Citrus Sinensis ID: 011673

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

MEISTEAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGHPKDGNNDNKLEVDRISSFSWSGQRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK

cccccHHcHHHHHHHHHHcccEEcccEEEEcccccEEEEEEccccccccEEEccccccccHHHHcccccccHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHccccccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccccccccccccHHcccccccHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccEEEEEEccccccccEEEcccccccHHHHHHHcccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHcccccccccccEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHcc

cccccHHHHHHHHHHHHHcccEEcccEEEEEcccccEEEEEEccccccEEEEEccHEEEcHHHHHHcccccccHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHcccccccccEccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccccHHHHccccccccccccccccHHHHHHHHHHHHcccccHHHccccccccccccccccccccEEEEHHHHccccccccEEEEEcccccccccccccEEEEEEccccccccEEEEccccccHHHHHHHcccEcccccccEEEEEEcHHHccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccHcHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHccc

MEISTEAKLEPFLQWLQVNKVELRgckikysdeskgfgifssnefsdgVLLVVpldlaitpmrvlqdpligpecramfedgevdDRFLMILFLTVERLrknsswkpyldmlpttfgnplwftddellELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLdgdseranSIFWTRalniplphsyvfpqnqedlnkydsinnsaelsndhnsrgelingLNDIKNEAQRVNSQVNGATSTLTSTQGETLWIeglvpgidfcnhdlkaaatwevdgtglitgvPFSMYLLSVerssfhsekEISISYGNKGNEELLYLYGFvidnnpddylmihypaeaihsiplsdsKALLLEEQKAQLRCLlpksllehgffaaghpkdgnndnklevdrissfswsgqrrmpsylnklvfpeNFLTALRTIAMQEDEISKVSSLLEELVgsggerqpsdaEVRAAVWETCGDSGALQLLVDLLQAK

meisteaklepflqwlQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERlrknsswkpyLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVldgdseranSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAaghpkdgnndnkLEVDRISSfswsgqrrmpsylnklvFPENFLTALRTIAMQEDEISKVSSLLEELVGsggerqpsdAEVRAAVWETCGDSGALQLLVDLLQAK

MEISTEAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNlltlyddkvkdlvkkllvldGDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGHPKDGNNDNKLEVDRISSFSWSGQRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK

********LEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIPLPHSYVFP*******************************************************TQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAG**************RISSFSWSGQRRMPSYLNKLVFPENFLTALRTIAMQE**************************VRAAVWETCGDSGALQLLVDLL***

*****EA***PFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFF************************SGQRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLL****************VRAAVWETCGDSGALQLLVDLLQA*

*****EAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNG*********GETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGH**********************QRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK

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MEISTEAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGxxxxxxxxxxxxxxxxxxxxxLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGHPKDGNNDNKLEVDRISSFSWSGQRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		480	2.2.26 [Sep-21-2011]
Q43088		489	Ribulose-1,5 bisphosphate	N/A	no	0.268	0.263	0.326	2e-08
P38732		585	N-lysine methyltransferas	yes	no	0.631	0.517	0.245	6e-08
B2KI88		594	Histone-lysine N-methyltr	N/A	no	0.516	0.417	0.219	3e-07
B0VX69		595	Histone-lysine N-methyltr	yes	no	0.514	0.415	0.215	1e-06
C1FXW2		589	Histone-lysine N-methyltr	N/A	no	0.514	0.419	0.218	1e-06
Q5ZML9		593	Histone-lysine N-methyltr	yes	no	0.514	0.416	0.221	2e-06
Q91WC0		594	Histone-lysine N-methyltr	yes	no	0.514	0.415	0.221	3e-06
Q9XI84		482	[Fructose-bisphosphate al	no	no	0.25	0.248	0.312	3e-06
P94026		491	Ribulose-1,5 bisphosphate	N/A	no	0.256	0.250	0.282	8e-06
E2RBS6		588	Histone-lysine N-methyltr	yes	no	0.506	0.413	0.218	1e-05

>sp\|Q43088\|RBCMT_PEA Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Pisum sativum GN=RBCMT PE=1 SV=1	Back alignment and function desciption

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 3   ISTEAKLEP----FLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFS-DGVLLVVPLDL 57
           + TE  L P    F +WLQ   V      +K S  ++G G+ +  + S + V+L VP  L
Sbjct: 44  VGTEPSLSPAVQTFWKWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRL 103

Query: 58  AITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGN 117
            I P  V     IG  C       E+     +ILFL  ER R++S WK Y  +LP    +
Sbjct: 104 WINPDAVAASE-IGRVC------SELKPWLSVILFLIRERSREDSVWKHYFGILPQETDS 156

Query: 118 PLWFTDDELLELKGTTLYRAT 138
            ++++++EL EL+G+ L + T
Sbjct: 157 TIYWSEEELQELQGSQLLKTT 177

Methylates 'Lys-14' of the large subunit of RuBisCO.
Pisum sativum (taxid: 3888)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 2EC: 7

>sp\|P38732\|EFM1_YEAST N-lysine methyltransferase EFM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EFM1 PE=1 SV=1	Back alignment and function description

>sp\|B2KI88\|SETD3_RHIFE Histone-lysine N-methyltransferase setd3 OS=Rhinolophus ferrumequinum GN=SETD3 PE=3 SV=1	Back alignment and function description

>sp\|B0VX69\|SETD3_CALJA Histone-lysine N-methyltransferase setd3 OS=Callithrix jacchus GN=SETD3 PE=3 SV=2	Back alignment and function description

>sp\|C1FXW2\|SETD3_DASNO Histone-lysine N-methyltransferase setd3 OS=Dasypus novemcinctus GN=SETD3 PE=3 SV=1	Back alignment and function description

>sp\|Q5ZML9\|SETD3_CHICK Histone-lysine N-methyltransferase setd3 OS=Gallus gallus GN=SETD3 PE=2 SV=1	Back alignment and function description

>sp\|Q91WC0\|SETD3_MOUSE Histone-lysine N-methyltransferase setd3 OS=Mus musculus GN=Setd3 PE=1 SV=1	Back alignment and function description

>sp\|Q9XI84\|RBCMT_ARATH [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=LSMT-L PE=1 SV=1	Back alignment and function description

>sp\|P94026\|RBCMT_TOBAC Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum GN=RBCMT PE=2 SV=1	Back alignment and function description

