BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011674
(480 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356513289|ref|XP_003525346.1| PREDICTED: uncharacterized protein LOC100814174 [Glycine max]
Length = 589
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 299/471 (63%), Positives = 377/471 (80%), Gaps = 3/471 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ L+ELDLSRC KV DAG+ H+LSI LE+L +SET +TA G+ LL+SL+NLS+LDLGG
Sbjct: 112 MSSLQELDLSRCFKVNDAGINHILSIPNLERLRISETSVTAKGVKLLASLKNLSLLDLGG 171
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPV D+ L SLQVL +L Y+DLWGS++SN+GA+VL FP+L++LNLAWT VTKLP +S L
Sbjct: 172 LPVDDVALTSLQVLKRLHYIDLWGSKISNKGASVLNTFPKLTYLNLAWTSVTKLPKLSFL 231
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
E LN+SNCTIDSILE ++KAPLAK+ L+G F+NE EA LY T+ LSFLDV+NSS R
Sbjct: 232 EYLNMSNCTIDSILE--DDKAPLAKLILSGAMFMNEAEALLYANTNFLSFLDVANSSFHR 289
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
F FL++MK +EHL+LSS M+GDDSVEMVAC G NL++LNLS TR SSAG+GILAGH+P+L
Sbjct: 290 FFFLSKMKVIEHLNLSSCMMGDDSVEMVACAGGNLKSLNLSGTRVSSAGLGILAGHVPHL 349
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
EILSLS T +DD AIS++SMMPSLK +D+SNT+IKGF+ Q + + +LSL ALQNL L
Sbjct: 350 EILSLSQTPVDDTAISFISMMPSLKDVDLSNTNIKGFLHQGRTDVNSLLSLMALQNLK-L 408
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
ERLNLE TQV D L+PLS+F+EL +LSL++ASL D+SL+ LSS+ KLTNLSI DAVLTN
Sbjct: 409 ERLNLEHTQVRDEALYPLSSFQELRYLSLKSASLADISLYYLSSIPKLTNLSICDAVLTN 468
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSP 420
GL FK P +LKLLDL G WLLTED IL FC+ HP++EV HEL + P +Q G N SP
Sbjct: 469 YGLDMFKAPETLKLLDLKGCWLLTEDTILSFCRNHPQVEVRHELGTLFPVNQNGLNHSSP 528
Query: 421 SRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDS 471
SR++ + + +K+D +P+S F+DQRLKYSR+ELL LQ++SL LA +S
Sbjct: 529 SRSTSKTMQMTKKKDQIPLSPYFVDQRLKYSRDELLALQFTSLPLASSSES 579
>gi|297742329|emb|CBI34478.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/476 (63%), Positives = 371/476 (77%), Gaps = 18/476 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LKELDLSRC+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGG
Sbjct: 117 MPNLKELDLSRCIKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGG 176
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTDLVL SLQVLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+
Sbjct: 177 LPVTDLVLSSLQVLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSI 236
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
CLN+SNCTI S+ EG KA L KI+++G TF+N EAFL+IETS LSFLDVS SSL+
Sbjct: 237 ACLNMSNCTIHSMFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNS 296
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
FCFL+ MKALEHLDLS +M+GDDS++++AC+GANLRNLNLSNTR SSAGV ILAG +PNL
Sbjct: 297 FCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNL 356
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV--LSLTALQNLN 298
E +SLS T +DD AISY+SMM S+K I++SNT++KG I ++++LV LSL AL +LN
Sbjct: 357 ETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKGLIW---SDSELVWELSLAALHSLN 413
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
+++RL+LE TQV D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VL
Sbjct: 414 YVKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVL 473
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGP 418
TN GL SFKPP +LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN
Sbjct: 474 TNGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRS 533
Query: 419 SPSRTSLRASLVKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARP 468
SPS+ +KQ +P S S +DQR KYSREELL +++S+L+L P
Sbjct: 534 SPSQKG-------KKQQKLPKSQSRSKEETVIDQRWKYSREELLAMEHSTLALNFP 582
>gi|225426352|ref|XP_002266070.1| PREDICTED: uncharacterized protein LOC100261612 [Vitis vinifera]
Length = 598
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/486 (61%), Positives = 372/486 (76%), Gaps = 28/486 (5%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LKELDLSRC+K +D+G++HL+SI TL+KL +SETG+TADGI L+SSL NLSVLDLGG
Sbjct: 117 MPNLKELDLSRCIKFSDSGLRHLISIRTLQKLCISETGVTADGINLVSSLTNLSVLDLGG 176
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTDLVL SLQVLTKL+YLDLWGS++SN+GAA L +FP+LSFLN+AWT VT LP++ S+
Sbjct: 177 LPVTDLVLSSLQVLTKLQYLDLWGSKISNKGAADLVVFPKLSFLNIAWTDVTTLPDLPSI 236
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
CLN+SNCTI S+ EG KA L KI+++G TF+N EAFL+IETS LSFLDVS SSL+
Sbjct: 237 ACLNMSNCTIHSMFEGEGAKALLEKITVSGATFLNVSEAFLFIETSFLSFLDVSRSSLNS 296
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
FCFL+ MKALEHLDLS +M+GDDS++++AC+GANLRNLNLSNTR SSAGV ILAG +PNL
Sbjct: 297 FCFLSCMKALEHLDLSFTMMGDDSIQLIACIGANLRNLNLSNTRVSSAGVSILAGCVPNL 356
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV--LSLTALQNLN 298
E +SLS T +DD AISY+SMM S+K I++SNT++KG I ++++LV LSL AL +LN
Sbjct: 357 ETISLSHTPVDDVAISYISMMSSVKIINLSNTNVKGLIW---SDSELVWELSLAALHSLN 413
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
+++RL+LE TQV D L PL F++L LSL+ LTD+SL+QLSSL L NLSI D VL
Sbjct: 414 YVKRLDLEGTQVEDEALCPLLRFQQLNELSLKGTRLTDLSLYQLSSLPNLINLSIGDTVL 473
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGP 418
TN GL SFKPP +LKLLDL G WLLTEDAIL F K P+IEV HEL I PS+Q SN
Sbjct: 474 TNGGLNSFKPPATLKLLDLRGCWLLTEDAILSFHKNDPQIEVRHELVHITPSEQNASNRS 533
Query: 419 SPSRTSLRASLVKQKQDPMPMSHS-------------FLD---QRLKYSREELLELQYSS 462
SPS+ +KQ +P S S FL+ QR KYSREELL +++S+
Sbjct: 534 SPSQKG-------KKQQKLPKSQSRSKEETVIGMEFPFLESSYQRWKYSREELLAMEHST 586
Query: 463 LSLARP 468
L+L P
Sbjct: 587 LALNFP 592
>gi|255537779|ref|XP_002509956.1| protein binding protein, putative [Ricinus communis]
gi|223549855|gb|EEF51343.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 302/468 (64%), Positives = 363/468 (77%), Gaps = 6/468 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT LKELDLSR VKVTDAG++HLLSIS+LE L + ETGLTA G+ALL+SL NLSVLDLGG
Sbjct: 112 MTSLKELDLSRSVKVTDAGIRHLLSISSLEILRIPETGLTAKGVALLTSLTNLSVLDLGG 171
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTD+ L SLQVLTKLEYLDLWGS +SN G AVL++FP+LSFLNL WT VT+LP++ SL
Sbjct: 172 LPVTDMALSSLQVLTKLEYLDLWGSNISNNGVAVLQLFPKLSFLNLGWTSVTRLPSMLSL 231
Query: 121 ECLNLSNCTIDSILEGNEN--KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
E LNLSNCTI+S+LEG+ + KAPL K+ L+G TF NE EAF IE LSFLDVSNSSL
Sbjct: 232 EYLNLSNCTIESLLEGDGDGDKAPLTKVILSGATFPNEAEAFYNIEPRFLSFLDVSNSSL 291
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
F FL MK LEHLDLSS+M+GDD++E VAC+GANL NLNLS TR +SAG+ ILA H+P
Sbjct: 292 QGFYFLHDMKMLEHLDLSSTMMGDDAIEAVACIGANLTNLNLSKTRVTSAGLAILAEHVP 351
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
LE LSLS +DD+A+SY+ MM SLK +D+SNT+IKGFI+Q+G ET+L+ SL ALQ L+
Sbjct: 352 KLEYLSLSHALVDDFALSYIGMMSSLKVVDLSNTNIKGFIRQMGVETNLIPSLKALQGLS 411
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L+ LNLE TQV DA + P+S+F+EL HLSL++ASL D +L+ LSSLSKLT+L I DAVL
Sbjct: 412 GLQSLNLEHTQVRDAAVAPVSSFQELSHLSLKSASLADETLYHLSSLSKLTSLVIGDAVL 471
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGP 418
TN GL F+PP +LK+LDL G WLLTE+AI FC HP I++ HEL + ++ S
Sbjct: 472 TNCGLDLFRPPVALKMLDLRGCWLLTEEAISSFCTKHPAIKLRHELLNVSSPNESSSYRA 531
Query: 419 SPSRTSLRASLVKQKQDPM----PMSHSFLDQRLKYSREELLELQYSS 462
SPSR R V +KQ M PM F+DQRLKYSREELL LQY S
Sbjct: 532 SPSRILSRPPHVSRKQGKMPVSWPMPQHFIDQRLKYSREELLALQYQS 579
>gi|449464060|ref|XP_004149747.1| PREDICTED: uncharacterized protein LOC101203036 [Cucumis sativus]
gi|449505065|ref|XP_004162366.1| PREDICTED: uncharacterized protein LOC101225004 [Cucumis sativus]
Length = 586
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/480 (56%), Positives = 338/480 (70%), Gaps = 6/480 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT L+EL++SRC+KVTDAG++HLLSI TLEKL ++ETG+TA G+ LLSSL+ L LDLGG
Sbjct: 110 MTTLRELNVSRCLKVTDAGIRHLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGG 169
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTD L SLQVLTKL+YLDLWGS++SN G+ VL+MFP+LSFLN+AWT VTK PN+ L
Sbjct: 170 LPVTDQALSSLQVLTKLQYLDLWGSKISNSGSDVLQMFPKLSFLNIAWTSVTKFPNLPHL 229
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
ECLN+SNC IDS L+G K P K+ +G TF NE E ++ L +LD SN+SL R
Sbjct: 230 ECLNMSNCIIDSTLKGLGAKVPPRKLIASGATFSNETEDLGFVAMDALYYLDFSNASLHR 289
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
FCFL++MKA+EHLDLSS+ IGD SVE++A VG NL+ LNLS T SS+G+G LAG + NL
Sbjct: 290 FCFLSRMKAVEHLDLSSTTIGDSSVELIASVGENLKYLNLSCTAVSSSGIGSLAGKVSNL 349
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
E LSLS T +DD A+SYM+MMPSLK ID+S TDIKG+I ET V SLT LQNL+ L
Sbjct: 350 ETLSLSHTMVDDVALSYMNMMPSLKCIDLSETDIKGYIHLSAPETVKVFSLTELQNLDCL 409
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
E LNLE T V D +L PLS F++L HL LR+ S TD L LS L L LSIRDAVLTN
Sbjct: 410 EMLNLEHTHVDDESLRPLSRFRKLSHLMLRSPSFTDTVLSYLSILPNLKTLSIRDAVLTN 469
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSP 420
+FKP +L+ +DL G WLLTED + F + P+I+V HEL S+ ++ PS
Sbjct: 470 QAFDTFKPVATLQKIDLRGCWLLTEDGLSVFHRRFPQIDVRHELFHFS-SNPTSTDQPST 528
Query: 421 SRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSSTQDAMGLR 480
+ L Q M F+DQRLKYS+EELL LQ+SSL P S++ MG +
Sbjct: 529 HFIPKKIQL-NQTSRSTGMPSYFVDQRLKYSKEELLALQFSSL----PHGSTSVPEMGRK 583
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 52/215 (24%)
Query: 189 ALEHLDLSSSMIGDDSV--EMVACVGA--NLRNLNLSNT-RFSSAGVGILAG-------- 235
+E +DLS G+++V E +A +G+ L++LN+SN R SS+GV ++G
Sbjct: 62 TIEVVDLS----GENAVDSEWMAYLGSFRYLQSLNVSNCHRLSSSGVWTISGMTTLRELN 117
Query: 236 -------------HL---PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
HL P LE L ++ T I + ++ +S + +L F+D+ +
Sbjct: 118 VSRCLKVTDAGIRHLLSIPTLEKLCIAETGITAHGVTLLSSLKTLVFLDLGGLPV----- 172
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
TD LS +LQ L L+ L+L +++S++ L F +L L++ S+T
Sbjct: 173 -----TDQALS--SLQVLTKLQYLDLWGSKISNSGSDVLQMFPKLSFLNIAWTSVT---- 221
Query: 340 HQLSSLSKLTNLSIRDAVL--TNSGLGSFKPPRSL 372
+ +L L L++ + ++ T GLG+ PPR L
Sbjct: 222 -KFPNLPHLECLNMSNCIIDSTLKGLGAKVPPRKL 255
>gi|297803756|ref|XP_002869762.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
gi|297315598|gb|EFH46021.1| hypothetical protein ARALYDRAFT_492485 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/473 (51%), Positives = 314/473 (66%), Gaps = 13/473 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ELDLSRC KVTDAG+KHL S+ L+KLW+S+TG+T GI+LL+SLQ LS+LDLGG
Sbjct: 110 LTSLTELDLSRCFKVTDAGIKHLQSVVNLKKLWISQTGVTKVGISLLASLQKLSLLDLGG 169
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTD L +LQ LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI L
Sbjct: 170 LPVTDHNLIALQELTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHL 229
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
ECL+++ CTI S + + + A L K+ L+G F E EA + S +++LDVS +SL
Sbjct: 230 ECLHMNMCTIVSEPKTHCSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQN 289
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
F F+ M LEHLDLSS+ GDDSV VACVG NL+NLN+S+T+ +SAGVG LAGH+P L
Sbjct: 290 FSFIETMINLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTKITSAGVGNLAGHVPQL 349
Query: 241 EILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
E SLS T +DD +I +S MMP +K +D+ T I+ E SL ALQ+L
Sbjct: 350 ETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIR--------EEQAEPSLAALQSLTS 401
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L+ L+LE + D L LS+ L HLSLR+ SLTD +LH LSSL L +L +RDAVLT
Sbjct: 402 LKTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVLT 461
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQ----IGS 415
++GL F+PP+ L+ LDL G WLLT+D I CK +P I+V HE DQ S
Sbjct: 462 SNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKRYPHIKVRHEHDDSSSLDQNQFLPRS 521
Query: 416 NGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARP 468
+ P R S ++ + + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 522 STPQSFGKVPRRSNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 574
>gi|186701224|gb|ACC91251.1| leucine-rich repeat family protein [Arabidopsis halleri]
Length = 600
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/477 (52%), Positives = 321/477 (67%), Gaps = 7/477 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ELDLSRC KVTDAG+KHL S+S L+KLW+S+TG+T GI+LL+SL+ LS+LDLGG
Sbjct: 110 LTSLTELDLSRCWKVTDAGIKHLQSVSNLKKLWISQTGVTKVGISLLASLKKLSLLDLGG 169
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTD L +LQ LTKLEYLD+WGS V+N+GA + F LSFLNL+WT VT+ PNI L
Sbjct: 170 LPVTDHNLIALQALTKLEYLDIWGSNVTNQGAISILQFSNLSFLNLSWTSVTQTPNIPHL 229
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
ECL+++ CTI S + + + A L K+ L+G F E EA + S +++LDVS +SL
Sbjct: 230 ECLHMNMCTIVSEPKTHSSLASLKKLVLSGANFSAETEALSFTNKSSITYLDVSKTSLQN 289
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
F FL M LEHLDLSS+ GDDSV VACVG NLRNLN+S T+ +SAGVG LAGH+P L
Sbjct: 290 FSFLETMINLEHLDLSSTAFGDDSVGFVACVGENLRNLNVSETKITSAGVGNLAGHVPQL 349
Query: 241 EILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKGFI-QQVGAETDLVLSLTALQNLN 298
E SLS T +DD +I +S MMP +K +D+ T I+GFI QQ E SL ALQ+L
Sbjct: 350 ETFSLSQTFVDDLSILLISTMMPCVKALDLGMTSIRGFILQQSPQEEQAEPSLAALQSLT 409
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L+ L+LE + D L LS+ L HLSLR+ SLTD +LH LSSL L +L +RDAVL
Sbjct: 410 SLKTLSLEHPYLGDTALSALSSLTGLTHLSLRSTSLTDSTLHHLSSLPNLVSLGVRDAVL 469
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE--LSVICPSDQIGSN 416
T++GL F+PP+ L+ LDL G WLLT+D I CK +P I+V HE +S +Q+
Sbjct: 470 TSNGLEKFRPPKRLRTLDLKGCWLLTKDDIAGLCKRYPHIKVRHEHDISSSLDQNQLLPR 529
Query: 417 GPSPSRTSLRASLVKQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARPDD 470
+P S + Q P + + SFLDQR+KY+REEL+ LQ S LS P +
Sbjct: 530 SSTPQTQSFGKLPRRNNQRPESYVAVPRSFLDQRVKYNREELVALQKSPLSQLLPRE 586
>gi|326513166|dbj|BAK06823.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/463 (49%), Positives = 318/463 (68%), Gaps = 5/463 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ LKELDLSRC K+TDAG+KH++SI +LEKL LSETGLT +G+ L+S+L+ L +LDLGG
Sbjct: 144 MSMLKELDLSRCSKITDAGIKHIVSIDSLEKLHLSETGLTDNGVMLISALKGLILLDLGG 203
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ +TD LRSLQVLT+LE+LD+WGS++++ GA++L+ F L FLN++WT VT+LP++ ++
Sbjct: 204 IHMTDKALRSLQVLTQLEHLDVWGSEITDEGASILEAFTGLRFLNVSWTHVTRLPHLPNM 263
Query: 121 ECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
+ LN+SNCTI SI G+ E PL K + + +F + E F I S SFLD+S SLS
Sbjct: 264 KYLNMSNCTIYSICGGDSEVHIPLQKFTASAASFGDIDEVFSSIVASSFSFLDMSGCSLS 323
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
L +MK+LEHLD+S + + DD+VE VA +G LR L+L NT +S + ILAG +PN
Sbjct: 324 NLYGLQKMKSLEHLDISLNRVTDDAVEYVANIGMKLRYLSLKNTGITSQALCILAGTVPN 383
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LSL+ T+IDD A+ Y+SMMPSL+ ID+S+T IKGF +V A ++ + SL L++L +
Sbjct: 384 LASLSLAYTKIDDSALVYISMMPSLRVIDLSHTTIKGFT-RVEANSEKIPSLPLLEHLIY 442
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LE LNLE +SD + P+++F+ L +L L++ L+D LH LSS S L +L +VL+
Sbjct: 443 LESLNLEDAPLSDEVIPPMTSFRALKYLYLKSDFLSDPGLHALSSASNLIHLGFCGSVLS 502
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 419
NSGL F PP L +LDL G W+LT DAI F + HP IEV HEL+ ++ G++
Sbjct: 503 NSGLLEFVPPAQLHVLDLSGCWILTGDAISTFRRHHPSIEVRHELTQELQPNRGGTSQVH 562
Query: 420 PSRTSLRASLVKQKQDPMPMSHS---FLDQRLKYSREELLELQ 459
SR RA HS F+DQR+KYSREE++E+Q
Sbjct: 563 KSRQLPRAKTKVVNSSADSRRHSGIFFVDQRIKYSREEMMEIQ 605
>gi|42567079|ref|NP_194115.3| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|20466546|gb|AAM20590.1| unknown protein [Arabidopsis thaliana]
gi|22136448|gb|AAM91302.1| unknown protein [Arabidopsis thaliana]
gi|51971383|dbj|BAD44356.1| putative protein [Arabidopsis thaliana]
gi|332659411|gb|AEE84811.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/472 (50%), Positives = 310/472 (65%), Gaps = 4/472 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ELDLSRC KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGG
Sbjct: 110 LTSLTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGG 169
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
LPVTD L SLQ LTKLEYLD+WGS V+N+GA + F LSFLNL+WT +T+ PNI L
Sbjct: 170 LPVTDQNLISLQALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHL 229
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
ECL+++ CTI S + + + A L K+ L+G F E E+ + S +++LDVS +SL
Sbjct: 230 ECLHMNTCTIVSEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKN 289
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
F FL M LEHLDLSS+ GDDSV VACVG NL+NLN+S+T+ + +GVG LAGH+P L
Sbjct: 290 FSFLETMFNLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQL 349
Query: 241 EILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
E LS+S T +DD +I +S MP +K +D+ GF + + + SL ALQ+L
Sbjct: 350 ETLSMSQTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTS 409
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LE L+LE + D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT
Sbjct: 410 LETLSLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLT 469
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 419
++GL F+PP L+ LDL G WLLT+D I CK +P I+V HE + DQ S
Sbjct: 470 SNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQNQLLPRS 529
Query: 420 PSRTSLRASLVKQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARP 468
+ S + Q P + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 530 STPQSFGKVARRNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 581
>gi|215769345|dbj|BAH01574.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 483
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/469 (47%), Positives = 316/469 (67%), Gaps = 8/469 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LKELDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG
Sbjct: 1 MRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGG 60
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ TD LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L
Sbjct: 61 VRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTL 120
Query: 121 ECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
CLN+SNCTI SI G + L K+ ++ +F N E F I S L++LD+S+ S S
Sbjct: 121 RCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSS 180
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FL M+ LEHLDLS S I D++E +A +G NL+ L+LSN+ +S + +LAG +P+
Sbjct: 181 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPS 240
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IKGF+ + + VLSL+AL+ L +
Sbjct: 241 LTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVK---VLSLSALEELKY 297
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LE LNL TQ+ D + PL++ + L +L L++ L+D +LH LSS S L +L +L+
Sbjct: 298 LESLNLNNTQLMDDVIPPLASLRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILS 357
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS---N 416
+GL F PP +L++LDL G W+LT DAI FC HP IEV HEL ++ G+ +
Sbjct: 358 TTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHPVIEVRHELIQELQANYGGTSHLH 417
Query: 417 GPSPSRTSLRASLVKQKQDPMPMSH-SFLDQRLKYSREELLELQYSSLS 464
S ++A + K P ++ F+D+R+KYS+EE++ELQ+ + S
Sbjct: 418 KSSRQPQQVKAKVAKSSAGPSRLAEICFVDERIKYSKEEMMELQHQAKS 466
>gi|218196286|gb|EEC78713.1| hypothetical protein OsI_18882 [Oryza sativa Indica Group]
Length = 601
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/469 (47%), Positives = 317/469 (67%), Gaps = 8/469 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ LKELDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG
Sbjct: 119 MSTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGG 178
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ TD LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L
Sbjct: 179 VRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILLTL 238
Query: 121 ECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
CLN+SNCTI SI G + L K+ ++ +F N E F I S L++LD+S+ S S
Sbjct: 239 RCLNMSNCTIHSICNGEFQVLIHLEKLVISAASFGNIDEVFSSILPSSLTYLDMSSCSSS 298
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FL M+ LEHLDLS S I D++E +A +G NL L+LSN+ +S + +LAG +P+
Sbjct: 299 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLMFLSLSNSEVTSQALCVLAGTVPS 358
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IKGF+ + + VLSL+AL+ L +
Sbjct: 359 LTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIKGFMMENSVK---VLSLSALEELKY 415
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LE LNL TQ+ D + PL++F+ L +L L++ L+D +LH LSS S L +L +L+
Sbjct: 416 LESLNLNNTQLMDDVIPPLASFRALKYLFLKSDFLSDPALHALSSASNLIHLGFCGNILS 475
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS---N 416
+GL F PP +L++LDL G W+LT DAI FC HP IEV HEL ++ G+ +
Sbjct: 476 TTGLRKFVPPATLRMLDLSGCWILTGDAISAFCTCHPVIEVRHELIQELQANYGGTSHLH 535
Query: 417 GPSPSRTSLRASLVKQKQDPMPMSH-SFLDQRLKYSREELLELQYSSLS 464
S ++A + K P ++ F+D+++KYS+EE++ELQ+ + S
Sbjct: 536 KSSRQPQQVKAKVAKSLAGPSRLADICFVDEKIKYSKEEMMELQHQAKS 584
>gi|413949465|gb|AFW82114.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 606
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 224/478 (46%), Positives = 309/478 (64%), Gaps = 17/478 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LKELDLSRC K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG
Sbjct: 121 MNTLKELDLSRCKKISDAGIKHIVTIESLEKLHLSETELTDNGVMLISSLTNLSFLDLGG 180
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ +TD L+SLQVLTKLE+LD+WGS+ +N GA+ LK F RL LNLA T V L +
Sbjct: 181 ILMTDKTLQSLQVLTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTT 240
Query: 121 ECLNLSNCTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
LN+SNC I SI + +E PL ++ TF N + F I+ S L LD+S+ LS
Sbjct: 241 SYLNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLS 300
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FL +MK LEHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PN
Sbjct: 301 NLSFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPN 360
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ-QVGAETDLVLSLTALQNLN 298
L LSL+ T+IDD A++Y+ M+P L+ ID+S T IKGFI +V +E +LS++A ++L
Sbjct: 361 LTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKGFIHTEVNSEK--LLSMSAFEHLK 418
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
+LE LNLE T +S + PL++F L +L L++ L+D +LH LS+ S L +L R +L
Sbjct: 419 YLESLNLEDTPLSAEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNIL 478
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNG 417
++ GL F PP +L +LDL G W+LT DAI F K HP IE+ HEL + + GS
Sbjct: 479 SSFGLLQFVPPVTLCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQF 538
Query: 418 PSPSRTSLRASLVKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARPD 469
P R R+ VK + S F+D+R+KYS+EE +ELQ LA+P+
Sbjct: 539 RKPRRR--RSPHVKAEVGNSFAGSSRLHDIRFVDERIKYSKEEFVELQ----GLAKPN 590
>gi|242089917|ref|XP_002440791.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
gi|241946076|gb|EES19221.1| hypothetical protein SORBIDRAFT_09g006650 [Sorghum bicolor]
Length = 608
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 213/470 (45%), Positives = 300/470 (63%), Gaps = 15/470 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+LDLSRC K++DAG+KH+++I +LEKL LSET LT +G+ L+SSL NLS LDLGG
Sbjct: 121 MNTLKDLDLSRCKKISDAGIKHIVTIESLEKLHLSETELTNNGVMLISSLTNLSFLDLGG 180
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ +TD L+SLQVLT+LE+LD+WGS+ +N GA+ LK F RL FLNLA T V L +
Sbjct: 181 ILMTDKSLQSLQVLTRLEHLDIWGSETTNEGASTLKSFARLIFLNLALTRVNHLSIPPTT 240
Query: 121 ECLNLSNCTIDSIL-EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
CLN+SNC I SI E +E PL ++ TF N + F I+ S L+ LD+S+ LS
Sbjct: 241 RCLNMSNCEIHSICDEDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLTHLDLSSCKLS 300
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FL +MK LEHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PN
Sbjct: 301 NLSFLEKMKNLEHLDLSYNIITDGAIEHIAKLGTNLQYLSLKNTGITSQALCILAGTVPN 360
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL-----SLTAL 294
L LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG E L ++A
Sbjct: 361 LTSLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG----CALENKFYLMAGFTHMSAF 416
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
++L +LE LNLE T +S + PL++ L +L L++ L+D +LH LS+ S L +L
Sbjct: 417 EHLKYLESLNLEDTPLSAEVIPPLASLAALKYLYLKSDFLSDPALHALSAASNLIHLGFC 476
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI- 413
+L++SGL F PP +L +LDL G W+LT +AI F K HP IE+ HEL ++ +
Sbjct: 477 GNILSSSGLLQFVPPTTLCVLDLSGCWILTGEAISTFRKRHPTIELRHELMEEVQANFVG 536
Query: 414 GSNGPSPSRTS---LRASLVKQKQDPMPMSH-SFLDQRLKYSREELLELQ 459
GS P R +++ + P + F+D+R+KYS+EE +ELQ
Sbjct: 537 GSQFRKPRRRQSPHVKSEVGNSFAGPSRLRDICFVDERIKYSKEEFMELQ 586
>gi|357134265|ref|XP_003568738.1| PREDICTED: uncharacterized protein LOC100844673 [Brachypodium
distachyon]
Length = 547
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 210/461 (45%), Positives = 301/461 (65%), Gaps = 12/461 (2%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
++E+DLS + V + +L S L L L++ + S++ LS DLGG+ +
Sbjct: 74 VEEIDLSGNIAVDAEWLAYLGSFRYLRVLKLADCKNVNN-----SAVWALS--DLGGIHM 126
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
TD LRSLQVLT+LE+LD+WGS+++N GA+VLK F RLSFLN++WT VT+LP + +L+ L
Sbjct: 127 TDKTLRSLQVLTRLEHLDIWGSEITNEGASVLKAFTRLSFLNVSWTHVTRLPPLPNLQHL 186
Query: 124 NLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
N+SNCTI SI +G+ E PL K ++ +F N E F I+ S L +LD+S SLS
Sbjct: 187 NMSNCTIHSIRDGDSEVNVPLEKFTVCAASFGNIFEVFSSIQGSSLLYLDMSGCSLSNLH 246
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+MK +EHLDLS S I D +++ VA +G NLR+L+L NT +S ILAG +PNL
Sbjct: 247 IFEKMKHIEHLDLSFSRITDAAIQHVANIGMNLRHLSLKNTGITSQAPCILAGTVPNLSS 306
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
LSL+ T+IDD A++Y+SMMPSL+ ID+S+T IKGF V ++ + S+ L++L +LE
Sbjct: 307 LSLAYTEIDDSALAYISMMPSLRVIDLSHTSIKGFT-CVEVNSEKIPSMPPLEHLMYLES 365
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNLE T +SD + PL++F+ + +L L++ L+D +LH LSS S LT+L +L++SG
Sbjct: 366 LNLEDTALSDEVIPPLASFRAIKYLYLKSDFLSDPALHALSSASNLTHLGFCGNILSDSG 425
Query: 363 LGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSR 422
L F PP L++LDL G W+LT DA+ FCK HP IEV HEL + G++ SR
Sbjct: 426 LLQFVPPAKLRVLDLSGCWILTGDAVSTFCKHHPVIEVTHELWQELQPNSGGTSQVHKSR 485
Query: 423 TSLRAS--LVKQKQDPMPMSH-SFLDQRLKYSREELLELQY 460
+A V ++ P +S F+D+R+KYSREEL+ELQ+
Sbjct: 486 QLPKAKTEAVNRQAGPSRLSGIFFVDERIKYSREELMELQH 526
>gi|148909462|gb|ABR17829.1| unknown [Picea sitchensis]
Length = 455
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 204/440 (46%), Positives = 285/440 (64%), Gaps = 16/440 (3%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+A LS L +L+ LDLGGLPVTDLV+ SLQ LT+L LD+WGS++SN GA +LK FP+L+
Sbjct: 1 MARLSVLTSLTSLDLGGLPVTDLVVSSLQALTQLHQLDMWGSKISNEGAILLKAFPKLNC 60
Query: 104 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINEREAFLY 162
LNLAWT VT+LP + SL LN+S CTI+SIL+G E + L + +G +FI+
Sbjct: 61 LNLAWTNVTRLPALVSLTSLNMSKCTIESILDGLEEPEISLLTLHFSGASFIDAYRVLSC 120
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
+ L+FLD+S SS+ FL M LE LDLS + + D S+ VA +GANL++LNLS
Sbjct: 121 LHAQNLTFLDLSGSSIDNVSFLAGMNRLESLDLSCTGVIDSSMNSVADIGANLKHLNLST 180
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
TR +S + ILAG++P LE +SLS T +DD A++Y+ ++ +L+ I +S T+IKGFI
Sbjct: 181 TRVTSDALAILAGNVPKLEFISLSHTMVDDNALAYLGLISALRNISLSFTNIKGFIHVGE 240
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
+E++ SL +L+ L HLE L+LE T +SD PL KEL HLSLR+ L+D+SLH +
Sbjct: 241 SESNPQFSLASLRKLEHLEILDLENTHISDLACQPLIFLKELYHLSLRSDFLSDISLHTV 300
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
SSL KL LSI+ AV+T +GL SF PP L++LDL WLLT + IL+F K +P++++ H
Sbjct: 301 SSLPKLKYLSIQGAVVTKTGLCSFVPPPLLQVLDLSDCWLLTMEGILEFWKTYPQLQLRH 360
Query: 403 ELSVICPSDQIG-SNGPSPSRTSLRASLVKQKQ-----------DPMPMSHSFLDQRLKY 450
EL V DQ S G S ++ A VKQ + P F+D+R+KY
Sbjct: 361 ELIVTIFEDQTHRSRGNMFSYETMEAFTVKQGRKSRSRASSSSLHEKPTQRKFIDERIKY 420
Query: 451 SREELLELQ---YSSLSLAR 467
S+ ELL ++ +S+LS +
Sbjct: 421 SKSELLRIRAGVHSALSFSE 440
>gi|224058283|ref|XP_002299476.1| predicted protein [Populus trichocarpa]
gi|222846734|gb|EEE84281.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 208/283 (73%), Gaps = 1/283 (0%)
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
+E+LDLSSSMIGDDS+E VA +GA LRNLNL TR +SAGV IL GH+P LE LSLS T
Sbjct: 1 MEYLDLSSSMIGDDSIEAVASIGAILRNLNLGKTRVTSAGVAILVGHVPKLENLSLSHTL 60
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
+DD A+SY+ MMPSLK +D++NT I GFI Q GA +L+ SLTAL +L LE LNLE
Sbjct: 61 VDDLAMSYIGMMPSLKLVDLNNTIINGFIHQDGAGPNLISSLTALHSLKGLESLNLECAN 120
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+ DA + PLS F+EL LSL++ SLTD+SL+ LSSL K+ NL IRDAVLT+SGL SF+PP
Sbjct: 121 IKDAAVDPLSNFQELRLLSLKSPSLTDISLYHLSSLPKIRNLGIRDAVLTDSGLFSFRPP 180
Query: 370 RSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASL 429
+L++LDL G WLLTEDAIL F K HP IE+ HE V+ SDQ + +P RT LR
Sbjct: 181 ATLEMLDLRGCWLLTEDAILSFRKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQ 239
Query: 430 VKQKQDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSS 472
V QKQ+ + +S F+DQRLKY+REELL LQ+ S SL P D S
Sbjct: 240 VNQKQEKLIVSQYFIDQRLKYTREELLALQFQSSSLGSPFDKS 282
>gi|308044417|ref|NP_001183765.1| hypothetical protein [Zea mays]
gi|238014428|gb|ACR38249.1| unknown [Zea mays]
gi|413949466|gb|AFW82115.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 547
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 284/476 (59%), Gaps = 28/476 (5%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
++E+DLS + V + +L S L L L++ + D + LS GG+
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADCKNINNDAVWSLS----------GGIL 123
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+TD L+SLQVLTKLE+LD+WGS+ +N GA+ LK F RL LNLA T V L +
Sbjct: 124 MTDKTLQSLQVLTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSY 183
Query: 123 LNLSNCTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
LN+SNC I SI + +E PL ++ TF N + F I+ S L LD+S+ LS
Sbjct: 184 LNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNL 243
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
FL +MK LEHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL
Sbjct: 244 SFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLT 303
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ-QVGAETDLVLSLTALQNLNHL 300
LSL+ T+IDD A++Y+ M+P L+ ID+S T IKGFI +V +E +LS++A ++L +L
Sbjct: 304 SLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKGFIHTEVNSEK--LLSMSAFEHLKYL 361
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
E LNLE T +S + PL++F L +L L++ L+D +LH LS+ S L +L R +L++
Sbjct: 362 ESLNLEDTPLSAEVIPPLASFATLKYLYLKSDFLSDPALHALSAASNLIHLGFRGNILSS 421
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQI-GSNGPS 419
GL F PP +L +LDL G W+LT DAI F K HP IE+ HEL + + GS
Sbjct: 422 FGLLQFVPPVTLCVLDLSGCWILTGDAISTFRKRHPTIELRHELLHEVEENFVGGSQFRK 481
Query: 420 PSRTSLRASLVKQKQDPMPMSHS------FLDQRLKYSREELLELQYSSLSLARPD 469
P R R+ VK + S F+D+R+KYS+EE +ELQ LA+P+
Sbjct: 482 PRRR--RSPHVKAEVGNSFAGSSRLHDIRFVDERIKYSKEEFVELQ----GLAKPN 531
>gi|222630606|gb|EEE62738.1| hypothetical protein OsJ_17541 [Oryza sativa Japonica Group]
Length = 973
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/276 (52%), Positives = 199/276 (72%), Gaps = 1/276 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LKELDLSRC K++DAG+KH+ SI +LEKL +S+TGLT +G+ +SSL NL +LDLGG
Sbjct: 661 MRTLKELDLSRCSKISDAGIKHIASIESLEKLHVSQTGLTDNGVMAISSLINLRLLDLGG 720
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ TD LRSLQVLT+LE+LD+WGS+++N GA+VL F LSFLN++WT VT LP + +L
Sbjct: 721 VRFTDKALRSLQVLTQLEHLDIWGSEITNEGASVLIAFTSLSFLNISWTRVTCLPILPTL 780
Query: 121 ECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
CLN+SNCTI SI G + L K+ ++ +F N E F I S L++LD+S+ S S
Sbjct: 781 RCLNMSNCTIHSICNGEFQVLIHLEKLIISAASFGNIDEVFSSILPSSLTYLDMSSCSSS 840
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FL M+ LEHLDLS S I D++E +A +G NL+ L+LSN+ +S + +LAG +P+
Sbjct: 841 NLYFLGNMRNLEHLDLSYSRIISDAIEYIANIGMNLKFLSLSNSEVTSQALCVLAGTVPS 900
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
L LSL+ T+IDD A+ Y+SMMPSL+ +++S T IK
Sbjct: 901 LTTLSLAHTKIDDSALLYISMMPSLRILNLSRTCIK 936
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 64/346 (18%)
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRN 217
AF Y+ +L D N + S L+ M+ L+ LDLS S I D ++ +A + +L
Sbjct: 635 AFRYLR--VLKLADCKNVNSSAVWALSGMRTLKELDLSRCSKISDAGIKHIASI-ESLEK 691
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L++S T + GV ++ L NL +L L G + D A+ + ++ L+ +DI ++I
Sbjct: 692 LHVSQTGLTDNGVMAISS-LINLRLLDLGGVRFTDKALRSLQVLTQLEHLDIWGSEIT-- 748
Query: 278 IQQVGAETDLVLSLTALQNLN-HLERLN-------LEQTQVSDATLFPL--STFKELIHL 327
GA ++++ T+L LN R+ L +S+ T+ + F+ LIHL
Sbjct: 749 --NEGAS--VLIAFTSLSFLNISWTRVTCLPILPTLRCLNMSNCTIHSICNGEFQVLIHL 804
Query: 328 S---LRNASLTDVSLHQLSSL--SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
+ AS ++ SS+ S LT L + + ++S L R+L+ LDL +
Sbjct: 805 EKLIISAASFGNID-EVFSSILPSSLTYLDM--SSCSSSNLYFLGNMRNLEHLDLSYSRI 861
Query: 383 LTEDAI---------LQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 433
++ DAI L+F + L V+ G PS T+L SL K
Sbjct: 862 IS-DAIEYIANIGMNLKFLSLSNSEVTSQALCVLA--------GTVPSLTTL--SLAHTK 910
Query: 434 QDP--------MP------MSHSFL-DQRLKYSREELLELQYSSLS 464
D MP +S + + D+R+KYS+EE++ELQ+ + S
Sbjct: 911 IDDSALLYISMMPSLRILNLSRTCIKDERIKYSKEEMMELQHQAKS 956
>gi|4972088|emb|CAB43884.1| putative protein [Arabidopsis thaliana]
gi|7269233|emb|CAB81302.1| putative protein [Arabidopsis thaliana]
Length = 364
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 210/348 (60%), Gaps = 4/348 (1%)
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
++ CTI S + + + A L K+ L+G F E E+ + S +++LDVS +SL F FL
Sbjct: 1 MNTCTIVSEPKTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFL 60
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
M LEHLDLSS+ GDDSV VACVG NL+NLN+S+T+ + +GVG LAGH+P LE LS
Sbjct: 61 ETMFNLEHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLS 120
Query: 245 LSGTQIDDYAISYMS-MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+S T +DD +I +S MP +K +D+ GF + + + SL ALQ+L LE L
Sbjct: 121 MSQTFVDDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETL 180
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+LE + D L LS+ L HLSL + SLTD +LH LSSL L +L +RD VLT++GL
Sbjct: 181 SLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTDSTLHHLSSLPNLVSLGVRDGVLTSNGL 240
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRT 423
F+PP L+ LDL G WLLT+D I CK +P I+V HE + DQ S +
Sbjct: 241 EKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYPHIKVRHEHADSSSLDQNQLLPRSSTPQ 300
Query: 424 SLRASLVKQKQDP---MPMSHSFLDQRLKYSREELLELQYSSLSLARP 468
S + Q P + + SFLDQR+KY+REEL+ LQ S LS P
Sbjct: 301 SFGKVARRNNQRPESSVAVPRSFLDQRVKYNREELVALQNSPLSQLLP 348
>gi|302802011|ref|XP_002982761.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
gi|300149351|gb|EFJ16006.1| hypothetical protein SELMODRAFT_52320 [Selaginella moellendorffii]
Length = 516
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 243/404 (60%), Gaps = 12/404 (2%)
Query: 9 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+ RC K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD +
Sbjct: 116 IDRCSKITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHV 175
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
SL VL L L LWGS ++N GA +L+ FPRL LNLAWT V+ +P++ + LNLS+C
Sbjct: 176 SSLLVLQLLIDLQLWGSSITNEGANMLRGFPRLEILNLAWTKVSVVPSMPRVSQLNLSHC 235
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ S+ +E + L ++ L+G T + LS L++S ++L+ FL +K
Sbjct: 236 VVLSV---SEEGSALDQLRLSGATIQDPLRVLHSHSLPELSVLELSATNLAALTFLGSLK 292
Query: 189 ALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+ LDLSS + D++ ++A NL++L+LS+TR S GV +L GH+P LE LSL G
Sbjct: 293 RVVKLDLSSMPSVSSDTMNLLAKCARNLKHLDLSDTRVGSEGVAVLTGHVPALEHLSLRG 352
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGF-------IQQVGAETDLVL-SLTALQNLNH 299
T I D Y+ +MP L ID+SNT + G + A D S+ LQ L++
Sbjct: 353 TSITDSVFGYLGLMPLLIDIDLSNTSLTGMPVFEFTKVYYTCAPVDSSFWSVLHLQQLHN 412
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L RL+L +T+ SD + L+ L HL L LTD SLH+LS+L L +L+ + VLT
Sbjct: 413 LRRLDLRRTRFSDKSCKRLACLVRLTHLLLCAEFLTDASLHELSALPNLRSLAFQGTVLT 472
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 403
++GL S KPP L+ LDL WLLTE +LQFC + + V H+
Sbjct: 473 DAGLRSLKPPPPLEELDLTDCWLLTEGCLLQFCDYYRSVTVKHD 516
>gi|168052598|ref|XP_001778727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669846|gb|EDQ56425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 643
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/407 (41%), Positives = 244/407 (59%), Gaps = 2/407 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T ++ELDL+RC K++D + H+LS L KL L+ETGLT G+ LL L L +LDLGG
Sbjct: 119 LTAMEELDLARCRKISDDAVPHILSFKMLRKLGLAETGLTTKGLLLLPGLSRLVLLDLGG 178
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
PVTD L S Q L LE+LDLWGS+V+N GA L F L +LNLA T VT +P ++SL
Sbjct: 179 CPVTDADLISFQALGMLEHLDLWGSKVTNMGARCLSSFKTLKYLNLAMTAVTAIPQLNSL 238
Query: 121 ECLNLSNCTIDSIL-EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
LNL NC ++SI +G + + L ++ L+G + ++ ++ T L LD+++S ++
Sbjct: 239 LSLNLCNCDVESIYGDGTFSDSLLRELFLSGAS-LSLKDVISGSNTRNLHLLDLASSRVN 297
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
+ L LDL ++ + ++ + +G NLR ++LS T+ S GVG +AGH PN
Sbjct: 298 DLDAFVHIPKLAILDLRATGLTNELMLKFQGLGDNLRWIDLSYTKIDSEGVGAIAGHAPN 357
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
+E LSL+ T +DD Y+ P L+ +++ + + GF+ E + L+ L+ L H
Sbjct: 358 VEQLSLNHTPVDDNVFIYLVHFPVLQSLNLGGSKVNGFMTVGSEEFQQISVLSYLEQLQH 417
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L RL++ T V DA L L +L HL + + SL+D L QLSS L L I A +T
Sbjct: 418 LRRLDMRYTGVGDAALHGLKNLVQLSHLHIHSNSLSDECLQQLSSFPNLVCLGIGGATIT 477
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 406
GL S+KPP L+ LDL WLLTE A+L FC+ HPRI VW+E +V
Sbjct: 478 ADGLLSYKPPSLLEELDLTDCWLLTEPALLDFCEAHPRIMVWNEKTV 524
>gi|413949467|gb|AFW82116.1| hypothetical protein ZEAMMB73_510951 [Zea mays]
Length = 343
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 168/275 (61%), Gaps = 12/275 (4%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLP 62
++E+DLS + V + +L S L L L++ ++ N +V L GG+
Sbjct: 74 VEEVDLSGFLSVNSEWLAYLGSFRYLRVLKLADC----------KNINNDAVWSLSGGIL 123
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+TD L+SLQVLTKLE+LD+WGS+ +N GA+ LK F RL LNLA T V L +
Sbjct: 124 MTDKTLQSLQVLTKLEHLDIWGSETTNEGASALKSFARLLSLNLALTRVNHLSIPPTTSY 183
Query: 123 LNLSNCTIDSILE-GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
LN+SNC I SI + +E PL ++ TF N + F I+ S L LD+S+ LS
Sbjct: 184 LNMSNCEIHSICDVDSEVPVPLENFIVSAATFGNIDKVFSSIQASSLIHLDLSSCKLSNL 243
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
FL +MK LEHLDLS ++I D ++E +A +G NL+ L+L NT +S + ILAG +PNL
Sbjct: 244 SFLEKMKNLEHLDLSYNIITDGAIEHIAKIGTNLQYLSLKNTGITSQALCILAGTVPNLT 303
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LSL+ T+IDD A++Y+ M+P L+ ID+S T IKG
Sbjct: 304 SLSLANTKIDDSALAYIGMIPLLRTIDLSQTSIKG 338
>gi|452822896|gb|EME29911.1| leucine-rich repeat family protein [Galdieria sulphuraria]
Length = 588
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 70/414 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGL- 61
L LDL+ CV++T G++HL + L+ L L S +T++G++ L++L NL+ LD+
Sbjct: 160 LTYLDLAGCVQITSEGLQHLAGLKYLKVLVLKSCKQITSEGLSYLANLHNLTRLDIEQCS 219
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
V+D L+SL LTKLE + W ++S+ G +L F R+ +LN++ T V++ LP
Sbjct: 220 EVSDSFLQSLNRLTKLEDFNCAWCFRLSDEGLTILSNFHRMRYLNISKTRVSQNFGRFLP 279
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L L + AGT F ++R+A
Sbjct: 280 GMPRLRVLKV-----------------------AGTGF-SDRDAQ--------------- 300
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+L + +L LD+ +GD + + + +R LNL T+ S GV + G
Sbjct: 301 -------YLRGLYSLRELDVEGCSVGDPFLATIYAL-PRIRKLNLGYTKISERGVSLYLG 352
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK-----GFIQQVGAETDLVLS 290
++ L+ L+L I D+A+ ++S + LK +D+++T + G ET L+L+
Sbjct: 353 NMLKLQYLNLDSCLIGDFAVEHLSRLEQLKCLDLTDTTVSSSGLSGLANLTSLET-LILA 411
Query: 291 LTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
T+ L+NL LE L+L+ +SD L L K L HL L A +TD L +
Sbjct: 412 YTSVSNSGLEHLKNLTKLESLSLDTRGISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHI 471
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF-CKMH 395
S +S L +L + +T++GL S R+L+ L+L +T+ ++ C H
Sbjct: 472 SEISTLESLEVCAGGVTDAGLESIGKLRALRTLNLSQNHRITDAGLIHLSCLSH 525
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V+++G++HL +++ LE L L G++ DG+A L L++L LDL G VTD LR + +
Sbjct: 415 VSNSGLEHLKNLTKLESLSLDTRGISDDGLAYLKKLKHLKHLDLFGAKVTDNGLRHISEI 474
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 126
+ LE L++ V++ G + L LNL+ G+ L +S L LNLS
Sbjct: 475 STLESLEVCAGGVTDAGLESIGKLRALRTLNLSQNHRITDAGLIHLSCLSHLTSLNLS 532
>gi|149176715|ref|ZP_01855326.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844356|gb|EDL58708.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 1266
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 75/397 (18%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ DA +KHL + L+ + T +T D LS L L L L G +TD L +L
Sbjct: 440 QIVDAQVKHLKHVPRLKSVSFISTSITDDCTRHLSGLSELETLQLPGTAITDKGLATLND 499
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
L LE LDL S +++ G LK FP+L LNL T G+T L + LE L L N
Sbjct: 500 LKSLENLDLSRSGITDAGLVSLKKFPQLKTLNLGSTRVTDAGLTHLKALPKLESLKLYNT 559
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ V+ + LS L ++K
Sbjct: 560 S-------------------------------------------VTGTGLSELVTLPKLK 576
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
LDLS + + + ++ V+ + +L++L+L+ T+ +SAGV L L L L L T
Sbjct: 577 T---LDLSLTPLTETGLQTVSKL-IHLQSLSLTKTKINSAGVKHLVP-LTELTTLKLDYT 631
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
QIDD A++ ++ + L+ +++ T+I +T +V L+NL L+ L+L++T
Sbjct: 632 QIDDTALASIAKLTKLRSLNLRKTEI--------TDTGMV----HLENLKPLKVLSLDET 679
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF-- 366
+VS+A L L + ++L L LR + D L LSS+ L +L + +T++G+ F
Sbjct: 680 RVSNAGLKSLQSLQQLYRLGLRETDIDDAGLKTLSSIFNLKSLDLYGTKVTDTGMAYFHD 739
Query: 367 ---KPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
KP L+LHG +TE + + P +
Sbjct: 740 KLIKPTD----LNLHGTG-VTEAGVAMLKQQCPNCRI 771
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 199/424 (46%), Gaps = 31/424 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L+L R ++TD GM HL ++ L+ L L ET ++ G+ L SLQ L L L
Sbjct: 644 LTKLRSLNL-RKTEITDTGMVHLENLKPLKVLSLDETRVSNAGLKSLQSLQQLYRLGLRE 702
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK-MFPRLSFLNLAWTGVTKLPNISS 119
+ D L++L + L+ LDL+G++V++ G A + + LNL TGVT+ ++
Sbjct: 703 TDIDDAGLKTLSSIFNLKSLDLYGTKVTDTGMAYFHDKLIKPTDLNLHGTGVTE-AGVAM 761
Query: 120 L--ECLNLSNCTIDSILEGNEN-KAPLAKISLAGTTFINEREAFLYIETSLLSF--LDVS 174
L +C NC I + + ++ LAK+ +G F R E ++ F L
Sbjct: 762 LKQQC---PNCRIQASPPLDSGIQSILAKLKKSG-GFYTRRRLPENAEQLVVRFYPLPGR 817
Query: 175 NSSLS----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
LS R L +K L LD++ + + D ++ + V LR L L+ F+ G+
Sbjct: 818 EKKLSPLDERLSLLNGLKTLYELDVAGADLTDAGLKHLKHV-PELRVLKLNGGNFTEEGL 876
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK-FIDISNTDIKGFIQQVGAETDL-V 288
L L LE+L + I + + + M LK FI N + ++ + T+L V
Sbjct: 877 KQLT-QLKKLEVLQIENAGITNDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKV 935
Query: 289 LSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+L+ L +L +L L LE T+V+D L L L L L ++TD
Sbjct: 936 LNLSQNRIYSDGMVHLASLENLRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGG 995
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 398
L ++ L LS+ +T+ GL + R L LDL+ ++ED + F + P+
Sbjct: 996 TPLLRKMTSLGMLSLNSTYITDRGLKDLETLRGLYRLDLNDTK-VSEDGVKNFQRSQPKC 1054
Query: 399 EVWH 402
+ +
Sbjct: 1055 NIEY 1058
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 180/427 (42%), Gaps = 74/427 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L ELD++ +TDAG+KHL + L L L+ T +G+ L+ L+ L VL +
Sbjct: 834 LKTLYELDVA-GADLTDAGLKHLKHVPELRVLKLNGGNFTEEGLKQLTQLKKLEVLQIEN 892
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+T+ L L+ +T+L+ L +Q++ G L L LNL+ G+ L
Sbjct: 893 AGITNDQLIQLKEMTQLKIFILPQNQITEHGLKHLSGLTNLKVLNLSQNRIYSDGMVHLA 952
Query: 116 NISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++ +L L L + + D LE L + L GTT + L TSL L ++
Sbjct: 953 SLENLRSLALEHTRVADQGLEDLLRLPRLNTLILDGTTITDGGTPLLRKMTSL-GMLSLN 1011
Query: 175 NSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVE-----MVAC----------------- 210
++ ++ L ++ L LDL+ + + +D V+ C
Sbjct: 1012 STYITDRGLKDLETLRGLYRLDLNDTKVSEDGVKNFQRSQPKCNIEYAAPLASSLQYVIQ 1071
Query: 211 ----VGANLRNLN------LSNTRFSSAGVGILAGH------------------LPNLEI 242
GAN+ +N + + F + GI A H + +L+
Sbjct: 1072 ELKEAGANVNVINQGHHYVIESVEFPNHLQGIFAIHNRAEKAKVFDSCLKRISEMKDLKR 1131
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
LS+ + D+ + Y+ + L +D+S + I + L+ L +L++
Sbjct: 1132 LSMHWAEFDNTKLEYIKNLTYLSELDLSGSRIPD------------QGIKDLKGLVNLQK 1179
Query: 303 LNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
L LE TQ++DA + L+ + L L L ++ T L L + +L LS++ L+
Sbjct: 1180 LKLEHTQITDAGVAQLAQLQLNRLYSLDLDHSKTTAACLESLKDMQRLRFLSLQHLELSA 1239
Query: 361 SGLGSFK 367
+ L FK
Sbjct: 1240 ADLEKFK 1246
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 25/272 (9%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
VK++ +G++ L ++ L+ L L D L L+ L + +P+TD L L+
Sbjct: 90 VKISGSGLQSLTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLK 149
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
LT+LE L L+ +Q+S+ G L L+ LNL T IS+ +LS
Sbjct: 150 DLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLYQT------KISNAGLTHLSELKKLK 203
Query: 133 ILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLS-----RFCFL 184
LE NE K++ AG + E L+ L + L V+ S R+ L
Sbjct: 204 QLEVNE-----TKVTSAGVAELQEAIPECKILFDRPVLPAHLKVARQVKSLGGFVRYQDL 258
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
Q + L + LS I D S +AC+ + L++L L+ T S G+ IL L L
Sbjct: 259 DQHRLLSSISLSRPHIDDKS---LACLKGLSGLKSLTLNQTSVSDQGLQIL-NELKGLTS 314
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L++ + I D A+ +++ + L ++++ T +
Sbjct: 315 LTIMQSPITDAALPHLTGLSRLTSLNLARTAV 346
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 58/300 (19%)
Query: 95 LKMFPRLSFLN--LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
LK +L F N ++ +G+ L N+ L+ L NC PL
Sbjct: 79 LKDIRKLGFYNVKISGSGLQSLTNLKHLQNLEFQNC-------------PL--------- 116
Query: 153 FINEREAFLYIET-SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 209
E +AF +++ L+ L V + L+ C L + LE L L ++ I D +E +
Sbjct: 117 ---EDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLN 173
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS---------- 259
+ L +LNL T+ S+AG+ L+ L L+ L ++ T++ ++ +
Sbjct: 174 NL-KELNSLNLYQTKISNAGLTHLS-ELKKLKQLEVNETKVTSAGVAELQEAIPECKILF 231
Query: 260 ---MMPSLKFIDISNTDIKGFIQQVGAETDLVLS-------------LTALQNLNHLERL 303
++P+ + + GF++ + +LS L L+ L+ L+ L
Sbjct: 232 DRPVLPAHLKVARQVKSLGGFVRYQDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSL 291
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L QT VSD L L+ K L L++ + +TD +L L+ LS+LT+L++ +T++G+
Sbjct: 292 TLNQTSVSDQGLQILNELKGLTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGM 351
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 185/433 (42%), Gaps = 60/433 (13%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R V +TD + HL ++ LE LWL T ++ G+ L++L+ L+ L+L +++ L
Sbjct: 136 RHVPLTDQCLVHLKDLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLYQTKISNAGLTH 195
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLK--------MFPR---LSFLNLAWT-----GVTKL 114
L L KL+ L++ ++V++ G A L+ +F R + L +A G +
Sbjct: 196 LSELKKLKQLEVNETKVTSAGVAELQEAIPECKILFDRPVLPAHLKVARQVKSLGGFVRY 255
Query: 115 PNISS---LECLNLSNCTID----SILEGNENKAPL----AKISLAGTTFINEREAFLYI 163
++ L ++LS ID + L+G L +S G +NE +
Sbjct: 256 QDLDQHRLLSSISLSRPHIDDKSLACLKGLSGLKSLTLNQTSVSDQGLQILNELKG---- 311
Query: 164 ETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 221
L+ L + S ++ LT + L L+L+ + + D +E + + + +S
Sbjct: 312 ----LTSLTIMQSPITDAALPHLTGLSRLTSLNLARTAVTDAGMEHIIKLKQLKKLNLIS 367
Query: 222 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA---------------ISYMSMMPSLKF 266
T +SAG+ + LP +I + T D I + + K
Sbjct: 368 -TGVTSAGMARVHAALPKCKIETGKATAPGDSTQAQAAIAALKAQGAHIQNQRVFKNGKL 426
Query: 267 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 326
T I+ F Q+ + + L+++ L+ ++ T ++D LS EL
Sbjct: 427 TSEYFTSIRFFGNQI-----VDAQVKHLKHVPRLKSVSFISTSITDDCTRHLSGLSELET 481
Query: 327 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
L L ++TD L L+ L L NL + + +T++GL S K LK L+L G D
Sbjct: 482 LQLPGTAITDKGLATLNDLKSLENLDLSRSGITDAGLVSLKKFPQLKTLNL--GSTRVTD 539
Query: 387 AILQFCKMHPRIE 399
A L K P++E
Sbjct: 540 AGLTHLKALPKLE 552
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
RF A +G ++ +S + +I D I +++ + ++ + N I G
Sbjct: 46 RFGYAK----SGSKKKIDSVSFTNNKITDTQIKFINHLKDIRKLGFYNVKISGS------ 95
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
L +L NL HL+ L + + D L F L HL +R+ LTD L L
Sbjct: 96 ------GLQSLTNLKHLQNLEFQNCPLEDDAFQHLKQFPALTHLFVRHVPLTDQCLVHLK 149
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
L++L L + +++SGL + L L+L+
Sbjct: 150 DLTQLEVLWLFATQISDSGLEHLNNLKELNSLNLY 184
>gi|59802533|gb|AAX07510.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 550
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 39/356 (10%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
+VTDAG++ L ++ L L LS T +T +G+ L L NL+ LDL VTD L+ L
Sbjct: 3 STQVTDAGLQELKGLANLTSLGLSATKVTNEGLKELKELTNLTALDLFSTGVTDTGLQEL 62
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 131
+ LT L L+L +QV+ G LK L+ LNL TGVT + L+ LN
Sbjct: 63 KGLTNLTSLNLGVTQVTGAGLQELKGLTNLTSLNLGSTGVTD-AGLQDLKGLN------- 114
Query: 132 SILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
LA + L GT + E + + L +V+N L L +
Sbjct: 115 ----------KLASLDLRGTEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNL 164
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+ LDL + + D ++ + + NL +L+L +T+ + G+ L G L NL L L
Sbjct: 165 AS---LDLRDTRVTDVGLQELKGL-NNLASLDLRDTKVTDTGLKELKG-LTNLTALDLFS 219
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
TQ+ D + ++ + L +D+S T + G L L++ L L+L
Sbjct: 220 TQVTDVGLKELNGLTKLASLDLSRTGVTGT------------GLIELKSFTKLALLDLSG 267
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
T+V+DA L L L L L +TDV L +L L+ LT+L + T++GL
Sbjct: 268 TRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSGTRTTDAGL 323
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 181/381 (47%), Gaps = 66/381 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL R +VTD G++ L +++L +L L T +T G+ L L NL+ LDL V
Sbjct: 116 LASLDL-RGTEVTDVGLQELKGLNSLTELRLRATEVTNVGLQELKGLNNLASLDLRDTRV 174
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
TD+ L+ L+ L L LDL ++V++ G LK L+ L+L T VT +L ++
Sbjct: 175 TDVGLQELKGLNNLASLDLRDTKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLT 234
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L L+LS + + GT I E ++F + L+ LD+S + +
Sbjct: 235 KLASLDLS------------------RTGVTGTGLI-ELKSF-----TKLALLDLSGTRV 270
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L Q+K L +L +L+L TR + G+ L G L
Sbjct: 271 TD-AGLHQLKGL----------------------TSLTSLHLGGTRVTDVGLKELKG-LT 306
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+L L LSGT+ D + ++ + +L + +S+T + TD + L L++
Sbjct: 307 SLTSLHLSGTRTTDAGLQELNGLTNLTSLHLSDTRV----------TD--VGLKELKSFT 354
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L L+L T V+D L L L L L + +TDV L +L+ L+KLT+L + A +
Sbjct: 355 KLTSLHLGGTGVTDTGLKELKGLTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLSAAAI 414
Query: 359 TNSGLGSFKPPRSLKLLDLHG 379
T++GL K L LLDL G
Sbjct: 415 TDTGLKELKELTQLALLDLSG 435
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 182/389 (46%), Gaps = 37/389 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L EL L R +VT+ G++ L ++ L L L +T +T G+ L L NL+ LDL
Sbjct: 137 LNSLTELRL-RATEVTNVGLQELKGLNNLASLDLRDTRVTDVGLQELKGLNNLASLDLRD 195
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VTD L+ L+ LT L LDL+ +QV++ G L +L+ L+L+ TGVT +L
Sbjct: 196 TKVTDTGLKELKGLTNLTALDLFSTQVTDVGLKELNGLTKLASLDLSRTGVTGTGLIELK 255
Query: 116 NISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSF 170
+ + L L+LS + D+ L + L + L GT + E + + + LS
Sbjct: 256 SFTKLALLDLSGTRVTDAGLHQLKGLTSLTSLHLGGTRVTDVGLKELKGLTSLTSLHLSG 315
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
+++ L LT + +L LS + + D ++ + L +L+L T + G+
Sbjct: 316 TRTTDAGLQELNGLTNLTSLH---LSDTRVTDVGLKELKSF-TKLTSLHLGGTGVTDTGL 371
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
L G L NL L L TQ+ D + ++ + L + +S I TD
Sbjct: 372 KELKG-LTNLTALDLFSTQVTDVGLQELNGLTKLTSLYLSAAAI----------TD--TG 418
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L+ L L L+L T+V+DA L LS +L L L +TD L +L L+ LT+
Sbjct: 419 LKELKELTQLALLDLSGTRVTDAGLQELSGLTKLAFLRLGGTRVTDAGLKELKGLTSLTS 478
Query: 351 LSIRDAVLTNSGLGSFK---------PPR 370
L + +T++GL PPR
Sbjct: 479 LHLSGTRVTDAGLQELSGLTNLTTTGPPR 507
>gi|302796665|ref|XP_002980094.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
gi|302822036|ref|XP_002992678.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300139524|gb|EFJ06263.1| hypothetical protein SELMODRAFT_162512 [Selaginella moellendorffii]
gi|300152321|gb|EFJ18964.1| hypothetical protein SELMODRAFT_419616 [Selaginella moellendorffii]
Length = 578
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 180/367 (49%), Gaps = 46/367 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L++L+L C + + MK L ++ L +L +S + + GI L L+ L VL++ G
Sbjct: 229 LTKLEKLNLGWCNCIRSSDMKQLSGLTNLLELQISRSKVKDFGITFLKDLKKLEVLNMEG 288
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
PVT + ++ LT L L+L +S+ G L+ L LNL++T G+ L
Sbjct: 289 CPVTFACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLGNLKNLNLSYTNVSDAGMVYLK 348
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
N+ SL+ LNL +C I +G +N L L LD+S+
Sbjct: 349 NLKSLQFLNLDSCKIGD--QGVQNFKNLVN----------------------LKSLDLSD 384
Query: 176 SSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
S + FLT + LE L++SS+M+ D + ++ + +L++LN+ + + + G+ L
Sbjct: 385 SLIGNHALNFLTGLSKLESLNISSTMVTDMGLHKISGL-TSLKSLNIDSRQITDTGLMAL 443
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
L NL L L +I DY I + L+ +++ G I VG + +
Sbjct: 444 T-SLTNLTHLDLFSARITDYGIGSLRHFKKLQSLEVCG----GGITDVGVK--------S 490
Query: 294 LQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
L++L L LNL Q Q++D L LS +L+ L++ N+S+T+ L L L LT+L+
Sbjct: 491 LKDLTDLTYLNLSQNGQLTDQALEALSGLTKLVSLNVGNSSVTNAGLQHLLPLKNLTSLA 550
Query: 353 IRDAVLT 359
++ +T
Sbjct: 551 LQSCKVT 557
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 182/396 (45%), Gaps = 69/396 (17%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQV 73
+T AGM+HL + L+ L L DG+ + L L L+LG + ++ L
Sbjct: 194 ITPAGMRHLAGLPNLKHLDLERCPKIHDGLVYIKGLTKLEKLNLGWCNCIRSSDMKQLSG 253
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
LT L L + S+V + G LK +L LN+ VT + ++SL LNL +C
Sbjct: 254 LTNLLELQISRSKVKDFGITFLKDLKKLEVLNMEGCPVTFACMDTIAGLTSLTTLNLKSC 313
Query: 129 TIDSI----LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
I LEG N L LS+ +VS++ + +L
Sbjct: 314 YISDFGCRKLEGLGNLKNLN-----------------------LSYTNVSDAGM---VYL 347
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+K+L+ L+L S IGD V+ + NL++L+LS++ + + L G L LE L+
Sbjct: 348 KNLKSLQFLNLDSCKIGDQGVQNFKNL-VNLKSLDLSDSLIGNHALNFLTG-LSKLESLN 405
Query: 245 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
+S T + D + +S + SLK ++I + I +T L ++LT+L NL HL+ +
Sbjct: 406 ISSTMVTDMGLHKISGLTSLKSLNIDSRQI--------TDTGL-MALTSLTNLTHLDLFS 456
Query: 305 LEQTQ---------------------VSDATLFPLSTFKELIHLSL-RNASLTDVSLHQL 342
T ++D + L +L +L+L +N LTD +L L
Sbjct: 457 ARITDYGIGSLRHFKKLQSLEVCGGGITDVGVKSLKDLTDLTYLNLSQNGQLTDQALEAL 516
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
S L+KL +L++ ++ +TN+GL P ++L L L
Sbjct: 517 SGLTKLVSLNVGNSSVTNAGLQHLLPLKNLTSLALQ 552
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 37/384 (9%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGL 61
CL +D S + VTD G++ L +E + ++E +D ++ + NL+ L
Sbjct: 133 CLLAVDFSGSM-VTDEGVQCLQICENVEIICMNECKYISDISLSYFTGFTNLTSLSFQKN 191
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+T +R L L L++LDL + G +K +L LNL W + ++ L
Sbjct: 192 KLITPAGMRHLAGLPNLKHLDLERCPKIHDGLVYIKGLTKLEKLNLGWCNCIRSSDMKQL 251
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L ++LE +++ K+ G TF+ + + L L++ ++
Sbjct: 252 SGLT-------NLLELQISRS---KVKDFGITFLKDLKK--------LEVLNMEGCPVTF 293
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
C + + +L L+L S I D + +G NL+NLNLS T S AG+ L +L
Sbjct: 294 ACMDTIAGLTSLTTLNLKSCYISDFGCRKLEGLG-NLKNLNLSYTNVSDAGMVYLK-NLK 351
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+L+ L+L +I D + + +LK +D+S++ I +L L L+
Sbjct: 352 SLQFLNLDSCKIGDQGVQNFKNLVNLKSLDLSDSLIGNH------------ALNFLTGLS 399
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
LE LN+ T V+D L +S L L++ + +TD L L+SL+ LT+L + A +
Sbjct: 400 KLESLNISSTMVTDMGLHKISGLTSLKSLNIDSRQITDTGLMALTSLTNLTHLDLFSARI 459
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWL 382
T+ G+GS + + L+ L++ GG +
Sbjct: 460 TDYGIGSLRHFKKLQSLEVCGGGI 483
>gi|224120462|ref|XP_002331054.1| predicted protein [Populus trichocarpa]
gi|222872984|gb|EEF10115.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 211/431 (48%), Gaps = 93/431 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL---- 58
L+ + L+ C ++D G+KHL ++ + L L ++ +TA+G+ S+L NL LD+
Sbjct: 157 LQAIALNYCNNISDNGLKHLSGLTNITSLSLKKSCSVTAEGMRAFSTLLNLENLDMERCS 216
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD+ ++++ LT L+ L + + V++ G + L+
Sbjct: 217 GIHGGLVHLKGLKKLESLNIRCCKCITDMDMKAISGLTNLKELQISNTNVTDVGVSYLRG 276
Query: 98 FPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL +T + +++L LNL+ C + +G + + L + +
Sbjct: 277 LQKLIMLNLEGCNITTACLDSISALATLAYLNLNRCHLPD--DGCDKFSGLKNLKVLS-- 332
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
L+F DV+++ L L +K LE L+L S IGD+ + +A G
Sbjct: 333 ---------------LAFNDVTDACLVH---LKGLKNLESLNLDSCRIGDEGIANLA--G 372
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L++L LS+T S+G+ L+G +P+LE L+LS T + D + +S + SL+ +++
Sbjct: 373 LPLKSLELSDTIVGSSGLRHLSG-IPHLENLNLSFTLVTDGGLRKLSGLTSLRSLNLDAR 431
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK---------- 322
I TD LTAL +L L RL+L +++D+ L FK
Sbjct: 432 QI----------TDA--GLTALTSLTGLTRLDLFGARITDSGTNCLKYFKNLKSLEICGG 479
Query: 323 -----------ELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
+L+HL++ +N +LTD +L +S L++L +L++ ++++TN GL K
Sbjct: 480 GLTDAGVKNIKDLVHLTVLNLSQNTNLTDKTLELISGLTELVSLNVSNSLITNEGLRYLK 539
Query: 368 PPRSLKLLDLH 378
P ++L+ L L
Sbjct: 540 PLKNLRALTLE 550
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 172/372 (46%), Gaps = 37/372 (9%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG-GLPVTDLVLRSLQ 72
VTDAG+ L S L+ + L+ +D G+ LS L N++ L L VT +R+
Sbjct: 143 VTDAGLGLLKDCSNLQAIALNYCNNISDNGLKHLSGLTNITSLSLKKSCSVTAEGMRAFS 202
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
L LE LD+ + G LK +L LN+ C D
Sbjct: 203 TLLNLENLDMERCSGIHGGLVHLKGLKKLESLNIRCC-----------------KCITDM 245
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKAL 190
++ L ++ ++ T + ++L L+ L++ +++ C ++ + L
Sbjct: 246 DMKAISGLTNLKELQISNTNVTDVGVSYLRGLQKLI-MLNLEGCNITTACLDSISALATL 304
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
+L+L+ + DD + + + NL+ L+L+ + A + L G L NLE L+L +I
Sbjct: 305 AYLNLNRCHLPDDGCDKFSGL-KNLKVLSLAFNDVTDACLVHLKG-LKNLESLNLDSCRI 362
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D I+ ++ +P LK +++S+T VG+ L L + HLE LNL T V
Sbjct: 363 GDEGIANLAGLP-LKSLELSDT-------IVGSS-----GLRHLSGIPHLENLNLSFTLV 409
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
+D L LS L L+L +TD L L+SL+ LT L + A +T+SG K +
Sbjct: 410 TDGGLRKLSGLTSLRSLNLDARQITDAGLTALTSLTGLTRLDLFGARITDSGTNCLKYFK 469
Query: 371 SLKLLDLHGGWL 382
+LK L++ GG L
Sbjct: 470 NLKSLEICGGGL 481
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 202 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSM 260
D +++++ G++L +++LS++ + AG+G+L NL+ ++L+ I D + ++S
Sbjct: 120 DSWMDVISSQGSSLLSVDLSDSDVTDAGLGLLK-DCSNLQAIALNYCNNISDNGLKHLSG 178
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
+ ++ + + + V AE + A L +LE L++E+ L L
Sbjct: 179 LTNITSLSLKKS------CSVTAE-----GMRAFSTLLNLENLDMERCSGIHGGLVHLKG 227
Query: 321 FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
K+L L++R +TD+ + +S L+ L L I + +T+ G+ + + L +L+L G
Sbjct: 228 LKKLESLNIRCCKCITDMDMKAISGLTNLKELQISNTNVTDVGVSYLRGLQKLIMLNLEG 287
>gi|406836026|ref|ZP_11095620.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 586
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 183/403 (45%), Gaps = 53/403 (13%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
K+ +G+ L + L+ L LS + +T + +A +++L+NL+ L+L P++ L+SL
Sbjct: 180 TTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWNTPISADGLKSL 239
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 126
LT L L+L + + + G A L L LNL TGVT L I +L LNL+
Sbjct: 240 GTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLSQIKNLTNLNLN 299
Query: 127 NCTI-DSILEGNENKAPLAKISLAGTTF----------------------------INER 157
+ I D+ + L ++ L GT + E
Sbjct: 300 DTQITDAGMVAIARHKDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKTAVTDAGVEEL 359
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
F +++ L VS+ L L L+ L L + I D + +A + L
Sbjct: 360 AGFKHLKILRLGSTKVSDEGLKSLLGLEH---LQSLGLGGTGITDVGAKQLASL-TTLTG 415
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI-----DISNT 272
L+L T + GV L G L NLE LSL T+I D +S + LK + IS+
Sbjct: 416 LDLDATAVTDEGVRELGG-LSNLEYLSLISTKISDDGVSGLGAFKKLKMLFLHNNQISDE 474
Query: 273 DIKGFIQQVGAETDLVLSLT--------ALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
+KG + + T L LS+T L+NL HL+ L L TQ++DA L L+ EL
Sbjct: 475 GLKG-LNDLSQLTTLYLSMTQVTDVGMKELKNLKHLKDLVLCDTQITDAGLKELTGLSEL 533
Query: 325 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
L +RN ++TD L L+S LT+L I + +GL +FK
Sbjct: 534 NVLVIRNVAVTDACLEHLTSFKNLTHLCIDVHRFSEAGLNAFK 576
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 174/384 (45%), Gaps = 28/384 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDLS ++TD G+K L ++ L L L T ++ G++ LS + L L+L +
Sbjct: 77 LESLDLSNT-QITDLGLKELRKLNALTSLNLRYTAISDVGLSELSEMSKLDTLNLSATQI 135
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
+D L L L L +DL + +++ L + LS +NL+ T G+ L +
Sbjct: 136 SDAGLDKLLALRNLTAIDLSETAITDSALKPLSVLENLSTINLSTTKIDGSGLADLSGLK 195
Query: 119 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL----LSFLDV 173
+L+ L LS+ I + L G L + L T + L T L L F +
Sbjct: 196 NLKTLVLSHSPITNEALAGVAALRNLTTLELWNTPISADGLKSLGTLTDLTKLNLGFTSL 255
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
++ L+ LT +KAL + + G S+ + NL NLNL++T+ + AG+ +
Sbjct: 256 DDTGLAELATLTNLKALNLMQTGVTDTGLSSLSQI----KNLTNLNLNDTQITDAGMVAI 311
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
A H +L L L GT++ D + + + L + I T + G E
Sbjct: 312 ARH-KDLNELHLEGTRLTDVGLRALKTLGELDVLQIGKT----AVTDAGVE--------E 358
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L HL+ L L T+VSD L L + L L L +TDV QL+SL+ LT L +
Sbjct: 359 LAGFKHLKILRLGSTKVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDL 418
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDL 377
+T+ G+ +L+ L L
Sbjct: 419 DATAVTDEGVRELGGLSNLEYLSL 442
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 43/340 (12%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+ L+S L L LDL +TDL L+ L+ L L L+L + +S+ G + L +L
Sbjct: 68 VHLISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTAISDVGLSELSEMSKLDT 127
Query: 104 LNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINER 157
LNL+ T G+ KL + +L ++LS I DS L+ PL+ L + IN
Sbjct: 128 LNLSATQISDAGLDKLLALRNLTAIDLSETAITDSALK------PLS--VLENLSTIN-- 177
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
LS + S L+ L+ +K L+ L LS S I ++++ VA + NL
Sbjct: 178 ----------LSTTKIDGSGLAD---LSGLKNLKTLVLSHSPITNEALAGVAAL-RNLTT 223
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L L NT S+ G+ L G L +L L+L T +DD ++ ++ + +LK +++ T +
Sbjct: 224 LELWNTPISADGLKSL-GTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGV--- 279
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
TD LS +L + +L LNL TQ++DA + ++ K+L L L LTDV
Sbjct: 280 -------TDTGLS--SLSQIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRLTDV 330
Query: 338 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L L +L +L L I +T++G+ + LK+L L
Sbjct: 331 GLRALKTLGELDVLQIGKTAVTDAGVEELAGFKHLKILRL 370
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 142 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSM 199
P+ IS AG N+R L L LD+SN+ ++ L ++ AL L+L +
Sbjct: 51 PIVGISFAGNARFNDRYVHLISPLGRLESLDLSNTQITDLGLKELRKLNALTSLNLRYTA 110
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
I D + ++ + + L LNLS T+ S AG+ L L NL + LS T I D A+ +S
Sbjct: 111 ISDVGLSELSEM-SKLDTLNLSATQISDAGLDKLLA-LRNLTAIDLSETAITDSALKPLS 168
Query: 260 MMPSLKFIDISNTDIKGF----IQQVGAETDLVLS-----------LTALQNLNHLE--- 301
++ +L I++S T I G + + LVLS + AL+NL LE
Sbjct: 169 VLENLSTINLSTTKIDGSGLADLSGLKNLKTLVLSHSPITNEALAGVAALRNLTTLELWN 228
Query: 302 ------------------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
+LNL T + D L L+T L L+L +TD L LS
Sbjct: 229 TPISADGLKSLGTLTDLTKLNLGFTSLDDTGLAELATLTNLKALNLMQTGVTDTGLSSLS 288
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
+ LTNL++ D +T++G+ + + L L L G L D L+ K ++V
Sbjct: 289 QIKNLTNLNLNDTQITDAGMVAIARHKDLNELHLEGTRL--TDVGLRALKTLGELDVLQ 345
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KV+D G+K LL + L+ L L TG+T G L+SL L+ LDL VTD +R L
Sbjct: 374 KVSDEGLKSLLGLEHLQSLGLGGTGITDVGAKQLASLTTLTGLDLDATAVTDEGVRELGG 433
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 128
L+ LEYL L +++S+ G + L F +L L ++ G+ L ++S L L LS
Sbjct: 434 LSNLEYLSLISTKISDDGVSGLGAFKKLKMLFLHNNQISDEGLKGLNDLSQLTTLYLSMT 493
Query: 129 TIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSL--LSFLDVSNSSLSRFCF-- 183
+ + ++ +N L + L T +A L T L L+ L + N +++ C
Sbjct: 494 QVTDVGMKELKNLKHLKDLVLCDTQIT---DAGLKELTGLSELNVLVIRNVAVTDACLEH 550
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
LT K L HL C+ + RFS AG+ +PN+ +L
Sbjct: 551 LTSFKNLTHL----------------CIDVH---------RFSEAGLNAFKTSMPNVRVL 585
>gi|118483021|gb|ABK93422.1| unknown [Populus trichocarpa]
Length = 107
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 374 LLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQK 433
+LDL G WLLTEDAIL FCK HP IE+ HE V+ SDQ + +P RT LR V QK
Sbjct: 1 MLDLRGCWLLTEDAILSFCKRHPLIELRHE-HVVSTSDQTARHRLTPPRTFLRPPQVNQK 59
Query: 434 QDPMPMSHSFLDQRLKYSREELLELQYSSLSLARPDDSS 472
Q+ + +S F+DQRLKY+REELL LQ+ S SL P D S
Sbjct: 60 QEKLIVSQYFIDQRLKYTREELLALQFQSSSLGSPFDKS 98
>gi|108763744|ref|YP_632240.1| leucine-rich repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108467624|gb|ABF92809.1| leucine-rich repeat domain protein [Myxococcus xanthus DK 1622]
Length = 624
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 170/373 (45%), Gaps = 42/373 (11%)
Query: 13 VKVTDAGMKHLLSI---STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 69
V TD G HL S+ + LE L L+ T +T G+A L ++ L+VL L PV+D L
Sbjct: 145 VSGTDFGNAHLASLENATQLEALHLNATRVTNVGLAPLKRMRRLAVLRLDETPVSDAGLA 204
Query: 70 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 129
SL T L + L G+ VS +G L P LE L+LS+
Sbjct: 205 SLSEHTTLRRVTLAGTAVSPQGLGFLARQP-------------------GLEELDLSDTA 245
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMK 188
+D + APL ++L+GT N L SL L + +S + +T ++
Sbjct: 246 VDDTVLAVLPGAPLHTLNLSGTKVTNAGLRGLSAMPSLRRLGLARTAASDASLLHITGLR 305
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
LE L L S+ + D + +A + A LR L LS R AG+ LAG L LE L L T
Sbjct: 306 ELEALHLGSTQVTDAGLLHLAKLPA-LRALVLSKARIRGAGLRHLAG-LSRLEALHLDDT 363
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ-----VGAE----TDLVL---SLTALQN 296
+ D A+ ++ + L+ +D+S T I G Q V E + L L SLTAL
Sbjct: 364 LVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTALAP 423
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD---VSLHQLSSLSKLTNLSI 353
L+ L RL L T + L L + L HL L TD S+ Q + L +L
Sbjct: 424 LSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQ--AFPGLHSLKA 481
Query: 354 RDAVLTNSGLGSF 366
+LT++GLG F
Sbjct: 482 ERTLLTDAGLGQF 494
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 148/329 (44%), Gaps = 42/329 (12%)
Query: 1 MTCLKELDLSR--CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
+T L+EL+ +VTDAG+ HL + L L LS+ + G+ L+ L L L L
Sbjct: 301 ITGLRELEALHLGSTQVTDAGLLHLAKLPALRALVLSKARIRGAGLRHLAGLSRLEALHL 360
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWT--GVTK 113
V D LR L+ L +L LDL + ++ G L L L LA T +T
Sbjct: 361 DDTLVGDSALRHLRGLNELRELDLSRTAITGTGLQELSTLVALESLWLSGLALTDDSLTA 420
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAK-ISLAGTTFINE-----REAF-----LY 162
L +S L L LS+ I + PL + + L+ T F +E R+AF L
Sbjct: 421 LAPLSQLTRLALSHTPIGPEALNHLGSRPLLRHLDLSKTGFTDEWVPSIRQAFPGLHSLK 480
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
E +LL +++ L +F T+++A+ ++ ++I + + + A L L+L
Sbjct: 481 AERTLL-----TDAGLGQFAEWTELEAIH---VAGTLINGSGLTRLHTL-ARLTTLDLGA 531
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
TR S G L G L LS++G + D + ++ SL+ + ++ T +
Sbjct: 532 TRLDSEGQKALQG-FTKLVWLSVAGVRTGDEMLGHLPR--SLRTLYLTRTKV-------- 580
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVS 311
TD L AL L HL L+L T VS
Sbjct: 581 --TD--AGLPALHKLPHLRELDLRGTAVS 605
>gi|224058291|ref|XP_002299477.1| predicted protein [Populus trichocarpa]
gi|222846735|gb|EEE84282.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT LKE+D+SRC KVTDAG++HL+SISTL+ L +SETG+TADGI LLSSL L VLDLG
Sbjct: 109 MTSLKEVDISRCAKVTDAGIRHLVSISTLQILRISETGVTADGIKLLSSLTTLFVLDLGD 168
Query: 61 LPVTDLVLRSLQVL 74
LPVTD L SLQVL
Sbjct: 169 LPVTDTALSSLQVL 182
>gi|359484681|ref|XP_002262830.2| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Vitis vinifera]
gi|296084545|emb|CBI25566.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 36/359 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C +TD+ +K L +++L++L +S + +T GI+ L L L +LD+ G
Sbjct: 229 LTKLESLNIRYCKCITDSDLKALSGLTSLKELQMSCSNITDIGISYLKGLCKLMLLDVEG 288
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VT L SL L L YL+L +S+ G L LN+ + +T L
Sbjct: 289 CHVTTSCLDSLSALVALSYLNLNRCGLSDVGCEKFSGLKNLKVLNMGFNNITDACLVHLK 348
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISL----------AGTTFINEREAFLYIET 165
+++LE LNL +C+I+ +E A L +SL G+ + +E+
Sbjct: 349 GLTNLESLNLDSCSIE-----DEGLANLTGLSLLKCLELSDTKVGSNGLCHLSGLTKLES 403
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF V++S L + C LT +K+ L+L + I D + + + L +L+L R
Sbjct: 404 LNLSFTLVTDSGLKKLCGLTSLKS---LNLDARQITDAGLAAITSL-TGLTHLDLFGARI 459
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
S AG L H NL+ L + G + D + + + SL +++S Q T
Sbjct: 460 SDAGTNCLR-HFKNLQTLEICGGGLTDAGVKNIKGLASLTLLNLS---------QNCNLT 509
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
D L + + L L LN+ +++++ L L K L+ LSL + +T + +L S
Sbjct: 510 DKTLEM--ISGLTALVSLNVSNSRITNNGLQHLKPLKNLLSLSLESCKVTASEIRKLQS 566
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 26/378 (6%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRG 91
LS + +T DG++LL N+ VL +++ L+++ L+ L L S V+ G
Sbjct: 139 LSGSSVTDDGLSLLKDCSNIQVLSFNYCDQISEPGLKNISGLSNLTSLSFKKSNTVTAEG 198
Query: 92 AAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL--SNCTIDSILEGNENKAPLA 144
L+ L+L G+ L ++ LE LN+ C DS L+ L
Sbjct: 199 MRAFSSLVNLAKLDLERCSRIHGGLIHLKGLTKLESLNIRYCKCITDSDLKALSGLTSLK 258
Query: 145 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 202
++ ++ + + ++L L+ LDV ++ C L+ + AL +L+L+ + D
Sbjct: 259 ELQMSCSNITDIGISYLKGLCKLM-LLDVEGCHVTTSCLDSLSALVALSYLNLNRCGLSD 317
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
E + + NL+ LN+ + A + L G L NLE L+L I+D ++ ++ +
Sbjct: 318 VGCEKFSGL-KNLKVLNMGFNNITDACLVHLKG-LTNLESLNLDSCSIEDEGLANLTGLS 375
Query: 263 SLKFIDISNTDI--KGFIQQVGAET--DLVLSLT--------ALQNLNHLERLNLEQTQV 310
LK +++S+T + G G L LS T L L L+ LNL+ Q+
Sbjct: 376 LLKCLELSDTKVGSNGLCHLSGLTKLESLNLSFTLVTDSGLKKLCGLTSLKSLNLDARQI 435
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
+DA L +++ L HL L A ++D + L L L I LT++G+ + K
Sbjct: 436 TDAGLAAITSLTGLTHLDLFGARISDAGTNCLRHFKNLQTLEICGGGLTDAGVKNIKGLA 495
Query: 371 SLKLLDLHGGWLLTEDAI 388
SL LL+L LT+ +
Sbjct: 496 SLTLLNLSQNCNLTDKTL 513
>gi|357468127|ref|XP_003604348.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355505403|gb|AES86545.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 573
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 181/373 (48%), Gaps = 42/373 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C +TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G
Sbjct: 224 LTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEG 283
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLP 115
VT L SL L L L+L +S+RG +L LNL + + +
Sbjct: 284 CLVTSACLDSLSELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMK 343
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ LE LNL +C I EG EN LAG + + +E LS +V N
Sbjct: 344 GLTKLESLNLDSCKIGD--EGLEN--------LAG------HKQLICLE---LSDTEVGN 384
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L L+ + +LE ++LS +++ D + + C ++L++LNL + + AG+ L
Sbjct: 385 HGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGLSSLKSLNLDAYQITDAGLATLTS 440
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L L G +I D +Y+ +L+ ++I + G + G + ++
Sbjct: 441 -LTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICS----GGLTDAGVKN--------IK 487
Query: 296 NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ L LNL Q + ++D T+ ++ L+ L+L N +T L L +L L +L++
Sbjct: 488 ELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLE 547
Query: 355 DAVLTNSGLGSFK 367
+T + + FK
Sbjct: 548 SCKVTANDIKKFK 560
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 182/391 (46%), Gaps = 51/391 (13%)
Query: 7 LDLSRCVK--VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT 64
L+L+ C K + D + +L S+S + ++A G++ S L NL LDL P
Sbjct: 160 LNLNYCDKFQIMDWSLSNLTSLS-----FRRNDSISAQGMSAFSRLVNLVKLDLERCPGI 214
Query: 65 DLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
LQ LTKLE L++ W + +++ L L+ L ++ + G++ L +
Sbjct: 215 HGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQ 274
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSS 177
L LNL C + S A L +S L + +N L+ ++S+
Sbjct: 275 KLALLNLEGCLVTS--------ACLDSLSELPALSNLN------------LNRCNISDRG 314
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
RF ++++ L+ L+L + IGD + + + L +LNL + + G+ LAGH
Sbjct: 315 CERF---SRLEKLKVLNLGFNDIGDRCLAHMKGL-TKLESLNLDSCKIGDEGLENLAGH- 369
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L L LS T++ ++ + ++S + SL+ I++S T + G L L L
Sbjct: 370 KQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT----VVSDSG--------LRKLCGL 417
