RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 011669
(480 letters)
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 288 bits (737), Expect = 1e-93
Identities = 117/425 (27%), Positives = 196/425 (46%), Gaps = 6/425 (1%)
Query: 59 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHP 118
S E++ +R + + ++ P+ + ++D GR YLD GGIA + GH HP
Sbjct: 2 SNKELMQRRSQAIPRGVGQIH--PIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP 59
Query: 119 YVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMPGN-LKVVFFTNSGTEANELAIM 176
VV ++ Q+K++ H+ L + + E + K+PG+ K +G+EA E A+
Sbjct: 60 KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK 119
Query: 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSN-WKFNVVQTGVHHALNPDPYRGVFGAD 235
+AR T + I+ AYHG T+ T + N + + H P ++
Sbjct: 120 IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE 179
Query: 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295
+ A + + +A + E +QG GG +P ++ + + G + IADE
Sbjct: 180 DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE 239
Query: 296 VQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFG 355
VQ+G RT + E GV PD+ T AK I G PL V E+ + + T+
Sbjct: 240 VQSGAGRT-GTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYA 298
Query: 356 GNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF 415
GNP+ A VLKV +++ L A+ +G LK+ L A+ +K+ IGDVRG G ++ +E
Sbjct: 299 GNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIEL 358
Query: 416 VTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDY 475
D P T I+ + ++ G+++ G Y NV RI PL ++++
Sbjct: 359 FEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQ 418
Query: 476 SLSKM 480
+
Sbjct: 419 CFDEA 423
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 269 bits (688), Expect = 1e-86
Identities = 127/420 (30%), Positives = 197/420 (46%), Gaps = 38/420 (9%)
Query: 62 EILAKRKTFLSPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYV 120
+L KT S +Y+K L +V G+ ++D G Y+D GG GH +P V
Sbjct: 3 ALLEAEKTLDS----GVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEV 58
Query: 121 VDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARL 180
V+++ Q + + +F L + +P L VF NSGTEANE A+ AR
Sbjct: 59 VEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARA 118
Query: 181 YTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEM 238
+TG ++ + G G++ T + ++ F + V PY V
Sbjct: 119 HTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFI----PYNDV------- 167
Query: 239 YAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQA 298
+ ++ +D A + E +QG GG+ P +L A + ++ G L I DE+Q
Sbjct: 168 --EALKRAVD----EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT 221
Query: 299 GFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNP 358
G RTG F FE G+VPDI+T+AK +G G+PLG V E+A + + + TFGGNP
Sbjct: 222 GMGRTGKRFA-FEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNP 280
Query: 359 VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTD 418
+ AAG A ++ +++ +L A +G + E+L A+ I +VRG G ++G+E
Sbjct: 281 LAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPK--IREVRGMGLMVGLELKEK 338
Query: 419 RQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
YI KE VL + G V R PPL KED + +V+ + L+
Sbjct: 339 A---------APYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVLA 387
>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 404
Score = 264 bits (675), Expect = 1e-84
Identities = 104/425 (24%), Positives = 191/425 (44%), Gaps = 31/425 (7%)
Query: 58 PSADEILAKRKTFLSPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHC 116
P++D+I + + + H P+ + GK YL+D GR+Y D I+ V GHC
Sbjct: 3 PTSDDIFEREYKYGA----HNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHC 58
Query: 117 HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176
HP +V+++ +Q+ ++ ++ + N+ + ++ E N V N+G EA E A
Sbjct: 59 HPKIVNALKSQVDKLTLTSRAFYNNVLGEYEE--YITKLFNYHKVLPMNTGVEAGETACK 116
Query: 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG 236
+AR + I A + + + + + +P Y G
Sbjct: 117 LARKWGYTVKGIQKYKAKI---------VFAAGNFWGRTLSAISSSTDPTSYDGFGPFMP 167
Query: 237 EMYA---KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293
D+ L +VA F+ E IQG G++ PGYL V + + L IA
Sbjct: 168 GFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIA 227
Query: 294 DEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFN 352
DE+Q G ART + + V PDIV + K + G P+ AV+ +I + +F+
Sbjct: 228 DEIQTGLART-GRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFS 286
Query: 353 TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412
T+GGNP+ A L+V++++ L NA +G L+ L L ++ VRG+G L
Sbjct: 287 TYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSD--VVTAVRGKGLLNA 344
Query: 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDV 472
+ + + + ++++ G+L +G++ R PPL +++ +++
Sbjct: 345 IVIKETK------DWDAWKVCLRLRDNGLLA--KPTHGDIIRFAPPLVIKEDELRESIEI 396
Query: 473 MDYSL 477
++ ++
Sbjct: 397 INKTI 401
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 252 bits (644), Expect = 5e-80
Identities = 95/421 (22%), Positives = 177/421 (42%), Gaps = 24/421 (5%)
Query: 59 SADEILAKRKTFLSPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCH 117
+ ++ + + + H Y P+ + K +++D N +RY D ++V GHCH
Sbjct: 2 TPEDYINNELKYGA----HNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCH 57
Query: 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177
P ++++++NQ K + + + + + L + + + ++ T + +
Sbjct: 58 PNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCR 117
Query: 178 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGE 237
++ + + ++ + T + + +
Sbjct: 118 KW----GYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTS----NFGPFAPQFSK 169
Query: 238 MYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQ 297