>sp\|E2RBS6\|SETD3_CANFA Histone-lysine N-methyltransferase setd3 OS=Canis familiaris GN=SETD3 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		480
296085170		565	unnamed protein product [Vitis vinifera]	0.989	0.840	0.692	0.0
225430662		561	PREDICTED: uncharacterized protein LOC10	0.989	0.846	0.692	0.0
224130176		551	predicted protein [Populus trichocarpa]	0.927	0.807	0.679	0.0
297848312		548	SET domain-containing protein [Arabidops	0.945	0.828	0.664	0.0
79316289		547	SET domain-containing protein [Arabidops	0.947	0.831	0.666	1e-180
42561607		572	SET domain-containing protein [Arabidops	0.95	0.797	0.635	1e-176
449525577		553	PREDICTED: uncharacterized protein LOC10	0.95	0.824	0.643	1e-176
449451195		553	PREDICTED: uncharacterized protein LOC10	0.947	0.822	0.640	1e-175
357507175		571	Ribulose-1,5 bisphosphate carboxylase/ox	0.939	0.789	0.608	1e-172
357125312		558	PREDICTED: uncharacterized protein LOC10	0.954	0.820	0.562	1e-156

>gi\|296085170\|emb\|CBI28665.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/491 (69%), Positives = 394/491 (80%), Gaps = 16/491 (3%)

Query: 1   MEISTEAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDGVLLVVPLDLAIT 60
           M  + EAKL+ FLQWLQ+N+VELRGC+IKY D +KGFGIF +N+ SDG+ LVVPLDLAIT
Sbjct: 1   MASTEEAKLQHFLQWLQLNRVELRGCEIKYCDSNKGFGIFYANDASDGIPLVVPLDLAIT 60

Query: 61  PMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLW 120
           PMRVLQDP +GPECRAMFE+GEVDDR LMILFLTVERLRKNSSWKPYLDMLPTTFG PLW
Sbjct: 61  PMRVLQDPFLGPECRAMFEEGEVDDRLLMILFLTVERLRKNSSWKPYLDMLPTTFGTPLW 120

Query: 121 FTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSER---------AN 171
           F DDE +ELKGT+++RATELQK+ L +LYDDKVKDLVKKLL+LDGDS+          AN
Sbjct: 121 FIDDEFIELKGTSVHRATELQKKQLQSLYDDKVKDLVKKLLILDGDSKGEVHFEDFLWAN 180

Query: 172 SIFWTRALNIPLPHSYVFPQNQEDLNKY--DSINNSAELSNDHNSRGELINGLNDIKNEA 229
           SIFWTRALNIPLP SYVFPQ QE+ N    + I +S   + D  S G L++G+++   + 
Sbjct: 181 SIFWTRALNIPLPRSYVFPQIQEEQNSCIPNIIKDSGAFT-DQISSGNLVSGMDEKSTDV 239

Query: 230 QRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMY 289
               SQVN  TS  +S Q E LW+EGLVPGIDFCNHDLKAAATWEVD TGL TGVP SMY
Sbjct: 240 HGFESQVNRGTS--SSMQEEILWVEGLVPGIDFCNHDLKAAATWEVDNTGLKTGVPLSMY 297

Query: 290 LLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDS 349
           LLSVE+S  H +KEISISYGNKGNEELLYLYGFVIDNNPDDYLM+HYP E   ++P S+S
Sbjct: 298 LLSVEQSPCHMQKEISISYGNKGNEELLYLYGFVIDNNPDDYLMVHYPMELFKNVPFSES 357

Query: 350 KALLLEEQKAQLRCLLPKSLLEHGFFAAGHPKDGNNDNKLEVDRISSFSWSGQRRMPSYL 409
           K  LLE QKA++RCLL K+LL+ GFF A   K+  N    +  ++ ++SWSGQR+ PSYL
Sbjct: 358 KGQLLEAQKAEMRCLLHKTLLDRGFFPASTLKNEQNGKSTD-HQVCNYSWSGQRKTPSYL 416

Query: 410 NKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGA 469
           NKLVFPE FLTALRTI+M+EDE+S+VSSLLEEL  SGG RQP D+E RAAVWE CGDSGA
Sbjct: 417 NKLVFPEAFLTALRTISMEEDELSRVSSLLEELAESGG-RQPLDSETRAAVWEACGDSGA 475

Query: 470 LQLLVDLLQAK 480
           LQ+LVDLL  K
Sbjct: 476 LQVLVDLLNVK 486

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225430662\|ref\|XP_002268533.1\| PREDICTED: uncharacterized protein LOC100267311 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224130176\|ref\|XP_002320771.1\| predicted protein [Populus trichocarpa] gi\|222861544\|gb\|EEE99086.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297848312\|ref\|XP_002892037.1\| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi\|297337879\|gb\|EFH68296.1\| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|79316289\|ref\|NP_001030933.1\| SET domain-containing protein [Arabidopsis thaliana] gi\|63003834\|gb\|AAY25446.1\| At1g01920 [Arabidopsis thaliana] gi\|332189233\|gb\|AEE27354.1\| SET domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|42561607\|ref\|NP_171694.3\| SET domain-containing protein [Arabidopsis thaliana] gi\|332189232\|gb\|AEE27353.1\| SET domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|449525577\|ref\|XP_004169793.1\| PREDICTED: uncharacterized protein LOC101224730 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449451195\|ref\|XP_004143347.1\| PREDICTED: uncharacterized protein LOC101219815 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357507175\|ref\|XP_003623876.1\| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Medicago truncatula] gi\|355498891\|gb\|AES80094.1\| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357125312\|ref\|XP_003564338.1\| PREDICTED: uncharacterized protein LOC100842937 [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		480
TAIR\|locus:2025477		572	AT1G01920 "AT1G01920" [Arabido	0.964	0.809	0.610	6.9e-150
CGD\|CAL0004578		579	orf19.7326 [Candida albicans (	0.162	0.134	0.395	1.1e-10
SGD\|S000001031		585	EFM1 "Lysine methyltransferase	0.266	0.218	0.303	1.5e-10
POMBASE\|SPBC1709.13c		547	set10 "ribosomal lysine methyl	0.214	0.188	0.364	1.8e-10
TAIR\|locus:2014764		482	LSMT-L "lysine methyltransfera	0.25	0.248	0.312	2.3e-09
UNIPROTKB\|E2RBS6		588	SETD3 "Histone-lysine N-methyl	0.260	0.212	0.255	2e-07
UNIPROTKB\|A9X1D0		595	SETD3 "Histone-lysine N-methyl	0.260	0.210	0.248	2.7e-07
UNIPROTKB\|Q86TU7		594	SETD3 "Histone-lysine N-methyl	0.260	0.210	0.248	3.4e-07
UNIPROTKB\|B1MTJ4		595	SETD3 "Histone-lysine N-methyl	0.260	0.210	0.248	3.4e-07
UNIPROTKB\|B5FW36		595	SETD3 "Histone-lysine N-methyl	0.260	0.210	0.255	3.4e-07

