ PG+L FF NSG+EANE A+ +A + G + I+S +Y
Sbjct: 74 EPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSY 133
Query: 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALN-------PDPYRGVFGADGEM----YAKDV 243
HG TMGA + S + + L P YR A ++
Sbjct: 134 HGI---TMGALSMSG--HPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188
Query: 244 QDLIDFGTSGHVAGFLSESIQGV-GGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR 302
+ I+ + H+A F++E I G G + GY + + L IADEV G R
Sbjct: 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR 248
Query: 303 TGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYF----NTFGGN 357
TG+ F E GV PDI+T+ KG+G G P+ A V + + E + R + +T N
Sbjct: 249 TGAMF-AMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSAN 307
Query: 358 PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417
P+ A AVL+ ++K L A G YL + L ++ + IIGDVRG+G L+GVEFV
Sbjct: 308 PLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVA 367
Query: 418 DRQLKTPAKAE---TLYIMDKMKEMGVLV-----GKGGFYGNVFRITPPLCFTKEDADYL 469
D++ K P ++ + G+L+ G+ G G+ I PP+ T + D L
Sbjct: 368 DKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDEL 427
Query: 470 VDVMDYSLSKM 480
+ + S+ +M
Sbjct: 428 LSIFAKSVEEM 438
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 218 bits (556), Expect = 1e-65
Identities = 147/443 (33%), Positives = 232/443 (52%), Gaps = 29/443 (6%)
Query: 53 PPYDGPSADEILAKRKTFLSPSL-FHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATV 111
PP GP A E++ + K LSP + L+ PL G + D +G ++D G A
Sbjct: 10 PP--GPKAKELIEREKRVLSPGIGVKLF--PLVPKRGFGALIEDVDGNVFIDFLAGAAAA 65
Query: 112 CCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA-DFAEALASKMPGNLKVVFFTNSGTEA 170
G+ HP +V ++ Q+ IQHS + Y + A AE LA P V F SG++A
Sbjct: 66 STGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDA 125
Query: 171 NELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATA----QSNWK--FNVVQTGVHHALN 224
++AI +++ T I++ AYHG T+GAT+ QS+ K F+ + V
Sbjct: 126 VDMAIKVSKFSTRRPWILAFIGAYHGQ---TLGATSVAAFQSSQKRGFSPLMPNVVWIPY 182
Query: 225 PDPYRGVFGADG-----EMYAKDVQDLIDFGTS-----GHVAGFLSESIQGVGGIIELAP 274
P+PYR +G +G E+ + + L ++ S VA +E IQG GI+
Sbjct: 183 PNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPE 242
Query: 275 GYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGA 334
+ + K + + G L + DEVQ G RTG F E V PD++ KG+ +G+ L
Sbjct: 243 NFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFEVKPDLIIFGKGVASGMGLSG 301
Query: 335 VVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTAL 394
V+ E+ + LT + T NPV +AA A L++I+++ L NA VG ++K+RL +
Sbjct: 302 VIGRKELMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEM 360
Query: 395 KDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFR 454
K+ + +IGDVRG+G ++GVE V ++ P T I + E+G+++ G +GNV R
Sbjct: 361 KESFEVIGDVRGKGLMIGVEIV--KENGKPDPELTGKICWRAFELGLILPSYGMFGNVIR 418
Query: 455 ITPPLCFTKEDADYLVDVMDYSL 477
ITPPL TKE A+ +++M+ ++
Sbjct: 419 ITPPLVITKEIAEKGLEIMERAI 441
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 213 bits (543), Expect = 2e-64
Identities = 119/411 (28%), Positives = 187/411 (45%), Gaps = 43/411 (10%)
Query: 77 HLYSKPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134
H Y PL VV GK +++D G++Y D + V GHCHP ++ +++NQ +++ +
Sbjct: 8 HNYH-PLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLT 66
Query: 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY----TGCND---- 186
+ + N + + + + G KV NSG EA E A+ AR + G +
Sbjct: 67 SRAFYNDVLGLAEKYITD-LFGYDKV-LPMNSGAEAGETALKFARKWGYEVKGIPENQAK 124
Query: 187 IISLRNAYHGNAAGTMGATAQSNW--KFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244
II + G G A+ F G Y D E K +Q
Sbjct: 125 IIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELV----DYN-----DVEALEKLLQ 175
Query: 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304
D +VA F+ E IQG G+I GYL VY+ KK L I DE+Q G RTG
Sbjct: 176 D-------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG 228
Query: 305 SHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAA 363
+ GV PDIV + K + G+ P+ AV+ ++ V+ + +T+GGNP+ A
Sbjct: 229 -KLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAV 287
Query: 364 GHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT 423
L+V++++KL NA +G ++ L L K + ++RG+G L + F
Sbjct: 288 AVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVF-------D 340
Query: 424 PAKAETLY-IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
+ + + K+KE G+L N+ R PPL TKE D ++++
Sbjct: 341 HSDGVNAWDLCLKLKENGLLAKPTH--DNIIRFAPPLVITKEQLDQALEII 389
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 212 bits (542), Expect = 1e-63
Identities = 154/450 (34%), Positives = 223/450 (49%), Gaps = 29/450 (6%)
Query: 54 PYDGPSADEILAKRKTFLS-----PSLFHLYSKPLNVVDGKMQ--YLFDENGRRYLDAFG 106
D A A +T+L+ S Y + L + K Q ++ D G +YLD
Sbjct: 6 RIDLLGAQATNATNETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLA 65
Query: 107 GIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIAD-FAEALASKMPGNLK--VVFF 163
G T+ GH HP V+ SI + + L L + D F+E L S +PG K + F
Sbjct: 66 GAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQF 125
Query: 164 TN-SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT---GV 219
T SG +A E AI +A+ YTG +++IS YHG G + T + K N V GV
Sbjct: 126 TGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPK-NAVNGLMPGV 184
Query: 220 HHALNPDPYRGVFGADGEMYAKDV----QDLIDFGTSGHV--AGFLSESIQGVGGIIELA 273
P YR G GE K + ++ I+ SG A + E+IQG GG+
Sbjct: 185 QFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAP 244
Query: 274 PGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLG 333
+L + + +K G L I DEVQAGFARTG F FE G+ PDI+ M+K +G G+PL
Sbjct: 245 VEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPDIIVMSKAVGGGLPL- 302
Query: 334 AVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTA 393
AV+ + + + TF GN + A G LK+++++ L NA G +LK +L
Sbjct: 303 AVLGIKKEFDAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAE 362
Query: 394 LKDKYGIIGDVRGRGFLLGVEFVTDRQLKT-----PAKAE-TLYIMDKMKEMGVLVGKGG 447
L+ +Y IG+VRGRG ++G+E V +RQ PA E I E G+L+ +GG
Sbjct: 363 LQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG 422
Query: 448 FYGNVFRITPPLCFTKEDADYLVDVMDYSL 477
GNV R+ PPL T+ + + +D + +L
Sbjct: 423 RNGNVVRLLPPLLITQAECEEFIDRFEQAL 452
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 212 bits (541), Expect = 2e-63
Identities = 141/429 (32%), Positives = 201/429 (46%), Gaps = 41/429 (9%)
Query: 77 HLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTV 136
+ V G+ YL D G+RYLDA GG A C GH HP V+ +I QI R+ ++
Sbjct: 8 SPRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHT 67
Query: 137 LYLNHAIAD-FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIIS 189
+ A+ A+ L + P L+ V+F + G+EA E A+ +AR Y I+
Sbjct: 68 SFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIA 127
Query: 190 LRNAYHGNAAGTMGATAQSN--WK---FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQ 244
R +YHGN T+GA A W+ F + HH YR GE Q
Sbjct: 128 RRQSYHGN---TLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRE--QRAGESDEAYGQ 182
Query: 245 DLID--------FGTSGHVAGFLSESIQG-VGGIIELAPGYLPAVYKSIKKAGGLCIADE 295
L D G VA F++E++ G G + PGY + + + G L I DE
Sbjct: 183 RLADELEAKILELG-PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDE 241
Query: 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYF--- 351
V G RTG + E GV PD+VT+AKG+G G P+GAV+ + I + + + F
Sbjct: 242 VMCGMGRTG-TLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQH 300
Query: 352 -NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410
+T+ G+ AA AV +VI +D L N G L+ RL ++ +GD+RGRG
Sbjct: 301 GHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLF 360
Query: 411 LGVEFVTDRQLKTP-AKAETLYIMDKMKEM--GVLV--GKG---GFYGNVFRITPPLCFT 462
+GVE V DR K P A L+ K + M G++V G G G+ + PP T
Sbjct: 361 VGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIIT 420
Query: 463 KEDADYLVD 471
D +V+
Sbjct: 421 AAQIDEIVE 429
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 209 bits (534), Expect = 3e-62
Identities = 125/424 (29%), Positives = 199/424 (46%), Gaps = 35/424 (8%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYL 139
PL + G+ Y++D+ G+RY++ G+ +V G +V++ Q+K++ H+
Sbjct: 31 PLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKS 90
Query: 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN------DIISLRNA 193
+ + D AE L + P + VFFTNSG+EAN+ + + Y IIS +
Sbjct: 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRG 150
Query: 194 YHGN--AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM-------YAKDVQ 244
YHG A+ ++ ++ F++ + H P YR FG GE A +++
Sbjct: 151 YHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYR--FGLPGESEEAFATRLANELE 208
Query: 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304
LI +A F+ E + G GG+I Y + ++K L +ADEV GF RTG
Sbjct: 209 ALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG 268
Query: 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNY-FNTFG------G 356
+ F G E G+ PDI+ M+K + + PL AV+ ++ + + + TFG G
Sbjct: 269 NMF-GCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASG 327
Query: 357 NPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416
+PV A L +I++ L NA G+ L+ RL AL D + ++G+VRG G + VE V
Sbjct: 328 HPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALAD-HPLVGEVRGVGLIAAVELV 386
Query: 417 TDRQLKTPAKAE---TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
D+ KTP + E GV+ G+ PPL T D +VD
Sbjct: 387 ADKATKTPFEPPGKVGARANAAAHEHGVISRA---MGDTLAFCPPLIITAAQVDEMVDRF 443
Query: 474 DYSL 477
+L
Sbjct: 444 GRAL 447
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 205 bits (523), Expect = 2e-61
Identities = 119/394 (30%), Positives = 184/394 (46%), Gaps = 36/394 (9%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P V G+ ++D+ G+ Y+D GGIA GH HP +V +++ Q ++ H Y N
Sbjct: 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNE 77
Query: 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYH 195
+ A+ L + VFF NSG EANE A+ +AR Y ++I++ +N++H
Sbjct: 78 PVLRLAKKLVDATFADK--VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFH 135
Query: 196 GNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG 253
G T+ Q + F + G+ HA PY + A + LI T
Sbjct: 136 GRTLFTVSVGGQPKYSQGFAPLPGGIKHA----PYNDLAAA---------KALISDKT-- 180
Query: 254 HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH 313
+ E IQG GG++ P +L + + + L I DEVQ G RTG + + +
Sbjct: 181 --CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYMHY 237
Query: 314 GVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373
GV PDI+T AK +G G P+GA++TT EIA L + T+GGNP+ A VL ++
Sbjct: 238 GVTPDILTSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNT 297
Query: 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIM 433
+L + L + +Y + ++RG+G L+G Q KA+ +
Sbjct: 298 PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQ----GKAKQ--FV 351
Query: 434 DKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
+ E GV+ G NV R P L + +D D
Sbjct: 352 NAAAEEGVIALIAG--PNVVRFAPSLVISDDDID 383
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 203 bits (517), Expect = 8e-61
Identities = 130/398 (32%), Positives = 200/398 (50%), Gaps = 41/398 (10%)
Query: 75 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQH 133
LF Y + + V + YL D +G++YLD GI G HP V ++ Q I H
Sbjct: 4 LFQNYKRAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWH 62
Query: 134 STVLYLNHAIADFAEALASKMPGNLK-VVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192
S LYLN E +A K+ G+ + FF NSG EANE AI +AR TG +II+ +N
Sbjct: 63 SPNLYLN----SLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQN 118
Query: 193 AYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250
++HG G+M AT Q K F +A+ D V+ L
Sbjct: 119 SFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFND-------------LNSVKAL---- 161
Query: 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310
+ + A + E +QG G++ ++ A+ ++ G L I DEVQ G RTG + F