+ D++ L + +V F+ E IQG G+I + YL VY KK L +ADEVQ
Sbjct: 170 VPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQ 229
Query: 298 AGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVVTTPEIAEVLTRRNYFNTFGG 356
G RT + V PD++ + K + G P+ AV+ +I V+ + +T+GG
Sbjct: 230 TGLGRT-GKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGG 288
Query: 357 NPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416
NP+ + L V+ +KL NA +G E L I+ DVRG+G L +EF
Sbjct: 289 NPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFK 348
Query: 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476
+ L I K+KE G++ + R+TPPLC TKE D +++ +
Sbjct: 349 NE-------LVNVLDICLKLKENGLIT--RDVHDKTIRLTPPLCITKEQLDECTEIIVKT 399
Query: 477 L 477
+
Sbjct: 400 V 400
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 235 bits (599), Expect = 5e-73
Identities = 97/436 (22%), Positives = 164/436 (37%), Gaps = 31/436 (7%)
Query: 61 DEILAKRKTFL-------SPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCC 113
DEI A + + + + +P+ K Y +D +G RY+D G C
Sbjct: 7 DEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAIC 66
Query: 114 GHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173
GH HP V++++ +++ A+ + + + ++++V F NSGTEA
Sbjct: 67 GHAHPEVIEALKVAMEKGTS---FGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMA 123
Query: 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQT-GVHHALNPDPYRGVF 232
+ + R YTG + II YHG+A + + + GV +
Sbjct: 124 VLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLT--- 180
Query: 233 GADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCI 292
+ V+ L G +AG + E I G G I G+L + + + L +
Sbjct: 181 --TPYNDLEAVKALFAEN-PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLV 237
Query: 293 ADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLT---RRN 349
DEV GF + E GV PD+ T+ K IG G+P+GA EI +++
Sbjct: 238 FDEVMTGFRIA--YGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMY 295
Query: 350 YFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGF 409
T GNP+ AG L+++++ + L + L A+ + G
Sbjct: 296 QAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSG 355
Query: 410 LLGVEFVTD-----RQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKE 464
+ G F K + M E G+ + F L T+E
Sbjct: 356 MFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE----AGFTSLAHTEE 411
Query: 465 DADYLVDVMDYSLSKM 480
D D + +S +
Sbjct: 412 DIDATLAAARTVMSAL 427
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 227 bits (578), Expect = 6e-70
Identities = 137/407 (33%), Positives = 203/407 (49%), Gaps = 10/407 (2%)
Query: 82 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH 141
P+ + K +++D +GR LD G + GHCHP +V I ++ H L+
Sbjct: 24 PMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSR 83
Query: 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGT 201
+ D A LA+ P L ++G E+NE AI MA+L TG +I+ ++HG
Sbjct: 84 PVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAA 143
Query: 202 MGATAQSN-WKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL----IDFGTSGHVA 256
AT + G P YR F +G D ID +SG++A
Sbjct: 144 ASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLA 203
Query: 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV 316
F++E I GGIIEL GY+ A+ + + G L I DE Q G RTG+ F GV
Sbjct: 204 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQR-DGVT 262
Query: 317 PDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYF--NTFGGNPVCTAAGHAVLKVIQKD 374
PDI+T++K +G G+PL A+VT+ I E Y T +P+ A G VL V+Q+D
Sbjct: 263 PDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD 322
Query: 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMD 434
L A+V+G L+ L L +++ IGDVRGRG LLGVE V DR+ K PA I
Sbjct: 323 GLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITR 382
Query: 435 KMKEMGVLVG--KGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
+ +G+ + + G VFRI PPL ++++ D + ++ ++ +
Sbjct: 383 ECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 429
>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}
Length = 461
Score = 195 bits (495), Expect = 2e-57
Identities = 86/477 (18%), Positives = 151/477 (31%), Gaps = 64/477 (13%)
Query: 48 FDYSPP----PYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLD 103
FDY P GP + E++ + + H N + + YL D +G R LD
Sbjct: 1 FDYDGPLMKTEVPGPRSRELMKQLNIIQNAEAVHF---FCNYEESRGNYLVDVDGNRMLD 57
Query: 104 AFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-----AIADFAEALASKMPGNL 158
+ I+++ G+ HP +V + L + E+L S P +
Sbjct: 58 LYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGM 117
Query: 159 KVVFFTNSGTEANELAIMMARLY--------------------------TGCNDIISLRN 192
+ G+ +NE A ++ I+S
Sbjct: 118 SQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMG 177
Query: 193 AYHGNAAGTMGATAQS-------NWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQD 245
A+HG G + T + + + + ++V+D
Sbjct: 178 AFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVED 237
Query: 246 LIDFGTSGH--VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEV-QAGFAR 302
LI VAG + E IQ GG + + + +K G + DEV G +
Sbjct: 238 LIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGST 297
Query: 303 TGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTA 362
D++T +K + G P + + +
Sbjct: 298 GKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEV 357
Query: 363 AGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY-GIIGDVRGRGFLLGVEFVTDRQL 421
I+++ L +NA G L L L+ +Y I VRGRG +
Sbjct: 358 INI-----IKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDT------ 406
Query: 422 KTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
P ++ ++ + GV++G G R P L F A +++ L+
Sbjct: 407 --PDESIRNKLISIARNKGVMLGGCG--DKSIRFRPTLVFRDHHAHLFLNIFSDILA 459
>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, BioA {Escherichia coli [TaxId: 562]}