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
+ L+ LNL+ Q++DA L L++ L L L A +TDV + L L +L I
Sbjct: 418 SSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGG 477
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT++G+ + K SL L+L LT+ +
Sbjct: 478 LTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 508
>gi|168012567|ref|XP_001758973.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689672|gb|EDQ76042.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 48/369 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L++L++ C+ V ++ +KHL + L++L +S + ++ G+A L+ L L L + G
Sbjct: 233 LTTLEKLNVGWCIGVRNSDIKHLSGLVNLKELQISRSKVSDSGLASLTGLTKLRSLSMEG 292
Query: 61 L-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----L 114
VT + S+ LT + +L++ + + G L+ L LN+ + V+ L
Sbjct: 293 CQAVTSKGMESIGGLTGVWHLNVNSCFLHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFL 352
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+++LE LNL +C I G EN L L LD+S
Sbjct: 353 KGLTNLERLNLDSCKIGD--HGIENVKGLVN----------------------LKMLDLS 388
Query: 175 NSSL--SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
++ + + FLT +K LE L+LS + I D + +A + +L +LNL + + + G+
Sbjct: 389 DTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTIATI-TSLTSLNLDSKQITDTGLA 447
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
L G L L+ L L G +I DY ++ + L+ +++ G I G
Sbjct: 448 ALTG-LTGLKTLDLFGARITDYGMACLRHFKKLQTLELCG----GGITDAGVR------- 495
Query: 292 TALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
++++L L LNL Q +++D +L LS K L+ L+L N+ +T+ L L L+ LT+
Sbjct: 496 -SIKDLTSLTSLNLSQNMRLTDNSLQYLSGMKNLVSLNLANSRVTNAGLQHLRPLTNLTS 554
Query: 351 LSIRDAVLT 359
L+++D +T
Sbjct: 555 LALQDCKVT 563
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 62/392 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLDLGG 60
LK LDL RC + G +L ++TLEKL W G+ I LS L NL L +
Sbjct: 212 LKNLDLQRCPSI-QGGFVYLKGLTTLEKLNVGWC--IGVRNSDIKHLSGLVNLKELQISR 268
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
V+D L SL LTKL L + G Q A K + L W
Sbjct: 269 SKVSDSGLASLTGLTKLRSLSMEGCQ-----AVTSKGMESIGGLTGVWH----------- 312
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
LN+++C + + + E + + T + + +VSNS +
Sbjct: 313 --LNVNSCFLHD-------------------SGFQKLEGLINLRTLNMGYNNVSNSGMG- 350
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
FL + LE L+L S IGD +E V + NL+ L+LS+T SAG+ L G L NL
Sbjct: 351 --FLKGLTNLERLNLDSCKIGDHGIENVKGL-VNLKMLDLSDTEIESAGLRFLTG-LKNL 406
Query: 241 EILSLSGTQ-IDDYAISYMSMMPSLKFID-----ISNTDIKGFIQQVGAET-DLV----- 288
E L+LS T I D + ++ + SL ++ I++T + G +T DL
Sbjct: 407 ESLNLSFTGGIADSGLRTIATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARIT 466
Query: 289 -LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLS 346
+ L++ L+ L L ++DA + + L L+L +N LTD SL LS +
Sbjct: 467 DYGMACLRHFKKLQTLELCGGGITDAGVRSIKDLTSLTSLNLSQNMRLTDNSLQYLSGMK 526
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
L +L++ ++ +TN+GL +P +L L L
Sbjct: 527 NLVSLNLANSRVTNAGLQHLRPLTNLTSLALQ 558
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 178/393 (45%), Gaps = 35/393 (8%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL-GGLPVTDLVLRSLQ 72
VTD G+ L S + L+ L L+ AD G+ LS L NL+ L L +T +++
Sbjct: 148 VTDEGLSFLESCTNLQSLILNACESIADEGLTSLSGLSNLTTLSLRSNNMITAAGMQNFT 207
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL-NLSNCTID 131
L L+ LDL G LK L LN+ W + +I L L NL I
Sbjct: 208 HLVSLKNLDLQRCPSIQGGFVYLKGLTTLEKLNVGWCIGVRNSDIKHLSGLVNLKELQI- 266
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+++ ++ LA T + + + S+ V++ + LT +
Sbjct: 267 -------SRSKVSDSGLASLTGLTKLRSL-----SMEGCQAVTSKGMESIGGLT---GVW 311
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
HL+++S + D + + + NLR LN+ S++G+G L G L NLE L+L +I
Sbjct: 312 HLNVNSCFLHDSGFQKLEGL-INLRTLNMGYNNVSNSGMGFLKG-LTNLERLNLDSCKIG 369
Query: 252 DYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTA---------LQNLN 298
D+ I + + +LK +D+S+T+I+ F+ + L LS T + +
Sbjct: 370 DHGIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTIATIT 429
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L LNL+ Q++D L L+ L L L A +TD + L KL L + +
Sbjct: 430 SLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLELCGGGI 489
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
T++G+ S K SL L+L LT+++ LQ+
Sbjct: 490 TDAGVRSIKDLTSLTSLNLSQNMRLTDNS-LQY 521
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 50/368 (13%)
Query: 51 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL--- 106
++L LD+ VTD L L+ T L+ L L + +++ G L L+ L+L
Sbjct: 136 ESLLALDISSSTVTDEGLSFLESCTNLQSLILNACESIADEGLTSLSGLSNLTTLSLRSN 195
Query: 107 ---AWTGVTKLPNISSLECLNLSNC-TIDSILEGNENKAPLAKISLAGTTFINERE---- 158
G+ ++ SL+ L+L C +I + L K+++ + +
Sbjct: 196 NMITAAGMQNFTHLVSLKNLDLQRCPSIQGGFVYLKGLTTLEKLNVGWCIGVRNSDIKHL 255
Query: 159 -AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE----------------------HLDL 195
+ ++ +S VS+S L+ LT++++L HL++
Sbjct: 256 SGLVNLKELQISRSKVSDSGLASLTGLTKLRSLSMEGCQAVTSKGMESIGGLTGVWHLNV 315
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
+S + D + + + NLR LN+ S++G+G L G L NLE L+L +I D+ I
Sbjct: 316 NSCFLHDSGFQKLEGL-INLRTLNMGYNNVSNSGMGFLKG-LTNLERLNLDSCKIGDHGI 373
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDAT 314
+ + +LK +D+S+T+I E+ + LT L+N LE LNL T ++D+
Sbjct: 374 ENVKGLVNLKMLDLSDTEI---------ESAGLRFLTGLKN---LESLNLSFTGGIADSG 421
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
L ++T L L+L + +TD L L+ L+ L L + A +T+ G+ + + L+
Sbjct: 422 LRTIATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQT 481
Query: 375 LDLHGGWL 382
L+L GG +
Sbjct: 482 LELCGGGI 489
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T + L+++ C + D+G + L + L L + ++ G+ L L NL L+L
Sbjct: 307 LTGVWHLNVNSCF-LHDSGFQKLEGLINLRTLNMGYNNVSNSGMGFLKGLTNLERLNLDS 365
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKL 114
+ D + +++ L L+ LDL +++ + G L L LNL++T G+ +
Sbjct: 366 CKIGDHGIENVKGLVNLKMLDLSDTEIESAGLRFLTGLKNLESLNLSFTGGIADSGLRTI 425
Query: 115 PNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREA----FLYIETSLLS 169
I+SL LNL + I D+ L L + L G + A F ++T L
Sbjct: 426 ATITSLTSLNLDSKQITDTGLAALTGLTGLKTLDLFGARITDYGMACLRHFKKLQTLELC 485
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSA 228
++++ + LT +L L+LS +M + D+S++ ++ + NL +LNL+N+R ++A
Sbjct: 486 GGGITDAGVRSIKDLT---SLTSLNLSQNMRLTDNSLQYLSGM-KNLVSLNLANSRVTNA 541
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYM--SMMPSLKFI 267
G+ L L NL L+L ++ A+ + + +PSL I
Sbjct: 542 GLQHLR-PLTNLTSLALQDCKVTLPAVERLQATYLPSLTVI 581
>gi|406835528|ref|ZP_11095122.1| hypothetical protein SpalD1_27934 [Schlesneria paludicola DSM
18645]
Length = 590
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 49/391 (12%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
+++TD G++ L + L L+L+ + G+ L L++L+VLDL G +TD L L
Sbjct: 210 TIRITDEGLEQLSDLPELRHLYLANIPIADSGLTSLRRLKHLTVLDLRGTQITDEGLNEL 269
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS 126
+ L +LE L +Q+S+ G LK L+ L + TG+ +L N+ L+ L+LS
Sbjct: 270 RGLHELETFKLTKTQISDAGLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLS 329
Query: 127 NCTIDSILEGNE------------NKAPLAKIS-------------LAGTTFINEREAFL 161
+ + + E N + P+ + G T I +
Sbjct: 330 DTQVTDV-ELNRLSSIRTLTDLRLSDTPITDVGLRSLRELKRLRRLTLGGTQITDISELN 388
Query: 162 YIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
++ L+ LD+ + ++ L +K L L+L ++ + D S+ + C+ +L+ L+
Sbjct: 389 HLRD--LTHLDLRVTPITDTGLHGLGDLKHLTSLNLDATQVTDASLSELKCL-VHLKELS 445
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
LS T S G L L L +L I D + + + SLK + IS T +
Sbjct: 446 LSRTAISGLGFKSLE-RLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTRVTDD-- 502
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
L L L L+ L +E ++DA + L +L L + + +TD SL
Sbjct: 503 ----------GLAELHQLEGLQELRIENNALTDAGMSELMVLGKLRTLGISHNKITDTSL 552
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
+ L LT L IR+ +T+SGL FK R
Sbjct: 553 SDIKRLKNLTMLRIRNTEITDSGLNGFKDAR 583
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 194/431 (45%), Gaps = 55/431 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L L+LS ++TD G+ HL ++ LE +WL T +T GI L+S + L+ L+L
Sbjct: 98 LTSLVNLNLSDT-RITDRGLFHLKRLTNLETVWLQNTSITDAGIKELASFERLAELNLSD 156
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----------T 109
+TD LR L L L L ++++ G LK ++ L+L+
Sbjct: 157 TRITDRGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLKTITTLDLSNLNGLNTIRITDE 216
Query: 110 GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTF----INEREAFLYIE 164
G+ +L ++ L L L+N I DS L L + L GT +NE +E
Sbjct: 217 GLEQLSDLPELRHLYLANIPIADSGLTSLRRLKHLTVLDLRGTQITDEGLNELRGLHELE 276
Query: 165 TSLLSFLDVSNSSLSRFCF---------------------LTQMKALEHLDLSSSMIGDD 203
T L+ +S++ L+ LT + L+ LDLS + + D
Sbjct: 277 TFKLTKTQISDAGLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDV 336
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
+ ++ + L +L LS+T + G+ L L L+L GTQI D IS ++ +
Sbjct: 337 ELNRLSSI-RTLTDLRLSDTPITDVGL-RSLRELKRLRRLTLGGTQITD--ISELNHLRD 392
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
L +D+ T I TD L L +L HL LNL+ TQV+DA+L L
Sbjct: 393 LTHLDLRVTPI----------TD--TGLHGLGDLKHLTSLNLDATQVTDASLSELKCLVH 440
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 383
L LSL +++ + L L +LT L ++ + GL +SLK L + G +
Sbjct: 441 LKELSLSRTAISGLGFKSLERLEQLTVLRCDRCLIADEGLREICTLKSLKTLVISGTR-V 499
Query: 384 TEDAILQFCKM 394
T+D + + ++
Sbjct: 500 TDDGLAELHQL 510
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 46/395 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LDL + + D +K L +++L L LS+T +T G+ L L NL + L +
Sbjct: 77 LSDLDL-HAIPILDRDLKELADLTSLVNLNLSDTRITDRGLFHLKRLTNLETVWLQNTSI 135
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWT--GVTKLPNIS 118
TD ++ L +L L+L +++++RG L F L+ L N+ T G+ L +
Sbjct: 136 TDAGIKELASFERLAELNLSDTRITDRGLRELSDFQNLTTLWLQNVEMTDDGLQALKRLK 195
Query: 119 SLECLNLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++ L+LSN TI EG E + L ++ LY L+ + ++
Sbjct: 196 TITTLDLSNLNGLNTIRITDEGLEQLSDLPELR------------HLY-----LANIPIA 238
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+S L+ L ++K L LDL + I D+ + + + L L+ T+ S AG+ L
Sbjct: 239 DSGLTS---LRRLKHLTVLDLRGTQITDEGLNELRGL-HELETFKLTKTQISDAGLTALK 294
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLS 290
G L NL L + QI + ++ + LK +D+S+T + + + TDL LS
Sbjct: 295 G-LKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSDTQVTDVELNRLSSIRTLTDLRLS 353
Query: 291 LTALQNLNHLERLNLEQ--------TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
T + ++ L++ TQ++D + L+ ++L HL LR +TD LH L
Sbjct: 354 DTPITDVGLRSLRELKRLRRLTLGGTQITDIS--ELNHLRDLTHLDLRVTPITDTGLHGL 411
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L LT+L++ +T++ L K LK L L
Sbjct: 412 GDLKHLTSLNLDATQVTDASLSELKCLVHLKELSL 446
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 53/331 (16%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
LL +LS LDL +P+ D L+ L LT L L+L +++++RG LK RL+ L
Sbjct: 70 LLKPFSDLSDLDLHAIPILDRDLKELADLTSLVNLNLSDTRITDRGLFHLK---RLTNLE 126
Query: 106 LAW--------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
W G+ +L + L LNLS+ +I+ G + E
Sbjct: 127 TVWLQNTSITDAGIKELASFERLAELNLSDT----------------RITDRG---LREL 167
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS------SSMIGDDSVEMVACV 211
F + T L +++++ L L ++K + LDLS + I D+ +E ++ +
Sbjct: 168 SDFQNLTTLWLQNVEMTDDGLQ---ALKRLKTITTLDLSNLNGLNTIRITDEGLEQLSDL 224
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
LR+L L+N + +G+ L L +L +L L GTQI D ++ + + L+ ++
Sbjct: 225 -PELRHLYLANIPIADSGLTSLR-RLKHLTVLDLRGTQITDEGLNELRGLHELETFKLTK 282
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
T I LTAL+ L +L L + Q++ L L+ +L L L +
Sbjct: 283 TQISDA------------GLTALKGLKNLTTLLIGSNQITGTGLQELTNLDQLKTLDLSD 330
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+TDV L++LSS+ LT+L + D +T+ G
Sbjct: 331 TQVTDVELNRLSSIRTLTDLRLSDTPITDVG 361
>gi|168057635|ref|XP_001780819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667754|gb|EDQ54376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 564
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 183/374 (48%), Gaps = 41/374 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L++L++ C+ V +A + HL I L++L +S + + G+A L + NL L + G
Sbjct: 214 LTTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSMEG 273
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLP 115
P+T ++++ LT L +L++ + + G L+ L LNL + +G+ L
Sbjct: 274 CPITAQSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGLINLRTLNLGYNELTDSGMVFLK 333
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+++LE LNL +C + G I + L + LS +V N
Sbjct: 334 GLTNLERLNLDSCKV-------------------GDEGIKHVKGLLNLRMLDLSDSEVGN 374
Query: 176 SSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L FL+ +K LE L+LS + + D + +A + +L +LNL + + + G+ L
Sbjct: 375 VGLR---FLSGLKKLEILNLSFTGGVTDIGLSTIATI-TSLTSLNLDSKQITDTGLAALT 430
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G L L+ L L G +I DY ++ + +L+ +++ G I VG + L+L
Sbjct: 431 G-LTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCG----GGITDVGVSSIKDLTLLTS 485
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
NL+H RL +D +L LS + L+ L++ N+ +T+ L L L+KLT+L+++
Sbjct: 486 LNLSHNLRL-------TDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQ 538
Query: 355 DAVLTNSGLGSFKP 368
+T + + K
Sbjct: 539 GCKVTRTAVDHLKA 552
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 191/421 (45%), Gaps = 65/421 (15%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL-TADGIALLSSLQNLSVLDLGG 60
T L+ L L+ C ++D G+ L +S L L L + L TA G+ ++L +L LDL
Sbjct: 141 TNLQTLSLNSCDHISDEGLSVLSGLSNLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLER 200
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKL 114
P+ L+ LT LE L++ W V N L L L ++ + GV L
Sbjct: 201 CPLIHGGFVYLRGLTTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRSKVNDSGVASL 260
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN----------EREAFLYIE 164
+++L L++ C I + ++ +A ++ IN + E + +
Sbjct: 261 KGMTNLRSLSMEGCPITA-----QSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGLINLR 315
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
T L + ++++S + FL + LE L+L S +GD+ ++ V + NLR L+LS++
Sbjct: 316 TLNLGYNELTDSGM---VFLKGLTNLERLNLDSCKVGDEGIKHVKGL-LNLRMLDLSDSE 371
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+ G+ L+G L LEIL+LS T + D +S ++ + SL +++ + I
Sbjct: 372 VGNVGLRFLSG-LKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQI--------- 421
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------------- 329
TD L AL L L+ L+L +++D + L FK L L L
Sbjct: 422 -TDT--GLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQSLELCGGGITDVGVSSIK 478
Query: 330 -----------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
N LTD SL LS + L +L++ ++ +TN+GL +P L L L
Sbjct: 479 DLTLLTSLNLSHNLRLTDRSLQYLSGMENLVSLNVANSKVTNAGLQHLRPLTKLTSLALQ 538
Query: 379 G 379
G
Sbjct: 539 G 539
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 175/392 (44%), Gaps = 64/392 (16%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQV 87
+E WL G S ++L LD+ G PVTD L LQ T L+ L L +
Sbjct: 104 VEDFWLDIIG---------SQGESLLALDISGSPVTDDGLACLQSCTNLQTLSLNSCDHI 154
Query: 88 SNRGAAVLKMFPRLSFLNL------AWTGVTKLPNISSLECLNLSNCTIDSILEGN---- 137
S+ G +VL L+ L+L G+ N+ SL+ L+L C ++ G
Sbjct: 155 SDEGLSVLSGLSNLTTLSLRSSNLITAAGMRNFTNLVSLKNLDLERC---PLIHGGFVYL 211
Query: 138 ENKAPLAKISLAGTTFINERE-----AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE- 191
L K+++ + + + ++ +S V++S ++ +T +++L
Sbjct: 212 RGLTTLEKLNVGWCIGVRNADITHLAGIVNLKELQISRSKVNDSGVASLKGMTNLRSLSM 271
Query: 192 --------------------HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
HL+++S + D + + + NLR LNL + +G+
Sbjct: 272 EGCPITAQSMKTIAGLTTLCHLNINSCYLPDSGCQKLEGL-INLRTLNLGYNELTDSGMV 330
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
L G L NLE L+L ++ D I ++ + +L+ +D+S++++ VG L
Sbjct: 331 FLKG-LTNLERLNLDSCKVGDEGIKHVKGLLNLRMLDLSDSEVG----NVG--------L 377
Query: 292 TALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L LE LNL T V+D L ++T L L+L + +TD L L+ L+ L N
Sbjct: 378 RFLSGLKKLEILNLSFTGGVTDIGLSTIATITSLTSLNLDSKQITDTGLAALTGLTGLKN 437
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + A +T+ G+ + ++L+ L+L GG +
Sbjct: 438 LDLFGAKITDYGMARLRHFKNLQSLELCGGGI 469
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 166/377 (44%), Gaps = 51/377 (13%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP-VTDLVLRSLQ 72
VTD G+ L S + L+ L L+ +D G+++LS L NL+ L L +T +R+
Sbjct: 129 VTDDGLACLQSCTNLQTLSLNSCDHISDEGLSVLSGLSNLTTLSLRSSNLITAAGMRNFT 188
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 126
L L+ LDL + + G L+ L LN+ W +T L I +L+ L +S
Sbjct: 189 NLVSLKNLDLERCPLIHGGFVYLRGLTTLEKLNVGWCIGVRNADITHLAGIVNLKELQIS 248
Query: 127 NCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 185
+ DS + + L +S+ G ++ S+ LT
Sbjct: 249 RSKVNDSGVASLKGMTNLRSLSMEGCP--------------------ITAQSMKTIAGLT 288
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
L HL+++S + D + + + NLR LNL + +G+ L G L NLE L+L
Sbjct: 289 ---TLCHLNINSCYLPDSGCQKLEGL-INLRTLNLGYNELTDSGMVFLKG-LTNLERLNL 343
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGF---------------IQQVGAETDLVLS 290
++ D I ++ + +L+ +D+S++++ + G TD+ LS
Sbjct: 344 DSCKVGDEGIKHVKGLLNLRMLDLSDSEVGNVGLRFLSGLKKLEILNLSFTGGVTDIGLS 403
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
A + L LNL+ Q++D L L+ L +L L A +TD + +L L +
Sbjct: 404 TIA--TITSLTSLNLDSKQITDTGLAALTGLTGLKNLDLFGAKITDYGMARLRHFKNLQS 461
Query: 351 LSIRDAVLTNSGLGSFK 367
L + +T+ G+ S K
Sbjct: 462 LELCGGGITDVGVSSIK 478
>gi|195647464|gb|ACG43200.1| regulatory subunit [Zea mays]
Length = 581
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 174/356 (48%), Gaps = 42/356 (11%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C +TD+ MK+L ++ L +L LS ++A G++ L L L L+L G VT + L +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVI 302
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 126
L L L+L + + G LK +L L+L + +T L ++ +LECLNL
Sbjct: 303 SELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLD 362
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
+C I G+E L + + ++ LS +V ++ L L+
Sbjct: 363 SCKI-----GDEGLFHL--------------KGLIQLKNLELSDTEVGSNGLRH---LSG 400
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L G L L L L
Sbjct: 401 LRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASLTG-LTGLTHLDLF 458
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +I D +S +++ +++ G I G + +++L L LNL
Sbjct: 459 GARITDSGMSCFRFFKNIQSLEVCG----GLITDAGVKN--------IKDLKALTLLNLS 506
Query: 307 QT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
Q +++D TL +S L+ L++ N+ ++++ LH L L L +LS+ +T S
Sbjct: 507 QNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQNLRSLSLESCRVTAS 562
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 186/428 (43%), Gaps = 86/428 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL---- 58
++ L C ++++ G+K L S L L + + +TA+G ++L NL LDL
Sbjct: 161 MQNLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLG 338
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
F +A L L + LE L+L S IGD+ + + +
Sbjct: 339 FNQITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL- 377
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L+NL LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N
Sbjct: 378 IQLKNLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNR 436
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---------------------VS 311
I +T L SLT L L HL+ T ++
Sbjct: 437 QI--------TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLIT 487
Query: 312 DATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
DA + + K L L+L +N LTD +L +S L+ L +L++ ++ ++N GL KP +
Sbjct: 488 DAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNLGLHHLKPLQ 547
Query: 371 SLKLLDLH 378
+L+ L L
Sbjct: 548 NLRSLSLE 555
>gi|116310796|emb|CAH67587.1| OSIGBa0112M24.4 [Oryza sativa Indica Group]
gi|218195159|gb|EEC77586.1| hypothetical protein OsI_16540 [Oryza sativa Indica Group]
Length = 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 66/380 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L+L C +TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G V
Sbjct: 235 LEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAV 294
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + L L L+L V + G L+ +L LNL + +T L +
Sbjct: 295 TAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELI 354
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LECLNL +C I G+E A L + L + + LS +V ++ L
Sbjct: 355 NLECLNLDSCKI-----GDEGLAHL--------------KGLLKLRSLELSDTEVGSNGL 395
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHL 237
L+ ++ L+ ++LS +++ D ++ ++ G N LR+LNL N + + G+ L L
Sbjct: 396 RH---LSGLRNLQSINLSFTLVTDIGLKKIS--GLNSLRSLNLDNRQITDNGLAALTC-L 449
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L L L G +I D + + +L+ +++ G I G + +++L
Sbjct: 450 TGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCG----GLITDAGVKN--------IKDL 497
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L LNL Q N +LTD SL +S L+ L +L++ ++
Sbjct: 498 KALTLLNLSQ-----------------------NGNLTDKSLELISGLTALVSLNVSNSR 534
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
++NSGL KP ++L+ L L
Sbjct: 535 VSNSGLHHLKPLQNLRSLSL 554
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 170/389 (43%), Gaps = 81/389 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
M L LDL RC K+ G+ HL + LEKL L G+T + LS L NL L L
Sbjct: 208 MVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS 266
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++DL + L+ L+KL +L+L G V+ AA L++ + ++S
Sbjct: 267 CCKISDLGVSYLRGLSKLAHLNLEGCAVT---AACLEV----------------ISGLAS 307
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L LNLS C + EG E+ L K+ + F YI + L L
Sbjct: 308 LVLLNLSRCGVYD--EGCEHLEGLVKLKVLNL-------GFNYITDACLVHL-------- 350
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
++ LE L+L S IGD+ + + + LR+L LS+T S G+ L+G L N
Sbjct: 351 -----KELINLECLNLDSCKIGDEGLAHLKGL-LKLRSLELSDTEVGSNGLRHLSG-LRN 403
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ ++LS T + D + +S LN
Sbjct: 404 LQSINLSFTLVTDIGLKKIS------------------------------------GLNS 427
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L LNL+ Q++D L L+ L HL L A +TD + L L +L + ++T
Sbjct: 428 LRSLNLDNRQITDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLIT 487
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
++G+ + K ++L LL+L LT+ ++
Sbjct: 488 DAGVKNIKDLKALTLLNLSQNGNLTDKSL 516
>gi|115459280|ref|NP_001053240.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|113564811|dbj|BAF15154.1| Os04g0503500 [Oryza sativa Japonica Group]
gi|215678755|dbj|BAG95192.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708842|dbj|BAG94111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629150|gb|EEE61282.1| hypothetical protein OsJ_15365 [Oryza sativa Japonica Group]
Length = 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 66/380 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L+L C +TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G V
Sbjct: 235 LEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAV 294
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + L L L+L V + G L+ +L LNL + +T L +
Sbjct: 295 TAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELI 354
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LECLNL +C I G+E A L + L + + LS +V ++ L
Sbjct: 355 NLECLNLDSCKI-----GDEGLAHL--------------KGLLKLRSLELSDTEVGSNGL 395
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHL 237
L+ ++ L+ ++LS +++ D ++ ++ G N LR+LNL N + + G+ L L
Sbjct: 396 RH---LSGLRNLQSINLSFTLVTDIGLKKIS--GLNSLRSLNLDNRQITDNGLAALTC-L 449
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L L L G +I D + + +L+ +++ G I G + +++L
Sbjct: 450 TGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCG----GLITDAGVKN--------IKDL 497
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L LNL Q N +LTD SL +S L+ L +L++ ++
Sbjct: 498 KALTLLNLSQ-----------------------NGNLTDKSLELISRLTALVSLNVSNSR 534
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
++NSGL KP ++L+ L L
Sbjct: 535 VSNSGLHHLKPLQNLRSLSL 554
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 170/389 (43%), Gaps = 81/389 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
M L LDL RC K+ G+ HL + LEKL L G+T + LS L NL L L
Sbjct: 208 MVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS 266
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++DL + L+ L+KL +L+L G V+ AA L++ + ++S
Sbjct: 267 CCKISDLGVSYLRGLSKLAHLNLEGCAVT---AACLEV----------------ISGLAS 307
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L LNLS C + EG E+ L K+ + F YI + L L
Sbjct: 308 LVLLNLSRCGVYD--EGCEHLEGLVKLKVLNL-------GFNYITDACLVHL-------- 350
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
++ LE L+L S IGD+ + + + LR+L LS+T S G+ L+G L N
Sbjct: 351 -----KELINLECLNLDSCKIGDEGLAHLKGL-LKLRSLELSDTEVGSNGLRHLSG-LRN 403
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ ++LS T + D + +S LN
Sbjct: 404 LQSINLSFTLVTDIGLKKIS------------------------------------GLNS 427
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L LNL+ Q++D L L+ L HL L A +TD + L L +L + ++T
Sbjct: 428 LRSLNLDNRQITDNGLAALTCLTGLTHLDLFGARITDAGTNCLKYFKNLQSLEVCGGLIT 487
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
++G+ + K ++L LL+L LT+ ++
Sbjct: 488 DAGVKNIKDLKALTLLNLSQNGNLTDKSL 516
>gi|383455271|ref|YP_005369260.1| hypothetical protein COCOR_03284 [Corallococcus coralloides DSM
2259]
gi|380733131|gb|AFE09133.1| leucine-rich repeat-containing protein [Corallococcus coralloides
DSM 2259]
Length = 614
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 176/368 (47%), Gaps = 24/368 (6%)
Query: 32 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
L LSET L + +A L++ L L L G VTD L SLQ + L L L + VS+RG
Sbjct: 134 LHLSETALGDEHLAALANATRLQALHLDGTRVTDAGLASLQGMPHLAVLRLDATAVSDRG 193
Query: 92 AAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
A+L L L+L+ T V+ L + LE L+LS+ T+D + + L +
Sbjct: 194 LALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLSDTTVDDTVLASLPGERLRTL 253
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDS 204
++GT N L L +L ++ +S+S L ++ L+ L L S+ + D
Sbjct: 254 VMSGTHVTNAGLGALR-RMPALRWLGLARTSVSDAGLAHLGALRMLDALHLGSTGVTDAG 312
Query: 205 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 264
+ +A + A LR L LS TR GV LAG L LE+L L T I + A+ ++ + L
Sbjct: 313 LIHLARLPA-LRVLVLSKTRIRGPGVRHLAG-LTQLEVLHLDDTSIGNAALRHLQGLQHL 370
Query: 265 KFIDISNTDIKG----------FIQQVGAETDLVL---SLTALQNLNHLERLNLEQTQVS 311
+ +++S T + G ++ +G + L L SL AL+ L L RL+L T++
Sbjct: 371 RDLELSRTAVTGSGLPALSGLQALESLGL-SGLALEDASLAALEPLERLSRLDLSATRIG 429
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
L L + L HL L D + L + ++L +L +LT+ GLG R
Sbjct: 430 PEALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQLQSLRAIRTILTDLGLGQLSELRE 489
Query: 372 LKLLDLHG 379
L+ L + G
Sbjct: 490 LESLQVSG 497
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 168/378 (44%), Gaps = 56/378 (14%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
V+D G+ L S++TL +L LS T ++ G+ LL++ L LDL V D VL SL
Sbjct: 186 ATAVSDRGLALLASLTTLRRLSLSGTSVSPRGLGLLAAQTELEWLDLSDTTVDDTVLASL 245
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 131
+L L + G+ V+N G L+ P L +L LA T V+ ++ L L + +D
Sbjct: 246 PG-ERLRTLVMSGTHVTNAGLGALRRMPALRWLGLARTSVSD-AGLAHLGALRM----LD 299
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
++ G+ ++ AG + A + +LS + + LTQ++ L
Sbjct: 300 ALHLGSTG------VTDAGLIHLARLPALRVL---VLSKTRIRGPGVRHLAGLTQLEVL- 349
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
HLD +S IG+ ++ + + +LR+L LS T + +G+ L+G L LE L LSG ++
Sbjct: 350 HLDDTS--IGNAALRHLQGL-QHLRDLELSRTAVTGSGLPALSG-LQALESLGLSGLALE 405
Query: 252 DYAISYMSMMPSLKFIDISNTDIK-------------------------GFIQQVGAETD 286
D +++ + + L +D+S T I G++ + T
Sbjct: 406 DASLAALEPLERLSRLDLSATRIGPEALKQLGSRMVLRHLDLSRTDFNDGWVATLQTFTQ 465
Query: 287 LV-----------LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 335
L L L L L LE L + +S + L PL L+ L L +T
Sbjct: 466 LQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGSGLVPLQKLPHLVKLDLGGTWMT 525
Query: 336 DVSLHQLSSLSKLTNLSI 353
D L+ KL+ LS+
Sbjct: 526 DDGARLLAGFEKLSWLSL 543
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 165/379 (43%), Gaps = 62/379 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+ L L+R V+DAG+ HL ++ L+ L L TG+T G+ L+ L L VL L
Sbjct: 271 MPALRWLGLART-SVSDAGLAHLGALRMLDALHLGSTGVTDAGLIHLARLPALRVLVLSK 329
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNIS 118
+ +R L LT+LE L L + + N L+ L L L+ T VT LP +S
Sbjct: 330 TRIRGPGVRHLAGLTQLEVLHLDDTSIGNAALRHLQGLQHLRDLELSRTAVTGSGLPALS 389
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L+ L E+ LS L + ++SL
Sbjct: 390 GLQAL----------------------------------------ESLGLSGLALEDASL 409
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
L ++ L LDLS++ IG ++++ + LR+L+LS T F+ V L
Sbjct: 410 ---AALEPLERLSRLDLSATRIGPEALKQLGSR-MVLRHLDLSRTDFNDGWVATLQ-TFT 464
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L+ L T + D + +S + L+ + +S I G L LQ L
Sbjct: 465 QLQSLRAIRTILTDLGLGQLSELRELESLQVSGNPISGS------------GLVPLQKLP 512
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
HL +L+L T ++D L+ F++L LSL + D SL L S LT +R V
Sbjct: 513 HLVKLDLGGTWMTDDGARLLAGFEKLSWLSLAGTRIGDESLVHLPG-SLLTLYLLRTKV- 570
Query: 359 TNSGLGSFKPPRSLKLLDL 377
T++G+ + L+ +DL
Sbjct: 571 TDAGMPALHRLPLLREIDL 589
>gi|388500850|gb|AFK38491.1| unknown [Medicago truncatula]
Length = 577
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C +TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G
Sbjct: 228 LTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEG 287
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLP 115
VT L SL L L L+L +S RG +L LNL + + +
Sbjct: 288 CLVTSACLDSLSELPALSNLNLNRCNISGRGCERFSRLEKLKVLNLGFNDIGDRCLAHMK 347
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ LE LNL +C I EG EN LAG + + +E LS +V N
Sbjct: 348 GLTKLESLNLDSCKIGD--EGLEN--------LAG------HKQLICLE---LSDTEVGN 388
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L L+ + +LE ++LS +++ D + + C ++L++LNL + + AG+ L
Sbjct: 389 HGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGLSSLKSLNLDAYQITDAGLATLTS 444
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L L G +I D +Y+ +L+ ++I + G + G + ++
Sbjct: 445 -LTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICS----GGLTDAGVKN--------IK 491
Query: 296 NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ L LNL Q + ++D T+ ++ L+ L+L N +T L L +L L L++
Sbjct: 492 ELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITFAGLQHLKTLKNLRFLTLE 551
Query: 355 DAVLTNSGLGSFK 367
+T + + FK
Sbjct: 552 SCKVTVNDIKKFK 564
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 183/390 (46%), Gaps = 45/390 (11%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
L+L+ C +++D G++ + +S L L + ++A G++ S L NL LDL P
Sbjct: 160 LNLNYCDQISDHGLECISGLSNLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIH 219
Query: 66 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
LQ LTKLE L++ W + +++ L L+ L ++ + G++ L +
Sbjct: 220 GGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQK 279
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L LNL C + S A L +S L + +N L+ ++S
Sbjct: 280 LALLNLEGCLVTS--------ACLDSLSELPALSNLN------------LNRCNISGRGC 319
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
RF ++++ L+ L+L + IGD + + + L +LNL + + G+ LAGH
Sbjct: 320 ERF---SRLEKLKVLNLGFNDIGDRCLAHMKGL-TKLESLNLDSCKIGDEGLENLAGH-K 374
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L LS T++ ++ + ++S + SL+ I++S T + G L L L+
Sbjct: 375 QLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT----VVSDSG--------LRKLCGLS 422
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L+ LNL+ Q++DA L L++ L L L A +TDV + L L L I L
Sbjct: 423 SLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRPLEICSGGL 482
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
T++G+ + K SL L+L LT+ +
Sbjct: 483 TDAGVKNIKELSSLMCLNLSQNSNLTDKTV 512
>gi|46446831|ref|YP_008196.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400472|emb|CAF23921.1| hypothetical protein pc1197 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 666
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 210/424 (49%), Gaps = 36/424 (8%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS+ +TDAG+ HL ++ L+ L LS+ + LT DG+A L+ L L L L
Sbjct: 233 LTSLQRLNLSKLWCITDAGLAHLTTLKALQHLDLSQCSKLTDDGLAHLTPLTALQHLGLN 292
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L +LT L++LDL + +++ G A L L L+L+W G+
Sbjct: 293 YCENLTDAGLAHLTLLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGL 352
Query: 112 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
L +++ L+ L+LSNC D+ L + L ++L+ + + + L
Sbjct: 353 AHLTSLTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQ 412
Query: 170 FLDVSNSSLSR--FCFLTQMKALEHLDLSSS--MIGDDSVEMVACVGANLRNLNLSNT-R 224
L++S +L+ LT + L+HLDLS S +I + V L++LNL+ +
Sbjct: 413 HLNLSRYNLTYAGLAHLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVA--LQHLNLTGCWK 470
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN----TDIK-GFI 278
+ AG+ L+ L L+ L LS Q + ++++ + +L+++D+SN TD +
Sbjct: 471 LTDAGLAHLSP-LKALQTLGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHL 529
Query: 279 QQVGAETDLVLS---------LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLS 328
+ + A L L+ L L +L L+ LNL +++DA L L L HL
Sbjct: 530 RPLVALQHLNLTGCWKLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLKPLVALQHLD 589
Query: 329 LRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
L N +LTD L L L L +L++ LT+ GL P +L+ LDL + LT+
Sbjct: 590 LSNCNNLTDEGLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYNLTDAG 649
Query: 388 ILQF 391
+ F
Sbjct: 650 LAHF 653
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 34/372 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL S+ L+ L LS LT G+A L+SL L LDL
Sbjct: 308 LTGLQHLDLSNCKNLTDAGLAHLTSLMALQHLDLSWCLKLTDAGLAHLTSLTGLQHLDLS 367
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVT 112
+TD L L L L++L+L W ++++ G A L L LNL+ + G+
Sbjct: 368 NCKNLTDAGLAHLTSLMALQHLNLSWCLKLTDAGLAHLTPLTALQHLNLSRYNLTYAGLA 427
Query: 113 KLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
L +++ L+ L+LS ID+ L L ++L G + + L
Sbjct: 428 HLTSLTGLQHLDLSGSRKLIDAGLAHLRPLVALQHLNLTGCWKLTDAGLAHLSPLKALQT 487
Query: 171 LDVS---NSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNT-RF 225
L +S N + + L + AL++LDLS+ + + D + + + A L++LNL+ +
Sbjct: 488 LGLSWCQNLTGAGLAHLKPLVALQYLDLSNCNNLTDAGLAHLRPLVA-LQHLNLTGCWKL 546
Query: 226 SSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
+ AG+ L L L+ L+LS ++ D ++++ + +L+ +D+SN + + E
Sbjct: 547 TDAGLAHLTS-LMALQHLNLSWCLKLTDAGLAHLKPLVALQHLDLSNCN------NLTDE 599
Query: 285 TDLVLSLTALQNLNHLERLNLEQTQVSD---ATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
LT L+ L L+ LNL + ++D A L PL+T + L S N LTD L
Sbjct: 600 -----GLTHLRPLVALQHLNLSRYNLTDDGLAHLTPLTTLQYLDLSSCYN--LTDAGLAH 652
Query: 342 LSSLSKLTNLSI 353
+++ NL I
Sbjct: 653 FKTVAASLNLKI 664
>gi|226501144|ref|NP_001141453.1| uncharacterized protein LOC100273563 [Zea mays]
gi|194704638|gb|ACF86403.1| unknown [Zea mays]
gi|414586493|tpg|DAA37064.1| TPA: regulatory subunit [Zea mays]
Length = 581
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 173/356 (48%), Gaps = 42/356 (11%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C +TD+ MK+L ++ L +L LS ++A G++ L L L L+L G VT + L +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVI 302
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 126
L L L+L + + G LK +L L+L + +T L ++ +LECLNL
Sbjct: 303 SELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLD 362
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
+C I G+E L + + ++ LS +V ++ L L+
Sbjct: 363 SCKI-----GDEGLFHL--------------KGLIQLKNLELSDTEVGSNGLRH---LSG 400
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L G L L L L
Sbjct: 401 LRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASLTG-LTGLTHLDLF 458
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +I D +S +++ +++ G I G + +++L L LNL
Sbjct: 459 GARITDSGMSCFRFFKNIQSLEVCG----GLITDAGVKN--------IKDLKALTLLNLS 506
Query: 307 QT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
Q +++D TL +S L+ L++ N+ +++ LH L L L +LS+ +T S
Sbjct: 507 QNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCRVTAS 562
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 187/428 (43%), Gaps = 86/428 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDL---- 58
++ L C ++++ G+K L S L L + + +TA+G ++L NL LDL
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLG 338
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
F +A L L + LE L+L S IGD+ + + +
Sbjct: 339 FNQITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL- 377
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L+NL LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N
Sbjct: 378 IQLKNLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNR 436
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ---------------------VS 311
I +T L SLT L L HL+ T ++
Sbjct: 437 QI--------TDTGLA-SLTGLTGLTHLDLFGARITDSGMSCFRFFKNIQSLEVCGGLIT 487
Query: 312 DATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
DA + + K L L+L +N LTD +L +S L+ L +L++ ++ ++NSGL KP +
Sbjct: 488 DAGVKNIKDLKALTLLNLSQNGKLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLQ 547
Query: 371 SLKLLDLH 378
+L+ L L
Sbjct: 548 NLRSLSLE 555
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 184/392 (46%), Gaps = 50/392 (12%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VT 64
+DLS C VTD+G L S+++ L ++ G+ LS NL+ L + VT
Sbjct: 140 VDLS-CSDVTDSGFNLLKDCSSMQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 65 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-GVTK-----LPNIS 118
++ L L LDL N G LK +L LNL + G+T L +++
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLT 258
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L L LS+C KIS G +++ L L++ ++
Sbjct: 259 NLRELQLSSC----------------KISAFGVSYLRGLHK--------LGHLNLEGCAV 294
Query: 179 SRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ C ++++ +L L+LS I D+ E + + L+ L+L + + A + I
Sbjct: 295 TAVCLEVISELASLVLLNLSRCGICDEGCENLKGL-TKLKALSLGFNQITDACL-IHLKD 352
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L NLE L+L +I D + ++ + LK +++S+T +VG+ L L
Sbjct: 353 LVNLECLNLDSCKIGDEGLFHLKGLIQLKNLELSDT-------EVGSN-----GLRHLSG 400
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L +L+ +NL T V+D L +S L L+L N +TD L L+ L+ LT+L + A
Sbjct: 401 LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTGLTGLTHLDLFGA 460
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+T+SG+ F+ ++++ L++ GG L+T+ +
Sbjct: 461 RITDSGMSCFRFFKNIQSLEVCGG-LITDAGV 491
>gi|125540271|gb|EAY86666.1| hypothetical protein OsI_08050 [Oryza sativa Indica Group]
Length = 582
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 78/398 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLP 62
L LDL RC+K+ G+ HL + LE L + AD I LS L NL L L
Sbjct: 212 LVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCR 270
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+TDL + L+ L+KL L+L G V+ AA L+ + ++SL
Sbjct: 271 ITDLGVSYLRGLSKLTQLNLEGCPVT---AACLE----------------AISGLASLVV 311
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
LNLS C I EG EN L K+ + L F ++++ L+
Sbjct: 312 LNLSRCGIYG--EGCENFQGLKKLKVLN-----------------LGFNNITDDCLAH-- 350
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L ++ LE L+L S +GD+ + + L++L LS+T S+G+ L+G L NLE
Sbjct: 351 -LKELINLESLNLDSCKVGDEGLLHLR-GLMLLKSLELSDTEVGSSGLQHLSG-LRNLES 407
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLE 301
++LS T + D + +S + SLK +++ N I TD+ L+ LT+L L HL+
Sbjct: 408 INLSFTLVTDTGMKKISALNSLKSVNLDNRQI----------TDVGLAALTSLTGLTHLD 457
Query: 302 RL----------------NLEQTQV-----SDATLFPLSTFKELIHLSL-RNASLTDVSL 339
NLE +V +DA + + K L L+L +N +LTD +L
Sbjct: 458 LFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLSQNVNLTDKTL 517
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+S L+ L +L++ + ++N+GL K ++L+ L L
Sbjct: 518 ELISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSLSL 555
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 54/365 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C + D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PV
Sbjct: 236 LESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPV 295
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L ++ L L L+L + G + +L LNL + +T L +
Sbjct: 296 TAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELI 355
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C + G+E L + L + +++ E V +S L
Sbjct: 356 NLESLNLDSCKV-----GDEGLLHLRGLMLLKSLELSDTE--------------VGSSGL 396
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
L+ ++ LE ++LS +++ D ++ ++ + + L+++NL N + + G+ L L
Sbjct: 397 QH---LSGLRNLESINLSFTLVTDTGMKKISALNS-LKSVNLDNRQITDVGLAALTS-LT 451
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I DY S +L+ +++ G I G + + L AL+ LN
Sbjct: 452 GLTHLDLFGARITDYGTSCFRFFKNLESLEVCG----GLITDAGVKN--IKDLKALKQLN 505
Query: 299 -------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
L LN+ T++S+A L L + L LSL + +T +
Sbjct: 506 LSQNVNLTDKTLELISGLTALVSLNVSNTRISNAGLRHLKDLQNLRSLSLDSCRVTTSEV 565
Query: 340 HQLSS 344
+L +
Sbjct: 566 KKLQA 570
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 174/393 (44%), Gaps = 70/393 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP 62
++ L + C +++ G+ L +S L L + S G+TA+ + ++L NL LDL
Sbjct: 162 MQSLACNYCDMISEHGLGILSGLSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCL 221
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L L+ L LE L++ + + +++ L L L LA GV+ L
Sbjct: 222 KIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRG 281
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSN 175
+S L LNL C + + A L IS LA +N +Y E
Sbjct: 282 LSKLTQLNLEGCPVTA--------ACLEAISGLASLVVLNLSRCGIYGE----------- 322
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
F +K L+ L+L + I DD + A+L+
Sbjct: 323 -GCENF---QGLKKLKVLNLGFNNITDDCL-------AHLK------------------- 352
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L NLE L+L ++ D + ++ + LK +++S+T +VG+ L L
Sbjct: 353 ELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDT-------EVGSS-----GLQHLS 400
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L +LE +NL T V+D + +S L ++L N +TDV L L+SL+ LT+L +
Sbjct: 401 GLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFG 460
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
A +T+ G F+ ++L+ L++ GG L+T+ +
Sbjct: 461 ARITDYGTSCFRFFKNLESLEVCGG-LITDAGV 492
>gi|357164542|ref|XP_003580088.1| PREDICTED: insulin-like growth factor-binding protein complex acid
labile subunit-like [Brachypodium distachyon]
Length = 580
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 173/365 (47%), Gaps = 44/365 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C +TD+ MK+L ++ L +L LS ++ G++ L L L+ L+L G V
Sbjct: 234 LETLNMRYCNCITDSDMKYLSDLTNLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAV 293
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L ++ L L L+L + + G L+ +L LNL + +T L +
Sbjct: 294 TAACLEAISGLASLILLNLNRCGIYDEGCENLEGLVKLKVLNLGFNHITDACLVHLKELV 353
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
SLECLNL +C I G+E G + +E LS +V ++ L
Sbjct: 354 SLECLNLDSCKI-----GDE-----------GLLHLKGLLQLRSLE---LSDTEVGSNGL 394
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHL 237
L+ ++ L+ ++LS +++ D ++ VA G N L++LNL N + + G+ LAG L
Sbjct: 395 RH---LSGLRNLQSMNLSFTLVTDIGLKKVA--GLNSLKSLNLDNRQITDNGLAALAG-L 448
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L L L G +I D + + L+ +++ G I G + +++L
Sbjct: 449 TGLTHLDLFGARITDSGTNCLRYFKELQSLELCG----GLITDAGVKN--------IKDL 496
Query: 298 NHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L LNL Q ++D TL +S L+ L+L N +++ LH L L L +LS+
Sbjct: 497 KALTLLNLSQNGNLTDRTLELISGLTALVSLNLSNTRVSNAGLHHLKLLQNLRSLSLDSC 556
Query: 357 VLTNS 361
+T S
Sbjct: 557 KVTAS 561
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 179/405 (44%), Gaps = 67/405 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
L L L +C VT G K + L L L G+ L L+ L L++
Sbjct: 185 LTSLSLKKCAAVTAEGAKAFADLVNLVNLDLERCPKIHGGLVHLKGLRKLETLNMRYCNC 244
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNI 117
+TD ++ L LT L L L ++S+ G + LK +L+ LNL VT + +
Sbjct: 245 ITDSDMKYLSDLTNLRELQLSCCKISDIGVSYLKGLSKLAHLNLEGCAVTAACLEAISGL 304
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+SL LNL+ C I EG EN L K+ + F + +A L
Sbjct: 305 ASLILLNLNRCGIYD--EGCENLEGLVKLKVLNLGFNHITDACLV--------------- 347
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
L ++ +LE L+L S IGD+ + + LR+L LS+T S G+ L+G L
Sbjct: 348 -----HLKELVSLECLNLDSCKIGDEGLLHLK-GLLQLRSLELSDTEVGSNGLRHLSG-L 400
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
NL+ ++LS T + D + ++ + SLK +++ N I TD L AL L
Sbjct: 401 RNLQSMNLSFTLVTDIGLKKVAGLNSLKSLNLDNRQI----------TDN--GLAALAGL 448
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------------------------RNA 332
L L+L +++D+ L FKEL L L +N
Sbjct: 449 TGLTHLDLFGARITDSGTNCLRYFKELQSLELCGGLITDAGVKNIKDLKALTLLNLSQNG 508
Query: 333 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+LTD +L +S L+ L +L++ + ++N+GL K ++L+ L L
Sbjct: 509 NLTDRTLELISGLTALVSLNLSNTRVSNAGLHHLKLLQNLRSLSL 553
>gi|115447277|ref|NP_001047418.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|47497632|dbj|BAD19701.1| leucine-rich repeat-like protein [Oryza sativa Japonica Group]
gi|113536949|dbj|BAF09332.1| Os02g0613200 [Oryza sativa Japonica Group]
gi|125582867|gb|EAZ23798.1| hypothetical protein OsJ_07510 [Oryza sativa Japonica Group]
gi|215704406|dbj|BAG93840.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 582
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 78/398 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLP 62
L LDL RC+K+ G+ HL + LE L + AD I LS L NL L L
Sbjct: 212 LVNLDLERCLKI-HGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCR 270
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+TDL + L+ L+KL L+L G V+ AA L+ + ++SL
Sbjct: 271 ITDLGVSYLRGLSKLTQLNLEGCPVT---AACLE----------------AISGLASLVV 311
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
LNLS C I EG EN L K+ + L F ++++ L+
Sbjct: 312 LNLSRCGIYG--EGCENFQGLKKLKVLN-----------------LGFNNITDDCLAH-- 350
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L ++ LE L+L S +GD+ + + L++L LS+T S+G+ L+G L NLE
Sbjct: 351 -LKELINLESLNLDSCKVGDEGLLHLR-GLMLLKSLELSDTEVGSSGLQHLSG-LRNLES 407
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLE 301
++LS T + D + +S + SLK +++ N I TD+ L+ LT+L L HL+
Sbjct: 408 INLSFTLVTDTGMKKISALNSLKSVNLDNRQI----------TDVGLAALTSLTGLTHLD 457
Query: 302 RL----------------NLEQTQV-----SDATLFPLSTFKELIHLSL-RNASLTDVSL 339
NLE +V +DA + + K L L+L +N +LTD +L
Sbjct: 458 LFGARITDYGTSCFRFFKNLESLEVCGGLITDAGVKNIKDLKALKQLNLSQNVNLTDKTL 517
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+S L+ L +L++ + ++N+GL K ++L+ L L
Sbjct: 518 ELISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSLSL 555
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 54/365 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C + D+ +K+L ++ L++L L+ +T G++ L L L+ L+L G PV
Sbjct: 236 LESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRGLSKLTQLNLEGCPV 295
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L ++ L L L+L + G + +L LNL + +T L +
Sbjct: 296 TAACLEAISGLASLVVLNLSRCGIYGEGCENFQGLKKLKVLNLGFNNITDDCLAHLKELI 355
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C + G+E L + L + +++ E V +S L
Sbjct: 356 NLESLNLDSCKV-----GDEGLLHLRGLMLLKSLELSDTE--------------VGSSGL 396
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
L+ ++ LE ++LS +++ D ++ ++ + + L+++NL N + + G+ L L
Sbjct: 397 QH---LSGLRNLESINLSFTLVTDTGMKKISALNS-LKSVNLDNRQITDVGLAALTS-LT 451
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I DY S +L+ +++ G I G + + L AL+ LN
Sbjct: 452 GLTHLDLFGARITDYGTSCFRFFKNLESLEVCG----GLITDAGVKN--IKDLKALKQLN 505
Query: 299 -------------------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
L LN+ T+VS+A L L + L LSL + +T +
Sbjct: 506 LSQNVNLTDKTLELISGLTALVSLNVSNTRVSNAGLRHLKDLQNLRSLSLDSCRVTTSEV 565
Query: 340 HQLSS 344
+L +
Sbjct: 566 KKLQA 570
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 174/393 (44%), Gaps = 70/393 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP 62
++ L + C +++ G+ L +S L L + S G+TA+ + ++L NL LDL
Sbjct: 162 MQSLACNYCDMISEHGLGILSGLSNLTSLSFKSSDGITAEAMEAFANLVNLVNLDLERCL 221
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L L+ L LE L++ + + +++ L L L LA GV+ L
Sbjct: 222 KIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYLSDLTNLKELQLACCRITDLGVSYLRG 281
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSN 175
+S L LNL C + + A L IS LA +N +Y E
Sbjct: 282 LSKLTQLNLEGCPVTA--------ACLEAISGLASLVVLNLSRCGIYGE----------- 322
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
F +K L+ L+L + I DD + A+L+
Sbjct: 323 -GCENF---QGLKKLKVLNLGFNNITDDCL-------AHLK------------------- 352
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L NLE L+L ++ D + ++ + LK +++S+T +VG+ L L
Sbjct: 353 ELINLESLNLDSCKVGDEGLLHLRGLMLLKSLELSDT-------EVGSS-----GLQHLS 400
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L +LE +NL T V+D + +S L ++L N +TDV L L+SL+ LT+L +
Sbjct: 401 GLRNLESINLSFTLVTDTGMKKISALNSLKSVNLDNRQITDVGLAALTSLTGLTHLDLFG 460
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
A +T+ G F+ ++L+ L++ GG L+T+ +
Sbjct: 461 ARITDYGTSCFRFFKNLESLEVCGG-LITDAGV 492
>gi|290973802|ref|XP_002669636.1| predicted protein [Naegleria gruberi]
gi|284083186|gb|EFC36892.1| predicted protein [Naegleria gruberi]
Length = 548
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 163/371 (43%), Gaps = 35/371 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK+L+L ++ + G KH+ S++ L L L + G+ +G LSSL NL+ L+LG
Sbjct: 138 LTNLKKLNLGH-NEIGNDGAKHVSSLTHLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGN 196
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLP 115
+ D + LT L L+L +++ G L+ +L+ L+L + GV L
Sbjct: 197 NEIGDAGAEHISSLTNLTQLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGYEGVNNLS 256
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL----LSFL 171
+ +L+ LNL N I +G E L + T ++ R L +L L
Sbjct: 257 ELKNLKKLNLGNNRITG--DGAERLCGLENL-----TELDLRAEHLSQLKNLTQINLCLN 309
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ + R C LT L L+L S++IG E + C NL L+L R G
Sbjct: 310 QIGPNGAERLCELTN---LTQLNLRSNLIGAIKAESL-CKLENLTQLDLGYNRIEDDGAQ 365
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
L+ L L L LSG QI +S + +L +D++ I+ Q
Sbjct: 366 RLS-KLKKLTQLDLSGNQIGSIGAQSLSELTNLTHLDLNGNGIEDGAQH----------- 413
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L RL L ++ D LS +L HLSL N + D LS L +T L
Sbjct: 414 --LSKLKKLTRLGLNDNRIGDDGAKYLSELNKLTHLSLDNNGIGDTGAECLSKLKNITYL 471
Query: 352 SIRDAVLTNSG 362
S+ D + +G
Sbjct: 472 SLDDNEIETAG 482
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
G ++ L NL L L +I + +S + +LK +++ + +I GA+ V
Sbjct: 107 CGTISTKLVNLTQLDLCRNKIKPTVVKGLSSLTNLKKLNLGHNEIG----NDGAKH--VS 160
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
SLT HL L+L + LS+ L L+L N + D +SSL+ LT
Sbjct: 161 SLT------HLTALDLFDNGIGPNGAQRLSSLTNLTQLNLGNNEIGDAGAEHISSLTNLT 214
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
L++R L +G+ S + + L LDL G + E
Sbjct: 215 QLNLRITKLGANGVKSLRGLKKLTELDLSGNQIGYE 250
>gi|325110089|ref|YP_004271157.1| hypothetical protein Plabr_3538 [Planctomyces brasiliensis DSM
5305]
gi|324970357|gb|ADY61135.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 451
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 25/366 (6%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R V+ D + HL +++L+L G T+ G++ L L +L +L L + D L
Sbjct: 91 RSVEAADDALTHLTGTPQVQELYLFGPGFTSAGMSDLQGLNDLRLLSLEKTLIDDAGLVE 150
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
+ + L L L + VS+ G L +L L+L +T G+ L + S+ + L
Sbjct: 151 IGRIPSLVALRLRQTDVSDEGLKALGGLDKLRELDLRFTNISDEGLPALAELDSISTVKL 210
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI--ETSLLSFLDVSNSSL--SRF 181
I EG + A + I G N L E S L L++ ++ + +
Sbjct: 211 DRTKISD--EGVKTLAAIPTIRGLGLNLTNLTNTALEALKERSELVTLEMDDTQIDDAGI 268
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
L M L++L L +GD+ E++ + +L+ L++ +T S AG LA +L NLE
Sbjct: 269 VHLEGMSNLQNLSLRRDDVGDEGFEIIGKL-KSLKRLSIRDTVISDAGCAHLA-NLENLE 326
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L L+ T I D ++++ + +LK +++ T I LQNL L
Sbjct: 327 TLDLNETFIGDEGVAHLGGLKNLKTLELWFTRIT------------PQGTAPLQNLTALR 374
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
LNLE T++ D+ L PL+ EL L+L+ +TD L L L L + + + +++
Sbjct: 375 ELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLHGLKNLEFVHLGNTQVSDE 434
Query: 362 GLGSFK 367
G + K
Sbjct: 435 GTDALK 440
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 202 DDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
D S E + +G LR L+L T S G+ LA L ++ + L T+I D + ++
Sbjct: 166 DVSDEGLKALGGLDKLRELDLRFTNISDEGLPALA-ELDSISTVKLDRTKISDEGVKTLA 224
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
+P+++ + ++ T++ +L AL+ + L L ++ TQ+ DA + L
Sbjct: 225 AIPTIRGLGLNLTNLTNT------------ALEALKERSELVTLEMDDTQIDDAGIVHLE 272
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L +LSLR + D + L L LSIRD V++++G +L+ LDL+
Sbjct: 273 GMSNLQNLSLRRDDVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLENLETLDLNE 332
Query: 380 GWLLTED-AILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLR 426
++ E A L K +E+W + I P P + T+LR
Sbjct: 333 TFIGDEGVAHLGGLKNLKTLELW--FTRITPQ----GTAPLQNLTALR 374
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ LK L + V ++DAG HL ++ LE L L+ET + +G+A L L+NL L+L
Sbjct: 298 LKSLKRLSIRDTV-ISDAGCAHLANLENLETLDLNETFIGDEGVAHLGGLKNLKTLELWF 356
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+T LQ LT L L+L +++ + L L LNL T G+ L
Sbjct: 357 TRITPQGTAPLQNLTALRELNLEDTRIDDSALEPLAGLTELRTLNLKLTPITDEGLVHLH 416
Query: 116 NISSLECLNLSNCTI 130
+ +LE ++L N +
Sbjct: 417 GLKNLEFVHLGNTQV 431
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ L+ L L R V D G + + + +L++L + +T ++ G A L++L+NL LDL
Sbjct: 274 MSNLQNLSLRRD-DVGDEGFEIIGKLKSLKRLSIRDTVISDAGCAHLANLENLETLDLNE 332
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
+ D + L L L+ L+LW ++++ +G A L+ L LNL T + L
Sbjct: 333 TFIGDEGVAHLGGLKNLKTLELWFTRITPQGTAPLQNLTALRELNLEDTRIDDSALEPLA 392
Query: 116 NISSLECLNL 125
++ L LNL
Sbjct: 393 GLTELRTLNL 402
>gi|182407840|gb|ACB87911.1| F-box-containing protein 1 [Malus x domestica]
Length = 580
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 200/425 (47%), Gaps = 80/425 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL---- 58
L+ L + C V++ G+KH+ +S L L + ++A+G+ S L NL LDL
Sbjct: 160 LQALAYNYCDHVSEQGLKHISGLSNLTSLSFKRSDAISAEGMRAFSGLLNLEKLDLERCS 219
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GG +TD L+++ L L L L +++ G + LK
Sbjct: 220 AIHGGFVHLKGLKKLKSLNVRCCRCITDSDLKTISGLIDLNELQLSNCNITDSGISYLKG 279
Query: 98 FPRLSFLNLAWTGVTK--LPNISSLECL---NLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL VT L +IS+L L NL+ C++ EG + + L + +
Sbjct: 280 LHKLRMLNLEGCNVTASCLQSISALVALAYLNLNRCSLSD--EGCDKFSGLTNLKVLS-- 335
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
L F +++++ L +L + +LE L+L S IGD+ + +A +
Sbjct: 336 ---------------LGFNEITDACLM---YLKGLTSLESLNLDSCKIGDEGLANLAGL- 376
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
+L+NL LS+T S G+ L+G L NLE L+LS T + D ++ +S + SLK + N
Sbjct: 377 THLKNLELSDTEVGSNGLRHLSG-LKNLESLNLSFTLVTDSSLKRLSGLTSLKSL---NL 432
Query: 273 DIKGFIQQVGAETDLVLSLTALQNL------------NHLERL-NLEQTQVSDATL--FP 317
D + Q A + SLT L +L NHL+ NL+ ++ L
Sbjct: 433 DAR---QITDAGLAAITSLTGLTHLDLFGARISDSGANHLKYFKNLQSLEICGGGLTDAG 489
Query: 318 LSTFKELIHLSL----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
+ K+L+ L+ +N +LT+ SL +S L+ L +L++ ++ +TN GL KP ++L+
Sbjct: 490 VKNIKDLVCLTWLNISQNCNLTNKSLELISGLTALVSLNVSNSRITNEGLQHLKPLKNLR 549
Query: 374 LLDLH 378
L L
Sbjct: 550 SLTLE 554
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 44/377 (11%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLPVTDLV----L 68
+VTD+G+ L S L+ L + ++ G+ +S L NL+ L +D + +
Sbjct: 145 EVTDSGLALLKGCSNLQALAYNYCDHVSEQGLKHISGLSNLTSLSF---KRSDAISAEGM 201
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
R+ L LE LDL R +A+ F++L K N+ C+ S+
Sbjct: 202 RAFSGLLNLEKLDL------ERCSAI-----HGGFVHLKGLKKLKSLNVRCCRCITDSDL 250
Query: 129 -TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LT 185
TI +++ NE + I+ +G +++ L L++ +++ C ++
Sbjct: 251 KTISGLIDLNELQLSNCNITDSGISYLKGLHK--------LRMLNLEGCNVTASCLQSIS 302
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+ AL +L+L+ + D+ + + + NL+ L+L + A + L G L +LE L+L
Sbjct: 303 ALVALAYLNLNRCSLSDEGCDKFSGL-TNLKVLSLGFNEITDACLMYLKG-LTSLESLNL 360
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
+I D ++ ++ + LK +++S+T +VG+ L L L +LE LNL
Sbjct: 361 DSCKIGDEGLANLAGLTHLKNLELSDT-------EVGSN-----GLRHLSGLKNLESLNL 408
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 365
T V+D++L LS L L+L +TD L ++SL+ LT+L + A +++SG
Sbjct: 409 SFTLVTDSSLKRLSGLTSLKSLNLDARQITDAGLAAITSLTGLTHLDLFGARISDSGANH 468
Query: 366 FKPPRSLKLLDLHGGWL 382
K ++L+ L++ GG L
Sbjct: 469 LKYFKNLQSLEICGGGL 485
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK L+LS +V G++HL + LE L LS T +T + LS L +L L+L
Sbjct: 376 LTHLKNLELSD-TEVGSNGLRHLSGLKNLESLNLSFTLVTDSSLKRLSGLTSLKSLNLDA 434
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNIS 118
+TD L ++ LT L +LDL+G+++S+ GA LK F L L + G+T + NI
Sbjct: 435 RQITDAGLAAITSLTGLTHLDLFGARISDSGANHLKYFKNLQSLEICGGGLTDAGVKNIK 494
Query: 119 SLEC---LNLS-NCTI 130
L C LN+S NC +
Sbjct: 495 DLVCLTWLNISQNCNL 510
>gi|357458869|ref|XP_003599715.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355488763|gb|AES69966.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 585
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 181/381 (47%), Gaps = 50/381 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C +TD+ +K L +++L L +S + +T GI+ L LQ L++L+L G
Sbjct: 228 LTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEG 287
Query: 61 LPVTDLVLRSLQ--------VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV- 111
VT L SL L L L+L +S+RG +L LNL + +
Sbjct: 288 CLVTSACLDSLSGCHEHTIPKLPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIG 347
Query: 112 ----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 167
+ ++ LE LNL +C I EG EN LAG + + +E
Sbjct: 348 DRCLAHMKGLTKLESLNLDSCKIGD--EGLEN--------LAG------HKQLICLE--- 388
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LS +V N L L+ + +LE ++LS +++ D + + C ++L++LNL + +
Sbjct: 389 LSDTEVGNHGLEH---LSGLSSLEKINLSFTVVSDSGLRKL-CGLSSLKSLNLDAYQITD 444
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
AG+ L L L L L G +I D +Y+ +L+ ++I + G + G +
Sbjct: 445 AGLATLTS-LTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICS----GGLTDAGVKN-- 497
Query: 288 VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
++ L+ L LNL Q + ++D T+ ++ L+ L+L N +T L L +L
Sbjct: 498 ------IKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLK 551
Query: 347 KLTNLSIRDAVLTNSGLGSFK 367
L +L++ +T + + FK
Sbjct: 552 NLRSLTLESCKVTANDIKKFK 572
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 187/394 (47%), Gaps = 45/394 (11%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
L+L+ C +++D G++ + +S L L + ++A G++ S L NL LDL P
Sbjct: 160 LNLNYCDQISDHGLECISGLSNLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIH 219
Query: 66 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
LQ LTKLE L++ W + +++ L L+ L ++ + G++ L +
Sbjct: 220 GGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQK 279
Query: 120 LECLNLSNC-----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
L LNL C +DS+ +E+ P L + +N L+ ++S
Sbjct: 280 LALLNLEGCLVTSACLDSLSGCHEHTIP----KLPALSNLN------------LNRCNIS 323
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+ RF ++++ L+ L+L + IGD + + + L +LNL + + G+ LA
Sbjct: 324 DRGCERF---SRLEKLKVLNLGFNDIGDRCLAHMKGL-TKLESLNLDSCKIGDEGLENLA 379
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
GH L L LS T++ ++ + ++S + SL+ I++S T + G L L
Sbjct: 380 GH-KQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFT----VVSDSG--------LRKL 426
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ L+ LNL+ Q++DA L L++ L L L A +TDV + L L +L I
Sbjct: 427 CGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEIC 486
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT++G+ + K SL L+L LT+ +
Sbjct: 487 SGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTV 520
>gi|356550632|ref|XP_003543689.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 565
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 173/368 (47%), Gaps = 40/368 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L+L+ C + D MK L ++ L+ L +S +T GI+ L LQ L++L+L G
Sbjct: 216 LTMLESLNLNWCNCLVDVDMKPLSVLTNLKSLEISFNKVTDFGISFLKGLQKLNLLNLEG 275
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VT L SL+ L L L+L +SN G L LNL + +T L
Sbjct: 276 CQVTTACLDSLEELPALSNLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDITDACLAHLK 335
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ L+ LNL +C I+ EG + LAG +N E LS + +
Sbjct: 336 GLTKLKSLNLDSCRIED--EG--------LVHLAGHQQLNCLE---------LSDTGIGS 376
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ L L+ + LE ++LS + + D + + C ++L++LNL + + G+ L
Sbjct: 377 NGLHH---LSGLSNLEKINLSFTFVNDSGLSKL-CGLSSLKSLNLDARQVTDTGLASLTS 432
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L L G +I D+ +Y+ +L+ ++I ++ + E + SL Q
Sbjct: 433 -LTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSSLKSLNLSQ 491
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
N N ++D TL +S +LI L++ N+ +T+ L L +L L +LS+
Sbjct: 492 NCN-----------LTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTLKNLRSLSLES 540
Query: 356 AVLTNSGL 363
+T +G+
Sbjct: 541 CKVTANGI 548
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 194/408 (47%), Gaps = 54/408 (13%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
L+L+ C +++D G++ + +S L L + ++A G+ S L NL LDL P
Sbjct: 148 LNLNHCHQISDHGLECISGLSNLASLSFRRNYAISAQGLNTFSGLINLVKLDLERCPGIH 207
Query: 66 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
L +Q LT LE L+L W + + + L + L L +++ G++ L +
Sbjct: 208 GSLVHIQGLTMLESLNLNWCNCLVDVDMKPLSVLTNLKSLEISFNKVTDFGISFLKGLQK 267
Query: 120 LECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINER-EAFLYIETSL---LSFLDVS 174
L LNL C + + L+ E L+ ++L+ N+ E F +E L F D++
Sbjct: 268 LNLLNLEGCQVTTACLDSLEELPALSNLNLSRCNLSNDGCEKFSRLENLKVLNLGFNDIT 327
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
++ L+ LT++K+L +L S I D+ + +A L L LS+T S G+ L+
Sbjct: 328 DACLAHLKGLTKLKSL---NLDSCRIEDEGLVHLA-GHQQLNCLELSDTGIGSNGLHHLS 383
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G L NLE ++LS T ++D +S + + SLK +++ +QV TD L +L
Sbjct: 384 G-LSNLEKINLSFTFVNDSGLSKLCGLSSLKSLNLD-------ARQV---TDT--GLASL 430
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL------------------------- 329
+L L L+L +++D L FK L L +
Sbjct: 431 TSLTGLTELDLFGARITDFGTNYLKCFKNLRLLEICGGELTDDGVKNIKELSSLKSLNLS 490
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+N +LTD +L +S L+ L +L++ ++ +TN+GL K ++L+ L L
Sbjct: 491 QNCNLTDTTLELISGLTDLISLNVSNSGITNAGLQHLKTLKNLRSLSL 538
>gi|356519276|ref|XP_003528299.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 1 [Glycine max]
Length = 577
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 184/373 (49%), Gaps = 42/373 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L+L C +TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G
Sbjct: 228 LTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEG 287
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VT L SL L L L+L +S+ G + L LNL + +T L
Sbjct: 288 CLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLK 347
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ LE LNL +C I G+E ++LAG +N E LS +V +
Sbjct: 348 GLTKLESLNLDSCKI-----GDE-----GLVNLAGLEQLNCLE---------LSDTEVGS 388
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ L L+ + +L+ ++LS +MI D S+ ++ ++L++LNL + + AG+ L
Sbjct: 389 NGLHH---LSGLSSLQKINLSFTMISDSSLRKLS-GLSSLKSLNLDAYQITDAGLANLT- 443
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L L G +I D+ +Y+ +L+ ++I G + G + ++
Sbjct: 444 SLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICG----GVLTDAGVKN--------IK 491
Query: 296 NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ L LNL Q + ++D TL +S L+ L++ N+ +T+ L L +L L +L++
Sbjct: 492 ELSSLVCLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLE 551
Query: 355 DAVLTNSGLGSFK 367
+T + + K
Sbjct: 552 SCKVTANDIKKLK 564
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 61/380 (16%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
L+L+ C +++D G++ + +S L L + ++A G++ S L NL LDL P
Sbjct: 160 LNLNYCDQISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIH 219
Query: 66 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 124
L L+ LTKLE L+L W + +++ M P L ++SL+ L
Sbjct: 220 GGLVHLRGLTKLESLNLKWCNCITD-----YDMKP--------------LSELASLKSLE 260
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFIN--EREAFLYIETSLLSFLDVSNSSLSRFC 182
+S+ +K++ G +F+ ++ A L +E L++ + +
Sbjct: 261 ISS----------------SKVTDFGISFLKGLQKLALLNLEGCLVTAACLDS------- 297
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L ++ AL +L+L+ + D+ + ++ + NL+ LNL + A + L G L LE
Sbjct: 298 -LAELPALSNLNLNRCNLSDNGCKKISRL-ENLKVLNLGFNVITDACLVHLKG-LTKLES 354
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L+L +I D + ++ + L +++S+T +VG+ L L L+ L++
Sbjct: 355 LNLDSCKIGDEGLVNLAGLEQLNCLELSDT-------EVGSN-----GLHHLSGLSSLQK 402
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+NL T +SD++L LS L L+L +TD L L+SL+ LT+L + A +T+ G
Sbjct: 403 INLSFTMISDSSLRKLSGLSSLKSLNLDAYQITDAGLANLTSLTGLTDLDLFGARITDFG 462
Query: 363 LGSFKPPRSLKLLDLHGGWL 382
K ++L+ L++ GG L
Sbjct: 463 TNYLKKFKNLRSLEICGGVL 482
>gi|46447560|ref|YP_008925.1| hypothetical protein pc1926 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401201|emb|CAF24650.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 761
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 216/422 (51%), Gaps = 55/422 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LSRC K+TDAG++HL +++L+ L LS LT G+A L+ L L LDL
Sbjct: 343 LTALQYLNLSRCNKLTDAGLEHLALLTSLQHLNLSSCKKLTDAGLAHLTPLMALQHLDLS 402
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L+YL+L ++N G L L +LNL+ G+
Sbjct: 403 ICNKLTDRGLTHLNPLTALQYLNLSQCDNITNAGLEHLIPLTALQYLNLSQCEKLTDAGL 462
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L +++L+ L+LS C K++ AG + Y++ S +
Sbjct: 463 EHLTPLTALQQLDLSWC---------------YKLTDAGFAHLTPLTGLQYLDLSHCN-- 505
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-RFSSAG 229
++++ L+ LT + AL++LDLS+ + + DD + + + A L++LNLS+ + + AG
Sbjct: 506 KLTDAGLAH---LTPLTALQYLDLSNCIKLTDDGLAHLTPLMA-LQHLNLSSCYKLTDAG 561
Query: 230 VGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISN---------------TD 273
L+ L L+ L LS Q + D +++++ + +L+ +D+ TD
Sbjct: 562 FAHLSP-LTALQRLDLSYCQNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTD 620
Query: 274 IKGF-IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-R 330
++ ++ G TD L+ LT L L HL+ + E +++DA L L +L +L+L R
Sbjct: 621 LQYLNLRGCGYLTDAGLAHLTTLSGLQHLDLSSCE--KLTDAGLVHLKLLTDLQYLNLSR 678
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+LTD L L+ L+ L +L +R + LT++GL P L+ LDL W LT+ ++
Sbjct: 679 CENLTDEGLALLTPLTALQHLKLRYCINLTDAGLAHLTPLTGLQRLDLSQCWNLTDAGLI 738
Query: 390 QF 391
Sbjct: 739 HL 740
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 200/418 (47%), Gaps = 53/418 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ L+LSRC +TDAG+ HL ++ L+ L LS T G+A L L L LDL
Sbjct: 243 LTALQHLNLSRCKNLTDAGLAHLTPLTGLQYLDLSHCNKFTDAGLAYLEILTALQHLDLR 302
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
G +TD L L L L+YL L W +++ G LK L +LNL+
Sbjct: 303 GCDKITDAGLSHLTPLVALQYLSLSQCWN--LTDAGLIHLKPLTALQYLNLSRCNKLTDA 360
Query: 110 GVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLA-----------KISLAGTTFINE 156
G+ L ++SL+ LNLS+C D+ G + PL K++ G T +N
Sbjct: 361 GLEHLALLTSLQHLNLSSCKKLTDA---GLAHLTPLMALQHLDLSICNKLTDRGLTHLNP 417
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANL 215
A Y+ S +++N+ L LT AL++L+LS + D +E + + A L
Sbjct: 418 LTALQYLNLSQCD--NITNAGLEHLIPLT---ALQYLNLSQCEKLTDAGLEHLTPLTA-L 471
Query: 216 RNLNLS-NTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTD 273
+ L+LS + + AG L L L+ L LS ++ D +++++ + +L+++D+SN
Sbjct: 472 QQLDLSWCYKLTDAGFAHLTP-LTGLQYLDLSHCNKLTDAGLAHLTPLTALQYLDLSNC- 529
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA 332
+ D + LT L L H LNL +++DA LS L L L
Sbjct: 530 -------IKLTDDGLAHLTPLMALQH---LNLSSCYKLTDAGFAHLSPLTALQRLDLSYC 579
Query: 333 -SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+LTD L L+ L+ L L +R LT++GL K L+ L+L G LT+ +
Sbjct: 580 QNLTDAELAHLTPLTALQRLDLRYCENLTDAGLVHLKLLTDLQYLNLRGCGYLTDAGL 637
>gi|168698161|ref|ZP_02730438.1| hypothetical protein GobsU_01477 [Gemmata obscuriglobus UQM 2246]
Length = 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 161/351 (45%), Gaps = 42/351 (11%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
KVTD G+K L L L LS T LT G+ L+ + L+ L+L VTD ++ L
Sbjct: 82 ATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLELNYTDVTDAGVKEL 141
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWT--GVTKLPNISSLECLNL 125
L L L L G++V++ G L LS L L A T GV +L + +L L L
Sbjct: 142 AGLKALTTLGLGGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKALTTLEL 201
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 185
L K++ AG + E + T L + V+++ + L
Sbjct: 202 G----------------LTKVTDAG---VKELAGLKALTTLDLHYTGVTDAGVKE---LA 239
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+KAL LDL ++ + D V+ +A + A L LNL + + AGV LAG L L L+L
Sbjct: 240 GLKALSVLDLGNTGVTDAGVKELAGLKA-LTTLNLGGAKVTDAGVKELAG-LKALSTLNL 297
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTA---------- 293
GT++ D + ++ +L +D+S T + G + G +L L+
Sbjct: 298 GGTKVTDTGLKELAGFKALTTLDLSFTTLTDAGVKELAGLTALTLLDLSGTTLTDAGVKE 357
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
L L +L L L +T V+DA L L+ K L L L N +TD + +L++
Sbjct: 358 LAPLTNLTMLYLGETGVTDAGLKELAGLKNLTALFLFNTKVTDAGVKELTA 408
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 40/340 (11%)
Query: 43 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 102
G+ L+ L+ L+ L+LG VTD+ ++ L L L+L + +++ G L F L+
Sbjct: 65 GVKELAGLKALTTLNLGATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAGFKALT 124
Query: 103 FLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
L L +T GV +L + +L L L + G + A L ++S+ G
Sbjct: 125 TLELNYTDVTDAGVKELAGLKALTTLGLGGTKVTD--AGVKELASLKELSVLG------- 175
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
L + V+++ + L +KAL L+L + + D V+ +A + A L
Sbjct: 176 ---------LFAAKAVTDAGVKE---LAGLKALTTLELGLTKVTDAGVKELAGLKA-LTT 222
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L+L T + AGV LAG L L +L L T + D + ++ + +L +++ +
Sbjct: 223 LDLHYTGVTDAGVKELAG-LKALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKV--- 278
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
TD + L L L LNL T+V+D L L+ FK L L L +LTD
Sbjct: 279 -------TDA--GVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFTTLTDA 329
Query: 338 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ +L+ L+ LT L + LT++G+ P +L +L L
Sbjct: 330 GVKELAGLTALTLLDLSGTTLTDAGVKELAPLTNLTMLYL 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 30/236 (12%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KVTDAG+K L + L L L TG+T G+ L+ L+ LSVLDLG VTD ++ L
Sbjct: 205 KVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGVTDAGVKELAG 264
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
L L L+L G++V++ G L LS LNL T VT +L +L L+LS
Sbjct: 265 LKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLSFT 324
Query: 129 TI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
T+ D+ ++ L + L+GTT +++ + LT
Sbjct: 325 TLTDAGVKELAGLTALTLLDLSGTTL--------------------TDAGVKELAPLTN- 363
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L L L + + D ++ +A + NL L L NT+ + AGV L LP +I+
Sbjct: 364 --LTMLYLGETGVTDAGLKELAGL-KNLTALFLFNTKVTDAGVKELTAALPKCKIM 416
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 44/325 (13%)
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
P++D ++ L L L L+L ++V++ G L F L+ LNL++T GV +L
Sbjct: 60 PLSDAGVKELAGLKALTTLNLGATKVTDVGVKELAGFKALTTLNLSFTTLTDVGVKELAG 119
Query: 117 ISSLECL--NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+L L N ++ T + E KA L + L GT V+
Sbjct: 120 FKALTTLELNYTDVTDAGVKELAGLKA-LTTLGLGGT--------------------KVT 158
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
++ + L ++ L ++ + D V+ +A + A L L L T+ + AGV LA
Sbjct: 159 DAGVKELASLKELSVLGLF--AAKAVTDAGVKELAGLKA-LTTLELGLTKVTDAGVKELA 215
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G L L L L T + D + ++ + +L +D+ NT + TD + L
Sbjct: 216 G-LKALTTLDLHYTGVTDAGVKELAGLKALSVLDLGNTGV----------TDA--GVKEL 262
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L L LNL +V+DA + L+ K L L+L +TD L +L+ LT L +
Sbjct: 263 AGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTKVTDTGLKELAGFKALTTLDLS 322
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHG 379
LT++G+ +L LLDL G
Sbjct: 323 FTTLTDAGVKELAGLTALTLLDLSG 347
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 30/259 (11%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG+K L + L L L T +T G+ L+ L+ L+ LDL VTD ++ L L
Sbjct: 182 VTDAGVKELAGLKALTTLELGLTKVTDAGVKELAGLKALTTLDLHYTGVTDAGVKELAGL 241
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLECLNLSNCT 129
L LDL + V++ G L L+ LNL GV +L + +L LNL
Sbjct: 242 KALSVLDLGNTGVTDAGVKELAGLKALTTLNLGGAKVTDAGVKELAGLKALSTLNLGGTK 301
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
+ T + E F + T LSF ++++ + L + A
Sbjct: 302 VTD-------------------TGLKELAGFKALTTLDLSFTTLTDAGVKE---LAGLTA 339
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L LDLS + + D V+ +A + NL L L T + AG+ LAG L NL L L T+
Sbjct: 340 LTLLDLSGTTLTDAGVKELAPL-TNLTMLYLGETGVTDAGLKELAG-LKNLTALFLFNTK 397
Query: 250 IDDYAISYM-SMMPSLKFI 267
+ D + + + +P K +
Sbjct: 398 VTDAGVKELTAALPKCKIM 416
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%)
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L LNL T ++D + L+ FK L L L +TD + +L+ L LT L +
Sbjct: 93 LAGFKALTTLNLSFTTLTDVGVKELAGFKALTTLELNYTDVTDAGVKELAGLKALTTLGL 152
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 396
+T++G+ + L +L L +T+ + + +
Sbjct: 153 GGTKVTDAGVKELASLKELSVLGLFAAKAVTDAGVKELAGLKA 195