Sbjct: 162 VNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AF 220
Query: 311 EAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370
E +G+ PDI T+AKG+ NG+P+GA++ + ++ +TFGGN + AA A L +
Sbjct: 221 EHYGIEPDIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDI 280
Query: 371 IQKDKLQNNAHVVGSYLKERLT-ALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAET 429
+ A G+YL+E+L AL+DK + VRG G+++G+E D ++
Sbjct: 281 MLTAGFLEQALENGNYLQEQLQKALQDKETVT-TVRGLGYMIGIETTAD-----LSQ--- 331
Query: 430 LYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
+++ ++ G++V G NV R+ PPL TKE+ +
Sbjct: 332 --LVEAARDKGLIVLTAG--TNVIRLLPPLTLTKEEIE 365
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 203 bits (518), Expect = 1e-60
Identities = 121/392 (30%), Positives = 182/392 (46%), Gaps = 40/392 (10%)
Query: 86 VDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIAD 145
V G+ ++D+ G+ Y+D GGIA GHCHP +V ++ Q +++ H + ++ N
Sbjct: 27 VRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEP--- 83
Query: 146 FAEALASKMPGNL--KVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGN 197
A LA K+ + VFF NSG EANE A +AR Y +II+ N++HG
Sbjct: 84 -ALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGR 142
Query: 198 AAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255
T+ Q + F + H P+ + V+ +ID H
Sbjct: 143 TLFTVSVGGQPKYSDGFGPKPADITHV----PFNDL---------AAVKAVID----DHT 185
Query: 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV 315
+ E IQG GG+I P +L + + + L I DEVQ G RTG + + +GV
Sbjct: 186 CAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG-DLFAYMHYGV 244
Query: 316 VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375
PDI+T AK +G G P+GA++TT EIA + +T+GGNP+ A AV +I +
Sbjct: 245 TPDILTSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPE 304
Query: 376 LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK 435
+ + L + KYG+ ++RG G L+G E LK K ++
Sbjct: 305 VLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAE------LKPQYKGRARDFLNA 358
Query: 436 MKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
E GV+V G +V R P L + D D
Sbjct: 359 AAEEGVMVLVAG--PDVLRFAPSLVIEEADID 388
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 204 bits (521), Expect = 2e-60
Identities = 119/420 (28%), Positives = 210/420 (50%), Gaps = 23/420 (5%)
Query: 70 FLSPSLFHLYSKP-LNVVDG-KMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQ 127
FL ++ S P L+V+ + Y+ D +G++Y+D F G G+ HP+V++ + Q
Sbjct: 45 FLHQAM----STPCLDVLASAEGIYIEDVDGKKYMD-FHGNNVHQLGYGHPHVIEKVKEQ 99
Query: 128 IKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDI 187
+ ++ S + N + AE L G L V F GT A +A+ +AR TG +
Sbjct: 100 MAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKV 159
Query: 188 ISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFG---ADGEMYAKD 242
+SL +++HG + + ++ ++ + + GV YRG F YA
Sbjct: 160 VSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADY 219
Query: 243 VQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR 302
++ +I+ G + F++E+++ + + Y V + K L I DE+ G R
Sbjct: 220 LEYVIE--KEGGIGAFIAEAVRNTDVQVP-SKAYWKRVREICDKHNVLLIIDEIPNGMGR 276
Query: 303 TGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTP--EIAEVLTRRNYFNTFGGNPV 359
TG F +A+G+ PDI+ + KG+G G +P+ A++T A ++ +Y T +P+
Sbjct: 277 TGEWF-THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHY--THEKSPL 333
Query: 360 CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR 419
AA A ++VI+++ L +++ERL +K KY +IGDVRG G L GVE VTDR
Sbjct: 334 GCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDR 393
Query: 420 QLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
K A E ++ + G+ GNV +++PPL T+E+ + +++ +++K
Sbjct: 394 HTKERAYDEAEAVLYRCLNNGLSFKVSQ--GNVIQLSPPLIITREELTQALAILEEAIAK 451
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 204 bits (521), Expect = 2e-60
Identities = 123/421 (29%), Positives = 195/421 (46%), Gaps = 52/421 (12%)
Query: 92 YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRI---------QHSTVLYLNHA 142
YL+D G + LD G+ V G+ + D+ Q++ + H + L
Sbjct: 43 YLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIEL--- 99
Query: 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC------NDIISLRNAYHG 196
A LA P VFFTNSG+EAN+ + M R Y IIS +N YHG
Sbjct: 100 ----AAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHG 155
Query: 197 N--AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY----AKDVQDLIDFG 250
+ A ++G + + ++ G+ H P + E + A+ ++ I
Sbjct: 156 STVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL 215
Query: 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310
+ +VA F+ E IQG GG+I Y P + + +K L +ADEV GF RTG ++G
Sbjct: 216 GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG-EWFGS 274
Query: 311 EAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN-YFN---TFGGNPVCTAAGH 365
+ G+ PD++T+AKG+ +G IP+GAV +AEVL FN T+ G+PV A
Sbjct: 275 QHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVAL 334
Query: 366 AVLKVIQKDKLQNNAH-VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP 424
A L++++ + + G YL++RL L D + ++G+VRG G + +E V D+ +
Sbjct: 335 ANLRILRDEGIVERVRDDTGPYLQKRLRELAD-HPLVGEVRGVGLVGAIELVKDKATRER 393
Query: 425 AKAETLYIMDKMKEMGVLVGKGGFYGN-VFR-------ITPPLCFTKEDADYLVDVMDYS 476
+A +G + F + R I+PPL T + D LV+ +
Sbjct: 394 FEAGG--------GVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDELVEKARKA 445
Query: 477 L 477
L
Sbjct: 446 L 446
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 202 bits (516), Expect = 4e-60
Identities = 126/385 (32%), Positives = 191/385 (49%), Gaps = 22/385 (5%)
Query: 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALA 151
++D GR YLD GGIA + GH HP VV ++ Q+K++ H+ L + + E +
Sbjct: 35 VWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMN 94
Query: 152 SKMPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSN 209
K+PG+ K + T +G+EA E A+ +AR T + +I+ AYHG T+ T + N
Sbjct: 95 QKVPGDFAKKTLLVT-TGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVN 153
Query: 210 ---WKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSGHVAGFLSE 261
++ V+ AL P P GV D ++ D +A + E
Sbjct: 154 PYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAA-------PEDIAAIIIE 206
Query: 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVT 321
+QG GG +P ++ + + G + IADEVQ G RTG+ + E GV D+ T
Sbjct: 207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQMGVAADLTT 265
Query: 322 MAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAH 381
AK I G PL V E+ + + T+ GNP+ AA AVLKV +++ L A+
Sbjct: 266 FAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKAN 325
Query: 382 VVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGV 441
+G LK+ L A+ +K+ IGDVRG G ++ +E D P T I+ + ++ G+
Sbjct: 326 ALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGL 385
Query: 442 LVGKGGFYGNVFRITPPLCFTKEDA 466
++ G Y NV RI PL T EDA
Sbjct: 386 ILLSCGPYYNVLRILVPL--TIEDA 408
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 201 bits (512), Expect = 7e-60
Identities = 130/416 (31%), Positives = 193/416 (46%), Gaps = 57/416 (13%)
Query: 86 VDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIAD 145
V GK L+D G+ YLD GIA GH P V ++ Q + H + +Y +
Sbjct: 2 VSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVE 61
Query: 146 FAEAL-----ASKMPGNLKVVFFTNSGTEANELAIMMARLY-------------TGCNDI 187
A+ L A + VFF NSGTEANE AI AR Y + +
Sbjct: 62 LAKRLVASSFADR-------VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEF 114
Query: 188 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245
+S N++HG G + T++ ++ F + GV Y + E K +Q
Sbjct: 115 VSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV----EY-----GNLEAARKLIQ- 164
Query: 246 LIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGS 305
G A E +QG GGI +L + +AG L + DEVQ G RTG
Sbjct: 165 ------KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG- 217
Query: 306 HFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNP-VCTAAG 364
+ W EA+GV PDI+T+AK + G+P+GAV+ T ++A + ++ +TF G P VC AA
Sbjct: 218 YLWAHEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAA- 276
Query: 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP 424
AVL I K + G YL+E L + +VRG G L+G+ QL P
Sbjct: 277 LAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGI------QLDVP 330
Query: 425 AKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
A ++D ++ G+LV G G+V R+ PPL ++ + + V+++ L +
Sbjct: 331 AGP----LVDACRDSGLLVLTAG-KGDVVRLVPPLVISEAELEQAVEILADCLPAL 381
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 201 bits (514), Expect = 7e-60
Identities = 135/380 (35%), Positives = 187/380 (49%), Gaps = 25/380 (6%)
Query: 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST---VLYLNHAIADFAEA 149
L+D GR Y+D GIA + GH HP VV ++ Q+ + H+ V Y ++ AE
Sbjct: 34 LWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYV--TLAER 91
Query: 150 LASKMP--GNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTM---GA 204
+ + P G K FFT +G EA E A+ +AR YTG +I+ A+HG TM G
Sbjct: 92 INALAPIDGPAKTAFFT-TGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGK 150
Query: 205 TAQSNWKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSGHVAGFL 259
A F + HAL P+ GV + ++ D+ VA L
Sbjct: 151 VAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-------APDQVAAIL 203
Query: 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI 319
E IQG GG P ++ A+ + G L IADEVQ GFARTG F E + V PD+
Sbjct: 204 LEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLF-AMEYYDVKPDL 262
Query: 320 VTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNN 379
+TMAK +G G+P+ AVV E+ + T+ GNP+ AA AVL VI ++KL
Sbjct: 263 ITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQR 322
Query: 380 AHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEM 439
A ++G++L E L K I D+R RG ++ VEF D Q P+ T + E
Sbjct: 323 ALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEF-NDPQTGKPSPEFTRQYQRQALEE 381
Query: 440 GVLVGKGGFYGNVFRITPPL 459
G+L+ G +GNV R PL
Sbjct: 382 GLLLLSCGVHGNVIRFLYPL 401
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 201 bits (513), Expect = 3e-59
Identities = 133/407 (32%), Positives = 202/407 (49%), Gaps = 25/407 (6%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSI--VNQIKRIQHSTVLYL 139
PL + + Y+ D GR+++D G T+ GH HP V+++I V + H+ L L
Sbjct: 46 PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHT--LDL 103
Query: 140 NHAIAD-FAEALASKMPGNL----KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194
+ D F + L + +P K+ F +GT+A E A+ + + TG + ++S + Y
Sbjct: 104 TTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGY 163
Query: 195 HGNAAGTMGATAQSNWKFNVVQ--TGVHHALNPDPYRGVFGADGE----MYAKDVQDLID 248
HG + G + K + GV P YR FG GE +++L+D
Sbjct: 164 HGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLD 223
Query: 249 FGTSGHV--AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH 306
SG V A + E +QG GG+I +L + + ++AG I DE+Q+GF RTG
Sbjct: 224 DPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK- 282
Query: 307 FWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHA 366
+ FE G++PD+V ++K IG +PL AVV E + + TF GN + AAG A
Sbjct: 283 MFAFEHAGIIPDVVVLSKAIGGSLPL-AVVVYREWLDTWQPGAHAGTFRGNQMAMAAGSA 341
Query: 367 VLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV-----TDRQL 421
L+ I++ +L +A +G L+E L L+ Y +GDVRGRG +LGVE V D
Sbjct: 342 TLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALG 401
Query: 422 KTPAKAE-TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
PA E I + G+++ GG +G+V R PPL T E D
Sbjct: 402 HPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQID 448
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 197 bits (503), Expect = 2e-58
Identities = 133/420 (31%), Positives = 200/420 (47%), Gaps = 48/420 (11%)
Query: 74 SLFHLYSKPLNV-VDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132
SL ++ ++P V GK +L+D NG+RYLD G A C GHC+P +V+++ Q +++
Sbjct: 10 SLMYITNRPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI 69