TAIR\|locus:2025477 AT1G01920 "AT1G01920" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
 Identities = 314/514 (61%), Positives = 359/514 (69%)

Query:     1 MEISTE-AKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSN--EFSDGVLLVVPLDL 57
             M IS E AKLE FL WLQVN  ELRGC IKYSD  KGFGIF+S   + SD VLLVVPLDL
Sbjct:     1 MAISEEEAKLERFLDWLQVNGGELRGCNIKYSDSLKGFGIFASTSTQASDEVLLVVPLDL 60

Query:    58 AITPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGN 117
             AITPMRVLQDPL+GPEC+ MFE G+VDDRFLMILFLT+ERLR NSSWKPYLDMLPT FGN
Sbjct:    61 AITPMRVLQDPLLGPECQKMFEQGQVDDRFLMILFLTLERLRINSSWKPYLDMLPTRFGN 120

Query:   118 PLWFTDDELLELKGTTLYRATELQKQNXXXXXXXXXXXXXXXXXXXXGDSER-------- 169
             PLWF+DD++LELKGT LY ATELQK+                     GDSE         
Sbjct:   121 PLWFSDDDILELKGTNLYHATELQKKKLLSLYHDKVEVLVTKLLILDGDSESKVSFEHFL 180

Query:   170 -ANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNE 228
              ANS+FW+RALNIPLPHS+VFPQ+Q+D  +  S + S E +         +N  N+ K +
Sbjct:   181 WANSVFWSRALNIPLPHSFVFPQSQDDTGECTSTSESPETAP--------VNS-NEEKGK 231

Query:   229 AQRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSM 288
             +      +  A    +   G+T+W+EGLVPGIDFCNHDLK  ATWEVDG G ++ VPFSM
Sbjct:   232 S------LTSAQPAPSVGSGDTIWVEGLVPGIDFCNHDLKPVATWEVDGIGSVSRVPFSM 285

Query:   289 YLLSVERSSFHSEKEISISYGNKGNEELLYLYGFVIDNNPDDYLMI-------------- 334
             YLLSV +     +KEISISYGNKGNEELLYLYGFVIDNNPDDYLMI              
Sbjct:   286 YLLSVAQRPI-PKKEISISYGNKGNEELLYLYGFVIDNNPDDYLMIKEMLVNFVLTSVVT 344

Query:   335 --------HYPAEAIHSIPLSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGHPKDGNND 386
                     HYP EAI SIP SDSK  LLE Q AQLRCLLPKS+L HGFF         +D
Sbjct:   345 FNNGFIQVHYPVEAIPSIPFSDSKGQLLEAQNAQLRCLLPKSVLNHGFFPRTTSVIRESD 404

Query:   387 NKLEVDRISSFSWSGQRRMPSYLNKLVFPENFLTALRTIAMQEDEISKVSSLLEELVGSG 446
              K E  R  +FSWSG+R+MP+Y+NKLVFPE+F+T LRTIAMQE+EI KVS++LEELV S 
Sbjct:   405 EK-ETVRSCNFSWSGKRKMPTYMNKLVFPEDFMTGLRTIAMQEEEIYKVSAMLEELVESR 463

Query:   447 GERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK 480
                QPS+ EVR AVWE CGDSGALQLLVDLL +K
Sbjct:   464 QGEQPSETEVRMAVWEACGDSGALQLLVDLLNSK 497

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

CGD\|CAL0004578 orf19.7326 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

SGD\|S000001031 EFM1 "Lysine methyltransferase involved in the monomethylation of eEF1A (Te" [Saccharomyces cerevisiae (taxid:4932)]	Back alignment and assigned GO terms

POMBASE\|SPBC1709.13c set10 "ribosomal lysine methyltransferase Set10" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

TAIR\|locus:2014764 LSMT-L "lysine methyltransferase (LSMT)-like" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RBS6 SETD3 "Histone-lysine N-methyltransferase setd3" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|A9X1D0 SETD3 "Histone-lysine N-methyltransferase setd3" [Papio anubis (taxid:9555)]	Back alignment and assigned GO terms

UNIPROTKB\|Q86TU7 SETD3 "Histone-lysine N-methyltransferase setd3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|B1MTJ4 SETD3 "Histone-lysine N-methyltransferase setd3" [Callicebus moloch (taxid:9523)]	Back alignment and assigned GO terms

UNIPROTKB\|B5FW36 SETD3 "Histone-lysine N-methyltransferase setd3" [Otolemur garnettii (taxid:30611)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00026746001	SubName- Full=Chromosome chr4 scaffold_39, whole genome shotgun sequence; (565 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		480
KOG1338		466	consensus Uncharacterized conserved protein [Funct	99.97
KOG1337		472	consensus N-methyltransferase [General function pr	99.96
PF00856		162	SET: SET domain; InterPro: IPR001214 The SET domai	99.61
smart00317		116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	98.07
PF09273		128	Rubis-subs-bind: Rubisco LSMT substrate-binding; I	97.18
KOG2589		453	consensus Histone tail methylase [Chromatin struct	94.46
KOG1085		392	consensus Predicted methyltransferase (contains a	93.21
KOG1079		739	consensus Transcriptional repressor EZH1 [Transcri	90.15
KOG4442		729	consensus Clathrin coat binding protein/Huntingtin	88.57
smart00317		116	SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)	85.87

>KOG1338 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Probab=99.97  E-value=4.9e-31  Score=258.00  Aligned_cols=251  Identities=19%  Similarity=0.214  Sum_probs=192.9