>gi|226534362|gb|ACO71457.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LTKLEYLD+WGS V+N GA + F LS+LNL+WT VT+ PNI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSYLNLSWTSVTQTPNIPHLECLHMNKCDIVSI 61
Query: 134 LEGNENK-APLAKISLAGTTFINEREAF 160
L+ + + A L K+ L+G TF E E+F
Sbjct: 62 LKTHSSALASLKKLVLSGATFSAETESF 89
>gi|442319589|ref|YP_007359610.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
gi|441487231|gb|AGC43926.1| hypothetical protein MYSTI_02610 [Myxococcus stipitatus DSM 14675]
Length = 600
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 176/399 (44%), Gaps = 68/399 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
+VTDAG+ HL + L + L ET ++ G+A L L L + L G V+ LR L
Sbjct: 151 TRVTDAGLPHLSGLRRLSVVRLEETAISDKGLAFLEGLTTLRRVGLAGTSVSAQGLRFLS 210
Query: 73 VLTKLEYLDL-----------W------------GSQVSNRGAAVLKMFPRLSFLNLAWT 109
+LE+LDL W G+QV++ G A L+ P L++L LA T
Sbjct: 211 AQAELEWLDLSDTSTDDRVLAWVSGAHLHTLILSGTQVTDAGLARLRDMPHLTWLGLART 270
Query: 110 GVT-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
G+T + + +LE L+L +++ AG + E ++ +E
Sbjct: 271 GLTDGGLAPIGALRALEALHLGET----------------QVTDAGLLHLAESKS---LE 311
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
+L+ + L LT+++ L HLD + + D ++ + + A LR L LS T
Sbjct: 312 ALVLTKTRLHGPGLQHLAGLTRLELL-HLD--DTRLDDAAMRHLRGLVA-LRELELSRTL 367
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
+ AG+ L L LE L +SG + A++ + L +D+S+T VG E
Sbjct: 368 ITGAGLASLDA-LSALERLGVSGLAVTADALAVLQKTERLTRLDLSHT-------PVGPE 419
Query: 285 TDLVLSLTALQNL-NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
AL ++ + L L+L +T +D L L L L LTD+ L QL
Sbjct: 420 --------ALAHVPSGLRELDLSRTAFNDEWLPSLRRLSRLQSLRAERTLLTDLGLGQLG 471
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L++L L + ++ SGL + L LDL WL
Sbjct: 472 ELTELAALHLSGTLVNGSGLAHLQRLPHLAHLDLGATWL 510
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 159/347 (45%), Gaps = 19/347 (5%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
+VTDAG+ L + L L L+ TGLT G+A + +L+ L L LG VTD L L
Sbjct: 246 TQVTDAGLARLRDMPHLTWLGLARTGLTDGGLAPIGALRALEALHLGETQVTDAGLLHLA 305
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSN 127
LE L L +++ G L RL L+L T + L + +L L LS
Sbjct: 306 ESKSLEALVLTKTRLHGPGLQHLAGLTRLELLHLDDTRLDDAAMRHLRGLVALRELELSR 365
Query: 128 CTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
I L + + L ++ ++G + A L +T L+ LD+S++ +
Sbjct: 366 TLITGAGLASLDALSALERLGVSGLAVTADALAVLQ-KTERLTRLDLSHTPVGPEALAHV 424
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
L LDLS + D+ + + + + L++L T + G+G L G L L L LS
Sbjct: 425 PSGLRELDLSRTAFNDEWLPSLRRL-SRLQSLRAERTLLTDLGLGQL-GELTELAALHLS 482
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--LNHL 300
GT ++ ++++ +P L +D+ T ++ +Q + T L L+ L + L HL
Sbjct: 483 GTLVNGSGLAHLQRLPHLAHLDLGATWLEAHYTPALQGLTRLTWLSLARGRLGDAALGHL 542
Query: 301 ----ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
L L +T V+DA L L + L L LR ++TD + LS
Sbjct: 543 PPGLHTLYLTRTGVTDAGLDSLRSLPHLRQLDLRGTAVTDAARDALS 589
>gi|46446667|ref|YP_008032.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400308|emb|CAF23757.1| hypothetical protein pc1033 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 662
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 193/414 (46%), Gaps = 64/414 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+T L+ L L +C ++T+AG+ HL ++ L+ L LSE LT G+A L+ L L L L
Sbjct: 273 LTALQHLGLGQCWRLTNAGLAHLTPLTALQYLNLSEYKNLTDAGLAHLTPLTALQHLGLS 332
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
G +TD L L L L++LDL G Q NL G+ L ++
Sbjct: 333 GCQNLTDAGLAHLTPLMGLQHLDLSGCQ------------------NLTDAGLAHLTPLT 374
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L+ LNLS C K++ AG + +++ S N +
Sbjct: 375 GLQHLNLSRCN---------------KLTDAGLAHLTPLTGLQHLDLS-----GCQNLTD 414
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTR-FSSAGVGILAG 235
+ LT + L+HLDLS D+ + G L++LNL N R F+ G+ L
Sbjct: 415 AGLAHLTPLTGLQHLDLSGCQNLTDAGLAHLTPLTG--LQHLNLCNCRKFTDNGLAHLTP 472
Query: 236 HLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIK-------GFIQQVGA 283
L L+ L+LS ++ D +++++ + +L+ +D+S+ TD+ +Q +G
Sbjct: 473 -LSVLQHLNLSRCNKLTDVGLAHLTPLTALQHLDLSSCYNLTDVGLAHLTPLTSLQHLGL 531
Query: 284 ETDLVLS---LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLR-NASLTDVS 338
+ L+ L L+ L L+ LNL + ++DA L L+ L +L L LTD
Sbjct: 532 ISCDKLTDAGLVHLKLLTGLQHLNLSNCKNLTDAGLAHLTPLTALQYLYLNWCRKLTDAG 591
Query: 339 LHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
L L+SL+ L +L +R LT++GL P L+ LDL W LT+ + +F
Sbjct: 592 LAHLTSLTALQHLDLRYCQNLTDAGLAHLTPLTGLRHLDLSQCWRLTKAGLARF 645
>gi|226534342|gb|ACO71447.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534344|gb|ACO71448.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534348|gb|ACO71450.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534352|gb|ACO71452.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534354|gb|ACO71453.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534356|gb|ACO71454.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534358|gb|ACO71455.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534360|gb|ACO71456.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534364|gb|ACO71458.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534366|gb|ACO71459.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ PNI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTPNIPHLECLHMNKCDIVSI 61
Query: 134 LEGNENK-APLAKISLAGTTFINEREAF 160
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSALASLKKLVLSGATFSAETESF 89
>gi|168701673|ref|ZP_02733950.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 367
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 154/350 (44%), Gaps = 56/350 (16%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VTD G+K L + L L L T +T G+ L+ L+ L+ LDL VTD ++ L
Sbjct: 60 RVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELAA 119
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
L L L L G V++ G L +L+ L+L+ T
Sbjct: 120 LNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHT------------------------ 155
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
K++ AG + E A + T L+ +V+++ L L +K L L
Sbjct: 156 -----------KVTDAG---LKELAALKGLTTIRLNNTEVTDAGLKE---LAALKKLADL 198
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
DLS + + D ++ +A + L L L T+ + AG+ LAG NL L L+GT + D
Sbjct: 199 DLSQTKVTDAGLKELAAL-KGLTCLGLLGTKVTDAGLKELAG--LNLTDLHLAGTPVTDA 255
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+ ++ + +L + + T + G + L L L L L L T+V+DA
Sbjct: 256 GLKELAALKNLTHLYLFGTKVTG------------VGLKELSGLKGLTTLYLNNTKVTDA 303
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+ LS K L L L +TD + L+ L LTNL + +T++G+
Sbjct: 304 GVKELSGLKGLTTLDLSYTEMTDAGVKALAGLKGLTNLELYGTKVTDAGV 353
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 150/330 (45%), Gaps = 56/330 (16%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG+K L + L L L+ T +T G+ L++L NL+ L L G VTD L+ L L
Sbjct: 85 VTDAGVKELAGLKGLTTLDLNSTSVTDAGMKELAALNNLTTLRLSGKGVTDAGLKELAAL 144
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
KL LDL ++V++ G+ +L + L + L+N
Sbjct: 145 KKLANLDLSHTKVTD-------------------AGLKELAALKGLTTIRLNNT------ 179
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
+++ AG + E A + LS V+++ L L +K L L
Sbjct: 180 ----------EVTDAG---LKELAALKKLADLDLSQTKVTDAGLKE---LAALKGLTCLG 223
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
L + + D ++ +A G NL +L+L+ T + AG+ LA L NL L L GT++
Sbjct: 224 LLGTKVTDAGLKELA--GLNLTDLHLAGTPVTDAGLKELAA-LKNLTHLYLFGTKVTGVG 280
Query: 255 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 314
+ +S + L + ++NT + TD + L L L L+L T+++DA
Sbjct: 281 LKELSGLKGLTTLYLNNTKV----------TD--AGVKELSGLKGLTTLDLSYTEMTDAG 328
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
+ L+ K L +L L +TD + +L+S
Sbjct: 329 VKALAGLKGLTNLELYGTKVTDAGVKELNS 358
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL+ VTDAGMK L +++ L L LS G+T G+ L++L+ L+ LDL V
Sbjct: 99 LTTLDLN-STSVTDAGMKELAALNNLTTLRLSGKGVTDAGLKELAALKKLANLDLSHTKV 157
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
TD L+ L L L + L ++V++ G L +L+ L+L+ T VT +L +
Sbjct: 158 TDAGLKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALK 217
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVS 174
L CL L + L + LAGT + E A + L V+
Sbjct: 218 GLTCLGLLGTKVTDAGLKELAGLNLTDLHLAGTPVTDAGLKELAALKNLTHLYLFGTKVT 277
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L L+ +K L L L+++ + D V+ ++ + L L+LS T + AGV LA
Sbjct: 278 GVGLKE---LSGLKGLTTLYLNNTKVTDAGVKELSGL-KGLTTLDLSYTEMTDAGVKALA 333
Query: 235 GHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFID 268
G L L L L GT++ D + + S +P K ++
Sbjct: 334 G-LKGLTNLELYGTKVTDAGVKELNSALPKCKILN 367
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 85 SQVSNRGAAVLKMFPRLSFLNL--AW---TGVTKLPNISSLECLNLSNCTIDSILEGNEN 139
++V+++G L L+ LNL W GV +L + L L+L++ ++
Sbjct: 59 TRVTDKGLKELAGLKNLTHLNLFSTWVTDAGVKELAGLKGLTTLDLNSTSVTD------- 111
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
AG + E A + T LS V+++ L L +K L +LDLS +
Sbjct: 112 ---------AG---MKELAALNNLTTLRLSGKGVTDAGLKE---LAALKKLANLDLSHTK 156
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
+ D ++ +A + L + L+NT + AG+ LA L L L LS T++ D + ++
Sbjct: 157 VTDAGLKELAAL-KGLTTIRLNNTEVTDAGLKELAA-LKKLADLDLSQTKVTDAGLKELA 214
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
+ L + + T + TD L L LN L L+L T V+DA L L+
Sbjct: 215 ALKGLTCLGLLGTKV----------TDA--GLKELAGLN-LTDLHLAGTPVTDAGLKELA 261
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
K L HL L +T V L +LS L LT L + + +T++G+ + L LDL
Sbjct: 262 ALKNLTHLYLFGTKVTGVGLKELSGLKGLTTLYLNNTKVTDAGVKELSGLKGLTTLDL 319
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
LS + + D ++ +A + NL +LNL +T + AGV LAG L L L L+ T + D
Sbjct: 56 LSFTRVTDKGLKELAGL-KNLTHLNLFSTWVTDAGVKELAG-LKGLTTLDLNSTSVTDAG 113
Query: 255 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 314
+ ++ + +L + +S KG L L L L L+L T+V+DA
Sbjct: 114 MKELAALNNLTTLRLSG---KGVTDA---------GLKELAALKKLANLDLSHTKVTDAG 161
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
L L+ K L + L N +TD L +L++L KL +L + +T++GL + L
Sbjct: 162 LKELAALKGLTTIRLNNTEVTDAGLKELAALKKLADLDLSQTKVTDAGLKELAALKGLTC 221
Query: 375 LDLHG 379
L L G
Sbjct: 222 LGLLG 226
>gi|242076388|ref|XP_002448130.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
gi|241939313|gb|EES12458.1| hypothetical protein SORBIDRAFT_06g021780 [Sorghum bicolor]
Length = 581
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 192/428 (44%), Gaps = 86/428 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL---- 58
++ L C K+++ G+K L S L L + + +TA+G ++L NL LDL
Sbjct: 161 MQSLACDYCDKISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L L L ++S+ G + L+
Sbjct: 221 KIHGGLIHLKGLKKLEKLNMRYCNCITDSDMKYLSDLTNLRELQLSSCKISDFGVSYLRG 280
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCSVTAACLEVISELASLVLLNLSRCGICD--EGCENLEGLTKLKALNLG 338
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
F + A L L + +LE L+L S IGD+ + + +
Sbjct: 339 FNHITGACLI--------------------HLKDLISLECLNLDSCKIGDEGLFHLKGL- 377
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L++L LS+T S G+ L+G L NL+ ++LS T + D + +S + SLK +++ N
Sbjct: 378 IQLKSLELSDTEVGSNGLRHLSG-LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNR 436
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERL----------------NLEQTQV-----S 311
I +T L SLT L L HL+ NL+ +V +
Sbjct: 437 QI--------TDTGLA-SLTNLTGLTHLDLFGARITDSGMNCFRFFKNLQSLEVCGGLIT 487
Query: 312 DATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
DA + + K L L+L +N +LTD +L +S L+ L +L++ ++ ++NSGL KP
Sbjct: 488 DAGVKNIKDLKALTLLNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLL 547
Query: 371 SLKLLDLH 378
+L+ L L
Sbjct: 548 NLRSLSLE 555
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 42/360 (11%)
Query: 8 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 67
++ C +TD+ MK+L ++ L +L LS ++ G++ L L L L+L G VT
Sbjct: 239 NMRYCNCITDSDMKYLSDLTNLRELQLSSCKISDFGVSYLRGLHKLGHLNLEGCSVTAAC 298
Query: 68 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLEC 122
L + L L L+L + + G L+ +L LNL + +T L ++ SLEC
Sbjct: 299 LEVISELASLVLLNLSRCGICDEGCENLEGLTKLKALNLGFNHITGACLIHLKDLISLEC 358
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
LNL +C I G+E L + + +++ LS +V ++ L
Sbjct: 359 LNLDSCKI-----GDEGLFHL--------------KGLIQLKSLELSDTEVGSNGLRH-- 397
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L+ ++ L+ ++LS +++ D ++ ++ + ++L++LNL N + + G+ L +L L
Sbjct: 398 -LSGLRNLQSINLSFTLVTDIGLKKISGL-SSLKSLNLDNRQITDTGLASLT-NLTGLTH 454
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L L G +I D ++ +L+ +++ G I G + +++L L
Sbjct: 455 LDLFGARITDSGMNCFRFFKNLQSLEVCG----GLITDAGVKN--------IKDLKALTL 502
Query: 303 LNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
LNL Q ++D TL +S L+ L++ N+ +++ LH L L L +LS+ +T S
Sbjct: 503 LNLSQNGNLTDKTLELISGLTALVSLNVSNSRVSNSGLHHLKPLLNLRSLSLESCRVTAS 562
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 50/392 (12%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP-VT 64
+DLS C VTD+G L S+++ L ++ G+ LS NL+ L + VT
Sbjct: 140 VDLS-CSDVTDSGFNLLKDCSSMQSLACDYCDKISEHGLKTLSGFSNLTSLSIKKCAAVT 198
Query: 65 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNIS 118
++ L L LDL + G LK +L LN+ + + + L +++
Sbjct: 199 AEGAKAFANLVNLVNLDLERCPKIHGGLIHLKGLKKLEKLNMRYCNCITDSDMKYLSDLT 258
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L L LS+C KIS G +++ L L++ S+
Sbjct: 259 NLRELQLSSC----------------KISDFGVSYLRGLHK--------LGHLNLEGCSV 294
Query: 179 SRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ C ++++ +L L+LS I D+ E + + L+ LNL + A + I
Sbjct: 295 TAACLEVISELASLVLLNLSRCGICDEGCENLEGL-TKLKALNLGFNHITGACL-IHLKD 352
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L +LE L+L +I D + ++ + LK +++S+T +VG+ L L
Sbjct: 353 LISLECLNLDSCKIGDEGLFHLKGLIQLKSLELSDT-------EVGSN-----GLRHLSG 400
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L +L+ +NL T V+D L +S L L+L N +TD L L++L+ LT+L + A
Sbjct: 401 LRNLQSINLSFTLVTDIGLKKISGLSSLKSLNLDNRQITDTGLASLTNLTGLTHLDLFGA 460
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+T+SG+ F+ ++L+ L++ GG L+T+ +
Sbjct: 461 RITDSGMNCFRFFKNLQSLEVCGG-LITDAGV 491
>gi|149174587|ref|ZP_01853213.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
gi|148846697|gb|EDL61034.1| hypothetical protein PM8797T_09949 [Planctomyces maris DSM 8797]
Length = 540
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 174/379 (45%), Gaps = 41/379 (10%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ + G KH+ + LE L L T +T + + +L+NL L+L ++D L L+ L
Sbjct: 121 IEEGGRKHITGLQNLELLSLRGTTITDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGL 180
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
++L L+L G+Q L TG+ L +++ LE L+L N + +
Sbjct: 181 SELRVLELEGTQ-------------------LDGTGLVYLKHLNHLEELDLDNYNNNFVG 221
Query: 135 --EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
+G P +I AG I + + + DV L +K LE
Sbjct: 222 WNDGESENEPRPQIRDAGLKHIGKLKHLKKLSLFGAEISDVG------LAHLQDLKKLES 275
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L+ + I D V + + NL +L L +R S AG+ LA L L+ L L T I D
Sbjct: 276 LEFARENISDKGVAHLKGL-LNLTSLRLDGSRVSDAGLVHLA-KLQKLQSLDLGNTSISD 333
Query: 253 YAISYMSMMPSLKFIDISNTDI--KGFIQQVGAE---------TDLV-LSLTALQNLNHL 300
+ ++ + SLK +D+S+T + G I + T+L + L++L+NL+ L
Sbjct: 334 TGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLRSTNLSGVGLSSLKNLSML 393
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
+ L++ ++++D L ++ L L L +TD L LS L+ L L +++ +++
Sbjct: 394 QYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHLSGLTNLKKLDLQETSISD 453
Query: 361 SGLGSFKPPRSLKLLDLHG 379
+GL LK+LDL G
Sbjct: 454 AGLVHLSHLAGLKVLDLEG 472
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 55/330 (16%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
+++D G+ HL + LE L + ++ G+A L L NL+ L L G V+D L L
Sbjct: 257 AEISDVGLAHLQDLKKLESLEFARENISDKGVAHLKGLLNLTSLRLDGSRVSDAGLVHLA 316
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
L KL+ LDL + +S+ TG+ L ++SL+ L+LS+ +
Sbjct: 317 KLQKLQSLDLGNTSISD-------------------TGLIHLQELTSLKSLDLSDTAVS- 356
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
++ L+++ + LY+ ++ LS + +S+ L + L++
Sbjct: 357 ----DDGLIHLSRL---------QNLESLYLRSTNLSGVGLSS--------LKNLSMLQY 395
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
LD+ S + D + VA +G+ L +L L T + G+ L+G L NL+ L L T I D
Sbjct: 396 LDMGYSKMNDQGLIAVAELGS-LDSLGLFATPITDQGLVHLSG-LTNLKKLDLQETSISD 453
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
+ ++S + LK +D+ T I TD L LQ LN LE+L L++T VSD
Sbjct: 454 AGLVHLSHLAGLKVLDLEGTRI----------TD--AGLIHLQGLNELEQLELDKTAVSD 501
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
A L L +L L +T+ ++ L
Sbjct: 502 AGLKHLKGLTKLQFLQYEETQITEAGINDL 531
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 188/437 (43%), Gaps = 103/437 (23%)
Query: 1 MTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
+T L+ L+L R +TD+ +K++ ++ L+KL L+ T ++ G+A L L L VL+L
Sbjct: 129 ITGLQNLELLSLRGTTITDSDLKYVGALKNLQKLNLNNTAISDAGLAHLRGLSELRVLEL 188
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDL------------------------------------ 82
G + L L+ L LE LDL
Sbjct: 189 EGTQLDGTGLVYLKHLNHLEELDLDNYNNNFVGWNDGESENEPRPQIRDAGLKHIGKLKH 248
Query: 83 ------WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-CLNLSNCTIDSILE 135
+G+++S+ G A L+ +L L A ++ ++ L+ LNL++ +D
Sbjct: 249 LKKLSLFGAEISDVGLAHLQDLKKLESLEFARENISD-KGVAHLKGLLNLTSLRLDG--- 304
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHL 193
+++S AG + + + L LD+ N+S+S L ++ +L+ L
Sbjct: 305 --------SRVSDAGLVHLAKLQK--------LQSLDLGNTSISDTGLIHLQELTSLKSL 348
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV----------------------G 231
DLS + + DD + ++ + NL +L L +T S G+ G
Sbjct: 349 DLSDTAVSDDGLIHLSRL-QNLESLYLRSTNLSGVGLSSLKNLSMLQYLDMGYSKMNDQG 407
Query: 232 ILA-GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
++A L +L+ L L T I D + ++S + +LK +D+ T I
Sbjct: 408 LIAVAELGSLDSLGLFATPITDQGLVHLSGLTNLKKLDLQETSISDA------------G 455
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L +L L+ L+LE T+++DA L L EL L L +++D L L L+KL
Sbjct: 456 LVHLSHLAGLKVLDLEGTRITDAGLIHLQGLNELEQLELDKTAVSDAGLKHLKGLTKLQF 515
Query: 351 LSIRDAVLTNSGLGSFK 367
L + +T +G+ +
Sbjct: 516 LQYEETQITEAGINDLR 532
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 35/245 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDL ++D G+ HL +++L+ L LS+T ++ DG+ LS LQNL L L +
Sbjct: 321 LQSLDLGNT-SISDTGLIHLQELTSLKSLDLSDTAVSDDGLIHLSRLQNLESLYLRSTNL 379
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
+ + L SL+ L+ L+YLD+ S+++++G + L L L T G+ L ++
Sbjct: 380 SGVGLSSLKNLSMLQYLDMGYSKMNDQGLIAVAELGSLDSLGLFATPITDQGLVHLSGLT 439
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+L+ L+L +I + A L +S LAG L LD+ +
Sbjct: 440 NLKKLDLQETSI--------SDAGLVHLSHLAG-----------------LKVLDLEGTR 474
Query: 178 LSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
++ L + LE L+L + + D ++ + + L+ L T+ + AG+ L
Sbjct: 475 ITDAGLIHLQGLNELEQLELDKTAVSDAGLKHLKGL-TKLQFLQYEETQITEAGINDLRQ 533
Query: 236 HLPNL 240
LP+L
Sbjct: 534 SLPDL 538
>gi|255088361|ref|XP_002506103.1| predicted protein [Micromonas sp. RCC299]
gi|226521374|gb|ACO67361.1| predicted protein [Micromonas sp. RCC299]
Length = 610
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 182/400 (45%), Gaps = 44/400 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
L+ LD+S C V D + + S+S L +L + G+T G+ +S L ++L
Sbjct: 183 LESLDVSECPGVNDNALAAVASMSRLRRLACAGCDGITGAGLRYVSGATKLRCVNLERCN 242
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L L LT+LE LD W + V + L+ +L LNLA T GV + +
Sbjct: 243 GLTNGLVYLSGLTELERLDAGWCNHVDSNDVTSLRSLKKLKHLNLARTKVDDQGVATIGS 302
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+S+LE LNL+ C I +G A L G T + E L + V +
Sbjct: 303 LSALETLNLAGC---RITDG-------ACFLLGGLTALKELS---------LEWCRVGDG 343
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ R L + LE L+L S + D+ V+ +A + LR ++L + + LA
Sbjct: 344 GVRR---LASLAKLEVLNLGYSSVTDEGVQHLAPL-VKLREIDLDSCQVGDDACKALA-E 398
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
PNLE ++LS T + + + +S + L+ +++S +++ D V+ L +N
Sbjct: 399 WPNLEDVNLSDTAVGNLGLKRISKLTRLRRVNLSYSNVS---------DDGVMYL---EN 446
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L+L+ V+D L L+ K++ L L A +TD L + +L L +
Sbjct: 447 AASIRSLSLDTRMVTDEGLGYLAKLKDIEELDLFGARITDEGAKHLRHMPRLKTLELCGG 506
Query: 357 VLTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAILQFCKMH 395
+T++G+ R L LL+L + +++ A+ ++H
Sbjct: 507 GITDAGVKHIGDACRELTLLNLGQNFRISDAAVPFLLQLH 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 43/361 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ LD C V + L S+ L+ L L+ T + G+A + SL L L+L G
Sbjct: 254 LTELERLDAGWCNHVDSNDVTSLRSLKKLKHLNLARTKVDDQGVATIGSLSALETLNLAG 313
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+TD L LT L+ L L +V + G L +L LNL ++ GV L
Sbjct: 314 CRITDGACFLLGGLTALKELSLEWCRVGDGGVRRLASLAKLEVLNLGYSSVTDEGVQHLA 373
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L ++L +C + G++ LA+ + +E LS V N
Sbjct: 374 PLVKLREIDLDSCQV-----GDDACKALAE--------------WPNLEDVNLSDTAVGN 414
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L R LT+++ ++LS S + DD V M A++R+L+L + G+G LA
Sbjct: 415 LGLKRISKLTRLR---RVNLSYSNVSDDGV-MYLENAASIRSLSLDTRMVTDEGLGYLA- 469
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTAL 294
L ++E L L G +I D ++ MP LK +++ I ++ +G D LT
Sbjct: 470 KLKDIEELDLFGARITDEGAKHLRHMPRLKTLELCGGGITDAGVKHIG---DACRELTL- 525
Query: 295 QNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LNL Q ++SDA + L +L L+L+ + +++ + QLS LS LT L++
Sbjct: 526 --------LNLGQNFRISDAAVPFLLQLHKLGSLNLQYSRISNEGVTQLSQLSNLTTLAL 577
Query: 354 R 354
+
Sbjct: 578 K 578
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 70/404 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
L ++LS C +T G L + LE L +SE G+ + +A ++S+ L L G
Sbjct: 158 LSSINLSGCAALTPDGFNALAACVELESLDVSECPGVNDNALAAVASMSRLRRLACAGCD 217
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG------VTKLP 115
+T LR + TKL ++L G L L L+ W VT L
Sbjct: 218 GITGAGLRYVSGATKLRCVNLERCNGLTNGLVYLSGLTELERLDAGWCNHVDSNDVTSLR 277
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ L+ LNL+ +D ++ A + +S
Sbjct: 278 SLKKLKHLNLARTKVD-----DQGVATIGSLS---------------------------- 304
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
ALE L+L+ I D + ++ + A L+ L+L R GV LA
Sbjct: 305 -------------ALETLNLAGCRITDGACFLLGGLTA-LKELSLEWCRVGDGGVRRLA- 349
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L LE+L+L + + D + +++ + L+ ID+ + QVG + + AL
Sbjct: 350 SLAKLEVLNLGYSSVTDEGVQHLAPLVKLREIDLDSC-------QVGDD-----ACKALA 397
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+LE +NL T V + L +S L ++L ++++D + L + + + +LS+
Sbjct: 398 EWPNLEDVNLSDTAVGNLGLKRISKLTRLRRVNLSYSNVSDDGVMYLENAASIRSLSLDT 457
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
++T+ GLG + ++ LDL G + E A + + PR++
Sbjct: 458 RMVTDEGLGYLAKLKDIEELDLFGARITDEGA--KHLRHMPRLK 499
>gi|356548547|ref|XP_003542662.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 578
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 181/380 (47%), Gaps = 64/380 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C VTD+ +K + + L++L +S + +T GI L L+ L+ L++ G +
Sbjct: 232 LEYLNIGCCKCVTDSDIKSISELINLKELQISNSSITDIGITYLRGLEKLTTLNVEGCNI 291
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + LT L L+L +S+ G + L L+LA+ +T L +++
Sbjct: 292 TAACLEFIHALTSLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKDLT 351
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C I G+ A L ++L +++ +LS D+ NS L
Sbjct: 352 NLEYLNLDSCRI-----GDGGLANLTGLTL--------------LKSLVLSDTDIGNSGL 392
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+++ +K LE L++S + + D+ ++ ++ + L++LNL + + AG+ L L
Sbjct: 393 R---YISGLKKLEDLNVSFTTVTDNGLKRLSGL-TQLKSLNLDARQITDAGLANLT-SLS 447
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D +++ +L+ ++I G + G + ++ +
Sbjct: 448 GLITLDLFGARISDNGTTFLRSFKNLQSLEICG----GGLTDAGVKN--------IREIV 495
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L +LNL Q N +LTD +L +S ++ L +L++ ++ +
Sbjct: 496 SLTQLNLSQ-----------------------NCNLTDKTLELISGMTALRSLNVSNSRI 532
Query: 359 TNSGLGSFKPPRSLKLLDLH 378
TN GL KP ++L+ L L
Sbjct: 533 TNEGLRHLKPLKNLRTLTLE 552
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 182/392 (46%), Gaps = 38/392 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDL-GGLPVTDLVLRSL 71
+VTD G++ L S+L+ L LS ++ G+ +S L NL+ L + V +R+
Sbjct: 143 QVTDDGLRLLKDCSSLQALTLSYCDQFSEYGLKHISGLSNLTSLSIRKSSSVKPDGMRAF 202
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL-ECLNLSNCTI 130
L LE LDL + G LK +L +LN+ +I S+ E +NL I
Sbjct: 203 SNLFNLEKLDLERCSEIHGGFVHLKGLKKLEYLNIGCCKCVTDSDIKSISELINLKELQI 262
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMK 188
+ + I+ G T++ E L+ L+V +++ C F+ +
Sbjct: 263 SN-----------SSITDIGITYLRGLEK--------LTTLNVEGCNITAACLEFIHALT 303
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
+L L+L+ + DD E ++ + NL+ L+L+ R + A + + L NLE L+L
Sbjct: 304 SLACLNLNRCGLSDDGFEKISGL-KNLKRLSLAFNRITDACL-VHLKDLTNLEYLNLDSC 361
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTA--------LQN 296
+I D ++ ++ + LK + +S+TDI +I + DL +S T L
Sbjct: 362 RIGDGGLANLTGLTLLKSLVLSDTDIGNSGLRYISGLKKLEDLNVSFTTVTDNGLKRLSG 421
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L+ LNL+ Q++DA L L++ LI L L A ++D L S L +L I
Sbjct: 422 LTQLKSLNLDARQITDAGLANLTSLSGLITLDLFGARISDNGTTFLRSFKNLQSLEICGG 481
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT++G+ + + SL L+L LT+ +
Sbjct: 482 GLTDAGVKNIREIVSLTQLNLSQNCNLTDKTL 513
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 45/292 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L++ C +T A ++ + ++++L L L+ GL+ DG +S L+NL L L +
Sbjct: 281 LTTLNVEGC-NITAACLEFIHALTSLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRI 339
Query: 64 TDLVLRSLQVLTKLEYLD------------------------LWGSQVSNRGAAVLKMFP 99
TD L L+ LT LEYL+ L + + N G +
Sbjct: 340 TDACLVHLKDLTNLEYLNLDSCRIGDGGLANLTGLTLLKSLVLSDTDIGNSGLRYISGLK 399
Query: 100 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAPL-------AKI 146
+L LN+++T VT +L ++ L+ LNL I D+ L + + L A+I
Sbjct: 400 KLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLITLDLFGARI 459
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
S GTTF+ + +E D ++ LTQ+ ++ +L+ D ++E
Sbjct: 460 SDNGTTFLRSFKNLQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLT-----DKTLE 514
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
+++ + A LR+LN+SN+R ++ G+ L L NL L+L ++ I +
Sbjct: 515 LISGMTA-LRSLNVSNSRITNEGLRHLK-PLKNLRTLTLESCKVTASGIKKL 564
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK L LS + ++G++++ + LE L +S T +T +G+ LS L L L+L
Sbjct: 374 LTLLKSLVLSD-TDIGNSGLRYISGLKKLEDLNVSFTTVTDNGLKRLSGLTQLKSLNLDA 432
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
+TD L +L L+ L LDL+G+++S+ G L+ F L L + G+T +
Sbjct: 433 RQITDAGLANLTSLSGLITLDLFGARISDNGTTFLRSFKNLQSLEICGGGLTDAGVKNIR 492
Query: 116 NISSLECLNLS-NCTI-DSILEGNENKAPLAKISLAGTTFINE 156
I SL LNLS NC + D LE L ++++ + NE
Sbjct: 493 EIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRITNE 535
>gi|255583092|ref|XP_002532313.1| protein binding protein, putative [Ricinus communis]
gi|223527982|gb|EEF30065.1| protein binding protein, putative [Ricinus communis]
Length = 597
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 170/364 (46%), Gaps = 43/364 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C + D MK L I+ L++L +S + +T G++ L LQ L +L+L G V
Sbjct: 231 LESLNIRCCKCIEDMDMKALSDITNLKELQISNSNVTDLGVSYLKGLQKLIMLNLEGCNV 290
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L S+ L L YL+L +S+ G + L L+L + +T L +
Sbjct: 291 TTACLDSISALVALTYLNLNRCNLSDDGCSKFSGLKNLKVLSLGFNNITDACLVHLKGLM 350
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C I N PL + L+ T +V ++ L
Sbjct: 351 NLENLNLDSCNIGDEGLANLTGLPLKSLELSDT--------------------EVGSNGL 390
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
LT LE+L+LS +++ D + ++ +LR+LNL + + AG+ L L
Sbjct: 391 RHLSGLT---LLENLNLSFTLVTDSGLRRLS-GLLSLRSLNLDARQITDAGLAALT-RLT 445
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D Y+ +L+ ++I G + G + +++L
Sbjct: 446 GLIHLDLFGARISDSGTKYLQYFKNLQSLEICG----GGLTDDGVKN--------IKDLV 493
Query: 299 HLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
HL LNL Q + ++D TL +S EL+ L++ N+ +T+ LH L L L +LS+
Sbjct: 494 HLTVLNLSQNSNLTDKTLELISGLTELVSLNVSNSLITNEGLHYLKPLKNLRSLSLESCK 553
Query: 358 LTNS 361
+T S
Sbjct: 554 VTAS 557
>gi|46447096|ref|YP_008461.1| hypothetical protein pc1462 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400737|emb|CAF24186.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 870
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 194/394 (49%), Gaps = 43/394 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T LK LDLS C +TD G+ HL S+ L+ L L LT G+A L+SL L LDLG
Sbjct: 483 LTALKHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLDLG 542
Query: 60 -----GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT---- 109
+TD L L LT L++LDL W +++ G A L L L+L+W
Sbjct: 543 LDFGYCQNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCENLT 602
Query: 110 --GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
G+ L + +L+ L+L I D LE + + L +SL I ++ T
Sbjct: 603 DEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLTTL 662
Query: 167 L-LSFLDVSNS-SLSRF--CFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS 221
+ L LD+S SLS F FL+ + L+HL+LS + D +E + + NL+ L+LS
Sbjct: 663 VNLEHLDLSGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPL-MNLQYLDLS 721
Query: 222 NT-RFSSAGVGILAGHLP-NLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS---NTDIK 275
+ + G+ L + L+ L LSG +I D +++++ + L+++D+S N K
Sbjct: 722 SCINLTDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDK 781
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-S 333
G L L + L+ LNL+ +++DA L L++ L L+L +
Sbjct: 782 G--------------LAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVN 827
Query: 334 LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSF 366
LTD L L SL L +L +R+ +T++GL +
Sbjct: 828 LTDTGLAHLVSLVNLQDLELRECKSITDTGLAHY 861
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 202/421 (47%), Gaps = 53/421 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL + +L+ L LS+ LT DG+A L+ L L L L
Sbjct: 408 LTALQYLDLSGCDDLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLAHLTPLVALRHLGLS 467
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGV 111
+TD L L LT L++LDL + +++ G L L +L NL G+
Sbjct: 468 DCRNLTDAGLAHLTPLTALKHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGL 527
Query: 112 TKLPNISSLECLNLS-------NCTIDSILEGNENKAPLAKISLAGTTFINERE----AF 160
L ++++LE L+L N T D + A L+ ++ ++ RE A
Sbjct: 528 AHLTSLTALEHLDLGLDFGYCQNLTDDGL-------AHLSSLTALKHLDLSWRENLTDAG 580
Query: 161 LYIETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
L TSL L LD+S N + +LT + AL++L L S I D+ +E +A + A L
Sbjct: 581 LAHLTSLTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSA-L 639
Query: 216 RNLNLSNTRFSSAGVGILAGHLP---NLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN 271
R+L+L++ R G G+ HL NLE L LSG + + + ++S + +L+ +++S
Sbjct: 640 RHLSLNDCRRIYHGYGL--AHLTTLVNLEHLDLSGCYSLSSFKLIFLSSLVNLQHLNLSG 697
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSL 329
G D + LT L NL +L+ + ++D L L++ L HL L
Sbjct: 698 C--------FGLYHDGLEDLTPLMNLQYLDLSSC--INLTDKGLAYLTSLVGLGLQHLDL 747
Query: 330 RNAS-LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+TD L L+SL L L + LT+ GL LK L+L G +T+
Sbjct: 748 SGCKEITDTGLAHLTSLVGLEYLDLSWCENLTDKGLAYLTSFAGLKYLNLKGCKKITDAG 807
Query: 388 I 388
+
Sbjct: 808 L 808
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 179/388 (46%), Gaps = 54/388 (13%)
Query: 12 CVKV----TDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGL-PVTD 65
C+K+ D G+ HL S++ L+ L LSE L D G+A LSSL L LDL G +TD
Sbjct: 365 CLKIFYTPIDTGLAHLTSLTALQNLDLSECYLLKDTGLAHLSSLTALQYLDLSGCDDLTD 424
Query: 66 LVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNIS 118
L L L L++LDL + ++ G A L L L NL G+ L ++
Sbjct: 425 AGLAHLTPLVSLQHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLT 484
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L+ L+LS C ++ G ++ A Y+ L +++++ L
Sbjct: 485 ALKHLDLSEC---------------KNLTDDGLVHLSSLVALQYLSLKLCE--NLTDAGL 527
Query: 179 SRFCFLTQMKALEHLDLSSSM-----IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGI 232
+ LT + ALEHLDL + DD + ++ + A L++L+LS + AG+
Sbjct: 528 AH---LTSLTALEHLDLGLDFGYCQNLTDDGLAHLSSLTA-LKHLDLSWRENLTDAGLAH 583
Query: 233 LAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
L L L+ L LS + + D ++Y++ + +L+++ + +DI G E L
Sbjct: 584 LTS-LTALKHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDIT----DEGLE-----HL 633
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTN 350
L L HL LN + L L+T L HL L SL+ L LSSL L +
Sbjct: 634 AHLSALRHLS-LNDCRRIYHGYGLAHLTTLVNLEHLDLSGCYSLSSFKLIFLSSLVNLQH 692
Query: 351 LSIRDAV-LTNSGLGSFKPPRSLKLLDL 377
L++ L + GL P +L+ LDL
Sbjct: 693 LNLSGCFGLYHDGLEDLTPLMNLQYLDL 720
>gi|46446659|ref|YP_008024.1| hypothetical protein pc1025 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400300|emb|CAF23749.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 695
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 177/378 (46%), Gaps = 66/378 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-G 59
+T L+ LDL C K+TD G+ HL ++ L++L LS T G++ LS L L L+L
Sbjct: 349 LTALQRLDLRYCEKLTDDGLVHLRPLTALQRLNLSNCWHTGAGLSHLSPLTGLQHLNLYE 408
Query: 60 GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVT 112
+ +TD L L++LT L++L+L + ++++ G LK+ L LNL+ G+
Sbjct: 409 CINLTDAGLVHLKLLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGLV 468
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
L ++ L+ LNLS C +++ AG + ++ S +
Sbjct: 469 HLKFLTGLQHLNLSYCD---------------ELTDAGLVHLKLLTGLQHLNLS-----N 508
Query: 173 VSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+N + + LT + L+HLDLS S + DD + + + A L+ LNLSN R
Sbjct: 509 CNNLTDAGLAHLTPLTGLQHLDLSYCSKLTDDGLAHLKPLTA-LQCLNLSNCR------- 560
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
+ D + ++ ++ L+ +++S D K D ++ L
Sbjct: 561 -----------------NLTDAGLVHLKLLTGLQHLNLS--DYKNLTD------DGLIHL 595
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTN 350
L L HLE L E ++DA L L+ L HL+L + LTD L L+SL+ L +
Sbjct: 596 MPLMALRHLELLGCE--NLTDAGLVHLTPLTALQHLNLSHCDDLTDAGLAHLTSLTGLQH 653
Query: 351 LSIRDAV-LTNSGLGSFK 367
L + LT++GL FK
Sbjct: 654 LELLGCENLTDAGLARFK 671
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 194/403 (48%), Gaps = 49/403 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
LK L L +C +TD G+ HL ++ L+ L LS + LT G+ L+ L L L+LG
Sbjct: 252 LKVLHLEKCRALTDDGLAHLTPLTALQYLNLSASYNLTDAGLVHLAPLTALQKLNLGRYN 311
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKL 114
+TD L L+ LT L+ LDL + +++ G A L+ L L+L + G+ L
Sbjct: 312 QLTDAGLAHLKPLTALQRLDLSFCEDLTDDGLAHLRPLTALQRLDLRYCEKLTDDGLVHL 371
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDV 173
+++L+ LNLSNC A L+ +S L G +N E +++
Sbjct: 372 RPLTALQRLNLSNCW--------HTGAGLSHLSPLTGLQHLNLYEC-----------INL 412
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGI 232
+++ L LT L+HL+LS D+ + + L++LNLSN + AG+ +
Sbjct: 413 TDAGLVHLKLLT---GLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCNNLTDAGL-V 468
Query: 233 LAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 290
L L+ L+LS ++ D + ++ ++ L+ +++SN + TD L+
Sbjct: 469 HLKFLTGLQHLNLSYCDELTDAGLVHLKLLTGLQHLNLSNCN---------NLTDAGLAH 519
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLT 349
LT L L HL+ ++++D L L L L+L N +LTD L L L+ L
Sbjct: 520 LTPLTGLQHLDLSYC--SKLTDDGLAHLKPLTALQCLNLSNCRNLTDAGLVHLKLLTGLQ 577
Query: 350 NLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
+L++ D LT+ GL P +L+ L+L G LT+ ++
Sbjct: 578 HLNLSDYKNLTDDGLIHLMPLMALRHLELLGCENLTDAGLVHL 620
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS--- 270
+ LN SN R+ + ++ + NL++L L + + D +++++ + +L+++++S
Sbjct: 227 IEGLNFSNNRYLTDAHLLILKNCKNLKVLHLEKCRALTDDGLAHLTPLTALQYLNLSASY 286
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
N G + + LTALQ LN L R N Q++DA L L L L L
Sbjct: 287 NLTDAGLVH--------LAPLTALQKLN-LGRYN----QLTDAGLAHLKPLTALQRLDLS 333
Query: 331 NAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGW 381
LTD L L L+ L L +R LT+ GL +P +L+ L+L W
Sbjct: 334 FCEDLTDDGLAHLRPLTALQRLDLRYCEKLTDDGLVHLRPLTALQRLNLSNCW 386
>gi|449436168|ref|XP_004135866.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
gi|449509305|ref|XP_004163550.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
Length = 578
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 174/386 (45%), Gaps = 67/386 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L+ L+L+ C ++D G+ H+ S L L + + +TA G+++ + L NL LDL P
Sbjct: 158 LQSLNLNFCEHISDRGLAHIGGFSRLTSLSFRKNSEITAQGMSVFAHLVNLIRLDLEKCP 217
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L LQ L KLE L++ W + +++ L L L ++ + G+ L
Sbjct: 218 GIHGGLVHLQGLRKLESLNIKWCNCITDSDIKPLSGLTNLKGLQISCSKVTDAGIAYLKG 277
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ L LNL C + + A LY
Sbjct: 278 LHKLSLLNLEGCPVTA--------------------------ACLYT------------- 298
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L+ + AL++L+LS I DD E + +GA L+ LNL + + L G
Sbjct: 299 -------LSALGALQYLNLSRCHITDDGSEQFSGLGA-LKILNLGFNDITDECLVHLKG- 349
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L NLE L+L +I+D + + + LK +++S+TD VG+ L L
Sbjct: 350 LTNLESLNLDSCRIEDDGLVNLKALHRLKCLELSDTD-------VGSN-----GLRHLSG 397
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L +LE+LNL T V+D L LS L L+L +TD+ L L+ L LT+L + A
Sbjct: 398 LFNLEKLNLSFTVVTDIGLKKLSGLSSLKSLNLDTRQITDIGLASLTGLVGLTHLDLFGA 457
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWL 382
+T+SG + ++L+ L++ GG L
Sbjct: 458 RITDSGTNYLRNFKNLQSLEICGGGL 483
>gi|46446666|ref|YP_008031.1| hypothetical protein pc1032 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400307|emb|CAF23756.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 734
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 179/390 (45%), Gaps = 70/390 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+L+RC +TDAG+ HL ++ L+ L LSE LT G+A L+ L L LDL
Sbjct: 348 LTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLS 407
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L++LDL Q ++ G A L L +LNL+ G+
Sbjct: 408 RCNSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGL 467
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L +++L+ LNL NC F
Sbjct: 468 AHLTPLTALQHLNLCNCR---------------------------------------KFT 488
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS-NTRFSSAG 229
D + LT + AL+HLDLS + DD + +A + L+ L LS + + AG
Sbjct: 489 D------NGLAHLTPLTALQHLDLSHCKNLTDDGLAHLAPL-TGLQRLVLSWCDKLTDAG 541
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
+ L L L+ L LS +I D +++++ + L+ + + Q A +
Sbjct: 542 LAHLTP-LTALQYLDLSCCEITDAGLAHLTPLTGLQHLVLVYC-----WQLTDAGLAHLT 595
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 348
LT LQ L +L N +++DA L L+ L HL+L + LTD L L+ L+ L
Sbjct: 596 PLTTLQYL-YLGSCN----RLTDAGLAHLAPLTALQHLALNDCRKLTDTGLAHLTPLTAL 650
Query: 349 TNLSI-RDAVLTNSGLGSFKPPRSLKLLDL 377
+L++ R LT+ GL KP +L+ LDL
Sbjct: 651 QHLTLNRCEKLTDDGLAHLKPLAALQYLDL 680
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 215/410 (52%), Gaps = 38/410 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C K+TD G+ HL ++ L+ L LS + LT G+A L+ L L L+L
Sbjct: 273 LTTLQYLDLSDCEKLTDDGLAHLTPLTGLQHLDLSWCSSLTDAGLAHLTPLTALQHLNLN 332
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA--W----TGV 111
+ D L L LT L++L+L +++ G + LK L LNL+ W G+
Sbjct: 333 RCEYLKDAGLAHLTPLTGLQHLNLNRCKDLTDAGLSHLKPLTALQHLNLSECWKLTDAGL 392
Query: 112 TKLPNISSLECLNLSNCTIDSILE-GNENKAPLAKIS-LAGTTFINEREAFLYIETSL-- 167
L +++L+ L+LS C +S+ + G + PL + L + N +A L TSL
Sbjct: 393 AHLTPLTALQHLDLSRC--NSLTDAGLAHLTPLTALQHLDLSDCQNFTDAGLAHLTSLTG 450
Query: 168 LSFLDVS---NSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNT 223
L +L++S N + + LT + AL+HL+L + D+ + + + A L++L+LS+
Sbjct: 451 LQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKFTDNGLAHLTPLTA-LQHLDLSHC 509
Query: 224 R-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ + G+ LA L L+ L LS ++ D +++++ + +L+++D+S +I
Sbjct: 510 KNLTDDGLAHLAP-LTGLQRLVLSWCDKLTDAGLAHLTPLTALQYLDLSCCEI------- 561
Query: 282 GAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSL 339
TD L+ LT L L HL + Q++DA L L+ L +L L + + LTD L
Sbjct: 562 ---TDAGLAHLTPLTGLQHLVLVYC--WQLTDAGLAHLTPLTTLQYLYLGSCNRLTDAGL 616
Query: 340 HQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
L+ L+ L +L++ D LT++GL P +L+ L L+ LT+D +
Sbjct: 617 AHLAPLTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEKLTDDGL 666
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 179/376 (47%), Gaps = 41/376 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C K+TDAG+ HL ++ L+ L LS LT G+A L+ L L LDL
Sbjct: 373 LTALQHLNLSECWKLTDAGLAHLTPLTALQHLDLSRCNSLTDAGLAHLTPLTALQHLDLS 432
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 111
TD L L LT L+YL+L + +++ G A L L LNL G+
Sbjct: 433 DCQNFTDAGLAHLTSLTGLQYLNLSEYKNLTDAGLAHLTPLTALQHLNLCNCRKFTDNGL 492
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLA-----------KISLAGTTFINEREAF 160
L +++L+ L+LS+C + +G + APL K++ AG + A
Sbjct: 493 AHLTPLTALQHLDLSHCK-NLTDDGLAHLAPLTGLQRLVLSWCDKLTDAGLAHLTPLTAL 551
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
Y++ LS +++++ L+ LT + L+HL L D+ L+ L L
Sbjct: 552 QYLD---LSCCEITDAGLAH---LTPLTGLQHLVLVYCWQLTDAGLAHLTPLTTLQYLYL 605
Query: 221 -SNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
S R + AG+ LA L L+ L+L+ ++ D +++++ + +L+ + ++ + +
Sbjct: 606 GSCNRLTDAGLAHLAP-LTALQHLALNDCRKLTDTGLAHLTPLTALQHLTLNRCEK---L 661
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
G L L+ L L+ L+L +++DA L L+ L L L +TD
Sbjct: 662 TDDG--------LAHLKPLAALQYLDLSYCEITDAGLAHLTHLMALQRLDLYGREITDDG 713
Query: 339 LHQLSSLSKLTNLSIR 354
L + +L+ NL IR
Sbjct: 714 LERFETLAASFNLEIR 729
>gi|226534290|gb|ACO71421.1| AT4G23840-like protein [Capsella rubella]
gi|226534292|gb|ACO71422.1| AT4G23840-like protein [Capsella rubella]
gi|226534294|gb|ACO71423.1| AT4G23840-like protein [Capsella rubella]
gi|226534296|gb|ACO71424.1| AT4G23840-like protein [Capsella rubella]
gi|226534298|gb|ACO71425.1| AT4G23840-like protein [Capsella rubella]
gi|226534300|gb|ACO71426.1| AT4G23840-like protein [Capsella rubella]
gi|226534302|gb|ACO71427.1| AT4G23840-like protein [Capsella rubella]
gi|226534304|gb|ACO71428.1| AT4G23840-like protein [Capsella rubella]
gi|226534306|gb|ACO71429.1| AT4G23840-like protein [Capsella rubella]
gi|226534308|gb|ACO71430.1| AT4G23840-like protein [Capsella rubella]
gi|226534310|gb|ACO71431.1| AT4G23840-like protein [Capsella rubella]
gi|226534312|gb|ACO71432.1| AT4G23840-like protein [Capsella rubella]
gi|226534314|gb|ACO71433.1| AT4G23840-like protein [Capsella rubella]
gi|226534316|gb|ACO71434.1| AT4G23840-like protein [Capsella rubella]
gi|226534318|gb|ACO71435.1| AT4G23840-like protein [Capsella rubella]
gi|226534320|gb|ACO71436.1| AT4G23840-like protein [Capsella rubella]
gi|226534324|gb|ACO71438.1| AT4G23840-like protein [Capsella rubella]
gi|226534326|gb|ACO71439.1| AT4G23840-like protein [Capsella rubella]
gi|226534328|gb|ACO71440.1| AT4G23840-like protein [Capsella rubella]
gi|226534330|gb|ACO71441.1| AT4G23840-like protein [Capsella rubella]
gi|226534332|gb|ACO71442.1| AT4G23840-like protein [Capsella rubella]
gi|226534334|gb|ACO71443.1| AT4G23840-like protein [Capsella rubella]
gi|226534336|gb|ACO71444.1| AT4G23840-like protein [Capsella rubella]
gi|226534338|gb|ACO71445.1| AT4G23840-like protein [Capsella rubella]
gi|226534340|gb|ACO71446.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534346|gb|ACO71449.1| AT4G23840-like protein [Capsella grandiflora]
gi|226534350|gb|ACO71451.1| AT4G23840-like protein [Capsella grandiflora]
Length = 90
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LTKLEYLD+WGS V+N GA + F LSFLNL+WT VT+ NI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTNLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSI 61
Query: 134 LEGNENK-APLAKISLAGTTFINEREAF 160
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSPLASLKKLVLSGATFSAETESF 89
>gi|149175912|ref|ZP_01854530.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845359|gb|EDL59704.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 495
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 171/352 (48%), Gaps = 36/352 (10%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V+D G++++ LE+L+L ET +T +G+ + L+NL L L +TD L +L+ L
Sbjct: 159 VSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQGLKNLKSLMLNETEITDSGLTALRNL 218
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+LE L L ++++ G L+ RLS L L+ T +T +I L+ L
Sbjct: 219 DQLEELFLNETKITGAGLKKLERLTRLSKLILSETDITD-ADIKYLKEL----------- 266
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALE 191
L ++ L T ++ + + ++ L LDVSN+ ++ L K
Sbjct: 267 ------PALKRLYLDQTQLTDDGLSQI-VDFPSLEMLDVSNNQITDAGLIYLLQNGKQWS 319
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
++LS + I D + ++ L L+LSNT + AG+ L + L LSL+ QI
Sbjct: 320 SINLSGNQITDAGLSILGKSHIEL-TLDLSNTEVTDAGLKYLT-SMNMLFGLSLNNCQIS 377
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D + + +P+LK I ++ TDI TD SL ++ + + L L+ T+++
Sbjct: 378 DQGVQTLMELPALKSIQLNGTDI----------TD--CSLEIIKTKSDMLVLYLDDTKLT 425
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
DA L L LSL N ++TD SL + ++KL L+++ ++++ +
Sbjct: 426 DAGFSQLQGLTGLQILSLNNTAVTDASLKFFNKMTKLFELNLKQTAVSDAAV 477
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 29/388 (7%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++TD G+ L + L+ L+++ ++ GI L ++ L L LGG +TD L+
Sbjct: 87 EITDQGLTLLRDLQGLQSLYITNNQISDAGIQQLPQVK-LVELTLGGTKITDESLKHFSN 145
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
+ L L++ + VS+RG + F +L L L T G+ ++ + +L+ L L+
Sbjct: 146 SSDLNTLNVGKTAVSDRGLQYVSQFKKLERLYLHETQITDEGMQQIQGLKNLKSLMLNET 205
Query: 129 TI-DSILEGNENKAPLAKISLAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRFCF 183
I DS L N L ++ L T + + E + +LS D++++ + +
Sbjct: 206 EITDSGLTALRNLDQLEELFLNETKITGAGLKKLERLTRLSKLILSETDITDADIK---Y 262
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L ++ AL+ L L + + DD + + +L L++SN + + AG+ L + +
Sbjct: 263 LKELPALKRLYLDQTQLTDDGLSQIVDF-PSLEMLDVSNNQITDAGLIYLLQNGKQWSSI 321
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+LSG QI D +S + +D+SNT++ TD L L ++N L L
Sbjct: 322 NLSGNQITDAGLSILGKSHIELTLDLSNTEV----------TDA--GLKYLTSMNMLFGL 369
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+L Q+SD + L L + L +TD SL + + S + L + D LT++G
Sbjct: 370 SLNNCQISDQGVQTLMELPALKSIQLNGTDITDCSLEIIKTKSDMLVLYLDDTKLTDAGF 429
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAILQF 391
+ L++L L+ + DA L+F
Sbjct: 430 SQLQGLTGLQILSLNNTAV--TDASLKF 455
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 28/316 (8%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++TD GM+ + + L+ L L+ET +T G+ L +L L L L +T L+ L+
Sbjct: 182 QITDEGMQQIQGLKNLKSLMLNETEITDSGLTALRNLDQLEELFLNETKITGAGLKKLER 241
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
LT+L L L + +++ LK P L L L T G++++ + SLE L++SN
Sbjct: 242 LTRLSKLILSETDITDADIKYLKELPALKRLYLDQTQLTDDGLSQIVDFPSLEMLDVSNN 301
Query: 129 TID--SILEGNENKAPLAKISLAGTTFINEREAFL---YIETSL-LSFLDVSNSSLSRFC 182
I ++ +N + I+L+G + + L +IE +L LS +V+++ L
Sbjct: 302 QITDAGLIYLLQNGKQWSSINLSGNQITDAGLSILGKSHIELTLDLSNTEVTDAGLK--- 358
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+LT M L L L++ I D V+ + + A L+++ L+ T + + I+ ++ +
Sbjct: 359 YLTSMNMLFGLSLNNCQISDQGVQTLMELPA-LKSIQLNGTDITDCSLEIIKTK-SDMLV 416
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L L T++ D S + + L+ + ++NT A TD SL + L
Sbjct: 417 LYLDDTKLTDAGFSQLQGLTGLQILSLNNT----------AVTD--ASLKFFNKMTKLFE 464
Query: 303 LNLEQTQVSDATLFPL 318
LNL+QT VSDA + L
Sbjct: 465 LNLKQTAVSDAAVQKL 480
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 202 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
DDS+ + + +L + T + G+ +L L L+ L ++ QI D I +
Sbjct: 65 DDSILVHVSKLTEVTSLWIIGTEITDQGLTLLR-DLQGLQSLYITNNQISDAGIQ---QL 120
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
P +K ++++ +G SL N + L LN+ +T VSD L +S F
Sbjct: 121 PQVKLVELT----------LGGTKITDESLKHFSNSSDLNTLNVGKTAVSDRGLQYVSQF 170
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
K+L L L +TD + Q+ L L +L + + +T+SGL + +
Sbjct: 171 KKLERLYLHETQITDEGMQQIQGLKNLKSLMLNETEITDSGLTALR 216
>gi|168698219|ref|ZP_02730496.1| hypothetical protein GobsU_01767 [Gemmata obscuriglobus UQM 2246]
Length = 380
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 157/352 (44%), Gaps = 42/352 (11%)
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 114
G VTD L+ L L L +DL + V+N G VL F L+ L+L TG+T +L
Sbjct: 57 GHRVTDEELKELLPLKSLTSIDLSHTGVTNAGLKVLVAFKSLTTLSLHDTGITDAGLKEL 116
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ +L NLSN + T + E A + L +++
Sbjct: 117 APLKNLTAFNLSNTKVTD-------------------TGLKELTAIRNLTALHLRKTEIT 157
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
++ L L MK L LDLS + + D ++ +A + L NL L NT + G+ LA
Sbjct: 158 DAGLKS---LPPMKDLTTLDLSDTKVTDAGLKALAPL-ERLTNLYLYNTEVTDTGLKELA 213
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
NL +L L T++ D + ++ + SL + + T++ TD L L
Sbjct: 214 PS-KNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEV----------TDA--GLKEL 260
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L +L LNL T+V+DA + L+ F+ L L L ++TD + +L+ L +L +
Sbjct: 261 APLKNLTALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELS 320
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 406
+T+ GL + L L L T I +F K P+ +VW+ LS+
Sbjct: 321 STAVTDVGLKELASLKKLTKLFLISTK-TTFAGIKEFQKAAPKCDVWNTLSL 371
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TDAG+K L + L LS T +T G+ L++++NL+ L L +TD L+SL +
Sbjct: 108 ITDAGLKELAPLKNLTAFNLSNTKVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPM 167
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L LDL ++V++ G L RL+ L L T VT
Sbjct: 168 KDLTTLDLSDTKVTDAGLKALAPLERLTNLYLYNTEVTD--------------------- 206
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
G + AP +++ LL V+++ L L +K+L L
Sbjct: 207 TGLKELAPSKNLAVL-----------------LLYNTKVTDAGLKE---LAPLKSLSVLV 246
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
L + + D ++ +A + NL LNL T+ + AGV LA NL +L LSGT + D
Sbjct: 247 LGETEVTDAGLKELAPL-KNLTALNLYGTKVTDAGVKELA-PFQNLTLLDLSGTNVTDAG 304
Query: 255 ISYMSMMPSLKFIDISNTDI 274
I ++ +L +++S+T +
Sbjct: 305 IKELARFKNLAHLELSSTAV 324
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 2 TCLKELDLSRCV--------KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNL 53
T LKEL S+ + KVTDAG+K L + +L L L ET +T G+ L+ L+NL
Sbjct: 207 TGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGETEVTDAGLKELAPLKNL 266
Query: 54 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
+ L+L G VTD ++ L L LDL G+ V++ G L F L+ L L+ T VT
Sbjct: 267 TALNLYGTKVTDAGVKELAPFQNLTLLDLSGTNVTDAGIKELARFKNLAHLELSSTAVTD 326
Query: 114 --LPNISSLECL 123
L ++SL+ L
Sbjct: 327 VGLKELASLKKL 338
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 25/251 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KVTD G+K L +I L L L +T +T G+ L +++L+ LDL VTD L++L
Sbjct: 131 KVTDTGLKELTAIRNLTALHLRKTEITDAGLKSLPPMKDLTTLDLSDTKVTDAGLKALAP 190
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
L +L L L+ ++V++ G L L+ L L T VT +L + SL L L
Sbjct: 191 LERLTNLYLYNTEVTDTGLKELAPSKNLAVLLLYNTKVTDAGLKELAPLKSLSVLVLGET 250
Query: 129 TIDSILEGNENKAPLAKIS---LAGTTF----INEREAFLYIETSLLSFLDVSNSSLSRF 181
+ G + APL ++ L GT + E F L+ LD+S ++++
Sbjct: 251 EVTDA--GLKELAPLKNLTALNLYGTKVTDAGVKELAPFQN-----LTLLDLSGTNVTDA 303
Query: 182 CF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
L + K L HL+LSS+ + D ++ +A + L L L +T+ + AG+ P
Sbjct: 304 GIKELARFKNLAHLELSSTAVTDVGLKELASL-KKLTKLFLISTKTTFAGIKEFQKAAPK 362
Query: 240 LEI---LSLSG 247
++ LSL G
Sbjct: 363 CDVWNTLSLKG 373
>gi|330842680|ref|XP_003293301.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
gi|325076385|gb|EGC30175.1| hypothetical protein DICPUDRAFT_158109 [Dictyostelium purpureum]
Length = 684
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 62/305 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDL +TD G K+L ++ LE+L+L T ++ G+A L L NL LD+ +
Sbjct: 341 LRVLDLRHNRNLTDVGCKNLKNLVNLEELYLGSTSISDLGVAFLKQLVNLKTLDVSRCKI 400
Query: 64 TDLVLRSL-------------------------QVLTKLEYLDLWGSQ-VSNRGAAVLKM 97
TD + ++ Q+LT ++YL L Q ++N+ L
Sbjct: 401 TDNAMVTISLFSKLTLLNLSETQITDVAISNIHQILTNIQYLYLSNCQKLTNKSLFFLTY 460
Query: 98 FPRLSFLNLAWTGVT--------KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 149
F ++ L++ T ++ +LPN+ LE N C D + + L K+ L
Sbjct: 461 FSKMRLLSITGTQISLNGFVHLKRLPNLLYLELPN-RYCLNDQTIVYLNSLTKLKKLDLT 519
Query: 150 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
T+I E L +K LE L L+++ +GD SV +
Sbjct: 520 DYTYITSIEP------------------------LDNLKYLEELLLANTRVGDSSVPAIK 555
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ + L L+L T +SAGV L NL+ LSL T+IDD +I+Y+S + SL+ ++I
Sbjct: 556 KMKS-LEVLSLDRTDITSAGVAGLVD--LNLKSLSLMKTKIDDDSINYLSEIKSLRQLNI 612
Query: 270 SNTDI 274
S+ +I
Sbjct: 613 SHNNI 617
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 214 NLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
NLR L+L + R + G L L NLE L L T I D ++++ + +LK +D+S
Sbjct: 340 NLRVLDLRHNRNLTDVGCKNLKN-LVNLEELYLGSTSISDLGVAFLKQLVNLKTLDVSRC 398
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL-STFKELIHLSLRN 331
I TD + +L + L LNL +TQ++D + + + +L L N
Sbjct: 399 KI----------TDNAMVTISL--FSKLTLLNLSETQITDVAISNIHQILTNIQYLYLSN 446
Query: 332 A-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
LT+ SL L+ SK+ LSI ++ +G K +L L+L + L + I+
Sbjct: 447 CQKLTNKSLFFLTYFSKMRLLSITGTQISLNGFVHLKRLPNLLYLELPNRYCLNDQTIV 505
>gi|225463572|ref|XP_002270172.1| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
gi|297743556|emb|CBI36423.3| unnamed protein product [Vitis vinifera]
Length = 578
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 50/411 (12%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDL-- 58
T L+ L+L+ C +++D G+KH+ +S L L + +TA G++ SSL NL LDL
Sbjct: 156 TNLQALNLNYCDQISDHGLKHISGLSNLTTLSFRRNNAITAQGMSAFSSLVNLVKLDLER 215
Query: 59 -----GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 95
GGL +TD L+ L LT L+ L++ S+V++ G A L
Sbjct: 216 CPGIHGGLIHLKGLTKLESLNINMCHCITDADLKPLSGLTNLKGLEISRSKVTDDGVAYL 275
Query: 96 KMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL---EGNENKAPLAKISLAGTT 152
K +L+ LN+ VT S + +L + ++ + +G EN A + +
Sbjct: 276 KGLHKLALLNMEGCPVTAACLESLSDLPSLLSLNLNRSMLSDDGCENFARQENLRVLNLG 335
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSMIGDDSVEM 207
F + +A L + L+ L+ N R C LT ++ L+ L+LS + +G + +
Sbjct: 336 FNDLTDACL-VHLKGLTNLESLNLDSCRICDEGLANLTGLRHLKCLELSDTEVGSNGLRH 394
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
++ + ANL ++NLS T + +G+ L+ L +L+ L+L QI D ++ ++ + L +
Sbjct: 395 LSGL-ANLESINLSFTAVTDSGLRKLS-ALSSLKSLNLDARQITDAGLAALTSLTGLTHL 452
Query: 268 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
D+ I TD S L+N +L+ L + ++DA + + L L
Sbjct: 453 DLFGARI----------TDSGTSY--LRNFKNLQSLEICGGGLTDAGVKNIKDLTCLTVL 500
Query: 328 SL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+L +N +LTD SL +S L+ L +LS+ ++ +TN+GL K ++LK L L
Sbjct: 501 NLSQNCNLTDKSLELISGLTALVSLSVSNSRITNAGLQHLKQLKNLKSLTL 551
>gi|320163275|gb|EFW40174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 989
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 31/333 (9%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+EL + VT G+ H+ ++ L L L T L + +S L L+VL+L +
Sbjct: 514 LQELSIRSAEFVTHVGINHIAGLNNLRVLDLGITRLNDQAMPTISQLP-LTVLNLERTLI 572
Query: 64 TDLVLRSLQVL-TKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW---TGVTKLPNIS 118
TD L L L L++LD+ S+++ RG A+L FP+L L +A T V +L N
Sbjct: 573 TDSGLARLAPLGATLQHLDISDCSKLTERGLALLAAFPQLRTLAIAGLPLTDVGRLSNFP 632
Query: 119 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF-----LD 172
L LNL+ I + L+ L +SLA T + +L T+L S
Sbjct: 633 ELRSLNLARTAIVEGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQYLTNLSSLKLPSRFQ 692
Query: 173 VSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ NSS++ L L LDL+ + + D+ ++ ++ + L +L+LSNT+ +SAG+
Sbjct: 693 IGNSSIAHISKL----PLTELDLTDYIHVTDEGIQFISALAPTLVSLSLSNTKLTSAGIP 748
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV--- 288
+A LE+L L T + D I ++ + L+ + +S T + + + GA +
Sbjct: 749 AVAA-CTKLEVLQLDRTPLKDDVIPLLAPLTRLRTLSLSRTHLTSAVVRSGAFSPFTRLE 807
Query: 289 ---LSLTALQN-------LNHLERLNLEQTQVS 311
LS T ++N L L LNL+ T+V+
Sbjct: 808 SLNLSWTFIENQGLDQLRLPMLTTLNLDSTRVT 840
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 40/162 (24%)
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQID 251
L+L ++I D + +A +GA L++L++S+ ++ + G+ +LA P L L+++G
Sbjct: 565 LNLERTLITDSGLARLAPLGATLQHLDISDCSKLTERGLALLAA-FPQLRTLAIAG---- 619
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
L D+ L N L LNL +T +
Sbjct: 620 ------------LPLTDVGR----------------------LSNFPELRSLNLARTAIV 645
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ L + + L+HLSL N L D + L L+ L++L +
Sbjct: 646 EGKLDSIRRYIHLVHLSLANTKLGDNDVRYLQYLTNLSSLKL 687
>gi|226534322|gb|ACO71437.1| AT4G23840-like protein [Capsella rubella]
Length = 90
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LTKLEYLD+WGS V++ GA + F LSFLNL+WT VT+ NI LECL+++ C I SI
Sbjct: 2 LTKLEYLDIWGSNVTDLGAICILKFSNLSFLNLSWTSVTQTLNIPHLECLHMNKCDIVSI 61
Query: 134 LEGNENK-APLAKISLAGTTFINEREAF 160
+ + + A L K+ L+G TF E E+F
Sbjct: 62 SKTHSSPLASLKKLVLSGATFSAETESF 89
>gi|226505324|ref|NP_001147302.1| regulatory subunit [Zea mays]
gi|195609698|gb|ACG26679.1| regulatory subunit [Zea mays]
gi|413937767|gb|AFW72318.1| regulatory subunit isoform 1 [Zea mays]
gi|413937768|gb|AFW72319.1| regulatory subunit isoform 2 [Zea mays]
Length = 582
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 174/365 (47%), Gaps = 42/365 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C + D+ +K+L ++ L+ L LS +T G++ + LQ L+ L+L G
Sbjct: 233 LTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEG 292
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
PVT L ++ L+ L L+L + + G + RL LNL + +T L
Sbjct: 293 CPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLK 352
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ SLE LNL +C I G ++ + + +++ LS +V N
Sbjct: 353 ELISLESLNLDSCKI-------------------GDDGLSHLKGLVLLQSLELSDTEVGN 393
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ L L+ ++ L+ ++LS +++ D V+ ++ + + L+++NL N + + G+ L
Sbjct: 394 NGLQH---LSGLRNLQSINLSFTLVTDIGVKKISVLNS-LKSVNLDNRQITDVGLAALIS 449
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L L G I D + +L +++ GF+ G + ++
Sbjct: 450 -LTRLTHLDLFGACITDNGTNCFRYFKNLVSLEVCG----GFVTDAGVKN--------IK 496
Query: 296 NLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+L L LNL Q ++D TL +S LI+L++ N+ +++ L L+ L L +LS+
Sbjct: 497 DLKALTLLNLSQNANLTDKTLELISGLTALINLNVSNSRVSNAGLKHLNDLHNLRSLSLD 556
Query: 355 DAVLT 359
+T
Sbjct: 557 STRVT 561
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 174/392 (44%), Gaps = 82/392 (20%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLGGLPVTDLVLRS 70
C+K+ G+ HL ++ LE L + AD I L+ L NL L L +TDL +
Sbjct: 220 CLKI-HGGLIHLKDLTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSY 278
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
++ L KL +L+L G V+ AA L+ A +G++ L ++ C
Sbjct: 279 IRGLQKLTHLNLEGCPVT---AACLE----------AISGLSSLVLLNLNRCGIYD---- 321
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+G EN L ++ + F YI + L L ++ +L
Sbjct: 322 ----DGCENFEGLKRLKVLNL-------GFNYITDACLVHL-------------KELISL 357
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
E L+L S IGDD + + + L++L LS+T + G+ L+G L NL+ ++LS T +
Sbjct: 358 ESLNLDSCKIGDDGLSHLKGL-VLLQSLELSDTEVGNNGLQHLSG-LRNLQSINLSFTLV 415
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D + +S++ SLK +++ N I TD+ L AL +L L L+L +
Sbjct: 416 TDIGVKKISVLNSLKSVNLDNRQI----------TDV--GLAALISLTRLTHLDLFGACI 463
Query: 311 SDATLFPLSTFKELIHLSL-------------------------RNASLTDVSLHQLSSL 345
+D FK L+ L + +NA+LTD +L +S L
Sbjct: 464 TDNGTNCFRYFKNLVSLEVCGGFVTDAGVKNIKDLKALTLLNLSQNANLTDKTLELISGL 523
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ L NL++ ++ ++N+GL +L+ L L
Sbjct: 524 TALINLNVSNSRVSNAGLKHLNDLHNLRSLSL 555
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L +LE L+L +I D +S++ + L+ +++S+T +VG L L
Sbjct: 353 ELISLESLNLDSCKIGDDGLSHLKGLVLLQSLELSDT-------EVGNN-----GLQHLS 400
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L +L+ +NL T V+D + +S L ++L N +TDV L L SL++LT+L +
Sbjct: 401 GLRNLQSINLSFTLVTDIGVKKISVLNSLKSVNLDNRQITDVGLAALISLTRLTHLDLFG 460
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWL 382
A +T++G F+ ++L L++ GG++
Sbjct: 461 ACITDNGTNCFRYFKNLVSLEVCGGFV 487
>gi|168701031|ref|ZP_02733308.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 389
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 35/321 (10%)
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPN 116
G TD L+ L + L L+L +QV++ + FP+L+ LN+++T +T L
Sbjct: 50 GAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDEGLRE 109
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
I+ L L++ +D K+S +G + A + T L V+++
Sbjct: 110 IAGLT--ELTDLVLD-----------YTKVSGSG---LKHLAALTKLRTLSLGSKIVTDA 153
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L L ++ L LDL + + D ++ +A + + L+ L L N + G+ LA
Sbjct: 154 GLRG---LVGVRGLRQLDLRETSVTDAGLKEIAPL-SELKTLMLVNAPVTGPGLKDLA-L 208
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L+ L LSGT+I +S ++ + SL+ +++ T + TD L L
Sbjct: 209 LTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGGTPL----------TDA--GLKQLAG 256
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L L L T+V+ A L L+ K+L L L + +TD L ++++L+ LT L++RD
Sbjct: 257 FDTLGHLGLSNTKVTGAGLKELAALKQLSGLDLGSTKITDADLKEIAALTNLTGLTMRDT 316
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+T++G+ + P L+ L+L
Sbjct: 317 PVTDAGVRNLAPLTKLRRLNL 337
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 65/377 (17%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
+DLS TDAG+K L + L L L+ T +T + ++ L+VL++ +TD
Sbjct: 46 VDLSGAKTFTDAGLKELSLFAGLTNLNLTNTQVTDAALKDVARFPKLTVLNVSYTQITDE 105
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNISSLE 121
LR + LT+L L L ++VS G L +L L+L G+ L + L
Sbjct: 106 GLREIAGLTELTDLVLDYTKVSGSGLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLR 165
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
L+L ++ G + APL++ ++T +L V+ L
Sbjct: 166 QLDLRETSVTD--AGLKEIAPLSE-----------------LKTLMLVNAPVTGPGLKDL 206
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
LT+ L+ L LS TR + G+ L G L +L
Sbjct: 207 ALLTK----------------------------LQFLFLSGTRITGDGLSELTG-LKSLR 237
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
+L L GT + D + ++ +L + +SNT + G L L L L
Sbjct: 238 LLELGGTPLTDAGLKQLAGFDTLGHLGLSNTKVTGA------------GLKELAALKQLS 285
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
L+L T+++DA L ++ L L++R+ +TD + L+ L+KL L++ +TN+
Sbjct: 286 GLDLGSTKITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAPLTKLRRLNLTHTKVTNA 345
Query: 362 GLGSFKPPRSLKLLDLH 378
+ + L +DLH
Sbjct: 346 CAKTLATFKHLTSVDLH 362
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 124/279 (44%), Gaps = 54/279 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L L + VTDAG++ L+ + L +L L ET +T G+ ++ L L L L
Sbjct: 137 LTKLRTLSLGSKI-VTDAGLRGLVGVRGLRQLDLRETSVTDAGLKEIAPLSELKTLMLVN 195
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
PVT L+ L +LTKL++L L G++++ G + L L L L T G+ +L
Sbjct: 196 APVTGPGLKDLALLTKLQFLFLSGTRITGDGLSELTGLKSLRLLELGGTPLTDAGLKQLA 255
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+L L LSN K++ AG + E
Sbjct: 256 GFDTLGHLGLSNT----------------KVTGAG---LKE------------------- 277
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L +K L LDL S+ I D ++ +A + NL L + +T + AGV LA
Sbjct: 278 --------LAALKQLSGLDLGSTKITDADLKEIAAL-TNLTGLTMRDTPVTDAGVRNLA- 327
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L L L+L+ T++ + ++ L +D+ TD+
Sbjct: 328 PLTKLRRLNLTHTKVTNACAKTLATFKHLTSVDLHQTDV 366
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
ET+ + F++ S + FL+ A+ +DLS + D+ + A L NLNL+NT
Sbjct: 22 ETAAVQFVEKSGGRV----FLSD-GAVTGVDLSGAKTFTDAGLKELSLFAGLTNLNLTNT 76
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+ + A + +A P L +L++S TQI D + ++ + L + + T + G
Sbjct: 77 QVTDAALKDVA-RFPKLTVLNVSYTQITDEGLREIAGLTELTDLVLDYTKVSGS------ 129
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
L L L L L+L V+DA L L + L L LR S+TD L +++
Sbjct: 130 ------GLKHLAALTKLRTLSLGSKIVTDAGLRGLVGVRGLRQLDLRETSVTDAGLKEIA 183
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
LS+L L + +A +T GL L+ L L G
Sbjct: 184 PLSELKTLMLVNAPVTGPGLKDLALLTKLQFLFLSG 219
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KVT AG+K L ++ L L L T +T + +++L NL+ L + PVTD +R+L
Sbjct: 269 KVTGAGLKELAALKQLSGLDLGSTKITDADLKEIAALTNLTGLTMRDTPVTDAGVRNLAP 328
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
LTKL L+L ++V+N A L F L+ ++L T VT+
Sbjct: 329 LTKLRRLNLTHTKVTNACAKTLATFKHLTSVDLHQTDVTE 368
>gi|46446377|ref|YP_007742.1| hypothetical protein pc0743 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400018|emb|CAF23467.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 765
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 198/409 (48%), Gaps = 54/409 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
LK L+L C +TDAG+ HL ++ L+ L LS LT DG+ L+ L L LDL
Sbjct: 285 LKVLNLQACHNLTDAGLAHLTPLAALKHLDLSGCELTDDGLVHLTPLAALQHLDLSHCRN 344
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 115
TD L L++L L++L+L ++++ G A LK+ L L+L+ G+ L
Sbjct: 345 FTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLKLLVALQHLDLSHCRNFTDAGLAHLK 404
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKIS---------LAGTTFINEREAFLYIETS 166
+ +L+ LNLS C GN A LA ++ L G N +A L TS
Sbjct: 405 LLVALQHLNLSYC-------GNLTDAGLAHLTPLMALQHLDLNGCH--NLTDAGLTHLTS 455
Query: 167 L--LSFLDVS---NSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNL 220
L L +L++S N + + LT + AL+HL+LS D + + + A L++L+L
Sbjct: 456 LVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYCGNFTDAGLAHLTSLAA-LKHLDL 514
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
+ G+ L L L+ L+LS G DD ++++ ++ +L+ +D+S D
Sbjct: 515 IGCELTDDGLAHLKL-LVALQHLNLSYCGKLTDD-GLAHLKLLVALQHLDLSGCD----- 567
Query: 279 QQVGAETDLVLSLTALQNLN--HLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLT 335
+ GA + L ALQ+LN H +L +D L L+ L HL L + LT
Sbjct: 568 KLTGAGLAHLKFLVALQHLNLSHCGKL-------TDDGLVNLTPLAALRHLDLSHCGKLT 620
Query: 336 DVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDL-HGGWL 382
L L L L +L++ LT++GL + P +L+ LDL H G L
Sbjct: 621 GAGLAHLKFLVALQHLNLSHCGKLTDAGLVNLSPLMALQHLDLSHCGNL 669
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 200/446 (44%), Gaps = 85/446 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL- 58
+ L+ LDLS C TDAG+ HL + L+ L LS G LT G+A L L L LDL
Sbjct: 331 LAALQHLDLSHCRNFTDAGLAHLKLLVALQHLNLSHCGKLTDAGLAHLKLLVALQHLDLS 390
Query: 59 -------GGLP------------------VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGA 92
GL +TD L L L L++LDL G +++ G
Sbjct: 391 HCRNFTDAGLAHLKLLVALQHLNLSYCGNLTDAGLAHLTPLMALQHLDLNGCHNLTDAGL 450
Query: 93 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
L L +LNL+W G+ L + +L+ LNLS C GN A LA +
Sbjct: 451 THLTSLVVLQYLNLSWNYNFTDAGLAHLTPLMALQHLNLSYC-------GNFTDAGLAHL 503
Query: 147 -SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLS-SSMIGD 202
SLA L LD+ L+ L + AL+HL+LS + D
Sbjct: 504 TSLAA-----------------LKHLDLIGCELTDDGLAHLKLLVALQHLNLSYCGKLTD 546
Query: 203 DSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMS 259
D + + + A L++L+LS + + AG+ L L L+ L+LS G DD ++ ++
Sbjct: 547 DGLAHLKLLVA-LQHLDLSGCDKLTGAGLAHLK-FLVALQHLNLSHCGKLTDDGLVN-LT 603
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPL 318
+ +L+ +D+S+ G + G L L+ L L+ LNL +++DA L L
Sbjct: 604 PLAALRHLDLSHC---GKLTGAG--------LAHLKFLVALQHLNLSHCGKLTDAGLVNL 652
Query: 319 STFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLD 376
S L HL L + +LTD L LS L L +L + LT+ GL + K +L+ LD
Sbjct: 653 SPLMALQHLDLSHCGNLTDAGLVNLSPLMALQHLDLSHCGNLTDDGLVNLKFLVALQHLD 712
Query: 377 LHGGWLLTEDAILQFCKMHPRIEVWH 402
L LT+D + + P I + H
Sbjct: 713 LSHCGNLTDDGL---AHLSPLIALQH 735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 72/328 (21%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA---LLSSLQNLSVLD 57
+ L+ L+LS C TDAG+ HL S++ L+ L L LT DG+A LL +LQ+L++
Sbjct: 481 LMALQHLNLSYCGNFTDAGLAHLTSLAALKHLDLIGCELTDDGLAHLKLLVALQHLNLSY 540
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------G 110
G L TD L L++L L++LDL G +++ G A LK L LNL+ G
Sbjct: 541 CGKL--TDDGLAHLKLLVALQHLDLSGCDKLTGAGLAHLKFLVALQHLNLSHCGKLTDDG 598
Query: 111 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+ L +++L L+LS+C K++ AG + A ++ S
Sbjct: 599 LVNLTPLAALRHLDLSHC---------------GKLTGAGLAHLKFLVALQHLNLSHCG- 642
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLS-------------SSMIGDDSVEMVACVGANLRN 217
++++ L L+ + AL+HLDLS S ++ +++ C NL +
Sbjct: 643 -KLTDAGLVN---LSPLMALQHLDLSHCGNLTDAGLVNLSPLMALQHLDLSHC--GNLTD 696
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TD 273
L N +F A L +L+ LS G DD ++++S + +L+ +D S TD
Sbjct: 697 DGLVNLKFLVA--------LQHLD-LSHCGNLTDD-GLAHLSPLIALQHLDRSKYNNLTD 746
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLE 301
G LT+L +L HL+
Sbjct: 747 GSGLAH-----------LTSLVDLQHLD 763
>gi|356562920|ref|XP_003549716.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
Length = 580
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 175/379 (46%), Gaps = 64/379 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C V D+ MK + + L++L +S + +T GI L L+ L+ L++ G +
Sbjct: 234 LEYLNIGCCKCVMDSDMKSISELINLKELQISNSSITDIGITYLRGLKMLTTLNVEGCNI 293
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + L L L+L +S+ G + L L+LA+ +T L ++
Sbjct: 294 TAACLEFIHALASLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRITDACLVHLKGLT 353
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL C I G++ A L ++L +++ +LS D+ NS L
Sbjct: 354 NLEYLNLDYCRI-----GDDGLANLTGLTL--------------LKSLVLSDTDIGNSGL 394
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
++ +K LE L+LS + + D ++ ++ + L++LNL + + AG+ L L
Sbjct: 395 RH---ISGLKKLEDLNLSFTTVTDHGLKRLSGL-TQLKSLNLDARQITDAGLANLTS-LS 449
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D +++ L+ ++I G + G + ++ +
Sbjct: 450 GLIALDLFGARISDNGTTFLRSFKILQSLEICG----GGLTDAGVKN--------IREIV 497
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L +LNL Q N +LTD +L +S ++ L +L++ ++ +
Sbjct: 498 SLTQLNLSQ-----------------------NCNLTDKTLELISGMTALRSLNVSNSRI 534
Query: 359 TNSGLGSFKPPRSLKLLDL 377
TN GL KP ++L+ L L
Sbjct: 535 TNEGLRYLKPLKNLRTLTL 553
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 46/396 (11%)
Query: 14 KVTDAGMKHLLSISTLEKLWL------SETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 67
+VTD G++ L S L+ L L SE GL I+ LS+L +LS+ V
Sbjct: 145 QVTDNGLRFLKDCSNLQALTLNFCDQFSEYGLKH--ISGLSNLTSLSIRKSS--TVKPDG 200
Query: 68 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL-ECLNLS 126
+R+ L LE LDL + G LK +L +LN+ ++ S+ E +NL
Sbjct: 201 MRAFSNLFNLEKLDLERCSDIHGGFVHLKGLKKLEYLNIGCCKCVMDSDMKSISELINLK 260
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FL 184
I + + I+ G T++ + +L+ L+V +++ C F+
Sbjct: 261 ELQISN-----------SSITDIGITYLRGLK--------MLTTLNVEGCNITAACLEFI 301
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+ +L L+L+ + DD E ++ + NL+ L+L+ R + A + L G L NLE L+
Sbjct: 302 HALASLACLNLNRCGLSDDGFEKISGL-KNLKRLSLAFNRITDACLVHLKG-LTNLEYLN 359
Query: 245 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTA------- 293
L +I D ++ ++ + LK + +S+TDI I + DL LS T
Sbjct: 360 LDYCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRHISGLKKLEDLNLSFTTVTDHGLK 419
Query: 294 -LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
L L L+ LNL+ Q++DA L L++ LI L L A ++D L S L +L
Sbjct: 420 RLSGLTQLKSLNLDARQITDAGLANLTSLSGLIALDLFGARISDNGTTFLRSFKILQSLE 479
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
I LT++G+ + + SL L+L LT+ +
Sbjct: 480 ICGGGLTDAGVKNIREIVSLTQLNLSQNCNLTDKTL 515
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 45/284 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L++ C +T A ++ + ++++L L L+ GL+ DG +S L+NL L L +
Sbjct: 283 LTTLNVEGC-NITAACLEFIHALASLACLNLNRCGLSDDGFEKISGLKNLKRLSLAFNRI 341
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL------------------------KMFP 99
TD L L+ LT LEYL+L ++ + G A L
Sbjct: 342 TDACLVHLKGLTNLEYLNLDYCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRHISGLK 401
Query: 100 RLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAPL-------AKI 146
+L LNL++T VT +L ++ L+ LNL I D+ L + + L A+I
Sbjct: 402 KLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDARQITDAGLANLTSLSGLIALDLFGARI 461
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
S GTTF+ + +E D ++ LTQ+ ++ +L+ D ++E
Sbjct: 462 SDNGTTFLRSFKILQSLEICGGGLTDAGVKNIREIVSLTQLNLSQNCNLT-----DKTLE 516
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
+++ + A LR+LN+SN+R ++ G+ L L NL L+L ++
Sbjct: 517 LISGMTA-LRSLNVSNSRITNEGLRYLK-PLKNLRTLTLESCKV 558
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK L LS + ++G++H+ + LE L LS T +T G+ LS L L L+L
Sbjct: 376 LTLLKSLVLSD-TDIGNSGLRHISGLKKLEDLNLSFTTVTDHGLKRLSGLTQLKSLNLDA 434
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
+TD L +L L+ L LDL+G+++S+ G L+ F L L + G+T +
Sbjct: 435 RQITDAGLANLTSLSGLIALDLFGARISDNGTTFLRSFKILQSLEICGGGLTDAGVKNIR 494
Query: 116 NISSLECLNLS-NCTI-DSILEGNENKAPLAKISLAGTTFINEREAFL 161
I SL LNLS NC + D LE L ++++ + NE +L
Sbjct: 495 EIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRITNEGLRYL 542
>gi|301098037|ref|XP_002898112.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105473|gb|EEY63525.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 45/377 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA-LLSSLQNLSVLDLGGL 61
LK L L C ++TD G+K L ++ LEKL L LT D + S L LD+
Sbjct: 278 LKSLQLVGCRRLTDKGVKRLFKLTKLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNC 337
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTG-VTKLP-NIS 118
+++ ++ + + LE L + G Q +S+ G A L L + + G + +P +
Sbjct: 338 RLSERAMQHIGQVKSLEVLVIRGCQDISDVGMASLAELTNLKYFDARHCGKIHSIPTEWT 397
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L L G T E +A + + L L++ +
Sbjct: 398 QLEVL------------------------LLGYTAFAESDAAVLQYLTKLQELELRKCRI 433
Query: 179 SR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ F F++++K LE L+++ + + D + + NL+ LN+SNT S +G L