Query: 133 HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY-----TGCNDI 187
+ + + N +A A L VFF NSG EANE AI +AR + G +I
Sbjct: 70 NPSPAFYNEPMAKLAGLLTQH--SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEI 127
Query: 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK------ 241
I+ +++HG TM A+ + W D +F + K
Sbjct: 128 ITFDHSFHGRTLATMSASGKPGW---------------DT---IFAPQVPGFPKAELNDI 169
Query: 242 -DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300
V+ LI T VA L E +QG GG+I ++ + K+ G L I DEVQ G
Sbjct: 170 ASVEKLITDKT---VAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGC 225
Query: 301 ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVC 360
RTG+ F +E G+ PDI+T+ KGIG G+PL A++ E+A V + T+ GNP+
Sbjct: 226 GRTGTLF-AYELSGIEPDIMTLGKGIGGGVPLAALLAKAEVA-VFEAGDQGGTYNGNPLM 283
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
TA G AV+ + G YLKE+L L ++ G+ G RG G L + D
Sbjct: 284 TAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERGLEG-ERGEGLLRALLLGKDIG 342
Query: 421 LKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
+ KA M+ G+L+ N+ R P L T E+ D ++ ++ L K+
Sbjct: 343 PQIVEKAR------DMQPDGLLLNAP--RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 198 bits (504), Expect = 3e-58
Identities = 123/402 (30%), Positives = 185/402 (46%), Gaps = 20/402 (4%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P + ++ D G+ YLD G T+ GH HP + I++ ++ L L
Sbjct: 22 PTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTT 81
Query: 142 AIAD-FAEALASKMPG---NLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197
+ D F EAL + +P + K+ F SG +A E AI +A+ YTG ++IS +HG
Sbjct: 82 PLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGM 141
Query: 198 AAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDV----QDLIDFGT 251
G + T K ++ GV P YR FG GE + ++ I+
Sbjct: 142 TIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVE 201
Query: 252 SGHV--AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309
SG A + E+IQG GG++ +L + + +K I DEVQAGF R+G+ F
Sbjct: 202 SGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-A 260
Query: 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLK 369
FE G+ PD V M+K +G G+PL ++ PE + + TF GN + G L
Sbjct: 261 FEHAGIEPDFVVMSKAVGGGLPLAVLLIAPEF-DAWQPAGHTGTFRGNQLAMVTGTEALN 319
Query: 370 VIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAET 429
+ D L NA G + L + ++ IG+VRGRG + G+ V +RQ K A
Sbjct: 320 YWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYP 379
Query: 430 LY------IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKED 465
I E G+L+ GG G VFR+ P+ +E+
Sbjct: 380 RDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEE 421
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 198 bits (505), Expect = 4e-58
Identities = 138/448 (30%), Positives = 217/448 (48%), Gaps = 42/448 (9%)
Query: 61 DEILAK-RKTFLSPSLFHLY------SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCC 113
DE+LA R F PS HL V G+ + D GRRY+DAF G+ V
Sbjct: 6 DELLAWDRDHFFHPST-HLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNV 64
Query: 114 GHCHPYVVDSIVNQIKRIQ--HSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEAN 171
G+ V ++I Q K + H+ V + A ++ + + P + V++ SG++AN
Sbjct: 65 GYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN 124
Query: 172 ELAIMMARLYTGC------NDIISLRNAYHGN--AAGTMGATAQSNWKFNVVQTGVHHAL 223
E I + Y IIS YHG+ G++ + + F++ V H
Sbjct: 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTE 184
Query: 224 NPDPYRGVFGADGEMY--------AKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPG 275
P YR AD M A ++++LI +A F++E + G GGI+ G
Sbjct: 185 APHYYRR---ADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAG 241
Query: 276 YLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGA 334
Y PA+ +KK L IADEV GF R GS F G + +G+ PD++T+AKG+ + PL
Sbjct: 242 YWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYGIEPDLITVAKGLTSAYAPLSG 300
Query: 335 VVTTPEIAEVLTRRNYFN-------TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYL 387
+ ++ +VL + + + T+ G+P+C AA A L +++++ L NA VG+Y
Sbjct: 301 SIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYF 360
Query: 388 KERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKT---PAKAETLYIMDKMKEMGVLVG 444
+ RL A + ++G+VRG G L VEFV DR +T PA + E GV +
Sbjct: 361 RARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGV-IA 419
Query: 445 KGGFYGNVFRITPPLCFTKEDADYLVDV 472
+ +G++ PPL T+ +AD +V +
Sbjct: 420 RAMPHGDILGFAPPLVLTRAEADEIVAI 447
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 195 bits (498), Expect = 1e-57
Identities = 128/418 (30%), Positives = 204/418 (48%), Gaps = 48/418 (11%)
Query: 77 HLYSKPLNVVDGKMQ--YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134
H Y PL VV K + +++D G+RYLD + V GHCHP +V ++ Q +++ S
Sbjct: 14 HNY-HPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLS 72
Query: 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCND 186
+ + N +FAE + +K+ G KV+ N+G EA E AI +AR +
Sbjct: 73 SRAFYNDVFGEFAEYV-TKLFGYDKVLP-MNTGAEAVETAIKLARKWGYKVKGIPENQAI 130
Query: 187 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK----D 242
I+S + +HG T+GA + S +PD FG + K +
Sbjct: 131 IVSAKGNFHGR---TLGAISMST--------------DPDSRTN-FGPYVPGFKKIPYNN 172
Query: 243 VQDLID-FGTSG-HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300
++ L + G +V F+ E IQG G++ GYL V + K L IADE+Q G
Sbjct: 173 LEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGL 232
Query: 301 ARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFNTFGGNPV 359
RTG + V PDIV + K + G+ P+ AV+ ++ + + +T+GGNP+
Sbjct: 233 GRTGK-LLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPL 291
Query: 360 CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR 419
A A L+V++++KL NA +G +++L L II +VRGRG L +
Sbjct: 292 ACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPK--PIITEVRGRGLLNAIVI---D 346
Query: 420 QLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477
+ KT A L + K+KE G+L +GN+ R+ PPL T+E D ++++ +
Sbjct: 347 ESKTGRTAWDLCL--KLKEKGLLAKPT--HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 194 bits (496), Expect = 2e-57
Identities = 121/396 (30%), Positives = 188/396 (47%), Gaps = 46/396 (11%)
Query: 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA 144
V G+ L+D+ G+ Y+D GGIA GH HP + +++ Q + H+ Y N +
Sbjct: 25 PVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVL 84
Query: 145 DFAEAL-----ASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNA 193
A+ L A + VFF NSG EANE A+ +AR Y + + I++ +NA
Sbjct: 85 RLAKKLIDATFADR-------VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNA 137
Query: 194 YHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGT 251
+HG T+ A Q + F + + HA Y + A LID T
Sbjct: 138 FHGRTLFTVSAGGQPKYSQDFAPLPPDIRHA----AYNDLNSA---------SALIDDQT 184
Query: 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311
+ E IQG GG+I +L + + + L I DEVQ G RTG + +
Sbjct: 185 ----CAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYM 239
Query: 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVI 371
+GV PD++T AK +G G P+GA++TT + A V+T + T+GGNP+ +A VL++I
Sbjct: 240 HYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI 299
Query: 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLY 431
++ N + ERL + +YG+ ++RG G L+G + KA+
Sbjct: 300 NTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQ-- 353
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
I + + GV+V G NV R P L ++E+
Sbjct: 354 ISQEAAKAGVMVLIAG--PNVVRFAPALNISEEEIT 387
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 192 bits (491), Expect = 4e-56
Identities = 133/428 (31%), Positives = 197/428 (46%), Gaps = 41/428 (9%)
Query: 85 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA 144
+V G+ Y++D+ G+RYLD G+ V GH + ++ Q + + H A
Sbjct: 38 IVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPA 97
Query: 145 -DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGN 197
+ AE LA+ PG+L VFFT G+EA E A +A+ Y G + +IS AYHG
Sbjct: 98 IELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGT 157
Query: 198 AAGTMGATAQSNWK--FNVVQTGVHHALNPDPYR-GVFGADGEMY----AKDVQDLIDFG 250
G + T +K F + G N + YR G D E + A +++ I+F
Sbjct: 158 TQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE 217
Query: 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF 310
VA E +Q GG PGY V + + L ++DEV F R G F G
Sbjct: 218 GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GC 276
Query: 311 EAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAE-VLTRRNYF---NTFGGNPVCTAAGH 365
E G VPDI+T AKGI +G PLGA++ + + E L F TFGG+PV A
Sbjct: 277 ERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVAL 336
Query: 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLK--- 422
A L + +++ L ++ + L L D I+GDVRG G+ G+E V D+ K
Sbjct: 337 ANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETF 395
Query: 423 TPAKAETLYIMDKMKEMGVLVGK---GGFY------GN-VFRITPPLCFTKEDADYLVDV 472
T ++E L G L G Y G+ V ++ PPL +E+ D + +
Sbjct: 396 TDDESERLL-------RGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQI 448
Query: 473 MDYSLSKM 480
+ L++
Sbjct: 449 LRSVLTEA 456
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 191 bits (486), Expect = 5e-56
Identities = 131/410 (31%), Positives = 194/410 (47%), Gaps = 48/410 (11%)
Query: 74 SLFHLY---SKPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI 128
SL H Y +P VV G+ ++D+ GR YLD GIA GH P +V ++ Q
Sbjct: 10 SLAHYYLPVYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQA 69
Query: 129 KRIQHSTVLYLNHAIADFAEAL--ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND 186
++ H++ ++ + AE L AS+ + VF NSGTEANE AI + R +
Sbjct: 70 GKLWHTSNVFYSAPPLKLAEELVTASRFA---EKVFLCNSGTEANEAAIKLVRKWASSQG 126
Query: 187 -------IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMY 239
I++ R ++HG + ATAQ + Q G +P G F Y
Sbjct: 127 RPADKRVIVTFRGSFHGRTLAAVTATAQPKY-----QEGY------EPLPGGF-----RY 170
Query: 240 A--KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297
DV+ L G VA + E IQG GG++ APG+L V + L + DE+Q
Sbjct: 171 VDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ 230
Query: 298 AGFARTGSHF--WGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG 355
G RTG+ F W + V PDIVT+AK +G G P+GA++ P++AE + + TFG
Sbjct: 231 CGMGRTGTLFAHWQEQ---VTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG 287
Query: 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415
GNP+ A L+ + ++ N + L+ L AL ++G+ VRGRG +LG
Sbjct: 288 GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVL 347
Query: 416 VTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKED 465
+ A I+D E G+L+ + G +V R P L T +
Sbjct: 348 APAHAGQAGA------ILDLAAEHGLLLLQAG--PDVLRFVPALNLTDAE 389
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 187 bits (477), Expect = 4e-55
Identities = 123/389 (31%), Positives = 193/389 (49%), Gaps = 48/389 (12%)
Query: 78 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVL 137
LY K L +V G+ Y++D GRRYLD GI GH HP V+ + Q++++ + +
Sbjct: 3 LYRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPM 62
Query: 138 YLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGN 197
+ + + E L+ + N + V+ NSGTEA E A+ ARLYTG +II++ NA+HG
Sbjct: 63 FEHEEKEEMLEELSKWV--NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGR 120
Query: 198 AAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV 255
G + AT + ++ F + G H P+ V A + +
Sbjct: 121 TMGALSATWKPKYREDFEPLVPGFKHI----PFNDVEAAKEAI-------------TKET 163
Query: 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGV 315
A + E IQG GGI+ ++ + + G L IADEVQ+G RTG F E + V
Sbjct: 164 AAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYKV 221
Query: 316 VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDK 375
PDIVTM KGIGNG+P+ +T ++ R + +TFGGNP+ A L+++++++
Sbjct: 222 EPDIVTMGKGIGNGVPVSLTLTNFDVE----RGKHGSTFGGNPLACKAVAVTLRILRRER 277
Query: 376 LQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK 435