Length = 429
Score = 189 bits (480), Expect = 1e-55
Identities = 96/421 (22%), Positives = 164/421 (38%), Gaps = 30/421 (7%)
Query: 75 LFHLYS------KPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI 128
+ H ++ VV + L +GRR +D G+ HP + ++ +QI
Sbjct: 13 ILHPFTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQI 72
Query: 129 KRIQHSTVLYLNHAIA-DFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT----- 182
+ H + HA A + L + P L+ VF +SG+ A E+A+ MA Y
Sbjct: 73 DAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGE 132
Query: 183 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKD 242
++ RN YHG+ G M N ++ + + L + + +
Sbjct: 133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192
Query: 243 VQDLIDFGTSGHVAGFLSESIQ-GVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFA 301
+ +A + E I G GG+ P +L + K + G L IADE+ GF
Sbjct: 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFG 252
Query: 302 RTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR-----NYFNTFGG 356
RTG F A + G + L A +TT E+AE ++ + TF G
Sbjct: 253 RTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMG 312
Query: 357 NPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFV 416
NP+ AA +A L +++ Q + L+E+L +D ++ DVR G + VE
Sbjct: 313 NPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETT 371
Query: 417 TDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYS 476
+ + E GV + +G + + PP + L ++ +
Sbjct: 372 HPVNMAA--------LQKFFVEQGVWI---RPFGKLIYLMPPYIILPQQLQRLTAAVNRA 420
Query: 477 L 477
+
Sbjct: 421 V 421
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase)
{Escherichia coli [TaxId: 562]}
Length = 467
Score = 91.9 bits (227), Expect = 1e-20
Identities = 53/439 (12%), Positives = 116/439 (26%), Gaps = 74/439 (16%)
Query: 92 YLFDENGRRYLDAFGGIATVCCGHCHPYV---VDSIVNQIKRIQHSTVLYLNHAIAD--- 145
R G+ ++ DS + + + ++ + A +
Sbjct: 16 KRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSGSRS 75
Query: 146 ---FAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY------TGCNDIISLRNAYHG 196
AE++ + + T+ G A ++ I + + +++ N +
Sbjct: 76 YYALAESVKNIF--GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFD 133
Query: 197 NAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256
T G + + V+ D + G + ++ I+ +V
Sbjct: 134 T---TQGHSQINGCTVRN----VYIKEAFDTG-VRYDFKGNFDLEGLERGIEEVGPNNVP 185
Query: 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFAR--TGSHFWGFEAHG 314
++ G ++ L A+Y KK + D + ++
Sbjct: 186 YIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWT 245
Query: 315 V---------VPDIVTMAKGIGNGIPLGAVVTT---PEIAEVLTRRNYFNTFGGNP---- 358
+ D++ M+ +P+G ++ R G P
Sbjct: 246 IEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGG 305
Query: 359 ---VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKY----GIIGDVRGRGFLL 411
L YL + L + G V L
Sbjct: 306 LEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLP 365
Query: 412 GVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYG---------------NVFRIT 456
+ Q A A LY K G+ + G + + R+T
Sbjct: 366 HIPA---DQFPAQALACELY-----KVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLT 417
Query: 457 PP-LCFTKEDADYLVDVMD 474
P +T+ D++++
Sbjct: 418 IPRATYTQTHMDFIIEAFK 436
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 90.0 bits (222), Expect = 6e-20
Identities = 51/373 (13%), Positives = 103/373 (27%), Gaps = 50/373 (13%)
Query: 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHG 196
+ D + + + G A + + Y G + +H
Sbjct: 74 SRNYYDLKDKAKELFN--YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHF 131
Query: 197 NAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256
+ V + D G+ K +++ I + ++
Sbjct: 132 DTTAAHVELNGCKAINIVTEKAFDSETYDDW-------KGDFDIKKLKENIAQHGADNIV 184
Query: 257 GFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSH-----FWGFE 311
+S G ++ L VY+ K+ G + D + +
Sbjct: 185 AIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNAT 244
Query: 312 AHGVVPDIV------TMAKGIGNGIPLGAVVTTPEIAE-------VLTRRNYFNTFGGNP 358
V+ D+ TM+ + +G +V + E F T+GG
Sbjct: 245 IKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLA 304
Query: 359 -VCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVT 417
AA L+ +++ + YL +RL I G + + +
Sbjct: 305 GRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIP--IQYPTGGHAVFVDCKKLV 362
Query: 418 DRQLKTPAKAETLYIMDKMKEMGVLVGKGGFY---------------GNVFRIT-PPLCF 461
+ A+ + I E GV + G + R+T +
Sbjct: 363 PQIPGDQFPAQAV-INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY 421
Query: 462 TKEDADYLVDVMD 474
T + DY+ D +
Sbjct: 422 TNDHMDYIADALI 434
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas
putida [TaxId: 303]}
Length = 345
Score = 83.7 bits (205), Expect = 2e-18
Identities = 39/361 (10%), Positives = 84/361 (23%), Gaps = 33/361 (9%)
Query: 114 GHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173
P V ++V + + A ++ VF +GT AN L
Sbjct: 13 AGASPEVAQALVKHSSG--QAGPYGTDELTAQVKRKFC-EIFERDVEVFLVPTGTAANAL 69
Query: 174 AIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFG 233
+ G + + G P +
Sbjct: 70 CLSAMTPPWGNIYCHPASHINNDEC-----------GAPEFFSNGAKLMTVDGPAAKLDI 118
Query: 234 ADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIA 293
++ + V+ + + + + + A+ K +
Sbjct: 119 VRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLD-----EIEAIGDVCKSSSLGLHM 173
Query: 294 DEVQAGFARTGSHFWGFEAHGVV-PDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFN 352
D + A E D ++ + A+V
Sbjct: 174 DGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKR 233
Query: 353 TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412
+ + + D NA + + L+ G+ +L
Sbjct: 234 AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILF 293
Query: 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDV 472