Sbjct: 434 MKRGFQFISRLKHLERLEVAETALTDSRLLEICNNAINLKALNVSNTEISDSGTTGLT-K 492
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTA- 293
L L IL L + I + A++ +S +P L+ +D+ +I G + + L++
Sbjct: 493 LKELRILGLDTSGITNRALANLSFLPQLERLDLFGANITDNGLMHLIPLHKLQELAICGG 552
Query: 294 ---------LQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
+ L L LNL Q + + +LF L + L L+L N ++ +SL LS
Sbjct: 553 NIGDRGVGLISKLTSLTSLNLSQNRNIRTKSLFYLRSLTSLRCLNLSNTGISALSLRHLS 612
Query: 344 SLSKLTNLSIRDAVLTN 360
L +L +LS+ L+
Sbjct: 613 PLKELQSLSVYGCSLSQ 629
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 165/390 (42%), Gaps = 50/390 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLG 59
+K +D+S C+ + G + ++ L +L ++ TGL+ + I +L L+ L+L
Sbjct: 200 VKSIDVSGCIHLQQLGSEWGRHVNRLPELLVASFQGCTGLSKETIEMLKLSTKLTTLNLS 259
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
G V D ++SL+ L L+ L L G + L GV +L ++
Sbjct: 260 GCANVDDKCVKSLRQLEHLKSLQLVGCR------------------RLTDKGVKRLFKLT 301
Query: 119 SLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL----- 171
LE L L C D G + P + ++ER + L L
Sbjct: 302 KLEKLRLGRCRKLTDDAFGGFVDSFPKLRELDVSNCRLSERAMQHIGQVKSLEVLVIRGC 361
Query: 172 -DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
D+S+ ++ LT +K + + G + + L L L T F+ +
Sbjct: 362 QDISDVGMASLAELTNLKYFD-----ARHCG--KIHSIPTEWTQLEVLLLGYTAFAESDA 414
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
+L +L L+ L L +I ++S + L+ ++++ T A TD L
Sbjct: 415 AVLQ-YLTKLQELELRKCRIMKRGFQFISRLKHLERLEVAET----------ALTDSRL- 462
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L N +L+ LN+ T++SD+ L+ KEL L L + +T+ +L LS L +L
Sbjct: 463 LEICNNAINLKALNVSNTEISDSGTTGLTKLKELRILGLDTSGITNRALANLSFLPQLER 522
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
L + A +T++GL P L+ L + GG
Sbjct: 523 LDLFGANITDNGLMHLIPLHKLQELAICGG 552
>gi|46446910|ref|YP_008275.1| hypothetical protein pc1276 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400551|emb|CAF24000.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 667
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 201/397 (50%), Gaps = 40/397 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
LK L L C K+TDAG+ HL S+ L+ L L+ LT G+A L+SL L L+L
Sbjct: 285 LKALHLQECDKLTDAGLAHLASLMALQHLNLNGCWELTDAGLAHLASLMALQHLNLAKCH 344
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L L L++LDL + +++ G L+ L+ LNLA G+ L
Sbjct: 345 KITDAGLAHLTSLVALQHLDLSCCRNLTDAGLTHLRPLVALTHLNLAKCHKITDAGLAHL 404
Query: 115 PNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGT-TFINEREAFLYIETSLLSFL 171
++ +L+ L+LS C D+ L L + L+ + F N A L TSL++
Sbjct: 405 TSLVALQHLDLSYCEKLTDAGLAHLTPLVALQHLDLSYSHHFTNAGLAHL---TSLVALQ 461
Query: 172 DVSNSSLSRF-----CFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-R 224
++ +S +F LT + AL+HLDLS + D + +A + A L++L+LS +
Sbjct: 462 HLNLNSCYKFTDAGLAHLTSLVALQHLDLSCCRNLTDAGLAHLAPLVA-LQHLDLSYSHH 520
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
F++AG+ L L L+ L LS + + D +++++ + +L+ +D+S+ + G
Sbjct: 521 FTNAGLAHLTS-LVALQHLDLSCCRNLTDAGLAHLTSLVALQHLDLSSCKK---LTDAGL 576
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 342
E LT L L HL+ + + +++DA L L+ L HL L + LTD L L
Sbjct: 577 E-----HLTPLVALQHLDLSSCK--KLTDAGLAHLAPLVALQHLDLSSCKKLTDAGLAHL 629
Query: 343 SSLSKLTNLSIRDA-VLTNSGLGSFK---PPRSLKLL 375
+ L L +L++ LT++G+ FK P LK++
Sbjct: 630 APLVALQHLNLNWCDKLTDAGVAHFKSSVAPLHLKII 666
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ LDLS C K+TDAG++HL + L+ L LS LT G+A L+ L L LDL
Sbjct: 557 LVALQHLDLSSCKKLTDAGLEHLTPLVALQHLDLSSCKKLTDAGLAHLAPLVALQHLDLS 616
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLK 96
+TD L L L L++L+L W ++++ G A K
Sbjct: 617 SCKKLTDAGLAHLAPLVALQHLNLNWCDKLTDAGVAHFK 655
>gi|357478391|ref|XP_003609481.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355510536|gb|AES91678.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 576
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 174/380 (45%), Gaps = 64/380 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C VTD+ MK + L++L +S + +T GI+ L LQ LS L++ G +
Sbjct: 230 LESLNIGCCKCVTDSDMKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSI 289
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T + L L L+L +S+ G L L+LA+ +T L ++
Sbjct: 290 TAACFEYISALAALACLNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLT 349
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE LNL +C I G+E L ++L +++ +LS +V NS +
Sbjct: 350 KLEYLNLDSCQI-----GDEGLVNLTGLTL--------------LKSLVLSDTEVGNSGI 390
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+++ + LE L+LS + + D+ ++ + + NL++LNL + + AG+ L L
Sbjct: 391 R---YISGLNKLEDLNLSFTSVTDNGLKRLLGL-TNLKSLNLDARQITDAGLANLT-SLS 445
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D +Y+ +L+ ++I G + G + ++ +
Sbjct: 446 GLITLDLFGARITDSGTTYLRSFKNLQSLEICG----GLLTDAGVKN--------IREIV 493
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L +LNL Q N LTD +L +S ++ L +L++ ++ +
Sbjct: 494 SLTQLNLSQ-----------------------NCKLTDKTLELISGMTALRSLNVSNSRV 530
Query: 359 TNSGLGSFKPPRSLKLLDLH 378
TN GL KP ++L+ L L
Sbjct: 531 TNEGLRYLKPLKNLRTLSLE 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 55/398 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
L+ L L+ C + ++ G+KHL +S L L + ++ +T DG+ S+L NL LDL
Sbjct: 156 LQALTLNYCDQFSEHGLKHLSGLSNLTSLSIRKSCAVTPDGMRAFSNLVNLEKLDLERCS 215
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
+ L KLE L++ + V++ + F L L ++ + G++ L
Sbjct: 216 DIHGGFVHFKGLKKLESLNIGCCKCVTDSDMKAISGFINLKELQISNSSITDLGISYLRG 275
Query: 117 ISSLECLNLSNCTIDSIL------EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+ L LN+ C+I + L + L+ F + ++ L+F
Sbjct: 276 LQKLSTLNVEGCSITAACFEYISALAALACLNLNRCGLSDDGF-EKFSGLTGLKRLSLAF 334
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
++++ L LT+ LE+L+L S IGD+ + NL L L
Sbjct: 335 NKITDACLVHLKGLTK---LEYLNLDSCQIGDEGL-------VNLTGLTL---------- 374
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
L+ L LS T++ + I Y+S + L+ +++S T + TD
Sbjct: 375 ---------LKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSV----------TDN--G 413
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L L +L+ LNL+ Q++DA L L++ LI L L A +TD L S L +
Sbjct: 414 LKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQS 473
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
L I +LT++G+ + + SL L+L LT+ +
Sbjct: 474 LEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 511
>gi|326497793|dbj|BAJ98524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 583
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 174/364 (47%), Gaps = 46/364 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C +TD+ +K+L ++ L++L LS +T G++ L+ L L+ L+L PV
Sbjct: 237 LESLNMRYCNYITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLTGLSKLTHLNLESCPV 296
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L ++ L L L+L + + G + +L LNL + +T L +
Sbjct: 297 TAACLEAISGLASLMLLNLNRCGIYDEGCESFEDLKKLKVLNLGFNHITDACLVHLKGLI 356
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C I G+E L + L + L++S++++
Sbjct: 357 NLESLNLDSCKI-----GDEGLLHLKGLVLLKS-------------------LELSDTAI 392
Query: 179 SR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L+ ++ L ++LS +++ D ++ ++ + + L+++NL N + G+ L G
Sbjct: 393 GSNGLQHLSGLRNLHSINLSFTLVTDTGMKKISTLNS-LKSVNLDNRLITDVGLAALIG- 450
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L L L G ++ D+ S++ +L+ +++ G I G + +++
Sbjct: 451 LTGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCG----GSITDAGVKN--------IKD 498
Query: 297 LNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L L LNL Q +++D TL +S L+ L++ N+ +++ L +L L +L++
Sbjct: 499 LKALTLLNLSQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTLDS 558
Query: 356 AVLT 359
+T
Sbjct: 559 CRVT 562
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 192/419 (45%), Gaps = 70/419 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL---- 58
++ L + C +V++ G+ L S L L + G+TA+G+++ + L NL LDL
Sbjct: 163 MQSLSCNYCDRVSEHGIGVLSGFSNLTSLSFKRSDGVTAEGMSVFADLVNLVNLDLECCL 222
Query: 59 ---GGLP------------------VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L+ L L ++++ G + L
Sbjct: 223 KIHGGLVHMKGLRKLESLNMRYCNYITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLTG 282
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L+ LNL VT + ++SL LNL+ C I EG E+ L K+ +
Sbjct: 283 LSKLTHLNLESCPVTAACLEAISGLASLMLLNLNRCGIYD--EGCESFEDLKKLKVLNLG 340
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
F + +A L L + LE L+L S IGD+ + +
Sbjct: 341 FNHITDACLV--------------------HLKGLINLESLNLDSCKIGDEGLLHLK-GL 379
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN- 271
L++L LS+T S G+ L+G L NL ++LS T + D + +S + SLK +++ N
Sbjct: 380 VLLKSLELSDTAIGSNGLQHLSG-LRNLHSINLSFTLVTDTGMKKISTLNSLKSVNLDNR 438
Query: 272 --TDIKGFIQQVGAETDLVLSLTALQNLNH----------LERLNLEQTQVSDATLFPLS 319
TD+ G +G L L + +H LE L + ++DA + +
Sbjct: 439 LITDV-GLAALIGLTGLTHLDLFGARVTDHGTSFLRYFKNLESLEVCGGSITDAGVKNIK 497
Query: 320 TFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
K L L+L +NA LTD +L +S L+ L +L++ ++ ++N+G K ++L+ L L
Sbjct: 498 DLKALTLLNLSQNAKLTDKTLELISGLTALVSLNVSNSRVSNAGFRHLKALQNLRSLTL 556
>gi|46447144|ref|YP_008509.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400785|emb|CAF24234.1| hypothetical protein pc1510 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 670
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 186/395 (47%), Gaps = 59/395 (14%)
Query: 2 TC--LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDL 58
TC LK L L +C +TDAG+ HL + L+ L LS+ LT G+ L+ L L+ L L
Sbjct: 289 TCKNLKVLYLKKCCNLTDAGLPHLTPLVALQYLDLSKCHNLTDAGLTHLTFLDALNYLGL 348
Query: 59 G-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
G +TD L L+ L L++L+L ++ G A L L +LNL+
Sbjct: 349 GECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLS---------- 398
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+C NL++ A LA + T +N ++ L+ D +N +
Sbjct: 399 ---QCYNLTD-------------AGLAHL----TPLVNLQQ---------LNLSDCTNLT 429
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGH 236
+ +L+ + L+HL+L+ + D + + + NL+ LNLS T + AG+ L+
Sbjct: 430 DTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPL-VNLQQLNLSYCTNLTDAGLAHLST- 487
Query: 237 LPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L+ L L G ++ D +++++ + +LK++++S GA + L AL+
Sbjct: 488 LVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCH-----NLTGAGLAHLTPLVALK 542
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 354
+L+ +LE DA L L+ L +L L LTD L L SL L +L +R
Sbjct: 543 HLDLSWNGDLE-----DAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLVALKHLDLR 597
Query: 355 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT++G+ P +LK LDL G LT+ +
Sbjct: 598 GCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGL 632
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 143/310 (46%), Gaps = 24/310 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-LP 62
L L L C +TD G+ HL S+ L+ L L+ T G+A L+ L L L+L
Sbjct: 343 LNYLGLGECYNLTDTGLAHLKSLINLQHLNLNNCNFTDAGLAHLTPLVTLKYLNLSQCYN 402
Query: 63 VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+TD L L L L+ L+L + +++ G A L L LNL G+ L
Sbjct: 403 LTDAGLAHLTPLVNLQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTP 462
Query: 117 ISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ +L+ LNLS CT D+ L L + L G + + L +L++S
Sbjct: 463 LVNLQQLNLSYCTNLTDAGLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLS 522
Query: 175 ---NSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNT-RFSSA 228
N + + LT + AL+HLDLS + +D+ + V L+ L+LS + A
Sbjct: 523 CCHNLTGAGLAHLTPLVALKHLDLSWNGDLEDAGLAHLTPLVA--LKYLDLSECYHLTDA 580
Query: 229 GVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G+ L L L+ L L G Q+ D I++++ + +LK++ D+KG A
Sbjct: 581 GLAHLRS-LVALKHLDLRGCYQLTDAGIAHLTPLVALKYL-----DLKGCPNLTDAGLAH 634
Query: 288 VLSLTALQNL 297
+ SL ALQ+L
Sbjct: 635 LTSLIALQDL 644
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 42/259 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 62
L++L+LS C +TD G+ +L + TL+ L L+ L G+A L+ L NL L+L
Sbjct: 417 LQQLNLSDCTNLTDTGLAYLSPLVTLQHLNLNVCKLIDAGLAHLTPLVNLQQLNLSYCTN 476
Query: 63 VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 115
+TD L L L L++LDL G ++++ G A L L +LNL+ G+ L
Sbjct: 477 LTDAGLAHLSTLVTLQHLDLDGCYKLTDIGLAHLTPLVTLKYLNLSCCHNLTGAGLAHLT 536
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSL------- 167
+ +L+ L+LS G+ A LA ++ L +++ E + + L
Sbjct: 537 PLVALKHLDLS-------WNGDLEDAGLAHLTPLVALKYLDLSECYHLTDAGLAHLRSLV 589
Query: 168 -LSFLDVSNSSLSRFCF---------LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLR 216
L LD+ R C+ LT + AL++LDL + D + + + A L+
Sbjct: 590 ALKHLDL------RGCYQLTDAGIAHLTPLVALKYLDLKGCPNLTDAGLAHLTSLIA-LQ 642
Query: 217 NLNLSNT-RFSSAGVGILA 234
+L L N R + AG+ LA
Sbjct: 643 DLELPNCQRITDAGLAHLA 661
>gi|283780172|ref|YP_003370927.1| hypothetical protein Psta_2397 [Pirellula staleyi DSM 6068]
gi|283438625|gb|ADB17067.1| leucine-rich repeat cysteine-containing subtype [Pirellula staleyi
DSM 6068]
Length = 443
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 40/369 (10%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
V+ +D +KHL + +L +L + G+T G+A L L +L L VTD + L
Sbjct: 81 VEGSDENLKHLKGLPSLTRLEANVRGVTDAGLANLDGHPTLRILVLELSSVTDAGMEHLT 140
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----VTKLPNISSLECLNLSN 127
L LE + L ++++G L L + T + + ++S LE L+L +
Sbjct: 141 KLPALEDIQLKRCDLTSKGYESLAKIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQD 200
Query: 128 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
C +A LA LAG T + + +Y T ++++ + ++
Sbjct: 201 CN-------QVTEAGLA--PLAGMTKL--KSLRIYGPT-------ITDTVMG---YIKDC 239
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLS 246
K L L L S +G D ++++ + + L+ L L + + + +AG L +LEIL L
Sbjct: 240 KNLASLSLEQSAVGVDGMKVIGGL-SKLKELKLYGASNVTDDALAQIAG-LKDLEILELR 297
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
T + +++ M LK +D+S T I G L AL L +LE +NL
Sbjct: 298 STTTTSKGMVHLAGMSKLKLLDLSET---ANIDNAG--------LAALAPLTNLEEINLW 346
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
T V DA L PL+ +L L+L +TD L L LS L L I +T++GL
Sbjct: 347 YTFVDDAGLAPLAGMTKLKRLNLDKCQVTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAEL 406
Query: 367 KPPRSLKLL 375
+ ++LK L
Sbjct: 407 EGLKNLKHL 415
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 221 SNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF 277
+N R + AG+ L GH P L IL L + + D + +++ +P+L+ I + D+ KG+
Sbjct: 102 ANVRGVTDAGLANLDGH-PTLRILVLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGY 160
Query: 278 --------IQQVGA-ETDLVLS-LTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIH 326
++++ A +T+ L A+++++ LE L+L+ QV++A L PL+ +L
Sbjct: 161 ESLAKIKTLRRIRAPQTNFNDDCLAAIKDMSQLELLDLQDCNQVTEAGLAPLAGMTKLKS 220
Query: 327 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
L + ++TD + + L +LS+ + + G+ LK L L+G +T+D
Sbjct: 221 LRIYGPTITDTVMGYIKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDD 280
Query: 387 AILQFCKM 394
A+ Q +
Sbjct: 281 ALAQIAGL 288
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 53/276 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ L+ LDL C +VT+AG+ L ++ L+ L + +T + + +NL+ L L
Sbjct: 190 MSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTITDTVMGYIKDCKNLASLSLEQ 249
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKL 114
V ++ + L+KL+ L L+G S V++ A + L L L T G+ L
Sbjct: 250 SAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKDLEILELRSTTTTSKGMVHL 309
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+S L+ L+LS ET+ ++
Sbjct: 310 AGMSKLKLLDLS-------------------------------------ETA-----NID 327
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
N+ L+ LT LE ++L + + D + +A + L+ LNL + + AG+ L
Sbjct: 328 NAGLAALAPLTN---LEEINLWYTFVDDAGLAPLAGM-TKLKRLNLDKCQVTDAGLVHLK 383
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
G L NLE L + T++ D ++ + + +LK + I+
Sbjct: 384 G-LSNLEFLHIGSTRVTDTGLAELEGLKNLKHLVIT 418
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ LK LDLS + +AG+ L ++ LE++ L T + G+A L+ + L L+L
Sbjct: 312 MSKLKLLDLSETANIDNAGLAALAPLTNLEEINLWYTFVDDAGLAPLAGMTKLKRLNLDK 371
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTK- 113
VTD L L+ L+ LE+L + ++V++ G A L+ L L + + GV K
Sbjct: 372 CQVTDAGLVHLKGLSNLEFLHIGSTRVTDTGLAELEGLKNLKHLVITFCNDISDDGVAKL 431
Query: 114 ---LPNISSLE 121
LP ++ +E
Sbjct: 432 QAALPGLTKIE 442
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
L++S+ + + LT++ ALE + L + E +A + LR + T F+
Sbjct: 125 VLELSSVTDAGMEHLTKLPALEDIQLKRCDLTSKGYESLAKI-KTLRRIRAPQTNFNDDC 183
Query: 230 VGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
+ + + LE+L L Q+ + ++ ++ M LK + I I TD V
Sbjct: 184 LAAIK-DMSQLELLDLQDCNQVTEAGLAPLAGMTKLKSLRIYGPTI----------TDTV 232
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 347
+ +++ +L L+LEQ+ V + + +L L L AS +TD +L Q++ L
Sbjct: 233 MGY--IKDCKNLASLSLEQSAVGVDGMKVIGGLSKLKELKLYGASNVTDDALAQIAGLKD 290
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L L +R T+ G+ LKLLDL
Sbjct: 291 LEILELRSTTTTSKGMVHLAGMSKLKLLDL 320
>gi|46447588|ref|YP_008953.1| hypothetical protein pc1954 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401229|emb|CAF24678.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 704
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 192/388 (49%), Gaps = 46/388 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGG-L 61
LK L L+ C +TD G+ HL ++ L+ L + LT DG+A L+SL L L+L G
Sbjct: 221 LKVLHLNACQAITDDGLAHLTPLTGLQHLDIRVCEYLTDDGLAYLTSLTGLQHLNLSGCY 280
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L LT L++LDL + ++ G A LK L L+L++ G++ L
Sbjct: 281 HLTDTGLAHLTPLTGLQHLDLRICEYLTATGLAHLKPLKALQHLDLSYCKNLTNVGLSHL 340
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+++L+ L+LS C +++ AG ++ +++ S + ++
Sbjct: 341 APLTALQHLDLSYC---------------WQLADAGLVYLTPLTGLQHLDLS--GYHKLT 383
Query: 175 NSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGI 232
++ L+ LT + AL+ LDLS + D + + + A L++LNL N R + G+
Sbjct: 384 DAGLAH---LTPLTALQCLDLSYCENLTDVGLAHLMPLKA-LQHLNLRNCRNLTDDGLAH 439
Query: 233 LAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
LA L L+ L LS Q+ D +++++ + L+ +D+S + + VG ++ L
Sbjct: 440 LAP-LTALQHLDLSYCWQLTDAGLAHLTPLTGLQRLDLSYCE---NLTDVGLAH--LIPL 493
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTN 350
ALQ+LN NL +D L L+ L HL L + +LTD L L+ L+ L +
Sbjct: 494 KALQHLNLRNCRNL-----TDDGLVHLAPLTALQHLDLSDCNNLTDAGLAHLTPLTALQH 548
Query: 351 LSIRDAV-LTNSGLGSFKPPRSLKLLDL 377
L ++ + LT +GL L+ LDL
Sbjct: 549 LDLKYCINLTGAGLAHLAFLTGLQYLDL 576
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 190/413 (46%), Gaps = 62/413 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG 59
+ L+ LDLS C +T+ G+ HL ++ L+ L LS AD G+ L+ L L LDL
Sbjct: 318 LKALQHLDLSYCKNLTNVGLSHLAPLTALQHLDLSYCWQLADAGLVYLTPLTGLQHLDLS 377
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GV 111
G +TD L L LT L+ LDL + +++ G A L L LNL G+
Sbjct: 378 GYHKLTDAGLAHLTPLTALQCLDLSYCENLTDVGLAHLMPLKALQHLNLRNCRNLTDDGL 437
Query: 112 TKLPNISSLECLNLSNC--TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
L +++L+ L+LS C D+ G + PL + +R Y E +
Sbjct: 438 AHLAPLTALQHLDLSYCWQLTDA---GLAHLTPLTGL---------QRLDLSYCE----N 481
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSN-TRFSS 227
DV L +KAL+HL+L + + DD + +A + A L++L+LS+ +
Sbjct: 482 LTDVG------LAHLIPLKALQHLNLRNCRNLTDDGLVHLAPLTA-LQHLDLSDCNNLTD 534
Query: 228 AGVGILA-----GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
AG+ L HL ++L+G +++++ + L+++D+S K I
Sbjct: 535 AGLAHLTPLTALQHLDLKYCINLTGA-----GLAHLAFLTGLQYLDLSW--CKNLIDAGL 587
Query: 283 AETDLVLSLTALQ--NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSL 339
L LTALQ L++ E L +D L L + L HL+L +LTD L
Sbjct: 588 VHLKL---LTALQYLGLSYCENL-------TDDGLAHLRSLTALQHLALIHYKNLTDAGL 637
Query: 340 HQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
L SL+ L +L +R LT GL + +L+ L L LT+D + +F
Sbjct: 638 VHLRSLTSLQHLDLRYCQNLTGDGLAHLRTLTALQYLALTQYKNLTDDGLARF 690
>gi|290997932|ref|XP_002681535.1| predicted protein [Naegleria gruberi]
gi|284095159|gb|EFC48791.1| predicted protein [Naegleria gruberi]
Length = 448
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 173/381 (45%), Gaps = 40/381 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK LD+ ++ D G K + + L L + + + A+G +S ++ L+ LD+GG
Sbjct: 1 MKQLKLLDIGEN-QIGDEGAKSISEMKQLTSLDICYSRIGAEGAKFISEMKQLTSLDIGG 59
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL--NLAWTGVTKLPNIS 118
+ D + + + +L L++ +++ + GA + +L+ L N GV +IS
Sbjct: 60 NEIGDEGSKYISEMKQLTSLNIDNNRIGDEGAKSISEMKQLTSLSINNNEIGVEGAKSIS 119
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
++ L ++D + GN I G FI+E + L LD+ + +
Sbjct: 120 EMKQL----TSLD--ISGN-------GIGDKGVKFISEMKQ--------LKLLDIGGNEI 158
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
++++MK L L++ + IGD+ V+ ++ + L +L++ N R G ++
Sbjct: 159 GDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEM-KQLTSLSIYNNRIGDEGAKSIS-E 216
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L L +SG I D + +S M L +DIS I G E +S
Sbjct: 217 MKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGI-------GDEGAKFIS-----E 264
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L+ L++ ++ D +S K+L L++ N + + +S + +LT+L I +
Sbjct: 265 MKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNN 324
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+ G+ S + LK L++
Sbjct: 325 QIGVEGVKSISEMKQLKSLNI 345
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 155/364 (42%), Gaps = 79/364 (21%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G K + + L L ++ + +G +S ++ L+ LD+ G + D ++ +
Sbjct: 85 RIGDEGAKSISEMKQLTSLSINNNEIGVEGAKSISEMKQLTSLDISGNGIGDKGVKFISE 144
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
+ +L+ LD+ G+++ + G+ + +L+ LN+ GV + + L L++ N
Sbjct: 145 MKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIGENRIGDEGVKSISEMKQLTSLSIYNN 204
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQ 186
I G+E ++ E L+ LD+S + + +++
Sbjct: 205 RI-----GDEGAKSIS-------------------EMKQLTSLDISGNGIGDKGVKSISE 240
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
MK L LD+S + IGD+ + ++ + L++L +
Sbjct: 241 MKQLTSLDISGNGIGDEGAKFIS--------------------------EMKQLKLLDIG 274
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDI--KG---------------FIQQVGAETDLVL 289
G +I D Y+S M L ++I N +I +G + Q+G E
Sbjct: 275 GNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYNNQIGVE----- 329
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+ ++ + L+ LN+ ++ D + +S K+LI L++ + D + +S + +LT
Sbjct: 330 GVKSISEMKQLKSLNICYNEIGDKGVKFISEMKQLISLNIGGNGIGDEGVKSISEMKQLT 389
Query: 350 NLSI 353
+L+I
Sbjct: 390 SLNI 393
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 59/316 (18%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
+ +L+ LD+ +Q+ + GA + +L+ L++ ++
Sbjct: 1 MKQLKLLDIGENQIGDEGAKSISEMKQLTSLDICYS------------------------ 36
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALE 191
+I G FI+E + L+ LD+ + + ++++MK L
Sbjct: 37 -----------RIGAEGAKFISEMKQ--------LTSLDIGGNEIGDEGSKYISEMKQLT 77
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
L++ ++ IGD+ + ++ + L +L+++N G ++ + L L +SG I
Sbjct: 78 SLNIDNNRIGDEGAKSISEM-KQLTSLSINNNEIGVEGAKSIS-EMKQLTSLDISGNGIG 135
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D + ++S M LK +DI +I G E +S + L LN+ + ++
Sbjct: 136 DKGVKFISEMKQLKLLDIGGNEI-------GDEGSKYIS-----EMKQLTSLNIGENRIG 183
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
D + +S K+L LS+ N + D +S + +LT+L I + + G+ S +
Sbjct: 184 DEGVKSISEMKQLTSLSIYNNRIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQ 243
Query: 372 LKLLDLHGGWLLTEDA 387
L LD+ G + E A
Sbjct: 244 LTSLDISGNGIGDEGA 259
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 119/263 (45%), Gaps = 29/263 (11%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G K + + L L +S G+ G+ +S ++ L+ LD+ G + D + +
Sbjct: 205 RIGDEGAKSISEMKQLTSLDISGNGIGDKGVKSISEMKQLTSLDISGNGIGDEGAKFISE 264
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNC 128
+ +L+ LD+ G+++ + G+ + +L+ LN + GV + + L L + N
Sbjct: 265 MKQLKLLDIGGNEIGDEGSKYISEMKQLTSLNIYNNEIGVEGVKSISEMKQLTSLYIYN- 323
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+I + G I+E + + + + ++ + + F+++MK
Sbjct: 324 ---------------NQIGVEGVKSISEMKQLKSLN---ICYNEIGDKGVK---FISEMK 362
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L L++ + IGD+ V+ ++ + L +LN+S R + G ++ + L L +
Sbjct: 363 QLISLNIGGNGIGDEGVKSISEM-KQLTSLNISKNRIGAEGSKFIS-EMKQLTSLDICYN 420
Query: 249 QIDDYAISYMSMMPSLKFIDISN 271
+I + +S M LK + I N
Sbjct: 421 EIGGEGVKSISEMKQLKSLSIHN 443
>gi|168705463|ref|ZP_02737740.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 362
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 166/374 (44%), Gaps = 67/374 (17%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R VTDA +K L ++ L L LS T +T G+ L+ L L+ L+LGG +TD
Sbjct: 51 RGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTKITDAGPTE 110
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
L L L L+L +QV++ G + L L+L+ TGVT + L L L+
Sbjct: 111 LAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTN----AGLGHLTLTK--- 163
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ +SL GT + I +S LD+S ++L+ + L
Sbjct: 164 ------------MRSLSLRGTKITD--GGLREIRIMSVSGLDLSGTALTD-------EGL 202
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
+ L L + G L+LS+T+ +S G+ LA P L+ LSLS T++
Sbjct: 203 KDLGLFEEITG----------------LDLSDTKVTSNGLKELASQ-PTLKFLSLSRTKV 245
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN---LEQ 307
D + +++ + L+ + ++ T + G T ++ L LERL L
Sbjct: 246 GDAGLKHLAPLKRLESLYLNGTGVTG---------------TGVKELAPLERLRILELTG 290
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
T V+ L LST L L L +A++TD L ++ L L L + +T +G+ +
Sbjct: 291 TMVTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLYRTKVTGAGVAELR 350
Query: 368 PPRSLKLLDLHGGW 381
++L D+ GW
Sbjct: 351 --KALPRCDI--GW 360
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 156/350 (44%), Gaps = 45/350 (12%)
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKL 114
G VTD L++L LT L LDL + V++ G L +L+ LNL T G T+L
Sbjct: 52 GKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLGGTKITDAGPTEL 111
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++ L LNLS+ +++ AG + + ++ LS V+
Sbjct: 112 APLAVLTDLNLSST----------------QVTDAGLKEVARLRTLVALD---LSHTGVT 152
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
N+ L LT+M++L L + I D + + + ++ L+LS T + G+ L
Sbjct: 153 NAGLGHLT-LTKMRSLS---LRGTKITDGGLREIRIM--SVSGLDLSGTALTDEGLKDL- 205
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G + L LS T++ + ++ P+LKF+ +S T +VG L L
Sbjct: 206 GLFEEITGLDLSDTKVTSNGLKELASQPTLKFLSLSRT-------KVGDA-----GLKHL 253
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L LE L L T V+ + L+ + L L L +T L LS+L +L L +
Sbjct: 254 APLKRLESLYLNGTGVTGTGVKELAPLERLRILELTGTMVTGGGLKHLSTLPRLAILRLS 313
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV-WHE 403
DA +T+ GL ++L LDL+ +T + + K PR ++ W E
Sbjct: 314 DAAVTDEGLKDIAHLKTLLALDLY-RTKVTGAGVAELRKALPRCDIGWKE 362
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
LK L LSR KV DAG+KHL + LE L+L+ TG+T G+ L+ L+ L +L+L G
Sbjct: 234 TLKFLSLSRT-KVGDAGLKHLAPLKRLESLYLNGTGVTGTGVKELAPLERLRILELTGTM 292
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
VT L+ L L +L L L + V++ G + L L+L T VT
Sbjct: 293 VTGGGLKHLSTLPRLAILRLSDAAVTDEGLKDIAHLKTLLALDLYRTKVT 342
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 72/325 (22%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L L+L K+TDAG L ++ L L LS T +T G+ ++ L+ L LDL
Sbjct: 90 LTKLTALNLG-GTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSH 148
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
VT+ L L LTK+ L L G+++++ G +++ ++S L
Sbjct: 149 TGVTNAGLGHL-TLTKMRSLSLRGTKITDGGLREIRIM-----------------SVSGL 190
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE--REAFLYIETSLLSFLDVSNSSL 178
+ L+GT +E ++ L+ E ++ LD+S++ +
Sbjct: 191 D--------------------------LSGTALTDEGLKDLGLFEE---ITGLDLSDTKV 221
Query: 179 SRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ L L+ L LS + +GD ++ +A + L +L L+ T + GV LA
Sbjct: 222 TSNGLKELASQPTLKFLSLSRTKVGDAGLKHLAPL-KRLESLYLNGTGVTGTGVKELA-P 279
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L IL L+GT + + ++S +P L + +S+ A TD L++
Sbjct: 280 LERLRILELTGTMVTGGGLKHLSTLPRLAILRLSDA----------AVTD-----EGLKD 324
Query: 297 LNHLE---RLNLEQTQVSDATLFPL 318
+ HL+ L+L +T+V+ A + L
Sbjct: 325 IAHLKTLLALDLYRTKVTGAGVAEL 349
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 273 DIKGFIQQV--GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
D KG + V +T L AL L L L+L T V+DA L L+ +L L+L
Sbjct: 40 DPKGVVTHVMLRGKTVTDADLKALAPLTGLTDLDLSSTPVTDAGLKHLAPLTKLTALNLG 99
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+TD +L+ L+ LT+L++ +T++GL R+L LDL
Sbjct: 100 GTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDL 146
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 245 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
L G + D + ++ + L +D+S+T + TD L L L L LN
Sbjct: 50 LRGKTVTDADLKALAPLTGLTDLDLSSTPV----------TDA--GLKHLAPLTKLTALN 97
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
L T+++DA L+ L L+L + +TD L +++ L L L + +TN+GLG
Sbjct: 98 LGGTKITDAGPTELAPLAVLTDLNLSSTQVTDAGLKEVARLRTLVALDLSHTGVTNAGLG 157
Query: 365 SF 366
Sbjct: 158 HL 159
>gi|70663921|emb|CAE02935.3| OSJNBa0014K14.7 [Oryza sativa Japonica Group]
Length = 557
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 162/358 (45%), Gaps = 44/358 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L+L C +TD+ MKHL ++ L +L LS ++ G++ L L L+ L+L G V
Sbjct: 235 LEKLNLRYCNGITDSDMKHLSDLTNLRELQLSCCKISDLGVSYLRGLSKLAHLNLEGCAV 294
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + L L L+L V + G L+ +L LNL + +T L +
Sbjct: 295 TAACLEVISGLASLVLLNLSRCGVYDEGCEHLEGLVKLKVLNLGFNYITDACLVHLKELI 354
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LECLNL +C I G+E LA + + T E ++TS L
Sbjct: 355 NLECLNLDSCKI-----GDEG---LAHLKVFHKTLKAENHTISLMQTS-------ETKKL 399
Query: 179 SRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
F + ++ E SS M+ S + L +L+L R + AG L +
Sbjct: 400 GTF----RHRSWEQWTSSSLWMVFLSSQGLTG-----LTHLDLFGARITDAGTNCLK-YF 449
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
NL+ L + G I D + + + +L +++S Q G TD L L + L
Sbjct: 450 KNLQSLEVCGGLITDAGVKNIKDLKALTLLNLS---------QNGNLTDKSLEL--ISRL 498
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL-SIR 354
L LN+ ++VS++ L L + L LSL + +T + + +L L+ L NL S+R
Sbjct: 499 TALVSLNVSNSRVSNSGLHHLKPLQNLRSLSLESCKVTAIEIKKL-QLAALPNLVSVR 555
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 167/382 (43%), Gaps = 64/382 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
M L LDL RC K+ G+ HL + LEKL L G+T + LS L NL L L
Sbjct: 208 MVNLGSLDLERCPKI-HGGLVHLKGLRKLEKLNLRYCNGITDSDMKHLSDLTNLRELQLS 266
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++DL + L+ L+KL +L+L G V+ AA L++ + ++S
Sbjct: 267 CCKISDLGVSYLRGLSKLAHLNLEGCAVT---AACLEV----------------ISGLAS 307
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L LNLS C + EG E+ L K+ + F YI + L L
Sbjct: 308 LVLLNLSRCGVYD--EGCEHLEGLVKLKVLNL-------GFNYITDACLVHL-------- 350
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
++ LE L+L S IGD+ + + L+ N + + ++ L
Sbjct: 351 -----KELINLECLNLDSCKIGDEGLAHLKVFHKTLKAENHTISLMQTSETKKLG----- 400
Query: 240 LEILSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGF-IQQVGAETDLVLSLTALQN 296
+ + + S +M + S +++ D+ G I G L+
Sbjct: 401 ----TFRHRSWEQWTSSSLWMVFLSSQGLTGLTHLDLFGARITDAGT--------NCLKY 448
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRD 355
+L+ L + ++DA + + K L L+L +N +LTD SL +S L+ L +L++ +
Sbjct: 449 FKNLQSLEVCGGLITDAGVKNIKDLKALTLLNLSQNGNLTDKSLELISRLTALVSLNVSN 508
Query: 356 AVLTNSGLGSFKPPRSLKLLDL 377
+ ++NSGL KP ++L+ L L
Sbjct: 509 SRVSNSGLHHLKPLQNLRSLSL 530
>gi|22136662|gb|AAM91650.1| unknown protein [Arabidopsis thaliana]
Length = 192
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 63/77 (81%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ELDLSRC KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGG
Sbjct: 110 LTSLTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGG 169
Query: 61 LPVTDLVLRSLQVLTKL 77
LPVTD L SLQVL L
Sbjct: 170 LPVTDQNLISLQVLPVL 186
>gi|8927653|gb|AAF82144.1|AC034256_8 Contains similarity to F-box protein FBL2 from Homo sapiens
gb|AF176518 and contains multiple Leucine Rich PF|00560
repeats. ESTs gb|Z34572, gb|Z34571, gb|AI100681,
gb|AI100675, gb|AA395320, gb|AI100674, gb|AA651378,
gb|AA007067, gb|T46145, gb|T22090, gb|AI995016,
gb|H36884, gb|AI995066, gb|H37061, gb|T43537 come from
this gene [Arabidopsis thaliana]
Length = 568
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 49/368 (13%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGG 60
T L+ L+ + C ++++ G+ HL +S L L + +TA G+ LS+L NL LDL
Sbjct: 162 TNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEK 221
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
P D L L+ LTKLE L++ W + +++ M P +G+ KL ++
Sbjct: 222 CPGIDGGLVHLRALTKLESLNIKWCNCITDA-----DMEP--------LSGLNKLNLLNL 268
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
C +++ +D++ + P A LAG ++N L+ + S+S
Sbjct: 269 EGCRHVTAACLDTLT--GLYRHPHA---LAGLMYLN------------LNRCNFSDSGCE 311
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
+F L +K L +L + I + + + + L +LNL + R G+ L+G L
Sbjct: 312 KFSDLINLKIL---NLGMNNITNSCLVHLKGL-TKLESLNLDSCRIGDEGLVHLSGMLE- 366
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ L LS T++ + ++S + +L+ I++S T + G L L L
Sbjct: 367 LKSLELSDTEVGSNGLRHLSGLSNLESINLSFT----VVTDSG--------LRKLSGLTS 414
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L LNL+ V+DA L L++ L HL L A +TD + L +L KL +L I LT
Sbjct: 415 LRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLT 474
Query: 360 NSGLGSFK 367
++G+ + K
Sbjct: 475 DTGVKNIK 482
>gi|4454052|emb|CAA23049.1| hypothetical protein [Arabidopsis thaliana]
gi|7269232|emb|CAB81301.1| hypothetical protein [Arabidopsis thaliana]
Length = 227
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 63/77 (81%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ELDLSRC KVTDAGMKHL S+ L+KLW+S+TG+T GI+LL+SL+ LS+LDLGG
Sbjct: 145 LTSLTELDLSRCFKVTDAGMKHLQSVVNLKKLWISQTGVTEVGISLLASLKKLSLLDLGG 204
Query: 61 LPVTDLVLRSLQVLTKL 77
LPVTD L SLQVL L
Sbjct: 205 LPVTDQNLISLQVLPVL 221
>gi|149175887|ref|ZP_01854505.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148845334|gb|EDL59679.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 360
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 29/263 (11%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
D+ + L LE++ LS GL+ G+ L L L L V+D L L+ L++
Sbjct: 102 DSDLVWLNDFPNLERISLSGKGLSNTGLVHLKRFHRLKRLMLWNTSVSDDGLVHLKELSQ 161
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTID 131
L +LDL+ + VS G A L+ L++LNL T VT ++ S+L LNL+ +
Sbjct: 162 LNHLDLFYTPVSGSGLAHLQGLTNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTS-- 219
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
IS AG + + + ++ L V+ + LS L ++ L+
Sbjct: 220 --------------ISDAGLVHLRDLPQLIILQ---LEQTQVTGTGLSELSSLPKLYCLK 262
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
L+ S+I D S+ + +R L L +T+ S AG+ L+G LP L+ L+LSGTQ+
Sbjct: 263 ---LNGSLINDSSMSHLKSFKTLIR-LELQDTQISDAGLVHLSG-LPLLDALNLSGTQVT 317
Query: 252 DYAISYMSMMPSLKFIDISNTDI 274
D + Y+ +P LK + + NT +
Sbjct: 318 DAGLVYLQGLPRLKNVYLKNTQV 340
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L + VS S L+ LT L L+L + + + ++ V C A LR LNL+ T S
Sbjct: 167 LFYTPVSGSGLAHLQGLTN---LTWLNLQGTAVTNAGLKQVNCFSA-LRVLNLNQTSISD 222
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
AG+ L LP L IL L TQ+ +S +S +P L + ++ + I
Sbjct: 223 AGLVHLRD-LPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDS---------- 271
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
S++ L++ L RL L+ TQ+SDA L LS L L+L +TD L L L +
Sbjct: 272 --SMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQGLPR 329
Query: 348 LTNLSIRDAVLTNSGLGSFK 367
L N+ +++ +T+ GL K
Sbjct: 330 LKNVYLKNTQVTSEGLEQRK 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 29/279 (10%)
Query: 160 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
F +E LS +SN+ L L + L+ L L ++ + DD + + + + L +L+
Sbjct: 111 FPNLERISLSGKGLSNTGL---VHLKRFHRLKRLMLWNTSVSDDGLVHLKEL-SQLNHLD 166
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
L T S +G+ L G L NL L+L GT + + + ++ +L+ ++++ T I
Sbjct: 167 LFYTPVSGSGLAHLQG-LTNLTWLNLQGTAVTNAGLKQVNCFSALRVLNLNQTSISD--- 222
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
L L++L L L LEQTQV+ L LS+ +L L L + + D S+
Sbjct: 223 ---------AGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNGSLINDSSM 273
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
L S L L ++D ++++GL L L+L G + DA L + + PR++
Sbjct: 274 SHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQV--TDAGLVYLQGLPRLK 331
Query: 400 VWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMP 438
+V + Q+ S G R +++Q +DP+P
Sbjct: 332 -----NVYLKNTQVTSEGLEQ-----RKLILQQSRDPLP 360
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 25/136 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L+ L+L++ ++DAG+ HL + L L L +T +T G++ LSSL L L L G
Sbjct: 207 FSALRVLNLNQT-SISDAGLVHLRDLPQLIILQLEQTQVTGTGLSELSSLPKLYCLKLNG 265
Query: 61 LPVTDLV---LRSLQVLTKLEY---------------------LDLWGSQVSNRGAAVLK 96
+ D L+S + L +LE L+L G+QV++ G L+
Sbjct: 266 SLINDSSMSHLKSFKTLIRLELQDTQISDAGLVHLSGLPLLDALNLSGTQVTDAGLVYLQ 325
Query: 97 MFPRLSFLNLAWTGVT 112
PRL + L T VT
Sbjct: 326 GLPRLKNVYLKNTQVT 341
>gi|443729605|gb|ELU15470.1| hypothetical protein CAPTEDRAFT_224593 [Capitella teleta]
Length = 858
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 31/324 (9%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 61
CL L L C +TD G++ + S+ L+ L L+ T LT + + L+ L NL VL L
Sbjct: 499 CLAHLSLKACSLITDRGLQDISSLKRLKVLNLAACTQLTDNCLPLVRELPNLQVLILEST 558
Query: 62 PVTDLVLRSL--QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
V+D ++ L Q LT L LDL +QV++R + K P+LS LNL + V L +
Sbjct: 559 GVSDRGMQELFHQPLTSLVNLDLSKTQVTHRIFNLAKNAPKLSHLNLEQSEVASLSGVKE 618
Query: 120 --LECLNLSNCTI--DSI--LEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLD 172
L+ LNLS+ I DS+ L G + +A ++++ T I Y+++ LL L
Sbjct: 619 LCLQSLNLSHTKIVTDSLLCLSGCDIRA----LNISNTPNIEGDLGLEYLQSLKLLQHLS 674
Query: 173 VSNSSLSR---FCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSA 228
+ + F T M L LDL++ + +GDD + + + +LR L L NT+ +
Sbjct: 675 LPSRLSLSDHGLQFTTAM-PLVLLDLTNYLNVGDDGMRHIGKI-TSLRRLLLCNTKITDG 732
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
G+ L G L NLE +SL T I D + L+ + ++ T I ++
Sbjct: 733 GLLFLRG-LVNLEEISLDRTAITDEGACVVEAFTRLQQLSLTETGI----------SNAF 781
Query: 289 LSLTALQNLNHLERLNLEQTQVSD 312
L +L L +LNL +T +SD
Sbjct: 782 LEHQSLNPCYLLSKLNLSRTAISD 805
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LDL+ + V D GM+H+ I++L +L L T +T G+ L L NL + L +TD
Sbjct: 697 LDLTNYLNVGDDGMRHIGKITSLRRLLLCNTKITDGGLLFLRGLVNLEEISLDRTAITDE 756
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP--RLSFLNLAWTGVTKLPNISSLECLN 124
++ T+L+ L L + +SN + P LS LNL+ T ++ + CL
Sbjct: 757 GACVVEAFTRLQQLSLTETGISNAFLEHQSLNPCYLLSKLNLSRTAISD----KGVRCLR 812
Query: 125 LSNCTI 130
L N T+
Sbjct: 813 LPNLTL 818
>gi|357150116|ref|XP_003575347.1| PREDICTED: F-box/LRR-repeat protein 14-like [Brachypodium
distachyon]
Length = 582
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 42/362 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ +++ C +TD+ +K+L ++ L++L LS +T G++ L L L L+L PV
Sbjct: 236 LESINMRYCNNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRGLSKLIRLNLESCPV 295
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L + L L L+L + + G K +L LNL + +T L +
Sbjct: 296 TAACLVDISGLASLMLLNLNRCGIYDEGCESFKDLKKLKVLNLGFNYITDACLVHLKELI 355
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C K+ AG + +E LS +V ++ L
Sbjct: 356 NLEFLNLDSC----------------KVGDAGLLHLKGLVLLKSLE---LSDTEVGSNGL 396
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
L+ ++ L+ +DLS +++ D ++ ++ + ++L+++NL + + G+ L G L
Sbjct: 397 RH---LSGLRTLQRIDLSFTLVTDTGMKKISAL-SSLKSVNLDSRLITDVGLAALTG-LT 451
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D S +L+ ++ G I VG + ++ L
Sbjct: 452 GLTHLDLFGARITDNGASCFRYFKNLESLEACG----GSITDVGVKN--------IKELK 499
Query: 299 HLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L LNL Q ++D TL +S L+ L++ N+ +++ L L++L L +L++
Sbjct: 500 ALTLLNLSQNANLTDKTLELISGLTALVSLNVSNSRVSNAGLRHLNALQNLRSLTLDSCR 559
Query: 358 LT 359
+T
Sbjct: 560 VT 561
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 171/385 (44%), Gaps = 69/385 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
++ L + C ++++ G+ L S L L + G+TA+G+ + ++L NL LDL
Sbjct: 162 MQSLVCNYCDQISEHGLGVLSGFSNLTSLSFKRSDGVTAEGMRVFANLVNLVNLDLERCL 221
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L L+ L KLE +++ + + +++ L L L L+ GV+ L
Sbjct: 222 KIHGGLVHLKGLRKLESINMRYCNNITDSDIKYLSDLTNLKELQLSSCRITDLGVSYLRG 281
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSN 175
+S L LNL +C + + A L IS LA +N +Y E SF D
Sbjct: 282 LSKLIRLNLESCPVTA--------ACLVDISGLASLMLLNLNRCGIYDE-GCESFKD--- 329
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+K L+ L+L + I D AC+ +
Sbjct: 330 -----------LKKLKVLNLGFNYITD------ACL--------------------VHLK 352
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L NLE L+L ++ D + ++ + LK +++S+T +VG+ L L
Sbjct: 353 ELINLEFLNLDSCKVGDAGLLHLKGLVLLKSLELSDT-------EVGSN-----GLRHLS 400
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L L+R++L T V+D + +S L ++L + +TDV L L+ L+ LT+L +
Sbjct: 401 GLRTLQRIDLSFTLVTDTGMKKISALSSLKSVNLDSRLITDVGLAALTGLTGLTHLDLFG 460
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGG 380
A +T++G F+ ++L+ L+ GG
Sbjct: 461 ARITDNGASCFRYFKNLESLEACGG 485
>gi|297844484|ref|XP_002890123.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335965|gb|EFH66382.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 174/384 (45%), Gaps = 64/384 (16%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGG 60
T L+ L+ + C ++++ G++HL +S L L + +TA G+ LS+L N+ LDL
Sbjct: 155 TNLESLNFNFCDQISNRGLEHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNMKKLDLEK 214
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
P L L+ LTKLE L++ W + +++ L L L + + +T + IS
Sbjct: 215 CPGIHGGLVHLRGLTKLESLNIKWCNCITDADMEPLSELTNLRSLQICCSRITDI-GISY 273
Query: 120 LE------------CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 167
L+ C +++ +D++ +L G F+N
Sbjct: 274 LKGLNKLNLLNLEGCRHVTAACLDTL------------TALTGLMFLN------------ 309
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNT 223
L+ + S+S +F L +K L +G +S+ V L +LNL +
Sbjct: 310 LNRCNFSDSGCEKFSDLINLKILN--------LGMNSITNSCLVHLRGLTKLESLNLDSC 361
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
R G+ L+G L L+ L LS T++ + ++S + +L+ I++S T +
Sbjct: 362 RIGDEGLVHLSGMLE-LKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVV--------- 411
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
TD L L L L LNL+ V+DA L L++ L HL L A +TD + L
Sbjct: 412 -TDS--GLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLR 468
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFK 367
+L KL +L I LT++G+ + K
Sbjct: 469 NLKKLQSLEICGGGLTDTGVKNIK 492
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 172/393 (43%), Gaps = 67/393 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C +TDA M+ L ++ L L + + +T GI+ L L L++L+L G
Sbjct: 228 LTKLESLNIKWCNCITDADMEPLSELTNLRSLQICCSRITDIGISYLKGLNKLNLLNLEG 287
Query: 61 LP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----L 114
VT L +L LT L +L+L S+ G L LNL +T L
Sbjct: 288 CRHVTAACLDTLTALTGLMFLNLNRCNFSDSGCEKFSDLINLKILNLGMNSITNSCLVHL 347
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++ LE LNL +C I G+E
Sbjct: 348 RGLTKLESLNLDSCRI-----GDEG----------------------------------- 367
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L+ M L+ L+LS + +G + + ++ + +NL ++NLS T + +G+ L+
Sbjct: 368 ------LVHLSGMLELKSLELSDTEVGSNGLRHLSGL-SNLESINLSFTVVTDSGLRKLS 420
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G L +L L+L + D +S ++ + L +D+ I G L
Sbjct: 421 G-LTSLRTLNLDARHVTDAGLSALTSLTGLTHLDL----FGARITDSGT--------NHL 467
Query: 295 QNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+NL L+ L + ++D + + + +N++LTD +L +S L+ L +L++
Sbjct: 468 RNLKKLQSLEICGGGLTDTGVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNV 527
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
++ +++SGL KP ++L+ L L L D
Sbjct: 528 SNSRVSSSGLRHLKPLKNLRSLTLESCKLSAND 560
>gi|406835014|ref|ZP_11094608.1| hypothetical protein SpalD1_25335 [Schlesneria paludicola DSM
18645]
Length = 497
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 185/408 (45%), Gaps = 41/408 (10%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
+ ++T A + L + L L T ++ +GI L L+NL+ L L VTD LR+
Sbjct: 111 KSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGLRN 170
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSNC 128
L+ ++KL L L G+ +S+ G L LS L+L + +L IS LE L +
Sbjct: 171 LREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLRLENIDDVQLDEISKLENLKTLSL 230
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ SI + + K +L IN + + L LD+ N
Sbjct: 231 HVPSITDSELKQLRTVK-NLTKLFLINSK----ITDAGLKPLLDLKN------------- 272
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG 247
L LDLSS+ I D ++ + + NL +L L + G L ++ NL+ L+L+
Sbjct: 273 -LTDLDLSSTQITDAGLKEIGQL-ENLTSLYLEGCGGITDVGFRELR-NIKNLKRLALAR 329
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDLV-----------LSLTALQ 295
I D + + + SL+ +D+S T I IQ++G T+L L L +
Sbjct: 330 CGITDLGMKGLGQLKSLELLDLSRTPITDHGIQEIGGLTNLSTLWLLGSNITDLGLREIN 389
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFK--ELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L +L+ L L+ ++DA + L F ++HL ++ +TD L +L L KL+ +
Sbjct: 390 GLENLKELYLKSAFITDAGMKELGKFHNMNMLHL-IQCDGITDAGLKELRDLKKLSMFEL 448
Query: 354 RDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
+T++G+ K + L +L++ G +T + + ++ P ++
Sbjct: 449 YGCRNVTDAGIDELKEHKQLTILNV-GATQVTVSGVNKLKELLPDTQI 495
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L L C +TD G + L +I L++L L+ G+T G+ L L++L +LDL P+
Sbjct: 297 LTSLYLEGCGGITDVGFRELRNIKNLKRLALARCGITDLGMKGLGQLKSLELLDLSRTPI 356
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS--FLNLAW---TGVTKLPNIS 118
TD ++ + LT L L L GS +++ G + L +L A+ G+ +L
Sbjct: 357 TDHGIQEIGGLTNLSTLWLLGSNITDLGLREINGLENLKELYLKSAFITDAGMKELGKFH 416
Query: 119 SLECLNLSNC 128
++ L+L C
Sbjct: 417 NMNMLHLIQC 426
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
HL L + +QI +S +S + +L + NT+I + LQ
Sbjct: 101 HLTTLVFSNFKSSQITSARLSDLSGLKNLTSLHFENTEISNE------------GIHELQ 148
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L +L L+L T V+DA L L +L LSL S++D +L L L++LS+R
Sbjct: 149 ELKNLTTLSLHTTHVTDAGLRNLREVSKLTTLSLSGNSISDDGFKELGELKHLSSLSLRL 208
Query: 356 AVLTNSGLGSFKPPRSLKLLDLH 378
+ + L +LK L LH
Sbjct: 209 ENIDDVQLDEISKLENLKTLSLH 231
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
N + +Q++ A L LS K L L N +++ +H+L L LT LS+ +T++GL
Sbjct: 109 NFKSSQITSARLSDLSGLKNLTSLHFENTEISNEGIHELQELKNLTTLSLHTTHVTDAGL 168
Query: 364 GSFKPPRSLKLLDLHG 379
+ + L L L G
Sbjct: 169 RNLREVSKLTTLSLSG 184
>gi|87309359|ref|ZP_01091495.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
gi|87287998|gb|EAQ79896.1| hypothetical protein DSM3645_22189 [Blastopirellula marina DSM
3645]
Length = 351
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
+DLSR V TD + L TL KL L + G+T + + L+ L L LD+ G+ +T
Sbjct: 55 MDLSRVV-ATDVDFRGLGEAVTLRKLSLQDVGMTDESASELAPLTKLQSLDMRGVSITGE 113
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLE 121
L+SL LT+LE L G + + A L +L L L T G+ L N L+
Sbjct: 114 ALQSLGQLTELERLLFRGQPIRDADLAQLAPLTKLKVLGLDDTDASAGGLEHLQNAHDLK 173
Query: 122 CLNLSNC-TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L L N T+D L LAK+ L G+ DV+ S ++
Sbjct: 174 ELYLFNTPTVDEELAVLTKFPALAKLRLRGS--------------------DVTGSGMAE 213
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L ++ +LE LD+S + + D +A + L +LNL T+ + A + LA L L
Sbjct: 214 ---LAKIGSLEDLDVSETKVDDAGAAEIAKL-PKLTDLNLWKTKVTDASLPDLA-KLTTL 268
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
E L+L + D ++ ++ MP+LK++ + +T +
Sbjct: 269 ERLNLDANDLTDANLALLAAMPNLKWLHLGSTSV 302
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R VT +GM L I +LE L +SET + G A ++ L L+ L+L VTD L
Sbjct: 202 RGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLTDLNLWKTKVTDASLPD 261
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNL 125
L LT LE L+L + +++ A+L P L +L+L T VT +L SLE L +
Sbjct: 262 LAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILELAKSKSLETLIV 321
Query: 126 SNCTI 130
+ +
Sbjct: 322 TRTKV 326
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 200
L K+SL +E + L T L S LD+ S++ L Q+ LE L I
Sbjct: 76 LRKLSLQDVGMTDESASELAPLTKLQS-LDMRGVSITGEALQSLGQLTELERLLFRGQPI 134
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN---LEILSLSGTQIDDYAISY 257
D + +A + L+ L L +T S+ G+ HL N L+ L L T D ++
Sbjct: 135 RDADLAQLAPL-TKLKVLGLDDTDASAGGLE----HLQNAHDLKELYLFNTPTVDEELAV 189
Query: 258 MSMMPSLKFIDISNTDIKGF----IQQVGAETDLVLSLTALQN--------LNHLERLNL 305
++ P+L + + +D+ G + ++G+ DL +S T + + L L LNL
Sbjct: 190 LTKFPALAKLRLRGSDVTGSGMAELAKIGSLEDLDVSETKVDDAGAAEIAKLPKLTDLNL 249
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 365
+T+V+DA+L L+ L L+L LTD +L L+++ L L + +T++G+
Sbjct: 250 WKTKVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILE 309
Query: 366 FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
+SL+ L + +T+D F + P I + H
Sbjct: 310 LAKSKSLETL-IVTRTKVTDDGAAAFAAIAPNITLQH 345
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KVTDA + L ++TLE+L L LT +ALL+++ NL L LG VTD + L
Sbjct: 253 KVTDASLPDLAKLTTLERLNLDANDLTDANLALLAAMPNLKWLHLGSTSVTDAGILELAK 312
Query: 74 LTKLEYLDLWGSQVSNRG 91
LE L + ++V++ G
Sbjct: 313 SKSLETLIVTRTKVTDDG 330
>gi|46446522|ref|YP_007887.1| hypothetical protein pc0888 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400163|emb|CAF23612.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 653
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 193/389 (49%), Gaps = 36/389 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C K+TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L
Sbjct: 272 LTALQHLELSDCRKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLAHLTPLTALQHLNLS 331
Query: 60 G--LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA--W----TG 110
+TD L L LT L++L+L + ++++ G LK+ L L+L W G
Sbjct: 332 RCYYKLTDAGLAHLTPLTALQHLNLSFCDKLTDAGLVHLKLLTGLQHLDLREFWELTGAG 391
Query: 111 VTKLPNISSLECLNLSNCTIDSILE-GNENKAPLAKISLAG----TTFINEREAFLYIET 165
+ L +++L+ L+LS C D + + G + PL + N L + T
Sbjct: 392 LAHLTTLTALQHLDLSGC--DKLTDVGLAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLT 449
Query: 166 SL--LSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSN 222
L L+ + + + + LT + AL+HLDLS S + DD + + + A L++L+LS
Sbjct: 450 GLQHLNLSECYHLTDAGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTA-LQHLDLSQ 508
Query: 223 -TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
++ + G+ L L L+ L L+ + + D +++++ + +L+ +++S G +
Sbjct: 509 CSKLTDDGLAHLTP-LTALQHLVLARCRNLTDAGLAHLTPLETLQHLNLS-----GGYKL 562
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSL 339
GA + L ALQ+L+ L N ++DA L L+ L HL L LTD L
Sbjct: 563 TGAGLAHLRPLVALQHLD-LSYCN----GLTDAGLAHLTPLVALQHLDLSYCDGLTDAGL 617
Query: 340 HQLSSLSKLTNLSIRDA-VLTNSGLGSFK 367
L L L +L + LT++GL FK
Sbjct: 618 THLRPLVALQHLDLSYCDGLTDAGLAHFK 646
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 180/387 (46%), Gaps = 68/387 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
LK L L +C +TD G+ HL ++ L+ L LS+ LT G+A L+ L L L+L
Sbjct: 250 LKVLHLEKCQVITDDGLAHLTPLTALQHLELSDCRKLTDAGLAHLTPLTALQHLNLSFCD 309
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+TD L L LT L++L+L + L G+ L +++L+
Sbjct: 310 KLTDAGLAHLTPLTALQHLNL-----------------SRCYYKLTDAGLAHLTPLTALQ 352
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
LNLS C D + + L L G ++ RE F +++ + L+
Sbjct: 353 HLNLSFC--DKLTDAGLVHLKL----LTGLQHLDLRE-----------FWELTGAGLAH- 394
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVG----ANLRNLNLSNTR-FSSAGVGILAGH 236
LT + AL+HLDLS G D + V L++L+L R ++AG+ L
Sbjct: 395 --LTTLTALQHLDLS----GCDKLTDVGLAHLTPLTTLQHLDLKRCRNLTNAGLVHLKL- 447
Query: 237 LPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L+ L+LS + D +++++ + +L+ +D+S Q TD L L
Sbjct: 448 LTGLQHLNLSECYHLTDAGLAHLTPLTALQHLDLS---------QCSKLTD--DGLAHLT 496
Query: 296 NLNHLERLNLEQ-TQVSD---ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L+ L+L Q ++++D A L PL+ + L+ RN LTD L L+ L L +L
Sbjct: 497 PLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLARCRN--LTDAGLAHLTPLETLQHL 554
Query: 352 SIRDAV-LTNSGLGSFKPPRSLKLLDL 377
++ LT +GL +P +L+ LDL
Sbjct: 555 NLSGGYKLTGAGLAHLRPLVALQHLDL 581
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 28/194 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS+C K+TD G+ HL ++ L+ L LS+ + LT DG+A L+ L L L L
Sbjct: 473 LTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLVLA 532
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L L L++L+L G +++ G A L+ L L+L++ G+
Sbjct: 533 RCRNLTDAGLAHLTPLETLQHLNLSGGYKLTGAGLAHLRPLVALQHLDLSYCNGLTDAGL 592
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L + +L+ L+LS C D + + AG T + A +++ LS+
Sbjct: 593 AHLTPLVALQHLDLSYC--DGLTD-------------AGLTHLRPLVALQHLD---LSYC 634
Query: 172 D-VSNSSLSRFCFL 184
D ++++ L+ F FL
Sbjct: 635 DGLTDAGLAHFKFL 648
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 184 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRF--SSAGVGILAGHLPNL 240
LT + AL+HL+LS + D + + + A L++LNLS + + AG+ L L L
Sbjct: 294 LTPLTALQHLNLSFCDKLTDAGLAHLTPLTA-LQHLNLSRCYYKLTDAGLAHLTP-LTAL 351
Query: 241 EILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
+ L+LS ++ D + ++ ++ L+ +D+ + F + GA + +LTALQ H
Sbjct: 352 QHLNLSFCDKLTDAGLVHLKLLTGLQHLDL-----REFWELTGAGLAHLTTLTALQ---H 403
Query: 300 LERLNLEQ-TQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L+ ++ T V A L PL+T + HL L R +LT+ L L L+ L +L++ +
Sbjct: 404 LDLSGCDKLTDVGLAHLTPLTTLQ---HLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECY 460
Query: 358 -LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT++GL P +L+ LDL LT+D +
Sbjct: 461 HLTDAGLAHLTPLTALQHLDLSQCSKLTDDGL 492
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 50/291 (17%)
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G+ L +++L+ L LS+C K++ AG + A ++ LS
Sbjct: 265 GLAHLTPLTALQHLELSDC---------------RKLTDAGLAHLTPLTALQHLN---LS 306
Query: 170 FLD-VSNSSLSRFCFLTQMKALEHLDLSSSM--IGDDSVEMVACVGANLRNLNLSNT-RF 225
F D ++++ L+ LT + AL+HL+LS + D + + + A L++LNLS +
Sbjct: 307 FCDKLTDAGLAH---LTPLTALQHLNLSRCYYKLTDAGLAHLTPLTA-LQHLNLSFCDKL 362
Query: 226 SSAGV---GILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
+ AG+ +L G HL E L+G +++++ + +L+ +D+S D +
Sbjct: 363 TDAGLVHLKLLTGLQHLDLREFWELTGA-----GLAHLTTLTALQHLDLSGCDK---LTD 414
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVS 338
VG L L L L+ L+L++ + +++A L L L HL+L LTD
Sbjct: 415 VG--------LAHLTPLTTLQHLDLKRCRNLTNAGLVHLKLLTGLQHLNLSECYHLTDAG 466
Query: 339 LHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
L L+ L+ L +L + + LT+ GL P +L+ LDL LT+D +
Sbjct: 467 LAHLTPLTALQHLDLSQCSKLTDDGLAHLTPLTALQHLDLSQCSKLTDDGL 517
>gi|46447590|ref|YP_008955.1| hypothetical protein pc1956 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401231|emb|CAF24680.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 659
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 191/397 (48%), Gaps = 53/397 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ LK L+L+ C K+T+ G+ HL ++ L+ L L LT G+A L+ L L L+L
Sbjct: 274 LVALKHLNLNFCDKLTNTGLAHLRPLTALQHLNLGNCRNLTDAGLAHLTPLTALQHLNLN 333
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L++LDL + +++ G LK L LNL+ G+
Sbjct: 334 FCDKLTDTGLVRLSPLTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGL 393
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L + +L+ L+LS+C ++ AG + A Y++ S +
Sbjct: 394 VHLKLLVALQHLDLSDCN---------------NLTDAGLAHLTPLTALQYLDLSYCN-- 436
Query: 172 DVSNSSLSRFCFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAG 229
+++++ L FLT AL+HLDL + DD + + + A L+ L+LS R + AG
Sbjct: 437 NLTDAGLVHLKFLT---ALQHLDLRGCDKVADDGLAHLTPLTA-LQALSLSQCRNLTDAG 492
Query: 230 VGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN----TDIKGFIQ--QVG 282
+G L L L+ L LS + D + ++ + +L+ +D+S TD+ G + +
Sbjct: 493 LGHLKL-LTALQYLRLSQCWNLTDAGLIHLRPLVALQHLDLSYCGNLTDV-GLVHLTPLM 550
Query: 283 AETDLVLS---------LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN- 331
A L L+ L L++L L+ L+L Q ++DA L L L HL L
Sbjct: 551 ALQHLDLNYCENLTGDGLAHLRSLTTLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSYC 610
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFK 367
+ TDV L L+SL L +L++R +T+ GL FK
Sbjct: 611 GNFTDVGLVHLTSLMALQHLNLRGCDRVTDVGLALFK 647
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 48/343 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA---LLSSLQNLSVL 56
+T L+ LDLS C +TDAG+ HL + L+ L LS LT G+ LL +LQ+L +
Sbjct: 349 LTALQHLDLSDCENLTDAGLVHLKPLVALQHLNLSCCENLTDAGLVHLKLLVALQHLDLS 408
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL------AWT 109
D L TD L L LT L+YLDL + + +++ G LK L L+L A
Sbjct: 409 DCNNL--TDAGLAHLTPLTALQYLDLSYCNNLTDAGLVHLKFLTALQHLDLRGCDKVADD 466
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G+ L +++L+ L+LS C ++ AG + A Y+ S
Sbjct: 467 GLAHLTPLTALQALSLSQC---------------RNLTDAGLGHLKLLTALQYLRLS--- 508
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLS--SSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
N + + L + AL+HLDLS ++ V + + +LN +
Sbjct: 509 --QCWNLTDAGLIHLRPLVALQHLDLSYCGNLTDVGLVHLTPLMALQHLDLNYCE-NLTG 565
Query: 228 AGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
G+ L L L+ LSL+ + D + ++ + +L+ +D+S G VG
Sbjct: 566 DGLAHLRS-LTTLQHLSLNQCWNLTDAGLVHLEPLTALQHLDLSYC---GNFTDVG---- 617
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
++ LT+L L HL + +V+D L F +HL +
Sbjct: 618 -LVHLTSLMALQHLNLRGCD--RVTDVGLALFKIFATSLHLKI 657
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 152/352 (43%), Gaps = 72/352 (20%)
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 115
+TD L +L+ L+ L L + +++ G L L LNL + TG+ L
Sbjct: 238 LTDAHLLALKNCKNLKELHLQECRNLTDAGLVHLAPLVALKHLNLNFCDKLTNTGLAHLR 297
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLD-V 173
+++L+ LNL NC N A LA ++ L +N L+F D +
Sbjct: 298 PLTALQHLNLGNCR-------NLTDAGLAHLTPLTALQHLN------------LNFCDKL 338
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+++ L R L+ + AL+HLDLS + AG+ L
Sbjct: 339 TDTGLVR---LSPLTALQHLDLSDC------------------------ENLTDAGLVHL 371
Query: 234 AGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
L L+ L+LS + + D + ++ ++ +L+ +D+S+ + A + LT
Sbjct: 372 KP-LVALQHLNLSCCENLTDAGLVHLKLLVALQHLDLSDCN-----NLTDAGLAHLTPLT 425
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNL 351
ALQ L+ L N ++DA L L L HL LR + D L L+ L+ L L
Sbjct: 426 ALQYLD-LSYCN----NLTDAGLVHLKFLTALQHLDLRGCDKVADDGLAHLTPLTALQAL 480
Query: 352 SIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
S+ LT++GLG K +L+ L L W LT+ ++ + P + + H
Sbjct: 481 SLSQCRNLTDAGLGHLKLLTALQYLRLSQCWNLTDAGLIH---LRPLVALQH 529
>gi|46447549|ref|YP_008914.1| hypothetical protein pc1915 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401190|emb|CAF24639.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 683
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 46/379 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ LDL C +TDAG+ HL ++ L+ L LS+ G LT G+A L+ L L L+L
Sbjct: 323 LTALQHLDLRVCKNITDAGLAHLAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLY 382
Query: 60 -GLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
+TD L L+ LT L+ L L W +++ G A L L LNL+
Sbjct: 383 FCFNLTDAGLVHLRPLTALQTLGLSQCWN--LTDTGLAHLTPLTALQHLNLSRCYKLTDA 440
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA-----------KISLAGTTFINERE 158
G+ L +++L+ LNLS C + +G + APL K++ AG +
Sbjct: 441 GLAHLTPLTALQHLNLSYCE-NLTDDGLAHLAPLTALQYLRLSQCWKLTDAGLAHLTPLT 499
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
A ++ S ++++ L+R LT + AL+HLDL + D+ + L++L
Sbjct: 500 ALQHLNLS--RCYKLTDAGLAR---LTPLTALQHLDLKYCINLTDAGLARLTPLSGLQHL 554
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGF 277
L+N ++ + L L+ L+L+ + + D +++++ + +L+ +D+S
Sbjct: 555 ALTNCKYLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLTALQHLDLS------- 607
Query: 278 IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS-L 334
+ TD L+ LT L L H LNL + ++DA L LS L HL+L S L
Sbjct: 608 --ECRHLTDAGLAHLTPLTGLQH---LNLSWCRNLTDAGLAHLSPLSVLQHLALSQCSRL 662
Query: 335 TDVSLHQLSSLSKLTNLSI 353
TD L + +L+ NL I
Sbjct: 663 TDDGLDRFKTLATSLNLEI 681
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 189/392 (48%), Gaps = 48/392 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C +TDAG+ HL ++ L+ L LS LT G+A L+ L L LDL
Sbjct: 273 LTGLQHLNLSWCRNLTDAGLAHLAPLTALQYLDLSHCRNLTDTGLAHLTPLTALQHLDLR 332
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L+ LDL +++ G A L L LNL + G+
Sbjct: 333 VCKNITDAGLAHLAPLTALQNLDLSDCGHLTDAGLAYLTPLTALQHLNLYFCFNLTDAGL 392
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSF 170
L +++L+ L LS C N LA ++ L +N +
Sbjct: 393 VHLRPLTALQTLGLSQC-------WNLTDTGLAHLTPLTALQHLNLSRCY---------- 435
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSA 228
++++ L+ LT + AL+HL+LS + DD + +A + A L+ L LS + + A
Sbjct: 436 -KLTDAGLAH---LTPLTALQHLNLSYCENLTDDGLAHLAPLTA-LQYLRLSQCWKLTDA 490
Query: 229 GVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G+ L L L+ L+LS ++ D ++ ++ + +L+ + D+K I A
Sbjct: 491 GLAHLTP-LTALQHLNLSRCYKLTDAGLARLTPLTALQHL-----DLKYCINLTDAG--- 541
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLS 346
+ LT L L HL N + ++DA L L+ L +L+L N +LTDV L L+ L+
Sbjct: 542 LARLTPLSGLQHLALTNCK--YLTDAGLAHLTLLTALQYLALANCKNLTDVGLAHLTPLT 599
Query: 347 KLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDL 377
L +L + + LT++GL P L+ L+L
Sbjct: 600 ALQHLDLSECRHLTDAGLAHLTPLTGLQHLNL 631
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 19/234 (8%)
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQM--KALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
Y+E + +S L S L+ F + +E ++ S + D+ +V NL+ L
Sbjct: 196 YLELTTVSALLNQTSQLTEFEKILNHFSNEIERVNFSENAHLTDAHLLVLKNCKNLKVLY 255
Query: 220 LSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGF 277
L R + AG+ L L L+ L+LS + + D +++++ + +L+++D+S
Sbjct: 256 LQGCRNLTDAGLAHLTP-LTGLQHLNLSWCRNLTDAGLAHLAPLTALQYLDLS------- 307
Query: 278 IQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LT 335
TD L+ LT L L HL+ + ++DA L L+ L +L L + LT
Sbjct: 308 --HCRNLTDTGLAHLTPLTALQHLDLRVCKN--ITDAGLAHLAPLTALQNLDLSDCGHLT 363
Query: 336 DVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
D L L+ L+ L +L++ LT++GL +P +L+ L L W LT+ +
Sbjct: 364 DAGLAYLTPLTALQHLNLYFCFNLTDAGLVHLRPLTALQTLGLSQCWNLTDTGL 417
>gi|46447129|ref|YP_008494.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400770|emb|CAF24219.1| hypothetical protein pc1495 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 559
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 62/309 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS+C K+TD G+ HL ++ L+ L LS LT G+A L+ L+ L L+L
Sbjct: 274 LTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLR 333
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-W-----TGV 111
G +TD L L LT L+YLDL W +++ G A L L LNL+ W G+
Sbjct: 334 GFGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGL 393
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+L +++L+ L+LS+C EN
Sbjct: 394 ARLIFLTALQHLDLSDC---------EN-------------------------------- 412
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGV 230
++++ L R LT + AL+HL LS M D+ + L++LNLS + AG+
Sbjct: 413 -LTSAGLER---LTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGL 468
Query: 231 GILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L L L+ L+L G + + D ++Y++ + +L+ +++S + + G T L
Sbjct: 469 VHLTP-LTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCK---HLTEAGL-THLA- 522
Query: 290 SLTALQNLN 298
SLTALQ+LN
Sbjct: 523 SLTALQHLN 531
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 117/236 (49%), Gaps = 16/236 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL + L+ L L G LT G+ L+ L L LDL
Sbjct: 299 LTALQHLDLSYCKNLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLS 358
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFL------NLAWTGV 111
+TD L L LT L++L+L G +++ G A L L L NL G+
Sbjct: 359 WCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGL 418
Query: 112 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
+L ++++L+ L LS C D+ L L ++L+G + + + L
Sbjct: 419 ERLTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHLTPLTALQ 478
Query: 170 FLDV---SNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLS 221
L++ N + + +LT + AL+HL+LS + + + +A + A L++LNLS
Sbjct: 479 HLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEAGLTHLASLTA-LQHLNLS 533
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +T AG++ L S++ L+ L LS LT G+ L+ L L L+L
Sbjct: 399 LTALQHLDLSDCENLTSAGLERLTSLTALQHLGLSYCMNLTDAGLIHLTPLTALQHLNLS 458
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGV 111
G +TD L L LT L++L+L G + +++ G A L L LNL+ G+
Sbjct: 459 GCFHLTDAGLVHLTPLTALQHLNLGGCENLTDAGLAYLTPLTALQHLNLSRCKHLTEAGL 518
Query: 112 TKLPNISSLECLNLSNC 128
T L ++++L+ LNLS C
Sbjct: 519 THLASLTALQHLNLSYC 535
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 60/358 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
LK L L C +TD + HL ++ L+ L LS+ LT G+ L+ L L LDL
Sbjct: 252 LKVLHLVSCQAITDDRLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCK 311
Query: 63 -VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TD L L L L++L+L G ++++ G L L +L+L+W
Sbjct: 312 NLTDAGLAHLTPLKALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLSW------------ 359
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
C NL++ A LA ++ L G +N L + ++++ L+
Sbjct: 360 -CKNLTD-------------AGLAHLTPLTGLQHLN-----------LSGWYHLTDAGLA 394
Query: 180 RFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHL 237
R FLT AL+HLDLS + +E + + A L++L LS + AG+ L L
Sbjct: 395 RLIFLT---ALQHLDLSDCENLTSAGLERLTSLTA-LQHLGLSYCMNLTDAGLIHLTP-L 449
Query: 238 PNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L+ L+LSG + D + +++ + +L+ +++ G A + LTALQ+
Sbjct: 450 TALQHLNLSGCFHLTDAGLVHLTPLTALQHLNLG-----GCENLTDAGLAYLTPLTALQH 504
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 353
LN L R +++A L L++ L HL+L +LTD L + +L+ NL I
Sbjct: 505 LN-LSRCK----HLTEAGLTHLASLTALQHLNLSYCDNLTDAGLERFKALAASLNLKI 557
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 19/218 (8%)
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLP 238
R LT + AL+HL+LS D+ + L++L+LS + + AG+ L L
Sbjct: 267 RLAHLTPLTALQHLNLSKCRKLTDTGLVHLTPLTALQHLDLSYCKNLTDAGLAHLTP-LK 325
Query: 239 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQN 296
L+ L+L G ++ D + +++ + +L+++D+S + + + TD L+ LT L
Sbjct: 326 ALQHLNLRGFGKLTDAGLVHLTPLTALQYLDLS------WCKNL---TDAGLAHLTPLTG 376
Query: 297 LNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIR 354
L HL NL ++DA L L L HL L + +LT L +L+SL+ L +L +
Sbjct: 377 LQHL---NLSGWYHLTDAGLARLIFLTALQHLDLSDCENLTSAGLERLTSLTALQHLGLS 433
Query: 355 DAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
+ LT++GL P +L+ L+L G + LT+ ++
Sbjct: 434 YCMNLTDAGLIHLTPLTALQHLNLSGCFHLTDAGLVHL 471
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 22/240 (9%)
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-----EMVACVG 212
E F E SL+ ++ N + C L ++K + S+++ S ++ +
Sbjct: 167 ETFNSTEESLIGLKELLN--FAHRCQLNRLKNYLEFIVVSTLLNQTSQLAEFERIINHLS 224
Query: 213 ANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 270
+ LN SN T + A L NL++L L Q I D +++++ + +L+ +++S
Sbjct: 225 NEIEALNFSNNTYLTDAHFSALKD-CKNLKVLHLVSCQAITDDRLAHLTPLTALQHLNLS 283
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
+ +T LV LT L L HL+ + ++DA L L+ K L HL+LR
Sbjct: 284 KC-------RKLTDTGLV-HLTPLTALQHLDLSYCKN--LTDAGLAHLTPLKALQHLNLR 333
Query: 331 N-ASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LTD L L+ L+ L L + LT++GL P L+ L+L G + LT+ +
Sbjct: 334 GFGKLTDAGLVHLTPLTALQYLDLSWCKNLTDAGLAHLTPLTGLQHLNLSGWYHLTDAGL 393
>gi|149174278|ref|ZP_01852905.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
gi|148846823|gb|EDL61159.1| serine/threonine protein kinase [Planctomyces maris DSM 8797]
Length = 1815
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 182/424 (42%), Gaps = 31/424 (7%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
++D ++HL + L L LS + G+A L L+NL VL L P+TD L+ L L
Sbjct: 1391 ISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEGLKHLSGL 1450
Query: 75 TKLEYLDLWGSQVSNRGAAVL-KMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNC 128
L+ L+L ++V+ +G A L K P ++ T + + + E +
Sbjct: 1451 KMLQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIAEWVIGMGG 1510
Query: 129 TIDSILEGNENKAPLA-------KISLAGTTFINER-EAFLYIETSLLSFLDVSNSSLSR 180
I + N L +SL +F + + ++T FL+ ++ S +
Sbjct: 1511 GIGIGFKLNYKIEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLESTSISDTG 1570
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
+L QM+ LE + L + I D+ + + + NLR L LS T+ + G+G L LP L
Sbjct: 1571 LQYLRQMQNLEEIFLDYTNITDEGLLHLRGL-QNLRVLRLSKTKITGEGLGHLK-DLPRL 1628
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIK----GFIQQVGAETDLVLSLTA-- 293
+ ++ I + + M + L ++IS N+ + G+I+ + L L
Sbjct: 1629 HTIDVNRAAITNSGMKAMGDLKQLTSLNISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKI 1688
Query: 294 -------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
LQ + LE L L T ++ L L+ + L L L N +TD L L L
Sbjct: 1689 TDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKITDSGLEHLQDLK 1748
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSV 406
L +L + ++++GL + L+ LDL +T I K P+ ++ +
Sbjct: 1749 NLRDLRLDLTPVSDAGLQHLYSLKKLENLDLR-ETKVTSQGIADLQKALPKCKIESDFKT 1807
Query: 407 ICPS 410
P+
Sbjct: 1808 KPPA 1811
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 60/418 (14%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
++++G++ L + LEKL + T + G+ L L+NL +L L ++D+ L+ L L
Sbjct: 1343 ISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLKILGLESTSISDVDLQHLHGL 1402
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLN-------- 124
L L L ++++ G A LK L L+L T +T L ++S L+ L
Sbjct: 1403 KILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEGLKHLSGLKMLQTLELQKTK 1462
Query: 125 ------------LSNCTIDSILEGNE---NKAPLAKISLA----------GTTF-INERE 158
L NC I S E + +P+ +A G F +N +
Sbjct: 1463 VTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIAEWVIGMGGGIGIGFKLNYKI 1522
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
L E + + + + N+S L ++K L++L L S+ I D ++ + + NL
Sbjct: 1523 EELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLFLESTSISDTGLQYLRQM-QNLE 1581
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-----ISN 271
+ L T + G+ L G L NL +L LS T+I + ++ +P L ID I+N
Sbjct: 1582 EIFLDYTNITDEGLLHLRG-LQNLRVLRLSKTKITGEGLGHLKDLPRLHTIDVNRAAITN 1640
Query: 272 TDIK--GFIQQVGAETDLVLSLTA---------LQNLNHLERLNLE-QTQVSDATLFPLS 319
+ +K G ++Q+ T L +S + ++ L LE+L +++D L L
Sbjct: 1641 SGMKAMGDLKQL---TSLNISFNSQVDDTGLGYIEGLTKLEKLFAHLVPKITDEGLKHLQ 1697
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
K+L L+L + +T L QL+ L+ L + + +T+SGL + ++L+ L L
Sbjct: 1698 GMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTNCKITDSGLEHLQDLKNLRDLRL 1755
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 164/374 (43%), Gaps = 31/374 (8%)
Query: 32 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
L L T + D + L+ L+ L L+L V+D L+ L+ + L Y+ L G+Q++++G
Sbjct: 1265 LDLKGTSVKDDDLKRLAGLKTLPKLNLENTLVSDTGLQYLKDIP-LNYISLIGTQITDKG 1323
Query: 92 AAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
L P L+ L + T GV +L ++ LE L+ +N ID + G+ KI
Sbjct: 1324 FGYLSNMPSLTTLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDGVGLGHLKDLKNLKI 1383
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDS 204
+T I++ + +L L +SN + S +L +K L+ L L S+ I D+
Sbjct: 1384 LGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDEG 1443
Query: 205 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS--------LSGTQIDDYAIS 256
++ ++ + L+ L L T+ + G+ L LPN +I+S S + + D I+
Sbjct: 1444 LKHLSGLKM-LQTLELQKTKVTPQGIASLQKALPNCKIVSDFETKPIMTSDSPMTDREIA 1502
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS------------LTALQNLNHLERLN 304
+ + K I+++ E + S L L L L+ L
Sbjct: 1503 EWVIGMGGGIGIGFKLNYK--IEELPTEPVIFNSVSLKNASFEDHDLQRLAKLKTLKYLF 1560
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
LE T +SD L L + L + L ++TD L L L L L + +T GLG
Sbjct: 1561 LESTSISDTGLQYLRQMQNLEEIFLDYTNITDEGLLHLRGLQNLRVLRLSKTKITGEGLG 1620
Query: 365 SFKPPRSLKLLDLH 378
K L +D++
Sbjct: 1621 HLKDLPRLHTIDVN 1634
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 41/257 (15%)
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL-TQMKALEHLDLSSSMIGDDSV 205
S A + ERE ++ + +++ S+++ L T+ + LDL + + DD +
Sbjct: 1219 STASEKPMTEREVAEWV-IGMGGWVNTGGKSITKIEQLPTEPFVINFLDLKGTSVKDDDL 1277
Query: 206 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL- 264
+ +A + L LNL NT S G+ L +P L +SL GTQI D Y+S MPSL
Sbjct: 1278 KRLAGL-KTLPKLNLENTLVSDTGLQYLK-DIP-LNYISLIGTQITDKGFGYLSNMPSLT 1334
Query: 265 -----------------------KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
+ + +NT I G + L L++L +L+
Sbjct: 1335 TLYVGSTAISNSGVEQLKDMKQLEKLSFTNTQIDG------------VGLGHLKDLKNLK 1382
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
L LE T +SD L L K LI L L N + D L L L L LS+ +T+
Sbjct: 1383 ILGLESTSISDVDLQHLHGLKILIVLGLSNCKIADSGLAYLKDLKNLKVLSLDSTPITDE 1442
Query: 362 GLGSFKPPRSLKLLDLH 378
GL + L+ L+L
Sbjct: 1443 GLKHLSGLKMLQTLELQ 1459
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L++L K+TD G+KHL + LE L LS TG+T G+ L+ ++LS LDL
Sbjct: 1674 LTKLEKLFAHLVPKITDEGLKHLQGMKQLESLTLSSTGITTTGLEQLTKHESLSKLDLTN 1733
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TD L LQ L L L L + VS+ G L +L L+L T VT I+ L
Sbjct: 1734 CKITDSGLEHLQDLKNLRDLRLDLTPVSDAGLQHLYSLKKLENLDLRETKVTS-QGIADL 1792
Query: 121 ECLNLSNCTIDS 132
+ L C I+S
Sbjct: 1793 QKA-LPKCKIES 1803
>gi|406830574|ref|ZP_11090168.1| hypothetical protein SpalD1_03019 [Schlesneria paludicola DSM
18645]
Length = 404
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 59/339 (17%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
++D + TDA + L + LE L LS T ++ GIA LS L++L+VL L LPV +
Sbjct: 54 QIDCRDAQEFTDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKN 113
Query: 66 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 125