L A E+ +K + + RGRG ++G+ LK P +++
Sbjct: 278 LVEKA-------GEKFIEIKGERVVT--TRGRGLMIGI------VLKKPVGK----YVEE 318
Query: 436 MKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
++ G LV G V R+ PPL +K+
Sbjct: 319 LQNRGYLVHTAG--QRVIRLLPPLIISKD 345
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 187 bits (477), Expect = 3e-54
Identities = 129/387 (33%), Positives = 184/387 (47%), Gaps = 31/387 (8%)
Query: 88 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFA 147
G + L D G ++D GG GH +P V+ ++ NQ+ + + L+ A A
Sbjct: 64 GGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLA 123
Query: 148 EALASKMPGNLKVVFFTNSGTEANELAIMMARLYT---GCNDIISLRNAYHGNAAGTMGA 204
+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + A
Sbjct: 124 KTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSA 183
Query: 205 TAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262
TA+ ++ F + G HH FG D E K + + G VA + E
Sbjct: 184 TAKPAFRKPFMPLLPGFHHV--------AFG-DIEAMLKALNECKKTGDD--VAAIILEP 232
Query: 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM 322
IQG GG+I GYLPAV + G L I DEVQ G RTG F E GV PDI+ +
Sbjct: 233 IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF-ACEHEGVQPDILCL 291
Query: 323 AKGIGNGI-PLGAVVTTPEIAEVLTRRNYFN--TFGGNPVCTAAGHAVLKVIQKDKLQNN 379
AK +G G+ P+GA + T + VL + + TFGGNP+ AA A + + + L
Sbjct: 292 AKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQ 351
Query: 380 AHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDK-MK 437
A + G +L + L +Y +I + RG+G L+ +EF E Y K +
Sbjct: 352 AAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFR---------DNEIGYAFAKELF 402
Query: 438 EMGVLVGKGGFYGNVFRITPPLCFTKE 464
+ +LV RI PPL T E
Sbjct: 403 QQNILVAGTLNNAKSIRIEPPLTITIE 429
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 184 bits (470), Expect = 5e-53
Identities = 124/416 (29%), Positives = 198/416 (47%), Gaps = 29/416 (6%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL-N 140
PL + G+ + L+D NG Y D I GH P + ++I Q+ +I HST+L L N
Sbjct: 39 PLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLAN 98
Query: 141 HAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMA------RLYTGCNDIISLRNAY 194
AE L +P LK VF+++SG A E+AI MA + ++L+NAY
Sbjct: 99 VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAY 158
Query: 195 HGNAAGTM--GATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD-GEMYAKDVQDLIDFGT 251
HG+ G + GA + ++ + P YR +G D E+ K +++L +
Sbjct: 159 HGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLK 218
Query: 252 SGH--VAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308
H +A + E +QG GG+I + GYL + K L I DEV GF RTG F
Sbjct: 219 EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF- 277
Query: 309 GFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL-----TRRNYF--NTFGGNPVC 360
E V PDI+T KG+ G +P+ VTT EI ++ +F +++ GNP+
Sbjct: 278 ACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLG 337
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
A A L++ +K L Y+ +L L +GD+R G ++G+E V +++
Sbjct: 338 CAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKE 396
Query: 421 LKTPAKAET---LYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
K P + + + + +E+G+L GN PPL T ++ D ++ ++
Sbjct: 397 TKEPFEWTERVGVQVCKRSRELGMLTRP---LGNTIVFMPPLASTIDELDEMLRIL 449
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 181 bits (461), Expect = 1e-51
Identities = 127/434 (29%), Positives = 203/434 (46%), Gaps = 66/434 (15%)
Query: 77 HLYSKPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHS 134
H Y P+ VV K ++D G++YLD + V GHCHP ++ ++ Q +++ S
Sbjct: 52 HNYH-PIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLS 110
Query: 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCND 186
+ + N +FAE L + M G V+ N+G E E AI +AR +
Sbjct: 111 SRAFYNDKFPEFAEYL-TSMFGYDMVLPM-NTGAEGVETAIKLARKWGYEKKGIPKNEAI 168
Query: 187 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246
I+S +HG T+ A + S + + RG FG + K
Sbjct: 169 IVSCCGCFHGR---TLAAISMSC--------------DNEATRG-FGPLLPGHLK----- 205
Query: 247 IDFGTSG-----------HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295
+DFG +A FL E IQG G++ GYL AV + K L IADE
Sbjct: 206 VDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265
Query: 296 VQAGFARTGSHF---WGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYF 351
+Q G ARTG W V PD+V + K +G G IP+ AV+ ++ + +
Sbjct: 266 IQTGLARTGKMLACDW----EEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHG 321
Query: 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFL 410
+TFGGNP+ +A A L+V+Q +KL + +G L+++L ++ ++ +I +VRGRG L
Sbjct: 322 STFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLL 381
Query: 411 LGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD--- 467
V + P A + + K+KE G+L + + R+ PPL ++++
Sbjct: 382 NAVVL--NSPKLGPVSAYDVCL--KLKERGLLAKPT--HDTIIRLAPPLSISEDELQECS 435
Query: 468 -YLVDVMDYSLSKM 480
L DV+++ L K+
Sbjct: 436 KALSDVLEHDLPKL 449
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 178 bits (453), Expect = 6e-51
Identities = 119/420 (28%), Positives = 189/420 (45%), Gaps = 54/420 (12%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY--L 139
P+ +V + YL+ +GR +DA GH HPY+ +I Q+ R+ H V++
Sbjct: 25 PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH--VIFAGF 82
Query: 140 NH-AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRN 192
H A+ L + PG L VFF++SG+ A E+A+ MA Y G + +SLR
Sbjct: 83 THEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRG 142
Query: 193 AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVF----------GADGEMYAKD 242
YHG+ GTM +V G HAL Y + +
Sbjct: 143 GYHGDTIGTM----------SVGDRGGMHAL----YTPLLFEQVTAPFPPDGYEQATLDA 188
Query: 243 VQDLIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
++ L++ +G +A F+ E +QG GG++ P YL + + + G L I DE+ GF
Sbjct: 189 LEALLE-KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFG 247
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLT----RRNYFN--TF 354
RTG+ F E GV PDI+ ++KG+ G +PL A + T EI E + + + ++
Sbjct: 248 RTGTLF-ACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSY 306
Query: 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414
NP+ AA +A L + + + + + + L E L +D G + DVR G + VE
Sbjct: 307 TANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPG-VADVRVLGAIGAVE 365
Query: 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
+ + + E GVL+ GN + PP T E+ D + D +
Sbjct: 366 LDR-----PVLERDGPALRAFALERGVLLRP---LGNTIYLMPPYIITAEELDRITDAIV 417
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 177 bits (451), Expect = 9e-51
Identities = 127/388 (32%), Positives = 184/388 (47%), Gaps = 25/388 (6%)
Query: 93 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST---VLYLNH-AIADFAE 148
L D G Y+D GIA + GH HP +V ++ Q+++ H+ V Y ++ +A+
Sbjct: 34 LKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKIN 93
Query: 149 ALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTM---GAT 205
ALA + G K FFT +G EA E A+ +AR +TG +I+ +HG TM G
Sbjct: 94 ALAP-VSGQAKTAFFT-TGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKV 151
Query: 206 AQSNWKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSGHVAGFLS 260
A F V+H P G+ D ++ D++ + VA +
Sbjct: 152 APYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE-------AKQVAAIIF 204
Query: 261 ESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIV 320
E +QG GG + A+ + + G + IADEVQ+GFARTG F + + PD++
Sbjct: 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF-AMDHYADKPDLM 263
Query: 321 TMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNA 380
TMAK + G+PL VV I + T+ GNP+ AA HAVL +I K+ L A
Sbjct: 264 TMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERA 323
Query: 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMG 440
+ +G LK L K+ I VRG G ++ EF D Q P+ A I + G
Sbjct: 324 NQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEF-NDPQTGEPSAAIAQKIQQRALAQG 382
Query: 441 VLVGKGGFYGNVFRITPPLCFTKEDADY 468
+L+ G YGNV R PL T DA +
Sbjct: 383 LLLLTCGAYGNVIRFLYPL--TIPDAQF 408
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 177 bits (451), Expect = 2e-50
Identities = 131/412 (31%), Positives = 199/412 (48%), Gaps = 37/412 (8%)
Query: 88 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-----A 142
K L D +G + LDAF G+ V G+ +V++ Q++ + ++T + H A
Sbjct: 35 AKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYF--HFGSEPA 92
Query: 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC------NDIISLRNAYHG 196
I A LA + PG+L V+FT G++A + A+ R Y ISL YHG
Sbjct: 93 I-RLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHG 151
Query: 197 NAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGE-MYAKDVQDLID----F 249
+++ G TA + F++ H +P PYR G D + + A V L
Sbjct: 152 SSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL 211
Query: 250 GTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309
G +VA F E IQG GG+I G+L A+ ++ ++ G L +ADEV GF RTG F
Sbjct: 212 GAD-NVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-A 269
Query: 310 FEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL-------TRRNYFNTFGGNPVCT 361
EA GVVPD++T+AKG+ +G +P+GAV+ + + + + + T+ +PV
Sbjct: 270 CEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSA 329
Query: 362 AAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQL 421
A G VL++ + L N G L AL+ + ++GDVRGRG L +E V D+
Sbjct: 330 AVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRA-HPLVGDVRGRGLLGALELVADKAT 388
Query: 422 KTPAKAE---TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLV 470
KTP A I D+ G++ F V P LC T+ + D +
Sbjct: 389 KTPFDAALDPADRIFDRAYANGLVF--RAFGDGVLGFAPALCCTEGEFDLIF 438
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 173 bits (441), Expect = 2e-49
Identities = 123/419 (29%), Positives = 194/419 (46%), Gaps = 58/419 (13%)
Query: 81 KPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138
KPL+VV G+ +++D +G RYLD + V GHCHP ++ ++V Q R+ ++ +
Sbjct: 21 KPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAF 80
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY--------TGCNDIISL 190
N +A E LA+ + G+ KV+ NSG EA E AI R + G +II
Sbjct: 81 RNDQLAPLYEELAA-LTGSHKVLPM-NSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVC 138
Query: 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250
+ +HG +G + +PD G FG + + ++ FG
Sbjct: 139 ADNFHGRTLSIVGFST-----------------DPDARGG-FGP----FTPGFR-VVPFG 175
Query: 251 ---------TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
T VA FL E IQG G+I GY V + I DE+Q G
Sbjct: 176 DAEALEAAITPNTVA-FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLG 234
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFNTFGGNPVC 360
RTG E G+ D+ + K + G P+ AV++ E+ VL + +TFGGNP+
Sbjct: 235 RTGK-LLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLA 293
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
A A LKV+ ++ + NA +G+Y E L +++ I+ +VRGRG +L VE +
Sbjct: 294 CAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRS--NIVREVRGRGLMLAVELEPE-- 349
Query: 421 LKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
A+ + +KE G+L + + R+ PPL T+E D+ ++ + L+
Sbjct: 350 -AGGARQ----YCEALKERGLLAKDT--HDHTIRLAPPLVITREQVDWALEQIAKVLAH 401
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 171 bits (435), Expect = 1e-48
Identities = 122/418 (29%), Positives = 194/418 (46%), Gaps = 63/418 (15%)
Query: 82 PLNVVDGKMQ--YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139
PL +V + + ++ D G RY+D + V GH HP ++ ++ +Q ++ ++ +
Sbjct: 21 PLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFH 80
Query: 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT--------GCNDIISLR 191
+ + + E +A K+ G V+ N+G EA E AI AR + +II+
Sbjct: 81 SDQLGPWYEKVA-KLTGKDMVLPM-NTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACE 138
Query: 192 NAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGA--DGEMYAKDVQDLIDF 249
+HG TM A + S+ + RG FG G I +