+ ++D + + G + NV R T ED D+L++
Sbjct: 294 CRLDSA-------------MIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQ 340
Query: 473 M 473
+
Sbjct: 341 V 341
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Thermotoga maritima [TaxId: 2336]}
Length = 343
Score = 69.0 bits (167), Expect = 2e-13
Identities = 39/345 (11%), Positives = 83/345 (24%), Gaps = 31/345 (8%)
Query: 135 TVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194
V + I + A + F SGT N+++IM + + + +
Sbjct: 28 DVYGEDPTINELERLAAETF--GKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIF 85
Query: 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGH 254
+ DP
Sbjct: 86 WYEVGAMA------VLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFP-----------R 128
Query: 255 VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG 314
+ E+ G + + + K+ G D + A S E G
Sbjct: 129 TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG 188
Query: 315 VVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQKD 374
++ VV + E + G A ++ + +
Sbjct: 189 YADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV 248
Query: 375 KLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMD 434
H +L +L + DV+ +L + K ++
Sbjct: 249 DRLKEDHENARFLALKLKEIGYSV-NPEDVKTNMVILRTD---------NLKVNAHGFIE 298
Query: 435 KMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
++ GVL R+ ++ D + +++ + K
Sbjct: 299 ALRNSGVLANAVS--DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 341
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Leishmania major [TaxId: 5664]}
Length = 340
Score = 56.9 bits (135), Expect = 2e-09
Identities = 41/359 (11%), Positives = 81/359 (22%), Gaps = 34/359 (9%)
Query: 116 CHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175
HP ++D + + A A + + V F + GT+ N +A
Sbjct: 12 MHPKILDLMARDNM--TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIAC 69
Query: 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD 235
+ A + +TG A
Sbjct: 70 SL-------------------ALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDG 110
Query: 236 GEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADE 295
A L + + V L + L + S K+ G D
Sbjct: 111 KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDG 170
Query: 296 V-QAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTF 354
A + + + D+ + G+ A++ + + R
Sbjct: 171 ARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRG 230
Query: 355 GGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVE 414
G +++ + L+ GI L
Sbjct: 231 ALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEAC-GIRLAWPSASNQLFPI 289
Query: 415 FVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
L + V K G + R+ +++ V+V+
Sbjct: 290 L-------ENTMIAEL--NNDFDMYTVEPLKDG--TCIMRLCTSWATEEKECHRFVEVL 337
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS)
{Methanococcus maripaludis [TaxId: 39152]}
Length = 434
Score = 52.6 bits (125), Expect = 6e-08
Identities = 42/343 (12%), Positives = 85/343 (24%), Gaps = 28/343 (8%)
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
+ E+ ++ N+ + S + L + AR G N +I ++
Sbjct: 111 MYALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI 170
Query: 199 AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258
V G + + + E+ + + F
Sbjct: 171 KAVSFVGMNMRL-VETVLDGDRVYVPVEDIENAIKKEIELGNR-------PCVLSTLTFF 222
Query: 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG-FEAHGVVP 317
+ + I ++ + I + A + V
Sbjct: 223 PPRNSDDIVEIAKIC-----------ENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDA 271
Query: 318 DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTA-AGHAVLKVIQKDKL 376
+ + K + I G V +T +Y PV + +L
Sbjct: 272 VVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLEL 331
Query: 377 QNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYI---- 432
N L E L L K G + +D ++ AK L +
Sbjct: 332 VKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDP-VEIAAKLYNLRVTGPR 390
Query: 433 -MDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
+ K G + + + + ED V ++
Sbjct: 391 GIKKTDHFGNCYLGTYTH-DYIVMNAAIGVRTEDIVNSVSKLE 432
>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 445
Score = 50.3 bits (119), Expect = 3e-07
Identities = 36/391 (9%), Positives = 85/391 (21%), Gaps = 47/391 (12%)
Query: 114 GHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANEL 173
H D Q K S + + +++ LA + F T +
Sbjct: 70 IHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAG-VHSV-ASCFVVPMATGMSLT 127
Query: 174 AIMMARLYTGCND--IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGV 231
+ + II R + A + +
Sbjct: 128 LCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEP------------VVIENVLEGDE 175
Query: 232 FGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLC 291
D + +Q+L + + + L +
Sbjct: 176 LRTDLKAVEAKIQELGPEHILCLHSTTAC----FAPRVPD----RLEELAVICANYDIPH 227
Query: 292 IADEVQAGFARTGSHF--WGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTP-EIAEVLTRR 348
+ + + H G + + ++ K + + + +++
Sbjct: 228 VVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKM 287
Query: 349 NYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGI-IGDVRGR 407
+ L KL + YL +L L + + +
Sbjct: 288 YPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHN 347
Query: 408 GFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGG-------------------F 448
L + T A + ++ + G G +
Sbjct: 348 PISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNY 407
Query: 449 YGNVFRITPPLCFTKEDADYLVDVMDYSLSK 479
+ +D D + +D L+
Sbjct: 408 PCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 438
>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB
{Escherichia coli [TaxId: 562]}
Length = 450
Score = 42.5 bits (99), Expect = 9e-05
Identities = 43/330 (13%), Positives = 73/330 (22%), Gaps = 29/330 (8%)