Q ss_pred             hhCHHHHHHHHHHCC-cccc-CeeEEEcc---CCCceEEEEccCC-CCCeEEEcccccccCccccccCCCCC--hhhhhh
Q 011673            6 EAKLEPFLQWLQVNK-VELR-GCKIKYSD---ESKGFGIFSSNEF-SDGVLLVVPLDLAITPMRVLQDPLIG--PECRAM   77 (480)
Q Consensus         6 ~~~~~~fl~Wl~~~G-~~~~-~v~i~~~~---~~~GrGl~At~dI-~ge~l~~IP~~~~lt~~~~~~~~~~g--~~~~~~   77 (480)
                      .+..+.|+.|++.-+ .+.+ +|.+.+.+   +..|+|++|+++| +||.||.+|++.+|+..+...   .+  |...+.
T Consensus         6 ~d~~~~fl~w~k~t~eletSpKi~~ndl~~v~~~~G~g~vAtesIkkgE~Lf~~prdsvLsvtts~l---i~~lps~~rv   82 (466)
T KOG1338|consen    6 SDLAKRFLLWGKLTLELETSPKIDNNDLPWVERIAGAGIVATESIKKGESLFAYPRDSVLSVTTSAL---ITPLPSDIRV   82 (466)
T ss_pred             ccHHHHHHHHHHHhhheeecccccccccchhhhhcccceeeehhhcCCceEEEecCccEEeeehHHh---cccchHHHHH
Confidence            345789999999987 6666 57666543   2358999999999 899999999999999887532   22  122222


Q ss_pred             hcCCCCChHHHHHHHHHHHhhcCC-CCcHhhHhhcCC--CCCCCCCCCHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011673           78 FEDGEVDDRFLMILFLTVERLRKN-SSWKPYLDMLPT--TFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVK  154 (480)
Q Consensus        78 ~~~~~l~~~~~Lal~Ll~E~~~~~-S~W~pYl~~LP~--~~~tPl~w~~~el~~L~gt~l~~~~~~~~~~~~~~y~~~~~  154 (480)
                      +- ..++.|..|++.|++|..-++ |+|+|||+.+|+  ..++|+||+++|++.|.-+.++..+.++++++.++|...++
T Consensus        83 ~L-ne~gsw~~Lllvll~E~~~pq~SrWrPYfs~wp~p~rm~spifWdEnEl~~Ll~stvlee~~Kd~aeI~~~~i~~i~  161 (466)
T KOG1338|consen   83 LL-NEVGSWGMLLLVLLREKKMPQKSRWRPYFSRWPQPARMHSPIFWDENELSMLLCSTVLEETVKDKAEIEKDFIFVIQ  161 (466)
T ss_pred             Hh-hcCCcHHHHHHHHHHHhhcccccccccHHHhCCChhhcCCCccCCchHHHHHhhcccchhhHhHHHHHHHHHHHHHH
Confidence            22 257799999999999997665 999999999998  48899999999998654444445488999999999999999


Q ss_pred             HHHHHhhccC-----CChhhHHHHHHhhhcCCCCCCCCCCCcccccccccccccccccccccccccchhhcccchhhhhh
Q 011673          155 DLVKKLLVLD-----GDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEA  229 (480)
Q Consensus       155 ~l~~~~~~~~-----~~~~~a~~~v~SRa~~~~~~~s~~fp~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~a  229 (480)
                      ++.+.+|.++     ++|..+++++.+.+|.++...+.       +          ++                  +   
T Consensus       162 pf~~~~p~vfs~~slEdF~y~~Al~laysfdve~~~s~-------~----------~~------------------e---  203 (466)
T KOG1338|consen  162 PFKQHCPIVFSRPSLEDFMYAYALGLAYSFDVEFLLSL-------D----------NL------------------E---  203 (466)
T ss_pred             HHHHhCcchhcccCHHHHHHHHHHHHHHheeeehhcch-------h----------hh------------------h---
Confidence            9999988876     35678999999999977554320       0          00                  0   


Q ss_pred             hhhhccccCCCcccCCCCCCccccceechhhhccCCCCC-CceeEEEcCCCccccCCcceeEEEeecccCCCCCeeeecc
Q 011673          230 QRVNSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLK-AAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISY  308 (480)
Q Consensus       230 ~~~~s~~~~~~~~~~~~~~~~~~~~~LvP~~D~lNH~~~-~~~~~~~d~~g~~~~~~~s~~l~~~a~~~i~~GeEIfisY  308 (480)
                             ...        +......+|+|.+||+||+.. .++...++.          +|+.|+|+++|.+|+|||++|
T Consensus       204 -------ee~--------e~e~ngk~m~p~ad~lNhd~~k~nanl~y~~----------NcL~mva~r~iekgdev~n~d  258 (466)
T KOG1338|consen  204 -------EES--------EIECNGKLMTPIADFLNHDGLKANANLRYED----------NCLEMVADRNIEKGDEVDNSD  258 (466)
T ss_pred             -------hhh--------ccccCcccccchhhhhccchhhcccceeccC----------cceeeeecCCCCCcccccccc
Confidence                   000        111113599999999999987 667666654          269999999999999999999


Q ss_pred             CCCCcHHHHHhCCccCC
Q 011673          309 GNKGNEELLYLYGFVID  325 (480)
Q Consensus       309 G~~sN~eLL~~YGFv~~  325 (480)
                      |-|+|+  |++||.+.-
T Consensus       259 g~~p~~--l~~l~ka~c  273 (466)
T KOG1338|consen  259 GLKPMG--LLKLTKALC  273 (466)
T ss_pred             ccCcch--hhhhhhhcc
Confidence            999999  788887763

>KOG1337 consensus N-methyltransferase [General function prediction only]	Back alignment and domain information

>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco

Back alignment and domain information

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	Back alignment and domain information

>PF09273 Rubis-subs-bind: Rubisco LSMT substrate-binding; InterPro: IPR015353 This domain adopts a multihelical structure, with an irregular array of long and short alpha-helices	Back alignment and domain information

>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics]	Back alignment and domain information

>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only]	Back alignment and domain information

>KOG1079 consensus Transcriptional repressor EZH1 [Transcription]	Back alignment and domain information

>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		480
1mlv_A		444	Structure And Catalytic Mechanism Of A Set Domain P		3e-09
2h21_A		440	Structure Of Rubisco Lsmt Bound To Adomet Length =		4e-09
3smt_A		497	Crystal Structure Of Human Set Domain-Containing Pr		2e-05