Sbjct: 139 GNFHGR---TMAAVSLSS--------------EEEYKRG-FGPMLPG-------IKKIPY 173
Query: 250 G--------TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
G + + A FL E IQG GI G+L A + K+ L IADE+Q G
Sbjct: 174 GDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLG 233
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTTPEIAEVLTRRNYFNTFGGNPVC 360
RTG F + V PD+ + K +G G+ P+ V +I V T ++ +TFGGNP+
Sbjct: 234 RTGKLF-ACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLA 292
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQ 420
A A L+V++++KL + +G Y KE+L + + +I +VRGRG +GVE
Sbjct: 293 CAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNP--MIKEVRGRGLFIGVE------ 344
Query: 421 LKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
L PA+ + +KE G+L + + V R PPL TKE+ D+ + + LS
Sbjct: 345 LNEPARP----YCEALKEEGLLCKET--HETVIRFAPPLVITKEELDWAFEKIKAVLS 396
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 170 bits (433), Expect = 7e-48
Identities = 125/420 (29%), Positives = 188/420 (44%), Gaps = 42/420 (10%)
Query: 80 SKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYL 139
+ P +V + Y D +GR+ LD G+ GH P +V+++ Q + ++ +
Sbjct: 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQM 89
Query: 140 NHAIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRN 192
H +A + AE LA PG L VFFTNSG+E+ + A+ +A Y +I
Sbjct: 90 GHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRER 149
Query: 193 AYHG-NAAGT----MGATAQSNWK-FNVVQTGV-H--HALNPDPYRGVFG--ADGEMYAK 241
YHG G + N K F + GV H H L+ G G A
Sbjct: 150 GYHGVGFGGISVGGIVN----NRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELAD 205
Query: 242 DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
D++ L+ + +A + E + G G++ GYL + + K G L I DEV GF
Sbjct: 206 DLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFG 265
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTR---------RNYF 351
R G+ F E GV PDI+T AKG+ NG IP+GAV+ + EI + + Y
Sbjct: 266 RLGAAF-AAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGY- 323
Query: 352 NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLL 411
T+ +PV AAG A L + +++ L A + Y ++ + +LK +I D+R G +
Sbjct: 324 -TYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVI-DIRNIGLVA 381
Query: 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
G+E A K E G+LV G+ ++PPL K D LVD
Sbjct: 382 GIEL---APRPGAPGARGYEAFMKCFEKGLLVRYT---GDTIALSPPLIIEKAQIDELVD 435
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 161 bits (409), Expect = 9e-45
Identities = 117/414 (28%), Positives = 191/414 (46%), Gaps = 29/414 (7%)
Query: 79 YSKPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR--IQHS 134
Y + V K L+DE+G+ Y+D F G + GH +P + ++++ + I HS
Sbjct: 13 YCRSFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS 72
Query: 135 TVLYLNHAIADFAEALASKM--PGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISL 190
+ A +F E + P L KV F +GT A E A+ +AR TG ++++S
Sbjct: 73 LDMA-TEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSF 131
Query: 191 RNAYHGNAAGTMGATAQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDF 249
NA+HG G++ T F GV ++ PY G G D + + L++
Sbjct: 132 TNAFHGMTLGSLSVTGNR---FKRQGAGVPLSNVSRMPYDGYLGGDVD-TIAYFEKLLED 187
Query: 250 GTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307
+SG A + E++QG GGI + +L + K ++ L I D++QAG RTG F
Sbjct: 188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG-TF 246
Query: 308 WGFEAHGVVPDIVTMAKGI-GNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHA 366
+ FE G+ PDIV ++K I G G+PL + PE+ +V + TF GN + A
Sbjct: 247 FSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATA 305
Query: 367 VLKVI-QKDKLQNNAHVVGSYLKERLTALKDKYG-IIGDVRGRGFLLGVEFVTDRQLKTP 424
L+ D + ++ERL + +Y +I VRGRG + G+E
Sbjct: 306 ALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECG------DG 359
Query: 425 AKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
A I E G+++ G V ++ PPL +E +D+++ ++
Sbjct: 360 DLAG--KIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 162 bits (411), Expect = 1e-44
Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 30/412 (7%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P +V K Y +GRR LD G+ V GH P +V+++ Q + ++ + H
Sbjct: 29 PRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGH 88
Query: 142 AIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND------IISLRNAY 194
A + A +A PG L VFFTNSG+E+ + A+ +A Y +I Y
Sbjct: 89 PKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGY 148
Query: 195 HG-NAAGT-MGATAQSNWKFNVVQTGVHHALNP-DPYRGVFG----ADGEMYAKDVQDLI 247
HG G +G + F + GV H + D R F G A +++ L+
Sbjct: 149 HGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLV 208
Query: 248 DFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF 307
+ +A + E + G G++ GYL + + K G L I DEV GF R G+ F
Sbjct: 209 TLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF 268
Query: 308 WGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRR-----NYFN--TFGGNPV 359
+ GV PD++T AKG+ NG IP+GAV + EI + + +F+ T+ G+P+
Sbjct: 269 -AAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPL 327
Query: 360 CTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDR 419
AA A L + +++ L A + Y ++ L +L+D +I D+R G + VE R
Sbjct: 328 ACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHVI-DIRNLGLVGAVEL-APR 385
Query: 420 QLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
K +A +++ K E G+++ + G++ ++PPL + D L D
Sbjct: 386 DGKPGKRAYEVFL--KCFEKGLMI---RYTGDILALSPPLIIEEAQIDELFD 432
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 159 bits (405), Expect = 6e-44
Identities = 119/401 (29%), Positives = 187/401 (46%), Gaps = 51/401 (12%)
Query: 89 KMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR--IQHS----TVLYLNHA 142
K +L+DE+G+ Y+D F G + GH +P + ++++ ++R I H T A
Sbjct: 29 KGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTT-----A 83
Query: 143 IADFAEALASK--MPGNL--KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
+F E P L KV F +GT A E A+ +AR TG +I++ N +HG
Sbjct: 84 KREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMT 143
Query: 199 AGTMGATAQSNWKF----NVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG- 253
G++ T N V V PY G FG D + ++ L++ +SG
Sbjct: 144 LGSLAVTG--NSHKRQGAGVPLNNVTRM----PYDGYFGGDVD-TLAYLEKLLEDSSSGV 196
Query: 254 -HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312
A + E++QG GGI + +L + K +K L I D++QAG RTG+ F+ FE
Sbjct: 197 DLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT-FFSFER 255
Query: 313 HGVVPDIVTMAKGI-GNGIPLGAVVTTPEI-----AEVLTRRNYFNTF-GGNPVCTAAGH 365
G+ PDIVT++K I G G+P+ V+ PE+ E + TF G N A
Sbjct: 256 AGITPDIVTLSKSISGYGLPMALVLIKPELDVWKPGE------HNGTFRGNNLAFVTATA 309
Query: 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVTDRQLKTP 424
A+ + D + G ++ERL + KY G+ +VRGRG + G++F
Sbjct: 310 ALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDF------GDG 363
Query: 425 AKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKED 465
A I + E G+++ G V ++ PPL +E+
Sbjct: 364 ELAGK--IAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEE 402
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 153 bits (388), Expect = 5e-41
Identities = 124/426 (29%), Positives = 203/426 (47%), Gaps = 52/426 (12%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ--HSTVLYL 139
PL + + Y++D NG++YLDA G+ G P +V + Q+ ++ HS +
Sbjct: 72 PLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS---FW 128
Query: 140 NHAIA---DFAEAL-----ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC------N 185
N D A+ L A KM VFFTNSG+EAN+ + + Y
Sbjct: 129 NRTTKPSLDLAKELLEMFTARKMGK----VFFTNSGSEANDTQVKLVWYYNNALGRPNKK 184
Query: 186 DIISLRNAYHGN---AAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEM---- 238
I+ +YHG+ +A G A KF++ V H P +R F GE
Sbjct: 185 KFIARSKSYHGSTLISASLSGLPALHQ-KFDLPAPFVLHTDCPHYWR--FHLPGETEEEF 241
Query: 239 ---YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295
A ++++LI +A F++E + G GG+I Y + +KK L IADE
Sbjct: 242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADE 301
Query: 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL-TRRNYFNT 353
V F R G+ F G + + + PD+V++AK + + +P+GAV+ +PEI++V+ ++ N +
Sbjct: 302 VICAFGRLGTMF-GCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGS 360
Query: 354 FG------GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGR 407
F G+PV A LK+ ++ + + + + ++ + A IIG++RG
Sbjct: 361 FAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGS-PIIGEIRGT 419
Query: 408 GFLLGVEFVTDRQLKTPAKAE---TLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
G +LG EFV ++ P AE Y + K+ G+LV G+ ++PPL T E
Sbjct: 420 GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLV---RVAGDNIMMSPPLIITPE 476
Query: 465 DADYLV 470
+ D L+
Sbjct: 477 EVDELI 482
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 147 bits (374), Expect = 2e-39
Identities = 111/415 (26%), Positives = 182/415 (43%), Gaps = 37/415 (8%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P+ + GK YL D +G Y+D G + GH HP VV+++ Q++R
Sbjct: 36 PIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER---GLSFGAPT 92
Query: 142 AIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAG 200
+ + AE L ++P +++ V F NSGTEA AI +AR YTG + II YHG++
Sbjct: 93 ELEVELAELLIERVP-SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDS 151
Query: 201 TM-GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLID-FGTSGH-VAG 257
+ A + + + GV + + D++ L + F G +A
Sbjct: 152 LLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN--------DLEALEEAFEEYGDDIAA 203
Query: 258 FLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF--ARTGSHFWGFEAHGV 315
+ E + G G++ PG+L + + ++ G L I DEV GF A G+ +GV
Sbjct: 204 VIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGA----QGYYGV 259
Query: 316 VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF---NTFGGNPVCTAAGHAVLKVIQ 372
PD+ T+ K IG G+P+GA EI E L T GNP+ AAG A L+ +
Sbjct: 260 EPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELM 319
Query: 373 KDKLQNNAHVV--GSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD--RQLKTPAKAE 428
++ + G L E L A +++GI V G + G+ F + R +++
Sbjct: 320 TEE-GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSD 378
Query: 429 TLYIMDKMKEM---GVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSKM 480
+ GV + F ++ T+ED D ++ D + ++
Sbjct: 379 VERFAKFFHHLLNRGVYLAPSQFEAGF--LSTAH--TEEDIDRTLEAADEAFKEL 429
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 142 bits (359), Expect = 2e-37
Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 34/364 (9%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY--L 139
P +V G+ +L+D +G+RYLD G+ G+ + + Q++++ + + +
Sbjct: 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTT 96
Query: 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNA 193
+ A+ + +E L S +PG+ +TNSG+EANE+ I R Y +I N
Sbjct: 97 HPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNG 156
Query: 194 YHGNAAGTMGATAQSNWKFNVVQTGVHHALNPD------PYRGVFGAD------GEMYAK 241
YHG+ T+ ATA KF G L PD PY G + G A
Sbjct: 157 YHGS---TLAATALGGMKFMHEMGG----LIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209
Query: 242 DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
+++ I + +VAGF++E QG GG+I Y P + + ++ L ADEV GF
Sbjct: 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFG 269
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN----YFNTFGG 356
RTG F E G PD +++AKG+ +G +P+G +V + IAE L + + T+ G
Sbjct: 270 RTGEWF-AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSG 328
Query: 357 NPVCTAAGHAVLKVIQKDKLQNNAHV-VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415
+PV A A LK ++ + + G YL+ L + + ++G+V+G G + ++F
Sbjct: 329 HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQF 388
Query: 416 VTDR 419
D+
Sbjct: 389 AEDK 392
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 139 bits (351), Expect = 3e-36
Identities = 113/412 (27%), Positives = 184/412 (44%), Gaps = 33/412 (8%)