Query: 163 FTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHA 222
T +EA L M + + + N Q W V
Sbjct: 120 NTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCG---PVQICWHKFARYWDVELR 176
Query: 223 LNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYK 282
P + M K + + D T G V F L ++
Sbjct: 177 EIP-----MRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH--DALDKFQ 229
Query: 283 SIKKAGGLCIADEVQAGFA---RTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTP 339
+ D GF W F V + K + G V+
Sbjct: 230 ADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRD 289
Query: 340 EIAEVLTRRNYFNTFGGN-----------PVCTAAGHAVLKVIQKDKLQNNAHVVGSYLK 388
E A + GG A + + ++ +
Sbjct: 290 EEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAA 349
Query: 389 ERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGF 448
+ GR + + ++++ G V
Sbjct: 350 YLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTL 409
Query: 449 YGN-----VFRITPPLCFTKEDADYLVDVM 473
G V RI F + A+ L++
Sbjct: 410 GGEATDIVVMRIMCRRGFEMDFAELLLEDY 439
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 41.7 bits (97), Expect = 2e-04
Identities = 45/347 (12%), Positives = 88/347 (25%), Gaps = 43/347 (12%)
Query: 159 KVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTG 218
K + T+ G A L L ++ + A V
Sbjct: 91 KHIVPTHQGRGAENLLSQ---LAIKPGQYVAGNMYFTTTRFHQEKNGA------TFVDIV 141
Query: 219 VHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLP 278
A + G++ + LI + ++A + G ++ +
Sbjct: 142 RDEAHDA---SLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMR 198
Query: 279 AVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP-----------DIVTMAKGIG 327
AV++ G D + V D TM+
Sbjct: 199 AVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKD 258
Query: 328 NGIPLGAVVTT--PEIAE---VLTRRNYFNTFGGNPVCTAAGHAVLKVIQKDKLQNNAHV 382
+ +G + E+ L G + + + + + H
Sbjct: 259 CLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHR 318
Query: 383 VGSYLKERLTALKDKYGIIGDVRGRGFLLGVEF----VTDRQLKTPAKAETLYIMDKMKE 438
V + I+ G L +T Q + A ++Y+ ++
Sbjct: 319 VKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRS 378
Query: 439 MG---VLVGKGGFYG-------NVFRITPPLC-FTKEDADYLVDVMD 474
M V G+ G R+T P +T D + D +
Sbjct: 379 MERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGII 425
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase
{Escherichia coli [TaxId: 562]}
Length = 401
Score = 39.8 bits (92), Expect = 5e-04
Identities = 60/355 (16%), Positives = 102/355 (28%), Gaps = 36/355 (10%)
Query: 138 YLNHA-----IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192
YL A IA + S G V F + EL +A G D I +
Sbjct: 55 YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL-GMEDAILYSS 113
Query: 193 AYHGNAAGTMGATAQSNWKFN--VVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFG 250
+ N + + + + + + A+ +M + +
Sbjct: 114 CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEARE 173
Query: 251 TSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHF--- 307
++ + + G+I L V K L + D+ A +
Sbjct: 174 AGARHVLIATDGVFSMDGVIA----NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSH 229
Query: 308 WGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTR--RNYFNTFGGNPVCTAAGH 365
+ G V I G G E+ E L + R Y + P AA
Sbjct: 230 EYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASI 289
Query: 366 AVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPA 425
VL++++ GS L++RL A ++ G + L
Sbjct: 290 KVLEMVEA----------GSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAV 339
Query: 426 KAETLYIMDKMKEMGVLVGKGGFYGNV------FRITPPLCFTKEDADYLVDVMD 474
A ++++ G+ V G FY V R T E V+
Sbjct: 340 VA--QKFARELQKEGIYVT-GFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFT 391
>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase
{Salmonella typhimurium [TaxId: 90371]}
Length = 361
Score = 37.5 bits (85), Expect = 0.003
Identities = 35/354 (9%), Positives = 66/354 (18%), Gaps = 45/354 (12%)
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
+ V SG+ A E + A I+S
Sbjct: 35 VEQIRQQLTALA--TASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGA--- 89
Query: 199 AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258
G+ H + I H
Sbjct: 90 ----------RMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHS--- 136
Query: 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD 318
+ V + G I D + + + +
Sbjct: 137 ---------ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSA 187
Query: 319 IVTMAKGIGNGI--------------PLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAG 364
+ G + + + F A
Sbjct: 188 NKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAF 247
Query: 365 HAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTP 424
LK + K+ H + L A G + +
Sbjct: 248 AQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFY---SPED 304
Query: 425 AKAETLYIMDKMKEMGVLVGKGGFY-GNVFRITPPLCFTKEDADYLVDVMDYSL 477
+ ++KE G ++ G + FRI D L+ + ++
Sbjct: 305 PQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAM 358
>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 382
Score = 37.4 bits (85), Expect = 0.003
Identities = 6/54 (11%), Positives = 14/54 (25%)
Query: 142 AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195
+ + S + SGT ++ L N + + +
Sbjct: 41 VLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGT 94
>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase
(8-amino-7-oxonanoate synthase, AONS) {Escherichia coli
[TaxId: 562]}
Length = 383
Score = 36.1 bits (82), Expect = 0.008
Identities = 48/355 (13%), Positives = 111/355 (31%), Gaps = 40/355 (11%)
Query: 138 YLNHA-----IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRN 192
YL + I + + G+ + L +A + G + + +