+ L L L LD+ +QVS+ A G PN+++L
Sbjct: 114 AQFKKLIELDSLTTLDVADTQVSDA----------------ALQGSIAHPNLTTL----- 152
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCF 183
+L GN +I+ AG +N+ F L+ LD++ + +S
Sbjct: 153 -------VLSGN-------RITNAG---LNDLSKF-----GQLAILDLTQTRVSDEGMTA 190
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L +++ L L LS ++I D +E + + ++L+ L+L+ T+ + AG+ L G L NL L
Sbjct: 191 LKRLENLTELRLSGNVITDTGLEAIGGL-SHLKILDLTATQITDAGLKHLRG-LNNLNEL 248
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L Q+ D ++ + +P+L +D T I TD LS AL + +L L
Sbjct: 249 KLGRNQVKDNGVNALVEIPTLIALDFYATQI----------TDECLS--ALGQIANLTTL 296
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
+L + +SD L L+ + L + L A +T L +
Sbjct: 297 DLGKNPISDFGLRNLTRLRNLKEIGLVEAPVTASGLKRF 335
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 130/320 (40%), Gaps = 67/320 (20%)
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
TD + L+ +LE LDL G+Q+S +G A L + L+ L+LA V KL +
Sbjct: 64 TDADVTLLKTFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIELD 123
Query: 119 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
SL L++++ + D+ L+G+ L + L+G N +
Sbjct: 124 SLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITN-----------------AGLND 166
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
LS+F L L+L+ TR S G+ L L
Sbjct: 167 LSKF-------------------------------GQLAILDLTQTRVSDEGMTALK-RL 194
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
NL L LSG I D + + + LK +D++ T I TD L L+ L
Sbjct: 195 ENLTELRLSGNVITDTGLEAIGGLSHLKILDLTATQI----------TDA--GLKHLRGL 242
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
N+L L L + QV D + L LI L +TD L L ++ LT L +
Sbjct: 243 NNLNELKLGRNQVKDNGVNALVEIPTLIALDFYATQITDECLSALGQIANLTTLDLGKNP 302
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
+++ GL + R+LK + L
Sbjct: 303 ISDFGLRNLTRLRNLKEIGL 322
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVG 282
F+ A V +L P LE L LSGTQI I+ +S++ SL + ++N +K F + +
Sbjct: 63 FTDADVTLLK-TFPELESLDLSGTQISGKGIAELSVLRSLTVLHLANLPVKNAQFKKLIE 121
Query: 283 AET-------DLVLSLTALQN-LNH--LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
++ D +S ALQ + H L L L ++++A L LS F +L L L
Sbjct: 122 LDSLTTLDVADTQVSDAALQGSIAHPNLTTLVLSGNRITNAGLNDLSKFGQLAILDLTQT 181
Query: 333 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
++D + L L LT L + V+T++GL + LK+LDL
Sbjct: 182 RVSDEGMTALKRLENLTELRLSGNVITDTGLEAIGGLSHLKILDL 226
>gi|344174745|emb|CCA86555.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
syzygii R24]
Length = 468
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 153/376 (40%), Gaps = 57/376 (15%)
Query: 4 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
LKELDLSRC +T AG+ HL + L +L + + + A+G L++ L+ LD+
Sbjct: 76 LKELDLSRCRGPITAAGIAHLSRLP-LVRLNVRDKRIGAEGARRLANHPTLTSLDVSNGR 134
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ R+L TKL L + +++ GA L L+ L+++ G+
Sbjct: 135 IGPEGARALADNTKLTTLSVSHNRIGAEGAKALAASKTLTSLDISENGI----------- 183
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
GNE LA + T +N + + +E +
Sbjct: 184 -------------GNEGACALATNAKLTTLNVNRNQ--IGVEGA---------------K 213
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 214 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 271
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L + I D ++ SL + I + I GA+ AL L
Sbjct: 272 LRIDSNTIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 319
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNL + DA S LI LS+R + L+D L++ LT L D + ++G
Sbjct: 320 LNLGYNGIGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAG 379
Query: 363 LGSFKPPRSLKLLDLH 378
+ R+L LD+
Sbjct: 380 ARALAANRTLTTLDVR 395
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAG + + +TL L + +GL+ G L++ + L+ LD G + D R+L
Sbjct: 327 IGDAGAQAWSANTTLISLSVRRSGLSDAGATTLAASKTLTTLDAGDNTIRDAGARALAAN 386
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
L LD+ +++ N GA L RL+ L+L VTK
Sbjct: 387 RTLTTLDVRSNEIENAGARALAANTRLASLDLRNNRVTK 425
>gi|30684506|ref|NP_563980.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|23297087|gb|AAN13089.1| unknown protein [Arabidopsis thaliana]
gi|332191234|gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 585
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 205/434 (47%), Gaps = 77/434 (17%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGG 60
T L+ L+ + C ++++ G+ HL +S L L + +TA G+ LS+L NL LDL
Sbjct: 162 TNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEK 221
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
P D L L+ LTKLE L++ W + +++ L + L L + + +T + IS
Sbjct: 222 CPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQICCSKITDI-GISY 280
Query: 120 LE------------CLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREAF------ 160
L+ C +++ +D++ +LAG ++N R F
Sbjct: 281 LKGLNKLNLLNLEGCRHVTAACLDTL------------TALAGLMYLNLNRCNFSDSGCE 328
Query: 161 LYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
+ + L L++ ++++ C L + LE L+L S IGD+ + ++ + L++L
Sbjct: 329 KFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSL 387
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
LS+T S G+ L+G L NLE ++LS T + D + +S + SL+ +++ +
Sbjct: 388 ELSDTEVGSNGLRHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV---- 442
Query: 279 QQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------- 329
TD LS LT+L L HL+ L +++D+ L K+L L +
Sbjct: 443 ------TDAGLSALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDT 493
Query: 330 -----------------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L
Sbjct: 494 GVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNL 553
Query: 373 KLLDLHGGWLLTED 386
+ L L L D
Sbjct: 554 RSLTLESCKLSAND 567
>gi|255553315|ref|XP_002517700.1| F-box/LRR-repeat protein, putative [Ricinus communis]
gi|223543332|gb|EEF44864.1| F-box/LRR-repeat protein, putative [Ricinus communis]
Length = 529
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 176/380 (46%), Gaps = 64/380 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L++ C +TDA MK+L + L+ L +S + +T GI+ L L L++L+L G PV
Sbjct: 183 LESLNIKWCNCITDADMKYLSGLVKLKGLQISCSKVTDVGISYLKGLHKLNLLNLEGCPV 242
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
T L SL L L YL+L +S+ G RL LNL + ++ L ++
Sbjct: 243 TVACLDSLSALAALLYLNLNRCHLSDDGCEAFSKLGRLKVLNLGFNDISDACLVHLKGLT 302
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LE LNL +C ID EG LA ++ +++ +LS +V +S L
Sbjct: 303 NLESLNLDSCRIDD--EG------LANLT-----------GLRHLKCLVLSDTEVGSSGL 343
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
LT LE ++LS +MI D + ++ ++L++LNL + + +G+ L +L
Sbjct: 344 RHLSGLTN---LESINLSFTMITDGGIRKLS-GLSSLKSLNLDARQITDSGLAALT-NLT 398
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L L G +I D Y+ +L+ ++I G TD ++N+
Sbjct: 399 GLTHLDLFGARITDSGTHYLRNFKNLQSLEICG----------GGLTD-----AGIRNIK 443
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
+ +N +LTD SL +S L+ L +L++ ++ +
Sbjct: 444 --------------------DLSSLSLLNLSQNCNLTDKSLELISGLTGLVSLNVSNSRI 483
Query: 359 TNSGLGSFKPPRSLKLLDLH 378
T++GL KP ++LK L L
Sbjct: 484 TSAGLQHLKPLKNLKSLTLE 503
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL- 61
L++L L C V D+ M + S +L + LS + +T G+A L NL L+
Sbjct: 108 LQDLHLGECPGVNDSWMDVISSQGISLLSVDLSGSDVTDSGLAYLKDCTNLQALNFNYCD 167
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
++D L ++ L KLE L++ W + +++ L +L L ++ + G++ L
Sbjct: 168 QISDPGLSNISDLLKLESLNIKWCNCITDADMKYLSGLVKLKGLQISCSKVTDVGISYLK 227
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L LNL C + + + +++ + + L L++
Sbjct: 228 GLHKLNLLNLEGCPVTVACLDSLSALAALLYLNLNRCHLSDDGCEAFSKLGRLKVLNLGF 287
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ +S C L +K L NL +LNL + R G+ L G
Sbjct: 288 NDISDAC-LVHLKGL----------------------TNLESLNLDSCRIDDEGLANLTG 324
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTAL 294
L +L+ L LS T++ + ++S + +L+ I++S T I G I+++ + L
Sbjct: 325 -LRHLKCLVLSDTEVGSSGLRHLSGLTNLESINLSFTMITDGGIRKLSGLSSLKSL---- 379
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
NL+ Q++D+ L L+ L HL L A +TD H L + L +L I
Sbjct: 380 ---------NLDARQITDSGLAALTNLTGLTHLDLFGARITDSGTHYLRNFKNLQSLEIC 430
Query: 355 DAVLTNSGLGSFK 367
LT++G+ + K
Sbjct: 431 GGGLTDAGIRNIK 443
>gi|13507547|gb|AAK28636.1|AF360339_1 unknown protein [Arabidopsis thaliana]
Length = 585
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 205/434 (47%), Gaps = 77/434 (17%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGG 60
T L+ L+ + C ++++ G+ HL +S L L + +TA G+ LS+L NL LDL
Sbjct: 162 TNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALSNLVNLKKLDLEK 221
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
P D L L+ LTKLE L++ W + +++ L + L L + + +T + IS
Sbjct: 222 CPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRRLQICCSKITDI-GISY 280
Query: 120 LE------------CLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREAF------ 160
L+ C +++ +D++ +LAG ++N R F
Sbjct: 281 LKGLNKLNLLNLEGCRHVTAACLDTL------------TALAGLMYLNLNRCNFSDSGCE 328
Query: 161 LYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
+ + L L++ ++++ C L + LE L+L S IGD+ + ++ + L++L
Sbjct: 329 KFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSL 387
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
LS+T S G+ L+G L NLE ++LS T + D + +S + SL+ +++ +
Sbjct: 388 ELSDTEVGSNGLRHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV---- 442
Query: 279 QQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-------- 329
TD LS LT+L L HL+ L +++D+ L K+L L +
Sbjct: 443 ------TDAGLSALTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDT 493
Query: 330 -----------------RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L
Sbjct: 494 GVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNL 553
Query: 373 KLLDLHGGWLLTED 386
+ L L L D
Sbjct: 554 RSLTLESCKLSAND 567
>gi|296124076|ref|YP_003631854.1| ribonuclease inhibitor [Planctomyces limnophilus DSM 3776]
gi|296016416|gb|ADG69655.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Planctomyces
limnophilus DSM 3776]
Length = 474
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 67/356 (18%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
++TD G + L S LE L+L T + +A LS L L LDL VTD ++SL
Sbjct: 163 TQLTDTGAEVLASFPNLEVLYLRRTNILDPALAHLSKLAKLRALDLRFTNVTDEGMKSLA 222
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLS 126
L++L L L ++V++ ++ P L LN+ W G+++L + +L L L
Sbjct: 223 GLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNV-WGENFTDAGLSQLADTKTLRILELD 281
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
+ + S EG I L G T + E L++ + + N L+ +
Sbjct: 282 DTRLTS--EG--------LIKLGGLTNLEE----LHVRRT-----RIKNDGLA---VVKN 319
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
M + L L ++ D +E V+ + NL L+L+ F GV LAG L +LE LSL
Sbjct: 320 MPKMRRLLLRDTLCTDPGLEAVSGL-KNLVELDLTEGIFGDDGVKNLAG-LTSLEDLSLW 377
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
T D I ++++L L+ LNLE
Sbjct: 378 ATTTSDAGIE------------------------------------SIRDLKKLKALNLE 401
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
QT+++DA ++ F EL L+L +TD +L +L++L KL LS+ + ++ + G
Sbjct: 402 QTRITDAAAKTIAGFGELTELNLSQTEVTDATLKELAALKKLKKLSVNNCIMLSGG 457
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
+ + IGDD + +VA + +L L L + + GV +L L NL +L L TQ+ D
Sbjct: 113 AETSIGDDDLALVAKL-THLTELRLEGPKITDKGV-LLLKPLTNLVVLGLENTQLTDTGA 170
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
++ P+L+ + + T+I L +L L L L L+L T V+D +
Sbjct: 171 EVLASFPNLEVLYLRRTNI------------LDPALAHLSKLAKLRALDLRFTNVTDEGM 218
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
L+ +L L L+ +TD SL ++ L L L++ T++GL ++L++L
Sbjct: 219 KSLAGLSQLRDLRLQATRVTDASLPLIAKLPNLQKLNVWGENFTDAGLSQLADTKTLRIL 278
Query: 376 DLHGGWLLTEDAI 388
+L L +E I
Sbjct: 279 ELDDTRLTSEGLI 291
>gi|356519278|ref|XP_003528300.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform 2 [Glycine max]
Length = 529
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 178/390 (45%), Gaps = 64/390 (16%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
L+L+ C +++D G++ + +S L L + ++A G++ S L NL LDL P
Sbjct: 160 LNLNYCDQISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIH 219
Query: 66 LVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
L L+ LTKLE L+L W + +++ L L L ++ + G++ L +
Sbjct: 220 GGLVHLRGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQK 279
Query: 120 LECLNLSNCTI-----DSILEG------NENKAPLAKISLAGTTFINEREAFLYIETSLL 168
L LNL C + DS+ E N N+ L+ G I+ E + L
Sbjct: 280 LALLNLEGCLVTAACLDSLAELPALSNLNLNRCNLSD---NGCKKISRLENLKVLN---L 333
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
F ++++ L LT+ LE L+L S IGD+ + +A + L L LS+T S
Sbjct: 334 GFNVITDACLVHLKGLTK---LESLNLDSCKIGDEGLVNLAGL-EQLNCLELSDTEVGSN 389
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
G+ L+G L L L L G +I D+ +Y+ +L+ ++I G + G +
Sbjct: 390 GLHHLSG-LTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICG----GVLTDAGVKN--- 441
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
++ L+ L LNL Q N++LTD +L +S L+ L
Sbjct: 442 -----IKELSSLVCLNLSQ-----------------------NSNLTDKTLELISGLTGL 473
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+L++ ++ +TN+GL K ++L+ L L
Sbjct: 474 VSLNVSNSRITNAGLQHLKTLKNLRSLTLE 503
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 152/350 (43%), Gaps = 64/350 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L+L C +TD MK L +++L+ L +S + +T GI+ L LQ L++L+L G
Sbjct: 228 LTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNLEG 287
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VT L SL L L L+L +S+ G + L LNL + +T L
Sbjct: 288 CLVTAACLDSLAELPALSNLNLNRCNLSDNGCKKISRLENLKVLNLGFNVITDACLVHLK 347
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ LE LNL +C I G+E ++LAG
Sbjct: 348 GLTKLESLNLDSCKI-----GDE-----GLVNLAG------------------------- 372
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L Q+ LE LS + +G + + ++ + L +L+L R + G L
Sbjct: 373 --------LEQLNCLE---LSDTEVGSNGLHHLSGL-TGLTDLDLFGARITDFGTNYLK- 419
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
NL L + G + D + + + SL +++S Q TD L L +
Sbjct: 420 KFKNLRSLEICGGVLTDAGVKNIKELSSLVCLNLS---------QNSNLTDKTLEL--IS 468
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
L L LN+ +++++A L L T K L L+L + +T + +L S+
Sbjct: 469 GLTGLVSLNVSNSRITNAGLQHLKTLKNLRSLTLESCKVTANDIKKLKSI 518
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 170/362 (46%), Gaps = 28/362 (7%)
Query: 29 LEKLWLSE-TGLTADGIALLSSLQNLSVL--DLGGLPVTDLVLRSLQVLTKLEYLDL-WG 84
L+ L+L E G+ + + ++SS Q S+L DL G VTD L L+ L L+L +
Sbjct: 107 LQDLYLGEYDGVNDNWMGVISS-QGSSLLSVDLSGSDVTDFGLTYLKDCESLISLNLNYC 165
Query: 85 SQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLECLNLSNC-TIDSILEGN 137
Q+S+RG + L+ L+ ++ G++ + +L L+L C I L
Sbjct: 166 DQISDRGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDLERCPGIHGGLVHL 225
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDL 195
L ++L I + + E + L L++S+S ++ F FL ++ L L+L
Sbjct: 226 RGLTKLESLNLKWCNCITDYDMKPLSELASLKSLEISSSKVTDFGISFLKGLQKLALLNL 285
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
++ ++ +A + A L NLNL+ S G ++ L NL++L+L I D +
Sbjct: 286 EGCLVTAACLDSLAELPA-LSNLNLNRCNLSDNGCKKIS-RLENLKVLNLGFNVITDACL 343
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
++ + L+ +++ + ++G E +++L L+ LN LE L T+V L
Sbjct: 344 VHLKGLTKLESLNLDSC-------KIGDEG--LVNLAGLEQLNCLE---LSDTEVGSNGL 391
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
LS L L L A +TD + L L +L I VLT++G+ + K SL L
Sbjct: 392 HHLSGLTGLTDLDLFGARITDFGTNYLKKFKNLRSLEICGGVLTDAGVKNIKELSSLVCL 451
Query: 376 DL 377
+L
Sbjct: 452 NL 453
>gi|168701212|ref|ZP_02733489.1| hypothetical protein GobsU_16936 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 141/328 (42%), Gaps = 67/328 (20%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TDAG+KHL ++ L L L T + G S + +TD L L+ +
Sbjct: 138 ITDAGLKHLAALDGLSALSLHGT---SRGATSAGSYRG----------ITDAGLNELRAI 184
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L L L G +V++ GA L P+L L L T +T D+ L
Sbjct: 185 KGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGTKIT------------------DAAL 226
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
E N APL +++ TF +A L L+RF LT+++
Sbjct: 227 E---NLAPLTELTEIDLTFTKVTDAGL--------------KHLARFKKLTRVR------ 263
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
LSS+ + D V +A + L +L+LS T+ GV LA L +SL T++ D
Sbjct: 264 LSSTAVTDAGVRELAAL-PELTDLDLSYTKAGDGGVTALAAAPNRLTSVSLEKTRVGDEG 322
Query: 255 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 314
++ P L +++ T +VG D V +L A NL L L T+V+D
Sbjct: 323 AKALAAAPGLTRLNLGYT-------RVG--DDGVSALAAAPNLTGL---TLVATRVTDDG 370
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQL 342
+ L ++L ++ LR +TD ++ +L
Sbjct: 371 VRSLFACRKLAYVELRETEVTDGAIREL 398
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 99/251 (39%), Gaps = 58/251 (23%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
++VTDAG + L ++ L L L T +T + L+ L L+ +DL VTD L+ L
Sbjct: 195 IEVTDAGARTLATMPQLRVLGLEGTKITDAALENLAPLTELTEIDLTFTKVTDAGLKHLA 254
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKL---PNISSLECLN 124
KL + L + V++ G L P L+ L+L++T GVT L PN
Sbjct: 255 RFKKLTRVRLSSTAVTDAGVRELAALPELTDLDLSYTKAGDGGVTALAAAPN-------R 307
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
L++ +++ G+E LA
Sbjct: 308 LTSVSLEKTRVGDEGAKALA---------------------------------------- 327
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
L L+L + +GDD V +A NL L L TR + GV L L +
Sbjct: 328 -AAPGLTRLNLGYTRVGDDGVSALAAA-PNLTGLTLVATRVTDDGVRSLFACR-KLAYVE 384
Query: 245 LSGTQIDDYAI 255
L T++ D AI
Sbjct: 385 LRETEVTDGAI 395
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD--------IKGF------- 277
LAG PNL +L L+G I D + +++ + L + + T +G
Sbjct: 122 LAGQ-PNLVVLRLNGASITDAGLKHLAALDGLSALSLHGTSRGATSAGSYRGITDAGLNE 180
Query: 278 IQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
++ + TDL L L + L L LE T+++DA L L+ EL + L
Sbjct: 181 LRAIKGLTDLSLGGIEVTDAGARTLATMPQLRVLGLEGTKITDAALENLAPLTELTEIDL 240
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+TD L L+ KLT + + +T++G+
Sbjct: 241 TFTKVTDAGLKHLARFKKLTRVRLSSTAVTDAGV 274
>gi|188586163|ref|YP_001917708.1| hypothetical protein Nther_1542 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350850|gb|ACB85120.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 344
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 13/245 (5%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+EL+L+ ++TD G++ L L+++ L+ T +T +G LL+ ++L L L G V
Sbjct: 103 LEELNLNYT-EITDEGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERLILSGTEV 161
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
TD L L L+ LDL G+ V++ GA L L L+L T G+ +L +
Sbjct: 162 TDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVD 221
Query: 119 SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+LE L L + D+ +E L + L GT NE +L E L LD+ +
Sbjct: 222 NLEVLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNEGVKYL-AEADNLEELDLKQTK 280
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
++ L + +LE LDL + + D+ V+ +A + L+ +NL T ++ GV HL
Sbjct: 281 VTDVNALAETDSLEELDLWDTDVTDEGVKELAEADS-LKVVNLDETEVTNEGV----EHL 335
Query: 238 PNLEI 242
+ +I
Sbjct: 336 EDEDI 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 34/320 (10%)
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
+LG +T+ + L LT + G ++ +G LS V L
Sbjct: 46 ELGVEQITEENIEDLTTLT------VSGEDINIKGIEYAINLQELSLQGTKIEDVNTLAE 99
Query: 117 ISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLY----IETSLLS 169
+ +LE LNL+ I EG E A L +ISL T +E L +E +LS
Sbjct: 100 VDNLEELNLNYTEITD--EGIEQLAEADNLKQISLTHTDVTDEGTKLLAESESLERLILS 157
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+V++ L L + L+ LDL + + DD E +A NL L+L +T + G
Sbjct: 158 GTEVTDDGLEH---LIEADNLKKLDLHGTDVTDDGAEHLAETD-NLEKLSLVDTEVTDEG 213
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
+ L + NLE+L L T++ D + Y++ +L+ + + T+I + AE D
Sbjct: 214 IEQLV-KVDNLEVLILGWTEVTDNGVEYLAEADNLEMLHLDGTEITNEGVKYLAEAD--- 269
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+LE L+L+QT+V+D L+ L L L + +TD + +L+ L
Sbjct: 270 ---------NLEELDLKQTKVTDVN--ALAETDSLEELDLWDTDVTDEGVKELAEADSLK 318
Query: 350 NLSIRDAVLTNSGLGSFKPP 369
+++ + +TN G+ +
Sbjct: 319 VVNLDETEVTNEGVEHLEDE 338
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L L + + + L ++ LE L+L+ + I D+ +E +A NL+ ++L++T +
Sbjct: 81 LQELSLQGTKIEDVNTLAEVDNLEELNLNYTEITDEGIEQLAEAD-NLKQISLTHTDVTD 139
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G +LA +LE L LSGT++ D + ++ +LK +D+ TD+ + AETD
Sbjct: 140 EGTKLLA-ESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTDVTDDGAEHLAETD- 197
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+LE+L+L T+V+D + L L L L +TD + L+
Sbjct: 198 -----------NLEKLSLVDTEVTDEGIEQLVKVDNLEVLILGWTEVTDNGVEYLAEADN 246
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L L + +TN G+ +L+ LDL
Sbjct: 247 LEMLHLDGTEITNEGVKYLAEADNLEELDL 276
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 34/307 (11%)
Query: 48 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 107
++++L+ L + G D+ ++ ++ L+ L L G+++ + L L LNL
Sbjct: 55 ENIEDLTTLTVSG---EDINIKGIEYAINLQELSLQGTKIED--VNTLAEVDNLEELNLN 109
Query: 108 WT-----GVTKLPNISSLECLNLSNCTIDSILEGNE---NKAPLAKISLAGTTFINEREA 159
+T G+ +L +L+ ++L++ D EG + L ++ L+GT ++
Sbjct: 110 YTEITDEGIEQLAEADNLKQISLTHT--DVTDEGTKLLAESESLERLILSGTEVTDDGLE 167
Query: 160 FLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
L IE L LD+ + ++ L + LE L L + + D+ +E + V NL
Sbjct: 168 HL-IEADNLKKLDLHGTDVTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVD-NLEV 225
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L L T + GV LA NLE+L L GT+I + + Y++ +L+ +D+ T
Sbjct: 226 LILGWTEVTDNGVEYLA-EADNLEMLHLDGTEITNEGVKYLAEADNLEELDLKQTK---- 280
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
V + AL + LE L+L T V+D + L+ L ++L +T+
Sbjct: 281 ----------VTDVNALAETDSLEELDLWDTDVTDEGVKELAEADSLKVVNLDETEVTNE 330
Query: 338 SLHQLSS 344
+ L
Sbjct: 331 GVEHLED 337
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL+ L+L T+ V LA + NLE L+L+ T+I D I ++ +LK I +++TD
Sbjct: 80 NLQELSLQGTKIED--VNTLA-EVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHTD 136
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ AE++ LERL L T+V+D L L L L L
Sbjct: 137 VTDEGTKLLAESE------------SLERLILSGTEVTDDGLEHLIEADNLKKLDLHGTD 184
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
+TD L+ L LS+ D +T+ G+ +L++L L GW D +++
Sbjct: 185 VTDDGAEHLAETDNLEKLSLVDTEVTDEGIEQLVKVDNLEVLIL--GWTEVTDNGVEYLA 242
Query: 394 MHPRIEVWH 402
+E+ H
Sbjct: 243 EADNLEMLH 251
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 214 NLRNLNLSNTRFSSAGVG-ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
++++ NL GV I ++ +L L++SG I+ I Y +L+ + + T
Sbjct: 33 DVQDENLKAAIKEELGVEQITEENIEDLTTLTVSGEDINIKGIEYA---INLQELSLQGT 89
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
I+ + L +++LE LNL T+++D + L+ L +SL +
Sbjct: 90 KIE--------------DVNTLAEVDNLEELNLNYTEITDEGIEQLAEADNLKQISLTHT 135
Query: 333 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+TD L+ L L + +T+ GL +LK LDLHG
Sbjct: 136 DVTDEGTKLLAESESLERLILSGTEVTDDGLEHLIEADNLKKLDLHG 182
>gi|290970571|ref|XP_002668179.1| predicted protein [Naegleria gruberi]
gi|284081412|gb|EFC35435.1| predicted protein [Naegleria gruberi]
Length = 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 172/404 (42%), Gaps = 46/404 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L +D+S ++ G K + + L L +S + +G +S +++L+ LD+ G
Sbjct: 132 MKQLTSVDISGN-RIGIEGAKSISEMKQLTSLNISNNIIGVEGAKSISGMKHLTSLDISG 190
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+ D ++S+ + +L LD+ + + GA + +L+ L++ + G +
Sbjct: 191 NRIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDIFYNRIGGEGAKLIS 250
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSFLDV 173
+ L LN+S ID + G+ I+E + L I +L+ V
Sbjct: 251 EMKQLTSLNISTNEID----------------VEGSKLISEMKQLTSLNISGNLIGVEGV 294
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ ++ MK L L++S ++IGD+ ++++ + L +L++ N R GV +
Sbjct: 295 KS--------ISGMKQLTSLNISGNLIGDEGAKLISEM-KQLTSLDIYNNRIGDEGVKSI 345
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVL 289
+ + L +S I D +S M L + ISN I G FI ++ T L +
Sbjct: 346 S-EMKQLTSFDISNNLIYDEGAKSISGMKQLTSLTISNNRIGGEGVKFISEIKQLTSLNI 404
Query: 290 SLTALQ--------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
S + + L L + + + D + +S K+L L + N + D +
Sbjct: 405 SKNEIDGEGAKFISGMKQLTSLTIYKNGIGDEGVKSISEMKQLTSLDISNNRIGDEGVKS 464
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+S + +L +L I V+ G + L LD+ G + E
Sbjct: 465 ISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDISGNLIYDE 508
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 157/351 (44%), Gaps = 29/351 (8%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ G K + + L L +S + +G L+S ++ L+ L++ G + ++S+
Sbjct: 240 RIGGEGAKLISEMKQLTSLNISTNEIDVEGSKLISEMKQLTSLNISGNLIGVEGVKSISG 299
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNC 128
+ +L L++ G+ + + GA ++ +L+ L++ GV + + L ++SN
Sbjct: 300 MKQLTSLNISGNLIGDEGAKLISEMKQLTSLDIYNNRIGDEGVKSISEMKQLTSFDISNN 359
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINER---EAFLYI-ETSLLSFLDVSNSSL--SRFC 182
I EG ++ + + + L T N R E +I E L+ L++S + +
Sbjct: 360 LIYD--EGAKSISGMKQ--LTSLTISNNRIGGEGVKFISEIKQLTSLNISKNEIDGEGAK 415
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F++ MK L L + + IGD+ V+ ++ + L +L++SN R GV ++ + L
Sbjct: 416 FISGMKQLTSLTIYKNGIGDEGVKSISEM-KQLTSLDISNNRIGDEGVKSIS-EMEQLIS 473
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L +S I ++S M L +DIS I G + ++ + L
Sbjct: 474 LDISTNVIGGEGAKFISEMKQLTSLDISGN----LIYDEGVK--------SISEMKQLTS 521
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LN+ Q+ +S K+L L + + D +S + +LT+L +
Sbjct: 522 LNISGNQIGVEGAKFISEMKQLTSLDISKNEIGDAGAKFISEMKQLTSLDV 572
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L++S+ ++ G K + + L L + + G+ +G+ +S ++ L+ LD+ +
Sbjct: 399 LTSLNISKN-EIDGEGAKFISGMKQLTSLTIYKNGIGDEGVKSISEMKQLTSLDISNNRI 457
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
D ++S+ + +L LD+ + + GA + +L+ L+++ GV + +
Sbjct: 458 GDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDISGNLIYDEGVKSISEMK 517
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L LN+S GN+ I + G FI+E + L+ LD+S + +
Sbjct: 518 QLTSLNIS---------GNQ-------IGVEGAKFISEMKQ--------LTSLDISKNEI 553
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDS 204
F+++MK L LD+ ++ I D++
Sbjct: 554 GDAGAKFISEMKQLTSLDVYANRISDEA 581
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S ++ D G+K + + L L +S + +G +S ++ L+ LD+ G
Sbjct: 444 MKQLTSLDISNN-RIGDEGVKSISEMEQLISLDISTNVIGGEGAKFISEMKQLTSLDISG 502
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 107
+ D ++S+ + +L L++ G+Q+ GA + +L+ L+++
Sbjct: 503 NLIYDEGVKSISEMKQLTSLNISGNQIGVEGAKFISEMKQLTSLDIS 549
>gi|384254255|gb|EIE27729.1| RNI-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 515
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 172/380 (45%), Gaps = 46/380 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+ LDLS C +TDA +K L +++ + L LS T + GI L S+ L L L G
Sbjct: 166 MKQLENLDLSWCSGITDADVKALAALTAITGLQLSRTLVADSGIFALRSMSRLRCLGLAG 225
Query: 61 LP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKL 114
+++ + S+ LT LE L+L VS +G + L L LN+A+T +
Sbjct: 226 CSGISNGAVGSVSALTSLEELNLEWCTVSVKGLSHLSTLTELRSLNVAYTTAGDNALAAW 285
Query: 115 PNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
++++L LNL +C + D L L ++L+ T ++ +++F
Sbjct: 286 TSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQ---------GMIAF--- 333
Query: 174 SNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
+K ++ L+LS ++ +GD + VA + A L L+L F+ G+
Sbjct: 334 -----------APLKGMQRLNLSYTAGVGDLGLAAVARLTA-LTELHLDGRSFTDVGLRT 381
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
+A L L+ L L G +I D ++ L+ ++I G I G + ++ LT
Sbjct: 382 IA-PLTQLQTLDLFGARITDAGCVHLRPFRRLERLEICG----GGISDEGVKE--LIWLT 434
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
LQ+L+ + +++D LS +L L+L LT + L SL+ L +L
Sbjct: 435 GLQHLSL-----AQNARITDRASLFLSGLSQLRGLNLTGTQLTGNGILPLRSLTNLESLC 489
Query: 353 IRDAVLTNSGLGSFKP--PR 370
++ + + +P PR
Sbjct: 490 LKRTRVKQAAADRLQPLLPR 509
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 16/193 (8%)
Query: 187 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
MK LE+LDLS S I D V+ +A + A + L LS T + +G+ L + L L L
Sbjct: 166 MKQLENLDLSWCSGITDADVKALAALTA-ITGLQLSRTLVADSGIFALR-SMSRLRCLGL 223
Query: 246 SG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
+G + I + A+ +S + SL+ +++ + V L+ L L L LN
Sbjct: 224 AGCSGISNGAVGSVSALTSLEELNLEWCTVS------------VKGLSHLSTLTELRSLN 271
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
+ T D L ++ L L+L + ++D LH +S L+ L ++++ D +T+ G+
Sbjct: 272 VAYTTAGDNALAAWTSLTNLRTLNLDSCPVSDRGLHHISELTNLEDVNLSDTAITDQGMI 331
Query: 365 SFKPPRSLKLLDL 377
+F P + ++ L+L
Sbjct: 332 AFAPLKGMQRLNL 344
>gi|290972542|ref|XP_002669011.1| predicted protein [Naegleria gruberi]
gi|284082551|gb|EFC36267.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 21/282 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L ++RC + D G ++ + ++ L E G+ + G + ++NL++L+L G +
Sbjct: 42 LTNLSINRC-SIADLGTNNISQLKQIKYLRACENGIGSIGARNIGEMKNLTLLELSGNRI 100
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D L S+ L+KL YLDL ++++++G L +L LNL +T L IS L+
Sbjct: 101 GDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITNLETISHLKLT 160
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINERE------AFLYIETSLLSFLDVSN-- 175
NL + T + I GNE +A++ IN+ L T L N
Sbjct: 161 NL-DVTTNKI--GNEGAKYIAEMKRLKVLRINDNHITSDGAKILSGMTQLTCIFLCDNLI 217
Query: 176 ---SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
+LS + + LE+LDL + I + ++ + C NLR L++S+ + S G
Sbjct: 218 GDEGALS----IGLLYNLEYLDLKGAGITGEGLKTI-CELINLRRLHVSHNQISDLGAKY 272
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
++G + NL L++ I ++S M SL +DI+ ++
Sbjct: 273 ISG-MNNLTALNVCDCNIGFEGAQFISNMQSLADLDITKNNL 313
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 159/359 (44%), Gaps = 47/359 (13%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
S L +L ++ + LT L++ L NL+ L + + DL ++ L +++YL +
Sbjct: 16 SKLTELCINSSELTPQSAHLIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENG 75
Query: 87 VSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKA 141
+ + GA + L+ L L+ G+ + +S L L+L EN
Sbjct: 76 IGSIGARNIGEMKNLTLLELSGNRIGDDGLESIGKLSKLAYLDLG-----------EN-- 122
Query: 142 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 201
+I+ G +N E + L++ N+ ++ ++ +K L +LD++++ IG
Sbjct: 123 ---EITDQGLKSLNNLEKLVT--------LNLKNNKITNLETISHLK-LTNLDVTTNKIG 170
Query: 202 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
++ + +A + L+ L +++ +S G IL+G + L + L I D + ++
Sbjct: 171 NEGAKYIAEM-KRLKVLRINDNHITSDGAKILSG-MTQLTCIFLCDNLIGDEGALSIGLL 228
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+L+++D+ I G L + L +L RL++ Q+SD +S
Sbjct: 229 YNLEYLDLKGAGITGE------------GLKTICELINLRRLHVSHNQISDLGAKYISGM 276
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG---SFKPPRSLKLLDL 377
L L++ + ++ +S++ L +L I LT +G+ + K + LK L +
Sbjct: 277 NNLTALNVCDCNIGFEGAQFISNMQSLADLDITKNNLTTNGIKLCRNMKTSKKLKYLKI 335
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-IQQVGAETDLVL-- 289
L L NL LS++ I D + +S + +K++ I + +G +L L
Sbjct: 35 LIAKLSNLTNLSINRCSIADLGTNNISQLKQIKYLRACENGIGSIGARNIGEMKNLTLLE 94
Query: 290 ---------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
L ++ L+ L L+L + +++D L L+ ++L+ L+L+N +T+ L
Sbjct: 95 LSGNRIGDDGLESIGKLSKLAYLDLGENEITDQGLKSLNNLEKLVTLNLKNNKITN--LE 152
Query: 341 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+S L KLTNL + + N G + LK+L ++ + ++ A
Sbjct: 153 TISHL-KLTNLDVTTNKIGNEGAKYIAEMKRLKVLRINDNHITSDGA 198
>gi|290977840|ref|XP_002671645.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
gi|284085215|gb|EFC38901.1| member of the leucine-rich repeat protein family [Naegleria
gruberi]
Length = 392
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GI-LAGHLPNL 240
+L++MK L +LD+S + IG+D + + C G +R L N ++ GV G+ G L L
Sbjct: 150 YLSKMKQLTYLDISHNKIGEDGSKFI-CNG--IRQLTHLNIYYNEIGVRGVKFIGALKQL 206
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
L++ G +I D I ++ M L ++ISN +I+ GA+ LV +T L NLN
Sbjct: 207 TSLNVGGNRIGDQGIEHLMRMHQLVDLNISNNNIR----VEGAK--LVSEMTQLTNLN-- 258
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
+ + + D +S K+LI L + L++ +S + LTNL IR +
Sbjct: 259 ----IRKNIIGDDGAKYISEMKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIRE 314
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 396
G + L L+L+G + +T++ I C ++
Sbjct: 315 EGAEFIGEMKQLTNLNLNGNY-ITDEGIKHLCGLYQ 349
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 32/260 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG----GLPVTDLVLRS 70
+ D G+ ++ +++ L KL +S ++++G LS ++ L+ LD+ G + +
Sbjct: 119 IGDIGVSYISNLTKLTKLNVSYNRISSEGAKYLSKMKQLTYLDISHNKIGEDGSKFICNG 178
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
++ LT +L+++ +++ RG + +L+ LN+ G+ L + L LN+
Sbjct: 179 IRQLT---HLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIGDQGIEHLMRMHQLVDLNI 235
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL------YI-ETSLLSFLDVSNSSL 178
SN I +EG A L + T +N R+ + YI E L LD+ + L
Sbjct: 236 SNNNIR--VEG----AKLVS-EMTQLTNLNIRKNIIGDDGAKYISEMKQLIKLDIGKNYL 288
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG- 235
S ++++MK L +LD+ S+ I ++ E + + L NLNL+ + G+ L G
Sbjct: 289 SNRGAKYISEMKYLTNLDIRSNNIREEGAEFIGEM-KQLTNLNLNGNYITDEGIKHLCGL 347
Query: 236 -HLPNLEILSLSGTQIDDYA 254
L +L I + +G Q++D A
Sbjct: 348 YQLVSLSIYN-TGIQMEDGA 366
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 209 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 268
A + L +L++ GV ++ +L L L++S +I Y+S M L ++D
Sbjct: 103 AMMKNRLVDLDMKMNNIGDIGVSYIS-NLTKLTKLNVSYNRISSEGAKYLSKMKQLTYLD 161
Query: 269 ISNTDI-----KGFIQQVGAETDL--------VLSLTALQNLNHLERLNLEQTQVSDATL 315
IS+ I K + T L V + + L L LN+ ++ D +
Sbjct: 162 ISHNKIGEDGSKFICNGIRQLTHLNIYYNEIGVRGVKFIGALKQLTSLNVGGNRIGDQGI 221
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
L +L+ L++ N ++ +S +++LTNL+IR ++ + G + L L
Sbjct: 222 EHLMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISEMKQLIKL 281
Query: 376 DLHGGWLLTEDA 387
D+ +L A
Sbjct: 282 DIGKNYLSNRGA 293
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G++HL+ + L L +S + +G L+S + L+ L++ + D + +
Sbjct: 215 RIGDQGIEHLMRMHQLVDLNISNNNIRVEGAKLVSEMTQLTNLNIRKNIIGDDGAKYISE 274
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS 126
+ +L LD+ + +SNRGA + L+ L N+ G + + L LNL+
Sbjct: 275 MKQLIKLDIGKNYLSNRGAKYISEMKYLTNLDIRSNNIREEGAEFIGEMKQLTNLNLN 332
>gi|348682865|gb|EGZ22681.1| hypothetical protein PHYSODRAFT_491927 [Phytophthora sojae]
Length = 648
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 170/384 (44%), Gaps = 30/384 (7%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 60
T L L+LS CV V D +K L + L L L LT G+ L+ + L L +
Sbjct: 251 TKLAALNLSGCVNVDDKSLKALSELEQLTSLQLVGCRKLTDKGVKYLAKMAKLEKLRIAR 310
Query: 61 L-PVTDLVLRSLQVL-TKLEYLDLWGSQVSNRGAAVLKMFPRLSFL------NLAWTGVT 112
+TD L ++ KL LD+ ++S + + L L ++ G++
Sbjct: 311 CRKLTDAALEDFAMMFPKLRELDVANCRLSEKALQYIGQIKSLEVLVIRGCQDICDDGMS 370
Query: 113 KLPNISSLECLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L +++L+ + +C+ I SI + ++ L G T E +A + + L L
Sbjct: 371 SLSGLANLKYFDARHCSKIHSI----PTEWTQLEVLLLGYTAFAESDAAVLQYLTNLHEL 426
Query: 172 DVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
++ + + F F++++ LE L+L + + D + + +L+ LN+SNT S G
Sbjct: 427 ELRKCRIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNISNTEISDNG 486
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDL 287
LA L L IL L I + A++ +S + L+ +D+ +I G + V
Sbjct: 487 AAGLA-KLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQ 545
Query: 288 VLSLTA----------LQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTD 336
LS+ + L L LNL Q + + +LF L L L+L N ++
Sbjct: 546 ELSICGGNIGDRGVGLISKLTSLTSLNLSQNRNIRTKSLFYLRALTGLRCLNLSNTGISA 605
Query: 337 VSLHQLSSLSKLTNLSIRDAVLTN 360
+SL LSSL +L +LS+ L+
Sbjct: 606 LSLRHLSSLKELQSLSVYGCSLSQ 629
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 168/408 (41%), Gaps = 86/408 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLG 59
LK +D+S C+ + G + + + L +L + TGLT + I +L L+ L+L
Sbjct: 200 LKSIDVSGCIHLHQLGAEWGYATTKLPELLAASFQGCTGLTKESIEMLRFSTKLAALNLS 259
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
G + V D L++L L +L L L G + L GV L ++
Sbjct: 260 GCVNVDDKSLKALSELEQLTSLQLVGCR------------------KLTDKGVKYLAKMA 301
Query: 119 SLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
LE L ++ C D+ LE F RE LDV+N
Sbjct: 302 KLEKLRIARCRKLTDAALED------------FAMMFPKLRE------------LDVANC 337
Query: 177 SLSR--FCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLN-------------- 219
LS ++ Q+K+LE L + I DD + ++ + ANL+ +
Sbjct: 338 RLSEKALQYIGQIKSLEVLVIRGCQDICDDGMSSLSGL-ANLKYFDARHCSKIHSIPTEW 396
Query: 220 -------LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L T F+ + +L +L NL L L +I ++S + L+ +++ T
Sbjct: 397 TQLEVLLLGYTAFAESDAAVLQ-YLTNLHELELRKCRIMKRGFQFISRLTHLERLELGET 455
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
A TD L L + L+ LN+ T++SD L+ KEL L L
Sbjct: 456 ----------ALTDSGL-LEICNSAKSLKALNISNTEISDNGAAGLAKLKELRILRLDTP 504
Query: 333 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
+T+ +L LS L++L L + A +T++GL P L+ L + GG
Sbjct: 505 GITNRALANLSFLARLERLDLFGANITDNGLMHLVPLHKLQELSICGG 552
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI---------------- 44
+T L EL+L +C ++ G + + ++ LE+L L ET LT G+
Sbjct: 420 LTNLHELELRKC-RIMKRGFQFISRLTHLERLELGETALTDSGLLEICNSAKSLKALNIS 478
Query: 45 ---------ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 95
A L+ L+ L +L L +T+ L +L L +LE LDL+G+ +++ G L
Sbjct: 479 NTEISDNGAAGLAKLKELRILRLDTPGITNRALANLSFLARLERLDLFGANITDNGLMHL 538
Query: 96 KMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSN 127
+L L N+ GV + ++SL LNLS
Sbjct: 539 VPLHKLQELSICGGNIGDRGVGLISKLTSLTSLNLSQ 575
>gi|290974964|ref|XP_002670214.1| predicted protein [Naegleria gruberi]
gi|284083770|gb|EFC37470.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 34/281 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK LD+S ++ D G K + + L L + + G+ ++ +++L+ LD+ G
Sbjct: 126 MKQLKSLDISEN-RIGDEGAKFISEMKQLTSLDIGYNRIGVVGVKFINEMKHLTSLDISG 184
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLP 115
+ D ++S+ L +L LD +++ ++GA + L+ L ++ G +
Sbjct: 185 NGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINNNHIGAEGARFIS 244
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L+ L++ N I G+E G FINE + L+ LD+S
Sbjct: 245 EMKQLKSLSIYNNQI-----GDE-----------GAKFINEMKQ--------LTSLDISG 280
Query: 176 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ + +++MK L L++ + IGD+ ++++ + L +LN+ N + G +
Sbjct: 281 NEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLISEM-KQLISLNIYNNQIGIEGAKFI 339
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
+ + L+ L + G QI D + ++S M L +DI +I
Sbjct: 340 S-EMKQLKSLYIGGNQIGDEGVKFISEMKQLTSLDIGYNEI 379
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F+T+MK L+ LD+S + IGD+ + ++ + L +L++ R GV + + +L
Sbjct: 122 FITEMKQLKSLDISENRIGDEGAKFISEM-KQLTSLDIGYNRIGVVGVKFI-NEMKHLTS 179
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L +SG I D + +S + L +D +N I GA++ + + HL
Sbjct: 180 LDISGNGIGDEGVKSISELKQLTSLDFNNNRIG----DKGAKS--------ISEMKHLTL 227
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L++ + +S K+L LS+ N + D ++ + +LT+L I + G
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNNQIGDEGAKFINEMKQLTSLDISGNEIGVEG 287
Query: 363 LGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+ + L L++ G + E A L
Sbjct: 288 VIPISEMKQLTSLEIGGNQIGDEGAKL 314
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F+ +MK L LD+S + IGD+ V+ ++ + L +L+ +N R G ++ + +L +
Sbjct: 170 FINEMKHLTSLDISGNGIGDEGVKSISEL-KQLTSLDFNNNRIGDKGAKSIS-EMKHLTL 227
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
LS++ I ++S M LK + I N Q+G E + + L
Sbjct: 228 LSINNNHIGAEGARFISEMKQLKSLSIYNN-------QIGDE-----GAKFINEMKQLTS 275
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L++ ++ + P+S K+L L + + D +S + +L +L+I + + G
Sbjct: 276 LDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLISEMKQLISLNIYNNQIGIEG 335
Query: 363 LGSFKPPRSLKLLDLHGGWLLTE 385
+ LK L + G + E
Sbjct: 336 AKFISEMKQLKSLYIGGNQIGDE 358
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 145 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGD 202
+I + G FINE + L+ LD+S + + ++++K L LD +++ IGD
Sbjct: 162 RIGVVGVKFINEMKH--------LTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGD 213
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
+ ++ + +L L+++N + G ++ + L+ LS+ QI D +++ M
Sbjct: 214 KGAKSISEM-KHLTLLSINNNHIGAEGARFIS-EMKQLKSLSIYNNQIGDEGAKFINEMK 271
Query: 263 SLKFIDISNTDI--KGFI---------------QQVGAETDLVLSLTALQNLNHLERLNL 305
L +DIS +I +G I Q+G E ++S + L LN+
Sbjct: 272 QLTSLDISGNEIGVEGVIPISEMKQLTSLEIGGNQIGDEGAKLIS-----EMKQLISLNI 326
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
Q+ +S K+L L + + D + +S + +LT+L I
Sbjct: 327 YNNQIGIEGAKFISEMKQLKSLYIGGNQIGDEGVKFISEMKQLTSLDI 374
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 19/185 (10%)
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
+ L+ L +S +I D ++S M L +DI G+ ++G V+ + +
Sbjct: 125 EMKQLKSLDISENRIGDEGAKFISEMKQLTSLDI------GY-NRIG-----VVGVKFIN 172
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+ HL L++ + D + +S K+L L N + D +S + LT LSI +
Sbjct: 173 EMKHLTSLDISGNGIGDEGVKSISELKQLTSLDFNNNRIGDKGAKSISEMKHLTLLSINN 232
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 415
+ G + LK L ++ + E A +F E+ S+ ++IG
Sbjct: 233 NHIGAEGARFISEMKQLKSLSIYNNQIGDEGA--KFIN-----EMKQLTSLDISGNEIGV 285
Query: 416 NGPSP 420
G P
Sbjct: 286 EGVIP 290
>gi|46447250|ref|YP_008615.1| hypothetical protein pc1616 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400891|emb|CAF24340.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 813
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 200/426 (46%), Gaps = 61/426 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG---------------------- 38
+T L+ LDLS C + D G+ HL S++ L+ L LS++G
Sbjct: 377 LTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTDAGLAHLTPLVSLQHLDLS 436
Query: 39 ----LTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGA 92
LT DG+A L+ L L L L +TD L L L L +LDL + +++ G
Sbjct: 437 KSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKNLTDDGL 496
Query: 93 AVLKMFPRLSFL------NLAWTGVTKLPNISSLECLNLS---NCTIDSILEGNENKAPL 143
L L +L NL G+ L +++LE L+L C + +G + + L
Sbjct: 497 VHLSSLVALQYLSLKLCENLTDAGLAHLTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSL 556
Query: 144 AKISLAGTTFI-NEREAFLYIETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLSS 197
+ ++ N +A L T L L LD+S N + +LT + AL++L L
Sbjct: 557 TALKHLDLSWRENLTDAGLAHLTPLTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKG 616
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYAI 255
S I D+ +E +A + A LR+L+L++ R + G+ L L NLE L LSG + + +
Sbjct: 617 SDITDEGLEHLAHLSA-LRHLSLNDCRRINGYGLAHLTS-LVNLEHLDLSGCYHLPSFQL 674
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
Y+S + +L+ +++S + G D + LT L NL +L+ ++D L
Sbjct: 675 IYLSSLVNLQHLNLS--------ECFGLCHDGLEDLTPLMNLQYLDLSGC--INLTDQGL 724
Query: 316 FPLSTFK--ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRS 371
L++ +L HL L +TD L L+SL L +L++ + V LT++GL +
Sbjct: 725 AYLTSLVGLDLQHLDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLVN 784
Query: 372 LKLLDL 377
L+ L+L
Sbjct: 785 LQYLEL 790
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 183/400 (45%), Gaps = 57/400 (14%)
Query: 12 CVKV----TDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG-GLPVTD 65
C+K+ D G+ HL S++ L+ L LSE L D G+A LSSL L LDL TD
Sbjct: 359 CLKIFYTPIDTGLAHLTSLTALQHLDLSECYLLKDTGLAHLSSLTALQYLDLSDSGNFTD 418
Query: 66 LVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNIS 118
L L L L++LDL S+ ++ G A L L L NL G+ L +
Sbjct: 419 AGLAHLTPLVSLQHLDLSKSENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLV 478
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L L+LS C ++ G ++ A Y+ L +++++ L
Sbjct: 479 ALRHLDLSEC---------------KNLTDDGLVHLSSLVALQYLSLKLCE--NLTDAGL 521
Query: 179 SRFCFLTQMKALEHLDLSSSM-----IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGI 232
+ LT + LEHLDL + + DD + ++ + A L++L+LS + AG+
Sbjct: 522 AH---LTPLTTLEHLDLGLDLGCCHNLTDDGLAHLSSLTA-LKHLDLSWRENLTDAGLAH 577
Query: 233 LAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
L L L L LS + + D ++Y++ + +L+++ + +DI TD L
Sbjct: 578 LTP-LTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDI----------TD--EGL 624
Query: 292 TALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLT 349
L +L+ L L+L +++ L L++ L HL L L L LSSL L
Sbjct: 625 EHLAHLSALRHLSLNDCRRINGYGLAHLTSLVNLEHLDLSGCYHLPSFQLIYLSSLVNLQ 684
Query: 350 NLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+L++ + L + GL P +L+ LDL G LT+ +
Sbjct: 685 HLNLSECFGLCHDGLEDLTPLMNLQYLDLSGCINLTDQGL 724
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 44/259 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLD 57
+T L+ LDLS C +TD G+ +L + L+ L L + +T +G +A LS+L++LS+ D
Sbjct: 581 LTALRHLDLSWCENLTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLND 640
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
+ L L L LE+LDL G P + L+ ++
Sbjct: 641 CR--RINGYGLAHLTSLVNLEHLDLSGCY----------HLPSFQLIYLS--------SL 680
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKIS---LAGTTFINEREAFLYIETSL----LSF 170
+L+ LNLS C +G E+ PL + L+G IN + L TSL L
Sbjct: 681 VNLQHLNLSEC-FGLCHDGLEDLTPLMNLQYLDLSGC--INLTDQGLAYLTSLVGLDLQH 737
Query: 171 LDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTR- 224
LD+S + + LT + L+HL+LS + D+ +V+ V NL+ L L +
Sbjct: 738 LDLSGCKKITDTGLAHLTSLVTLQHLNLSECVNLTDTGLAHLVSLV--NLQYLELRECKN 795
Query: 225 FSSAGVGILAGHLPNLEIL 243
+ AG LA ++ N +I+
Sbjct: 796 ITDAG---LAHYIQNQQII 811
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMMPSLKFIDISNT 272
+ LNLS F + + + NL++L L T ID +++++ + +L+ +D+S
Sbjct: 330 IEGLNLSGKDFFTEAHFLALKNCKNLKVLCLKIFYTPIDT-GLAHLTSLTALQHLDLSEC 388
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 331
+ ++ G + SLTALQ L+ + N +DA L L+ L HL L ++
Sbjct: 389 YL---LKDTGLAH--LSSLTALQYLDLSDSGNF-----TDAGLAHLTPLVSLQHLDLSKS 438
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 390
+LT L L+ L L +L + D LT++GL P +L+ LDL LT+D ++
Sbjct: 439 ENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHLTPLVALRHLDLSECKNLTDDGLVH 498
Query: 391 F 391
Sbjct: 499 L 499
>gi|421897032|ref|ZP_16327415.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
gi|206588197|emb|CAQ18765.1| type III effector gala6 protein [Ralstonia solanacearum MolK2]
Length = 625
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 159/360 (44%), Gaps = 27/360 (7%)
Query: 4 LKELDLSRCVK--VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LD+SRC V++AG+ HL + L+ L L+ + A+G LL++ +L+ L L G
Sbjct: 163 VEHLDISRCTGRGVSNAGLAHL-ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGC 221
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPN 116
+ D +L + LDL + + GA L P LS LNL G+ L
Sbjct: 222 SIGDRAATALAQSRSIASLDLSVNMIGPDGARALASAPLLS-LNLHNNGIGDEGALALAT 280
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+L+ LN SN I D+ + G + L +++LAG I A + L+ LD+S
Sbjct: 281 SGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLST 339
Query: 176 SSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ L L ++L L+L + IGDD E +A L++LNLS G G L
Sbjct: 340 NRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALA-RNTTLKSLNLSYNPIGFWGAGAL 398
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
G L L L ID Y S ++ SL + + + I GA A
Sbjct: 399 GGST-TLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIG----DDGAR--------A 445
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L L+L + + DA L+ L L+L + D L+ +LT+L++
Sbjct: 446 LATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNL 505
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ELDL RC + G L ++L L L + DG L++ + L++LDL
Sbjct: 402 TTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTLLDLSRN 460
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ D ++L L L+L+G++V + GAA L PRL+ LNL G L
Sbjct: 461 NIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNGAQHLAK 520
Query: 117 ISSLECLNLSNCTIDSILEGNEN---KAPLAKISLAGTTFINEREAFLYIETSL-LSFLD 172
++L L+LS I EG E L ++++G I E+ A + E S L+ LD
Sbjct: 521 SATLTELDLSENRIGP--EGAEALSLSTVLTTLNVSGNA-IGEKGARAFAEKSTSLTSLD 577
Query: 173 VSNS 176
N+
Sbjct: 578 ARNN 581
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 33/267 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 270 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRN 329
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
T L LDL +++ + GA VL L+ LNL G L ++L+ LNLS
Sbjct: 330 TSLTELDLSTNRLGDAGAQVLAGSRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNP 389
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQM 187
I G +L G+T + E LD+ ++ + L +
Sbjct: 390 IGFWGAG----------ALGGSTTLRE--------------LDLRCCAIDPYGASALARN 425
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+L L L S+ IGDD +A L L+LS AG LAG+ +L L+L G
Sbjct: 426 TSLASLHLGSNRIGDDGARALA-TSRTLTLLDLSRNNIHDAGAQALAGN-GSLTSLNLYG 483
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDI 274
++DD + ++ P L +++ I
Sbjct: 484 NEVDDDGAAALAQHPRLTSLNLGRNRI 510
>gi|290982526|ref|XP_002673981.1| predicted protein [Naegleria gruberi]
gi|284087568|gb|EFC41237.1| predicted protein [Naegleria gruberi]
Length = 363
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 175/375 (46%), Gaps = 38/375 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L L++S +++ G K++ + L L +S + G +S ++ L+ L++
Sbjct: 1 MKQLTSLNVSNN-QISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFN 59
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNIS 118
++D + + + +L LD+ +Q+ GA + +L+ LN+++ ++ IS
Sbjct: 60 NRISDEGAKYISEMKQLISLDISYNQIGAEGAKFISEMKQLTSLNISYNEISDEGAKYIS 119
Query: 119 SLECLNLSNCTIDSILEGNENKAPLA-------------KISLAGTTFINEREAFLYIET 165
++ L N + + I EG P++ +IS G +I+E +
Sbjct: 120 EMKQLTSLNISYNDISEG---AKPISEMKQLTSLNVSNNQISGKGAKYISEMKQ------ 170
Query: 166 SLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L+ L++S++ +S ++ +MK L LD+S++ I D+ + ++ + L +LN+SN
Sbjct: 171 --LTSLNISDNQISGKGAKYIGEMKQLTSLDISNNQISDEGAKFLSEM-KQLISLNVSNN 227
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQ 279
+ S ++ + L L++S QI D Y+S M L +DI N I +I
Sbjct: 228 QISGKEAKFMS-EMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAKYIS 286
Query: 280 QVGAETDLVLSLTALQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
++ T L +S + +++ +++ LN+ Q++D +S K+L L + +
Sbjct: 287 EMKHLTSLDISYNEISHISEMKQLTSLNISFNQINDEGAKSISEMKQLTSLDMSYNRIGG 346
Query: 337 VSLHQLSSLSKLTNL 351
+S + LT+L
Sbjct: 347 EGAKYISEMKHLTSL 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 40/320 (12%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSNC 128
+ +L L++ +Q+S +GA + +L+ LN++ G + + L LN+ N
Sbjct: 1 MKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNN 60
Query: 129 TIDSILEGNENKAPLAK----------ISLAGTTFINEREAFLYIETSL-LSFLDVSNSS 177
I EG + + + + I G FI+E + TSL +S+ ++S+
Sbjct: 61 RISD--EGAKYISEMKQLISLDISYNQIGAEGAKFISEMKQL----TSLNISYNEISDEG 114
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
++++MK L L++S + I + + + L +LN+SN + S G ++ +
Sbjct: 115 AK---YISEMKQLTSLNISYNDISEGAKPISEM--KQLTSLNVSNNQISGKGAKYIS-EM 168
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L L++S QI Y+ M L +DISN Q+ E LS +
Sbjct: 169 KQLTSLNISDNQISGKGAKYIGEMKQLTSLDISNN-------QISDEGAKFLS-----EM 216
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L LN+ Q+S +S K+L L++ N ++D +S + +LT+L I + +
Sbjct: 217 KQLISLNVSNNQISGKEAKFMSEMKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNL 276
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
+++ G + L LD+
Sbjct: 277 ISDEGAKYISEMKHLTSLDI 296
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 146/313 (46%), Gaps = 26/313 (8%)
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 105
++ L+ L++ ++ + + + +L L++ +++ +GA + +L+ LN
Sbjct: 1 MKQLTSLNVSNNQISGKGAKYISEMKQLTSLNISNNRIGGKGAKYISEMKQLTSLNIFNN 60
Query: 106 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE--REAFLY 162
++ G + + L L++S I + EG + + + +++ ++ NE E Y
Sbjct: 61 RISDEGAKYISEMKQLISLDISYNQIGA--EGAKFISEMKQLTSLNISY-NEISDEGAKY 117
Query: 163 I-ETSLLSFLDVSNSSLSRFCF-LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
I E L+ L++S + +S +++MK L L++S++ I + ++ + L +LN+
Sbjct: 118 ISEMKQLTSLNISYNDISEGAKPISEMKQLTSLNVSNNQISGKGAKYISEM-KQLTSLNI 176
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
S+ + S G + G + L L +S QI D ++S M L +++SN I G +
Sbjct: 177 SDNQISGKGAKYI-GEMKQLTSLDISNNQISDEGAKFLSEMKQLISLNVSNNQISGKEAK 235
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+E + L LN+ Q+SD +S K+L L + N ++D
Sbjct: 236 FMSE------------MKQLTSLNISNNQISDERAKYISEMKQLTSLDIFNNLISDEGAK 283
Query: 341 QLSSLSKLTNLSI 353
+S + LT+L I
Sbjct: 284 YISEMKHLTSLDI 296
>gi|410684076|ref|YP_006060083.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
gi|299068565|emb|CBJ39793.1| leucine-rich-repeat type III effector protein (GALA1-like)
[Ralstonia solanacearum CMR15]
Length = 555
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 162/379 (42%), Gaps = 58/379 (15%)
Query: 4 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
LK LDLSRC + +T AG+ HL + L +L + + +G LL++ L+ L++
Sbjct: 156 LKALDLSRCGRQITAAGIAHLSELP-LAELNVRNNWIGDEGARLLAAHPTLTTLNVASNG 214
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ D ++L T+LE LD+ SF + GV L + ++L+
Sbjct: 215 IGDAGAQALAANTRLESLDI-------------------SFNEIGSDGVQALADNATLKT 255
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
LN+S+ I ++LA T + E + TS D +L+
Sbjct: 256 LNISSNDIGDA----------GALALAVNTTLTE------LNTSCNRISDAGAQALANSD 299
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
LT LD+S + GD V+ +A LR L++S R S AGV +A + L
Sbjct: 300 SLTS------LDISDNGFGDAGVQAIA-ANTRLRRLDISRNRLSEAGVLAVAANT-TLTK 351
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L ++ +I ++ L +D + I G E L+ A L++
Sbjct: 352 LCIADCEIGTAGAQALAANTRLVSLDAGHNGI-------GTEGAQALARHAT-----LKQ 399
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNLE+ + DA + L L+L+ +TD L L++ + L L++ D +T G
Sbjct: 400 LNLEKNPIGDAGAVAFADNATLRSLNLKGCKVTDSGLRVLATNATLRTLNVSDNRITAEG 459
Query: 363 LGSFKPPRSLKLLDL-HGG 380
+ +L LD+ H G
Sbjct: 460 AKATAANSTLTSLDVSHNG 478
>gi|168698162|ref|ZP_02730439.1| hypothetical protein GobsU_01482 [Gemmata obscuriglobus UQM 2246]
Length = 295
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 145/352 (41%), Gaps = 79/352 (22%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R ++VTDAG+K L ++ L +L L T +T G+ L+ L+NL+ LDLG VTD L++
Sbjct: 8 RDLQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTDAGLKA 67
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
L LT L L L + V++ G L F L L L T VT + E N T+
Sbjct: 68 LAPLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKVT---DAGLKELGRFKNLTV 124
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L GT D L RF LT
Sbjct: 125 ---------------LGLGGT-----------------GVTDAGLRELGRFKNLTA---- 148
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
L LS T + AG+ LA L NL L L GT +
Sbjct: 149 ---------------------------LGLSGTGVTDAGLKELA-PLKNLTELGLGGTGV 180
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D + ++ +L +D+ +T + TD L L L +L L+L +TQV
Sbjct: 181 ADVGLKELAPFKNLAKLDLYSTKV----------TD--AGLKELGLLKNLTLLDLGRTQV 228
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+D L L+ K L L L +TD L +L+ L+ LT L++ +T++G
Sbjct: 229 TDDGLRELTGLKALTTLILIGTGVTDAGLKELAGLTNLTRLNLYRTKVTDAG 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG+K L+ +L+ L+L T +T G+ L +NL+VL LGG VTD LR L
Sbjct: 84 VTDAGLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGGTGVTDAGLRELGRF 143
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L L L G+ V++ G L L+ L L TGV + NL+ + S
Sbjct: 144 KNLTALGLSGTGVTDAGLKELAPLKNLTELGLGGTGVADVGLKELAPFKNLAKLDLYS-- 201
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
K++ AG + E + L V++ L LT +KAL L
Sbjct: 202 ---------TKVTDAG---LKELGLLKNLTLLDLGRTQVTDDGLRE---LTGLKALTTLI 246
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L + + D ++ +A + NL LNL T+ + AG L LP EI
Sbjct: 247 LIGTGVTDAGLKELAGL-TNLTRLNLYRTKVTDAGWKELKSALPKCEI 293
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
L V+++ L LT L L L + + D +E +A + NL L+L T+ + AG+
Sbjct: 10 LQVTDAGLKELAGLTN---LTQLILLGTAVTDVGLEELAPL-KNLNTLDLGKTKVTDAGL 65
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
LA L L L+L T + D + + SLK + + +T + TD
Sbjct: 66 KALA-PLTGLTRLALGDTGVTDAGLKELVPFKSLKTLYLFSTKV----------TDA--G 112
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L +L L L T V+DA L L FK L L L +TD L +L+ L LT
Sbjct: 113 LKELGRFKNLTVLGLGGTGVTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTE 172
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
L + + + GL P ++L LDL+
Sbjct: 173 LGLGGTGVADVGLKELAPFKNLAKLDLY 200
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL L L T + G+ LA L NL L L T++ D + ++ + L + + +T
Sbjct: 25 NLTQLILLGTAVTDVGLEELA-PLKNLNTLDLGKTKVTDAGLKALAPLTGLTRLALGDTG 83
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ TD L L L+ L L T+V+DA L L FK L L L
Sbjct: 84 V----------TDA--GLKELVPFKSLKTLYLFSTKVTDAGLKELGRFKNLTVLGLGGTG 131
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+TD L +L LT L + +T++GL P ++L L L G
Sbjct: 132 VTDAGLRELGRFKNLTALGLSGTGVTDAGLKELAPLKNLTELGLGG 177
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 55/318 (17%)
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
L VTD L+ L LT L L L G+ V++ G L L+ L+L T VT + L
Sbjct: 10 LQVTDAGLKELAGLTNLTQLILLGTAVTDVGLEELAPLKNLNTLDLGKTKVTD----AGL 65
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+ L APL ++ R A L V+++ L
Sbjct: 66 KAL-----------------APLTGLT---------RLA--------LGDTGVTDAGLKE 91
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L K+L+ L L S+ + D ++ + NL L L T + AG+ L G NL
Sbjct: 92 ---LVPFKSLKTLYLFSTKVTDAGLKELGRF-KNLTVLGLGGTGVTDAGLREL-GRFKNL 146
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
L LSGT + D + ++ + +L + + T + VG L L +L
Sbjct: 147 TALGLSGTGVTDAGLKELAPLKNLTELGLGGTGV----ADVG--------LKELAPFKNL 194
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
+L+L T+V+DA L L K L L L +TD L +L+ L LT L + +T+
Sbjct: 195 AKLDLYSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGVTD 254
Query: 361 SGLGSFKPPRSLKLLDLH 378
+GL +L L+L+
Sbjct: 255 AGLKELAGLTNLTRLNLY 272
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LDL KVTDAG+K L + L L L T +T DG+ L+ L+ L+ L L G V
Sbjct: 194 LAKLDL-YSTKVTDAGLKELGLLKNLTLLDLGRTQVTDDGLRELTGLKALTTLILIGTGV 252
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TD L+ L LT L L+L+ ++V++ G LK
Sbjct: 253 TDAGLKELAGLTNLTRLNLYRTKVTDAGWKELK 285
>gi|386333663|ref|YP_006029833.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334196112|gb|AEG69297.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 629
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 160/360 (44%), Gaps = 27/360 (7%)
Query: 4 LKELDLSRCVK--VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LD+SRC V++AG+ LL+ L+ L L+ + A+G LL++ +L+ L L G
Sbjct: 167 VEHLDISRCTGSGVSNAGLA-LLATRPLKSLSLNGIEIDAEGARLLATCTSLTSLSLTGC 225
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPN 116
+ D +L + LDL + + GA L P L+ LNL G+ L
Sbjct: 226 SIGDRAATALARSRSIASLDLSVNMIGPDGARALAGAP-LASLNLHNNGIGDEGALALAT 284
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+L+ LN SN I D+ + G + A L +++LAG L TS L+ LD+S
Sbjct: 285 SGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMIGPAGARALRCNTS-LTELDLST 343
Query: 176 SSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ L L ++L L+L + IGDD E +A L++LNLS G G L
Sbjct: 344 NRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALA-RNTTLKSLNLSYNPIGFWGAGAL 402
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
G L L L ID Y S ++ SL + + + I GA A
Sbjct: 403 GGST-TLRELDLRCCAIDPYGASALARNTSLASLHLGSNRIG----DSGAR--------A 449
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ L L+L + + DA L+ L L+L + D L+ +LT+L++
Sbjct: 450 IATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNL 509
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ELDL RC + G L ++L L L + G +++ + L++LDL
Sbjct: 406 TTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDSGARAIATSRTLTLLDLSRN 464
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ D ++L L L+L+G++V + GAA L PRL+ LNL G L
Sbjct: 465 NIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAHHPRLTSLNLGRNRIGPNGAQHLAK 524
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF------INEREAFLYIETSL-LS 169
++L L+LS I G E L+ +S TT I E+ A + E S L+
Sbjct: 525 SATLTELDLSENRI-----GPEGADALS-LSTVLTTLNVSDNAIGEKGARAFAEKSTSLT 578
Query: 170 FLDVSNSSL 178
LD N+ +
Sbjct: 579 SLDARNNGM 587
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 33/267 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 274 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNAVLTQLNLAGNMIGPAGARALRCN 333
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
T L LDL +++ + GA VL L+ LNL G L ++L+ LNLS
Sbjct: 334 TSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTLKSLNLSYNP 393
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQM 187
I G +L G+T + E LD+ ++ + L +
Sbjct: 394 IGFWGAG----------ALGGSTTLRE--------------LDLRCCAIDPYGASALARN 429
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+L L L S+ IGD +A L L+LS AG LAG+ +L L+L G
Sbjct: 430 TSLASLHLGSNRIGDSGARAIA-TSRTLTLLDLSRNNIHDAGAQALAGN-GSLTSLNLYG 487
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDI 274
++DD + ++ P L +++ I
Sbjct: 488 NEVDDDGAAALAHHPRLTSLNLGRNRI 514
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 33/270 (12%)
Query: 120 LECLNLSNCTIDSILEGNENKA-----PLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+E L++S CT + N A PL +SL G E L TSL S L ++
Sbjct: 167 VEHLDISRCTGSGV--SNAGLALLATRPLKSLSLNGIEIDAEGARLLATCTSLTS-LSLT 223
Query: 175 NSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
S+ L + +++ LDLS +MIG D +A GA L +LNL N G
Sbjct: 224 GCSIGDRAATALARSRSIASLDLSVNMIGPDGARALA--GAPLASLNLHNNGIGDEGALA 281
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID---ISNTDIKG-FIQQVGAETDLV 288
LA L+ L+ S I D + L F D ++ ++ G I GA
Sbjct: 282 LATS-GTLKSLNASNNGIGDAGV--------LGFADNAVLTQLNLAGNMIGPAGAR---- 328
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
AL+ L L+L ++ DA L+ + L L+LR+ + D L+ + L
Sbjct: 329 ----ALRCNTSLTELDLSTNRLGDAGAQVLAANRSLTSLNLRHNEIGDDGTEALARNTTL 384
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+L++ + G G+ +L+ LDL
Sbjct: 385 KSLNLSYNPIGFWGAGALGGSTTLRELDLR 414
>gi|46447653|ref|YP_009018.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401294|emb|CAF24743.1| hypothetical protein pc2019 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 959
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 201/415 (48%), Gaps = 43/415 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG--G 60
L+ L+L+ C K+TDAG+ HL S+ TL L LS+ LT G+A L+ L L LDL
Sbjct: 418 LQGLNLNGCKKLTDAGLVHLKSLVTLTYLNLSQCDDLTDAGLAHLTPLVALQHLDLSFCC 477
Query: 61 LPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW-------TGVT 112
+TD L L L L+ LDL + ++++ G A LK L LNL W G+
Sbjct: 478 YNITDAGLAHLTPLVALQNLDLSFCYKLTDDGLAHLKPLVALKQLNL-WACSNLTGAGLA 536
Query: 113 KLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
L + +L+ L+L C D L + L +SL+G + +A L TSL++
Sbjct: 537 HLTPLIALKHLDLGFCYGLTDDGLAHLKPLVALQYLSLSGCKKL--TDAGLAHLTSLITL 594
Query: 171 LDVSNSSLSR-----FCFLTQMKALEHLDLSS--SMIGDDSVEMVACVGANLRNLNLSNT 223
++ SS + L + AL+ L+LSS + G + + V NL +L+LS
Sbjct: 595 QQLNISSCANLTDDGLAHLKPLIALQQLNLSSCKKLTGVGLAHLTSLV--NLTHLSLSEC 652
Query: 224 -RFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ AG+ LA L L+ L L+ + D ++++ + +L+ + ++
Sbjct: 653 GNLTDAGLAHLAP-LVALQQLDLNFCYNLTDAGLAHLITLVALQQL---------YLSAC 702
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRN-ASLTDVSL 339
G TD L L L L++LNL +++ L L++ L HLSL A+LTD L
Sbjct: 703 GNLTD--AGLAHLTPLVALQQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGL 760
Query: 340 HQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
L++L LT L++ D T +GL KP +L+ L L G LT DA L + K
Sbjct: 761 AHLTTLVALTYLNLSDCNNFTGAGLTHLKPLVALQYLSLSGCKKLT-DAGLAYLK 814
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 192/429 (44%), Gaps = 75/429 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLG 59
+ L+ LDLS C K+TD G+ HL + L++L L + + LT G+A L+ L L LDLG
Sbjct: 491 LVALQNLDLSFCYKLTDDGLAHLKPLVALKQLNLWACSNLTGAGLAHLTPLIALKHLDLG 550
Query: 60 -GLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GV 111
+TD L L+ L L+YL L G ++++ G A L L LN++ G+
Sbjct: 551 FCYGLTDDGLAHLKPLVALQYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGL 610
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L + +L+ LNLS+C L + LA T + + + LS
Sbjct: 611 AHLKPLIALQQLNLSSC------------KKLTGVGLAHLTSL--------VNLTHLSLS 650
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSS-------------SMIGDDSVEMVACVG------ 212
+ N + + L + AL+ LDL+ +++ + + AC
Sbjct: 651 ECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLITLVALQQLYLSACGNLTDAGL 710
Query: 213 ------ANLRNLNLSNTRFSSAGVGILAGHLPNLEIL---SLSG-TQIDDYAISYMSMMP 262
L+ LNLS + GVG+ HL +L L SLS + D +++++ +
Sbjct: 711 AHLTPLVALQQLNLSGCK-KLTGVGL--AHLTSLATLTHLSLSACANLTDDGLAHLTTLV 767
Query: 263 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTF 321
+L ++++S D F GA LT L+ L L+ L+L + ++DA L L
Sbjct: 768 ALTYLNLS--DCNNF---TGA------GLTHLKPLVALQYLSLSGCKKLTDAGLAYLKPL 816
Query: 322 KELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHG 379
L L+LR +TD L L SL L LS+ LT+ GL KP +L L L
Sbjct: 817 VALQQLNLRGCKKITDAGLTHLMSLVALQCLSLSGCKKLTDDGLAHLKPLVALTHLSLGE 876
Query: 380 GWLLTEDAI 388
LT+D +
Sbjct: 877 CVKLTDDGL 885
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 182/400 (45%), Gaps = 64/400 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+ L+ L LS C K+TDAG+ HL S+ TL++L +S LT DG+A L L L L+L
Sbjct: 566 LVALQYLSLSGCKKLTDAGLAHLTSLITLQQLNISSCANLTDDGLAHLKPLIALQQLNLS 625
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---------NLAWT 109
+T + L L L L +L L S+ N A L L L NL
Sbjct: 626 SCKKLTGVGLAHLTSLVNLTHLSL--SECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDA 683
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G+ L + +L+ L LS C GN A LA + T L++
Sbjct: 684 GLAHLITLVALQQLYLSAC-------GNLTDAGLAHL------------------TPLVA 718
Query: 170 FLDVSNSSLSR-----FCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSN- 222
++ S + LT + L HL LS+ + DD + + + A L LNLS+
Sbjct: 719 LQQLNLSGCKKLTGVGLAHLTSLATLTHLSLSACANLTDDGLAHLTTLVA-LTYLNLSDC 777
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
F+ AG+ L L L+ LSLSG ++ D ++Y+ + +L+ + +++G +
Sbjct: 778 NNFTGAGLTHLKP-LVALQYLSLSGCKKLTDAGLAYLKPLVALQQL-----NLRGCKKIT 831
Query: 282 GAETDLVLSLTALQ--NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVS 338
A ++SL ALQ +L+ ++L +D L L L HLSL LTD
Sbjct: 832 DAGLTHLMSLVALQCLSLSGCKKL-------TDDGLAHLKPLVALTHLSLGECVKLTDDG 884
Query: 339 LHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 377
L L+ L LT+L++ D LT +GL P +L +DL
Sbjct: 885 LAHLTPLLALTHLNLSDCNNLTVAGLAHLTPLENLTYVDL 924
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 191/401 (47%), Gaps = 32/401 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLGGLP 62
LK L L C +TD G+ +L + TL+ L L S T G+A L SL +L+ L L
Sbjct: 343 LKVLYLQECNNLTDVGLAYLRPLITLQGLNLNSCKKFTDAGLAHLDSLIDLTQLGLAKCH 402
Query: 63 -VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L+ L L+ L+L G ++++ G LK L++LNL+ G+ L
Sbjct: 403 NITDNGLAYLRPLIALQGLNLNGCKKLTDAGLVHLKSLVTLTYLNLSQCDDLTDAGLAHL 462
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI----NEREAFLYIETSL--L 168
+ +L+ L+LS C + G + PL + +F ++ A L +L L
Sbjct: 463 TPLVALQHLDLSFCCYNITDAGLAHLTPLVALQNLDLSFCYKLTDDGLAHLKPLVALKQL 522
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT-RFS 226
+ SN + + LT + AL+HLDL + DD + + + A L+ L+LS + +
Sbjct: 523 NLWACSNLTGAGLAHLTPLIALKHLDLGFCYGLTDDGLAHLKPLVA-LQYLSLSGCKKLT 581
Query: 227 SAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
AG+ L L L+ L++S + D ++++ + +L+ +++S+ + VG
Sbjct: 582 DAGLAHLTS-LITLQQLNISSCANLTDDGLAHLKPLIALQQLNLSSCKK---LTGVG--- 634
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSS 344
+ LT+L NL HL E ++DA L L+ L L L +LTD L L +
Sbjct: 635 --LAHLTSLVNLTHLSL--SECGNLTDAGLAHLAPLVALQQLDLNFCYNLTDAGLAHLIT 690
Query: 345 LSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLT 384
L L L + LT++GL P +L+ L+L G LT
Sbjct: 691 LVALQQLYLSACGNLTDAGLAHLTPLVALQQLNLSGCKKLT 731
>gi|149174696|ref|ZP_01853321.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
gi|148846390|gb|EDL60728.1| hypothetical protein PM8797T_26210 [Planctomyces maris DSM 8797]
Length = 460
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 26/370 (7%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LDL + DA +KHL + +LE+L L T + L L L + D
Sbjct: 98 LDL-KGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGKKNKLWFLSLESTAIGDE 156
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSL 120
+++L L L+ L L + ++N V+ FP L L+L + G+ + + +L
Sbjct: 157 GVKNLSDLQGLQVLSLRATNITNDALKVVAAFPELKDLDLRFNKEINDEGMPHIKGMKNL 216
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGT--TFINEREAFLYIETSLLSF-LDVSNSS 177
+ L + + EG ++ A L + T I++ L + +L+S LD + S
Sbjct: 217 KVLKVQATQVTD--EGMKDIAALPNLQRLNTWGRNISDETLELLKDKNLVSLELDDTEIS 274
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
+L M +E L L +G+ +E + + L+ L+L +T + G+ L+G L
Sbjct: 275 DEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNM-KKLQTLHLRDTVVTDEGMKYLSG-L 332
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
+L L L + I D + + + L + + T+ TD L +
Sbjct: 333 TDLTYLDLDESMIGDQGLEQIKDLKKLTRLGLWGTET----------TDQ--GLKVISGF 380
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L RLNLE T ++DA L L K+L +L+L ++D L L++L L L +
Sbjct: 381 TELNRLNLEGTPITDAGLKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQ 440
Query: 358 LTNSGLGSFK 367
+T+ G+ F+
Sbjct: 441 VTDDGVKQFE 450
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 38 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
G++ DG L +LDL G D L+ L L LE L LWG ++ +
Sbjct: 88 GMSDDGRVL--------ILDLKGTNAQDADLKHLAGLPSLERLILWGPNFTDVSTEEIGK 139
Query: 98 FPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN 155
+L FL+L T G + N+S L+ L + +SL T N
Sbjct: 140 KNKLWFLSLESTAIGDEGVKNLSDLQGLQV--------------------LSLRATNITN 179
Query: 156 ER----EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
+ AF ++ L F N + MK L+ L + ++ + D+ ++ +A +
Sbjct: 180 DALKVVAAFPELKDLDLRFNKEINDE--GMPHIKGMKNLKVLKVQATQVTDEGMKDIAAL 237
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL+ LN S + +L NL L L T+I D + Y+ M +++ + +
Sbjct: 238 -PNLQRLNTWGRNISDETLELLKDK--NLVSLELDDTEISDEGMKYLKDMTNMESLHLR- 293
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
+ F+ G E +QN+ L+ L+L T V+D + LS +L +L L
Sbjct: 294 ---RDFVGNPGIEN--------IQNMKKLQTLHLRDTVVTDEGMKYLSGLTDLTYLDLDE 342
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+ + D L Q+ L KLT L + T+ GL L L+L G
Sbjct: 343 SMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEG 390
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 136/314 (43%), Gaps = 66/314 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK+LDL ++ D GM H+ + L+ L + T +T +G+ +++L NL L+ G +
Sbjct: 191 LKDLDLRFNKEINDEGMPHIKGMKNLKVLKVQATQVTDEGMKDIAALPNLQRLNTWGRNI 250
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNIS 118
+D L L+ L L+L +++S+ G LK + L+L G+ + N+
Sbjct: 251 SDETLELLKD-KNLVSLELDDTEISDEGMKYLKDMTNMESLHLRRDFVGNPGIENIQNMK 309
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L+ L+L + + EG
Sbjct: 310 KLQTLHLRDTVVTD--EG------------------------------------------ 325
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+L+ + L +LDL SMIGD +E + + L L L T + G+ +++G
Sbjct: 326 --MKYLSGLTDLTYLDLDESMIGDQGLEQIKDL-KKLTRLGLWGTETTDQGLKVISG-FT 381
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L+L GT I D + + + L+++++S T+ I G +T L AL+NL
Sbjct: 382 ELNRLNLEGTPITDAGLKQLLPLKKLEYLNLSKTE----ISDEGLKT-----LAALKNLK 432
Query: 299 HLERLNLEQTQVSD 312
L+ L TQV+D
Sbjct: 433 ELQ---LSFTQVTD 443
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT ++ L L R V + G++++ ++ L+ L L +T +T +G+ LS L +L+ LDL
Sbjct: 284 MTNMESLHLRRDF-VGNPGIENIQNMKKLQTLHLRDTVVTDEGMKYLSGLTDLTYLDLDE 342
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
+ D L ++ L KL L LWG++ +++G V+ F L+ LNL T +T L
Sbjct: 343 SMIGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEGTPITDAGLKQLL 402
Query: 116 NISSLECLNLSNCTI 130
+ LE LNLS I
Sbjct: 403 PLKKLEYLNLSKTEI 417
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L LDL + + D G++ + + L +L L T T G+ ++S L+ L+L G
Sbjct: 332 LTDLTYLDLDESM-IGDQGLEQIKDLKKLTRLGLWGTETTDQGLKVISGFTELNRLNLEG 390
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
P+TD L+ L L KLEYL+L +++S+ G L L L L++T VT
Sbjct: 391 TPITDAGLKQLLPLKKLEYLNLSKTEISDEGLKTLAALKNLKELQLSFTQVT 442
>gi|290997674|ref|XP_002681406.1| predicted protein [Naegleria gruberi]
gi|284095030|gb|EFC48662.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 173/402 (43%), Gaps = 32/402 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK LD+ ++ G K + + L L + + A G L+S ++ L+ LD+GG
Sbjct: 1 MKQLKSLDIGEN-QIGAVGAKFISEMKQLTSLDIIYNRIGAVGAKLISKMKQLTSLDIGG 59
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+ D + + + +L L ++ + + G + +L+ L++ + GV +
Sbjct: 60 NQIGDEGAKFISEMKQLTSLSIYNNLIGAVGFEFISEMKQLTSLDICYNEIGDEGVKSIC 119
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-----REAFLYIETSLLSF 170
+ L L++ N I G+E ++++ + IN + A E L+
Sbjct: 120 EMKQLTSLSIYNNRI-----GDEGVKFISEMKQLTSLDINNNRIGVQGAKSICEMKQLTS 174
Query: 171 LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
L + N+ F+++MK L LD+S + IG + + ++ + L +LN+ R +
Sbjct: 175 LSIYNNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFISEM-KQLTSLNICYNRIGAE 233
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
GV +++ + L L + G +I D ++S M L ++I I + +E +
Sbjct: 234 GVKLIS-EMKQLTSLDIGGNEIGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEMKQL 292
Query: 289 LSLTALQN------------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
SL A N + L LN+ + Q+ D +S K+L L + + D
Sbjct: 293 TSLGAYNNEIGVEGTKLISEMKQLTSLNISKNQIGDEGAKLISEMKQLASLDIYYNEIGD 352
Query: 337 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+ +S + +L +L+I + + G + L LD+H
Sbjct: 353 EGVKLISEMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIH 394
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 156/360 (43%), Gaps = 42/360 (11%)
Query: 1 MTCLKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