Query: 88 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADF 146
G+ +L D G+RYLDA GH +P + I +Q+ +++H + +H + +
Sbjct: 36 GEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIEL 95
Query: 147 AEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHGNAAG 200
+E L P L F+ ++G+ A E+A+ M+ Y ++L N+YHG
Sbjct: 96 SERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLA 155
Query: 201 TM--GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE-----MYAKDVQDLIDFGTSG 253
M G A + + +PD Y G E M+A Q L +
Sbjct: 156 AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDE- 214
Query: 254 HVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA 312
+A + E IQG GG+ P YL + ++ + G I DE+ GF RTG+ F E
Sbjct: 215 -IAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQ 272
Query: 313 HGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL-----TRRNYF--NTFGGNPVCTAAG 364
G+ PD + ++K + G +PL AV+TT + + T R + +++ GNP+ AA
Sbjct: 273 AGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAA 332
Query: 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP 424
A L + ++D + N + + E L D + + +VR G +L +E V D+ KTP
Sbjct: 333 LATLDIFEQDNVIENNRALARRMAEATAHLAD-HPHVAEVRQTGMILAIEMVQDKASKTP 391
Query: 425 ---AKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
+ L + E G L+ G+V PP T E D+L +V
Sbjct: 392 YPWQERRGLKVYQHALERGALLRP---LGSVVYFLPPYVITPEQIDFLAEVA 440
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 131 bits (331), Expect = 1e-33
Identities = 104/359 (28%), Positives = 157/359 (43%), Gaps = 55/359 (15%)
Query: 81 KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR-------IQH 133
P V GK YL+D +G Y+D + GH HP VV+++ ++R +
Sbjct: 30 TPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEA 89
Query: 134 STVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNA 193
+L A+ + S++P +++V F NSGTEA A+ +AR YTG + II
Sbjct: 90 EILL---------AKEIISRVPS-VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGC 139
Query: 194 YHGNA------AGTMGATAQSNWKFNVVQTGVHHALNPD----PYRGVFGADGEMYAKDV 243
YHG+ AG+ AT GV PY D+
Sbjct: 140 YHGHHDALLVKAGSGAATL-----GLPTSPGVPEDFAKLTLVLPY------------NDL 182
Query: 244 QDLID-FGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF- 300
+ L + F G +AG + E + G G++ P +L + ++ G L I DEV GF
Sbjct: 183 EALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFR 242
Query: 301 -ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR-NYFN--TFGG 356
A G+ E GV PD+ T+ K IG G+P+GA EI E L + T G
Sbjct: 243 VALGGAQ----EYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSG 298
Query: 357 NPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415
NP+ AAG A LK++ ++ + + L E L+ + + GI V G + + F
Sbjct: 299 NPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFF 357
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 127 bits (321), Expect = 3e-32
Identities = 108/340 (31%), Positives = 154/340 (45%), Gaps = 49/340 (14%)
Query: 82 PLNVVDGKMQYLFDENGRRYLD---AFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLY 138
P+ + GK Y +D +G +Y+D A+G I T GH HP+ I I + VLY
Sbjct: 36 PVVMERGKGAYFYDVDGNKYIDYLAAYGPIIT---GHAHPH----ITKAITEAAENGVLY 88
Query: 139 ---LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195
I +FA+ L +P +L+ V F NSGTEA I +AR YTG II YH
Sbjct: 89 GTPTELEI-EFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYH 146
Query: 196 GN------AAG----TMGATAQSNWKFNVVQTGVHHALN-PDPYRGVFGADGEMYAKDVQ 244
G+ AAG T+G + ++ Q + N + + G+
Sbjct: 147 GHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD------- 199
Query: 245 DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304
VA L E I G GI+E PG+L AV + +AG L I DEV F
Sbjct: 200 ---------EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR--- 247
Query: 305 SHFWGFEAH-GVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV---LTRRNYFNTFGGNPVC 360
+ G + GV PD+ + K IG G+P+GA +I E L T GNP
Sbjct: 248 FMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPAS 307
Query: 361 TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI 400
AAG A L+V+Q++ + +G+ L+E + +K+GI
Sbjct: 308 MAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGI 347
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 126 bits (317), Expect = 1e-31
Identities = 113/432 (26%), Positives = 180/432 (41%), Gaps = 34/432 (7%)
Query: 77 HLYSKPL-NVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHST 135
H ++ PL + G+ +L +GRRYLDA T GH P + +I Q ++
Sbjct: 41 HPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVM 100
Query: 136 VLYLNHAIA-DFAE---ALASKMPGN--LKVVFFTNSGTEANELAIMMARLYTGCND--- 186
+ H A AE A+A + G L VF+ ++G+ E+A+ MA Y
Sbjct: 101 LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHR 160
Query: 187 ---IISLRNAYHGNAAGTM--GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK 241
I+L N YHG G + G + + A +PD Y G E YA
Sbjct: 161 RTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYAL 220
Query: 242 D----VQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297
+Q L + A L +Q GG+ P YL + G IADE+
Sbjct: 221 QAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIA 280
Query: 298 AGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL---TRRNYF-- 351
GF RTG+ F E GV+PD++ ++KG+ G +PL AV+ T ++ + +R F
Sbjct: 281 TGFGRTGTLF-ACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLH 339
Query: 352 -NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFL 410
+++ GNP+ AA A L + D + + + + L A ++ + DVR G +
Sbjct: 340 SHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQ-LAAQIGEHPHVADVRQAGMV 398
Query: 411 LGVEFVTDRQLKTPAKAET---LYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
+ E +TP L+ GV++ G+V PP C +
Sbjct: 399 VAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP---LGDVLYWMPPYCVDEAQLA 455
Query: 468 YLVDVMDYSLSK 479
L D +++ +
Sbjct: 456 LLADTTRHAIDE 467
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 119 bits (299), Expect = 2e-29
Identities = 104/396 (26%), Positives = 164/396 (41%), Gaps = 40/396 (10%)
Query: 92 YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA-DFAEAL 150
+L E+G +DA + GH HP + + QI + H L H A L
Sbjct: 33 FLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKL 92
Query: 151 ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC------NDIISLRNAYHGNAAGTMGA 204
+ L VF+++SG+ + E+AI MA Y+ +++ R+ YHG+ M
Sbjct: 93 LNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSV 152
Query: 205 T-----AQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259
S WK + + A P P RG + Y + ++ LID VA +
Sbjct: 153 CDPEGGMHSLWKGTLPEQIF--APAP-PVRGSSPQEISEYLRSLELLID----ETVAAII 205
Query: 260 SESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD 318
E I QG GG+ + V K L IADE+ GF RTG F A GV PD
Sbjct: 206 IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPD 264
Query: 319 IVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN------YFNTFGGNPVCTAAGHAVLKVI 371
I+ + K + G + A + T ++A++++ N + TF NP+ A HA L++I
Sbjct: 265 IMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEII 324
Query: 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLY 431
+ + + + L L+ L G + DVR G + VE ++ +A
Sbjct: 325 ETGMWRKQVKRIEAELIAGLSPLAHLPG-VADVRVLGAIGVVEMEQPVDMEEATQAAV-- 381
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDAD 467
+ GV + +G + + PP T E
Sbjct: 382 ------DHGVWLRP---FGRLVYVMPPYITTSEQIA 408
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 115 bits (290), Expect = 5e-28
Identities = 106/359 (29%), Positives = 156/359 (43%), Gaps = 54/359 (15%)
Query: 92 YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR-------IQHSTVLYLNHAIA 144
YL+D +G Y+D G + GH HP VV++++ ++ + L
Sbjct: 43 YLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVEL------- 95
Query: 145 DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGA 204
AE + +P ++++V NSGTEA AI +AR YTG + II YHG+A +
Sbjct: 96 --AELVIELVP-SIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLL-V 151
Query: 205 TAQSNWKFNVVQTGVHHALNPD-PYRGVFGADGEMYAKD-----------VQDLID-FGT 251
A S G PD P GV +AK V++L + +G
Sbjct: 152 KAGS---------GAATLGLPDSP--GVPED----FAKHTLTAPYNDLEAVEELFEEYG- 195
Query: 252 SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311
+A + E + G G++ PG+L + + + G L I DEV GF R
Sbjct: 196 -DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGA-QG 252
Query: 312 AHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR-NYFN--TFGGNPVCTAAGHAVL 368
+GV PD+ T+ K IG G+P+GA EI E L + T GNP+ AAG A L
Sbjct: 253 YYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 312
Query: 369 KVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKA 427
K++++ + L E L K GI V G + G+ F TD + A A
Sbjct: 313 KLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGL-FFTDEPVTNYADA 370
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 114 bits (288), Expect = 1e-27
Identities = 117/446 (26%), Positives = 173/446 (38%), Gaps = 97/446 (21%)
Query: 92 YLFDEN-GRRYLDAFGGIATVCCGHCHPYVVDS----------IVNQIKRIQHSTVLYLN 140
YL D GRRYLD F A+ G HP + D +N+ TV
Sbjct: 37 YLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEM-- 94
Query: 141 HAIADFAEALAS-KMPGNLKVVFFTNSGTEANELAIMMA-------RLYTGCND-----I 187
A F + A L +FF + G A E A+ +A G + +
Sbjct: 95 ---ARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKV 151
Query: 188 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP----YRGVFG---------- 233
+ LR A+HG + T+ T N DP F
Sbjct: 152 LHLRGAFHGRSGYTLSLT------------------NTDPRKTARFPKFDWPRIDNPKLR 193
Query: 234 ------ADGEMYAKDVQDLID----FGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYK 282
E+ A + + L F H +A F++E IQG GG P + A+ +
Sbjct: 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRE 253
Query: 283 SIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIA 342
+ L I DEVQ G TG+ W ++ GV PDIV K + ++ +
Sbjct: 254 LCDEHDALLIFDEVQTGVGLTGT-AWAYQQLGVRPDIVAFGKKT----QVCGIMAGRRVD 308
Query: 343 EVLTRRNYF-------NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALK 395
EV N F +T+GGN V +L+VI++D L NA G YL RL L
Sbjct: 309 EV--EDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELA 366
Query: 396 DKY-GIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFR 454
++ ++ +VRGRG + + P A+ ++ ++ E GVLV G FR
Sbjct: 367 AEFPAVVSNVRGRGLMCAFDL--------PTTADRDEVIRRLWEEGVLVLPCGERSIRFR 418
Query: 455 ITPPLCFTKEDADYLVDVMDYSLSKM 480
P L T E+ D +D + +L ++
Sbjct: 419 --PALTVTTEEIDAAIDALRRALPEV 442
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 111 bits (279), Expect = 1e-26
Identities = 113/421 (26%), Positives = 177/421 (42%), Gaps = 59/421 (14%)
Query: 92 YLFDEN-GRRYLDAFGGIATVCCGHCHPYVVDSIVNQ-------IKRIQHSTVLYLNHAI 143
L D GRRYLD F A++ G HP +VD + + + + +S V A+
Sbjct: 30 VLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVY--TVAM 87
Query: 144 ADFAEALAS-KMPGNLKVVFFTNSGTEANELAIMMA------------RLYTGCNDIISL 190
A F + A L +FF G A E A+ A ++ L
Sbjct: 88 ARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHL 147
Query: 191 RNAYHGNAAGTMGATAQS----------NWKFNVVQTGVHHALNPDPYRGVFGADGEMYA 240
R A+HG + T+ T +W + + L+ V + E
Sbjct: 148 RQAFHGRSGYTLSLTNTDPRKTARFPKFDWP-RIDNPKLTFPLDAPNLDQVIALEEEALR 206
Query: 241 KDVQDLIDFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAG 299
Q F H +A F++E IQG GG P +L A+ + L I DEVQ G
Sbjct: 207 ---QARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTG 263
Query: 300 FARTGSHFWGFEAHGVVPDIVTMAK-----GIGNGIPLGAVVTTPEIAEVLTRRNYFNTF 354
TG+ W ++ GV PDIV K GI G + V + V +R N +T+
Sbjct: 264 VGLTGT-AWAYQQLGVQPDIVAFGKKTQVCGIMAGRRVDEVAD--NVFAVPSRLN--STW 318
Query: 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGV 413
GGN V +L++I++++L +NA V G++L RL L ++ ++ + RGRG +
Sbjct: 319 GGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAF 378
Query: 414 EFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
+ P+ A+ ++ ++ GVL+ G FR PPL T+E+ D +D +
Sbjct: 379 DL--------PSTADRDEVIRQLYREGVLLLGCGERSIRFR--PPLTVTREEIDAAIDAI 428
Query: 474 D 474
Sbjct: 429 R 429