Sbjct: 48 YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAE-WLGYSRALLFIS 106
Query: 193 AYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS 252
+ N A A+ + H +L + +A + + +
Sbjct: 107 GFAANQAVIAAMMAKEDRIA--ADRLSHASLLEAASLS--PSQLRRFAHNDVTHLARLLA 162
Query: 253 GHVAGF---LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWG 309
G ++E + + G L + + ++ G + D+
Sbjct: 163 SPCPGQQMVVTEGVFSMDGDS----APLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS 218
Query: 310 FEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVC--TAAGHAV 367
V P+++ + G G G+ AV+ + +A+ L + + + A A
Sbjct: 219 CWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRAS 278
Query: 368 LKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRG--RGFLLGVEFVTDRQLKTPA 425
L VI+ D+ + + + ++D + D + ++G
Sbjct: 279 LAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDN----------- 327
Query: 426 KAETLYIMDKMKEMGVLVGKGGFYGNV------FRITPPLCFTKEDADYLVDVMD 474
+ L + +K+++ G V V R+T +D D L++V+
Sbjct: 328 -SRALQLAEKLRQQGCWVT-AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLH 380
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS)
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 364
Score = 34.4 bits (77), Expect = 0.023
Identities = 47/343 (13%), Positives = 88/343 (25%), Gaps = 38/343 (11%)
Query: 140 NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAA 199
I DF K G V TN EA + L ++ N ++ +
Sbjct: 45 TPPIHDFIHNQLPKFLG-CDVARVTNGAREAKFAVMHS--LAKKDAWVVMDENCHYSSYV 101
Query: 200 GTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFL 259
A +A+ P+ + + G V L
Sbjct: 102 AAERAGLN--IALVPKTDYPDYAITPENFAQTI--------------EETKKRGEVVLAL 145
Query: 260 SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDI 319
G G + + A I
Sbjct: 146 ITYPDGNYGNLPDVKKIAKVCSEYDVPLLV---------NGAYAIGRMPVSLKEIGADFI 196
Query: 320 VTMAKGIGNGIPLGAVVTT-PEIAEVLTR--RNYFNTFGGNPVCTAAGHAVLKVI----- 371
V V+ E AE++ R Y N CTA G ++ ++
Sbjct: 197 VGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH 256
Query: 372 QKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLY 431
+++++ V + K +GD L+ ++ AK +
Sbjct: 257 VRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFF 316
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
+ ++K + K G + + E+ DY+++
Sbjct: 317 LYRELKSRKIHGIKPGL--TRYFKLSTYGLSDEEVDYVLNAFK 357
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium
[TaxId: 90371]}
Length = 376
Score = 33.8 bits (76), Expect = 0.039
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 118 PYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMM 177
P + + +K + S + + A + +S T +A+M
Sbjct: 8 PAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLT--GNQYAVAVSSATAGMHIALMA 65
Query: 178 ARLYTG 183
+ G
Sbjct: 66 LGIGEG 71
>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA
synthase) {Amycolatopsis mediterranei [TaxId: 33910]}
Length = 384
Score = 33.6 bits (75), Expect = 0.053
Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 5/106 (4%)
Query: 118 PYVVDSIVNQIKRIQHSTVLYLNH--AIADFAEALASKMPGNLKVVFFTNSGTEANELAI 175
P D+ N + R + + F A+ +GT A ELA+
Sbjct: 9 PQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHH--GAAHALAVTNGTHALELAL 66
Query: 176 MMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHH 221
+ + G +I + ++ A + T
Sbjct: 67 QVMGVGPGTE-VIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLD 111
>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 476
Score = 30.6 bits (68), Expect = 0.40
Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 19/230 (8%)
Query: 51 SPPPYDGPSADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIAT 110
+ P + + ++IL + + P + H +S F +A
Sbjct: 44 ATAPQEPDTFEDILQDVEKIIMPGVTHWHS-------PYFFAYFPTAS----SYPAMLAD 92
Query: 111 VCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEA 170
+ CG + + ++ + EA + G V S +EA
Sbjct: 93 MLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQG-SASEA 151
Query: 171 NELAIMMARLY----TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVH-HALNP 225
+A++ AR + A A S+ + + GV A+
Sbjct: 152 TLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS 211
Query: 226 DPYRGVFGADGEMYAKDVQD--LIDFGTSGHVAGFLSESIQGVGGIIELA 273
D + + + + + LI F + S + + +
Sbjct: 212 DGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPIC 261
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 30.4 bits (67), Expect = 0.46
Identities = 39/399 (9%), Positives = 93/399 (23%), Gaps = 69/399 (17%)
Query: 137 LYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHG 196
L ++ A AE A+++ K F + AN + A + G ++ RN H
Sbjct: 61 LLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNAN-NTVTSALVSNGDL-VLFDRNN-HK 117
Query: 197 NAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVA 256
+ + A A + + + A V
Sbjct: 118 SVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRL 177
Query: 257 GFL-----SESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE 311
+ +I +++ + G ++ +
Sbjct: 178 AVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPED 237
Query: 312 AHGVVPDIVTMAKGIG----------NGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVC- 360
+V + ++ K + + + N F +
Sbjct: 238 PGIIV--VQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMY 295
Query: 361 --TAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVR------------- 405
A+ + KL ++ + +++L +
Sbjct: 296 AALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTED 355
Query: 406 -----------------GRGFLLGVEFVTDRQ---LKTPAKAETLYIM-----------D 434
++ D L TP +
Sbjct: 356 MANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVAN 415
Query: 435 KMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
+++ G++ K +F +TP T + L+ +
Sbjct: 416 YLRDHGIIPEKSDLNSILFLMTP--AETPAKMNNLITQL 452
>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp.