M L LD+ C ++ D G+K + + L L + + +G+ +S ++ L+ LD+
Sbjct: 97 MKQLTSLDI--CYNEIGDEGVKSICEMKQLTSLSIYNNRIGDEGVKFISEMKQLTSLDIN 154
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNI 117
+ +S+ + +L L ++ +Q GA + +L+ L+++ GV I
Sbjct: 155 NNRIGVQGAKSICEMKQLTSLSIYNNQTGAVGAKFISEMKQLTSLDISVNEIGVEGAKFI 214
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
S ++ L N + +I G I+E + L+ LD+ +
Sbjct: 215 SEMKQLTSLNICYN-------------RIGAEGVKLISEMKQ--------LTSLDIGGNE 253
Query: 178 LSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ F+++MK L L++ + IGD+ + ++ + L +L N G +++
Sbjct: 254 IGDEGAKFISEMKQLTSLNICENQIGDEGAKSISEM-KQLTSLGAYNNEIGVEGTKLIS- 311
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
+ L L++S QI D +S M L +DI + ++G E + +
Sbjct: 312 EMKQLTSLNISKNQIGDEGAKLISEMKQLASLDI-------YYNEIGDE-----GVKLIS 359
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+ L+ LN+ + Q+ D +S K+L L + + D + +S + +LT+LSI +
Sbjct: 360 EMKQLKSLNISKNQIGDEGAKLISEMKQLTSLDIHFNEIGDEGVKLISEMKQLTSLSIYN 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 48/277 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S ++ G K + + L L + + A+G+ L+S ++ L+ LD+GG
Sbjct: 193 MKQLTSLDIS-VNEIGVEGAKFISEMKQLTSLNICYNRIGAEGVKLISEMKQLTSLDIGG 251
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ D + + + +L L++ +Q+ + GA ++++ ++SL
Sbjct: 252 NEIGDEGAKFISEMKQLTSLNICENQIGDEGAK----------------SISEMKQLTSL 295
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
N NE I + GT I+E + L+ L++S + +
Sbjct: 296 GAYN------------NE-------IGVEGTKLISEMKQ--------LTSLNISKNQIGD 328
Query: 181 FC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+++MK L LD+ + IGD+ V++++ + L++LN+S + G +++ +
Sbjct: 329 EGAKLISEMKQLASLDIYYNEIGDEGVKLISEM-KQLKSLNISKNQIGDEGAKLIS-EMK 386
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
L L + +I D + +S M L + I N +K
Sbjct: 387 QLTSLDIHFNEIGDEGVKLISEMKQLTSLSIYNQKMK 423
>gi|300704275|ref|YP_003745878.1| leucine-rich-repeat type III effector protein (gala6) [Ralstonia
solanacearum CFBP2957]
gi|299071939|emb|CBJ43268.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CFBP2957]
Length = 519
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 171/394 (43%), Gaps = 27/394 (6%)
Query: 4 LKELDLSRCVK--VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LD+SRC V++AG+ HL + L+ L L+ + A+G LL++ +L+ L L G
Sbjct: 57 VEHLDISRCTGRGVSNAGLAHL-ATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGC 115
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPN 116
+ D +L + LDL + + GA L P +S LNL G+ L
Sbjct: 116 SIGDRAATALAQSRSIASLDLSVNMIGPDGARALASAPLVS-LNLHNNGIGDEGALALAT 174
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+L+ LN SN I D+ + G + L +++LAG I A + L+ LD+S
Sbjct: 175 SGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLST 233
Query: 176 SSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ L L ++L L++ S+ IGDD E +A L++LNLS G G L
Sbjct: 234 NRLGDAGAQALAGSRSLTSLNVRSNEIGDDGTEALA-RNTTLKSLNLSYNPIGFWGAGAL 292
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
G L L L ID Y S ++ SL + + + I GA A
Sbjct: 293 GGS-TTLRELDLRCCAIDPYGASALARNTSLASLHLGSN----RIGDDGAR--------A 339
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L L+L + + DA L+ L L+L + D L+ +LT+L++
Sbjct: 340 LATSRTLTLLDLSRNNIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNL 399
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ +G +L LDL L E A
Sbjct: 400 GRNRIGPNGAQHLAKSATLTELDLSENRLGPEGA 433
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ELDL RC + G L ++L L L + DG L++ + L++LDL
Sbjct: 296 TTLRELDL-RCCAIDPYGASALARNTSLASLHLGSNRIGDDGARALATSRTLTLLDLSRN 354
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ D ++L L L+L+G++V + GAA L PRL+ LNL G L
Sbjct: 355 NIHDAGAQALAGNGSLTSLNLYGNEVDDDGAAALAQHPRLTSLNLGRNRIGPNGAQHLAK 414
Query: 117 ISSLECLNLS 126
++L L+LS
Sbjct: 415 SATLTELDLS 424
>gi|217074604|gb|ACJ85662.1| unknown [Medicago truncatula]
Length = 331
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 64/364 (17%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
MK + L++L +S + +T GI+ L LQ LS L++ G +T + L L
Sbjct: 1 MKAISGFINLKELQISNSSITDLGISYLRGLQKLSTLNVEGCSITAACFEYISALAALAC 60
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSIL 134
L+L +S+ G L L+LA+ +T L ++ LE LNL +C I
Sbjct: 61 LNLNRCGLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQI---- 116
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
G+E L ++L +++ +LS +V NS + +++ + LE L+
Sbjct: 117 -GDEGLVNLTGLTL--------------LKSLVLSDTEVGNSGIR---YISGLNKLEDLN 158
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
LS + + D+ ++ + + NL++LNL + + AG+ L L L L L G +I D
Sbjct: 159 LSFTSVTDNGLKRLLGL-TNLKSLNLDARQITDAGLANLT-SLSGLITLDLFGARITDSG 216
Query: 255 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 314
+Y+ +L+ ++I G + G + ++ + L +LNL Q
Sbjct: 217 TTYLRSFKNLQSLEICG----GLLTDAGVKN--------IREIVSLTQLNLSQ------- 257
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
N LTD +L +S ++ L +L++ ++ +TN GL KP ++L+
Sbjct: 258 ----------------NCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYLKPLKNLRT 301
Query: 375 LDLH 378
L L
Sbjct: 302 LSLE 305
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK L LS +V ++G++++ ++ LE L LS T +T +G+ L L NL L+L
Sbjct: 127 LTLLKSLVLSD-TEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDA 185
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLP 115
+TD L +L L+ L LDL+G+++++ G L+ F L L + GV +
Sbjct: 186 RQITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIR 245
Query: 116 NISSLECLNLS-NCTI-DSILEGNENKAPLAKISLAGTTFINEREAFL 161
I SL LNLS NC + D LE L ++++ + NE +L
Sbjct: 246 EIVSLTQLNLSQNCKLTDKTLELISGMTALRSLNVSNSRVTNEGLRYL 293
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 16/235 (6%)
Query: 168 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LS L+V S++ CF ++ + AL L+L+ + DD E + + L+ L+L+ +
Sbjct: 34 LSTLNVEGCSITAACFEYISALAALACLNLNRCGLSDDGFEKFSGL-TGLKRLSLAFNKI 92
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV 281
+ A + L G L LE L+L QI D + ++ + LK + +S+T++ +I +
Sbjct: 93 TDACLVHLKG-LTKLEYLNLDSCQIGDEGLVNLTGLTLLKSLVLSDTEVGNSGIRYISGL 151
Query: 282 GAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
DL LS T++ + L +L+ LNL+ Q++DA L L++ LI L L A
Sbjct: 152 NKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDARQITDAGLANLTSLSGLITLDLFGAR 211
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+TD L S L +L I +LT++G+ + + SL L+L LT+ +
Sbjct: 212 ITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIREIVSLTQLNLSQNCKLTDKTL 266
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 44/251 (17%)
Query: 38 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ----------- 86
GL+ DG S L L L L +TD L L+ LTKLEYL+L Q
Sbjct: 67 GLSDDGFEKFSGLTGLKRLSLAFNKITDACLVHLKGLTKLEYLNLDSCQIGDEGLVNLTG 126
Query: 87 -------------VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
V N G + +L LNL++T VT +L +++L+ LNL
Sbjct: 127 LTLLKSLVLSDTEVGNSGIRYISGLNKLEDLNLSFTSVTDNGLKRLLGLTNLKSLNLDAR 186
Query: 129 TI-DSILEGNENKAPL-------AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
I D+ L + + L A+I+ +GTT++ + +E D ++
Sbjct: 187 QITDAGLANLTSLSGLITLDLFGARITDSGTTYLRSFKNLQSLEICGGLLTDAGVKNIRE 246
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
LTQ+ ++ L+ D ++E+++ + A LR+LN+SN+R ++ G+ L L NL
Sbjct: 247 IVSLTQLNLSQNCKLT-----DKTLELISGMTA-LRSLNVSNSRVTNEGLRYLK-PLKNL 299
Query: 241 EILSLSGTQID 251
LSL +++
Sbjct: 300 RTLSLESCKVN 310
>gi|290970865|ref|XP_002668286.1| predicted protein [Naegleria gruberi]
gi|284081599|gb|EFC35542.1| predicted protein [Naegleria gruberi]
Length = 368
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 167/369 (45%), Gaps = 44/369 (11%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D K + + L L + + +G+ +S ++ L L++ + D ++S+
Sbjct: 13 QIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNNRIGDEGVKSIIE 72
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA--------WTGVTKLPNISSLECLN- 124
+ +L LD+ G+++ + G + +L+ LN++ T ++++ ++SL N
Sbjct: 73 MKQLTSLDIGGNRIGDEGVKFISEMKQLTSLNISENQIGDKEATFISEMKQLTSLNIYNN 132
Query: 125 -LSNCTIDSILEGNENKA---PLAKISLAGTTFINEREAFLYI---------------ET 165
+ + + SI+E + K+ +IS+ G FI+E + + + E
Sbjct: 133 RIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEMKQLVSLNIYNNRIDEGVKSISEM 192
Query: 166 SLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L+ L+++ + + F+++MK L LD+ ++ IGD+ ++ + L +LN+ N
Sbjct: 193 KQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDEGAIFISKM-KQLTSLNIYNN 251
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
R GV + + L L + +I D + ++S M L +DIS ++G
Sbjct: 252 RIGDEGVKSII-EMKRLTSLDIGRNRIGDEGVKFISEMKQLASLDISEN-------RIGD 303
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
E + ++ + L LN+ + ++ D +S K L L + + D + +S
Sbjct: 304 E-----GVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFIS 358
Query: 344 SLSKLTNLS 352
+ +L +L+
Sbjct: 359 EMKQLASLN 367
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 163/360 (45%), Gaps = 32/360 (8%)
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 105
++ L+ L + G + D + + + +L LD++ +++ + G + +L LN
Sbjct: 1 MKQLTSLIISGNQIGDKEAKFISEMKQLTSLDIYNNRIGDEGVKSISEMKQLVSLNIYNN 60
Query: 106 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-----REA 159
+ GV + + L L++ I G+E ++++ + I+E +EA
Sbjct: 61 RIGDEGVKSIIEMKQLTSLDIGGNRI-----GDEGVKFISEMKQLTSLNISENQIGDKEA 115
Query: 160 FLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
E L+ L++ N+ + + +MK L+ LD+ + I + + ++ + L +
Sbjct: 116 TFISEMKQLTSLNIYNNRIGDEGVKSIIEMKQLKSLDIGRNQISVEGAKFISEM-KQLVS 174
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--K 275
LN+ N R GV ++ + L L+++ +I D ++S M L +DI N I +
Sbjct: 175 LNIYNNRIDE-GVKSIS-EMKQLTSLNIAENRIGDKEAKFISEMKQLTSLDIYNNRIGDE 232
Query: 276 G--FIQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
G FI ++ T L + + ++ + L L++ + ++ D + +S K+L
Sbjct: 233 GAIFISKMKQLTSLNIYNNRIGDEGVKSIIEMKRLTSLDIGRNRIGDEGVKFISEMKQLA 292
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
L + + D + +S + +LT+L+I + + + G S + LK LD+ G + E
Sbjct: 293 SLDISENRIGDEGVKSISEMKQLTSLNISENRIGDEGAKSISEMKRLKSLDIGGNQIGDE 352
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+ R ++ D G+K + + L L +SE + +G+ +S ++ L+ L++
Sbjct: 264 MKRLTSLDIGRN-RIGDEGVKFISEMKQLASLDISENRIGDEGVKSISEMKQLTSLNISE 322
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
+ D +S+ + +L+ LD+ G+Q+ + G + +L+ LN
Sbjct: 323 NRIGDEGAKSISEMKRLKSLDIGGNQIGDEGVKFISEMKQLASLN 367
>gi|290993192|ref|XP_002679217.1| predicted protein [Naegleria gruberi]
gi|284092833|gb|EFC46473.1| predicted protein [Naegleria gruberi]
Length = 310
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 130/260 (50%), Gaps = 31/260 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLT---ADGIALLSSLQNLSVLDLGG 60
L+EL++ C D G++ + ++ L+KL + G+ ADG LLS++++L+ LD+
Sbjct: 63 LRELNIRYC----DIGVEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKSLTKLDVAE 118
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+ D +S+ L +L L++ G + GA + L L+++ G +
Sbjct: 119 CEIGDEGCQSITELYQLTDLNINGDGIGVGGANCIGQMRNLKSLDISNNFFGNYGAKSIS 178
Query: 116 NISSLECLNLSNCTIDSI----LEGNENKAPLA----KISLAGTTFINEREAFLYIETSL 167
+S LE LN+S ID + L +N L+ +I+ GT +I +E
Sbjct: 179 ELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYI--------VELDQ 230
Query: 168 LSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
L+ LD+SN+ + +++M L L++SS++IGD+ + ++ + L +LN+S R
Sbjct: 231 LTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGAQYISHL-KKLTSLNVSKCRV 289
Query: 226 SSAGVGILAGHLPNLEILSL 245
S GV + L +L+ L +
Sbjct: 290 SEEGVESIRKQLKHLKTLEV 309
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 180 RFC--------FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
R+C +LT++ L LD+ + I D ++++ + + L L+++ G
Sbjct: 69 RYCDIGVEEVKYLTKLDKLHSLDIGINQIYADGAKLLSTMKS-LTKLDVAECEIGDEGCQ 127
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
+ L L L+++G I + + M +LK +DISN F GA+
Sbjct: 128 SIT-ELYQLTDLNINGDGIGVGGANCIGQMRNLKSLDISNN----FFGNYGAK------- 175
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
++ L+ LE LN+ + + + ++ L K L LS+ + +TD + L +LT+L
Sbjct: 176 -SISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHHNEITDEGTKYIVELDQLTHL 234
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
I + + G S L L++ + E A
Sbjct: 235 DISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGA 270
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK LD+S + G K + +S LE L +S + + G+ L L+NL+ L +
Sbjct: 156 MRNLKSLDISNNF-FGNYGAKSISELSQLEILNVSYSDIDEVGVYQLRKLKNLTSLSIHH 214
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+TD + + L +L +LD+ +Q+ GA + +L+ LN++ G +
Sbjct: 215 NEITDEGTKYIVELDQLTHLDISNNQIETEGAKSISEMSQLTSLNISSNIIGDEGAQYIS 274
Query: 116 NISSLECLNLSNCTI 130
++ L LN+S C +
Sbjct: 275 HLKKLTSLNVSKCRV 289
>gi|149174540|ref|ZP_01853166.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148846650|gb|EDL60987.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 309
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 15/255 (5%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ DAG+ +L +S L KL LS + +T DG+ L SL++L + L G+PV+D L +
Sbjct: 49 KLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKK 108
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPR-----LSFLNLAWTGVTKLPNISSLECLNLSNC 128
L+ LE L+L ++V++ G LK L+ L + G+ L + SLE L LS
Sbjct: 109 LSNLEILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSET 168
Query: 129 TI-DSILEGNENKAPLAKISLAGTTFINER----EAFLYIETSLLSFLDVSNSSLSRFCF 183
I D L + L + L T +E + ++ L +++ L +
Sbjct: 169 QITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLK---Y 225
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L +MK +E L+L+ + I + + + + N+ ++NL NT S + L + NL L
Sbjct: 226 LIKMKDMEWLELNDTQITNAGISEIKVL-ENIVDMNLRNTDVSDKCITSLK-KMKNLGTL 283
Query: 244 SLSGTQIDDYAISYM 258
+ GT+I + I+ +
Sbjct: 284 YIDGTEITEEGIAKL 298
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
+L ++ L LDLS S + DD + + + +LR + L S +G+ L NL
Sbjct: 55 LVYLGRLSKLRKLDLSGSKVTDDGMVHLKSL-KSLREITLHGIPVSDSGLAEFK-KLSNL 112
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
EIL+LS T++ D + ++ + SLK + ++ +I L L L L
Sbjct: 113 EILNLSRTKVTDAGLKHLKSLDSLKELFLTGLEITAD------------GLAHLSGLKSL 160
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
E L L +TQ++D L L T K+L L LR+ +TD L Q+ L++L L +R+ +T+
Sbjct: 161 ETLGLSETQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITD 220
Query: 361 SGLGSFKPPRSLKLLDLH 378
GL + ++ L+L+
Sbjct: 221 DGLKYLIKMKDMEWLELN 238
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 41/296 (13%)
Query: 52 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----- 106
N+S + G + D L L L+KL LDL GS+V++ G LK L + L
Sbjct: 39 NISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPV 98
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
+ +G+ + +S+LE LNLS K++ AG + ++ +
Sbjct: 99 SDSGLAEFKKLSNLEILNLSRT----------------KVTDAGLKHLKSLDSLKEL--- 139
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L+ L+++ L+ L+ +K+LE L LS + I DD++ + + LR L L +T+ +
Sbjct: 140 FLTGLEITADGLA---HLSGLKSLETLGLSETQITDDALAHLKTL-KKLRVLLLRDTQIT 195
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
G+ + G L L+ L L TQI D + Y+ M ++++++++T I
Sbjct: 196 DEGLKQIKG-LTRLQRLWLRNTQITDDGLKYLIKMKDMEWLELNDTQITNA--------- 245
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
++ ++ L ++ +NL T VSD + L K L L + +T+ + +L
Sbjct: 246 ---GISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLYIDGTEITEEGIAKL 298
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 141 APLAKISLAGTTFINEREAFLYIETSL----LSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
+ L K+ L+G+ ++ L SL L + VS+S L+ F L+ LE L+LS
Sbjct: 62 SKLRKLDLSGSKVTDDGMVHLKSLKSLREITLHGIPVSDSGLAEFKKLSN---LEILNLS 118
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
+ + D ++ + + + L+ L L+ ++ G+ L+G L +LE L LS TQI D A++
Sbjct: 119 RTKVTDAGLKHLKSLDS-LKELFLTGLEITADGLAHLSG-LKSLETLGLSETQITDDALA 176
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 316
++ + L+ + + +T I TD L ++ L L+RL L TQ++D L
Sbjct: 177 HLKTLKKLRVLLLRDTQI----------TDE--GLKQIKGLTRLQRLWLRNTQITDDGLK 224
Query: 317 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L K++ L L + +T+ + ++ L + ++++R+ +++ + S K ++L L
Sbjct: 225 YLIKMKDMEWLELNDTQITNAGISEIKVLENIVDMNLRNTDVSDKCITSLKKMKNLGTLY 284
Query: 377 LHGGWLLTEDAILQFCKMHP--RIE 399
+ G +TE+ I + K P R+E
Sbjct: 285 IDGTE-ITEEGIAKLEKSLPYCRVE 308
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L+ L+LSR KVTDAG+KHL S+ +L++L+L+ +TADG+A LS L++L L L
Sbjct: 109 LSNLEILNLSRT-KVTDAGLKHLKSLDSLKELFLTGLEITADGLAHLSGLKSLETLGLSE 167
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
+TD L L+ L KL L L +Q+++ G +K RL L L T +T L
Sbjct: 168 TQITDDALAHLKTLKKLRVLLLRDTQITDEGLKQIKGLTRLQRLWLRNTQITDDGLKYLI 227
Query: 116 NISSLECLNLSNCTI 130
+ +E L L++ I
Sbjct: 228 KMKDMEWLELNDTQI 242
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ LKEL L+ +++T G+ HL + +LE L LSET +T D +A L +L+ L VL L
Sbjct: 133 LDSLKELFLT-GLEITADGLAHLSGLKSLETLGLSETQITDDALAHLKTLKKLRVLLLRD 191
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+TD L+ ++ LT+L+ L L +Q+++ G L + +L L T G++++
Sbjct: 192 TQITDEGLKQIKGLTRLQRLWLRNTQITDDGLKYLIKMKDMEWLELNDTQITNAGISEIK 251
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
+ ++ +NL N + ++ L K+ GT +I+ E
Sbjct: 252 VLENIVDMNLRNTDV-----SDKCITSLKKMKNLGTLYIDGTE 289
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 261 MPSLKFIDIS-NTDIKGFIQQVG-AETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFP 317
+ SLK I + D G I QV + + LV L L L+ L +L+L ++V+D +
Sbjct: 22 IKSLKEISANLKMDYNGNISQVSFSGSKLVDAGLVYLGRLSKLRKLDLSGSKVTDDGMVH 81
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L + K L ++L ++D L + LS L L++ +T++GL K SLK L L
Sbjct: 82 LKSLKSLREITLHGIPVSDSGLAEFKKLSNLEILNLSRTKVTDAGLKHLKSLDSLKELFL 141
Query: 378 HG 379
G
Sbjct: 142 TG 143
>gi|300691655|ref|YP_003752650.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078715|emb|CBJ51374.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum PSI07]
Length = 608
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 142/341 (41%), Gaps = 43/341 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAG L + L +L L + G L++ +L+ LDLG + D R+L
Sbjct: 294 IDDAGAGALADNTLLTQLNLQGNRIGRGGAQALANSTSLTDLDLGNNRLGDRGARALAGS 353
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
L L + G+++ ++GA L L LNL++ GV L ++L L+L C
Sbjct: 354 KSLTSLSVRGNEIGDKGAKALARNATLKSLNLSYNLISLRGVRALGGSATLSVLDLCACD 413
Query: 130 IDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
IDS A LA + L G+ I +R A + S L+ L +S + +
Sbjct: 414 IDSSGASALARNASLASLYL-GSNRIGDRGARALAKNSTLTRLALSGNGI---------- 462
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
H + ++ G+DS L +L+L G LA H P L L L G
Sbjct: 463 ---HTTGAQALAGNDS----------LISLDLGGNEIDDDGAAALARH-PRLISLDLRGN 508
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+I ++ +L +D+S ++GAE LS + + L LN+
Sbjct: 509 RIRSAGAQQLAKSATLAELDLS-------ANRIGAEGAEALSRSTV-----LTTLNVSDN 556
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+ DA L+ LI L R + + +V L + ++LT
Sbjct: 557 AIGDAGALALAKSTSLISLDARRSGIGEVGARALEANTRLT 597
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G + L STL +L LS G+ G L+ +L LDLGG + D +L
Sbjct: 437 RIGDRGARALAKNSTLTRLALSGNGIHTTGAQALAGNDSLISLDLGGNEIDDDGAAALAR 496
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
+L LDL G+++ + GA L L+ L+L+ G L + L LN+S+
Sbjct: 497 HPRLISLDLRGNRIRSAGAQQLAKSATLAELDLSANRIGAEGAEALSRSTVLTTLNVSDN 556
Query: 129 TI 130
I
Sbjct: 557 AI 558
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 22/226 (9%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R ++ D G K L +TL+ L LS ++ G+ L LSVLDL + +
Sbjct: 362 RGNEIGDKGAKALARNATLKSLNLSYNLISLRGVRALGGSATLSVLDLCACDIDSSGASA 421
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
L L L L +++ +RGA L L+ L L+ G+ + T
Sbjct: 422 LARNASLASLYLGSNRIGDRGARALAKNSTLTRLALSGNGI---------------HTTG 466
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMK 188
L GN++ L + L G ++ A L L+S LD+ + + L +
Sbjct: 467 AQALAGNDS---LISLDLGGNEIDDDGAAALARHPRLIS-LDLRGNRIRSAGAQQLAKSA 522
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L LDLS++ IG + E ++ L LN+S+ AG LA
Sbjct: 523 TLAELDLSANRIGAEGAEALSRSTV-LTTLNVSDNAIGDAGALALA 567
>gi|149177419|ref|ZP_01856023.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148843752|gb|EDL58111.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 375
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 155/395 (39%), Gaps = 103/395 (26%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
E+D R K+ DA +K + +S L L L+ET P+TD
Sbjct: 76 EVDF-RGTKIDDAALKEIAGLSHLRSLLLNET------------------------PITD 110
Query: 66 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 125
L S+ +T LE LDL ++N+ ++ L +S L+ L L
Sbjct: 111 AALESVGKVTTLENLDLRNCSLNNKA-------------------ISYLTGLSKLKALRL 151
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 185
S GN S + + ++ +L FL VS LS+ L
Sbjct: 152 S---------GN---------SDIDDDAMADINQLTNLKALMLDFLWVSGDGLSQ---LK 190
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+ LE L L+ +++ DD + + T+F P L+ L
Sbjct: 191 DLNKLEELYLAKTLVDDDGLATL--------------TQF------------PKLKKTRL 224
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
S QI D ++ + +P L+ ID+S + + G + L L L++LNL
Sbjct: 225 SQNQISDEGLAVFAKIPQLEEIDLSENSL---LSDAG--------MKHLSGLGKLKKLNL 273
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 365
+ ++DA + PL L L+L N LT+ L L + KL L + +++ GL
Sbjct: 274 WRVGLTDAGVEPLQGLTSLEWLNLDNTRLTNAGLKYLKDMQKLEFLHLGSTAVSDEGLKH 333
Query: 366 FKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
+P SLK L L +TE + + K P E+
Sbjct: 334 LEPLTSLKELKLTRT-AVTEKGVAELKKKLPNTEI 367
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+E+DLS ++DAGMKHL + L+KL L GLT G+ L L +L L+L +
Sbjct: 243 LEEIDLSENSLLSDAGMKHLSGLGKLKKLNLWRVGLTDAGVEPLQGLTSLEWLNLDNTRL 302
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---------KL 114
T+ L+ L+ + KLE+L L + VS+ G L+ L L L T VT KL
Sbjct: 303 TNAGLKYLKDMQKLEFLHLGSTAVSDEGLKHLEPLTSLKELKLTRTAVTEKGVAELKKKL 362
Query: 115 PN 116
PN
Sbjct: 363 PN 364
>gi|87311782|ref|ZP_01093896.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
gi|87285456|gb|EAQ77376.1| hypothetical protein DSM3645_04405 [Blastopirellula marina DSM
3645]
Length = 427
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 52/364 (14%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTD + +LL + L + T ++ GI LS+L++LSVL L +++ L S+ L
Sbjct: 95 VTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQLRRTNISNKSLESMLQL 154
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
KL YLDL +++ G ++ P + L L G+ L +S L+ LN+
Sbjct: 155 PKLRYLDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTN 214
Query: 130 I-DSILEGNENKAPLAKISLAGTTFINEREAFL----YIETSLLSFLDVSNSSLSRFCFL 184
+ D+ + N L + GT E +L ++T L V + F L
Sbjct: 215 VTDAGFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDG---FVHL 271
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+MK L++L L + + +E + + L++L++S T F G+ I G NLE L+
Sbjct: 272 KEMKQLQNLMLRQTRVAGAGMENLIGIDT-LKSLDVSETPFGDDGL-IHVGKFKNLEKLN 329
Query: 245 LSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
L T++ + + +++L +++ L
Sbjct: 330 LWFTKVTPDGLPH------------------------------------IKDLTNMKTLI 353
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L+ ++D +L L ++L LSL+ N +T+ S+ L L L +SI + + G+
Sbjct: 354 LDYQGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQLKGLKKISITFTQIDSRGV 413
Query: 364 GSFK 367
K
Sbjct: 414 AELK 417
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 80/364 (21%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
LS L+++ +L + G VTD + +L + L + +S+ G L LS L L
Sbjct: 79 LSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSVLQL 138
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
T N+SN +++S+L+ L K+ Y++
Sbjct: 139 RRT--------------NISNKSLESMLQ-------LPKLR--------------YLD-- 161
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L + D++++ + + +M +E L L +++GD+ + + + + L+ LN+ T +
Sbjct: 162 -LRYDDITDAGME---IVAKMPNMEVLRLEGAIVGDEGLAHLTGL-SKLKFLNVRGTNVT 216
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFI------ 278
AG +A +L NLE L +GT + + Y++ + +K +++ +K GF+
Sbjct: 217 DAGFKSIA-NLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMK 275
Query: 279 ----------QQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQV 310
+ GA + ++ + L++L+ +LE+LNL T+V
Sbjct: 276 QLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKFKNLEKLNLWFTKV 335
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPP 369
+ L + + L L +TD SL L + KL LS++D ++TN + K
Sbjct: 336 TPDGLPHIKDLTNMKTLILDYQGITDDSLENLVGMQKLQTLSLKDNDMITNESIKYLKQL 395
Query: 370 RSLK 373
+ LK
Sbjct: 396 KGLK 399
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 27/237 (11%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R VTDAG K + +++ LE L + T LT +G+ L+ L + L+L V D
Sbjct: 211 RGTNVTDAGFKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVH 270
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
L+ + +L+ L L ++V+ G L L L+++ T G+ + +LE LNL
Sbjct: 271 LKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSETPFGDDGLIHVGKFKNLEKLNL 330
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 185
K++ G I + ++T +L + +++ SL +
Sbjct: 331 W----------------FTKVTPDGLPHIKD---LTNMKTLILDYQGITDDSLENLVGMQ 371
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+++ L D + MI ++S++ + + L+ ++++ T+ S GV L LP LE+
Sbjct: 372 KLQTLSLKD--NDMITNESIKYLKQL-KGLKKISITFTQIDSRGVAELKKELPGLEV 425
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
L G +ER + S+ SF D LS+ +K ++ L + + + D +++
Sbjct: 48 ELGGRLTKDERGVVTVADMSVASFSDEQLEPLSK------LKHVKILKVYGADVTDKTID 101
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 266
+ + +LR+ + +NT S AG+ L+ L +L +L L T I + ++ M +P L++
Sbjct: 102 NLLQM-KDLRDFSAANTTISDAGIEKLSA-LKDLSVLQLRRTNISNKSLESMLQLPKLRY 159
Query: 267 IDISNTDIKGFIQQVGA----------ETDLV--LSLTALQNLNHLERLNLEQTQVSDAT 314
+D+ DI ++ A E +V L L L+ L+ LN+ T V+DA
Sbjct: 160 LDLRYDDITDAGMEIVAKMPNMEVLRLEGAIVGDEGLAHLTGLSKLKFLNVRGTNVTDAG 219
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
++ L L +LT + L+ L+K+ L + A + + G K + L+
Sbjct: 220 FKSIANLTNLETLETNGTALTTEGMEYLAPLTKVKTLELMRAQVKDDGFVHLKEMKQLQ 278
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T +K L+L R +V D G HL + L+ L L +T + G+ L + L LD+
Sbjct: 250 LTKVKTLELMRA-QVKDDGFVHLKEMKQLQNLMLRQTRVAGAGMENLIGIDTLKSLDVSE 308
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
P D L + LE L+LW ++V+ G +K + L L + G+T
Sbjct: 309 TPFGDDGLIHVGKFKNLEKLNLWFTKVTPDGLPHIKDLTNMKTLILDYQGIT 360
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L L H++ L + V+D T+ L K+L S N +++D + +LS+L L+
Sbjct: 76 LEPLSKLKHVKILKVYGADVTDKTIDNLLQMKDLRDFSAANTTISDAGIEKLSALKDLSV 135
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
L +R ++N L S L+ LDL + DA ++ P +EV
Sbjct: 136 LQLRRTNISNKSLESMLQLPKLRYLDLR--YDDITDAGMEIVAKMPNMEV 183
>gi|406831735|ref|ZP_11091329.1| hypothetical protein SpalD1_08854 [Schlesneria paludicola DSM
18645]
Length = 422
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 37/347 (10%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
LL SL NL+ LD+ + +T+ LR L L L L + G +++ G L L+ L
Sbjct: 71 LLKSLPNLTSLDVSAIVITEDGLRELGQLKFLRRLVVDGRSITDEGLMELVDLRSLTELT 130
Query: 106 LAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
++ T VT L S L I S LE LAG ER I
Sbjct: 131 ISATSVTDEGLKQFQSF----LPQLRILSDLESVRR--------LAGFGGEIERSDGRVI 178
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
SL + + + L ++ LE LDL + I D ++ V + L L L +T
Sbjct: 179 RISLHNKPQFGDGDIES---LMSLRHLESLDLGGTSITDGALLTVGRL-QKLIQLQLPST 234
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNTDIKGFIQQV 281
R + G+ L +L L IL LS T+I D + + +P SL D TD
Sbjct: 235 RITDRGLKALR-NLKQLSILDLSRTRIGDVGLDEIKKLPLTSLMLHDTQVTD-------- 285
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
L ALQ+L ++ L L + ++D L L F+ L L L + +TD L
Sbjct: 286 -------FGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELCLNSTRITDGGLRN 338
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+ L KL L + D+ +T++GL + +L L L G +T+D++
Sbjct: 339 VGQLRKLRILQLGDSQITDAGLLELRHLNNLVGLVLRGTR-VTDDSV 384
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 28/242 (11%)
Query: 41 ADG-IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 99
DG I L SL++L LDLGG +TD L ++ L KL L L +++++RG L+
Sbjct: 189 GDGDIESLMSLRHLESLDLGGTSITDGALLTVGRLQKLIQLQLPSTRITDRGLKALRNLK 248
Query: 100 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
+LS L+L+ T + + +D I K PL + L T + +
Sbjct: 249 QLSILDLSRT--------------RIGDVGLDEI-----KKLPLTSLMLHDTQ-VTDFGL 288
Query: 160 FLYIETSLLSFLDVSNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
+ + FL + +++ +T + + L L L+S+ I D + V + LR
Sbjct: 289 LALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELCLNSTRITDGGLRNVGQL-RKLRI 347
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L L +++ + AG+ L HL NL L L GT++ D +++ + +L ID+ T GF
Sbjct: 348 LQLGDSQITDAGLLELR-HLNNLVGLVLRGTRVTDDSVNTLKRYQNLVHIDLRQT---GF 403
Query: 278 IQ 279
+
Sbjct: 404 TE 405
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VTD G+ L + ++ L L + +T G+ L QNLS L L +TD LR++
Sbjct: 282 QVTDFGLLALQDLKEVQFLGLYKCAITDTGLVTLGRFQNLSELCLNSTRITDGGLRNVGQ 341
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L KL L L SQ+++ G L+ L L L T VT
Sbjct: 342 LRKLRILQLGDSQITDAGLLELRHLNNLVGLVLRGTRVT 380
>gi|406830023|ref|ZP_11089617.1| hypothetical protein SpalD1_00247 [Schlesneria paludicola DSM
18645]
Length = 374
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 162/342 (47%), Gaps = 42/342 (12%)
Query: 65 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
D + +L+ TK+ L+L +++++ G ++ F L+ L LA+T G+ +L ++ +
Sbjct: 65 DGYVHALKPFTKMTSLNLNSTKITDSGLKGIRNFTSLTMLTLAFTKITDVGLVELKDLKN 124
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L L+L CT I+ G I E + + S F DV L+
Sbjct: 125 LTRLDLGGCT---------------AITDVGLNEIKELTSLASLHLSYTQFTDVGLKELA 169
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
+K L +L+L + I DD ++ + + + R + T+ S G+ L G L N
Sbjct: 170 ------DLKCLSNLELRGTQITDDGLKELGTLTSLTRLTLMQ-TKISDLGLRELKG-LRN 221
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+IL L T+I D + + + + + + F ++ E + ++ LN+
Sbjct: 222 LQILDLGLTEITDEGLKEIIDLKQIHSLYL-------FGDEITDE-----GMQSIGELNN 269
Query: 300 LERLNLEQTQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L L+L QT++++ L +S L + +TDV L ++ ++++LTN+++ +
Sbjct: 270 LTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITDVGLKEIGTMTQLTNINLGRTGI 329
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
TN+GL + ++L+ LD+ +T + ++ K P++++
Sbjct: 330 TNAGLKELRNLKNLQSLDVSETE-VTSEGVVALQKELPKLDI 370
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 33/318 (10%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-LPVTDLVLRSLQ 72
K+TD+G+K + + ++L L L+ T +T G+ L L+NL+ LDLGG +TD+ L ++
Sbjct: 86 KITDSGLKGIRNFTSLTMLTLAFTKITDVGLVELKDLKNLTRLDLGGCTAITDVGLNEIK 145
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
LT L L L +Q ++ G L LS L L T +T + E L++ T +
Sbjct: 146 ELTSLASLHLSYTQFTDVGLKELADLKCLSNLELRGTQIT---DDGLKELGTLTSLTRLT 202
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
+++ KIS G + E + ++ L ++++ L L Q+ +L
Sbjct: 203 LMQ--------TKISDLG---LRELKGLRNLQILDLGLTEITDEGLKEIIDLKQIHSLY- 250
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L I D+ ++ + + NL L+L T ++ G+ ++G ++ L+ +I D
Sbjct: 251 --LFGDEITDEGMQSIGELN-NLTELDLIQTEITNEGLKEISGLKNLKKLHLLNDGKITD 307
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
+ + M L I++ T I L L+NL +L+ L++ +T+V+
Sbjct: 308 VGLKEIGTMTQLTNINLGRTGITNA------------GLKELRNLKNLQSLDVSETEVTS 355
Query: 313 ATLFPLSTFKELIHLSLR 330
+ L KEL L ++
Sbjct: 356 EGVVALQ--KELPKLDIK 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL C +TD G+ + +++L L LS T T G+ L+ L+ LS L+L G +
Sbjct: 125 LTRLDLGGCTAITDVGLNEIKELTSLASLHLSYTQFTDVGLKELADLKCLSNLELRGTQI 184
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--------KLP 115
TD L+ L LT L L L +++S+ G LK L L+L T +T L
Sbjct: 185 TDDGLKELGTLTSLTRLTLMQTKISDLGLRELKGLRNLQILDLGLTEITDEGLKEIIDLK 244
Query: 116 NISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
I SL +++ + SI E N L ++ L T NE + +L +
Sbjct: 245 QIHSLYLFGDEITDEGMQSIGELNN----LTELDLIQTEITNEGLKEISGLKNLKKLHLL 300
Query: 174 SNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
++ ++ + M L +++L + I + ++ + + NL++L++S T +S GV
Sbjct: 301 NDGKITDVGLKEIGTMTQLTNINLGRTGITNAGLKELRNL-KNLQSLDVSETEVTSEGVV 359
Query: 232 ILAGHLPNLEI 242
L LP L+I
Sbjct: 360 ALQKELPKLDI 370
>gi|406832962|ref|ZP_11092556.1| hypothetical protein SpalD1_15024 [Schlesneria paludicola DSM
18645]
Length = 236
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 179 SRFC--FLTQMKALEHL---DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
SRF FL +K L+ L DL + IGD ++ +A + NL L LSN + AG+ L
Sbjct: 58 SRFNGKFLHLVKGLDQLTSLDLRKTDIGDTHLKEIAEL-ENLTTLRLSNVPITDAGLIEL 116
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
L L L+GT+I D + +S+ SL+++D+S T I G + L
Sbjct: 117 RSQ-KKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITG------------MGLKD 163
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
L L +L LNLE T+V+D L + FK LI ++LR S+TD S
Sbjct: 164 LSGLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVTDAGQKAFS 213
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLDLGG 60
L LDL + TD G HL I+ LE L LS +T G+ L S + LS LDL G
Sbjct: 74 LTSLDLRK----TDIGDTHLKEIAELENLTTLRLSNVPITDAGLIELRSQKKLSTLDLAG 129
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TD L+ L V L YLDL + ++ G L P L LNL T V N + L
Sbjct: 130 TRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLNLENTKV----NDTGL 185
Query: 121 ECLN 124
EC++
Sbjct: 186 ECVH 189
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
V +TDAG+ L S L L L+ T +T DG+ LS +L LDL +T + L+ L
Sbjct: 106 VPITDAGLIELRSQKKLSTLDLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLS 165
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L L L+L ++V++ G + F L +NL T VT
Sbjct: 166 GLPNLLSLNLENTKVNDTGLECVHEFKHLIRINLRRTSVT 205
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 22 HLL-SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
HL+ + L L L +T + + ++ L+NL+ L L +P+TD L L+ KL L
Sbjct: 66 HLVKGLDQLTSLDLRKTDIGDTHLKEIAELENLTTLRLSNVPITDAGLIELRSQKKLSTL 125
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI-DSIL 134
DL G+++++ G L + L +L+L+ T G+ L + +L LNL N + D+ L
Sbjct: 126 DLAGTRITDDGLKELSVHHSLRYLDLSETTITGMGLKDLSGLPNLLSLNLENTKVNDTGL 185
Query: 135 EGNENKAPLAKISLAGTTFINE-REAF 160
E L +I+L T+ + ++AF
Sbjct: 186 ECVHEFKHLIRINLRRTSVTDAGQKAF 212
>gi|290979790|ref|XP_002672616.1| predicted protein [Naegleria gruberi]
gi|284086194|gb|EFC39872.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 151/340 (44%), Gaps = 45/340 (13%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G K + + L L +S + +G +S ++ L+ L++ + D ++ +
Sbjct: 254 EIGDEGAKFISEMKQLISLDISNNLIDIEGAKSISEMKQLTSLEIYYNEIGDEGVKFISK 313
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNC 128
+ +L LD+ G+Q+ GA + +L+FL + G + + L LN+
Sbjct: 314 MEQLTSLDISGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGANSISEMKQLTSLNIYYN 373
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQ 186
I G+E G FI+E E L+ LD+ + + +++
Sbjct: 374 QI-----GDE-----------GVKFISEMEQ--------LTSLDIGGNQIGVGGAKSISE 409
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
MK L L + S+ IGD+ V+ ++ + L +LN+S R G ++ + L +L +S
Sbjct: 410 MKQLTFLQIFSNRIGDEGVKFISEM-KQLTSLNISGNRIGDEGAKSIS-EMKQLTLLYIS 467
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
+I D + ++S M L + I + ++G E + ++ + L LN+
Sbjct: 468 SNEIGDEGVKFISEMKQLTLLQI-------YSNRIGDE-----GVKSISEMKQLTSLNIS 515
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
++ D + +S K+L L++ N + D + L+SL+
Sbjct: 516 GNRIGDEGVKSISEMKQLTSLNISNNRIGDEGVKLLTSLN 555
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 163/365 (44%), Gaps = 27/365 (7%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
K + + L L ++E + +G+ +S ++ L++LD+ + S+ + +L L
Sbjct: 117 KFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQLTSL 176
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLPNISSLECLNLSNCTIDSI-- 133
++ G+++ + GA ++ +L+ LN+A G + + L L++S+ I +
Sbjct: 177 NISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSISDNEIGVVGA 236
Query: 134 -LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKAL 190
L N+ L IS I + A E L LD+SN+ + +++MK L
Sbjct: 237 KLISEMNQLTLLNIS---NNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSISEMKQL 293
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
L++ + IGD+ V+ ++ + L +L++S + G ++ + L L + +I
Sbjct: 294 TSLEIYYNEIGDEGVKFISKM-EQLTSLDISGNQIGVGGAKSIS-EMKQLTFLQIFSNRI 351
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D + +S M L ++I + Q+G E + + + L L++ Q+
Sbjct: 352 GDEGANSISEMKQLTSLNI-------YYNQIGDE-----GVKFISEMEQLTSLDIGGNQI 399
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
+S K+L L + + + D + +S + +LT+L+I + + G S +
Sbjct: 400 GVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGAKSISEMK 459
Query: 371 SLKLL 375
L LL
Sbjct: 460 QLTLL 464
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 169/391 (43%), Gaps = 41/391 (10%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C ++ G + + L L +S + +G L+S ++ L++L++ + +S+
Sbjct: 156 CNEIGVEGATSISEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSI 215
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
+ +L L + +++ GA ++ +L+ LN++ G + + L L++S
Sbjct: 216 SEMKQLTSLSISDNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDIS 275
Query: 127 NCTIDSILEGNENKAPLAK----------ISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
N ID +EG ++ + + + I G FI++ E L+ LD+S +
Sbjct: 276 NNLID--IEGAKSISEMKQLTSLEIYYNEIGDEGVKFISKMEQ--------LTSLDISGN 325
Query: 177 SLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+ +++MK L L + S+ IGD+ ++ + L +LN+ + GV ++
Sbjct: 326 QIGVGGAKSISEMKQLTFLQIFSNRIGDEGANSISEM-KQLTSLNIYYNQIGDEGVKFIS 384
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
+ L L + G QI +S M L F+ I F ++G E + +
Sbjct: 385 -EMEQLTSLDIGGNQIGVGGAKSISEMKQLTFLQI-------FSNRIGDE-----GVKFI 431
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+ L LN+ ++ D +S K+L L + + + D + +S + +LT L I
Sbjct: 432 SEMKQLTSLNISGNRIGDEGAKSISEMKQLTLLYISSNEIGDEGVKFISEMKQLTLLQIY 491
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+ + G+ S + L L++ G + E
Sbjct: 492 SNRIGDEGVKSISEMKQLTSLNISGNRIGDE 522
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 159/358 (44%), Gaps = 31/358 (8%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 101
D +S ++ L+ L + + D ++ + + +L LD+ +++ GA + +L
Sbjct: 114 DNAKFISEMKQLTSLGIAENRIGDEGVKFISEMKQLTLLDICCNEIGVEGATSISEMKQL 173
Query: 102 SFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
+ LN++ G + + L LN+++ I +EG ++ + + +++ + I++
Sbjct: 174 TSLNISGNRIGDEGAKLISEMKQLTLLNIADNRI--CVEGAKSISEMKQLT---SLSISD 228
Query: 157 RE-----AFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
E A L E + L+ L++SN+ + F+++MK L LD+S+++I + + ++
Sbjct: 229 NEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSIS 288
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ L +L + GV ++ + L L +SG QI +S M L F+ I
Sbjct: 289 EM-KQLTSLEIYYNEIGDEGVKFIS-KMEQLTSLDISGNQIGVGGAKSISEMKQLTFLQI 346
Query: 270 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
F ++G E ++ + L LN+ Q+ D + +S ++L L +
Sbjct: 347 -------FSNRIGDE-----GANSISEMKQLTSLNIYYNQIGDEGVKFISEMEQLTSLDI 394
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ +S + +LT L I + + G+ + L L++ G + E A
Sbjct: 395 GGNQIGVGGAKSISEMKQLTFLQIFSNRIGDEGVKFISEMKQLTSLNISGNRIGDEGA 452
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV--GILA 234
SL F+++MK L L ++ + IGD+ V+ ++ ++ L L + + GV
Sbjct: 112 SLDNAKFISEMKQLTSLGIAENRIGDEGVKFIS----EMKQLTLLDICCNEIGVEGATSI 167
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDL--- 287
+ L L++SG +I D +S M L ++I++ I +G I ++ T L
Sbjct: 168 SEMKQLTSLNISGNRIGDEGAKLISEMKQLTLLNIADNRICVEGAKSISEMKQLTSLSIS 227
Query: 288 -----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
V+ + +N L LN+ ++ D +S K+LI L + N + +
Sbjct: 228 DNEIGVVGAKLISEMNQLTLLNISNNEIGDEGAKFISEMKQLISLDISNNLIDIEGAKSI 287
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
S + +LT+L I + + G+ L LD+ G +
Sbjct: 288 SEMKQLTSLEIYYNEIGDEGVKFISKMEQLTSLDISGNQI 327
>gi|149175664|ref|ZP_01854283.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
gi|148845383|gb|EDL59727.1| hypothetical protein PM8797T_31103 [Planctomyces maris DSM 8797]
Length = 660
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 163/381 (42%), Gaps = 65/381 (17%)
Query: 21 KHLLSIST---LEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTK 76
+HL +ST LEKL L GL D +A L SL L LDL G + D+ L L+ L +
Sbjct: 301 RHLNDLSTFRKLEKLALRNCGLDEDDVATLGSLTQLRELDLSGNSSLNDVALFHLRNLNQ 360
Query: 77 LEYLDL--WGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCT 129
LE L + + ++++ +G L+ +L L+L G+ + ++SSLE LNL
Sbjct: 361 LEELKVASYYNRITEKGLQYLRQPRKLKTLDLIGCMLKADGLAAIGDVSSLETLNLKVYC 420
Query: 130 IDSI-----------------------LEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
+ + L+G E + L+++ E EA ++T
Sbjct: 421 PERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLSSLSQLP--------ELEALHLLQTK 472
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L D+ ++ +L+ L L+S + D V + + L +LNL R
Sbjct: 473 LQDE-DIR--------WIANCNSLKALTLNSYEVTDQGVSSLGSL-KQLESLNLDRCRLD 522
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+G+ L L L +SL+ T + D I ++S + LK + + N +
Sbjct: 523 GSGLVSLQ-QLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRVSS---------- 571
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+L +L++L L LNL VSD L+ L L+L ++++ L L +
Sbjct: 572 --ATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKAT 629
Query: 347 KLTNLSIRDAVLTNSGLGSFK 367
L LS+R +T G+ +
Sbjct: 630 GLETLSLRRTKVTRQGVQQLR 650
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 62/385 (16%)
Query: 35 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 94
SE L L L L L L G+ + L +LE L L + +S++
Sbjct: 224 SEVRLAEIDFTQLRGLDGLRSLTLEGVNLYGRA-EGLGFFPRLEALTLINTNISDQDRGR 282
Query: 95 LKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSILEGNENKAPLA------ 144
+ F +L L L + + L LE L L NC +D ++ A L
Sbjct: 283 ITTFTQLKTLRLENVHLGRHLNDLSTFRKLEKLALRNCGLDE-----DDVATLGSLTQLR 337
Query: 145 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-----FLTQMKALEHLDLSSSM 199
++ L+G + +N+ F + L L V+ S +R +L Q + L+ LDL M
Sbjct: 338 ELDLSGNSSLNDVALFHLRNLNQLEELKVA-SYYNRITEKGLQYLRQPRKLKTLDLIGCM 396
Query: 200 IGDDSVEMVACVGANLRNLNLS--------------------------NTRFSSAGVGIL 233
+ D + + V ++L LNL R G G+
Sbjct: 397 LKADGLAAIGDV-SSLETLNLKVYCPERVDAHFFDPLRHLKSLRELTLECRQLKGGEGLS 455
Query: 234 A-GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
+ LP LE L L T++ D I +++ SLK + +++ ++ TD +S
Sbjct: 456 SLSQLPELEALHLLQTKLQDEDIRWIANCNSLKALTLNSYEV----------TDQGVS-- 503
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
+L +L LE LNL++ ++ + L L L +SL + +TD + LSSLS+L L+
Sbjct: 504 SLGSLKQLESLNLDRCRLDGSGLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLT 563
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDL 377
+ + ++++ L S K + L L+L
Sbjct: 564 LENGRVSSATLESLKDLKKLSELNL 588
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDA + L S+S L++L L +++ + L L+ LS L+L PV+D + L +
Sbjct: 545 VTDAVIPFLSSLSQLKRLTLENGRVSSATLESLKDLKKLSELNLTNCPVSDEICELLTQM 604
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
+ L L+L ++VSN G L+ L L+L T VT+ + L + L++C I
Sbjct: 605 SALRTLNLNKTKVSNIGLEGLQKATGLETLSLRRTKVTR-QGVQQLRTV-LADCQI 658
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+L RC ++ +G+ L + L + L+ TG+T I LSSL L L L V
Sbjct: 511 LESLNLDRC-RLDGSGLVSLQQLHRLTDVSLNHTGVTDAVIPFLSSLSQLKRLTLENGRV 569
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
+ L SL+ L KL L+L VS+ +L L LNL T G+ L +
Sbjct: 570 SSATLESLKDLKKLSELNLTNCPVSDEICELLTQMSALRTLNLNKTKVSNIGLEGLQKAT 629
Query: 119 SLECLNLSNCTI 130
LE L+L +
Sbjct: 630 GLETLSLRRTKV 641
>gi|168704615|ref|ZP_02736892.1| leucine-rich repeat domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 154 INEREAFLYIETSLLSFLD--VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
+ E AF ++ ++LS D VS++ L LT K L L LS + + D ++ VA +
Sbjct: 64 LKELAAFKHL--AVLSLYDTQVSDAGLKE---LTSSKGLTELLLSRTKVTDAGLKDVAKL 118
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
+L L L T + AG+G L L L L L GT+I D A ++ + L + +
Sbjct: 119 -THLEKLALDETAVTDAGIGELV-PLKRLSELWLMGTKITDAAFKNVAKLKGLTTLRLDG 176
Query: 272 TDIKGF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
I G ++QV A ++ L L T +S+A L ++ FK L L L
Sbjct: 177 AKITGVGLKQVAA-------------IDGFHSLYLSGTDISEAGLKEIAAFKSLRILQLS 223
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+TD L +L++L KLT L + +T++G+ S + LK+L L
Sbjct: 224 ECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHL 270
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L EL LSR KVTDAG+K + ++ LEKL L ET +T GI L L+ LS L L G +
Sbjct: 97 LTELLLSR-TKVTDAGLKDVAKLTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKI 155
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRG---AAVLKMFPR--LSFLNLAWTGVTKLPNIS 118
TD +++ L L L L G++++ G A + F LS +++ G+ ++
Sbjct: 156 TDAAFKNVAKLKGLTTLRLDGAKITGVGLKQVAAIDGFHSLYLSGTDISEAGLKEIAAFK 215
Query: 119 SLECLNLSNCTI 130
SL L LS C I
Sbjct: 216 SLRILQLSECKI 227
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 27/249 (10%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ DA +K L + L L L +T ++ G+ L+S + L+ L L VTD L+ +
Sbjct: 58 KIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAK 117
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSNCTID 131
LT LE L L + V++ G L RLS L L T +T N++ L+ L+ +D
Sbjct: 118 LTHLEKLALDETAVTDAGIGELVPLKRLSELWLMGTKITDAAFKNVAKLK--GLTTLRLD 175
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
AKI+ G + + F LY LS D+S + L + K+
Sbjct: 176 G-----------AKITGVGLKQVAAIDGFHSLY-----LSGTDISEAGLKE---IAAFKS 216
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L L LS I D ++ +A + L L+L T+ + AGV LA L L++L L+ TQ
Sbjct: 217 LRILQLSECKITDGGLKELAALD-KLTTLHLEKTQVTDAGVKSLA-SLKKLKVLHLTSTQ 274
Query: 250 IDDYAISYM 258
+ D + +
Sbjct: 275 VTDAGVKTI 283
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L HL L+L TQVSDA L L++ K L L L +TD L ++ L+ L
Sbjct: 64 LKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGLKDVAKLTHLEK 123
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L++ + +T++G+G P + L L L G
Sbjct: 124 LALDETAVTDAGIGELVPLKRLSELWLMG 152
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+++AG+K + + +L L LSE +T G+ L++L L+ L L VTD ++SL L
Sbjct: 203 ISEAGLKEIAAFKSLRILQLSECKITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASL 262
Query: 75 TKLEYLDLWGSQVSNRGAAVLK 96
KL+ L L +QV++ G ++
Sbjct: 263 KKLKVLHLTSTQVTDAGVKTIR 284
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L LS C K+TD G+K L ++ L L L +T +T G+ L+SL+ L VL L V
Sbjct: 217 LRILQLSEC-KITDGGLKELAALDKLTTLHLEKTQVTDAGVKSLASLKKLKVLHLTSTQV 275
Query: 64 TDLVLRSLQ 72
TD +++++
Sbjct: 276 TDAGVKTIR 284
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
LE T+++DA L L+ FK L LSL + ++D L +L+S LT L + +T++GL
Sbjct: 54 LEGTKIADADLKELAAFKHLAVLSLYDTQVSDAGLKELTSSKGLTELLLSRTKVTDAGL 112
>gi|307107435|gb|EFN55678.1| hypothetical protein CHLNCDRAFT_133919 [Chlorella variabilis]
Length = 553
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 171/408 (41%), Gaps = 100/408 (24%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADG------------------- 43
L +L L CV +TD G+ L +++LE+L L+ LTA G
Sbjct: 123 LAQLCLDYCVDLTDGGLALLQGMTSLEELSLAGCELLTAVGMGHLRGLTRLRRLSLQTCH 182
Query: 44 ---IALLSSLQNLSVLDLG--------GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG- 91
+A L+ L+ L LD+G VTD L L L +L L+L G +VS+
Sbjct: 183 QISLAPLAQLRQLEQLDVGWCSSLDDSDAQVTDHGLACLHSLGQLRALNLAGVRVSDEAL 242
Query: 92 AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 151
AA+L+ P L LNL CL + ++ ++ ++ L ++ L G
Sbjct: 243 AALLRHLPHLRALNLE-------------RCLQAGDASLAAV---SQRALQLRELHL-GY 285
Query: 152 TFINEREAFLYIETSLLSFLDVSNSS-----LSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
T +++R L + L L + N S L+ LTQM+ LDLS + ++++
Sbjct: 286 TAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMR---QLDLSDTSASNETMS 342
Query: 207 MVACV-----------GAN------------LRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
VA + G N LR LNL + F+ AG+ + L LE L
Sbjct: 343 TVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAGM-VSVAQLAGLECL 401
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE-- 301
L G +I D + +S + +L+ +++ G + G V L AL L HL
Sbjct: 402 DLFGARIGDAGCASLSKLKNLRRLEVCG----GGVTDAG-----VAHLVALTRLQHLSLA 452
Query: 302 -------RLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQ 341
L +VS++ + L EL+ L+L A + T +LH+
Sbjct: 453 QASACWGSCTLPNYRVSNSCILHLIKLNELMALNLSQACACTTQNLHR 500
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 56/278 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T +++LDLS ++ M + ++ LE L LS TG+ G+ L L +L L+L
Sbjct: 323 LTQMRQLDLSD-TSASNETMSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDS 381
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
TD + S+ L LE LDL+G+++ + G A L L L + GVT L
Sbjct: 382 RHFTDAGMVSVAQLAGLECLDLFGARIGDAGCASLSKLKNLRRLEVCGGGVTDAGVAHLV 441
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ L+ L+L+ A T N R VSN
Sbjct: 442 ALTRLQHLSLAQ----------------ASACWGSCTLPNYR---------------VSN 470
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
S + L ++ A L+LS + AC NL R +S V + G
Sbjct: 471 SCILHLIKLNELMA---LNLS---------QACACT-----TQNLHRCRVTSNSV-VALG 512
Query: 236 HLPNLEILSLSGTQIDDYAI-SYMSMMPSLKFIDISNT 272
LP L+ L+L T++ +A+ ++ P L ++ T
Sbjct: 513 CLPKLQTLALYETRVKPFAVDKLLAANPDLCVQGVAPT 550
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 81/201 (40%), Gaps = 41/201 (20%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMV-----ACVG--ANLRNLNLSNTRFSSAGVGILAGH 236
L Q++ LE LD+ DDS V AC+ LR LNL+ R S + L H
Sbjct: 189 LAQLRQLEQLDVGWCSSLDDSDAQVTDHGLACLHSLGQLRALNLAGVRVSDEALAALLRH 248
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
LP+L L+L Q G + +S ALQ
Sbjct: 249 LPHLRALNLE------------------------------RCLQAGDASLAAVSQRALQ- 277
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L+L T VSD L L +L LSL N S+ D L LS L+++ L + D
Sbjct: 278 ---LRELHLGYTAVSDRGLLLLGGLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDT 334
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+N + + R L+ L+L
Sbjct: 335 SASNETMSTVAAMRQLECLNL 355
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFS 226
L+ + VS+ +L+ L + L L+L + GD S+ V+ LR L+L T S
Sbjct: 232 LAGVRVSDEALAAL--LRHLPHLRALNLERCLQAGDASLAAVSQRALQLRELHLGYTAVS 289
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
G+ +L L L +LSL + D ++ +S + ++ +D+S+T ET
Sbjct: 290 DRGLLLLG-GLTQLHVLSLENCSVGDGGLAVLSHLTQMRQLDLSDTSASN-------ET- 340
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
++ + + LE LNL T V+D L L L L+L + TD + ++ L+
Sbjct: 341 ----MSTVAAMRQLECLNLSFTGVNDLGLKRLRRLSSLRCLNLDSRHFTDAGMVSVAQLA 396
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
L L + A + ++G S ++L+ L++ GG
Sbjct: 397 GLECLDLFGARIGDAGCASLSKLKNLRRLEVCGG 430
>gi|290979162|ref|XP_002672303.1| predicted protein [Naegleria gruberi]
gi|284085879|gb|EFC39559.1| predicted protein [Naegleria gruberi]
Length = 371
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 19/272 (6%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G KHL ++ L L+ + + +G+ + L+ LS L++ V D + L L
Sbjct: 86 IGDEGAKHLSALKQLTYLYTAFNNIGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSEL 145
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
+L L++ S + +G + +L+ LN++ G + + L CLN+
Sbjct: 146 KQLTNLNISNSNICAKGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSN 205
Query: 130 IDSILEGNENKAPLAKISLAGTTFIN-EREAFLYI-ETSLLSFLDVSNSSLSRFC----- 182
ID +EG + + + +++ ++ N E YI + L+ L + N+ + C
Sbjct: 206 ID--IEGAKYISEMKQLTDLNISYNNIGIEGAKYIGKLKQLTCLTIYNNYI---CDEGAK 260
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+++++ L +L++ S+ IGD+ + ++ + L NL++S + + GV +A L L I
Sbjct: 261 YISELNQLTNLNIYSNNIGDEGAKYISEL-KQLTNLDISVNQIGAKGVKYIA-ELNQLTI 318
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
LS S I D Y+S + L +DIS+ +I
Sbjct: 319 LSASLNNIRDEGAKYISELKQLTNLDISSNNI 350
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 159/379 (41%), Gaps = 59/379 (15%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ G K++ + L L +S + A+G+ + +L+ L+ L + + D + L
Sbjct: 37 KIGVEGAKYISELKQLTNLDISYNNIGAEGVEHIGNLKQLTFLCIYHNNIGDEGAKHLSA 96
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
L +L YL + + G + +LS+LN+ G L + L LN+SN
Sbjct: 97 LKQLTYLYTAFNNIGVEGVKYIIKLKQLSYLNICSNKVGDEGAKYLSELKQLTNLNISNS 156
Query: 129 TIDSILEGNENKAPLAKISLAGTTFIN-EREAFLYI-ETSLLSFLDV--SNSSLSRFCFL 184
I + +G E+ + ++++ + N E YI + L+ L++ SN + ++
Sbjct: 157 NICA--KGVEHITEMNQLTILNISTNNIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYI 214
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEI 242
++MK L L++S + IG + + + + L L + N G ++ L NL I
Sbjct: 215 SEMKQLTDLNISYNNIGIEGAKYIGKL-KQLTCLTIYNNYICDEGAKYISELNQLTNLNI 273
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
S I D Y+S + L +DIS + Q+GA+
Sbjct: 274 YS---NNIGDEGAKYISELKQLTNLDIS-------VNQIGAK------------------ 305
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV---SLHQLSSLSKLTNLSIRDAVLT 359
+ EL L++ +ASL ++ +S L +LTNL I ++
Sbjct: 306 --------------GVKYIAELNQLTILSASLNNIRDEGAKYISELKQLTNLDISSNNIS 351
Query: 360 NSGLGSFKPPRSLKLLDLH 378
G+ F+ + L +L+++
Sbjct: 352 IEGVKCFEEMKHLTVLEIY 370
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 137/313 (43%), Gaps = 49/313 (15%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAWTGVTKLPNISSLECLNLSNC 128
L +L +L + +++ GA + +L S+ N+ GV + N+ L L + +
Sbjct: 25 LKQLTHLYISSNKIGVEGAKYISELKQLTNLDISYNNIGAEGVEHIGNLKQLTFLCIYHN 84
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
I EG ++ + L +++ T F +N + ++ ++K
Sbjct: 85 NIGD--EGAKHLSALKQLTYLYTAF--------------------NNIGVEGVKYIIKLK 122
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L +L++ S+ +GD+ + ++ + L NLN+SN+ + GV + + L IL++S
Sbjct: 123 QLSYLNICSNKVGDEGAKYLSEL-KQLTNLNISNSNICAKGVEHIT-EMNQLTILNISTN 180
Query: 249 QIDDYAISYMSMMPSLKFIDI--SNTDIKG--FIQQVGAETDLVLSLTALQNLNHLERLN 304
I Y+ + L ++I SN DI+G +I ++ TDL +S +
Sbjct: 181 NIGIEGAKYIGKLKQLTCLNIYYSNIDIEGAKYISEMKQLTDLNISYN---------NIG 231
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
+E + + K+L L++ N + D +S L++LTNL+I + + G
Sbjct: 232 IEGAKY-------IGKLKQLTCLTIYNNYICDEGAKYISELNQLTNLNIYSNNIGDEGAK 284
Query: 365 SFKPPRSLKLLDL 377
+ L LD+
Sbjct: 285 YISELKQLTNLDI 297
>gi|449132603|ref|ZP_21768618.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448888282|gb|EMB18604.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 455
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 162/392 (41%), Gaps = 67/392 (17%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAGM++L S++ LE+L LS+T +T I + L VL L VTD L L L
Sbjct: 120 IDDAGMENLTSLTKLERLILSDTAITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGL 179
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+KL +DL + + + G L L+ + L + VT
Sbjct: 180 SKLRAIDLRNTNIGDAGMDPLAKIKTLADVQLEKSKVT---------------------- 217
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
+E LA + L +IN F Y T ++ ++ L Q LE L
Sbjct: 218 --DEGLVKLAPLPLK---YIN----FNYCTT-------INGPTMK---MLGQTPTLERLQ 258
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
S I D S+ + + + L +L + + G+ +A + L L + +DD
Sbjct: 259 GDYSKINDASMAELKGL-SKLTHLRIRGCDVTGEGIKHIANN-KALAKFELRDSSVDDKG 316
Query: 255 ISYMSMMPSLKFIDISNTDI---KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
+ +S +P++ +DIS + +G Q L L L L L +T+ +
Sbjct: 317 LEVISQLPAVTHVDISECRLASPEGIAQ--------------LGKLTGLTYLGLWETKTN 362
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKP 368
DATL L L+L++ S+TD SL L ++KL L++ L + L
Sbjct: 363 DATLEAFGELVNLEELNLKSTSVTDQSLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPN 422
Query: 369 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
+S+ + + G+ D I + HP ++V
Sbjct: 423 LKSMNVANTSIGF----DVIDTLAENHPDLQV 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 42/312 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L LS +TD ++ ++TLE L+L TG+T +G+ LL+ L L +DL
Sbjct: 131 LTKLERLILSDTA-ITDRTIETAGKMNTLEVLFLRRTGVTDEGLELLTGLSKLRAIDLRN 189
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------------ 108
+ D + L + L + L S+V++ G L P L ++N +
Sbjct: 190 TNIGDAGMDPLAKIKTLADVQLEKSKVTDEGLVKLAPLP-LKYINFNYCTTINGPTMKML 248
Query: 109 ------------------TGVTKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISL 148
+ +L +S L L + C + + I NKA LAK L
Sbjct: 249 GQTPTLERLQGDYSKINDASMAELKGLSKLTHLRIRGCDVTGEGIKHIANNKA-LAKFEL 307
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSV 205
++ ++++ + + ++ +D+S L+ L ++ L +L L + D ++
Sbjct: 308 RDSS-VDDKGLEVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDATL 366
Query: 206 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 265
E + NL LNL +T + + +L + L+ L+++GTQ+ D + ++ +P+LK
Sbjct: 367 EAFGEL-VNLEELNLKSTSVTDQSLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLK 424
Query: 266 FIDISNTDIKGF 277
++++NT I GF
Sbjct: 425 SMNVANTSI-GF 435
>gi|344170515|emb|CCA82933.1| leucine-rich-repeat type III effector protein (GALA5) [blood
disease bacterium R229]
Length = 533
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 150/376 (39%), Gaps = 57/376 (15%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L ELDLSRC +T AG+ HL + L +L + + + +G LL++ L+ LD+
Sbjct: 141 LTELDLSRCRGPITAAGIAHLSHLP-LVRLNVRDQRIGVEGARLLANHPTLTSLDVSNGR 199
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ R+L T+L L + +++ GA L L+ L+++ G+
Sbjct: 200 IGPEGARALAGNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGI----------- 248
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
G+E LA + T +N + +E +
Sbjct: 249 -------------GDEGACALATNTK--LTALNVNRNRIGVEGA---------------K 278
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 279 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 336
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L + I D ++ SL + I + I GA+ AL L
Sbjct: 337 LRIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 384
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNL + DA S LI LS+R L+D L++ LT L D + ++G
Sbjct: 385 LNLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATTLAASKTLTTLDAGDNTIRDAG 444
Query: 363 LGSFKPPRSLKLLDLH 378
+ R+L LD+
Sbjct: 445 ARALAANRTLTTLDVR 460
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G++ L + + L L + T + ADG+ L++ + L+ L + + D R+L
Sbjct: 296 IGDEGVRALAANARLTTLNVERTRVGADGVGALAASKTLTSLRIDSNNIGDAGARALATN 355
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
T L L + + +S GA L L+ LNL + G+ + + + + I +
Sbjct: 356 TSLTTLHIESNGISPAGAQALAANTTLTTLNLGYNGIGD----AGAQAWSANTTLISLSV 411
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
N +S AG T + + ++ + D +L+ + L LD
Sbjct: 412 RRN-------GLSDAGATTLAASKTLTTLDAGDNTIRDAGARALA------ANRTLTTLD 458
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
+ S+ I + +A L +L+L N R + AGV
Sbjct: 459 VRSNEIENAGARALAA-NTGLASLDLRNNRVTEAGV 493
>gi|325106627|ref|YP_004267695.1| hypothetical protein Plabr_0042 [Planctomyces brasiliensis DSM
5305]
gi|324966895|gb|ADY57673.1| leucine-rich repeat-containing protein [Planctomyces brasiliensis
DSM 5305]
Length = 526
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 35/357 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L+E++L R V A +K L + LEKL L T T G++ L+ + L L LGG
Sbjct: 167 LVSLREVNLRRS-SVNGAALKWLQRLVLLEKLDLRNTNFTHHGLSFLTYFRRLRSLKLGG 225
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
+ D L L +LE LDL G+ +S++ L PRL L + T V+ L
Sbjct: 226 NRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRLYVPGTAVSDEGLQLLT 285
Query: 116 NISSLECLNLSNCTI-DSILEGNENKAPLAKIS-----LAGTTFINEREAFLY--IETSL 167
++S+L L++ + S ++ E +P KI L + I R+ +L
Sbjct: 286 SVSTLIALDVRKTAVTPSGVQQLEQHSPGLKIKSDAADLPSSHVIRSRDVLQMHGCHLTL 345
Query: 168 LSFLDV--------SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
DV ++ + F L +L+ L+L+ + + ++ + + + L++L
Sbjct: 346 SRSGDVIACQAGEDASPPIHWFSALESFSSLKSLELNRLALDGEQLQFLKNM-SQLQSLA 404
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
L F + +L L L L L T + D ++ + +PSL + +S T +
Sbjct: 405 LKQCTFPPEALSVLKS-LNRLAWLDLRDTPVSDESLQALGELPSLSNLCLSRTGVTA--- 460
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
G E SL++ L L + E Q+ D + L FK L HL +R ++T+
Sbjct: 461 -TGLE-----SLSSAPLLRDL--VIKECGQIGDPAVLALEKFKNLKHLDIRGTNITE 509
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 200/483 (41%), Gaps = 90/483 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS---TLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
L+ELDL+ C G K L TL KL + D + L+ L++L LDL G
Sbjct: 50 LQELDLTNC----PCGSKILAQPEFQETLLKLKCQNCDIDFDTLELIGQLRSLQELDLSG 105
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLP 115
+ D+ + L L +L + ++V++ G +K F L ++L + G+ L
Sbjct: 106 TSLDDIGMEKLSKLEQLRTFAIAKTRVTDNGLRYVKAFRFLKSIDLNQNKLSEAGLCHLE 165
Query: 116 NISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINEREAFL------------- 161
+ SL +NL +++ + L+ + L K+ L T F + +FL
Sbjct: 166 GLVSLREVNLRRSSVNGAALKWLQRLVLLEKLDLRNTNFTHHGLSFLTYFRRLRSLKLGG 225
Query: 162 -YIETS----LLSF-----LDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 209
IE LL F LD+S + +S L Q+ L+ L + + + D+ ++++
Sbjct: 226 NRIEDDGLFPLLQFPRLESLDLSGTPISDQAMKTLAQLPRLKRLYVPGTAVSDEGLQLLT 285
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI--------------------------- 242
V + L L++ T + +GV L H P L+I
Sbjct: 286 SV-STLIALDVRKTAVTPSGVQQLEQHSPGLKIKSDAADLPSSHVIRSRDVLQMHGCHLT 344
Query: 243 LSLSGTQIDDYA----------ISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLV 288
LS SG I A S + SLK ++++ + G F++ + L
Sbjct: 345 LSRSGDVIACQAGEDASPPIHWFSALESFSSLKSLELNRLALDGEQLQFLKNMSQLQSLA 404
Query: 289 L--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
L +L+ L++LN L L+L T VSD +L L L +L L +T L
Sbjct: 405 LKQCTFPPEALSVLKSLNRLAWLDLRDTPVSDESLQALGELPSLSNLCLSRTGVTATGLE 464
Query: 341 QLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
LSS L +L I++ + + + + + ++LK LD+ G +TE + P +
Sbjct: 465 SLSSAPLLRDLVIKECGQIGDPAVLALEKFKNLKHLDIRGTN-ITEQGFCVLTQDLPSCK 523
Query: 400 VWH 402
+ H
Sbjct: 524 IRH 526
>gi|46446912|ref|YP_008277.1| hypothetical protein pc1278 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400553|emb|CAF24002.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 731
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 190/421 (45%), Gaps = 60/421 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
LK L L C K+TD G+ +L + +L+ L L + LT G+A L+ L L L+L G
Sbjct: 349 LKALHLQECYKLTDTGLVYLAPLVSLQYLNLFDCIKLTDAGLAHLTPLVALRHLNLMGCN 408
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKL 114
+T+ L L+ L L++LDL +++ G A L L L NL G+ L
Sbjct: 409 KLTNAGLMHLRPLMALQHLDLSCCRNLTDAGLAHLAPLVALQHLCLSECTNLTGAGLAHL 468
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ +L+ LNL++C K++ AG + A +++ S +++
Sbjct: 469 KPLVNLQHLNLNSCY---------------KLTDAGLAHLTPLMALQHLDLSCCR--NLT 511
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTR-FSSAGVG 231
++ L+ L + AL+HLDL+ D+ + V L++LNLS R + AG+
Sbjct: 512 DAGLAH---LRPLVALQHLDLNCCKNFTDAGLTHLTPLVA--LQHLNLSCCRNLTDAGLA 566
Query: 232 ILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
L L L L+L+G D +++++ + +L+ +++ + + G E
Sbjct: 567 YLMP-LVALSHLNLAGCHNFTDAGLAHLAPLVALQHLNLGDC---YRLTNAGLE-----H 617
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLT 349
LT L L HL+ E +++DA L L L HL L LTD L L+ L L
Sbjct: 618 LTPLVALQHLDLSECE--KLTDAGLTHLVPLVALTHLDLSECDKLTDAGLAHLTPLEALQ 675
Query: 350 NLSIRDA-VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVIC 408
+L++ LT++GL P +L +D L +CK + + H S +
Sbjct: 676 HLNLNWCDKLTDAGLAHLTPLLAL------------QDLYLGYCKNFTEVGLAHFKSSVA 723
Query: 409 P 409
P
Sbjct: 724 P 724
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ LDLS C K+TDAG+ HL+ + L L LSE LT G+A L+ L+ L L+L
Sbjct: 621 LVALQHLDLSECEKLTDAGLTHLVPLVALTHLDLSECDKLTDAGLAHLTPLEALQHLNLN 680
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
+TD L L L L+ DL+ N L F
Sbjct: 681 WCDKLTDAGLAHLTPLLALQ--DLYLGYCKNFTEVGLAHF 718
>gi|422417931|ref|ZP_16494886.1| internalin-I [Listeria seeligeri FSL N1-067]
gi|313634795|gb|EFS01226.1| internalin-I [Listeria seeligeri FSL N1-067]
Length = 1687
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 54/366 (14%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+ L+ + L G+T I L +L L LD+ G VTD+ + L +L YLD +
Sbjct: 399 LPQLKTVALDGCGIT--NIGTLENLPKLEKLDIKGNKVTDI--SEITDLPRLSYLDASEN 454
Query: 86 QVSNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 142
Q++ G L P L +LNL+ V+ + N SL +N+SN +I + + E
Sbjct: 455 QLTTIGT--LAKLPLLDWLNLSENQLKDVSAINNFPSLNYINVSNNSITTFGKMTE---- 508
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG- 201
L + F + + + L L+VSN+ ++ + L++LD+ S+ I
Sbjct: 509 LPSLKEFYGQFNKVTDISMIHDMPNLRKLNVSNNLINNLGTFENLPKLQNLDIHSNKITN 568
Query: 202 -------------DDSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
D S +++ +G + +NLS+ R S G LP L+ L
Sbjct: 569 TTVIHDFPSLETYDASSNLISTLGTMDNLPEVTTINLSSNRIPSLEP---IGDLPKLDTL 625
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFIQQVGAETDL-------------V 288
++ + + +P+L+ +++++ I G + A +DL +
Sbjct: 626 LVNSNSSYLRTVGSLDGLPALQILELNSNYINYSGKEATLSAFSDLTNLTELSMKDNYYI 685
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ L+ L +L +L L L+ ++ D T PL EL L+L + D+S LSSL+KL
Sbjct: 686 VDLSGLSSLTNLRYLYLDNNKIVDVT--PLGNLTELRELTLGTNKIQDIS--ALSSLNKL 741
Query: 349 TNLSIR 354
TNL ++
Sbjct: 742 TNLVVK 747
>gi|406834160|ref|ZP_11093754.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 390
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R K+TDAG+K+L S+ L+KL LS T ++ G+ L +L NL L + VTD
Sbjct: 122 RATKITDAGLKYLSSVPRLQKLDLSRTKISDAGLEHLQTLVNLCELTIAETSVTDAGTAK 181
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
L L L L++ + V++ V+ P L+ L L +T + S +C +L+ ++
Sbjct: 182 LAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSL 241
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMK 188
D I PL +F+ E + L +L ++NS F + +K
Sbjct: 242 DGI--------PLTG------SFLKELKGI------PLEYLTLANSKCDGTTFKDVGTLK 281
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L+ L L + + +D+ A+L L+L NT+ + + L +P+L LS++ T
Sbjct: 282 NLKMLSLENCPV-EDASIASIAAIASLETLSLDNTKITEQAIVELK-DMPSLVSLSINST 339
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAE 284
I + + P+LK + NT + +G + + AE
Sbjct: 340 PISAEELRQLKATPNLKLVKAHNTKVTRGDVDALAAE 376
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
P L LSL T+I D + Y+S +P L+ +D+S T I L LQ L
Sbjct: 114 PQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKISDA------------GLEHLQTL 161
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
+L L + +T V+DA L+ K L L++ ++TD SL +S + L L +
Sbjct: 162 VNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPNLNTLILDGCN 221
Query: 358 LTNSGLGSFKPPRSLKLLDLHG 379
LT+ GL S K +SL L L G
Sbjct: 222 LTDVGLASLKDCQSLTFLSLDG 243
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+L+ + L+ LDLS + I D +E + + NL L ++ T + AG LAG L NL +
Sbjct: 133 YLSSVPRLQKLDLSRTKISDAGLEHLQTL-VNLCELTIAETSVTDAGTAKLAG-LKNLRV 190
Query: 243 LSLSGTQIDDYAISYMSMMP------------------------SLKFIDISNTDIKG-F 277
L++S T + D ++ +S +P SL F+ + + G F
Sbjct: 191 LNVSKTNVTDTSLKVISEIPNLNTLILDGCNLTDVGLASLKDCQSLTFLSLDGIPLTGSF 250
Query: 278 IQQVGAETDLVLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
++++ L+L + L +L+ L+LE V DA++ ++ L L
Sbjct: 251 LKELKGIPLEYLTLANSKCDGTTFKDVGTLKNLKMLSLENCPVEDASIASIAAIASLETL 310
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
SL N +T+ ++ +L + L +LSI ++ L K +LKL+ H
Sbjct: 311 SLDNTKITEQAIVELKDMPSLVSLSINSTPISAEELRQLKATPNLKLVKAH 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
++++ L ++ + D +A+L L L L +TD L+ L + +L+ LDL +++S
Sbjct: 92 VDQITLDQSPIGDDDLAVLKQTPQLVGLSLRATKITDAGLKYLSSVPRLQKLDLSRTKIS 151
Query: 89 NRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTI-DSILEGNENKAP 142
+ G L+ L L +A T VT KL + +L LN+S + D+ L+
Sbjct: 152 DAGLEHLQTLVNLCELTIAETSVTDAGTAKLAGLKNLRVLNVSKTNVTDTSLKVISEIPN 211
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA--LEHLDLSSSMI 200
L + L G + A L + L+FL + L+ FL ++K LE+L L++S
Sbjct: 212 LNTLILDGCNLTDVGLASLK-DCQSLTFLSLDGIPLTG-SFLKELKGIPLEYLTLANSKC 269
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
+ + V + NL+ L+L N A + +LE LSL T+I + AI +
Sbjct: 270 DGTTFKDVGTL-KNLKMLSLENCPVEDA-SIASIAAIASLETLSLDNTKITEQAIVELKD 327
Query: 261 MPSLKFIDISNTDI 274
MPSL + I++T I
Sbjct: 328 MPSLVSLSINSTPI 341
>gi|329905907|ref|ZP_08274287.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547418|gb|EGF32242.1| hypothetical protein IMCC9480_2692 [Oxalobacteraceae bacterium
IMCC9480]
Length = 552
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 185/370 (50%), Gaps = 44/370 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L L+LS K+TDAG+ L ++ L++L L TG+ G+A L ++ +L+ L++
Sbjct: 38 LTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNMASLTQLNVRQCT 97
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN--IS 118
+TD L L L +L L+L G +++ G A LK P L++L+L +G + + N I+
Sbjct: 98 NITDAGLEQLANLPRLARLNLAGCHRITAAGIAHLKKLP-LTYLDL--SGCSGISNAAIA 154
Query: 119 SLEC-----LNLSNCTIDSILEGNENKA-----PLAKISLAGTT-FINEREAFLYIET-S 166
L+ LNLS+CT G+E A PL + L+G T F N FL T +
Sbjct: 155 HLKAHQLTELNLSDCTG----FGDEGFAHLAEVPLQTLDLSGCTGFTNSGLRFLNKSTLT 210
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRF 225
LS + + L ++L HLDL+ G D+ + A L +L+L+ NT
Sbjct: 211 RLSLRNCTQLDFGATFRLYGAQSLRHLDLAGCE-GLDNTALTALQDLPLEHLDLARNTFL 269
Query: 226 SSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN---TDIKGFIQ-- 279
+ G+ LA + +L L+LS G + D A+++++ +P+L+ + ++N T G Q
Sbjct: 270 NDTGLESLA-EMTSLRYLNLSGGADMTDAALAHLAELPALQHLILNNCRRTTDAGLAQLS 328
Query: 280 QVGAET----DLV-LSLTALQNL----NHLERLNLEQ-TQVSDATLFPLSTFKELIHLSL 329
+ ET D V L+ TAL L L++L+L T +SDA L L+ L L L
Sbjct: 329 HLPLETLELVDCVALTNTALARLPGAAATLQKLDLSGCTALSDAGLAHLADITTLRKLDL 388
Query: 330 R-NASLTDVS 338
N + TD
Sbjct: 389 SWNRNFTDAG 398
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 47/271 (17%)
Query: 168 LSFLDVSNSSL---SRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSN- 222
L+ L++SN+S + L + AL+ LDL + IGD + + + A+L LN+
Sbjct: 38 LTNLNLSNNSKLTDAGLASLAPLTALKQLDLGHCTGIGDTGLAHLGNM-ASLTQLNVRQC 96
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD--IKGFIQ 279
T + AG+ LA +LP L L+L+G +I I+++ +P L ++D+S I
Sbjct: 97 TNITDAGLEQLA-NLPRLARLNLAGCHRITAAGIAHLKKLP-LTYLDLSGCSGISNAAIA 154
Query: 280 QVGAE--TDLVLS-LTAL--QNLNHLERLNLEQTQVSDATLFPLSTFK-----ELIHLSL 329
+ A T+L LS T + HL + L+ +S T F S + L LSL
Sbjct: 155 HLKAHQLTELNLSDCTGFGDEGFAHLAEVPLQTLDLSGCTGFTNSGLRFLNKSTLTRLSL 214
Query: 330 RNASLTDV----------SLHQL----------SSLSKLTNLSI------RDAVLTNSGL 363
RN + D SL L ++L+ L +L + R+ L ++GL
Sbjct: 215 RNCTQLDFGATFRLYGAQSLRHLDLAGCEGLDNTALTALQDLPLEHLDLARNTFLNDTGL 274
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
S SL+ L+L GG +T+ A+ ++
Sbjct: 275 ESLAEMTSLRYLNLSGGADMTDAALAHLAEL 305
>gi|46445833|ref|YP_007198.1| F-box protein [Candidatus Protochlamydia amoebophila UWE25]
gi|46399474|emb|CAF22923.1| putative F-box protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 337
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 28/217 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C K+T AG+ HL + LE L LS+ G LT G+A L+ L L L +
Sbjct: 53 LTALQHLNLSVCGKLTGAGLAHLTPLVALENLDLSQCGKLTDAGLAHLTPLVALQHLGMR 112
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT------GV 111
G +TD+ L L+ L L++LDL G S +++ G A L+ L LNL G+
Sbjct: 113 GCRKLTDVGLAHLRPLVALQHLDLDGCSNLTDAGLAHLRPLVALQHLNLKRCDNLTDIGL 172
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSL--- 167
L + +L+ L+L C N A LA ++ L +N R F + + L
Sbjct: 173 AHLRPLVALQHLDLDGCN-------NLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHL 225
Query: 168 --------LSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
L+ D SN + + L + AL+HL+LS
Sbjct: 226 TPLVALQYLNLSDCSNLTDAGLAHLKSLVALQHLNLS 262
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 66/317 (20%)
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLN 124
++ L L++L+L ++++ G A LK L LNL+W TG+ L +++L+ LN
Sbjct: 1 MRPLVALQHLELGCCKLTDAGLAHLKSLVALQHLNLSWCDNLTDTGLAHLTPLTALQHLN 60
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
LS C K++ AG + A ++ S L +++ L+ L
Sbjct: 61 LSVC---------------GKLTGAGLAHLTPLVALENLDLSQCGKL--TDAGLAH---L 100
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
T + AL+HL M C L ++ L++ R A L+ L
Sbjct: 101 TPLVALQHLG------------MRGC--RKLTDVGLAHLRPLVA-----------LQHLD 135
Query: 245 LSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L G + + D ++++ + +L+ +++ D + +G L L+ L L+ L
Sbjct: 136 LDGCSNLTDAGLAHLRPLVALQHLNLKRCD---NLTDIG--------LAHLRPLVALQHL 184
Query: 304 NLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTN 360
+L+ ++DA L L+ L HL+LR TD L L+ L L L++ D LT+
Sbjct: 185 DLDGCNNLTDAGLAHLTPLVALQHLNLRGCFKFTDAGLAHLTPLVALQYLNLSDCSNLTD 244
Query: 361 SGLGSFKPPRSLKLLDL 377
+GL K +L+ L+L
Sbjct: 245 AGLAHLKSLVALQHLNL 261
>gi|46447554|ref|YP_008919.1| hypothetical protein pc1920 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401195|emb|CAF24644.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 517
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL ++ L+ L LS+ LT G+ LS L L LDL
Sbjct: 299 LTALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLSPLIALQHLDLS 358
Query: 60 GLPVTDLV-LRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+ L L+ LT L+YLDL +++ G A LK RL +LNL + G+
Sbjct: 359 YCWRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNLRYCENLTDAGL 418
Query: 112 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
L + +L+ LNLS C D+ L L + L+ + + ++L
Sbjct: 419 AHLTPLMALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDAGLAHLTSLTVLQ 478
Query: 170 FLDVS------NSSLSRFCFLTQMKALEHLDLS 196
+LD+S ++ L+R LT + L+HLDLS
Sbjct: 479 YLDLSYCKNLTDAGLAR---LTPLTGLQHLDLS 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 34/279 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
LK L L C +TD G+ HL ++ L+ L LS+ LT G+A L+ L L LDL G
Sbjct: 252 LKVLHLEACQAITDDGLAHLTPLTALQHLDLSQCRKLTGIGLAHLTPLTALQHLDLSGCD 311
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLA------WTGVTKL 114
+TD L L LT L++L+L + +++ G L L L+L+ + G+ L
Sbjct: 312 NLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLSPLIALQHLDLSYCWRLNYAGLAHL 371
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+++L+ L+LS+C I+ G + PL ++ ++N R Y E +++
Sbjct: 372 KPLTALQYLDLSHC-INLTDAGLAHLKPLMRLQ-----YLNLR----YCE-------NLT 414
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGI 232