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 109 bits (275), Expect = 5e-26
Identities = 106/414 (25%), Positives = 177/414 (42%), Gaps = 36/414 (8%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
L V G+ +L+D +GRRYLDA GH +P + ++ +Q+ ++H+ + H
Sbjct: 37 LLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTH 96
Query: 142 AIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMA------RLYTGCNDIISLRNAY 194
A + AE LA+ G L FF + G A E+A+ M+ R + + L N Y
Sbjct: 97 EPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGY 156
Query: 195 HGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAK-------DVQD 245
HG G +G T + +K ++ + H +PD RG GE A DV+
Sbjct: 157 HGETIGALGVTDVALFKDAYDPLIRHAHVVASPDA-RG--ARPGETAADVAARALADVRR 213
Query: 246 LIDFGTSGHVAGFLSES-IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTG 304
L +G +A + E +Q G+ P YL + + G IADE+ G RTG
Sbjct: 214 LFA-ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG 272
Query: 305 SHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVL----TRRNYF--NTFGGN 357
+ F+ E GV PD + ++KGI G +PL V++ I R + +++ GN
Sbjct: 273 T-FFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGN 331
Query: 358 PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417
P+ A A L + +D + + L+ L L + + +R RG + +
Sbjct: 332 PLACRAALATLDLFAEDDVLARNARKSARLRAALAPL-AAHPQVRHLRQRGTIFAFDVAL 390
Query: 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVD 471
D A+ + + E +L+ G + PP ++ +L +
Sbjct: 391 DGD---AARTFSRRFFEAALERELLLRP---IGTTVYLMPPYVLDDDEIAWLAE 438
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 106 bits (267), Expect = 5e-25
Identities = 96/333 (28%), Positives = 150/333 (45%), Gaps = 27/333 (8%)
Query: 92 YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIA-DFAEAL 150
L +GRR +D G+ HP + ++ +QI + H + H A + L
Sbjct: 36 ELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKL 95
Query: 151 ASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-----NDIISLRNAYHGNAAGTMGAT 205
+ P L+ VF +SG+ A E+A+ MA Y ++LR+ YHG+ G M
Sbjct: 96 VAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVC 155
Query: 206 AQSNWKFNVVQTGV-HHALNPDPYRGVFGADGEMYAKDVQDLIDFGT-----SGHVAGFL 259
N ++ + + + P P DGE D +D+ F +A +
Sbjct: 156 DPDNSMHSLYKGYLPENLFAPAPQSRF---DGEW---DERDIAPFARLMAAHRHEIAAVI 209
Query: 260 SESI-QGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD 318
E I QG GG+ P +L V K + G L IADE+ GF RTG F E G+ PD
Sbjct: 210 LEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPD 268
Query: 319 IVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN-----YFNTFGGNPVCTAAGHAVLKVIQ 372
I+ + K + G + L A +TT E+AE ++ + TF GNP+ A +A L +++
Sbjct: 269 ILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLE 328
Query: 373 KDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR 405
Q + + L+E L L+D ++ DVR
Sbjct: 329 SGDWQQQVAAIEAQLREELAPLRD-APMVADVR 360
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 100 bits (250), Expect = 8e-23
Identities = 111/429 (25%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 75 LFHLYSK-----PLNVV---DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVN 126
++H YS P+ V DG M L ++GRR +D G+ HP + + N
Sbjct: 14 IWHPYSSVTDPIPVYPVERADGVMITL--KDGRRLIDGMSSWWAALHGYNHPRLNAAATN 71
Query: 127 QIKRIQHSTVLYLNHAIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---- 181
Q+ ++ H H A + A+ L +P +L +FF +SG+ A E+A+ MA Y
Sbjct: 72 QLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAK 131
Query: 182 --TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALN---------PDPYRG 230
++R+ YHG+ M TG+H N P P
Sbjct: 132 GEVQRTKFATIRSGYHGDTWHAMSVCDPV--------TGMHGLFNHSLPVQYFLPQPSIK 183
Query: 231 VFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGL 290
+ + +QDL++ A L +QG GG+ +P YL + + G L
Sbjct: 184 FGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVL 243
Query: 291 CIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRN 349
I DE+ GF RTG F E GVVPDI+ + K + G + L A +TT IA+ +
Sbjct: 244 LIFDEIATGFGRTGKLF-ALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGE 302
Query: 350 -----YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDV 404
+ TF NP+ A ++++ + Q N + + LK+ L ++ + +V
Sbjct: 303 AKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAA-EFDSVAEV 361
Query: 405 RGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
R G + VE +K P TL + E G+ V +G + I PP + +
Sbjct: 362 RVLGAIGVVE------MKEPVNMATL--QPRFVEHGIWVRP---FGKLVYIMPPFIISPD 410
Query: 465 DADYLVDVM 473
+ L +
Sbjct: 411 ELSQLTSGL 419
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 96.4 bits (240), Expect = 2e-21
Identities = 111/480 (23%), Positives = 187/480 (38%), Gaps = 69/480 (14%)
Query: 47 PFDYSPPPYD----GPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYL 102
P + + P GP + + + H + + YL D +G R L
Sbjct: 5 PNEPTGPLMKTEIPGPKSKAAMKQLNEVFDARAVHF---LADYEKSRGNYLVDVDGNRLL 61
Query: 103 DAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAI-----ADFAEALASKM--- 154
D + I+++ G+ +P +++ + + +T L A+ D+A+ L +
Sbjct: 62 DLYSQISSIPIGYNNP----ALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKV 117
Query: 155 -PGNLKVVFFTNSGTEANELAIMMARLY-------------------------TGCND-- 186
P V+ SG++ANELA A +Y G D
Sbjct: 118 APKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177
Query: 187 IISLRNAYHGNAAGTMGAT-AQSNWKFNVVQTGVHHALNPD---PYRGVFGADGEMYAKD 242
I+S + A+HG G++ T ++ K ++ A P P + + +
Sbjct: 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRC 237
Query: 243 VQDLIDFGTSGH--VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF 300
++++ D H VA + E IQ GG +P + + KK I DEVQ G
Sbjct: 238 LEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGV 297
Query: 301 ARTGSHFWGFEAHGV--VPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNP 358
TG FW E + PD+VT +K G P R FNT+ G+P
Sbjct: 298 GATGK-FWAHEHWNLDDPPDMVTFSKKFQTA---GYFFHDPAFRPNKPYR-QFNTWMGDP 352
Query: 359 VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVT 417
+++ I++ L N VG YL L L+ KY I ++RG+G + +
Sbjct: 353 SRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAW-- 410
Query: 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSL 477
TP +A+ ++ K + GV +G G R+ P L F K AD ++++ +
Sbjct: 411 ----DTPDEAKRDKLLKKARNNGVNIGGCGV--KAIRLRPMLVFQKHHADIFLEIISKII 464
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 92.6 bits (230), Expect = 3e-20
Identities = 84/296 (28%), Positives = 129/296 (43%), Gaps = 26/296 (8%)
Query: 95 DENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM 154
D G+ ++D G ++ GH HP + D+I +R S L I FAE L S +
Sbjct: 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER-GTSYGLTSEQEIL-FAEELFSYL 106
Query: 155 PGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 214
+ F +SGTEA A+ +AR TG + II YHG+A + + S
Sbjct: 107 GLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSE---TS 163
Query: 215 VQTGVHHALNPDPYRG---VFGADGEMYAKDVQDLIDFGTSGH-VAGFLSESIQGVGGII 270
+ T + H ++ D + + V + + GH VAG + E I G++
Sbjct: 164 LDT-LTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL-----GHRVAGVIFEPICANMGVV 217
Query: 271 ELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEA-HGVVPDIVTMAKGIGNG 329
PG++ + ++ ++ G L I DEV GF R G A + V PDI K +G G
Sbjct: 218 LPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVA--QGGAAAIYHVKPDITVYGKILGGG 274
Query: 330 IPLGAVVTTPEIAEVLTRRNYF---NTFGGNPVCTAAGHAVLKVIQK----DKLQN 378
+P AVV I + L T GNP+ AAG A + + ++ +L
Sbjct: 275 LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLST 330
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 88.3 bits (219), Expect = 9e-19
Identities = 84/298 (28%), Positives = 129/298 (43%), Gaps = 31/298 (10%)
Query: 89 KMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKR-IQHSTVLYLNHAIADFA 147
K Y +D +G Y+D G GH V+ ++ +K+ L + +A
Sbjct: 89 KGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLA--- 145
Query: 148 EALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA------AGT 201
E + +P ++++V F NSGTEA + +AR YTG II YHG+A AG+
Sbjct: 146 EMVIDAVP-SVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGS 204
Query: 202 MGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSE 261
AT V + L PY + A +++ + G +A + E
Sbjct: 205 GVATLGLPDSPGVPKAATSATLTA-PYNDL-EAVKKLFEAN---------KGEIAAVILE 253
Query: 262 SIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGF--ARTGSHFWGFEAHGVVPDI 319
+ G G I +L + + K+ G L + DEV GF A G+ E G+ PD+
Sbjct: 254 PVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQ----EYFGITPDL 309
Query: 320 VTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF---NTFGGNPVCTAAGHAVLKVIQKD 374
T+ K IG G+P+GA EI E++ T GNP+ AG LK +Q+
Sbjct: 310 TTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQP 367
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 67.8 bits (166), Expect = 3e-12
Identities = 88/400 (22%), Positives = 150/400 (37%), Gaps = 73/400 (18%)
Query: 77 HLYSK-----PLN----VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQ 127
H Y+K P + G +++D +G Y++ G+ V GH +P VV+++
Sbjct: 17 HTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREA 76
Query: 128 IKR---IQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG- 183
++ + + L D AE+ + G +V F +G++A A+ +AR YTG
Sbjct: 77 LQDGCNFTRPSAIEL-----DAAESFLELIDG-ADMVKFCKNGSDATSAAVRLARAYTGR 130
Query: 184 -----CND--IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG 236
C D S + + G + G A +V V N
Sbjct: 131 DLVARCADHPFFSTDDWFIGTTPMSAGIPA------SVSALTVTFRYN------------ 172
Query: 237 EMYAKDVQDLIDFGTS--GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD 294
D+ L G +A + E E G+L V + + G L I D
Sbjct: 173 -----DIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILD 223
Query: 295 EVQAGF---ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEV--LTR-- 347
E+ GF R +G +VPD+ K +GNG + A+ E E+ L
Sbjct: 224 EMITGFRWHMRGAQKLYG-----IVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTD 278
Query: 348 --RNYF--NTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGD 403
R + T G AA A + + + + + H G+ L + ++G+
Sbjct: 279 RERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDH 338
Query: 404 VRGRGFLLGVEFVT-DRQLKTPAKAETLYIMDKMKEMGVL 442
VR G + + T D + TL++ + ++ GVL
Sbjct: 339 VRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVL 377
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 59.0 bits (143), Expect = 3e-09
Identities = 65/287 (22%), Positives = 101/287 (35%), Gaps = 93/287 (32%)
Query: 161 VFFTNSGTEANELAIMMA-RLYTGCND--------------------IISLRNAYHGNAA 199
VFF+++G+ A E+A+ MA R + D +++L +YHG+
Sbjct: 430 VFFSDNGSTAIEVALKMAFRKF--IVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTL 487
Query: 200 GTMGATA--------QSNW------------------KFNVVQTGVHHALNPDPYRG--- 230
G M A A Q W ++N+ +
Sbjct: 488 GAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWES 547
Query: 231 ---VFGA--DGEMYAKDVQDLID--------FGTSGHVAGFLSES-IQGVGGIIELAPGY 276
VF D AK + I+ +GH+A + E + G GG++ + P +
Sbjct: 548 RDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLF 607
Query: 277 LPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAV 335
A+ + + I DEV G R G +E G PDI AK + G+ PL A
Sbjct: 608 QRALVQVCRSRKIPVIFDEVFTGLWRLG-VESAWELLGCKPDIACYAKLLTGGLVPLAAT 666
Query: 336 VTTPEIAEVLTRRNYFNTFGG---------------NPV-CTAAGHA 366
+ T E+ F F G +P+ C AA A
Sbjct: 667 LATEEV---------FEAFRGPSKLDALLHGHSYTAHPMGCAAAAKA 704
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the substrate in four
kinds of reactions (1) transamination (movement of amino
groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
Structure and sequence analysis has revealed that the
PLP dependent enzymes can be classified into four major
groups of different evolutionary origin: aspartate
aminotransferase superfamily (fold type I), tryptophan
synthase beta superfamily (fold type II), alanine
racemase superfamily (fold type III), and D-amino acid
superfamily (fold type IV) and Glycogen phophorylase
family (fold type V).