[TaxId: 1143]}
Length = 381
Score = 30.7 bits (67), Expect = 0.46
Identities = 6/42 (14%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVM 473
I+ K++E + + + R +E+ ++L+ +
Sbjct: 336 IVQKLEEQRIYLRTIA-DPDCIRACCHYITDEEEINHLLARL 376
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
{Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Length = 361
Score = 30.0 bits (66), Expect = 0.69
Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 432 IMDKMKEMGVLVGKGGFYGNV--FRITPPLCFTKEDADYLVDVMDY 475
+ ++ G + KG + +V R + E + LV M++
Sbjct: 312 FVKASEQEGFVGLKG--HRSVGGLRASIYNAVPYESCEALVQFMEH 355
>d1q88a_ e.47.1.1 (A:) 39 kda initiator binding protein, IBP39,
C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
Length = 192
Score = 29.2 bits (65), Expect = 0.72
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 77 HLYSKPLNVVDGKMQYLFDENGRRY 101
+++KPL ++ QYL DENG +Y
Sbjct: 147 KIWNKPL--IEATGQYLMDENGEKY 169
>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase
{Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}
Length = 388
Score = 29.7 bits (65), Expect = 0.79
Identities = 42/353 (11%), Positives = 90/353 (25%), Gaps = 33/353 (9%)
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
++ ++ N + + S E + +L
Sbjct: 52 MDEVKDGLRYIFQTE---NRATMCVSGSAHAGMEAMLS------------NLLEEGDRVL 96
Query: 199 AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258
G A+ + + + P R + Q F T G +
Sbjct: 97 IAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSG 156
Query: 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVP- 317
L + ++GVG I L V G D+ + TG+ G+ P
Sbjct: 157 LLQPLEGVGQICH-QHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPI 215
Query: 318 -------DIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKV 370
D++ + ++ + Y +T N +
Sbjct: 216 SISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIA 275
Query: 371 IQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETL 430
+ + Q + + + + D R R + + + + ++
Sbjct: 276 EEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTV-TGIMIPKGVDWWKVSQYA 334
Query: 431 YIMDKMKEMGVLV--GKGGFYGNVFRITPPLCF-TKEDADYLVDVMDYSLSKM 480
M + V G G +G +R+ T + + + SL
Sbjct: 335 -----MNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT 382
>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c)
{Campylobacter jejuni [TaxId: 197]}
Length = 374
Score = 29.2 bits (64), Expect = 1.0
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 143 IADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDII 188
+ F +++ + NS T A LA+ +A + +DI+
Sbjct: 23 VNRFEQSVKDYS--KSENALALNSATAALHLALRVAGV--KQDDIV 64
>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate
aminotransferase {Thermus thermophilus [TaxId: 274]}
Length = 348
Score = 28.8 bits (63), Expect = 1.4
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 421 LKTPAKAETLYIMDKMKEMGVLV--GKGGFYGNVFRITPPLCFTKEDADYLVDVMDYSLS 478
P + + + G ++ G+G G VFR++ + + +A + + L
Sbjct: 286 FYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLE 345
Query: 479 KM 480
++
Sbjct: 346 EI 347
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ
{Enterobacter aerogenes [TaxId: 548]}
Length = 271
Score = 28.1 bits (61), Expect = 2.1
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 76 FHLYSKPLNVVDGKMQYLFDENGRRY---LDAFGGIATVCCGHCHPYVVDSIVNQIKRIQ 132
++ PL + + +M + ENG R ++ F + + CGH H + +
Sbjct: 153 IFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTL 212
Query: 133 HSTVLYLNHAIADFAEALASKMPG 156
TV + + AD
Sbjct: 213 PGTVHQVPYCHADTDPYYDLSPAS 236
>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase
{Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}
Length = 377
Score = 28.1 bits (61), Expect = 2.7
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 427 AETLYIMDKMKEMGVLVGKGGFYGNVFRITPPLCF-TKEDADYLVDVMDYSL 477
+ + V G G G V+R+ KE D L+ ++ L
Sbjct: 325 KAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 376
Score = 27.4 bits (59), Expect = 3.8
Identities = 8/57 (14%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYH 195
++ + ++ N + + +GT A E I A I +
Sbjct: 53 MDEIQSLLRYVWQTE---NPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGN 106
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 28.0 bits (61), Expect = 2.8
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 16/139 (11%)
Query: 101 YLDAFGGIATVCCGHCHPYVVDSIVNQIK---------RIQHSTVLYLNHAIADFAEALA 151
YLD AT P V + ++ + H A+ +A
Sbjct: 5 YLD---YSAT---TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIA 58
Query: 152 SKMPGNLKVVFFTNSGTEANELAIM-MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW 210
+ + + + FT+ TE++ LAI A Y I H T + +
Sbjct: 59 DLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGF 118
Query: 211 KFNVVQTGVHHALNPDPYR 229
+ + + ++
Sbjct: 119 EVTYLAPQRNGIIDLKELE 137
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 27.6 bits (61), Expect = 3.0
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 14/77 (18%)
Query: 2 QRFAAR-RVLSETNSLRLPQRCFFSQLAQKEESSLSEHETFLP------------RMPPF 48
R R L+E + + + L + +++ L P MPP
Sbjct: 12 ARRGERLLQLAEGHPMG-DYLRLVAGLCRLQQALLDNPPALAPLDPERLRKSREHGMPPL 70
Query: 49 DYSPPPYDGPSADEILA 65
Y +G + A
Sbjct: 71 AYDLLVREGAWLPWLDA 87
>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 27.8 bits (60), Expect = 3.6
Identities = 43/349 (12%), Positives = 84/349 (24%), Gaps = 27/349 (7%)