>pdb|1MLV|A Chain A, Structure And Catalytic Mechanism Of A Set Domain Protein Methyltransferase Length = 444

Back alignment and structure

Iteration: 1

Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 12/139 (8%) Query: 5 TEAKLEP----FLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFS-DGVLLVVPLDLAI 59 TE L P F +WLQ V +K S ++G G+ + + S + V+L VP L I Sbjct: 2 TEPSLSPAVQTFWKWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWI 61 Query: 60 TPMRVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPL 119 P V IG C E+ +ILFL ER R++S WK Y +LP + + Sbjct: 62 NPDAVAASE-IGRVC------SELKPWLSVILFLIRERSREDSVWKHYFGILPQETDSTI 114 Query: 120 WFTDDELLELKGTTLYRAT 138 +++++EL EL+G+ L + T Sbjct: 115 YWSEEELQELQGSQLLKTT 133

PyMOL of 1mlv

>pdb|2H21|A Chain A, Structure Of Rubisco Lsmt Bound To Adomet Length = 440

Back alignment and structure

>pdb|3SMT|A Chain A, Crystal Structure Of Human Set Domain-Containing Protein3 Length = 497

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		480
2h21_A		440	Ribulose-1,5 bisphosphate carboxylase/oxygenase; S	7e-38
3smt_A		497	Histone-lysine N-methyltransferase SETD3; histone	7e-38
3qxy_A		449	N-lysine methyltransferase SETD6; epigenetics, pro	1e-30
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Length = 440	Back alignment and structure

 Score =  142 bits (359), Expect = 7e-38
 Identities = 89/480 (18%), Positives = 145/480 (30%), Gaps = 124/480 (25%)

Query: 4   STEAKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDG-VLLVVPLDLAITPM 62
           S    ++ F +WLQ   V      +K S  ++G G+ +  + S   V+L VP  L I P 
Sbjct: 1   SLSPAVQTFWKWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWINPD 60

Query: 63  RVLQDPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFT 122
            V     IG  C       E+     +ILFL  ER R++S WK Y  +LP    + ++++
Sbjct: 61  AVA-ASEIGRVCS------ELKPWLSVILFLIRERSREDSVWKHYFGILPQETDSTIYWS 113

Query: 123 DDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSERANSIFWTRALNIP 182
           ++EL EL+G+ L + T   K+ +                               + + +P
Sbjct: 114 EEELQELQGSQLLKTTVSVKEYVKNECLK-----------------------LEQEIILP 150

Query: 183 LPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGATST 242
               +  P   +D      I  S   S   N                             
Sbjct: 151 NKRLFPDPVTLDDFFWAFGILRSRAFSRLRNEN--------------------------- 183

Query: 243 LTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVE-RSSFHSE 301
                        +VP  D  NH                 G+    YL S++   S  + 
Sbjct: 184 -----------LVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAG 232

Query: 302 KEISISYG-NKGNEELLYLYGFVIDNNPDDYLMIHYPAEAIHSIPLSDSKALLLEEQKAQ 360
           +++ I Y  NK N EL   YGF+  N            E   S P  D K  + E     
Sbjct: 233 EQVYIQYDLNKSNAELALDYGFIEPNENRHA--YTLTLEISESDPFFDDKLDVAES---- 286

Query: 361 LRCLLPKSLLEHGFFAAGHPKDGNNDNKLEVDRISSFSWSGQRRMPSYLNKLVFPENFLT 420
                                           + + F     R           P   L 
Sbjct: 287 ----------------------------NGFAQTAYFDIFYNR---------TLPPGLLP 309

Query: 421 ALRTIAMQEDEISKVSSLLEELVGSGGERQPSDAEVRAAVWETCGDSGALQLLVDLLQAK 480
            LR +A+   +   + SL  + +    E   S             +    + + +  ++ 
Sbjct: 310 YLRLVALGGTDAFLLESLFRDTIWGHLELSVSR----------DNEELLCKAVREACKSA 359

PyMOL of 2h21

>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Length = 497	Back alignment and structure

>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Length = 449	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		480
3qxy_A		449	N-lysine methyltransferase SETD6; epigenetics, pro	100.0
3smt_A		497	Histone-lysine N-methyltransferase SETD3; histone	100.0
2h21_A		440	Ribulose-1,5 bisphosphate carboxylase/oxygenase; S	100.0
3qww_A		433	SET and MYND domain-containing protein 2; methyltr	99.15
3n71_A		490	Histone lysine methyltransferase SMYD1; heart deve	99.07
3qwp_A		429	SET and MYND domain-containing protein 3; SMYD3,SE	98.99
1n3j_A		119	A612L, histone H3 lysine methyltransferase; beta b	97.97
3f9x_A		166	Histone-lysine N-methyltransferase SETD8; methyltr	97.29
3rq4_A		247	Histone-lysine N-methyltransferase SUV420H2; suppr	97.19
3s8p_A		273	Histone-lysine N-methyltransferase SUV420H1; SET d	97.08
2w5y_A		192	Histone-lysine N-methyltransferase HRX; transcript	96.75
2f69_A		261	Histone-lysine N-methyltransferase, H3 lysine-4 sp	96.41
3ope_A		222	Probable histone-lysine N-methyltransferase ASH1L;	96.4
3ooi_A		232	Histone-lysine N-methyltransferase, H3 lysine-36 l	96.28
2qpw_A		149	PR domain zinc finger protein 2; methyltransferase	96.08
3h6l_A		278	Histone-lysine N-methyltransferase SETD2; SET doma	96.0
1h3i_A		293	Histone H3 lysine 4 specific methyltransferase; 2.	95.92
3bo5_A		290	Histone-lysine N-methyltransferase setmar; SET dom	95.65
3hna_A		287	Histone-lysine N-methyltransferase, H3 lysine-9 sp	95.55
1mvh_A		299	Cryptic LOCI regulator 4; lysine methyltransferase	95.53
2r3a_A		300	Histone-lysine N-methyltransferase SUV39H2; histon	95.39
1ml9_A		302	Histone H3 methyltransferase DIM-5; adoMet-depende	94.98
3db5_A		151	PR domain zinc finger protein 4; methyltransferase	90.48
3ep0_A		170	PR domain zinc finger protein 12; PR domain-contai	89.76
3f9x_A		166	Histone-lysine N-methyltransferase SETD8; methyltr	89.01
1n3j_A		119	A612L, histone H3 lysine methyltransferase; beta b	88.55
3dal_A		196	PR domain zinc finger protein 1; methyltransferase	87.77
3ihx_A		152	PR domain zinc finger protein 10; PRDM10, methyltr	81.3