Length = 170
Score = 55.5 bits (134), Expect = 4e-09
Identities = 44/197 (22%), Positives = 64/197 (32%), Gaps = 31/197 (15%)
Query: 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTM 202
+ + E LA + F SGT ANE A++ +++I N +
Sbjct: 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSR----- 54
Query: 203 GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSES 262
W P P D DV L + +VA +
Sbjct: 55 ------YWV-----AAELAGAKPVPVP---VDDAGYGGLDVAILEELKAKPNVALIVITP 100
Query: 263 IQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTM 322
GG+ L P L + K K+ G L + D AG A E D+VT
Sbjct: 101 NTTSGGV--LVP--LKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGG---ADVVTF 153
Query: 323 A--KGIGNGIPLGAVVT 337
+ K +G G G V+
Sbjct: 154 SLHKNLG-GEGGGVVIV 169
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 51.9 bits (125), Expect = 4e-07
Identities = 65/274 (23%), Positives = 98/274 (35%), Gaps = 39/274 (14%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
PL V + + D +G RY D G GH V ++ Q +R T + +
Sbjct: 58 PLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR--GLTTMLPSE 115
Query: 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201
A E LA + L + T+AN + AR TG I+ YHG
Sbjct: 116 DAAWVGEELARRF--GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDV 173
Query: 202 M-----GATAQSNWKFNVVQTGVHHALNPDPYRGV-FGADGEMYAKDVQDLIDFGTSGHV 255
G Q + ++ R V F D+ L G V
Sbjct: 174 FVDLVDGRPVQ---RPGLLGQVHDLTATT---RVVEF--------NDLAALEAALADGDV 219
Query: 256 AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ------AGFARTGSHFWG 309
A L+E G++ PG+ A+ + ++ G L + DE G+ R
Sbjct: 220 AAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTR------- 272
Query: 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAE 343
AHG+ PD + + K I G+P + E+AE
Sbjct: 273 --AHGLEPDFLVVGKPIAGGVPCAVYGFSAELAE 304
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 46.2 bits (110), Expect = 2e-05
Identities = 67/381 (17%), Positives = 114/381 (29%), Gaps = 67/381 (17%)
Query: 119 YVVDSIVNQIKRI--QHSTVLYLN-HAIADFAEALASKMPGNLKV-------VFFTNSGT 168
+ ++ K + LY + + EALA + + + V F +
Sbjct: 16 GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAG 75
Query: 169 EANELAIMMARLYTGCNDIISLRN-AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP 227
E I + RL G ++ + G
Sbjct: 76 ANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGE-------------------VVR 116
Query: 228 YRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKA 287
Y D + ++ + T G+ L S G + L + K+
Sbjct: 117 YPLYSSNDFHLDFDALEAALKEATEGNK-VVLHTSPHNPTGTV-ATLEELEKLLDLAKEH 174
Query: 288 GGLCIADEVQAGFARTGSHFWG---FEAHGVVPDIV--TMAKGIG-NGIPLGAVVTTPEI 341
L + DE AGF A G +V + +K G G +G ++ +
Sbjct: 175 NILLLVDEAYAGFVFGSLDAVATRALLAEG-PNLLVVGSFSKAFGLAGWRVGYILGNAAV 233
Query: 342 AEVLT---RRNYFNTFGGNPVCTAAGHAVLKVIQ-----KDKLQNNAHVVGSYLKERLTA 393
L R Y +T AA L V + +++ YL++ L A
Sbjct: 234 ISQLRKLARPFYSSTHLQ-AAAAAALSDPLLVASELEEMRQRIKERRD----YLRDGLEA 288
Query: 394 LKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNV- 452
+ GF L A A+ L +E+GV V G +G
Sbjct: 289 A-GLSVLPSQ---AGFFLLTGL---DPEAALALAQVLL-----EEVGVYVTPGSSFGGPG 336
Query: 453 -FRITPPLCFTKEDADYLVDV 472
RIT T+E+ + L++
Sbjct: 337 WLRITVAGG-TEEELEELLEA 356
>gnl|CDD|99747 cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS),
8-amino-7-oxononanoate synthase (AONS), and
2-amino-3-ketobutyrate CoA ligase (KBL). SPT is
responsible for the condensation of L-serine with
palmitoyl-CoA to produce 3-ketodihydrospingosine, the
reaction of the first step in sphingolipid biosynthesis.
ALAS is involved in heme biosynthesis; it catalyzes the
synthesis of 5-aminolevulinic acid from glycine and
succinyl-coenzyme A. AONS catalyses the decarboxylative
condensation of l-alanine and pimeloyl-CoA in the first
committed step of biotin biosynthesis. KBL catalyzes the
second reaction step of the metabolic degradation
pathway for threonine converting 2-amino-3-ketobutyrate,
to glycine and acetyl-CoA. The members of this CD are
widely found in all three forms of life.
Length = 349
Score = 42.9 bits (102), Expect = 2e-04
Identities = 58/223 (26%), Positives = 82/223 (36%), Gaps = 52/223 (23%)
Query: 277 LPAVYKSIKKAGGLCIADEVQA----GFARTGSHFWGFEAHGVVPDIV--TMAKGIGN-G 329
LP + KK G + DE + G G +G V DI+ T+ K G G
Sbjct: 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDV--DIIMGTLGKAFGAVG 208
Query: 330 IPLGAVVTTPEIAEVLTRRNYFNTF----GGNPVCTAAGHAVLKVIQKD-----KLQNNA 380
G + + E+ + L R+Y F P AA A L+V+Q +LQ N
Sbjct: 209 ---GYIAGSKELIDYL--RSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENV 263
Query: 381 HVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF---VTDRQLKTPAKAETLYIMDKMK 437
YL+ L L GF +G + PAKA D +
Sbjct: 264 ----RYLRRGLKEL-------------GFPVGGSPSHIIPPLIGDDPAKAVAFS--DALL 304
Query: 438 EMGVLVGKGGFYGNV------FRITPPLCFTKEDADYLVDVMD 474
E G+ V + Y V RI+ TKED D L++ +
Sbjct: 305 ERGIYV-QAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALK 346
>gnl|CDD|189558 pfam00464, SHMT, Serine hydroxymethyltransferase.
Length = 380
Score = 33.5 bits (77), Expect = 0.23
Identities = 39/141 (27%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 292 IADEVQAGFARTGSHFWGFEAHGVVP------DIVTMAKGIGNGIPLGAVVTTPEIAEVL 345
IADEV A +H G A GV+P +VT P G ++ EI L
Sbjct: 183 IADEVGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRGGMIFFREILYEL 242
Query: 346 TRRNYFNTF----GGNPVCTAAGHAV---------LKVIQKDKLQNNAHVVGSYLKERLT 392
++ F GG A AV KV Q+ ++ NA + LKER
Sbjct: 243 EKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQ-QVLKNAKALAEALKERGY 301
Query: 393 AL----KDKYGIIGDVRGRGF 409
L D + ++ D+R +G
Sbjct: 302 KLVSGGTDNHLVLVDLRPKGL 322
>gnl|CDD|177852 PLN02201, PLN02201, probable pectinesterase/pectinesterase
inhibitor.
Length = 520
Score = 32.9 bits (75), Expect = 0.39
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 250 GTSGHVAGFLSESIQGVGGII-ELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFW 308
GT+G V ++ S+ VG + EL P K K G + +G ++ S W
Sbjct: 133 GTNGIVKKLVAGSLSQVGSTVRELLTMVHPPPSKGKSKPIGGGTMTKKHSGSSKFPS--W 190
Query: 309 G-------FEAHGVVPDIVTMAKGIGN 328
+ +GV PD+V A G GN
Sbjct: 191 VKPEDRKLLQTNGVTPDVVVAADGTGN 217
>gnl|CDD|192756 pfam11422, IBP39, Initiator binding protein 39 kDa. IBP39
recognises the initiator which is solely responsible for
transcription start site selection. IBP39 contains an
N-terminal Inr binding domain connected to a C-terminal
domain. The C domain structure indicates that it
interacts with the T. vaginalis RNAP II large subunit
C-terminal domain. Binding of IBP39 to Inr recruits RNAP
II and initiates transcription.
Length = 181
Score = 31.6 bits (72), Expect = 0.48
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 76 FHLYSKPLNVVDGKMQYLFDENGRRY 101
F +Y+ PL + QYL DENG ++
Sbjct: 148 FKVYNLPL--ISSTGQYLVDENGEKF 171
>gnl|CDD|114648 pfam05937, EB1_binding, EB-1 Binding Domain. This region at the
C-terminus of the APC proteins binds the
microtubule-associating protein EB-1. At the C-terminus
of the alignment is also a pfam00595 binding domain. A
short motif in the middle of the region appears to be
found in the APC2 proteins.
Length = 174
Score = 30.6 bits (68), Expect = 0.99
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 10 LSETNSLRLPQRCFFSQLAQKEESSLSEHETFLPRMPPFDYSPPP 54
+ ETN + +R FS + + SS S T R+ PF+Y+P P
Sbjct: 79 VQETNENSIAERTAFSSSSSSKHSSPSG--TVAARVTPFNYNPSP 121
>gnl|CDD|215937 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogenase, NAD binding
domain.
Length = 183
Score = 30.5 bits (70), Expect = 1.0
Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
Query: 64 LAKRKTFLSPSLFHLY 79
LAKRK F P+L++LY
Sbjct: 9 LAKRKLF--PALYNLY 22
>gnl|CDD|226191 COG3665, COG3665, Uncharacterized conserved protein [Function
unknown].
Length = 264
Score = 30.5 bits (69), Expect = 1.7
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 11/89 (12%)
Query: 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHP 118
S D I A+R +L P L L S N+ + L DE+G DA C+P
Sbjct: 98 SGDTIDAQRNIYLLPGL-LLLS---NIGRDMLTLLIDEDGVGRHDA-------FGTACNP 146
Query: 119 YVVDSIVNQIKRIQHSTVLYLNHAIADFA 147
+ + H A+A +
Sbjct: 147 EINTLLYGPGTMGHHICASNFTVALAPYG 175
>gnl|CDD|222999 PHA03142, PHA03142, helicase-primase primase subunit BSLF1;
Provisional.
Length = 835
Score = 30.8 bits (70), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 23 FFSQLAQKEESSLSEHETFLPRMPPF 48
++S KE+ +S HE F PR+P F
Sbjct: 466 YYSLNTLKEQLLVSRHEYFNPRLPVF 491
>gnl|CDD|179511 PRK02948, PRK02948, cysteine desulfurase; Provisional.
Length = 381
Score = 30.5 bits (69), Expect = 2.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 148 EALASKMPGNLKVVFFTNSGTEANELAI 175
+ A + G + ++FT+ GTE+N LAI
Sbjct: 50 KTFAEMIGGEEQGIYFTSGGTESNYLAI 77
>gnl|CDD|223441 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate
transport and metabolism].
Length = 483
Score = 30.3 bits (69), Expect = 2.7
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Query: 57 GPSADEILAKRKTFLSPSLFHLYSK 81
G + D LA+RK F P+L+ LY +
Sbjct: 14 GATGD--LARRKLF--PALYRLYKE 34
>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional.
Length = 380
Score = 30.1 bits (68), Expect = 2.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 329 GIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370
G+ +GAVV TP++ EV+ N G N + A A LKV
Sbjct: 231 GLRIGAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKV 271
>gnl|CDD|223154 COG0076, GadB, Glutamate decarboxylase and related PLP-dependent
proteins [Amino acid transport and metabolism].
Length = 460
Score = 30.0 bits (68), Expect = 2.9
Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 19/78 (24%)
Query: 163 FTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT----MGATAQ-SNWKF----- 212
FT+ GTEAN LA++ AR A G G TA S K
Sbjct: 124 FTSGGTEANLLALLAAR-----ERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLG 178
Query: 213 ----NVVQTGVHHALNPD 226
V + ++ D
Sbjct: 179 LGLRRVPTVPTDYRIDVD 196
>gnl|CDD|224029 COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase
and related enzymes [Amino acid transport and
metabolism].
Length = 386
Score = 29.8 bits (68), Expect = 3.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 161 VFFTNSGTEANELAIM 176
+ FT+ TE+N LAI
Sbjct: 64 IIFTSGATESNNLAIK 79
>gnl|CDD|215496 PLN02918, PLN02918, pyridoxine (pyridoxamine) 5'-phosphate
oxidase.
Length = 544
Score = 29.5 bits (66), Expect = 4.6
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 41 FLPRMPPFDYSPPPYDGPSADEILAKRKTFLSPSLFHLYSKPL 83
L + P SPPP S + + FL+PS
Sbjct: 13 LLQSLLPLPISPPPPHSSSLSSSPSPTQRFLTPSQGSRLPPRR 55
>gnl|CDD|99748 cd06502, TA_like, Low-specificity threonine aldolase (TA). This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). TA
catalyzes the conversion of L-threonine or
L-allo-threonine to glycine and acetaldehyde in a
secondary glycine biosynthetic pathway.
Length = 338
Score = 29.2 bits (66), Expect = 4.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 147 AEALASKMPGNLKVVFFTNSGTEANELAIM 176
EA A+++ G F SGT AN+LA+
Sbjct: 37 LEARAAELFGKEAA-LFVPSGTAANQLALA 65
>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional.
Length = 239
Score = 28.4 bits (63), Expect = 6.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 213 NVVQTGVHHALNPDPYRGVFGA 234
+V+ G H P Y G FGA
Sbjct: 141 SVIFVGESHGETPKAYWGGFGA 162
>gnl|CDD|182295 PRK10191, PRK10191, putative acyl transferase; Provisional.
Length = 146
Score = 27.5 bits (61), Expect = 8.5
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 18/70 (25%)
Query: 326 IGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGS 385
IGNG+ LGA V + ++ GN V AG VL D + +NA VVG
Sbjct: 95 IGNGVELGANVII--LGDITI---------GNNVTVGAGSVVL-----DSVPDNALVVGE 138
Query: 386 YLKERLTALK 395
K R+ +K
Sbjct: 139 --KARVKVIK 146
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.321 0.138 0.416
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 25,383,691
Number of extensions: 2551194
Number of successful extensions: 2792
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2355
Number of HSP's successfully gapped: 130
Length of query: 480
Length of database: 10,937,602
Length adjustment: 101
Effective length of query: 379
Effective length of database: 6,457,848
Effective search space: 2447524392
Effective search space used: 2447524392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.4 bits)