Query: 139 LNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNA 198
++ ++ N + + SG A E A++ +
Sbjct: 54 MDEIKEGIQYVFQTR---NPLTLVISGSGHCALEAALVN------------VLEPGDSFL 98
Query: 199 AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGF 258
G G Q H + DP + E + ++ F T G +
Sbjct: 99 VGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTG 158
Query: 259 LSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPD 318
+ + + G G + L G D +GS G
Sbjct: 159 VLQPLDGFGELCHRYKCLLLVDS-VASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLI 217
Query: 319 IVTMA-----KGIGNGIPLGAVVTTPEIAEVLTRRNYFNTFGGNPVCTAAGHAVLKVIQK 373
+ + PV + +
Sbjct: 218 SFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIA 277
Query: 374 DKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLGVEFVTDRQLKTPAKAETLYIM 433
++ N+ L G+ V+ L VT + + +
Sbjct: 278 EQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPT--VTTVAVPAGYDWRDI-VS 334
Query: 434 DKMKEMGVLV--GKGGFYGNVFRI-TPPLCFTKEDADYLVDVMDYSLSK 479
+ + + G G G V RI T+E+ D + + + +L
Sbjct: 335 YVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQH 383
>d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus
[TaxId: 63363]}
Length = 184
Score = 26.6 bits (58), Expect = 4.8
Identities = 16/72 (22%), Positives = 19/72 (26%), Gaps = 8/72 (11%)
Query: 285 KKAGGLCIADEVQAGFART-GSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTP---- 339
K A + G S G + VT G + GAVV
Sbjct: 86 KIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVFGVTDYVGKKFTLHYGAVVAGEPRSE 145
Query: 340 ---EIAEVLTRR 348
E L RR
Sbjct: 146 EEKEACRRLGRR 157
>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2
(P-protein) {Thermus thermophilus [TaxId: 274]}
Length = 471
Score = 27.1 bits (59), Expect = 4.8
Identities = 46/364 (12%), Positives = 81/364 (22%), Gaps = 30/364 (8%)
Query: 117 HPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIM 176
HPY R+ L + A + +G I+
Sbjct: 93 HPYQDPRTAQGALRLMWE----LGEYLKALTGMDAITLE--------PAAGAHGELTGIL 140
Query: 177 MARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG 236
+ R Y R + A ++ V+ + G
Sbjct: 141 IIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG 200
Query: 237 EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIAD-- 294
A + + + G+ G + G +
Sbjct: 201 PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVH 260
Query: 295 --EVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRNYFN 352
+ G G GV + + + + R F
Sbjct: 261 LNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFY 320
Query: 353 TFGGNPVCTAAGHAVLKVIQKDKLQNNAHVVGSYLKERLTALKDKYGIIGDVRGRGFLLG 412
V A L + K A + YLKE L K+K +
Sbjct: 321 GNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELL---KEKGYRV--------PYD 369
Query: 413 VEFVTDRQLKTPAKAETLYIMDKMKEMGVLVGKGGFYGNV---FRITPPLCFTKEDADYL 469
+ + + P L + + E+G F V + P KE +
Sbjct: 370 GPSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAF 429
Query: 470 VDVM 473
+ M
Sbjct: 430 AEAM 433
>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId:
294]}
Length = 404
Score = 27.0 bits (58), Expect = 6.0
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITP-PLCFTKEDADYLVDVMDYSLSK 479
++ + + GV+ + R PL T + V ++ L +
Sbjct: 354 VIQALIDRGVIGDYRE--PRIMRFGFTPLYTTFTEVWDAVQILGEILDR 400
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Bacillus alcalophilus [TaxId: 1445]}
Length = 360
Score = 26.6 bits (57), Expect = 7.1
Identities = 8/43 (18%), Positives = 14/43 (32%)
Query: 432 IMDKMKEMGVLVGKGGFYGNVFRITPPLCFTKEDADYLVDVMD 474
+ K KE G + G R + + L ++M
Sbjct: 312 FLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMI 354
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Length = 250
Score = 26.2 bits (56), Expect = 8.3
Identities = 17/112 (15%), Positives = 31/112 (27%), Gaps = 3/112 (2%)
Query: 136 VLYL-NHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAY 194
VL N A+ AE L M L +V TN ++ + D+
Sbjct: 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATA--GVDVPDSVFYT 70
Query: 195 HGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDL 246
A + + V + + H L + + + +
Sbjct: 71 SAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122
>d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease
{Helicobacter pylori [TaxId: 210]}
Length = 180
Score = 25.8 bits (57), Expect = 8.5
Identities = 10/48 (20%), Positives = 14/48 (29%)
Query: 301 ARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRR 348
A W GV P+++ I A + P V R
Sbjct: 130 AGADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYRE 177
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 26.1 bits (57), Expect = 8.6
Identities = 7/51 (13%), Positives = 18/51 (35%)
Query: 104 AFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKM 154
+ G + C P+ S +I+ + + +D + ++M
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM 249
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.416
Gapped
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,856,300
Number of extensions: 90709
Number of successful extensions: 362
Number of sequences better than 10.0: 1
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 57
Length of query: 480
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 391
Effective length of database: 1,185,626
Effective search space: 463579766
Effective search space used: 463579766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)