>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*	Back alignment and structure

Probab=100.00  E-value=2.8e-55  Score=460.18  Aligned_cols=358  Identities=21%  Similarity=0.267  Sum_probs=272.9

Q ss_pred             hhCHHHHHHHHHHCCcccc-CeeEEEccCCCceEEEEccCC-CCCeEEEcccccccCccccccCCCCChhhhhhhcC-CC
Q 011673            6 EAKLEPFLQWLQVNKVELR-GCKIKYSDESKGFGIFSSNEF-SDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFED-GE   82 (480)
Q Consensus         6 ~~~~~~fl~Wl~~~G~~~~-~v~i~~~~~~~GrGl~At~dI-~ge~l~~IP~~~~lt~~~~~~~~~~g~~~~~~~~~-~~   82 (480)
                      .+++++|++|+++||+.++ +|+|...+.+.|||++|+++| +||+|++||.+++||..++.    +++.+....+. ..
T Consensus        19 ~~~~~~ll~W~~~~G~~~~~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~~ls~~~~~----~~~~l~~~~~~l~~   94 (449)
T 3qxy_A           19 LDPVACFLSWCRRVGLELSPKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAALLSQHTCS----IGGLLERERVALQS   94 (449)
T ss_dssp             CHHHHHHHHHHHHHTCEECTTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGGCBSTTTST----THHHHHHTTGGGCC
T ss_pred             cHHHHHHHHHHHHCCCeeCCceEEEecCCCceEEEEECCCCCCCCEEEEeCcHHhcChhhhh----HHHHHHHhhhhhcc
Confidence            3469999999999999997 699987654589999999999 89999999999999998763    22222211110 13


Q ss_pred             CChHHHHHHHHHHHhhcCCCCcHhhHhhcCC--CCCCCCCCCHHHHh-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011673           83 VDDRFLMILFLTVERLRKNSSWKPYLDMLPT--TFGNPLWFTDDELL-ELKGTTLYRATELQKQNLLTLYDDKVKDLVKK  159 (480)
Q Consensus        83 l~~~~~Lal~Ll~E~~~~~S~W~pYl~~LP~--~~~tPl~w~~~el~-~L~gt~l~~~~~~~~~~~~~~y~~~~~~l~~~  159 (480)
                      +++|..|+++||+|+.+.+|+|+|||++||+  ++++|+||+++|+. +|+||++...+.++++.++++|.+.+.++++.
T Consensus        95 ~~~~~~L~l~Ll~E~~g~~S~W~pYl~~LP~~~~~~~Pl~Ws~eEl~elL~gt~l~~~~~~~~~~i~~~y~~~~~~~~~~  174 (449)
T 3qxy_A           95 QSGWVPLLLALLHELQAPASRWRPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQSIVLPFMEA  174 (449)
T ss_dssp             SSSCHHHHHHHHHHHHCTTCTTHHHHTTSCCGGGCCCGGGSCHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHhCCCCchHHHHHhCCCccCCCCccccCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5689999999999998889999999999999  79999999999995 79999999999999999999999987788887


Q ss_pred             hhccC-------CChhhHHHHHHhhhcCCCCCCCCCCCcccccccccccccccccccccccccchhhcccchhhhhhhhh
Q 011673          160 LLVLD-------GDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRV  232 (480)
Q Consensus       160 ~~~~~-------~~~~~a~~~v~SRa~~~~~~~s~~fp~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~a~~~  232 (480)
                      .+.++       ..+.||+++||||+|+++.+..                                              
T Consensus       175 ~p~~f~~~~~t~e~f~wA~~~v~SRsf~~~~~~~----------------------------------------------  208 (449)
T 3qxy_A          175 HPDLFSLRVRSLELYHQLVALVMAYSFQEPLEEE----------------------------------------------  208 (449)
T ss_dssp             CTTTSCGGGCCHHHHHHHHHHHHHHCBCCCCC------------------------------------------------
T ss_pred             CccccCcccCcHHHHHHHHHHHHHHhcccccCcc----------------------------------------------
Confidence            76544       2357999999999997643311                                              


Q ss_pred             hccccCCCcccCCCCCCccccceechhhhccCCCCCCceeEEEcCCCccccCCcceeEEEeecccCCCCCeeeeccCCCC
Q 011673          233 NSQVNGATSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGTGLITGVPFSMYLLSVERSSFHSEKEISISYGNKG  312 (480)
Q Consensus       233 ~s~~~~~~~~~~~~~~~~~~~~~LvP~~D~lNH~~~~~~~~~~d~~g~~~~~~~s~~l~~~a~~~i~~GeEIfisYG~~s  312 (480)
                           + + ..    +.  ...+|||++||+||++.+++.+.++++          ++++++.++|++|||||||||+++
T Consensus       209 -----~-~-~~----~~--~~~~LvP~~D~~NH~~~~~~~~~~~~~----------~~~~~a~~~i~~Geei~~~YG~~~  265 (449)
T 3qxy_A          209 -----E-D-EK----EP--NSPVMVPAADILNHLANHNANLEYSAN----------CLRMVATQPIPKGHEIFNTYGQMA  265 (449)
T ss_dssp             ----------C----CC--CCCBBCTTGGGCEECSSCSEEEEECSS----------EEEEEESSCBCTTCEEEECCSSCC
T ss_pred             -----c-c-cc----cC--CceeEeecHHHhcCCCCCCeEEEEeCC----------eEEEEECCCcCCCchhhccCCCCC
Confidence                 0 0 00    00  136999999999999999999888742          378999999999999999999999