++ L+ LT + AL+HL+LS + D + + + A L++L+LS+ R + AG+
Sbjct: 415 DAGLAH---LTPLMALQHLNLSECYHLTDAGLTHLTPLTA-LQHLDLSHCRSLTDAGLAH 470
Query: 233 LAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 270
L L L+ L LS + + D ++ ++ + L+ +D+S
Sbjct: 471 LTS-LTVLQYLDLSYCKNLTDAGLARLTPLTGLQHLDLS 508
>gi|300691489|ref|YP_003752484.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078549|emb|CBJ51205.2| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum PSI07]
Length = 533
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 150/376 (39%), Gaps = 57/376 (15%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L ELDLSRC +T AG+ HL + L +L + + + +G LL++ L+ LD+
Sbjct: 141 LTELDLSRCRGPITAAGIAHLSHLP-LVRLNVRDQRIGVEGARLLANHPTLTSLDVSNGR 199
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ R+L T+L L + +++ GA L L+ L+++ G+
Sbjct: 200 IGPEGARALADNTRLTTLSVSHNRIGAEGAKALAASETLTSLDISENGI----------- 248
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
G+E LA + T +N + +E +
Sbjct: 249 -------------GDEGACALATNTKLTTLNVNRNR--IGVEGA---------------K 278
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L +AL LD+ + IGD+ V +A A L LN+ TR + GVG LA L
Sbjct: 279 ALAAGEALTSLDIGGNDIGDEGVRALAA-NARLTTLNVERTRVGADGVGALAAS-KTLTS 336
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L + I D ++ SL + I + I GA+ AL L
Sbjct: 337 LRIDSNNIGDAGARALATNTSLTTLHIESNGI----SPAGAQ--------ALAANTTLTT 384
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNL + DA S LI LS+R L+D L++ +T L D + ++G
Sbjct: 385 LNLGYNGIGDAGAQAWSANTTLISLSVRRNGLSDAGATILAASKTMTTLDAGDNTIRDAG 444
Query: 363 LGSFKPPRSLKLLDLH 378
+ R+L LD+
Sbjct: 445 ARALAANRTLTTLDVR 460
>gi|290999671|ref|XP_002682403.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284096030|gb|EFC49659.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 141/361 (39%), Gaps = 89/361 (24%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
+ G+K++ + L KL + + + +G+ +S L+ L+ L + +++ + L+ L +
Sbjct: 122 EEGVKYISELKQLTKLTIYGSHIGDEGVRYISELKQLTYLSIPSNGISEYGAKHLRELKQ 181
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTID 131
L L ++ ++V N G+ + +L+ L ++ G L ++ L CL++S+ +
Sbjct: 182 LTTLIIFCNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWL- 240
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
G+E ++K+ T IN + N F++ + L+
Sbjct: 241 ----GDEGAKYVSKMKQLTTLHINSNR--------------IGNEGSK---FISSLNQLK 279
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
+LD+ + IGD+ +E G L L+ L LS +I
Sbjct: 280 NLDICKNDIGDEGLEYF--------------------------GQLAQLKSLDLSYNRIG 313
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D Y+S + L ++DI NHL
Sbjct: 314 DEGAQYLSELKQLIYLDIKT--------------------------NHL----------G 337
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
D P+ K+LI+L + N + + +S L +LT L IR+ +T G F +
Sbjct: 338 DKGAMPIGELKKLIYLYINNNKIRNEGAKYISELKQLTKLDIRNNFITEEGTKYFTEMKQ 397
Query: 372 L 372
L
Sbjct: 398 L 398
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 146/331 (44%), Gaps = 41/331 (12%)
Query: 50 LQNLSVLDLGGLP------------VTDLVLRS--------LQVLTKLEYLDLWGSQVSN 89
LQN++ L +G + +T L++R + L +L L ++GS + +
Sbjct: 87 LQNIATLKVGVITRDTYRKLILMKSLTKLIIRCDDEEGVKYISELKQLTKLTIYGSHIGD 146
Query: 90 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLA 149
G + +L++L++ G+++ E L+ I GNE ++++
Sbjct: 147 EGVRYISELKQLTYLSIPSNGISEYGAKHLRELKQLTTLIIFCNRVGNEGSKYISELKQL 206
Query: 150 GTTFINER----EAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGD 202
T I+E E Y+ E + L+ LD+S++ L ++++MK L L ++S+ IG+
Sbjct: 207 TTLSIDENDIGAEGAKYLSELTQLTCLDISSNWLGDEGAKYVSKMKQLTTLHINSNRIGN 266
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
+ + ++ + L+NL++ G+ G L L+ L LS +I D Y+S +
Sbjct: 267 EGSKFISSLNQ-LKNLDICKNDIGDEGLEYF-GQLAQLKSLDLSYNRIGDEGAQYLSELK 324
Query: 263 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 322
L ++DI + GA + L L L + ++ + +S K
Sbjct: 325 QLIYLDIKTN----HLGDKGA--------MPIGELKKLIYLYINNNKIRNEGAKYISELK 372
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+L L +RN +T+ + + +L +L+I
Sbjct: 373 QLTKLDIRNNFITEEGTKYFTEMKQLIDLTI 403
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C +V + G K++ + L L + E + A+G LS L L+ LD+ + D + +
Sbjct: 189 CNRVGNEGSKYISELKQLTTLSIDENDIGAEGAKYLSELTQLTCLDISSNWLGDEGAKYV 248
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
+ +L L + +++ N G+ + +L L++ G+ ++ L+ L+LS
Sbjct: 249 SKMKQLTTLHINSNRIGNEGSKFISSLNQLKNLDICKNDIGDEGLEYFGQLAQLKSLDLS 308
Query: 127 NCTIDSILEGNENKAPLAKISL--AGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FC 182
I EG + + L ++ T + ++ A E L +L ++N+ +
Sbjct: 309 YNRIGD--EGAQYLSELKQLIYLDIKTNHLGDKGAMPIGELKKLIYLYINNNKIRNEGAK 366
Query: 183 FLTQMKALEHLDLSSSMIGDDSVE 206
+++++K L LD+ ++ I ++ +
Sbjct: 367 YISELKQLTKLDIRNNFITEEGTK 390
>gi|290993170|ref|XP_002679206.1| leucine rich repeat protein [Naegleria gruberi]
gi|284092822|gb|EFC46462.1| leucine rich repeat protein [Naegleria gruberi]
Length = 527
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 137/296 (46%), Gaps = 25/296 (8%)
Query: 41 ADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 100
++G +S L+ L+ L + + D + L L +L YLD+ + + N G + +
Sbjct: 216 SEGCKCISELKQLTSLCIDDNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQ 275
Query: 101 LSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF-- 153
L LN++ G+ +S L L LSN I + EG + + L +++ +
Sbjct: 276 LEKLNISQNYIGDEGLEYFGKLSQLTSLELSNNKIGT--EGAKYLSELKQLTQLDIEYNK 333
Query: 154 INEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
I ++ A + E L L ++N+ + ++ ++K L +LD+S + IG++ ++ + +
Sbjct: 334 IGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDISENRIGNEGIKYIGEL 393
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
L ++N+S R + G + G L L L LS I + Y+S + L ++ ++N
Sbjct: 394 -KQLTDVNISENRIGNEGAKYI-GQLSQLTSLYLSNNNIGNEGAKYISELKELIYLYMNN 451
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
I+ GA+ + + + +L++ + + + +S K+LIHL
Sbjct: 452 NKIR----NEGAK--------YISEMKQVTQLDIGNNYIGEEGIKYISEMKQLIHL 495
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 3 CLKELD--LSRCV---KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 57
C+ EL S C+ + D G K+L ++ L L +S GL +G +S+L L L+
Sbjct: 221 CISELKQLTSLCIDDNHINDEGAKYLSELAQLTYLDISSNGLGNEGTKYISTLNQLEKLN 280
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
+ + D L L++L L+L +++ GA L +L+ L++ + + +
Sbjct: 281 ISQNYIGDEGLEYFGKLSQLTSLELSNNKIGTEGAKYLSELKQLTQLDIEYNKIGDKGAM 340
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
E L N I++ GN+ G +I E + +Y LD+S +
Sbjct: 341 YFGELKQLVNLIINNNRIGND-----------GVKYIGELKQLIY--------LDISENR 381
Query: 178 LSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ ++ ++K L +++S + IG++ + + + + L +L LSN + G ++
Sbjct: 382 IGNEGIKYIGELKQLTDVNISENRIGNEGAKYIGQL-SQLTSLYLSNNNIGNEGAKYIS- 439
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L ++ +I + Y+S M + +DI N +I + G + ++ ++
Sbjct: 440 ELKELIYLYMNNNKIRNEGAKYISEMKQVTQLDIGNN----YIGEEG-----IKYISEMK 490
Query: 296 NLNHLER 302
L HLE+
Sbjct: 491 QLIHLEK 497
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 178/428 (41%), Gaps = 61/428 (14%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIA-LLSSLQNLSVLDLGGLPVTDLVLRSL 71
V T+ K L+S+ +L +L + +G A +S L+ L+ L + + D +R +
Sbjct: 85 VCATNDTCKKLISMKSLTELIIK---CDDEGSAKFISELKQLTRLTIDASHIRDEGVRYI 141
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS 126
L +L YL + + +S+ G L+ +L+ L + G + + L L +
Sbjct: 142 SELKQLAYLSVHSNDISDDGVKYLRELKQLTTLIIFSNRVGSEGCKCISELKQLTSLCID 201
Query: 127 NCTIDSILEGNENK---------APLAKIS--LAGTTFINEREAFLYIETSLLSFLDVSN 175
+ I+ EG N+ + L +++ IN+ A E + L++LD+S+
Sbjct: 202 DNHIND--EGANNRVGSEGCKCISELKQLTSLCIDDNHINDEGAKYLSELAQLTYLDISS 259
Query: 176 SSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ L +++ + LE L++S + IGD+ +E + + L +L LSN + + G L
Sbjct: 260 NGLGNEGTKYISTLNQLEKLNISQNYIGDEGLEYFGKL-SQLTSLELSNNKIGTEGAKYL 318
Query: 234 A-----------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
+ G L L L ++ +I + + Y+ + L ++DIS
Sbjct: 319 SELKQLTQLDIEYNKIGDKGAMYFGELKQLVNLIINNNRIGNDGVKYIGELKQLIYLDIS 378
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
++G E + + L L +N+ + ++ + + +L L L
Sbjct: 379 EN-------RIGNE-----GIKYIGELKQLTDVNISENRIGNEGAKYIGQLSQLTSLYLS 426
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 390
N ++ + +S L +L L + + + N G + + LD+ G + E+ I
Sbjct: 427 NNNIGNEGAKYISELKELIYLYMNNNKIRNEGAKYISEMKQVTQLDI-GNNYIGEEGIKY 485
Query: 391 FCKMHPRI 398
+M I
Sbjct: 486 ISEMKQLI 493
>gi|149174591|ref|ZP_01853217.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
gi|148846701|gb|EDL61038.1| hypothetical protein PM8797T_09969 [Planctomyces maris DSM 8797]
Length = 346
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ Q+K+L+ LD SSS+I D + + NL L L T AG+ L L L++L
Sbjct: 110 IAQLKSLKILDFSSSLITDSDMSYFQGL-YNLEALILERTSIGDAGLYHLRD-LRKLKVL 167
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L T + D +SY+ + L ++++S T I L L+ + +L+ L
Sbjct: 168 RLWETDVTDVGLSYLKDLTELTYLNLSETKISD------------AGLIHLKGMLNLQTL 215
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L+ TQVSD L L +L L L +A +TD L LS L L++ D +++ GL
Sbjct: 216 YLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLADTQISDQGL 275
Query: 364 GSFKPPRSLKLLDL 377
+ L LD+
Sbjct: 276 VYLGKLKELHELDI 289
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
L LNLS T+ S AG+ L G L NL+ L L TQ+ D + Y+ +P L+ +D+ + +
Sbjct: 187 ELTYLNLSETKISDAGLIHLKGML-NLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAE 245
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ TD L L +L++L L TQ+SD L L KEL L +R +
Sbjct: 246 V----------TDA--GLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTN 293
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSG---LGSFKPPRS 371
+D L L L L L+ +T++G L F P S
Sbjct: 294 TSDAGLVHLQGLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 195 LSSSMIGDDSVEMVACVGA-----NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
+SS GDD A + A +L+ L+ S++ + + + G L NLE L L T
Sbjct: 91 ISSVGYGDDYEFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQG-LYNLEALILERTS 149
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
I D + ++ + LK + + TD+ TD+ LS L++L L LNL +T+
Sbjct: 150 IGDAGLYHLRDLRKLKVLRLWETDV----------TDVGLSY--LKDLTELTYLNLSETK 197
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+SDA L L L L L ++D L L L KL L + DA +T++GL
Sbjct: 198 ISDAGLIHLKGMLNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSEC 257
Query: 370 RSLKLLDL 377
R+LK L L
Sbjct: 258 RNLKKLTL 265
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAG+ HL + L+ L L ET +T G++ L L L+ L+L ++D L L+ +
Sbjct: 150 IGDAGLYHLRDLRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGLIHLKGM 209
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L+ L L +QVS+RG LK P+L L+L VT + EC NL T+
Sbjct: 210 LNLQTLYLDATQVSDRGLIYLKELPKLETLDLLDAEVTDAGLVHLSECRNLKKLTLAD-- 267
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV--SNSSLSRFCFLTQMKALEH 192
+IS G ++ + + L LD+ +N+S + L +K+L +
Sbjct: 268 ---------TQISDQGLVYLGKLKE--------LHELDIRYTNTSDAGLVHLQGLKSLAY 310
Query: 193 LDLSSSMIGD 202
L+ S+ I D
Sbjct: 311 LNWESTKITD 320
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+ T+A + + + +L+ L S + +T ++ L NL L L + D L L+
Sbjct: 101 EFTEADLAAIAQLKSLKILDFSSSLITDSDMSYFQGLYNLEALILERTSIGDAGLYHLRD 160
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
L KL+ L LW + V++ G + LK L++LNL+ T ++ I LNL
Sbjct: 161 LRKLKVLRLWETDVTDVGLSYLKDLTELTYLNLSETKISDAGLIHLKGMLNLQTL----- 215
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
+LD + S +L ++ LE L
Sbjct: 216 ------------------------------------YLDATQVSDRGLIYLKELPKLETL 239
Query: 194 DLSSSMIGDDS-VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
DL + + D V + C NL+ L L++T+ S G+ + G L L L + T D
Sbjct: 240 DLLDAEVTDAGLVHLSEC--RNLKKLTLADTQISDQGL-VYLGKLKELHELDIRYTNTSD 296
Query: 253 YAISYMSMMPSLKFIDISNTDI 274
+ ++ + SL +++ +T I
Sbjct: 297 AGLVHLQGLKSLAYLNWESTKI 318
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
+VTDAG+ HL L+KL L++T ++ G+ L L+ L LD+ +D L LQ
Sbjct: 244 AEVTDAGLVHLSECRNLKKLTLADTQISDQGLVYLGKLKELHELDIRYTNTSDAGLVHLQ 303
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMF-PRLS 102
L L YL+ +++++ G L F P+LS
Sbjct: 304 GLKSLAYLNWESTKITDAGYTRLHEFLPKLS 334
>gi|149176763|ref|ZP_01855374.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148844404|gb|EDL58756.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 416
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 152 TFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVA 209
T I ++ A Y++ L L ++ S++ L +M +L L L I D ++
Sbjct: 127 TIITDQGA-TYLKQQKLGHLGITGGSMTDNGLNELAEMNSLRTLGLHHLAITGD--QLPP 183
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKFI 267
L+ L+LS+TRF++ G+ L+ PN L L LS T + + +S P+L+ +
Sbjct: 184 NTFPKLKMLDLSDTRFTNQGLKNLS---PNASLVYLHLSNTNVSSAGLQELSKFPNLRAL 240
Query: 268 DISNTDIKGF----------IQQVGAETDLVLSLTALQ--NLNHLERLNLEQTQVSDATL 315
+ N IK + Q+ + V ALQ L+ + +L L+Q+Q++D L
Sbjct: 241 RLGNLKIKAAAFAKLANMKRLYQLDLQGTAVNDAVALQLSQLDQITQLRLDQSQITDQGL 300
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
L+T K L L L A +TD L LS L KL L + D +++ GL +L++L
Sbjct: 301 RHLATMKNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRML 360
Query: 376 DL 377
+L
Sbjct: 361 NL 362
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TD G +L L L ++ +T +G+ L+ + +L L L L +T L
Sbjct: 129 ITDQGATYLKQ-QKLGHLGITGGSMTDNGLNELAEMNSLRTLGLHHLAITGDQLPP-NTF 186
Query: 75 TKLEYLDLWGSQVSNRGAAVLK-----MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCT 129
KL+ LDL ++ +N+G L ++ LS N++ G+ +L +L L L N
Sbjct: 187 PKLKMLDLSDTRFTNQGLKNLSPNASLVYLHLSNTNVSSAGLQELSKFPNLRALRLGNLK 246
Query: 130 IDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
I + N L ++ L GT +N+ A L+Q+
Sbjct: 247 IKAAAFAKLANMKRLYQLDLQGTA-VNDAVALQ----------------------LSQLD 283
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
+ L L S I D + +A + NL L L + + +G+ +L+ LP L+ L LS T
Sbjct: 284 QITQLRLDQSQITDQGLRHLATM-KNLETLFLPGAKITDSGLKVLS-QLPKLDYLDLSDT 341
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
QI D + +S +P+L+ +++SNT + +Q+
Sbjct: 342 QISDEGLRQLSKIPALRMLNLSNTRVTDQAKQI 374
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L +LDL + V DA L + + +L L ++ +T G+ L++++NL L L G
Sbjct: 258 MKRLYQLDL-QGTAVNDAVALQLSQLDQITQLRLDQSQITDQGLRHLATMKNLETLFLPG 316
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-------- 112
+TD L+ L L KL+YLDL +Q+S+ G L P L LNL+ T VT
Sbjct: 317 AKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLSNTRVTDQAKQILL 376
Query: 113 KLPNISSLECLN--LSNCTIDSI 133
+ P + S+E N +S TI+ I
Sbjct: 377 QFPALESIEAFNTSISPVTIEDI 399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSL 71
+K+ A L ++ L +L L T + D +AL LS L ++ L L +TD LR L
Sbjct: 245 LKIKAAAFAKLANMKRLYQLDLQGTAVN-DAVALQLSQLDQITQLRLDQSQITDQGLRHL 303
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
+ LE L L G+++++ G VL P+L +L+L+ T G+ +L I +L LNLS
Sbjct: 304 ATMKNLETLFLPGAKITDSGLKVLSQLPKLDYLDLSDTQISDEGLRQLSKIPALRMLNLS 363
Query: 127 NCTI 130
N +
Sbjct: 364 NTRV 367
>gi|32477504|ref|NP_870498.1| adenylate cyclase regulatory protein [Rhodopirellula baltica SH 1]
gi|32448058|emb|CAD77575.1| conserved hypothetical protein-putative adenylate cyclase
regulatory protein [Rhodopirellula baltica SH 1]
Length = 513
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 56/352 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L
Sbjct: 178 IDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGL 237
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+KL +DL + + + G L L + L + VT
Sbjct: 238 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTD--------------------- 276
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
EG APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 277 EGLVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLENLQ 316
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
S I D+S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 317 GDYSKINDESMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDG 374
Query: 255 ISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLE 301
+ +S +P++ +DIS + I Q+G T L +L +L +LE
Sbjct: 375 LKVISQLPAVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLE 434
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 435 ELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 486
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 42/309 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L+ +TD +K + +++L+ L+L TG+T +G+ LL+ L L +DL +
Sbjct: 192 LKRLTLADTA-ITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNI 250
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL-EC 122
D + SL + L + L S+V++ G L P L +N + P + L +
Sbjct: 251 GDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQT 309
Query: 123 LNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSFLDVSNS 176
L N D +E+ A L +S + G E + +L F ++ +S
Sbjct: 310 PTLENLQGDYSKINDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARF-ELRDS 368
Query: 177 SLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG---------------------- 212
S+ ++Q+ A+ H+D+S + S E +A +G
Sbjct: 369 SVDDDGLKVISQLPAVTHVDISECRLA--SPEGIAQLGKLTGLTYLGLWETKTNDETLAG 426
Query: 213 ----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 268
NL LNL +T + + +L + L+ L+++GTQ+ D + ++ +P+LK ++
Sbjct: 427 FGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMN 485
Query: 269 ISNTDIKGF 277
++NT I GF
Sbjct: 486 VANTSI-GF 493
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ + +D+S C + G+ L ++ L L L ET + +A L NL L+L
Sbjct: 381 LPAVTHVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKS 440
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
VTD L L +TKL+ L++ G+Q+ + L P L +N+A T +
Sbjct: 441 TAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 491
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 165 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 212
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 213 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 272
Query: 357 VLTNSGLGSFKP 368
+T+ GL P
Sbjct: 273 KVTDEGLVKLAP 284
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 186 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 245
Query: 354 RDAVLTNSGLGSFKPPRSL 372
R+ + ++G+ S ++L
Sbjct: 246 RNTNIGDAGMDSLAKIKTL 264
>gi|281210637|gb|EFA84803.1| hypothetical protein PPL_01796 [Polysphondylium pallidum PN500]
Length = 739
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 154/364 (42%), Gaps = 56/364 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+++ L C TD GM++ + L L L++ +T + L + L L L
Sbjct: 363 MYHLQKVSLVACFGFTDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLEELSLRN 422
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA-VLKMFPRLSFLNLAWTGV-------- 111
+TD L L L +L++LDL +++ G + F +L LNL+ T V
Sbjct: 423 TKITDSGLTLLSSLVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTEKAIQKL 482
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT------FINEREAFLYIET 165
TKLP +S L LSNC + GN++ L I+L G T F + ++
Sbjct: 483 TKLPLVS----LYLSNCP----MIGNQS---LFFITLFGKTLKLLDIFGTKIGGAGFVNL 531
Query: 166 SLLSFLDV----SNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN----L 215
L L V SLS L ++ + LDLS D + + N L
Sbjct: 532 QRLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLS------DYINITTIAPLNPLRYL 585
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
L+LSNT+ S + + G NL IL+L T++ D +S + + SL + + T I+
Sbjct: 586 CELSLSNTKISDDSIDSIIG-CSNLVILNLDRTRVRDIGVSKLISL-SLHTLSLMATGIR 643
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 335
G LT L L L LN+ + DA + PL L ++ LRN
Sbjct: 644 GD------------CLTTLSQLITLTSLNISSNDIQDAKVLPLLDLPNLTYIDLRNTQAF 691
Query: 336 DVSL 339
SL
Sbjct: 692 TASL 695
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 67/316 (21%)
Query: 38 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
G T G+ +++L+ L L VT++ ++SL+ + KLE L L +++++ G +L
Sbjct: 376 GFTDLGMENFKRMEHLTSLILTDCAVTNVSVKSLKQMVKLEELSLRNTKITDSGLTLLSS 435
Query: 98 FPRLSFLNLAWTGVT------KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGT 151
L FL+L+ +T +P + LE LNLS ++ K PL + L+
Sbjct: 436 LVELKFLDLSACNITDEGITFAIPCFTKLETLNLSATSVTEKAIQKLTKLPLVSLYLS-- 493
Query: 152 TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
+ MIG+ S+ +
Sbjct: 494 --------------------------------------------NCPMIGNQSLFFITLF 509
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 270
G L+ L++ T+ AG L LPNL +L L G + D IS+++ + +++ +D+S
Sbjct: 510 GKTLKLLDIFGTKIGGAGFVNLQ-RLPNLTVLKLPGRDSLSDAHISHLNALQNVRRLDLS 568
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
+ +I + ++ L L +L L+L T++SD ++ + L+ L+L
Sbjct: 569 D-----YIN--------ITTIAPLNPLRYLCELSLSNTKISDDSIDSIIGCSNLVILNLD 615
Query: 331 NASLTDVSLHQLSSLS 346
+ D+ + +L SLS
Sbjct: 616 RTRVRDIGVSKLISLS 631
>gi|421611905|ref|ZP_16053033.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
gi|408497310|gb|EKK01841.1| hypothetical protein RBSH_02839 [Rhodopirellula baltica SH28]
Length = 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 149/354 (42%), Gaps = 60/354 (16%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 120 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 179
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDS 132
+KL +DL S + + G L L+ + L + VT L ++SL
Sbjct: 180 SKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKSKVTDEGLVKLTSL------------ 227
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
PL I+ T IN L Q LE+
Sbjct: 228 ---------PLKSINFNYCTTING----------------------PTMKMLGQTPTLEN 256
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L S I D+S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 257 LQGDYSKINDESMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDD 314
Query: 253 YAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNH 299
+ +S +P++ ++DIS + I Q+G T L +L+ +L +
Sbjct: 315 DGLKVISQLPAVTYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDLIN 374
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LE LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 375 LEELNLKSTSVTDESLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 428
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 39/297 (13%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TD +K + +++ L+L TG+T +G+ LL+ L L +DL + D + SL +
Sbjct: 144 ITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKI 203
Query: 75 TKLEYLDLWGSQVSNRG---------------------AAVLKMF---PRLSFLNLAWTG 110
L + L S+V++ G +KM P L L ++
Sbjct: 204 KTLADVQLEKSKVTDEGLVKLTSLPLKSINFNYCTTINGPTMKMLGQTPTLENLQGDYSK 263
Query: 111 V-----TKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
+ +L +S L+ L + C + + I NKA LA+ L ++ +++ +
Sbjct: 264 INDESMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDSS-VDDDGLKVIS 321
Query: 164 ETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
+ ++++D+S L+ L ++ L +L L + D+++ + NL LNL
Sbjct: 322 QLPAVTYVDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDL-INLEELNL 380
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
+T + + +L + L+ L+++GTQ+ D + ++ +P+LK ++++NT I GF
Sbjct: 381 KSTSVTDESLPVLM-KMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI-GF 435
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 107 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 154
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L+ ++ L L +T V+D L L+ +L + LRN+++ D + L+ + L ++ + +
Sbjct: 155 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNSNIGDAGMDSLAKIKTLADVQLEKS 214
Query: 357 VLTNSGL 363
+T+ GL
Sbjct: 215 KVTDEGL 221
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
+D+S C + G+ L ++ L L L ET + ++ L NL L+L VTD
Sbjct: 329 VDISECRLASPEGIAQLGELTGLTYLGLWETKTNDETLSGFGDLINLEELNLKSTSVTDE 388
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
L L + KL+ L++ G+Q+ + L P L +N+A T +
Sbjct: 389 SLPVLMKMIKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI 433
>gi|302818476|ref|XP_002990911.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
gi|300141242|gb|EFJ07955.1| hypothetical protein SELMODRAFT_132548 [Selaginella moellendorffii]
Length = 196
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 9 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+ RC K+T+ G++H+L++ L+ L LSETG+ GI L+ L+NLS LDLGGLPVTD +
Sbjct: 122 IDRCSKITNQGLEHILTLGKLKHLGLSETGIGEQGIGKLAVLRNLSHLDLGGLPVTDSHV 181
Query: 69 RSLQV 73
SL V
Sbjct: 182 SSLLV 186
>gi|59802561|gb|AAX07517.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 402
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 142/321 (44%), Gaps = 55/321 (17%)
Query: 43 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 102
G+ + SL L+VLDLG VTD L+ L+ LT L +V++ G L L+
Sbjct: 134 GLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEVTDAGLKELSGLANLT 193
Query: 103 FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 162
LNL +T VT L E L+N T + L GT+
Sbjct: 194 ELNLRFTKVTYL---GLKELKGLTNLT---------------SLDLFGTS---------- 225
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
+++SL+ LT L L+LS + + D ++ + + ANL +L+L
Sbjct: 226 ----------TTDASLAELKGLTN---LTELNLSDTKVTDAGLQELTGL-ANLASLDLRF 271
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
T+ + AG+ L G L NL +L L GT + D + + + L +D+ +T + G
Sbjct: 272 TKVTDAGLQKLKG-LSNLAVLDLFGTSVTDAGLKELGRLSKLTVLDLGSTKVTGT----- 325
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
L L L +L L+L T V+DA L LS L L L ++D L +L
Sbjct: 326 -------GLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFGTPVSDTDLKEL 378
Query: 343 SSLSKLTNLSIRDAVLTNSGL 363
LSKLT+L + +T+ G+
Sbjct: 379 KKLSKLTSLRLGRTAVTDVGI 399
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 34/259 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG 59
++ L LDL R KVTDAG++ L ++ L W+S D G+ LS L NL+ L+L
Sbjct: 141 LSKLTVLDLGRT-KVTDAGLQELRGLTNLTT-WISAPHEVTDAGLKELSGLANLTELNLR 198
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 114
VT L L+ L+ LT L LDL+G+ ++ A LK L+ LNL+ T VT +L
Sbjct: 199 FTKVTYLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDAGLQEL 258
Query: 115 PNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
+++L L+L + D+ L+ + + LA + L GT S D
Sbjct: 259 TGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGT-----------------SVTDA 301
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
L R LT LDL S+ + ++ + + ANL +L+L T + AG+ L
Sbjct: 302 GLKELGRLSKLTV------LDLGSTKVTGTGLKELTGL-ANLTSLHLRLTAVTDAGLKEL 354
Query: 234 AGHLPNLEILSLSGTQIDD 252
+G L NL L L GT + D
Sbjct: 355 SG-LANLTSLDLFGTPVSD 372
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
ANL LNL T+ + G+ L G L NL L L GT D +++ + + +L +++S+T
Sbjct: 190 ANLTELNLRFTKVTYLGLKELKG-LTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDT 248
Query: 273 DI--KGFIQQVG----AETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 320
+ G + G A DL + L L+ L++L L+L T V+DA L L
Sbjct: 249 KVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFGTSVTDAGLKELGR 308
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+L L L + +T L +L+ L+ LT+L +R +T++GL +L LDL G
Sbjct: 309 LSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELSGLANLTSLDLFG 367
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L+L T+ + AG+ L G L NL + ++ D + +S + +L +++ T +
Sbjct: 147 LDLGRTKVTDAGLQELRG-LTNLTTWISAPHEVTDAGLKELSGLANLTELNLRFTKVT-- 203
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
L L L+ L +L L+L T +DA+L L L L+L + +TD
Sbjct: 204 ----------YLGLKELKGLTNLTSLDLFGTSTTDASLAELKGLTNLTELNLSDTKVTDA 253
Query: 338 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L +L+ L+ L +L +R +T++GL K +L +LDL G
Sbjct: 254 GLQELTGLANLASLDLRFTKVTDAGLQKLKGLSNLAVLDLFG 295
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L F V++ L L+++ L DL + + D ++ + + NL + +
Sbjct: 125 LRFTKVTDLGLKEMRSLSKLTVL---DLGRTKVTDAGLQELRGL-TNLTTWISAPHEVTD 180
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
AG+ L+G L NL L+L T++ + + + +L +D+ T + TD
Sbjct: 181 AGLKELSG-LANLTELNLRFTKVTYLGLKELKGLTNLTSLDLFGT----------STTDA 229
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
SL L+ L +L LNL T+V+DA L L+ L L LR +TD L +L LS
Sbjct: 230 --SLAELKGLTNLTELNLSDTKVTDAGLQELTGLANLASLDLRFTKVTDAGLQKLKGLSN 287
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L L + +T++GL L +LDL
Sbjct: 288 LAVLDLFGTSVTDAGLKELGRLSKLTVLDL 317
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG+K L +S L L L T +T G+ L+ L NL+ L L VTD L+ L L
Sbjct: 298 VTDAGLKELGRLSKLTVLDLGSTKVTGTGLKELTGLANLTSLHLRLTAVTDAGLKELSGL 357
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L LDL+G+ VS+ LK +L+ L L T VT
Sbjct: 358 ANLTSLDLFGTPVSDTDLKELKKLSKLTSLRLGRTAVT 395
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
L L +++L+ L L+L +T+V+DA L L L +TD L +LS L+ L
Sbjct: 133 LGLKEMRSLSKLTVLDLGRTKVTDAGLQELRGLTNLTTWISAPHEVTDAGLKELSGLANL 192
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
T L++R +T GL K +L LDL G
Sbjct: 193 TELNLRFTKVTYLGLKELKGLTNLTSLDLFG 223
>gi|255017603|ref|ZP_05289729.1| hypothetical protein LmonF_07220 [Listeria monocytogenes FSL
F2-515]
Length = 419
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 87 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 142
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 143 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 198
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 199 EFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 256
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++A +G NL +L N F+ G LPNLE L +S
Sbjct: 257 IHDLPSLETFNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 316
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 317 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 368
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 369 YIDD-ISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 404
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 56 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 113
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 114 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 168
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 169 -LTNFPSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 222
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 223 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IG 277
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 278 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 337
Query: 379 GGWL 382
+L
Sbjct: 338 NNYL 341
>gi|290979019|ref|XP_002672232.1| predicted protein [Naegleria gruberi]
gi|284085807|gb|EFC39488.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L ++ + G KH+ + L L + +T DG +S ++ L+VL++ G
Sbjct: 104 MKQLKQLHIANN-NIGPEGAKHISGLEQLTILNIRANEITVDGAKFISEMKQLTVLNIIG 162
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ D + + + +L LD+ + + GA + ++ LN+ + + +
Sbjct: 163 NDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSIN-----DCV 217
Query: 121 ECLN----LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
EC L++ ++S + I L G FI +F + L+ L ++++
Sbjct: 218 ECFGKMKQLTDLNVNS-----------SCIGLCGIVFI---SSF-----NQLTHLSIASN 258
Query: 177 SLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
S+S + ++QMK + LD+S + IGD+ V+ ++
Sbjct: 259 SISNYEASHISQMKNVIKLDISDNRIGDNGVQSIS------------------------- 293
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
+ L L++S I I Y+ M +L ++ I++ +I V +
Sbjct: 294 -EMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIG------------VKGANQI 340
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+ HL +L++ V D +S ++L L++ + + D + LS + +LT L+
Sbjct: 341 SEMKHLAQLSIYNNAVGDEGAKFISEMEQLTFLNIGSNEIGDEGVKALSGMKQLTELNTV 400
Query: 355 DAVLTNSG 362
D ++ G
Sbjct: 401 DNNISEEG 408
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 164/403 (40%), Gaps = 84/403 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L+L + +G K++ S+ L L+++
Sbjct: 31 MKELKKLNLENNSNIHPSGFKYICSLEQLTDLYMTFCYFR-------------------- 70
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNIS 118
LP+ + L L L YL + G+ + GA + +L L++A G +IS
Sbjct: 71 LPIA----KHLPSLKSLTYLLITGNYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKHIS 126
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL--DVSNS 176
LE L + N + NE I++ G FI+E + + ++L+ + D+ +
Sbjct: 127 GLEQLTILN------IRANE-------ITVDGAKFISEMK-----QLTVLNIIGNDICDE 168
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA--------------------CVGA--N 214
F++ MK L +LD+S + IG++ + V+ C G
Sbjct: 169 GAK---FISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSINDCVECFGKMKQ 225
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L +LN++++ G+ + L LS++ I +Y S++S M ++ +DIS+
Sbjct: 226 LTDLNVNSSCIGLCGI-VFISSFNQLTHLSIASNSISNYEASHISQMKNVIKLDISDN-- 282
Query: 275 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++G + ++ +N L LN+ ++ + + L +L + + ++
Sbjct: 283 -----RIGDN-----GVQSISEMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNI 332
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+Q+S + L LSI + + + G L L++
Sbjct: 333 GVKGANQISEMKHLAQLSIYNNAVGDEGAKFISEMEQLTFLNI 375
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
++ +MK L+ L ++++ IG + + ++ + L LN+ + G ++ + L +
Sbjct: 100 YIGEMKQLKQLHIANNNIGPEGAKHISGL-EQLTILNIRANEITVDGAKFIS-EMKQLTV 157
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN-- 296
L++ G I D ++S M L +DIS +I ++ ++ T L + ++ +
Sbjct: 158 LNIIGNDICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMLNITKLNIGFNSINDCV 217
Query: 297 -----LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L LN+ + + + +S+F +L HLS+ + S+++ +S + + L
Sbjct: 218 ECFGKMKQLTDLNVNSSCIGLCGIVFISSFNQLTHLSIASNSISNYEASHISQMKNVIKL 277
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
I D + ++G+ S L L++ +T I CKM
Sbjct: 278 DISDNRIGDNGVQSISEMNQLTELNV-SSIDITPIGIQYICKM 319
>gi|87307769|ref|ZP_01089912.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
gi|87289383|gb|EAQ81274.1| serine/threonine protein kinase [Blastopirellula marina DSM 3645]
Length = 1283
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 167/388 (43%), Gaps = 44/388 (11%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V D + HL L S T + +G+A + + + L L +TD+ L
Sbjct: 889 VKDEWLTHLTHPEAFTDLGFSFTQIGDEGLAAFQNSKKIVNLHLEHTKITDVGLAYFHDC 948
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN--LSNCTI-- 130
+L+ + L + V++ G K +L L+LA T VT +++E L L NC I
Sbjct: 949 RELKSIRLRQTSVTDAGVLPFKHCSKLEELSLATTNVTA----AAVEELRAALPNCKITW 1004
Query: 131 --DSILEGNENK-----APLAKISLAGTTFINEREAFLYIETSL------LSFLD----- 172
D+ E E K A +S+ G +N ++ T L L+ ++
Sbjct: 1005 DGDAKTESPEEKNSDNLAAKYVLSIGGIVRLNGGGTDIHSATELPPAPFRLTHVNFNLCK 1064
Query: 173 -VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
++ L+ F + +L + + ++ G C +L+ LN + + + SAG+
Sbjct: 1065 KATDDGLAVFANCKDIVSLT-MRFTPNVTGRGLAYFKNC--KDLKELNCNYSPYVSAGLP 1121
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL 289
+LA + NLE +SL G + + ++ +P L F+++ T ++ AE+ L
Sbjct: 1122 LLA-NCKNLEKISLMGVKFTREELRPIAELP-LTFVNLGATPVQDEWLSDFTNAESLTYL 1179
Query: 290 S----------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
+ L A QN N L++L+L+ T ++D L ++L L L+N + D L
Sbjct: 1180 NFASTKIGDKGLAAFQNCNALQQLSLQDTNITDEGLAYFYDCRDLEILQLQNTKVRDFGL 1239
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
+ S KL + I +T +G+ K
Sbjct: 1240 LRFKSCQKLKQVEISKTRVTAAGVDELK 1267
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ D G+ + + L++L L +T +T +G+A ++L +L L V D L +
Sbjct: 1185 KIGDKGLAAFQNCNALQQLSLQDTNITDEGLAYFYDCRDLEILQLQNTKVRDFGLLRFKS 1244
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
KL+ +++ ++V+ G LK L + + W V
Sbjct: 1245 CQKLKQVEISKTRVTAAGVDELKK--SLPYCTVVWDDVA 1281
>gi|290978443|ref|XP_002671945.1| predicted protein [Naegleria gruberi]
gi|284085518|gb|EFC39201.1| predicted protein [Naegleria gruberi]
Length = 381
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 171/376 (45%), Gaps = 40/376 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S K G + + + L L +++ + +G + +++ L++L +
Sbjct: 25 MKGLTLLDVSEN-KFGKEGAEKISGMVGLTTLNINDNYILDEGAKFIGTMKQLTLLKMKY 83
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNIS 118
+ + R++ L L +L+L G+ + ++GA+ + L+ LN+ T +T ++S
Sbjct: 84 CEIREEGARAISELKNLTFLNLHGNFIGDKGASYISEMVNLTHLNVGSTQLTAEGARHVS 143
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L+ NL + I + +I G +I+ + + L+ LDVS +S+
Sbjct: 144 GLK--NLKSLLIHT-----------NQIGHQGAKWISTMK-----DLEGLTSLDVSGNSI 185
Query: 179 --SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+L++M L HLD+ S+ +G +E + + L +LN+S+ S+G +++G
Sbjct: 186 LDQGVQYLSEMSNLTHLDIGSNHVGVKGIESIIGM-KGLISLNVSSNDLGSSGAKLISG- 243
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ NL L++S ++ ++ M ++ + I N DI G E +
Sbjct: 244 MSNLTSLNISANRLLGEGAKFIGEMHNVTILVIRNNDI-------GDEGAKFIC-----K 291
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L+ LN ++S +S K+L L + S+ + L LT+L++R
Sbjct: 292 MKQLKSLNAVYNRISSKGFESISEMKQLTSLDIGYNSIDSKGAKSVRKLKNLTSLNVRSN 351
Query: 357 VLTNSGL---GSFKPP 369
++ + GL G K P
Sbjct: 352 MIDDEGLKAIGQLKIP 367
>gi|290984426|ref|XP_002674928.1| predicted protein [Naegleria gruberi]
gi|284088521|gb|EFC42184.1| predicted protein [Naegleria gruberi]
Length = 612
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 166/366 (45%), Gaps = 33/366 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+++ G K++ ++ L L++SE+G+ ++ +S L+ L+ LD+ V + + ++
Sbjct: 267 EISIEGAKYISKLNQLTSLYISESGIRSEQARYISELKQLTYLDVTKNYVREEGAKYIRN 326
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
+ KL L + + V +GA + +L+ L+++ + K L T SI
Sbjct: 327 MKKLTTLLVSENYVCEQGAEYISEMTQLTKLDISVNNINKK---GVFHICKLKQLTELSI 383
Query: 134 LEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
LE + + L IS L T +N F Y E + +++Q+ L
Sbjct: 384 LESHFDGEGLEYISELKNLTILN----FPYSEMRGVGVK-----------YISQLNQLTC 428
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L++ + I D+ + ++ + L+ L++S+ SS G L L NL L ++G + +
Sbjct: 429 LNIPYNRISDEGAKYISEL-KQLKELSISDNSISSEGANYLT-DLKNLTKLVITGNNLGN 486
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
++S + L +DIS+ I GA+ L +L +L L ++ + +
Sbjct: 487 DGAMHISELKKLTILDISHNSISS----EGAK--------HLSDLKNLTELVIKGNNLGN 534
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
+S K+L HL + + +++D +S +++LT LSI + ++ G+ +
Sbjct: 535 DGAMSISELKQLTHLDVCDNNISDEGFKAISKMNQLTRLSIYENSISGEGVEFIRKMTQS 594
Query: 373 KLLDLH 378
+D+
Sbjct: 595 TFIDIQ 600
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 176/411 (42%), Gaps = 57/411 (13%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQV 73
+ D ++ + + L L++S + ++G+ ++S S L+ L++ + ++ + +
Sbjct: 122 IDDEHVESMAELKQLTSLYISGNYIGSEGVKIISESFNKLTKLNISANYIDNVGAKYISQ 181
Query: 74 LTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSN 127
L +L L++ + + G L L+ L+++ G + L CLN++
Sbjct: 182 LKQLTSLEIACNDSIGDAGIIYLSGLEHLTNLDISRIKIGSGGAQYIGKFEQLTCLNINT 241
Query: 128 CTIDS-------------ILEGNENKAPLAKISLAGTTFINEREAF--LYI--------- 163
C+ID +L +EN+ IS+ G +I++ LYI
Sbjct: 242 CSIDDKVLQSISQLKKLIVLHISENE-----ISIEGAKYISKLNQLTSLYISESGIRSEQ 296
Query: 164 -----ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
E L++LDV+ + + ++ MK L L +S + + + E ++ + L
Sbjct: 297 ARYISELKQLTYLDVTKNYVREEGAKYIRNMKKLTTLLVSENYVCEQGAEYISEM-TQLT 355
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L++S + GV + L L LS+ + D + Y+S + +L ++ ++++G
Sbjct: 356 KLDISVNNINKKGVFHIC-KLKQLTELSILESHFDGEGLEYISELKNLTILNFPYSEMRG 414
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ + + LN L LN+ ++SD +S K+L LS+ + S++
Sbjct: 415 ------------VGVKYISQLNQLTCLNIPYNRISDEGAKYISELKQLKELSISDNSISS 462
Query: 337 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ L+ L LT L I L N G + L +LD+ + +E A
Sbjct: 463 EGANYLTDLKNLTKLVITGNNLGNDGAMHISELKKLTILDISHNSISSEGA 513
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 29/246 (11%)
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE----TDL 287
IL + NL I + G +ID +++Y+ + L ++I DI + AE T L
Sbjct: 80 ILMKSVTNLCIPYVVGVKIDSESVTYIGQLKQLTSLEIQGMDIDDEHVESMAELKQLTSL 139
Query: 288 VLSLTAL---------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDV 337
+S + ++ N L +LN+ + + +S K+L L + N S+ D
Sbjct: 140 YISGNYIGSEGVKIISESFNKLTKLNISANYIDNVGAKYISQLKQLTSLEIACNDSIGDA 199
Query: 338 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPR 397
+ LS L LTNL I + + G L L+++ + +D +LQ +
Sbjct: 200 GIIYLSGLEHLTNLDISRIKIGSGGAQYIGKFEQLTCLNINTCSI--DDKVLQSISQLKK 257
Query: 398 IEVWH----ELSV-----ICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRL 448
+ V H E+S+ I +Q+ S S + +R+ + + + ++LD
Sbjct: 258 LIVLHISENEISIEGAKYISKLNQLTS--LYISESGIRSEQARYISELKQL--TYLDVTK 313
Query: 449 KYSREE 454
Y REE
Sbjct: 314 NYVREE 319
>gi|219122964|ref|XP_002181805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407081|gb|EEC47019.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 486
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 39/364 (10%)
Query: 9 LSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP-VTDL 66
L C V G+ L S L L L+ LT + I +S LQ+L L L G +TD
Sbjct: 110 LDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQALSLDGCRCITDF 169
Query: 67 VLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 125
L +L + L L L ++N G L+ RL ++L W C +
Sbjct: 170 SLAALADMYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGW-------------CRQV 216
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL----YIETSLLSFLDVSNSSLSRF 181
S+ I ++ + L + LA +E +L ++T L + V + L++
Sbjct: 217 SDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQYLGKIRNVKTLELCYSAVKDIHLTK- 275
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVA--CVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
L + LE L+L S IGD +++ A V NL +L+L+++ S G+ +A
Sbjct: 276 --LVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIA-KFTK 332
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ LSL I + + ++S++ L+ +++ + DI L LQ+L
Sbjct: 333 LKRLSLFYCSISNRGLRHLSILTELRVLNLDSRDISDD------------GLRHLQHLKQ 380
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-RDAVL 358
L+ L++ +V+D LS K L L L + D L+ L LT+L++ ++ +
Sbjct: 381 LKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCASLAKLENLTSLNLSQNERI 440
Query: 359 TNSG 362
TN G
Sbjct: 441 TNRG 444
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 170/388 (43%), Gaps = 47/388 (12%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTD 65
L LS C VTD ++ L + S+ L T L A S+L N ++LDL G +TD
Sbjct: 35 LSLSGCRGVTDEWLEALSAESSDSPPHL-RTALMWHPCAASSALTNTTLLDLRGSQRLTD 93
Query: 66 LVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLN 124
L L L +LE L V RG VL PRL L+L C
Sbjct: 94 RGLMQLHDLGRLEVAKLDNCHSVVGRGLVVLSSSPRLHTLSLT-------------NCRR 140
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
L++ I +I + L +SL G I + + +L ++ LS+ +
Sbjct: 141 LTDEAIVNI----SHLQSLQALSLDGCRCITD-----FSLAALADMYNLRKLGLSQCDLI 191
Query: 185 TQ--MKALEHLDLSSSM-------IGDDSVEMVACV---GANLRNLNLSNTRFSSAGVGI 232
T +KALEHL + + D ++ + +NL+ L L+ + GV
Sbjct: 192 TNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQY 251
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
L G + N++ L L + + D ++ + +P L+ +++ + I Q A +++ +L
Sbjct: 252 L-GKIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLV 310
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
+L +L + +SD + ++ F +L LSL S+++ L LS L++L L+
Sbjct: 311 SL---------DLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTELRVLN 361
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
+ +++ GL + + LK LD+ G
Sbjct: 362 LDSRDISDDGLRHLQHLKQLKSLDIFSG 389
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 37/286 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSL----QNLSV 55
M L++L LS+C +T+ G+K L + L+++ L +D GI L++ NL +
Sbjct: 177 MYNLRKLGLSQCDLITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQI 236
Query: 56 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
L L P+TD ++ L + ++ L+L S V + +TKL
Sbjct: 237 LRLARCPITDEGVQYLGKIRNVKTLELCYSAVKD-------------------IHLTKLV 277
Query: 116 NISSLECLNLSNCTIDSIL---EGNENKAP-LAKISLAGTTFIN----EREAFLYIETSL 167
N+ LE LNL +C I + N N P L + LA + + + F ++
Sbjct: 278 NLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLS 337
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L + +SN L LT+++ L+L S I DD + + + L++L++ + R +
Sbjct: 338 LFYCSISNRGLRHLSILTELRV---LNLDSRDISDDGLRHLQHL-KQLKSLDIFSGRVTD 393
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
G L+ + LE L L G + D + ++ + +L +++S +
Sbjct: 394 LGCTYLS-KIKTLESLELCGGGVRDAGCASLAKLENLTSLNLSQNE 438
>gi|430746590|ref|YP_007205719.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
gi|430018310|gb|AGA30024.1| hypothetical protein Sinac_5908 [Singulisphaera acidiphila DSM
18658]
Length = 506
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 25/295 (8%)
Query: 105 NLAWTGVTKLPNISSLECLNLSNCTIDS--ILEGNENKAPLAKISLAGTTFINEREAFLY 162
NL G+ +L +S L+ L++ T DS L G K L+ + L ++ A +
Sbjct: 162 NLTPAGMAQLRTLSRLKGLSVRGFT-DSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAIIG 220
Query: 163 IETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-----DSVEMVACVGANLR 216
T L LD N + F + +K L LD+ I D D V++ +G +
Sbjct: 221 GLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLAPVTDLVQL-DVLGLSPD 279
Query: 217 NLNLSNTRFSSAG---VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
+ + S G +G L G L NL L+L TQI+D ++ + +P L ++ I
Sbjct: 280 RATFARSVPSPGGPSSLGPLRG-LTNLTQLTLGATQIEDRELAVAAGLPKLSYLMIGGRR 338
Query: 274 IK----GFIQQVGAETDLVLSLTALQNLNHLE-------RLNLEQTQVSDATLFPLSTFK 322
I + + + T L + T++ +L L L +E + ++DA L PLS
Sbjct: 339 ITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALWGLYMENSALTDAGLEPLSDAT 398
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ L++ + +TD LH L+ L L L + + +T++GLG K +SL+ L L
Sbjct: 399 RIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDAGLGRLKSLKSLETLSL 453
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 160/356 (44%), Gaps = 36/356 (10%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQN---LSVLDLGGLPVTDLVLRSL 71
+T AGM L ++S L+ L S G T D L+ L LS L L VTD + +
Sbjct: 163 LTPAGMAQLRTLSRLKGL--SVRGFT-DSHGFLAGLMGKTRLSHLRLPEAAVTDDEMAII 219
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 131
LT LE L L G V++RG A + LS L++ +T L ++ L L++ + D
Sbjct: 220 GGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGVRITDLAPVTDLVQLDVLGLSPD 279
Query: 132 SILEGNENKAPLAKISLA-------------GTTFINEREAFLYIETSLLSFLDVSNSSL 178
+P SL G T I +RE + LS+L + +
Sbjct: 280 RATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQIEDRELAVAAGLPKLSYLMIGGRRI 339
Query: 179 SR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ L + K+L L + + I D + ++ L L + N+ + AG+ L+
Sbjct: 340 TEAGLARLAESKSLTGLRFTDTSIAD--LRPLSPRLHALWGLYMENSALTDAGLEPLS-D 396
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L+++G+++ D + +++ +PSL + + + I TD L L++
Sbjct: 397 ATRIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAI----------TD--AGLGRLKS 444
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
L LE L+L +T+++D+++ L+ F+ L L+L + ++ + +L T +S
Sbjct: 445 LKSLETLSLTETKLTDSSVETLAGFQSLKSLNLDRSGISPAGIERLKQALPKTQIS 500
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 70/308 (22%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L L L VTD M + ++ LE L L +T G A +++L+ LS+LD+ G+
Sbjct: 199 TRLSHLRLPEAA-VTDDEMAIIGGLTDLEVLQLDGRNVTDRGFAHVANLKELSLLDMPGV 257
Query: 62 ------PVTDLV--------------------------LRSLQVLTKLEYLDLWGSQVSN 89
PVTDLV L L+ LT L L L +Q+ +
Sbjct: 258 RITDLAPVTDLVQLDVLGLSPDRATFARSVPSPGGPSSLGPLRGLTNLTQLTLGATQIED 317
Query: 90 RGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTI-------------- 130
R AV P+LS+L + G+ +L SL L ++ +I
Sbjct: 318 RELAVAAGLPKLSYLMIGGRRITEAGLARLAESKSLTGLRFTDTSIADLRPLSPRLHALW 377
Query: 131 ----------DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL----LSFLDVSNS 176
D+ LE + + +++ G+ + L SL L ++++
Sbjct: 378 GLYMENSALTDAGLEPLSDATRIGDLTITGSRMTDAGLHHLAPLPSLWKLRLGRSAITDA 437
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L R L +K+LE L L+ + + D SVE +A +L++LNL + S AG+ L
Sbjct: 438 GLGR---LKSLKSLETLSLTETKLTDSSVETLAGF-QSLKSLNLDRSGISPAGIERLKQA 493
Query: 237 LPNLEILS 244
LP +I S
Sbjct: 494 LPKTQISS 501
>gi|348503268|ref|XP_003439187.1| PREDICTED: hypothetical protein LOC100705990 [Oreochromis
niloticus]
Length = 894
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 70/372 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL-LSSLQN-LSVLDLGGL 61
L+ L+L+ C K+TD+ ++H+ + L L L +T +T G+ L L S+ + LS L L
Sbjct: 552 LQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTKVTDAGMVLYLQSVPSCLSQLSLNQT 611
Query: 62 PVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
VT+ L L + +L L + ++V + A L L LNL TGVT+ +SL
Sbjct: 612 AVTETTLAVLPTSVPQLRLLSIKQTKVKDLTA--LAAMSSLQTLNLDGTGVTE----ASL 665
Query: 121 ECLN----LSNCTIDSILEGNENKA-------PLAKISLAGTTFINEREAFLYIETSLLS 169
E L L++ T+ I + + A L +I+L G + + +LLS
Sbjct: 666 EHLATHPALTSLTLVGIPVADGSHALQIISGLKLTRITLPGRHSVTDSGLSFLSRLTLLS 725
Query: 170 FLD------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
LD +++ +S LT++K L LS++ + D + + C+ L+ L L T
Sbjct: 726 ELDLTDYTQITDQGVSHLSTLTRLKKL---SLSNTQVTDAGLPSLRCM-QELQELCLDRT 781
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+S GV L LP+L++L L+ TQ+ D + KG I+
Sbjct: 782 AVTSRGVADLITCLPHLQVLGLASTQVGDNVVR------------------KGLIR---- 819
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
+ L +LNL +T+++D L + + + L+ N T VSL ++
Sbjct: 820 -------------CSQLVKLNLSRTRITDHGL----KYLKQMRLAQVNLDGTGVSLMGIA 862
Query: 344 SLSKLTNL-SIR 354
SL TN+ SIR
Sbjct: 863 SLLSCTNINSIR 874
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 27/153 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS------------------------E 36
+T L ELDL+ ++TD G+ HL +++ L+KL LS
Sbjct: 721 LTLLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPSLRCMQELQELCLDR 780
Query: 37 TGLTADGIA-LLSSLQNLSVLDLGGLPVTDLVLR-SLQVLTKLEYLDLWGSQVSNRGAAV 94
T +T+ G+A L++ L +L VL L V D V+R L ++L L+L +++++ G
Sbjct: 781 TAVTSRGVADLITCLPHLQVLGLASTQVGDNVVRKGLIRCSQLVKLNLSRTRITDHGLKY 840
Query: 95 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 127
LK RL+ +NL TGV+ + S L C N+++
Sbjct: 841 LKQM-RLAQVNLDGTGVSLMGIASLLSCTNINS 872
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 37/307 (12%)
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
T+ +LR L+ T L++L L S +++ G +L +L +LNLA C
Sbjct: 514 TNELLRQLRAFTALKHLSLVNSPLITDSGLCILSTLVKLQYLNLA-------------SC 560
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET--SLLSFLDVSNSSLSR 180
L++ + I G +N L +SL T + + LY+++ S LS L ++ ++++
Sbjct: 561 SKLTDSCLQHIT-GLKN---LCFLSL-DQTKVTDAGMVLYLQSVPSCLSQLSLNQTAVTE 615
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLP 238
++ L L S I V+ + + A +L+ LNL T + A + LA H P
Sbjct: 616 TTLAVLPTSVPQLRLLS--IKQTKVKDLTALAAMSSLQTLNLDGTGVTEASLEHLATH-P 672
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L+L G + D + + + ++ LK I+ + + TD LS L L
Sbjct: 673 ALTSLTLVGIPVADGSHA-LQIISGLKLTRIT-------LPGRHSVTDSGLSF--LSRLT 722
Query: 299 HLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L L+L + TQ++D + LST L LSL N +TD L L + +L L +
Sbjct: 723 LLSELDLTDYTQITDQGVSHLSTLTRLKKLSLSNTQVTDAGLPSLRCMQELQELCLDRTA 782
Query: 358 LTNSGLG 364
+T+ G+
Sbjct: 783 VTSRGVA 789
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 37/270 (13%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
KV D + L ++S+L+ L L TG+T + L++ L+ L L G+PV D +LQ
Sbjct: 636 TKVKD--LTALAAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVADGS-HALQ 692
Query: 73 VLT--KLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLA-WT-----GVTKLPNISSLECL 123
+++ KL + L G V++ G + L LS L+L +T GV+ L ++ L+ L
Sbjct: 693 IISGLKLTRITLPGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKKL 752
Query: 124 NLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
+LSN + D+ L L ++ L T + A L
Sbjct: 753 SLSNTQVTDAGLPSLRCMQELQELCLDRTAVTSRGVADL--------------------- 791
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+T + L+ L L+S+ +GD+ V + L LNLS TR + G+ L L
Sbjct: 792 -ITCLPHLQVLGLASTQVGDNVVRKGLIRCSQLVKLNLSRTRITDHGLKYLKQM--RLAQ 848
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
++L GT + I+ + ++ I SNT
Sbjct: 849 VNLDGTGVSLMGIASLLSCTNINSIRASNT 878
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
Query: 63 VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+TD L L L KL+YL+L S++++ + L FL+L T VT + L+
Sbjct: 538 ITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGLKNLCFLSLDQTKVTDAGMVLYLQ 597
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
++ +C L+++SL T A L L L + + +
Sbjct: 598 --SVPSC--------------LSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVKDL 641
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS--SAGVGILAGHLPN 239
L M +L+ L+L + + + S+E +A A L +L L + S + I++G
Sbjct: 642 TALAAMSSLQTLNLDGTGVTEASLEHLATHPA-LTSLTLVGIPVADGSHALQIISGL--K 698
Query: 240 LEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L ++L G + D +S++S + L +D+ TD Q ++ L L
Sbjct: 699 LTRITLPGRHSVTDSGLSFLSRLTLLSELDL--TDYTQITDQ---------GVSHLSTLT 747
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 335
L++L+L TQV+DA L L +EL L L ++T
Sbjct: 748 RLKKLSLSNTQVTDAGLPSLRCMQELQELCLDRTAVT 784
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 72/257 (28%)
Query: 168 LSFLDVSNSSL---SRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNT 223
L L + NS L S C L+ + L++L+L+S S + D ++ + + NL L+L T
Sbjct: 527 LKHLSLVNSPLITDSGLCILSTLVKLQYLNLASCSKLTDSCLQHITGL-KNLCFLSLDQT 585
Query: 224 RFSSAGVGILAGHLPN-LEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQV 281
+ + AG+ + +P+ L LSL+ T + + ++ + + +P L+ + I T +K
Sbjct: 586 KVTDAGMVLYLQSVPSCLSQLSLNQTAVTETTLAVLPTSVPQLRLLSIKQTKVK------ 639
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL----------------- 324
LTAL ++ L+ LNL+ T V++A+L L+T L
Sbjct: 640 --------DLTALAAMSSLQTLNLDGTGVTEASLEHLATHPALTSLTLVGIPVADGSHAL 691
Query: 325 ----------IHLSLRNA------------------------SLTDVSLHQLSSLSKLTN 350
I L R++ +TD + LS+L++L
Sbjct: 692 QIISGLKLTRITLPGRHSVTDSGLSFLSRLTLLSELDLTDYTQITDQGVSHLSTLTRLKK 751
Query: 351 LSIRDAVLTNSGLGSFK 367
LS+ + +T++GL S +
Sbjct: 752 LSLSNTQVTDAGLPSLR 768
>gi|290993931|ref|XP_002679586.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
gi|284093203|gb|EFC46842.1| hypothetical protein NAEGRDRAFT_47566 [Naegleria gruberi]
Length = 675
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 34/302 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGG- 60
L L++ C +TD G+K+L IS L L L T + ++ +S L+ LD+ G
Sbjct: 341 LHTLNVQGCHYITDNGVKYLTYISQNLTHLNLRGCTKVNDSAMSYISQFSQLNYLDMTGC 400
Query: 61 LPVTDLVLRSLQ---VLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------G 110
+ VTDL ++ L TKL+YLDL + QV++ G L L L L G
Sbjct: 401 VNVTDLGVKHLSQSACKTKLKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHITAKG 460
Query: 111 VTKLPN-ISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINER------EAFLY 162
+T+L N ++ LNL+ C + I P L K+S+ G ++ +
Sbjct: 461 LTQLVNSCQNIRVLNLTGCHLLEISGVRSGSLPKLEKLSMMGCKLTSDNCLRVISDWTCN 520
Query: 163 IETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRN--- 217
++ +LSF D +++ + R + K L HL+L S I D S+E C+ +L N
Sbjct: 521 LKELVLSFSDMITDGGIER--VIINSKNLSHLNLKKCSNITDKSLE---CISKHLSNVVE 575
Query: 218 -LNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDI 274
LNL+ R F++ G+ L E + +++ +++++ PSL+ +DIS NT I
Sbjct: 576 YLNLTGVRGFTNGGLKYLENCTSLKEFVIQRCIHVNNEGLAHLAYCPSLEILDISENTLI 635
Query: 275 KG 276
G
Sbjct: 636 TG 637
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIA-LLSSLQNLSVLDLG 59
T LK LDL+ C +VTD G+++L ++ LE L L +TA G+ L++S QN+ VL+L
Sbjct: 418 TKLKYLDLTFCHQVTDEGVRYLSEMTELEDLTLQCCRHITAKGLTQLVNSCQNIRVLNLT 477
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
G + ++ L KLE L + G +++
Sbjct: 478 GCHLLEISGVRSGSLPKLEKLSMMGCKLT 506
>gi|326528121|dbj|BAJ89112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1068
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 191/450 (42%), Gaps = 75/450 (16%)
Query: 23 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ LE L LS G ++ L S++NL L+L G+P T V L L+KL++
Sbjct: 130 LLSLKHLEHLDLSMNCLLGPSSHIPRFLGSMENLRYLNLSGMPFTGRVPSQLGNLSKLQH 189
Query: 80 LDLWG---SQVSNRGAAVLKMFPRLSFLNLAWTGVTK-------LPNISSLECLNLSNCT 129
LDL S++ + L P L +L+L+ +++ L I SL ++LS+C+
Sbjct: 190 LDLGQDDYSEMYSMDITWLTKLPLLQYLSLSGINLSRIAVWPRTLNTIPSLRVIHLSDCS 249
Query: 130 IDSILEG--NENKAPLAKISLAGTTFINE-REAFLYIETSL------------------- 167
+D+ + + N L K+ L+ ++ + TSL
Sbjct: 250 LDTASQSLPHLNLTKLEKLDLSYNNLDRSIASSWFWKVTSLKYLSLRQNRLLGKFPDALG 309
Query: 168 ----LSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSV--EMVACVGANLRNLNL 220
L LD+S+++L++ L + LE LDLS +SM GD V E + C L+ L+
Sbjct: 310 NMTSLKVLDLSDNNLNKTGNLKNLCHLEILDLSDNSMNGDIVVLMEGLQCAREKLQELHF 369
Query: 221 SNTRFSSAGVGIL---AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
+ +F +G L G +L IL +S + + + L ++D+S + G
Sbjct: 370 NGNKF----IGTLPNVVGEFSSLRILDMSNNNLFGLIPLGLCNLVRLTYLDLSMNQLNGN 425
Query: 278 I-QQVGAETDLVL------SLTA-----LQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
+ ++GA T L +LT L L HL L+L+ +++ + L
Sbjct: 426 VPTEIGALTALTYLVIFSNNLTGSIPAELGKLKHLTILSLKDNKITGPIPPEVMHSTSLT 485
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRD----AVLTNSGLGSFKPPRSLKL------- 374
L L + L ++L L + L + + V+T + K S+ L
Sbjct: 486 TLDLSSNHLNGTVPNELGYLKNMIGLDLSNNNLSGVITEEHFANLKSLYSIDLSSNSLRI 545
Query: 375 ---LDLHGGWLLTEDAILQFCKMHPRIEVW 401
D H ++ + AI C+M P VW
Sbjct: 546 VVDSDWHSPFISLQTAIFASCQMGPLFPVW 575
>gi|283779302|ref|YP_003370057.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
gi|283437755|gb|ADB16197.1| hypothetical protein Psta_1522 [Pirellula staleyi DSM 6068]
Length = 303
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 51/256 (19%)
Query: 133 ILEGNENKAPLAKISLAGTTFINER------EAFLYIETSLLSFLDVSNSSL--SRFCFL 184
+L E + +++ + G+ N R +A Y + L LD+S +S S L
Sbjct: 68 LLRSREQQQIFSRVVMVGSH--NNRLRYEPTDAAAYASLTQLQQLDLSTTSADDSLLQVL 125
Query: 185 TQMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
Q++ LE LDLS +++ G D + LR LNL+NTRF A ++ G LP LE L
Sbjct: 126 PQLRQLETLDLSGTLVTGHDCPSLAGLT--QLRELNLANTRFQPAAWRVING-LPKLEKL 182
Query: 244 SLSGTQIDD-YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
+L TQ+DD + I P HL+
Sbjct: 183 NLGSTQVDDAWVIELCQRQP------------------------------------HLQL 206
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L L +T+V+D ++ +++ + L L L S+T+ + QL+ L + I + +
Sbjct: 207 LGLSKTKVTDQSMSAIASLRLLETLYLEQVSITNQGVQQLAKSRSLRCIDIGHNAIDDGC 266
Query: 363 LGSFKPPRSLKLLDLH 378
+ + S+K + +H
Sbjct: 267 IAALIAMPSMKAISIH 282
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 45 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
A +SL L LDL D +L+ L L +LE LDL G+ V+ L +L L
Sbjct: 99 AAYASLTQLQQLDLSTTSADDSLLQVLPQLRQLETLDLSGTLVTGHDCPSLAGLTQLREL 158
Query: 105 NL--------AWTGVTKLPNISSLECLNLSNCTIDS--ILEGNENKAPLAKISLAGTTFI 154
NL AW + LP LE LNL + +D ++E + + L + L+ T
Sbjct: 159 NLANTRFQPAAWRVINGLPK---LEKLNLGSTQVDDAWVIELCQRQPHLQLLGLSKTKVT 215
Query: 155 NER----EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
++ + +ET L + ++N + + L + ++L +D+ + I D + +
Sbjct: 216 DQSMSAIASLRLLETLYLEQVSITNQGVQQ---LAKSRSLRCIDIGHNAIDDGCIAALIA 272
Query: 211 VGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ +++ +++ +F++ G + +P
Sbjct: 273 M-PSMKAISIHRCKFTAEGKAKVHQAIP 299
>gi|171912739|ref|ZP_02928209.1| Leucine-rich repeat [Verrucomicrobium spinosum DSM 4136]
Length = 443
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 164/342 (47%), Gaps = 37/342 (10%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
I LS+L L L+L VTD + LQ L L+ LDL+ + VS+ L L
Sbjct: 121 IEPLSALSQLQCLELCQTQVTDF--KPLQRLGALQQLDLYSTSVSD--LEPLAALHALQQ 176
Query: 104 LNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLY 162
LN+ T VT L ++ L L N + + E + PLAKI+ L F R A ++
Sbjct: 177 LNICSTKVTDLEPLAGLSSLRQFNFSFTGVTELD----PLAKITTLQQLEF---RLAPIF 229
Query: 163 IETSL-----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
+L L LD+S + + L+ + AL+ L + + + D + +A + A LR
Sbjct: 230 DLDALAGLRELQKLDLSTTEVRDLEPLSGLGALQKLYFNHTAVSD--LGPLAGLSA-LRK 286
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L+L R + +G LAG L L+ L L+ TQ+ D ++ ++ + +L+ +D+S T +
Sbjct: 287 LDLRCARRVT-DIGPLAG-LHALQRLILASTQVTD--LTPLTELRNLQHLDLSRTKVSDL 342
Query: 278 --------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
++ +G + V L L L+RL L+ TQVSD L P++ L L +
Sbjct: 343 SPLTSLTALRSLGLTSTQVSDLAPLAAYRDLQRLFLDSTQVSD--LGPVAGMNSLQELYV 400
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
+ S+TD L L+ L++L LS+ D NS + P S
Sbjct: 401 SHTSVTD--LGPLAGLTELKRLSV-DECAVNSMPPTISPNES 439
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 56/301 (18%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTA-DGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
KVTD ++ L +S+L + S TG+T D +A +++LQ L + P+ DL +L
Sbjct: 182 TKVTD--LEPLAGLSSLRQFNFSFTGVTELDPLAKITTLQQL---EFRLAPIFDL--DAL 234
Query: 72 QVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTI 130
L +L+ LDL ++V + + L +L F + A + + L +S+L L+L C
Sbjct: 235 AGLRELQKLDLSTTEVRDLEPLSGLGALQKLYFNHTAVSDLGPLAGLSALRKLDL-RCA- 292
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ PLA + L L ++++ ++ LT+++ L
Sbjct: 293 ----RRVTDIGPLAGLHA-------------------LQRLILASTQVTDLTPLTELRNL 329
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
+HLDLS + + D + + + A LR+L L++T+ S + LA + +L+ L L TQ+
Sbjct: 330 QHLDLSRTKVSD--LSPLTSLTA-LRSLGLTSTQVSD--LAPLAAYR-DLQRLFLDSTQV 383
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D + ++ M SL+ + +S+T + TD L L L L+RL++++ V
Sbjct: 384 SD--LGPVAGMNSLQELYVSHTSV----------TD----LGPLAGLTELKRLSVDECAV 427
Query: 311 S 311
+
Sbjct: 428 N 428
>gi|326679785|ref|XP_002660968.2| PREDICTED: hypothetical protein LOC100332407 [Danio rerio]
Length = 537
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL--SSLQNLSVLDLGGL 61
L+ L+LS C K+TD+ ++H+ + +L L L +T ++ G+ L S L L L
Sbjct: 189 LQHLNLSSCSKLTDSCLQHITGLRSLTFLALDQTKVSDAGLLLYLQSGSSALCQLSLNQT 248
Query: 62 PVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+T+ LR L + +L L + ++VS+ + L L L+L TGV + +SL
Sbjct: 249 AITESTLRVLPASVPQLRMLSIKHTKVSD--VSALAELKNLQTLHLDGTGVQE----NSL 302
Query: 121 ECL----NLSNCTIDSI--LEGNENKAPLAKISLAGTTFINERE------AFLYIETSLL 168
+CL +LS ++ I +GN +A + L T +FL +T LL
Sbjct: 303 QCLASHPSLSALSLAGIPVADGNHTLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLL 362
Query: 169 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
+ L+ L+ M L+ L LS++ + D ++ + + L+ L L T +
Sbjct: 363 ELDLTDYTQLTDHGITQLSSMTRLKKLSLSNTQVSDSGLQGLIRL-KELQELCLDRTAVT 421
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISY-MSMMPSLKFIDISNTDI 274
S GV L HLP+L+++ L+ TQ+ D I + P L +++S T I
Sbjct: 422 SRGVAALITHLPHLQVMGLASTQVGDTVIRRGLVHCPQLLKLNLSRTRI 470
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 44/286 (15%)
Query: 101 LSFLN---LAWTGVTKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFIN 155
LSFLN + G++ L N+S L+ LNLS+C+ DS L+ L ++L T ++
Sbjct: 167 LSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQHITGLRSLTFLAL-DQTKVS 225
Query: 156 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
+ LY++ S SS AL L L+ + I + ++ ++ L
Sbjct: 226 DAGLLLYLQ---------SGSS-----------ALCQLSLNQTAITESTLRVLPASVPQL 265
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
R L++ +T+ S V LA L NL+ L L GT + + ++ ++ PSL + ++ +
Sbjct: 266 RMLSIKHTKVSD--VSALA-ELKNLQTLHLDGTGVQENSLQCLASHPSLSALSLAGIPVA 322
Query: 276 GFIQQVGAETDLVLSLTAL--------QNLNHLER-------LNLEQTQVSDATLFPLST 320
+ L L+ L L+ L R + TQ++D + LS+
Sbjct: 323 DGNHTLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHGITQLSS 382
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
L LSL N ++D L L L +L L + +T+ G+ +
Sbjct: 383 MTRLKKLSLSNTQVSDSGLQGLIRLKELQELCLDRTAVTSRGVAAL 428
>gi|46447589|ref|YP_008954.1| hypothetical protein pc1955 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401230|emb|CAF24679.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 454
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+L CV +TDAG+ HL ++ L+ L LS +T G+A L+ L +L L+L
Sbjct: 244 LTSLQHLNLYFCVNLTDAGLAHLTPLTALQHLNLSYCWKITDAGLAHLTPLTDLQHLNLS 303
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L YL+L ++N G A L L +LNL W G
Sbjct: 304 DCENLTDAGLAHLTPLTALLYLNLSKCYHLTNVGLAHLAPLTGLQYLNLKWCWNLTDAGF 363
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ L ++++L+ L+LS+C EN ++ AG ++ A Y+ S
Sbjct: 364 SHLASLTALQHLDLSDC---------EN------LTDAGLAYLASLTALQYLGLS----- 403
Query: 172 DVSNSSLSRFCFLTQMKALEHLDL 195
N + LT + AL+HLDL
Sbjct: 404 QCRNLTDVGLAHLTPLTALQHLDL 427
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 68/274 (24%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL- 61
LK L L C +TD G+ HL +++L+ L L LT G+A L+ L L L+L
Sbjct: 222 LKLLHLEACQAITDDGLAHLALLTSLQHLNLYFCVNLTDAGLAHLTPLTALQHLNLSYCW 281
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TD L L LT L++L+L + +++ G A L L +LNL+
Sbjct: 282 KITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTALLYLNLS------------- 328
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+C +L+N G + APL G ++N + + N + +
Sbjct: 329 KCYHLTNV-------GLAHLAPLT-----GLQYLNLKWCW--------------NLTDAG 362
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
F L + AL+HLDLS + AG+ LA L L
Sbjct: 363 FSHLASLTALQHLDLSDC------------------------ENLTDAGLAYLAS-LTAL 397
Query: 241 EILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTD 273
+ L LS + + D +++++ + +L+ +D+ D
Sbjct: 398 QYLGLSQCRNLTDVGLAHLTPLTALQHLDLRECD 431
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 239 NLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
NL++L L Q I D +++++++ SL+ +++ + A + LTALQ
Sbjct: 221 NLKLLHLEACQAITDDGLAHLALLTSLQHLNLYFC-----VNLTDAGLAHLTPLTALQ-- 273
Query: 298 NHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 355
LNL +++DA L L+ +L HL+L + +LTD L L+ L+ L L++
Sbjct: 274 ----HLNLSYCWKITDAGLAHLTPLTDLQHLNLSDCENLTDAGLAHLTPLTALLYLNLSK 329
Query: 356 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
LTN GL P L+ L+L W LT+
Sbjct: 330 CYHLTNVGLAHLAPLTGLQYLNLKWCWNLTD 360
>gi|290992226|ref|XP_002678735.1| predicted protein [Naegleria gruberi]
gi|284092349|gb|EFC45991.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ + G K + I +L +L + L A+G+ LS L+NL +L + + D + +
Sbjct: 205 QIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVVHICK 264
Query: 74 LTKLEYLDLWGSQVSNRGAAVL-KMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNC 128
L +L +LDLW ++++ G ++ K P+++ L N+ G L + L L
Sbjct: 265 LKQLTHLDLWNTEITAEGIELVSKQLPKVTHLHISINVIRDGTKFLGEMKQLTTLEADEI 324
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQ 186
+D+ EG + L K L+FL V+N+ + C +++
Sbjct: 325 ELDA--EGLKYLVGLKK----------------------LNFLSVNNNLFGAEGCKVVSE 360
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL-AGHLPNLEILSL 245
MK LE L ++ + IGD+ V+ + C +L +L L N GV +L +G+L NL L +
Sbjct: 361 MKQLEELCMNDNNIGDNGVQYL-CELKSLTSLCLWNNNIGIEGVKLLCSGNLNNLTTLDI 419
Query: 246 SGTQI---DDYAISYMSMMPSL 264
G QI D + M + L
Sbjct: 420 RGNQITKSDSHLFENMKQLTEL 441
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 163/404 (40%), Gaps = 91/404 (22%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L++S KV G K + + L KL +S + A+G + +Q L+ L++ G +
Sbjct: 91 LKSLEISSDHKVGYDGAKVIGQLKQLTKLDISFNTIGAEGAKFIGEMQQLTYLNIYGNSL 150
Query: 64 TDLVLRSLQVLTKLEYLDL--------WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
T +R + LT L YL++ G GA L+ +L+ L++ + +
Sbjct: 151 TSEGIRFISQLTNLTYLNVRFNEDFRFGGHDKGLEGAQYLRNLQKLTSLDIGYNQI---- 206
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
GN+ G FI E ++ L+ L + N
Sbjct: 207 --------------------GND-----------GAKFIGEIQS--------LTELTIRN 227
Query: 176 SSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
++L +L+++K L L ++++ I D+ V + C L +L+L NT ++ G+ ++
Sbjct: 228 NNLKAEGVRWLSKLKNLRLLSINNNHIKDEGVVHI-CKLKQLTHLDLWNTEITAEGIELV 286
Query: 234 AGHLPNLEILSLS------GT-----------------QIDDYAISYMSMMPSLKFIDIS 270
+ LP + L +S GT ++D + Y+ + L F+ ++
Sbjct: 287 SKQLPKVTHLHISINVIRDGTKFLGEMKQLTTLEADEIELDAEGLKYLVGLKKLNFLSVN 346
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL- 329
N GAE V+S + LE L + + D + L K L L L
Sbjct: 347 NN-------LFGAEGCKVVS-----EMKQLEELCMNDNNIGDNGVQYLCELKSLTSLCLW 394
Query: 330 -RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
N + V L +L+ LT L IR +T S F+ + L
Sbjct: 395 NNNIGIEGVKLLCSGNLNNLTTLDIRGNQITKSDSHLFENMKQL 438
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 15/252 (5%)
Query: 184 LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+ Q++ L+ L++SS +G D +++ + L L++S + G + G + L
Sbjct: 85 IAQLEQLKSLEISSDHKVGYDGAKVIGQL-KQLTKLDISFNTIGAEGAKFI-GEMQQLTY 142
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L++ G + I ++S + +L ++++ N D + G + L+NL L
Sbjct: 143 LNIYGNSLTSEGIRFISQLTNLTYLNVRFNEDFR-----FGGHDKGLEGAQYLRNLQKLT 197
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
L++ Q+ + + + L L++RN +L + LS L L LSI + + +
Sbjct: 198 SLDIGYNQIGNDGAKFIGEIQSLTELTIRNNNLKAEGVRWLSKLKNLRLLSINNNHIKDE 257
Query: 362 GLGSFKPPRSLKLLDLHGGW--LLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPS 419
G+ + L LDL W +T + I K P++ H +S+ D G
Sbjct: 258 GVVHICKLKQLTHLDL---WNTEITAEGIELVSKQLPKVTHLH-ISINVIRDGTKFLGEM 313
Query: 420 PSRTSLRASLVK 431
T+L A ++
Sbjct: 314 KQLTTLEADEIE 325
>gi|405751552|ref|YP_006675017.1| internalin I [Listeria monocytogenes SLCC2378]
gi|404220752|emb|CBY72115.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2378]
Length = 1775
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 41/342 (11%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTDNY 640
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL-EQT 308
++ M + L+ +++ N ++ G E +L +AL +L +L LNL +
Sbjct: 641 SYLRSLGTMDGVSKLRNLELQNN----YLNYTGTEGNL----SALSDLTNLTELNLRDNG 692
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT 349
+SD + LST LI+L+L + + D+S L L++L +LT
Sbjct: 693 YISDIS--GLSTLSRLIYLNLDSNKIKDISALSNLTTLQELT 732
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 98/393 (24%), Positives = 162/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND--------------------------LPRLSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVGK---MTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ + D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|168700559|ref|ZP_02732836.1| hypothetical protein GobsU_13597 [Gemmata obscuriglobus UQM 2246]
Length = 446
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 114/288 (39%), Gaps = 74/288 (25%)
Query: 14 KVTDAGMKHLLSISTL----------------EKLW-------LSETGLTADGIALLSSL 50
K TDAG+K L ++ L E W ++T A G+ +S+L
Sbjct: 185 KFTDAGLKELAALPALGSVNVTATPVTGTAFAEPGWSRLREIDATQTAFNAAGLEAVSAL 244
Query: 51 QNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 110
L L L VTD L+ L L+ L L + V++ G A L L LNL TG
Sbjct: 245 PVLGTLTLDATAVTDSGLKHLARARALQELSLADTPVADTGVAALAGVQTLRVLNLERTG 304
Query: 111 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--- 167
VT + T E L K++LA T F + + L +L
Sbjct: 305 VT-----------GAAFATFPVPAE-------LRKLNLAETRFTDASGSHLARLPALTNL 346
Query: 168 -LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
LS DV+++ L+R L +K L +LDL+ + GD + E+
Sbjct: 347 SLSGCDVTDAGLAR---LADLKKLANLDLTGTKAGDGAAEV------------------- 384
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
AG L LE++S GTQ+ D + + L+F+ + + +
Sbjct: 385 -------AGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKV 425
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
LR ++ + T F++AG+ ++ LP L L+L T + D + +++ +L+ + +++T
Sbjct: 222 RLREIDATQTAFNAAGLEAVSA-LPVLGTLTLDATAVTDSGLKHLARARALQELSLADTP 280
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ A+T + AL + L LNLE+T V+ A EL L+L
Sbjct: 281 V--------ADT----GVAALAGVQTLRVLNLERTGVTGAAFATFPVPAELRKLNLAETR 328
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
TD S L+ L LTNLS+ +T++GL + L LDL G
Sbjct: 329 FTDASGSHLARLPALTNLSLSGCDVTDAGLARLADLKKLANLDLTG 374
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L+L+ + TDA HL + L L LS +T G+A L+ L+ L+ LDL G
Sbjct: 319 LRKLNLAE-TRFTDASGSHLARLPALTNLSLSGCDVTDAGLARLADLKKLANLDLTGTKA 377
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
D L +LE + G+Q+++ G RL FL + + VTK
Sbjct: 378 GDGAAEVAGTLAELEVVSFRGTQLTDAGLKAAAHGARLRFLYVRGSKVTK 427
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA-LLSSLQNLSVLDLG 59
+ L L LS C VTDAG+ L + L L L+ T DG A + +L L V+
Sbjct: 340 LPALTNLSLSGC-DVTDAGLARLADLKKLANLDLTGT-KAGDGAAEVAGTLAELEVVSFR 397
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA 92
G +TD L++ +L +L + GS+V+ RGA
Sbjct: 398 GTQLTDAGLKAAAHGARLRFLYVRGSKVTKRGA 430
>gi|290991306|ref|XP_002678276.1| predicted protein [Naegleria gruberi]
gi|284091888|gb|EFC45532.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 168/380 (44%), Gaps = 36/380 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L L++S ++ D K ++ + L L + + +GI L+S ++ L++LD+ G
Sbjct: 100 MKQLTSLNISNN-QINDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISG 158
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ D ++ + + +L L+++ +++ G+ + +L+ L++++ + S
Sbjct: 159 NSIGDKGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSIS 218
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
E L++ T+ GN+ I G I+E + L+ LD+S +S+
Sbjct: 219 ELKQLTSLTVS----GNQ-------IGDEGIKLISEMKQ--------LTLLDISGNSIGD 259
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+++MK L L++ ++ IG + + + L +L++S G ++ +
Sbjct: 260 KGVKPISKMKQLTSLNIYNNEIGVAGSKFIIEM-KQLTSLDISYNEIGDEGAKSIS-EMK 317
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L L++SG QI D I +S M L +DIS + VG + + ++ +
Sbjct: 318 QLTSLTISGNQIGDEGIKLISEMKQLTLLDISG-------KSVGDK-----GVKSISKMK 365
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L L + ++ A +S K+L L + + D +S L +LT L I +
Sbjct: 366 QLTSLTIYTNEIGVAGAKFISEMKQLTSLDISYNEIGDEGAKSISELKQLTLLDISGNGI 425
Query: 359 TNSGLGSFKPPRSLKLLDLH 378
+ G + LK LD+
Sbjct: 426 GDEGSKFIIGMKQLKSLDIQ 445
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 45/343 (13%)
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN---- 105
++ L+ LD+GG + D ++ + + +L LD+ G+ + ++G + +L+ LN
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKMKQLTSLNIYNN 183
Query: 106 -LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
+ G + + L L++S I G+E ++ E
Sbjct: 184 EIGVAGSKFIIEMKQLTSLDISYNEI-----GDEGAKSIS-------------------E 219
Query: 165 TSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
L+ L VS + + +++MK L LD+S + IGD V+ ++ + L +LN+ N
Sbjct: 220 LKQLTSLTVSGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKM-KQLTSLNIYN 278
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
AG + + L L +S +I D +S M L + IS Q+G
Sbjct: 279 NEIGVAGSKFII-EMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGN-------QIG 330
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
E + + + L L++ V D + +S K+L L++ + +