Q ss_pred             cHHHHHhCCccCC--CCCCCceEEeccccccCCC------C-----CchHHHHHHHHhhhhhhccCccccccccccccCC
Q 011673          313 NEELLYLYGFVID--NNPDDYLMIHYPAEAIHSI------P-----LSDSKALLLEEQKAQLRCLLPKSLLEHGFFAAGH  379 (480)
Q Consensus       313 N~eLL~~YGFv~~--~Np~D~v~i~l~~~~~~~~------~-----~~~~k~~ll~~~~~~~~~~lp~~l~~~~~~~~~t  379 (480)
                      |++||++|||+++  +||+|.+.|.+.  ++..+      +     ....|.++|+.+|+         +.+.|.|   +
T Consensus       266 n~~ll~~YGF~~~~~~N~~D~~~l~~~--~~~~~~l~~~~~~~d~~~~~~k~~~L~~~~~---------~~~~~~f---~  331 (449)
T 3qxy_A          266 NWQLIHMYGFVEPYPDNTDDTADIQMV--TVREAALQGTKTEAERHLVYERWDFLCKLEM---------VGEEGAF---V  331 (449)
T ss_dssp             HHHHHHHHSCCCCTTSCTTCEEEEEHH--HHHHHHHHTCCSHHHHHHHHHHHHHHHHTTS---------CCTTCEE---E
T ss_pred             HHHHHHhCCCCCCCCCCCCcEEEEech--hhHHHHhhcccccchhHHHHHHHHHHHhCCC---------CCCCCce---E
Confidence            9999999999998  999999998754  22210      1     22455555555432         0011111   1


Q ss_pred             CCCCCCCCcccccccccccccCCccCCcccccCCC-ChhHHHHHHHHhCCHHHHHHHH----------------------
Q 011673          380 PKDGNNDNKLEVDRISSFSWSGQRRMPSYLNKLVF-PENFLTALRTIAMQEDEISKVS----------------------  436 (480)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ll~~lr~l~~~~~e~~~~~----------------------  436 (480)
                      +                 .+           ++.+ +.+|+++||+++|+++||+.+.                      
T Consensus       332 l-----------------~~-----------~~~~~~~~ll~~LR~l~~~~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~  383 (449)
T 3qxy_A          332 I-----------------GR-----------EEVLTEEELTTTLKVLCMPAEEFRELKDQDGGGDDKREEGSLTITNIPK  383 (449)
T ss_dssp             E-----------------ES-----------SBBSSHHHHHHHHHHHHSCHHHHHHHHHC------CCCCCCCBTTTGGG
T ss_pred             e-----------------cC-----------CCCCCCHHHHHHHHHHhCCHHHHHHHHhccCcccccchhcccccccccc
Confidence            1                 11           2224 4689999999999999998872                      


Q ss_pred             ------HHHHHHhcCCCCCCCChHHHHhhhhh------hcCccchhHHHHHhhh
Q 011673          437 ------SLLEELVGSGGERQPSDAEVRAAVWE------TCGDSGALQLLVDLLQ  478 (480)
Q Consensus       437 ------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  478 (480)
                            .++...+..+++.|||+.+...++=+      -.+.+..+++-|++-+
T Consensus       384 ~~~~~~~~l~~~~~~~L~~Y~TtleeD~~lL~~~~~~~~l~~r~~~Av~vR~gE  437 (449)
T 3qxy_A          384 LKASWRQLLQNSVLLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQ  437 (449)
T ss_dssp             SCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHCHHHHHHSCHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHhhCCCcHHHHHHHHhCcccccccCHHHHHHHHHHHHH
Confidence                  34666677889999999877666543      3456667777776643

PyMOL of 3qxy

>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}	Back alignment and structure

>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*	Back alignment and structure

>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*	Back alignment and structure

>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}	Back alignment and structure

>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*	Back alignment and structure

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*	Back alignment and structure

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*	Back alignment and structure

>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}	Back alignment and structure

>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}	Back alignment and structure

>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*	Back alignment and structure

>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*	Back alignment and structure

>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}	Back alignment and structure

>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}	Back alignment and structure

>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*	Back alignment and structure

>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A	Back alignment and structure

>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}	Back alignment and structure

>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*	Back alignment and structure

>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A	Back alignment and structure

>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}	Back alignment and structure

>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*	Back alignment and structure

>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}	Back alignment and structure

>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}	Back alignment and structure

>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*	Back alignment and structure

>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*	Back alignment and structure

>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}	Back alignment and structure

>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		480
d2h2ja2		261	b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain	5e-27
d2h2ja2		261	b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain	2e-08

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 261	Back information, alignment and structure


class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

 Score =  107 bits (267), Expect = 5e-27
 Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 8   KLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEFSDG-VLLVVPLDLAITPMRVLQ 66
            ++ F +WLQ   V      +K S  ++G G+ +  + S   V+L VP  L I P  V  
Sbjct: 4   AVQTFWKWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWINPDAVAA 63

Query: 67  DPLIGPECRAMFEDGEVDDRFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDEL 126
             + G  C       E+     +ILFL  ER R++S WK Y  +LP    + ++++++EL
Sbjct: 64  SEI-GRVCS------ELKPWLSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEEL 116

Query: 127 LELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLDGDSE------RANSIFWTRALN 180
            EL+G+ L + T   K+ +        ++++     L  D         A  I  +RA +
Sbjct: 117 QELQGSQLLKTTVSVKEYVKNECLKLEQEIILPNKRLFPDPVTLDDFFWAFGILRSRAFS 176

Query: 181 IPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQR 231
                +        DL  + +   + + + +      L +       ++  
Sbjct: 177 RLRNENL-VVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPL 226

PyMOL of d2h2ja2

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 261	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		480
d2h2ja2		261	RuBisCo LSMT catalytic domain {Garden pea (Pisum s	100.0
d2g46a1		119	Viral histone H3 Lysine 27 Methyltransferase {Para	97.96
d2f69a2		171	Histone H3 K4-specific methyltransferase SET7/9 ca	97.18
d2h2ja1		176	RuBisCo LSMT C-terminal, substrate-binding domain	96.71
d1mvha_		269	SET domain of Clr4 {Fission yeast (Schizosaccharom	96.55
d1ml9a_		284	Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}	96.25
d2g46a1		119	Viral histone H3 Lysine 27 Methyltransferase {Para	89.35

>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]}	Back information, alignment and structure

class: All beta proteins
fold: beta-clip
superfamily: SET domain
family: RuBisCo LSMT catalytic domain
domain: RuBisCo LSMT catalytic domain
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=3.6e-42  Score=333.04  Aligned_cols=249  Identities=26%  Similarity=0.360  Sum_probs=197.8

Q ss_pred             hCHHHHHHHHHHCCccccCeeEEEccCCCceEEEEccCC-CCCeEEEcccccccCccccccCCCCChhhhhhhcCCCCCh
Q 011673            7 AKLEPFLQWLQVNKVELRGCKIKYSDESKGFGIFSSNEF-SDGVLLVVPLDLAITPMRVLQDPLIGPECRAMFEDGEVDD   85 (480)
Q Consensus         7 ~~~~~fl~Wl~~~G~~~~~v~i~~~~~~~GrGl~At~dI-~ge~l~~IP~~~~lt~~~~~~~~~~g~~~~~~~~~~~l~~   85 (480)
                      .+++.|++|++++|+.++++.+.....+.||||+|+++| +||+|++||..++||..++..+. .++    .+.  ...+
T Consensus         3 ~~~~~~~~W~~~~g~~~~~~~~~~~~~~~GrGl~AtrdI~~Ge~il~vP~~~~lt~~~~~~~~-~~~----~~~--~~~~   75 (261)
T d2h2ja2           3 PAVQTFWKWLQEEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVPKRLWINPDAVAASE-IGR----VCS--ELKP   75 (261)
T ss_dssp             HHHHHHHHHHHTTTSSCSSCCCEEEEETTEEEEECSSCCCTTCEEEEEEGGGCCSHHHHHTSG-GGT----TTT--TSCH
T ss_pred             hHHHHHHHHHHHCCCccCCceEeecCCCceeEEEECCcCCCCCEEEEeChHHhccHHHhhhhH-HHH----HHh--hcCc
Confidence            467889999999999998877766544589999999999 89999999999999998875442 122    221  3568


Q ss_pred             HHHHHHHHHHHhhcCCCCcHhhHhhcCCCCCCCCCCCHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-
Q 011673           86 RFLMILFLTVERLRKNSSWKPYLDMLPTTFGNPLWFTDDELLELKGTTLYRATELQKQNLLTLYDDKVKDLVKKLLVLD-  164 (480)
Q Consensus        86 ~~~Lal~Ll~E~~~~~S~W~pYl~~LP~~~~tPl~w~~~el~~L~gt~l~~~~~~~~~~~~~~y~~~~~~l~~~~~~~~-  164 (480)
                      +..+++++++|+....|.|+||++.||+.+++|++|+.++++.|+++.+...+...++.++++|.+..+.++....... 
T Consensus        76 ~~~l~~~l~~e~~~~~s~~~~y~~~lp~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (261)
T d2h2ja2          76 WLSVILFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGSQLLKTTVSVKEYVKNECLKLEQEIILPNKRLFP  155 (261)
T ss_dssp             HHHHHHHHHHHHHCTTCTTHHHHTTSCSCCSCGGGCCHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCC
T ss_pred             HHHHHHHHHHHHhCCCCchhhhhhccccccCCcccCCHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence            8999999999998889999999999999999999999999999999999999988899999999877665554433322 


Q ss_pred             -----CChhhHHHHHHhhhcCCCCCCCCCCCcccccccccccccccccccccccccchhhcccchhhhhhhhhhccccCC
Q 011673          165 -----GDSERANSIFWTRALNIPLPHSYVFPQNQEDLNKYDSINNSAELSNDHNSRGELINGLNDIKNEAQRVNSQVNGA  239 (480)
Q Consensus       165 -----~~~~~a~~~v~SRa~~~~~~~s~~fp~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~a~~~~s~~~~~  239 (480)
                           ..+.||.+++.||+|..+.+                                                       
T Consensus       156 ~~~~~~~~~~a~~~v~sr~~~~~~~-------------------------------------------------------  180 (261)
T d2h2ja2         156 DPVTLDDFFWAFGILRSRAFSRLRN-------------------------------------------------------  180 (261)
T ss_dssp             SCCCHHHHHHHHHHHHHHSBCCC---------------------------------------------------------
T ss_pred             CccCHHHHHHHHHHhhccccccccc-------------------------------------------------------
Confidence                 23568999999999843100                                                       


Q ss_pred             CcccCCCCCCccccceechhhhccCCCCCCceeEEEcCC-CccccCCcceeEEEeecccCCCCCeeeeccCC-CCcHHHH
Q 011673          240 TSTLTSTQGETLWIEGLVPGIDFCNHDLKAAATWEVDGT-GLITGVPFSMYLLSVERSSFHSEKEISISYGN-KGNEELL  317 (480)
Q Consensus       240 ~~~~~~~~~~~~~~~~LvP~~D~lNH~~~~~~~~~~d~~-g~~~~~~~s~~l~~~a~~~i~~GeEIfisYG~-~sN~eLL  317 (480)
                              .    ..+|+|++||+||+..+++.+..++. +...-......++++|.|+|++||||||+||+ ++|++||
T Consensus       181 --------~----~~~l~P~~d~~NHsc~pn~~~~~~~~~~~~~~~~~~~~~~l~A~r~I~~GEEI~isYG~~~~n~~ll  248 (261)
T d2h2ja2         181 --------E----NLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLNKSNAELA  248 (261)
T ss_dssp             -------------CCBCCTTGGGCEECSSCCSCCCCCC-----------CEEEEECSSCCCTTSBCEECSCSSCCHHHHH
T ss_pred             --------c----cccchhhhHHhhcCCCCCcccccccccCcccccCCCcEEEEEECCCCCCCCEEEEecCCCCCHHHHH
Confidence                    0    14899999999999999887654431 11100111235899999999999999999995 8999999


Q ss_pred             HhCCccCCC-CCC
Q 011673          318 YLYGFVIDN-NPD  329 (480)
Q Consensus       318 ~~YGFv~~~-Np~  329 (480)
                      .+||||.++ |||
T Consensus       249 ~~yGFv~~~~n~~  261 (261)
T d2h2ja2         249 LDYGFIEPNENRH  261 (261)
T ss_dssp             HHSSCCCSCGGGC
T ss_pred             HhCCCCCCCCCCC
Confidence            999999875 886

PyMOL of d2h2ja2

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}	Back information, alignment and structure

>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2h2ja1 a.166.1.1 (A:311-486) RuBisCo LSMT C-terminal, substrate-binding domain {Garden pea (Pisum sativum) [TaxId: 3888]}	Back information, alignment and structure

>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}	Back information, alignment and structure

>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}	Back information, alignment and structure

>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]}	Back information, alignment and structure