Sbjct: 331 DE-----GIKLISEMKQLTLLDISGKSVGDKGVKSISKMKQLTSLTIYTNEIGVAGAKFI 385
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
S + +LT+L I + + G S + L LLD+ G + E
Sbjct: 386 SEMKQLTSLDISYNEIGDEGAKSISELKQLTLLDISGNGIGDE 428
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 154 INEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
IN+ A IE L+ LD+ + + +++MK L LD+S + IGD V+ ++ +
Sbjct: 113 INDETAKSIIEMKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKGVKPISKM 172
Query: 212 GANLRNLNLSNTRFSSAGVGILA-----------------------GHLPNLEILSLSGT 248
L +LN+ N AG + L L L++SG
Sbjct: 173 -KQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVSGN 231
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
QI D I +S M L +DIS I KG + + + L LN+
Sbjct: 232 QIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPISKMKQLTSLNIY 277
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
++ A + K+L L + + D +S + +LT+L+I + + G+
Sbjct: 278 NNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISEMKQLTSLTISGNQIGDEGIKLI 337
Query: 367 KPPRSLKLLDLHG 379
+ L LLD+ G
Sbjct: 338 SEMKQLTLLDISG 350
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 42/205 (20%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S+ F+++MK L L++S++ I D++ + +
Sbjct: 90 SIENHKFISEMKQLTSLNISNNQINDETAKSII--------------------------E 123
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTAL 294
+ L L + G QI D I +S M L +DIS I KG + +
Sbjct: 124 MKRLTSLDIGGNQIGDEGIKLISEMKQLTLLDISGNSIGDKG--------------VKPI 169
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+ L LN+ ++ A + K+L L + + D +S L +LT+L++
Sbjct: 170 SKMKQLTSLNIYNNEIGVAGSKFIIEMKQLTSLDISYNEIGDEGAKSISELKQLTSLTVS 229
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHG 379
+ + G+ + L LLD+ G
Sbjct: 230 GNQIGDEGIKLISEMKQLTLLDISG 254
>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
23134]
Length = 577
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 167/350 (47%), Gaps = 46/350 (13%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 101
DGI L NL LDL +T L S L LEYLDL G+Q++ + ++ L
Sbjct: 82 DGIG---KLNNLGGLDLSHNQLTTLP-ESFGKLVNLEYLDLSGAQLTTFPESFSELV-NL 136
Query: 102 SFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
L L+ T + P + +L+ L LS+ + ++ + + L ++ L+ T I
Sbjct: 137 ERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLP 196
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
E+F + L +LD+S + L+ ++ LE+LDLS + + D V NL+
Sbjct: 197 ESFDKLVN--LEYLDLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELV--NLQ 252
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
+L LS+T+ + G L NL+ L LS TQ+ D S+ ++ +L+ + +SNT +
Sbjct: 253 DLYLSDTQLTDLPESF--GELVNLQRLYLSNTQLTDLPESFGELV-NLQDLYLSNTQL-- 307
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS---LRNAS 333
TDL S L N L+RLNL TQ+ T P +F EL++L L N
Sbjct: 308 --------TDLPESFDKLVN---LQRLNLSSTQL---TALP-ESFGELVNLQRLYLSNTQ 352
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL-KLLDLHGGWL 382
LT + S KL NL +D L+N L + P S KL++L +L
Sbjct: 353 LTALP----ESFDKLVNL--QDLYLSNIQLTAL--PESFDKLVNLQHLYL 394
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 178/377 (47%), Gaps = 44/377 (11%)
Query: 29 LEKLWLSETGLTADGIALLSS---LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
LE+L+LS T L I L S L NL LDL G +T L S L LEYLDL G+
Sbjct: 182 LERLYLSNTQL----ITLPESFDKLVNLEYLDLSGTQLTTLP-ESFDKLVNLEYLDLSGT 236
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKA 141
Q+++ + ++ L L L+ T +T LP + +L+ L LSN + + E
Sbjct: 237 QLTDLPESFGELV-NLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELV 295
Query: 142 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMI 200
L + L+ T + E+F + L L++S++ L+ ++ L+ L LS++ +
Sbjct: 296 NLQDLYLSNTQLTDLPESFDKLVN--LQRLNLSSTQLTALPESFGELVNLQRLYLSNTQL 353
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
V NL++L LSN + ++ L NL+ L LS TQ+ S+ +
Sbjct: 354 TALPESFDKLV--NLQDLYLSNIQLTALPESF--DKLVNLQHLYLSDTQLTALPESFDKL 409
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQ---------NLNHLERLNLEQTQV 310
+ +L+ + +S+T + + G +L L+L++ Q L +L+ LNL TQ+
Sbjct: 410 V-NLQHLYLSDTQLTALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQL 468
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGLG----S 365
T P +F EL++ L+N L++ L L S +L NL D L+N+ S
Sbjct: 469 ---TTLP-ESFGELVN--LQNLDLSNTQLTTLPKSFGELVNLQNLD--LSNTQFTTLPES 520
Query: 366 FKPPRSLKLLDLHGGWL 382
F +LK LDL L
Sbjct: 521 FDELVNLKTLDLSNNQL 537
>gi|290982059|ref|XP_002673748.1| predicted protein [Naegleria gruberi]
gi|284087334|gb|EFC41004.1| predicted protein [Naegleria gruberi]
Length = 370
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 11/278 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L++S C + HL+ + L L ++ + A+G + ++ L+ L +G +
Sbjct: 57 LTDLNVSCCY--IGLNLSHLILLKALTHLNITSNNIRAEGAKYIGEMKQLTKLSIGSNDI 114
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ + L +L YL++ + + GA + +L++LN+ + E
Sbjct: 115 GPEGAKYISGLEQLTYLNIRSNDIKKDGAKHISEMKQLTYLNVVGNHICDGGARFISEMK 174
Query: 124 NLSNCTI---DSILEGNENKAPLAKISL--AGTTFINEREAFLYIETSLLSFLDV--SNS 176
LSN ++ D EG + + L +S+ G INE+ A E L+ L + N
Sbjct: 175 QLSNLSVGYNDIGEEGAKYISELMNVSILDIGGNSINEKGAKFIGEMKQLTDLRIYCCNI 234
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ +++ + L HL +S++ IGD+ + + + L +L++ + G + G
Sbjct: 235 GVEGTQYISSLNQLTHLSISTNNIGDEGAKYIGQM-KQLTDLSIRENKIGIEGAKSI-GQ 292
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L NL L +SG +I D ++S M L +DIS+ +I
Sbjct: 293 LKNLLNLYISGNEIGDNGAQFISEMNQLTILDISSINI 330
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 139/359 (38%), Gaps = 68/359 (18%)
Query: 25 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG----GLPVTDLVLRSLQVLTKLEYL 80
S+ L+KL L + +GI L SL+ L+ L++ GL ++ L+L L L +L
Sbjct: 29 SMKELKKLNLEYNNIDPNGIKYLGSLKQLTDLNVSCCYIGLNLSHLIL-----LKALTHL 83
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNE 138
++ + + GA + +L+ L++ G IS LE L N + I +
Sbjct: 84 NITSNNIRAEGAKYIGEMKQLTKLSIGSNDIGPEGAKYISGLEQLTYLNIRSNDIKK--- 140
Query: 139 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 198
G I+E + Y+ D +RF +++MK L +L + +
Sbjct: 141 ----------DGAKHISEMKQLTYLNVVGNHICDGG----ARF--ISEMKQLSNLSVGYN 184
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
IG++ + ++ L N+ IL + G I++ ++
Sbjct: 185 DIGEEGAKYIS--------------------------ELMNVSILDIGGNSINEKGAKFI 218
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
M L TD++ + +G E +S +LN L L++ + D +
Sbjct: 219 GEMKQL-------TDLRIYCCNIGVEGTQYIS-----SLNQLTHLSISTNNIGDEGAKYI 266
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
K+L LS+R + + L L NL I + ++G L +LD+
Sbjct: 267 GQMKQLTDLSIRENKIGIEGAKSIGQLKNLLNLYISGNEIGDNGAQFISEMNQLTILDI 325
>gi|46447300|ref|YP_008665.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400941|emb|CAF24390.1| hypothetical protein pc1666 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 518
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 34/279 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGG-L 61
LK L L C +TDAG+ HL + TL+ L LS + LT G+A L+SL L LDL
Sbjct: 211 LKVLYLQECHNLTDAGLSHLAPLVTLQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCY 270
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L L L++L+L + S++++ G A L L L+L W G+ L
Sbjct: 271 NLTDAGLTHLTPLAALQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAHL 330
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+++L+ LNLS C K++ G + A +++ L ++++
Sbjct: 331 TPLAALQHLNLSYCI---------------KLTDVGLAHLTSLVALQHLD--LTWCVNLT 373
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGI 232
L+ LT + L+HL+LS + D + + + A L++LNLS + + G+
Sbjct: 374 EVGLAH---LTPLVTLQHLELSKCHNLTDAGLAHLTSLVA-LQHLNLSICKKITDVGLAH 429
Query: 233 LAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS 270
L L L+ L LSG ++ D +++++ + +L+ +D++
Sbjct: 430 LTP-LVALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLT 467
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 46/278 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
L+ L+LS C K+TDAG+ HL S+ TL+ L LS+ LT G+ L+ L L L+L
Sbjct: 236 LQHLNLSYCSKLTDAGLAHLTSLVTLQHLDLSKCYNLTDAGLTHLTPLAALQHLNLSYCS 295
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L L L++LDL W +++ G A L L LNL++ G+ L
Sbjct: 296 KLTDAGLAHLTSLVTLQHLDLTWCVNLTDVGLAHLTPLAALQHLNLSYCIKLTDVGLAHL 355
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDV 173
++ +L+ L+L+ C ++ G + PL + L + N +A L TSL++ +
Sbjct: 356 TSLVALQHLDLTWC-VNLTEVGLAHLTPLVTLQHLELSKCHNLTDAGLAHLTSLVALQHL 414
Query: 174 SNSSLSR-----FCFLTQMKALEHLDLS-------------SSMIGDDSVEMVACVGAN- 214
+ S + LT + AL+HLDLS ++++ +++ CV
Sbjct: 415 NLSICKKITDVGLAHLTPLVALQHLDLSGCDKLTDVGLAHLTTLVALQHLDLTCCVNLTD 474
Query: 215 -----------LRNLNLSN-TRFSSAGVGILAGHLPNL 240
L++LNLS T + AG+ H NL
Sbjct: 475 AGLVHLKPLMALQHLNLSYCTNLTDAGL----AHFKNL 508
>gi|46447199|ref|YP_008564.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400840|emb|CAF24289.1| hypothetical protein pc1565 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1143
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 100/214 (46%), Gaps = 31/214 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T LK LDL C K+TD+G+ HL + L+ L L+ LT G++ LS L L LDLG
Sbjct: 338 LTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLG 397
Query: 60 -GLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------GV 111
+T L L L L+YLDL ++++RG A L L LNL G+
Sbjct: 398 LCKKLTSSGLAHLSPLVALQYLDLDRCGEITDRGLAHLSRLVALQHLNLNCCACLTDDGL 457
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSF 170
L + +L LNL C GN A LA ++ L ++N LS+
Sbjct: 458 AYLSPLVALRHLNLRCC-------GNLTSAGLAHLTPLIALQYLN------------LSY 498
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 204
D N + LT++ +L+HLDLS DS
Sbjct: 499 CDSLNDN--GLTHLTRLASLKHLDLSECPYFTDS 530
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 149/307 (48%), Gaps = 59/307 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLG 59
+ L+ LDL C K+TD+G+ +L + L+ L L+ LT DG+A LS L L LDLG
Sbjct: 238 LVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCCVCLTDDGLAYLSHLVALQHLDLG 297
Query: 60 GL--------------------------PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGA 92
+TD L L LT L++LDL +++++ G
Sbjct: 298 ECYKITDSGLAHLSSLLALQHLNLGCCNNLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGL 357
Query: 93 AVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
A L + L +LNL G++ L ++ +L+ L+L C K+
Sbjct: 358 AHLSLLVNLQYLNLNRCYNLTDRGLSHLSHLVALQYLDLGLC---------------KKL 402
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSV 205
+ +G ++ A Y++ ++++ L+ L+++ AL+HL+L+ + + DD +
Sbjct: 403 TSSGLAHLSPLVALQYLDLDRCG--EITDRGLAH---LSRLVALQHLNLNCCACLTDDGL 457
Query: 206 EMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPS 263
++ + A LR+LNL +SAG+ L L L+ L+LS ++D +++++ + S
Sbjct: 458 AYLSPLVA-LRHLNLRCCGNLTSAGLAHLTP-LIALQYLNLSYCDSLNDNGLTHLTRLAS 515
Query: 264 LKFIDIS 270
LK +D+S
Sbjct: 516 LKHLDLS 522
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 153/314 (48%), Gaps = 48/314 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ LDL C K+TD+G+ HL + L+ L L +T G+ LS L L L+L
Sbjct: 803 LVALQHLDLGGCYKITDSGLAHLSRLVALQHLDLGGCYEITDSGLTYLSRLVALQHLNLN 862
Query: 60 -GLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
+ +TD L L L L+YLDL W ++++RG A L L LNL +
Sbjct: 863 RCVCLTDDGLAYLSHLVALQYLDLDRCW--KITDRGLAHLSSLLALQHLNLGCCNNLTDS 920
Query: 110 GVTKLPNISSLECLNLSNCT--IDSILE----------------GNENKAPLAKIS-LAG 150
G+ L +++SL+ L+L +C DS L N LA +S L
Sbjct: 921 GLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCNNLTDRGLAHLSHLVA 980
Query: 151 TTFINEREAFLYIETSL--------LSFLDVS---NSSLSRFCFLTQMKALEHLDLSSSM 199
++ E + ++ L L +L+++ N + L+++ L+HL+L+ +
Sbjct: 981 LQHLDLGECYKITDSGLAHLSLLVNLQYLNLNRCDNLTDRGLAHLSRLVTLQHLNLNCCV 1040
Query: 200 -IGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAIS 256
+ DD + ++ + A LR+LNL S +SAG+ L L L+ L+LS ++D ++
Sbjct: 1041 CLTDDGLAYLSPLVA-LRHLNLRSCDNLTSAGLAHLTP-LIALQYLNLSYCDSLNDNGLT 1098
Query: 257 YMSMMPSLKFIDIS 270
+++ + SLK +D+S
Sbjct: 1099 HLTRLASLKHLDLS 1112
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 21/237 (8%)
Query: 162 YIETSLLSFLDVSNSSLSRF-----CFLTQMKA-LEHLDLSSSMIGDDSVEMVACVGANL 215
Y+E + +S L S L+ F F +++ +E LD S++ D+ + NL
Sbjct: 157 YLECAAVSVLLNQISELTEFEEFLNLFSNEIEGGIESLDFSNNAYLTDAHLLALKDCKNL 216
Query: 216 RNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTD 273
+ L L R F+ AG+ L+ L L+ L L G +I D ++Y+S + +L+ ++++
Sbjct: 217 KVLRLHECRNFTDAGLAHLS-RLVALQHLDLGGCYKITDSGLTYLSRLVALQHLNLNCC- 274
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
V D + L+ L L HL+ E +++D+ L LS+ L HL+L +
Sbjct: 275 -------VCLTDDGLAYLSHLVALQHLDLG--ECYKITDSGLAHLSSLLALQHLNLGCCN 325
Query: 334 -LTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LTD L LS L+ L +L +RD A LT+SGL +L+ L+L+ + LT+ +
Sbjct: 326 NLTDSGLAHLSHLTSLKHLDLRDCAKLTDSGLAHLSLLVNLQYLNLNRCYNLTDRGL 382
>gi|242078575|ref|XP_002444056.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
gi|241940406|gb|EES13551.1| hypothetical protein SORBIDRAFT_07g006470 [Sorghum bicolor]
Length = 1010
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 181/427 (42%), Gaps = 62/427 (14%)
Query: 23 LLSISTLEKLWLSETGLTADGIAL---LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ LE + LS LT + L S++N+ L+L G+P T V L L+ L+Y
Sbjct: 105 LLSLEYLEHMDLSSNSLTGPHGCIPQFLGSMKNMKYLNLSGIPFTGGVAPQLGNLSNLQY 164
Query: 80 LDLWGSQVSNRGAAV--LKMFPRLSFLNLAW---TGVTKLPN----ISSLECLNLSNCTI 130
LDL G Q A + L P L +L++++ +G+ P + SL + L++C++
Sbjct: 165 LDL-GRQYYLYSADITWLTNLPLLQYLDMSYVNLSGIADWPQKLNMVPSLRVIRLTSCSL 223
Query: 131 DSILE--GNENKAPLAKISLAGTTFINE-REAFLYIETSLLSFLDVSNSSLSRFC--FLT 185
D+ + + N L K+ L+ F + ++ + + + L +L++ N L L
Sbjct: 224 DTTNQSLSHFNLTNLEKLDLSLNNFNHPIVSSWWFWKPTGLKYLNLHNIGLIGHLQDSLE 283
Query: 186 QMKALEHLDLSS------SMIGDDS----VEMVACVG--ANLRNLNLSNTRFSSAGVGIL 233
M L LDLS+ ++ G S EM+ + +L L+LS + S + I
Sbjct: 284 NMTLLRVLDLSNNYQNCLALTGSPSNLCTFEMIGNLNNLCSLEILDLS-YNYMSGDMTIF 342
Query: 234 AGHLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
G LP L+ L+L + + + SL + ISN ++ G I
Sbjct: 343 TGRLPQCSWDKLQHLNLDSNNLTGTLPNLIGHFISLSVLVISNNNLTGTIP--------- 393
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
L N HL L+L ++S + + + +L L LRN +L+ Q+ S L
Sbjct: 394 ---AGLGNCTHLTILDLYCNKISGSVPTEIGSLSKLTSLDLRNNNLSGGVPTQIGGCSNL 450
Query: 349 TNLSIRDAVLTNSGLGS-FKPPRSLKLLDLHGG----------WLLT---EDAILQFCKM 394
T L + + L+ + F+ SLK LDL W E C+M
Sbjct: 451 TFLDVSNNYLSGVIMEEHFEGLISLKKLDLSSNKNLKVTVNRDWFPPFRLEYGNFANCQM 510
Query: 395 HPRIEVW 401
P W
Sbjct: 511 APLFPAW 517
>gi|290996041|ref|XP_002680591.1| predicted protein [Naegleria gruberi]
gi|284094212|gb|EFC47847.1| predicted protein [Naegleria gruberi]
Length = 281
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 19/258 (7%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
+ HL + L+KL + ++ + +G+ +S L+ L+ LD+ +++ + L L +L +
Sbjct: 17 LNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLTF 76
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L + + + +G+ + +L+ L N+ G L + L LN+ + I
Sbjct: 77 LIIDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRI---- 132
Query: 135 EGNENKAPLAKISLAGTTFINE----REAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQM 187
G+E + ++ +IN E Y+ E L L++SN+ + +L ++
Sbjct: 133 -GDEGSKYIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCEL 191
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K L LD+S + IGD+ ++ ++ + L +L++S + GV ++ L + L ++
Sbjct: 192 KQLMDLDISCNDIGDEGIKYLSGL-KQLTHLDISYNKIRDEGVKYIS-ELKEIMYLYINN 249
Query: 248 TQIDDYAISYMSMMPSLK 265
I D Y+S M LK
Sbjct: 250 NYIGDEGTKYLSEMNQLK 267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 234
L+++K L+ L + S IGD+ V ++ + L L++ N S G L+
Sbjct: 20 LSELKQLKKLHIYDSYIGDEGVRFISEL-KQLTTLDIRNNGISEYGAKYLSELKQLTFLI 78
Query: 235 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KG 276
L L IL + IDD Y+S + L +++I + I
Sbjct: 79 IDKNNIGAKGSKYISELKQLTILIIDKNNIDDEGAKYLSELKQLTYLNIQDNRIGDEGSK 138
Query: 277 FIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
+I ++ TDL ++ + N L HL LN+ Q+ D L K+L+ L
Sbjct: 139 YIGELKQLTDLYINNNQIGNEGAKYLSELKHLILLNISNNQIGDEGAKYLCELKQLMDLD 198
Query: 329 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+ + D + LS L +LT+L I + + G+ + + L ++ ++ E
Sbjct: 199 ISCNDIGDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDE 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 120/307 (39%), Gaps = 55/307 (17%)
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 126
L L L +L+ L ++ S + + G + +L+ L++ G+++ E L+
Sbjct: 16 ALNHLSELKQLKKLHIYDSYIGDEGVRFISELKQLTTLDIRNNGISEYGAKYLSELKQLT 75
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
ID I G+ +I+E ++ + +D +N +L++
Sbjct: 76 FLIIDK-----------NNIGAKGSKYISE------LKQLTILIIDKNNIDDEGAKYLSE 118
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
+K L +L++ + IGD+ + + + L +L ++N + + G L+ L +L +L++S
Sbjct: 119 LKQLTYLNIQDNRIGDEGSKYIGEL-KQLTDLYINNNQIGNEGAKYLS-ELKHLILLNIS 176
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
QI D Y+ + L +DIS DI
Sbjct: 177 NNQIGDEGAKYLCELKQLMDLDISCNDI-------------------------------- 204
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
D + LS K+L HL + + D + +S L ++ L I + + + G
Sbjct: 205 ----GDEGIKYLSGLKQLTHLDISYNKIRDEGVKYISELKEIMYLYINNNYIGDEGTKYL 260
Query: 367 KPPRSLK 373
LK
Sbjct: 261 SEMNQLK 267
>gi|18413537|emb|CAD21866.1| hypothetical leucine-rich repeat protein 1 (LRRP1) [Trypanosoma
brucei]
Length = 1393
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 65/369 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L EL+LS C + +AG + + + L LS T +T I+ S+ +NL LDL
Sbjct: 556 LNELNLSNCFGI-NAGWEAIEKLQQLHVAILSNTHITDRDISHFSNCKNLITLDLS-FCN 613
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-----VTKLPNIS 118
L + +L +T LE L+L +G +VL PRL LN+ + L N +
Sbjct: 614 KLLDVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGN 673
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
S L+L NC +G + APL+ + + +E L + D S +
Sbjct: 674 SFVRLSLENC------KGFGDVAPLSNL--------------VTLEELNLHYCDKVTSGM 713
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA---- 234
L Q++ L DL + + D+S+E + + L +LNLSN + ++ I +
Sbjct: 714 GTLGRLLQLRVL---DLGRTQVDDNSLENICTCSSPLVSLNLSNCKKITSISAIASLTAL 770
Query: 235 ------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
G L L + +LS T+ +D I ++S SL ++++
Sbjct: 771 EELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRTNDENIRHVSECKSLNTLNLA------ 824
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
F + + TD +TAL + LE LNL+ + L T + LS++ + D
Sbjct: 825 FCKDI---TD----VTALSKITMLEELNLDCCHNIRKGIETLGTLPKARILSMKECYMGD 877
Query: 337 VSLHQLSSL 345
Q S L
Sbjct: 878 GYAQQCSIL 886
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 191/446 (42%), Gaps = 89/446 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C +TDA + +S LE+L LS +T GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLSALEELNLSNCHITK-GIGTLGMLLRLRILDLSGVPV 306
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 307 EDNCLKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPK 366
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 367 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 408
Query: 161 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 196
I T L L++ + +S F + K+L L++
Sbjct: 409 SSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 467
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
S+ G +VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 468 ESITGLSNVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 525
Query: 257 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 304
+ + ++ +++S+ T++ I + A +L LS A++ L L
Sbjct: 526 SLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAI 584
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L T ++D + S K LI L L + L DV+ LS+++ L L++ GL
Sbjct: 585 LSNTHITDRDISHFSNCKNLITLDLSFCNKLLDVT--ALSNITTLEELNLDSCSNIRKGL 642
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 643 SVLGELPRLCVLNIKGVQL--EDSVI 666
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 155/376 (41%), Gaps = 71/376 (18%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
+HL +I TLE+L +++T + I +S L NL L+L + D +R + KL L
Sbjct: 195 RHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCLELNSTNIDDSCVRRICACVKLSKL 253
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 140
+ S+ +N T T + +S+LE LNLSNC I
Sbjct: 254 SV--SECNN------------------ITDATPISQLSALEELNLSNCHI---------- 283
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
T I L + LS + V ++ L C +LE L++S +
Sbjct: 284 ----------TKGIGTLGMLLRLRILDLSGVPVEDNCLKDLC---DCGSLERLNISYRIQ 330
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
D + + LNL+ R + G+G++ LP L +L + + + ++ +
Sbjct: 331 LTDINPLSN--ATAIEELNLNGCRRITRGIGVVWA-LPKLRVLHMKDVHLSEPSLDSVGT 387
Query: 261 MPSLKFIDISNTDIKGF----------------IQQVGAETDLVLSLTALQNLNHLERLN 304
L + +S + GF IQ+ D++ + L L +L LN
Sbjct: 388 GGPL--VKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---DIISGVGCLGTLPYLRVLN 442
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGL 363
+++ +S + K L+ L++ S+T +S + L+++ L LS+ ++G+
Sbjct: 443 IKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEALANILTLEKLSLHGCTGIDAGI 500
Query: 364 GSFKPPRSLKLLDLHG 379
G LK+LDL G
Sbjct: 501 GCLGNLPQLKMLDLSG 516
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 170/413 (41%), Gaps = 63/413 (15%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA---DGIALLSSLQNLSVLDL 58
T ++EL+L+ C ++T G+ + ++ L L + + L+ D + L +S+ +
Sbjct: 341 TAIEELNLNGCRRIT-RGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNC 399
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TK 113
G D+ L L + LE L++ G L P L LN+ + T
Sbjct: 400 AGFG--DMTL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTG 455
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL----YIETSLLS 169
+ SL LN+ + T S +E N L K+SL G T I+ L ++ LS
Sbjct: 456 IGASKSLLQLNMESITGLSNVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLS 515
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+ N SL C L+Q +L M +V ++ + A L LNLSN +AG
Sbjct: 516 GTNTDNESLRSLC-LSQTVVSLNLSHCWKMT---NVSHISSLEA-LNELNLSNCFGINAG 570
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
+ L L + LS T I D IS+ S +L +D+S F ++ L
Sbjct: 571 WEAIE-KLQQLHVAILSNTHITDRDISHFSNCKNLITLDLS------FCNKL-------L 616
Query: 290 SLTALQNLNHLERLNLEQ------------------------TQVSDATLFPLSTFKELI 325
+TAL N+ LE LNL+ Q+ D+ + L +
Sbjct: 617 DVTALSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGNSFV 676
Query: 326 HLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
LSL N DV+ LS+L L L++ SG+G+ L++LDL
Sbjct: 677 RLSLENCKGFGDVA--PLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 727
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 179/442 (40%), Gaps = 77/442 (17%)
Query: 1 MTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 56
+T L+EL++ C VT G H L ++TL S T + I +S ++L+ L
Sbjct: 767 LTALEELNIDNCCNVTSGWNVFGTLHQLRVATL-----SNTRTNDENIRHVSECKSLNTL 821
Query: 57 DLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--AWTG--- 110
+L +TD+ +L +T LE L+L +G L P+ L++ + G
Sbjct: 822 NLAFCKDITDVT--ALSKITMLEELNLDCCHNIRKGIETLGTLPKARILSMKECYMGDGY 879
Query: 111 ---VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL---AGTTFINEREAFLYIE 164
+ L N SL LNL ++ N A L ++ L I +
Sbjct: 880 AQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEELVLDHARKVCCIPSFSCLPRLR 939
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
L + D+ N +++ +++ K+L L+LS D + + + N+N N
Sbjct: 940 VLNLKYTDI-NGDVTKN--ISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCN-- 994
Query: 225 FSSAGVGILAG-----HLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI---DISNTD 273
GI G LP L + LS T+I D +S + LKF +S+
Sbjct: 995 ------GIRKGWESLGKLPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFRCKKLSDVT 1048
Query: 274 IKGFIQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
+ IQ V + +D + L AL L L +L + SD ++ + T K L+ L
Sbjct: 1049 VVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLH 1108
Query: 329 LR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF-KPPR---------------- 370
+ LTD++ LS+++ L LS+RD G+G+ K PR
Sbjct: 1109 IEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGTLGKLPRLKSLDLGLSRISDSTL 1166
Query: 371 -------SLKLLDLHGGWLLTE 385
S+ L+L W LT+
Sbjct: 1167 YCICLSRSITSLNLDSSWKLTD 1188
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 166/425 (39%), Gaps = 58/425 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L+LS C K+T + + S++ LE+L + G + +L L V L
Sbjct: 747 LVSLNLSNCKKIT--SISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRT 804
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D +R + L L+L A K T VT L I+ LE L
Sbjct: 805 NDENIRHVSECKSLNTLNL----------AFCKDI----------TDVTALSKITMLEEL 844
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
NL C +I +G E L K ++ +E ++ + +
Sbjct: 845 NLDCC--HNIRKGIETLGTLPK-----ARILSMKECYM------------GDGYAQQCSI 885
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L K+L L+L S G SV+ ++ V A L L L + R LP L +L
Sbjct: 886 LGNSKSLVKLNLERSR-GRISVKALSNV-ATLEELVLDHARKVCCIPSFSC--LPRLRVL 941
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISN----TDIK-------GFIQQVGAETDLVLSLT 292
+L T I+ +S SL+ +++S+ TDI V +
Sbjct: 942 NLKYTDINGDVTKNISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCNGIRKGWE 1001
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSL-HQLSSLSKLTN 350
+L L L L T+++ + LS+ K+L+ L R L+DV++ +++ SL +L
Sbjct: 1002 SLGKLPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIV 1061
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPS 410
S D + + LG+ R L ++ G + E + IEV EL+ I P
Sbjct: 1062 TSCSDGLKGLNALGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLHIEVGEELTDITPL 1121
Query: 411 DQIGS 415
I S
Sbjct: 1122 SNITS 1126
>gi|301118238|ref|XP_002906847.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108196|gb|EEY66248.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 648
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 165/375 (44%), Gaps = 38/375 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L L+LS C ++TD G+ L ++ L L ++ G +T G L+ L NL LD+
Sbjct: 269 VTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVA 328
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG------- 110
G +TD L KL +LW S++ + ++ ++ FLN G
Sbjct: 329 GCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGL 388
Query: 111 --VTKLPNISSLE---CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
+ KL N++SL+ C N+++ ++ + + N L + L G + I +
Sbjct: 389 RSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNR----LKSLYLGGCSGIRDEGIAALSHL 444
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLD----LSSSMIGDDSVEMVACVGANLRNLNLS 221
S L LD+SN L + AL +L + + I DD + +A + L+ LNL+
Sbjct: 445 SSLVILDLSNCRQVGNKALLGIGALRNLTNLNLMRCNRIDDDGIAHLAGL-TRLKTLNLA 503
Query: 222 NTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
N R + + LE L L ++ D I +S + L+ ID++
Sbjct: 504 NCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILNLSTLTKLQSIDLA---------S 554
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS-LTDVS 338
TD SL A N+ +L L+L +SD + LS L L+L +TD
Sbjct: 555 CSKLTD--ASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSLNLSECGEITDTG 612
Query: 339 LHQLSSLSKLTNLSI 353
L L +L L+++++
Sbjct: 613 LEHLKTLVNLSSVNL 627
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 205/470 (43%), Gaps = 96/470 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQN--LSVLDLGG 60
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q+ L+ ++LG
Sbjct: 142 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 201
Query: 61 LPV-TDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 109
V +D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 202 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 261
Query: 110 GVTKLPNISSLECLNLSNCT--------------------IDSILEGNENK----APLAK 145
G++ L ++SL LNLSNC+ I ++ E + APL
Sbjct: 262 GISALAEVTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVN 321
Query: 146 ---ISLAGTTFINEREAFLYIE------TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
+ +AG I + + + +L ++ +++ LT+M+ L +
Sbjct: 322 LVTLDVAGCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCG 381
Query: 197 SSMIGDDSVEMVACVGANLRNLN----LSNTRFSSAGVGILAGHLPNLEILSLSG-TQID 251
+ D + + A LRNL +S + G+ L+ L L+ L L G + I
Sbjct: 382 K--VTDRGLRSI----AKLRNLTSLDMVSCFNVTDEGLNELS-KLNRLKSLYLGGCSGIR 434
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D I+ +S + SL +D+SN +QVG + +L + AL+NL +L + ++
Sbjct: 435 DEGIAALSHLSSLVILDLSN------CRQVGNKA--LLGIGALRNLTNLNLMRCN--RID 484
Query: 312 DATLFPLSTFKELIHLSLRNA--------------------------SLTDVSLHQLSSL 345
D + L+ L L+L N LTD + LS+L
Sbjct: 485 DDGIAHLAGLTRLKTLNLANCRLLTDRATKTVAQMTGLESLVLWYCNKLTDAGILNLSTL 544
Query: 346 SKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
+KL ++ + + LT++ L +F +L LDL LL+++ +L K+
Sbjct: 545 TKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKV 594
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG 59
+T L+ +DL+ C K+TDA ++ L++ L L L L +D G+ LS + +L+ L+L
Sbjct: 544 LTKLQSIDLASCSKLTDASLEAFLNMPNLTSLDLGNCCLLSDEGMLTLSKVTSLTSLNLS 603
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLW 83
+TD L L+ L L ++LW
Sbjct: 604 ECGEITDTGLEHLKTLVNLSSVNLW 628
>gi|46446626|ref|YP_007991.1| hypothetical protein pc0992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400267|emb|CAF23716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 583
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 164/375 (43%), Gaps = 67/375 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
LK L L C+ +TD G+ HL + L+ L LS+ LT G+A L+ L L LDL G
Sbjct: 253 LKVLHLEACLAITDDGLAHLAPLVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCY 312
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
TD L L LT L++L+L + S ++ G A L L L+L G+ L
Sbjct: 313 FTDAGLAHLTPLTALQHLNLSFCSNATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTP 372
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
++ L+ L+L C ++ AG + A ++ + +++++
Sbjct: 373 LTGLQHLDLIGC---------------KDLTDAGLAHLRPLTALQHLNLNWCR--NLTDA 415
Query: 177 SLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L+ LT + AL+HLDLS S I DD + + + + + AG+ L
Sbjct: 416 GLAH---LTPLTALQHLDLSFCSNITDDGLAHLTLLTTLQHLNLSGCYKLTDAGLAHLTL 472
Query: 236 HLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
L L+ L+L+ + + D +++++ + L++ L+LT
Sbjct: 473 -LTGLQHLNLNWYKNLTDAGLAHLTPLAGLQY----------------------LALTDC 509
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 353
+NL +DA L L+ L HL+L LTD L L+SL+ L L +
Sbjct: 510 KNL-------------TDAGLAHLTPLTALQHLNLSGCYKLTDAGLAHLTSLTALQYLDL 556
Query: 354 RDAV-LTNSGLGSFK 367
+ LT+ GL FK
Sbjct: 557 SYCMNLTDDGLDRFK 571
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 32/161 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-----WLSETGL---------------- 39
+ L+ LDLS C +TD G+ HL ++ L+ L + ++ GL
Sbjct: 275 LVALQHLDLSDCENLTDVGLAHLTPLTALQHLDLRGCYFTDAGLAHLTPLTALQHLNLSF 334
Query: 40 ----TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAV 94
T G+A L+ L L LDL G +TD L L LT L++LDL G + +++ G A
Sbjct: 335 CSNATDAGLAHLTPLTALQHLDLRGCYLTDAGLAHLTPLTGLQHLDLIGCKDLTDAGLAH 394
Query: 95 LKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCT 129
L+ L LNL W G+ L +++L+ L+LS C+
Sbjct: 395 LRPLTALQHLNLNWCRNLTDAGLAHLTPLTALQHLDLSFCS 435
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 190/399 (47%), Gaps = 67/399 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWL----SETGLTADGIALLSSLQNLSVLDLG 59
++ LD S +TDA HLL++ E L + + +T DG+A L+ L L LDL
Sbjct: 228 IEALDFSNNAHLTDA---HLLALKNCENLKVLHLEACLAITDDGLAHLAPLVALQHLDLS 284
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
+TD+ L L LT L++LDL G ++ G+ L ++
Sbjct: 285 DCENLTDVGLAHLTPLTALQHLDLRGCYFTD-------------------AGLAHLTPLT 325
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+L+ LNLS C+ N A LA ++ L ++ R +L +++
Sbjct: 326 ALQHLNLSFCS-------NATDAGLAHLTPLTALQHLDLRGCYL------------TDAG 366
Query: 178 LSRFCFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAG 235
L+ LT + L+HLDL + D + + + A L++LNL+ R + AG+ L
Sbjct: 367 LAH---LTPLTGLQHLDLIGCKDLTDAGLAHLRPLTA-LQHLNLNWCRNLTDAGLAHLTP 422
Query: 236 HLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
L L+ L LS + I D +++++++ +L+ +++S G + A + LT L
Sbjct: 423 -LTALQHLDLSFCSNITDDGLAHLTLLTTLQHLNLS-----GCYKLTDAGLAHLTLLTGL 476
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 353
Q+LN LN + ++DA L L+ L +L+L + +LTD L L+ L+ L +L++
Sbjct: 477 QHLN----LNWYK-NLTDAGLAHLTPLAGLQYLALTDCKNLTDAGLAHLTPLTALQHLNL 531
Query: 354 RDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
LT++GL +L+ LDL LT+D + +F
Sbjct: 532 SGCYKLTDAGLAHLTSLTALQYLDLSYCMNLTDDGLDRF 570
>gi|290993162|ref|XP_002679202.1| predicted protein [Naegleria gruberi]
gi|284092818|gb|EFC46458.1| predicted protein [Naegleria gruberi]
Length = 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+++++K L L + + I D+ VE ++ + A L LN+SN S G + G + L
Sbjct: 88 YISELKQLTSLSIDENFIYDEGVEYLSEL-AQLTYLNISNNGVGSEGCKYV-GKMKRLTS 145
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDLVLSLTALQN-- 296
L +I Y+S + LK +DIS T+I KG I Q+ T L L + N
Sbjct: 146 LGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQLSQLTSLDLYCNKIGNGG 205
Query: 297 ------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L LN+ + + + + + K+L++L + N + + + + L +LT
Sbjct: 206 AKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINNNRIGNDGVKYIGELKQLTY 265
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
L+I + + N G+ + L + + W+ +E A
Sbjct: 266 LNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGA 302
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 43/260 (16%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V G K++ + L L + +G +S+L L LD+ + D L + L
Sbjct: 129 VGSEGCKYVGKMKRLTSLGFYNNRIGKEGAKYISTLNQLKQLDISRTNIGDKGLEHIGQL 188
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
++L LDL+ +++ N GA L +L++LN++ +
Sbjct: 189 SQLTSLDLYCNKIGNGGAKYLSELKQLTYLNISENHI----------------------- 225
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
GNE G +I E + + + +++ + N + ++ ++K L +L+
Sbjct: 226 -GNE-----------GIKYIGELKQLVNL---IINNNRIGNDGVK---YIGELKQLTYLN 267
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
+S + IG++ ++ + + L N+ +S S G + G L L L LS ID+
Sbjct: 268 ISENRIGNEGIKYIGDL-KQLTNIIISRNWIGSEGAKYI-GKLSQLTSLGLSSNNIDNEG 325
Query: 255 ISYMSMMPSLKFIDISNTDI 274
Y+S + L F++I I
Sbjct: 326 AKYLSELKELSFLNIERNKI 345
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 153/344 (44%), Gaps = 32/344 (9%)
Query: 62 PVTDLVLRS-------LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 114
+T+L++R + L +L L ++ S + R + +L++LN+ G+
Sbjct: 3 SLTELIIRCDEQDAKYIGGLKQLTRLTIYSSHI--RDIGKISELKQLTYLNVPANGIWCY 60
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER----EAFLYI-ETSLLS 169
E L+ ID G+E ++++ + I+E E Y+ E + L+
Sbjct: 61 TTKQVKEFKQLTTLIIDQNQVGSEGCKYISELKQLTSLSIDENFIYDEGVEYLSELAQLT 120
Query: 170 FLDVSNSSL-SRFC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+L++SN+ + S C ++ +MK L L ++ IG + + ++ + L+ L++S T
Sbjct: 121 YLNISNNGVGSEGCKYVGKMKRLTSLGFYNNRIGKEGAKYISTLNQ-LKQLDISRTNIGD 179
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-----NTDIKGFIQQVG 282
G+ + G L L L L +I + Y+S + L +++IS N IK +I ++
Sbjct: 180 KGLEHI-GQLSQLTSLDLYCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIK-YIGELK 237
Query: 283 AETDLVLSLTALQN--------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+L+++ + N L L LN+ + ++ + + + K+L ++ + +
Sbjct: 238 QLVNLIINNNRIGNDGVKYIGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWI 297
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+ LS+LT+L + + N G + L L++
Sbjct: 298 GSEGAKYIGKLSQLTSLGLSSNNIDNEGAKYLSELKELSFLNIE 341
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L LDL C K+ + G K+L + L L +SE + +GI + L+ L L +
Sbjct: 188 LSQLTSLDL-YCNKIGNGGAKYLSELKQLTYLNISENHIGNEGIKYIGELKQLVNLIINN 246
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS--FLNLAW---TGVTKLP 115
+ + ++ + L +L YL++ +++ N G + +L+ ++ W G +
Sbjct: 247 NRIGNDGVKYIGELKQLTYLNISENRIGNEGIKYIGDLKQLTNIIISRNWIGSEGAKYIG 306
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISL 148
+S L L LS+ ID+ EG + + L ++S
Sbjct: 307 KLSQLTSLGLSSNNIDN--EGAKYLSELKELSF 337
>gi|46447562|ref|YP_008927.1| hypothetical protein pc1928 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401203|emb|CAF24652.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 40/284 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C +TD G+ HL ++ L+ L LS+ T DG+A L+SL L L L
Sbjct: 243 LTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALM 302
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
G + D L L+ LT L++L+L G +++ G A L L LNL+ G+
Sbjct: 303 GCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGL 362
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L + +L+ LNL NC L LA T + L L
Sbjct: 363 AHLRLLVALQYLNLDNC------------RKLTDDGLAHLTPVTN-----------LQHL 399
Query: 172 DVSNS---SLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFS 226
D+S + LT +K+L+HLDLS + DD + + + A L++L+LS +
Sbjct: 400 DLSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTA-LQHLDLSYCYNLT 458
Query: 227 SAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDI 269
G+ L L L+ L L G + + D +++++ + +L+++D+
Sbjct: 459 DDGLAHLTP-LTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDL 501
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
L+ LDLSRC +TD G+ HL ++ L+ L LS LT DG+A L+ L L LDL G
Sbjct: 421 LQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK 480
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLK 96
+TD L L L L+YLDL G + ++ G A K
Sbjct: 481 NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFK 516
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 166/378 (43%), Gaps = 73/378 (19%)
Query: 29 LEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPV-TDLVLRSLQVLTKLEYLDLWGS- 85
++KL SE T LT ++L +NL L + TD L L+ LT L++L+L G
Sbjct: 196 IKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHLKPLTALQHLNLSGCY 255
Query: 86 QVSNRGAAVLKMFPRLSFLNLA--W----TGVTKLPNISSLECLNLSNCT--IDSILEGN 137
+++ G A L L L+L+ W G+ L ++++L+ L L C ID+ L
Sbjct: 256 HLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHL 315
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
+ L ++L G ++ + + L + L+HL+LS
Sbjct: 316 KPLTSLQHLNLRGCGYLTD----------------------AGLAHLAPLTGLQHLNLSK 353
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAIS 256
NL ++ L++ R A L+ L+L ++ D ++
Sbjct: 354 C--------------ENLTDVGLAHLRLLVA-----------LQYLNLDNCRKLTDDGLA 388
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATL 315
+++ + +L+ +D+S Q TD+ L+ LT L++L HL+ E ++D L
Sbjct: 389 HLTPVTNLQHLDLS---------QCWHLTDIGLAHLTPLKSLQHLDLSRCEN--LTDDGL 437
Query: 316 FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLK 373
L+ L HL L +LTD L L+ L+ L +L + LT+ GL P +L+
Sbjct: 438 VHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQ 497
Query: 374 LLDLHGGWLLTEDAILQF 391
LDL G T+D + +F
Sbjct: 498 YLDLIGCKNFTDDGLARF 515
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TD G+ HL ++TL+ L + LT DG+A L+ L L LDL
Sbjct: 443 LTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCKNLTDDGLAHLTPLIALQYLDLI 502
Query: 60 G 60
G
Sbjct: 503 G 503
>gi|374586212|ref|ZP_09659304.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
gi|373875073|gb|EHQ07067.1| hypothetical protein Lepil_2392 [Leptonema illini DSM 21528]
Length = 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 16 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 75
TDA M LLS+ LEKL L T + L+ ++L L+L P+TD L+S+ +
Sbjct: 62 TDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITDAGLKSIGQIK 121
Query: 76 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTI 130
LE LDL +++++ G A L RL L+L T VT + + SLE L L+ I
Sbjct: 122 TLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGI 181
Query: 131 -DSILEGNENKAPLAKISLAGTTFINEREAFLY----IETSLLSFLDVSNSSLSRFCFLT 185
D +E L K+ L GT +E ++ ++ ++ S + L R L
Sbjct: 182 TDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGKGLVR---LR 238
Query: 186 QMKALEHLDLSSSMIGDDSV 205
Q K L L L+ + + DD +
Sbjct: 239 QAKNLRRLWLADTSVDDDDL 258
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LKEL+LS +TDAG+K + I TLEKL L+ET +T G+A L L L L L V
Sbjct: 99 LKELNLSTG-PITDAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLKDLSLIDTAV 157
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
TD + S+ + LE L L + +++RG L RL L L T VT
Sbjct: 158 TDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKLILGGTAVT 206
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+L L HL+ LNL ++DA L + K L L L +TD + L LS+L
Sbjct: 89 ALVHLAGFKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKITDAGVADLVGLSRLK 148
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+LS+ D +T++ + S +SL++L L+
Sbjct: 149 DLSLIDTAVTDACMTSIMQMKSLEILQLN 177
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 138/355 (38%), Gaps = 71/355 (20%)
Query: 54 SVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----- 108
+V D L TD + L + +LE L L G ++ L F L LNL+
Sbjct: 52 AVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALVHLAGFKHLKELNLSTGPITD 111
Query: 109 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 168
G+ + I +LE L+L+ KI+ AG + + S L
Sbjct: 112 AGLKSIGQIKTLEKLDLAET----------------KITDAGVADL--------VGLSRL 147
Query: 169 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L + +++++ C + QMK+LE L L+ + I D VE + + + R
Sbjct: 148 KDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQL-----------IQHQR-- 194
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
L L L GT + D ++ Y++ + +L S T I+G
Sbjct: 195 -------------LRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGK--------- 232
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELIHLSLRNASLTDVSLHQLSSL 345
L L+ +L RL L T V D L L EL L L + +T ++ ++
Sbjct: 233 ---GLVRLRQAKNLRRLWLADTSVDDDDLIELLQPPMELDMLHLGHLKITGKTMEAIARC 289
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
+ + +L + + N L P LK + + +T+D + F K P + V
Sbjct: 290 NCVKDLYVGYTKIGNDDLLKLIPATRLKSITVTKTR-VTDDGYIPFHKARPDVIV 343
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDA M ++ + +LE L L+ TG+T G+ L Q L L LGG VTD + + +
Sbjct: 157 VTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQI 216
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
L+ +++ +G L+ L L LA T V
Sbjct: 217 ANLDEAVFSRTKIRGKGLVRLRQAKNLRRLWLADTSV 253
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L++LDL+ K+TDAG+ L+ +S L+ L L +T +T + + +++L +L L
Sbjct: 120 IKTLEKLDLAET-KITDAGVADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNM 178
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAWTGVTKLP 115
+TD + L +L L L G+ V++ + L S + G+ +L
Sbjct: 179 TGITDRGVEQLIQHQRLRKLILGGTAVTDESVGYVAQIANLDEAVFSRTKIRGKGLVRLR 238
Query: 116 NISSLECLNLSNCTID 131
+L L L++ ++D
Sbjct: 239 QAKNLRRLWLADTSVD 254
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 177 SLSRFCFLTQMKALEHLDLSS----SMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVG 231
++ ++ + Q+K + ++ + +G EM + L L+L ++ A +
Sbjct: 32 AIEQYVYTGQLKGVTMAEIRAVKDWYALGATDAEMPRLLSMQRLEKLSLGGQNYTDAALV 91
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
LAG +L+ L+LS I D + + + +L+ +D++ T I TD +
Sbjct: 92 HLAG-FKHLKELNLSTGPITDAGLKSIGQIKTLEKLDLAETKI----------TDA--GV 138
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L+ L+ L+L T V+DA + + K L L L +TD + QL +L L
Sbjct: 139 ADLVGLSRLKDLSLIDTAVTDACMTSIMQMKSLEILQLNMTGITDRGVEQLIQHQRLRKL 198
Query: 352 SIRDAVLTNSGLG 364
+ +T+ +G
Sbjct: 199 ILGGTAVTDESVG 211
>gi|290974856|ref|XP_002670160.1| predicted protein [Naegleria gruberi]
gi|284083716|gb|EFC37416.1| predicted protein [Naegleria gruberi]
Length = 376
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 145/306 (47%), Gaps = 39/306 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L +L++ R ++ + G K++ + L +L + G+ +G+ +S L+NL++L++
Sbjct: 81 MNNLTKLNIER-NEIGEEGAKYISKMKQLTELNVGWNGIGKEGVEFISELKNLTLLEIEA 139
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLP 115
+ D +S+ L +L +L++ + +SN G+ L +L+ L N++ G +
Sbjct: 140 CRICDEGAKSISELKQLTHLNISYNNISNLGSKYLTELKQLTVLTLCDCNISEEGCKYIS 199
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
++ L L++SN I G +I+ + L++ ++ +N
Sbjct: 200 ELNQLTDLDISN----------------NDIGCNGVEYISGMKQLLFL------YIYGTN 237
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+ +++MK + +L++S + +GD+ + ++ + L L + + S+ G ++
Sbjct: 238 MYPTELQKISEMKQVTNLNISWNYVGDEGAKYISDM-KQLTKLEVVRSDISTEGAKHIS- 295
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L L++ I +S M L+ +DIS+ +I G +GAE ++ ++
Sbjct: 296 ELKQLTDLNIGENNIGGEGAIAISKMNQLRILDISDNNIGG----IGAE-----HVSQMK 346
Query: 296 NLNHLE 301
L HL+
Sbjct: 347 QLTHLD 352
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F++++K L L++ + I D+ + ++ + L +LN+S S+ G L L L +
Sbjct: 125 FISELKNLTLLEIEACRICDEGAKSISEL-KQLTHLNISYNNISNLGSKYLT-ELKQLTV 182
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETDLVLSL-------TA 293
L+L I + Y+S + L +DISN DI G G + L L + T
Sbjct: 183 LTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTE 242
Query: 294 LQNLNHLER---LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
LQ ++ +++ LN+ V D +S K+L L + + ++ +S L +LT+
Sbjct: 243 LQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSDISTEGAKHISELKQLTD 302
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L+I + + G + L++LD+
Sbjct: 303 LNIGENNIGGEGAIAISKMNQLRILDI 329
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+++ G K+L + L L L + ++ +G +S L L+ LD+ + + + +
Sbjct: 166 ISNLGSKYLTELKQLTVLTLCDCNISEEGCKYISELNQLTDLDISNNDIGCNGVEYISGM 225
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
+L +L ++G+ + + +++ LN++W G + ++ L L +
Sbjct: 226 KQLLFLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEGAKYISDMKQLTKLEVVRSD 285
Query: 130 IDSILEGNENKAPLAKIS--LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLT 185
I + EG ++ + L +++ G I A + + L LD+S++++ ++
Sbjct: 286 IST--EGAKHISELKQLTDLNIGENNIGGEGAIAISKMNQLRILDISDNNIGGIGAEHVS 343
Query: 186 QMKALEHLDLSSSMIGD 202
QMK L HLD+S + IG+
Sbjct: 344 QMKQLTHLDISHNCIGN 360
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
++++MK L L++ + IG + VE ++ + NL L + R G ++ L L
Sbjct: 101 YISKMKQLTELNVGWNGIGKEGVEFISEL-KNLTLLEIEACRICDEGAKSIS-ELKQLTH 158
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L++S I + Y++ + L + + + +I + G + + LN L
Sbjct: 159 LNISYNNISNLGSKYLTELKQLTVLTLCDCNI----SEEGCK--------YISELNQLTD 206
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L++ + + +S K+L+ L + ++ L ++S + ++TNL+I + + G
Sbjct: 207 LDISNNDIGCNGVEYISGMKQLLFLYIYGTNMYPTELQKISEMKQVTNLNISWNYVGDEG 266
Query: 363 LGSFKPPRSLKLLDLHGGWLLTEDA 387
+ L L++ + TE A
Sbjct: 267 AKYISDMKQLTKLEVVRSDISTEGA 291
>gi|124004058|ref|ZP_01688905.1| Rab family protein [Microscilla marina ATCC 23134]
gi|123990637|gb|EAY30117.1| Rab family protein [Microscilla marina ATCC 23134]
Length = 1165
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 156/358 (43%), Gaps = 85/358 (23%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L S+++L+ L L ++ + L +L +L ++ L PVTDL LQ L L+ LDL
Sbjct: 242 LKSLNSLQSLVLRNNQIS--DLTPLQALHSLQLIVLRDNPVTDLT--PLQSLRNLQSLDL 297
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 142
+Q+S+ +T L N+SSL+ ++L + I+
Sbjct: 298 RNNQISD---------------------LTPLQNLSSLQSIDLRHNPIN----------- 325
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
+ L +D+ + ++ L + LE +DLS + I D
Sbjct: 326 ---------------DLLPLQNLPNLQSIDLKYNHINDLAPLQNLPNLESIDLSDNQISD 370
Query: 203 DSVEMVACVGANLRNL-NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMS 259
+ L+NL NL + S+ V LA +LPNLE + LS QI+D A +
Sbjct: 371 LTP---------LQNLSNLQSIDLSNNQVNHLASLQYLPNLESIDLSDNQINDLAP--LQ 419
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
+ L+ ID+SN I LT LQNL +LE ++L Q+SD T PL
Sbjct: 420 NLGDLQSIDLSNNQIH--------------DLTPLQNLPNLESIDLSDNQISDLT--PLQ 463
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L ++LRN ++D+S L +L L +++ D + S L + LK +DL
Sbjct: 464 NLGSLQSINLRNNQVSDLS--PLQALHDLQAINLSDNQI--SDLAPLQKLPHLKSIDL 517
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 101
+ +A L +L NL +DL ++DL LQ L+ L+ +DL +QV++ A L+ P L
Sbjct: 347 NDLAPLQNLPNLESIDLSDNQISDLT--PLQNLSNLQSIDLSNNQVNH--LASLQYLPNL 402
Query: 102 SFLNLAWTGVTKLP---NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
++L+ + L N+ L+ ++LSN I + PL +
Sbjct: 403 ESIDLSDNQINDLAPLQNLGDLQSIDLSNNQIHDL-------TPLQNLPN---------- 445
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
L +D+S++ +S L + +L+ ++L ++ + D S +L+ +
Sbjct: 446 ---------LESIDLSDNQISDLTPLQNLGSLQSINLRNNQVSDLSPLQAL---HDLQAI 493
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NLS+ + S LP+L+ + L QI+ + ++ P L + + + I+G
Sbjct: 494 NLSDNQISDLAP---LQKLPHLKSIDLRDNQIEVFPEHLITNCPQLTSLHLYHNPIQGLP 550
Query: 279 QQV 281
++
Sbjct: 551 PEI 553
>gi|168699408|ref|ZP_02731685.1| hypothetical protein GobsU_07802 [Gemmata obscuriglobus UQM 2246]
Length = 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 44/237 (18%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L +K L L L+++ + D V+ +A + A+L L+L++T + AGV LA L L L
Sbjct: 93 LAPLKKLTTLQLTAAKVTDAGVKELASL-ASLTTLDLASTNVTDAGVKELA-PLTRLTAL 150
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
LSGT++ D + ++ + +L + + +T + G SL L L +L+ L
Sbjct: 151 DLSGTKVTDAGLKELAPLKNLVTLSLGSTAVTGA------------SLKELAPLTNLKTL 198
Query: 304 NLEQT------------------------QVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
+L T +V+DA L L+ K L L+L +T L
Sbjct: 199 HLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGTKVTSAGL 258
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT------EDAILQ 390
+L++L LT L + +T++GL P +LK+L L G + T +DA+L+
Sbjct: 259 KELAALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 58/277 (20%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG+K L + L L L+ +T G+ L+SL +L+ LDL VTD ++ L L
Sbjct: 85 VTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELASLASLTTLDLASTNVTDAGVKELAPL 144
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCT 129
T+L LDL G++V++ G L L L+L T VT +L +++L+ L+L +
Sbjct: 145 TRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGSTAVTGASLKELAPLTNLKTLHLYDT- 203
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
K++ AG + E + T L+ V+++ L LT +K
Sbjct: 204 ---------------KMTDAG---LKELAPLTSLTTLTLAATKVTDAGLKG---LTPLK- 241
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
NL +LNL T+ +SAG+ LA L NL +L L T
Sbjct: 242 ------------------------NLSDLNLGGTKVTSAGLKELAA-LKNLTVLDLDVTA 276
Query: 250 IDDYAISYMSMMPSLKFI-----DISNTDIKGFIQQV 281
+ D + ++ + +LK + ++ +K F V
Sbjct: 277 VTDAGLKELTPLTNLKVLRLVGAKVTTKGVKEFKDAV 313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL +L L + AG+ LA L L L L+ ++ D + ++ + SL +D+++T+
Sbjct: 74 NLTSLKLIGPVVTDAGLKALA-PLKKLTTLQLTAAKVTDAGVKELASLASLTTLDLASTN 132
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ TD + L L L L+L T+V+DA L L+ K L+ LSL + +
Sbjct: 133 V----------TDA--GVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGSTA 180
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+T SL +L+ L+ L L + D +T++GL
Sbjct: 181 VTGASLKELAPLTNLKTLHLYDTKMTDAGL 210
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
KVTDAG+K L + L L L T +T+ G+ L++L+NL+VLDL VTD L+ L
Sbjct: 228 KVTDAGLKGLTPLKNLSDLNLGGTKVTSAGLKELAALKNLTVLDLDVTAVTDAGLKELTP 287
Query: 74 LTKLEYLDLWGSQVSNRGA-----AVLK 96
LT L+ L L G++V+ +G AVLK
Sbjct: 288 LTNLKVLRLVGAKVTTKGVKEFKDAVLK 315
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 25/257 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+TDAGMK L ++ L L L +T G+ L+ L+ L+ L L VTD ++ L
Sbjct: 60 KMTDAGMKELAALRNLTSLKLIGPVVTDAGLKALAPLKKLTTLQLTAAKVTDAGVKELAS 119
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
L L LDL + V++ G L RL+ L+L+ T VT +L + +L L+L +
Sbjct: 120 LASLTTLDLASTNVTDAGVKELAPLTRLTALDLSGTKVTDAGLKELAPLKNLVTLSLGST 179
Query: 129 TIDSILEGNENKAPL----------AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+ + APL K++ AG + E + T L+ V+++ L
Sbjct: 180 AVTG--ASLKELAPLTNLKTLHLYDTKMTDAG---LKELAPLTSLTTLTLAATKVTDAGL 234
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
LT +K L L+L + + ++ +A + NL L+L T + AG+ L L
Sbjct: 235 KG---LTPLKNLSDLNLGGTKVTSAGLKELAAL-KNLTVLDLDVTAVTDAGLKELT-PLT 289
Query: 239 NLEILSLSGTQIDDYAI 255
NL++L L G ++ +
Sbjct: 290 NLKVLRLVGAKVTTKGV 306
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L ++ L L L ++ D ++ +A + L L L+ + + AGV LA L +L L
Sbjct: 69 LAALRNLTSLKLIGPVVTDAGLKALAPL-KKLTTLQLTAAKVTDAGVKELA-SLASLTTL 126
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L+ T + D + ++ + L +D+S T + TD L L L +L L
Sbjct: 127 DLASTNVTDAGVKELAPLTRLTALDLSGTKV----------TDA--GLKELAPLKNLVTL 174
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+L T V+ A+L L+ L L L + +TD L +L+ L+ LT L++ +T++GL
Sbjct: 175 SLGSTAVTGASLKELAPLTNLKTLHLYDTKMTDAGLKELAPLTSLTTLTLAATKVTDAGL 234
Query: 364 GSFKPPRSLKLLDLHG 379
P ++L L+L G
Sbjct: 235 KGLTPLKNLSDLNLGG 250
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-- 58
+T L LDLS KVTDAG+K L + L L L T +T + L+ L NL L L
Sbjct: 144 LTRLTALDLS-GTKVTDAGLKELAPLKNLVTLSLGSTAVTGASLKELAPLTNLKTLHLYD 202
Query: 59 -----GGL-----------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
GL VTD L+ L L L L+L G++V++ G L
Sbjct: 203 TKMTDAGLKELAPLTSLTTLTLAATKVTDAGLKGLTPLKNLSDLNLGGTKVTSAGLKELA 262
Query: 97 MFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDS 132
L+ L+L T VT +L +++L+ L L + +
Sbjct: 263 ALKNLTVLDLDVTAVTDAGLKELTPLTNLKVLRLVGAKVTT 303
>gi|254829631|ref|ZP_05234318.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
gi|258602049|gb|EEW15374.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N3-165]
Length = 1778
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++A +G NL +L N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQTNLIANIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLIAN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 156/331 (47%), Gaps = 62/331 (18%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L+ ++ L+K+ LS +T + LS L NL LDL +T++ L LT LE+LDL
Sbjct: 113 LVELTNLKKVDLSHNQIT--NVNPLSGLTNLEWLDLSRNQITNV--NPLSELTNLEWLDL 168
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE--NK 140
+Q++N + L L FLNL+ +T IS+L +NL D L N+ +
Sbjct: 169 GHNQITN--ISPLSGLTNLEFLNLSHNQITNFRIISAL--INLK----DIALNNNQITDI 220
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
PLA E + L + ++N+ ++ L Q+ LE L + ++ I
Sbjct: 221 YPLA-------------------ELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQI 261
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
D + ++ + NLR L L++ + + L NL L+LS QI D + +S
Sbjct: 262 TD--IRPLSQL-TNLRQLALNHNQITDIRP---LSQLTNLTGLALSHNQITD--VRPLSQ 313
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
+ +L++I ++ I ++T L NLN+L L+L QV++ T PL
Sbjct: 314 LTNLEWIHLNYNQIT--------------NITPLVNLNNLTGLDLHSNQVTNVT--PLVQ 357
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
K L + LR +TD+ SSLS LTNL
Sbjct: 358 LKNLKWIDLRFNQITDI-----SSLSGLTNL 383
>gi|417301579|ref|ZP_12088730.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327542171|gb|EGF28664.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 442
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 56/352 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAGM++L S+ L+ L L++T +T + + L ++ L L VTD L L L
Sbjct: 107 IDDAGMENLTSLPKLKYLTLADTAITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGL 166
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+KL +DL + + + G L L + L + VT
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKSKVTD--------------------- 205
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
EG APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 206 EGLVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLEYLQ 245
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
S I D S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 246 GDYSKINDASMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDG 303
Query: 255 ISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLE 301
+ +S +P++ ++DIS + I Q+G T L +L +L +LE
Sbjct: 304 LKVISQLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLE 363
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 364 ELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 140/299 (46%), Gaps = 43/299 (14%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TD +K + +++ L+L TG+T +G+ LL+ L L +DL + D + SL +
Sbjct: 131 ITDETLKTAGKLDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKI 190
Query: 75 TKLEYLDLWGSQVSNRG---------------------AAVLKMF---PRLSFLNLAWTG 110
L + L S+V++ G +KM P L +L ++
Sbjct: 191 KTLIDVQLEKSKVTDEGLVKLAPLPLKSINFNYCTTINGPTMKMLGQTPTLEYLQGDYSK 250
Query: 111 V-----TKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
+ +L +S L+ L + C + + I NKA LA+ L ++ +++ +
Sbjct: 251 INDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKA-LARFELRDSS-VDDDGLKVIS 308
Query: 164 ETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNL 218
+ ++++D+S L+ L ++ L +L L + D E +A G NL L
Sbjct: 309 QLPAVTYVDISECRLASPEGIAQLGKLTGLTYLGLWETKTND---ETLAGFGDLVNLEEL 365
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
NL +T + + +L + L+ L+++GTQ+ D + ++ +P+LK ++++NT I GF
Sbjct: 366 NLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNVANTSI-GF 422
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+PN + +G IDD + ++ +P LK++ +++T I TD L
Sbjct: 94 IPNTTKATFNGPGIDDAGMENLTSLPKLKYLTLADTAI----------TDETLKTAG--K 141
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L+ ++ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 LDSVQGLFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVQLEKS 201
Query: 357 VLTNSGLGSFKP 368
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
+D+S C + G+ L ++ L L L ET + +A L NL L+L VTD
Sbjct: 316 VDISECRLASPEGIAQLGKLTGLTYLGLWETKTNDETLAGFGDLVNLEELNLKSTAVTDE 375
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 126
L L +TKL+ L++ G+Q+ + SFL LA KLPN+ S+ N S
Sbjct: 376 SLPVLMKMTKLKTLNVAGTQLGDD-----------SFLELA-----KLPNLKSMNVANTS 419
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ DA M L +S L++L + +T +GI ++ + L+ +L V D L+ +
Sbjct: 250 KINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARFELRDSSVDDDGLKVISQ 309
Query: 74 LTKLEYLDLWGSQV-SNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
L + Y+D+ ++ S G A L L++L L W TK T D
Sbjct: 310 LPAVTYVDISECRLASPEGIAQLGKLTGLTYLGL-WE--TK---------------TNDE 351
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
L G + L +++L T +E L +M L+
Sbjct: 352 TLAGFGDLVNLEELNLKSTAVTDE-----------------------SLPVLMKMTKLKT 388
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
L+++ + +GDDS +A + NL+++N++NT + LA + P+L+++
Sbjct: 389 LNVAGTQLGDDSFLELAKL-PNLKSMNVANTSIGFDVIDTLAENHPDLQVIEF 440
>gi|348688896|gb|EGZ28710.1| hypothetical protein PHYSODRAFT_322345 [Phytophthora sojae]
Length = 683
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 176/387 (45%), Gaps = 63/387 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L L+LS C ++TD G+ L ++ L L + G +T +G+ L+ L +L LD+
Sbjct: 304 VTSLTSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLKALAPLVDLITLDIA 363
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTK 113
G +++ G +VL FP LS NL + T
Sbjct: 364 GC-----------------------YNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEH 400
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
+ +++ + LN C K++ G I++ ++ ++S +V
Sbjct: 401 MESLTKMRFLNFMKC---------------GKVTDKGLRSISKLRNLTSLD--MVSCFNV 443
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
++ L+ L ++K+L +L S I DD + ++ + +L L+LSN R +
Sbjct: 444 TDDGLNELVGLHRLKSL-YLG-GCSGIRDDGIAALSQL-KSLVILDLSNCRQVGNKALLG 500
Query: 234 AGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
G L NL L+L +IDD I+Y++ + LK +++SN + A T + +T
Sbjct: 501 LGELHNLTNLNLMRCNRIDDEGIAYLAGLKRLKTLNLSNCRL-----LTDAATTTIAQMT 555
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNL 351
L+++ L N +++D + L++ +L + L + S LTD L S+ KLT+L
Sbjct: 556 ELESI-VLWYCN----KLTDTGVMNLASLTKLQSIDLASCSKLTDACLSTFPSIPKLTSL 610
Query: 352 SIRD-AVLTNSGLGSFKPPRSLKLLDL 377
+ + +LT+ G+ + SL L+L
Sbjct: 611 DLGNCCLLTDEGMATLGKVTSLTSLNL 637
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 197/471 (41%), Gaps = 98/471 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 61
LKE++L+ C +TD ++ L I +E + L D IAL SL + G
Sbjct: 177 LKEVNLTGCSNLTDESVEQLAQIPRMESIALKGCYQVTDKGIIALTESLSSSLTSLNLGY 236
Query: 62 P--VTDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 109
V+D + ++ L KL YL L G SQV + G L L+ LNL +
Sbjct: 237 CKVVSDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDD 296
Query: 110 GVTKLPNISSLECLNLSNCT--------------------IDSILEGNENK----APLAK 145
G++ L ++SL LNLSNC+ ++ E +N APL
Sbjct: 297 GISALAGVTSLTSLNLSNCSQLTDVGISSLGALVNLRHLEFANVGEVTDNGLKALAPLVD 356
Query: 146 ---ISLAGTTFINEREA-----FLYIETSLLSFL-DVSNSSLSRFCFLTQMKALEHLDLS 196
+ +AG I + F + + L + ++ +++ LT+M+ L +
Sbjct: 357 LITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNF--MK 414
Query: 197 SSMIGDDSVEMVACVGANLRNLN----LSNTRFSSAGVGILAGHLPNLEILSLSG-TQID 251
+ D + + + LRNL +S + G+ L G L L+ L L G + I
Sbjct: 415 CGKVTDKGLRSI----SKLRNLTSLDMVSCFNVTDDGLNELVG-LHRLKSLYLGGCSGIR 469
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QV 310
D I+ +S + SL +D+SN +QVG + +L L L++L LNL + ++
Sbjct: 470 DDGIAALSQLKSLVILDLSN------CRQVGNK-----ALLGLGELHNLTNLNLMRCNRI 518
Query: 311 SDATLFPLSTFKELIHLSLRNA--------------------------SLTDVSLHQLSS 344
D + L+ K L L+L N LTD + L+S
Sbjct: 519 DDEGIAYLAGLKRLKTLNLSNCRLLTDAATTTIAQMTELESIVLWYCNKLTDTGVMNLAS 578
Query: 345 LSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
L+KL ++ + + LT++ L +F L LDL LLT++ + K+
Sbjct: 579 LTKLQSIDLASCSKLTDACLSTFPSIPKLTSLDLGNCCLLTDEGMATLGKV 629
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 39/223 (17%)
Query: 204 SVEMVACVGANLRNLNLSNTRFSSA----GVGILA--GHLPNLEILSLSGTQIDDYAISY 257
S E V+ + ANL LN + R S G+ LA HL L + + + D IS
Sbjct: 241 SDEAVSAIAANLPKLNYLSLRGCSQVGDIGIRELARLKHLTTLNLWYANQGNLTDDGISA 300
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT--------- 308
++ + SL +++SN + VG + SL AL NL HLE N+ +
Sbjct: 301 LAGVTSLTSLNLSNC---SQLTDVG-----ISSLGALVNLRHLEFANVGEVTDNGLKALA 352
Query: 309 --------------QVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLS- 352
++DA L+ F L +L S + D + + SL+K+ L+
Sbjct: 353 PLVDLITLDIAGCYNITDAGTSVLANFPNLSSCNLWYCSEIGDTTFEHMESLTKMRFLNF 412
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMH 395
++ +T+ GL S R+L LD+ + +T+D + + +H
Sbjct: 413 MKCGKVTDKGLRSISKLRNLTSLDMVSCFNVTDDGLNELVGLH 455
>gi|414586494|tpg|DAA37065.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 400
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C +TD+ MK+L ++ L +L LS ++A G++ L L L L+L G VT + L +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVI 302
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 126
L L L+L + + G LK +L L+L + +T L ++ +LECLNL
Sbjct: 303 SELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLD 362
Query: 127 NCTI 130
+C I
Sbjct: 363 SCKI 366
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 54/263 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL---- 58
++ L C ++++ G+K L S L L + + +TA+G ++L NL LDL
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKLKALSLG 338
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
F +A L L + LE L+L S IGD+ + + +
Sbjct: 339 FNQITDACLI--------------------HLKDLVNLECLNLDSCKIGDEGLFHLKGL- 377
Query: 213 ANLRNLNLSNTRFSSAGVGILAG 235
L+NL LS+T S G+ L+G
Sbjct: 378 IQLKNLELSDTEVGSNGLRHLSG 400
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE-TDLVL------ 289
L NL L LS +I + +SY+ + L +++ + +V +E LVL
Sbjct: 257 LTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRC 316
Query: 290 -----SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
L+ L L+ L+L Q++DA L L L L+L + + D L L
Sbjct: 317 GICDEGCENLKGLTKLKALSLGFNQITDACLIHLKDLVNLECLNLDSCKIGDEGLFHLKG 376
Query: 345 LSKLTNLSIRDAVLTNSGL 363
L +L NL + D + ++GL
Sbjct: 377 LIQLKNLELSDTEVGSNGL 395
>gi|430746800|ref|YP_007205929.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
gi|430018520|gb|AGA30234.1| hypothetical protein Sinac_6131 [Singulisphaera acidiphila DSM
18658]
Length = 270
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
++ L L R ++DA M HL ++ LE L+ + +T G+ + L L L L G+P+
Sbjct: 116 IRTLTLGRDPSISDADMVHLKGMADLEALFFDKGKITGAGLENFAGLPKLHTLSLQGIPL 175
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
TD LR L+ LT + L L ++++ G LK L F++L TGVT L ++S
Sbjct: 176 TDGDLRPLEALTNPDALTLDSPRITDVGLVHLKHLVPLRFISLNETGVTGAGLGNLADMS 235
Query: 119 SLECLNLSNCTIDSI 133
+LE L L + S+
Sbjct: 236 NLEILYLVKTNVSSL 250
>gi|46447197|ref|YP_008562.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400838|emb|CAF24287.1| hypothetical protein pc1563 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 380
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ L+L+ C K+TDAG+ HL + L+ L L+ LT G+A L+ L L LDL
Sbjct: 208 LVALQHLNLAGCRKLTDAGLAHLTPLVVLQYLSLAGCDNLTDAGLAHLTPLVALQHLDLN 267
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
G P +T + L L+ L L++L+L W ++++ G A LK L +LNLA G+
Sbjct: 268 GCPNLTGVGLAHLKPLVALQHLNLSWCDKLTDAGLAHLKPLVALHYLNLAGCDKLTDAGL 327
Query: 112 TKLPNISSLECLNLSNCT 129
L + +L+ L+L+ C+
Sbjct: 328 VHLMPLVTLQHLDLTACS 345
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
LKEL L C +TDAG+ HL S+ L+ L L+ LT G+A L+ L L L L G
Sbjct: 186 LKELHLQDCYMLTDAGLAHLASLVALQHLNLAGCRKLTDAGLAHLTPLVVLQYLSLAGCD 245
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L L L++LDL G ++ G A LK L LNL+W G+ L
Sbjct: 246 NLTDAGLAHLTPLVALQHLDLNGCPNLTGVGLAHLKPLVALQHLNLSWCDKLTDAGLAHL 305
Query: 115 PNISSLECLNLSNC 128
+ +L LNL+ C
Sbjct: 306 KPLVALHYLNLAGC 319
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+ L L+L+ C K+TDAG+ HL+ + TL+ L L+ + LT G+A L L L L+LG
Sbjct: 308 LVALHYLNLAGCDKLTDAGLVHLMPLVTLQHLDLTACSNLTDVGLAHLKPLVALQHLNLG 367
Query: 60 GLP 62
P
Sbjct: 368 WCP 370
>gi|59802548|gb|AAX07514.1| putative regulatory subunit [Gemmata sp. Wa1-1]
Length = 250
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
KVTDAG+K L ++ L L L +T +T G+ L+ L NL+ L+LG VTD L+ L
Sbjct: 53 TKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELA 112
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSN 127
LT L L L +QV++ G L L+ L L T G+ +L + L L+LS
Sbjct: 113 PLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQITEAGIKELAPFTKLTRLDLSI 172
Query: 128 CTI-DSILEGNENKAPLAKISLAGT 151
+ D+ ++G L +++L GT
Sbjct: 173 TRVTDAGVKGLAPFTKLTQLNLGGT 197
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
KVTDAG+K L ++ L L L T +T G+ L+ L NL+VL LG VTD L+ L
Sbjct: 77 TKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLTVLTLGSTQVTDAGLKELA 136
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSN 127
L L L+L +Q++ G L F +L+ L+L+ T GV L + L LNL
Sbjct: 137 PLKSLTLLELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGG 196
Query: 128 CTI-DSILEGNENKAPLAKISLAGTTFINEREA 159
+ D+ L ++ APL ++ + NER+
Sbjct: 197 TLVTDTCL---KDLAPLKNLAFLSLSR-NERDG 225
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L +K L L+L + + D ++ ++ + L +L L T+ + AG+ LA L NL L
Sbjct: 39 LAPLKNLTQLNLCLTKVTDAGLKELSPL-TKLTHLCLMQTKVTDAGLKELA-PLTNLTTL 96
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L TQ+ D + ++ + +L + + +T + TD L L L L L
Sbjct: 97 ELGSTQVTDAGLKELAPLTNLTVLTLGSTQV----------TDA--GLKELAPLKSLTLL 144
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L +TQ+++A + L+ F +L L L +TD + L+ +KLT L++ ++T++ L
Sbjct: 145 ELGETQITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNLGGTLVTDTCL 204
Query: 364 GSFKPPRSLKLLDL 377
P ++L L L
Sbjct: 205 KDLAPLKNLAFLSL 218
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL LNL T+ + AG+ L+ L L L L T++ D + ++ + +L +++ +T
Sbjct: 44 NLTQLNLCLTKVTDAGLKELS-PLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQ 102
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ TD L L L +L L L TQV+DA L L+ K L L L
Sbjct: 103 V----------TDA--GLKELAPLTNLTVLTLGSTQVTDAGLKELAPLKSLTLLELGETQ 150
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+T+ + +L+ +KLT L + +T++G+ P L L+L GG L+T+
Sbjct: 151 ITEAGIKELAPFTKLTRLDLSITRVTDAGVKGLAPFTKLTQLNL-GGTLVTD 201
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L L +L +LNL T+V+DA L LS +L HL L +TD L +L+ L+ LT
Sbjct: 36 LKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTT 95
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L + +T++GL P +L +L L
Sbjct: 96 LELGSTQVTDAGLKELAPLTNLTVLTL 122
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
L L L L L L QT+V+DA L L+ L L L + +TD L +L+ L+ LT
Sbjct: 59 GLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLELGSTQVTDAGLKELAPLTNLT 118
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 392
L++ +T++GL P +SL LL+L G +TE I +
Sbjct: 119 VLTLGSTQVTDAGLKELAPLKSLTLLEL-GETQITEAGIKELA 160
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
L+ L+NL+ L+L VTD L+ L LTKL +L L ++V++ G L L+ L L
Sbjct: 39 LAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAPLTNLTTLEL 98
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
T VT + E L+N T+ ++L T
Sbjct: 99 GSTQVT---DAGLKELAPLTNLTV---------------LTLGST--------------- 125
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
V+++ L L +K+L L+L + I + ++ +A L L+LS TR +
Sbjct: 126 -----QVTDAGLKE---LAPLKSLTLLELGETQITEAGIKELAPF-TKLTRLDLSITRVT 176
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
AGV LA L L+L GT + D + ++ + +L F+ +S + G GA +
Sbjct: 177 DAGVKGLA-PFTKLTQLNLGGTLVTDTCLKDLAPLKNLAFLSLSRNERDG---AAGASRE 232
Query: 287 LVLSLTALQNLN 298
L +L +LN
Sbjct: 233 LGTTLRPSPDLN 244
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 368
+V+DA L L+ K L L+L +TD L +LS L+KLT+L + +T++GL P
Sbjct: 30 KVTDADLKELAPLKNLTQLNLCLTKVTDAGLKELSPLTKLTHLCLMQTKVTDAGLKELAP 89
Query: 369 PRSLKLLDL 377
+L L+L
Sbjct: 90 LTNLTTLEL 98
>gi|149918767|ref|ZP_01907254.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
gi|149820368|gb|EDM79784.1| hypothetical protein PPSIR1_31833 [Plesiocystis pacifica SIR-1]
Length = 541
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+EL+L +VT G++HL +S LE L L T + +G+A L+ L L L L
Sbjct: 430 MVRLRELELHH-TRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAKLGALRELRLDN 488
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 109
+TD+ + L L+ LE L+L + V++ G VL PRL +NLA T
Sbjct: 489 TLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSALPRLEVVNLAGT 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 134/319 (42%), Gaps = 63/319 (19%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-------------- 89
+A SLQ+L+V+D +T+ L L+ L L ++ G SN
Sbjct: 236 VAKAKSLQSLAVIDTA---LTNYSLHPLKGLDHLHRIEWSGQGWSNTSPQYLRDLPIDEL 292
Query: 90 ---------RGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILE 135
RG +L+ L L L + VT L +LE L L C +DS E
Sbjct: 293 ICDCPRFGDRGLFMLRYLEGLQVLELERSAVTSAGLVHLAENPALEDLTLRGCDLDS--E 350
Query: 136 GNENKAPLAKIS--LAGTTFINEREA--------FLYIETSLLSFLDVSNSSLSRFCFLT 185
G A L ++ + G + + +A +E L F D + L+ L
Sbjct: 351 GFTALAALPRLRRLIVGPASLLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVNL- 409
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
E LDL ++ + D+ +E +A + LR L L +TR + G+ L G L LEIL L
Sbjct: 410 -----ERLDLGNTAVSDEGLEHLAGM-VRLRELELHHTRVTRHGLEHLQG-LSALEILEL 462
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
T + D +++++ + +L+ + + NT I VG + L L+ LERLNL
Sbjct: 463 DHTDVVDEGVAHLAKLGALRELRLDNT----LITDVG--------VAHLAKLSDLERLNL 510
Query: 306 EQTQVSDATLFPLSTFKEL 324
T V+ + LS L
Sbjct: 511 ANTVVTSEGVEVLSALPRL 529
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 121/274 (44%), Gaps = 48/274 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+L R VT AG+ HL LE L L L ++G L++L L L +G +
Sbjct: 313 LQVLELERSA-VTSAGLVHLAENPALEDLTLRGCDLDSEGFTALAALPRLRRLIVGPASL 371
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D L +L L L+L +R A +L + +LE L
Sbjct: 372 LDGKAEGLGLLVSLRELELGLDGFGDRAA-------------------QELAPLVNLERL 412
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+L N + EG E+ LAG + E L++ ++ ++R
Sbjct: 413 DLGNTAVSD--EGLEH--------LAGMVRLRE--------------LELHHTRVTRHGL 448
Query: 184 --LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
L + ALE L+L + + D+ V +A +GA LR L L NT + GV LA L +LE
Sbjct: 449 EHLQGLSALEILELDHTDVVDEGVAHLAKLGA-LRELRLDNTLITDVGVAHLA-KLSDLE 506
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
L+L+ T + + +S +P L+ ++++ T +
Sbjct: 507 RLNLANTVVTSEGVEVLSALPRLEVVNLAGTRAR 540
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L+EL L + +TD G+ HL +S LE+L L+ T +T++G+ +LS+L L V++L G
Sbjct: 478 LGALRELRLDNTL-ITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSALPRLEVVNLAG 536
Query: 61 LPVTD 65
D
Sbjct: 537 TRARD 541
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
L+ L L + +SAG+ LA + P LE L+L G +D + ++ +P L+ + +
Sbjct: 312 GLQVLELERSAVTSAGLVHLAEN-PALEDLTLRGCDLDSEGFTALAALPRLRRLIVGPAS 370
Query: 274 I-KGFIQQVG-----AETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+ G + +G E +L L + L L +LERL+L T VSD L L+
Sbjct: 371 LLDGKAEGLGLLVSLRELELGLDGFGDRAAQELAPLVNLERLDLGNTAVSDEGLEHLAGM 430
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 381
L L L + +T L L LS L L + + + G+ +L+ L L
Sbjct: 431 VRLRELELHHTRVTRHGLEHLQGLSALEILELDHTDVVDEGVAHLAKLGALRELRLD-NT 489
Query: 382 LLTEDAILQFCKM 394
L+T+ + K+
Sbjct: 490 LITDVGVAHLAKL 502
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V D G+ HL + L +L L T +T G+A L+ L +L L+L VT + L L
Sbjct: 467 VVDEGVAHLAKLGALRELRLDNTLITDVGVAHLAKLSDLERLNLANTVVTSEGVEVLSAL 526
Query: 75 TKLEYLDLWGSQVSN 89
+LE ++L G++ +
Sbjct: 527 PRLEVVNLAGTRARD 541
>gi|290984372|ref|XP_002674901.1| predicted protein [Naegleria gruberi]
gi|284088494|gb|EFC42157.1| predicted protein [Naegleria gruberi]
Length = 599
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 160/370 (43%), Gaps = 50/370 (13%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL--PVTDLVLRSLQ 72
+ D G L + L+ L + + G + LS+L NL L + GL TD + R +
Sbjct: 254 IEDEGAILLGEMKQLKNLITACNNIGMKGFSSLSTLLNLESLVILGLDGKSTDFI-REMN 312
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSN 127
LT+LE+ +GS + +G + L+FL N+A + + L LN+ +
Sbjct: 313 QLTRLEF---YGSNLEPKGFDPISHLSNLTFLTIRGRNIADGDLECIGQFKKLTTLNVPS 369
Query: 128 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
C I+ +G ++ L L+FLD+S + + +T +
Sbjct: 370 CNIN---QGFKSICGLKN----------------------LTFLDLSYNKIESVESITNL 404
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K+L LD++ + IG + + ++ + NL NL + + G+ L+ + L L ++
Sbjct: 405 KSLTQLDINGNRIGHEGAKSISQLD-NLTNLQIGHNLIQDEGIKYLS-TMQCLTTLGVAE 462
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
QI ++S L +D++N I+ GA+ L LN+L L +
Sbjct: 463 NQISIEGAKFISKSHQLTSLDLTNN----VIETEGAKI--------LSELNNLTGLFVYG 510
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
++ D +ST ++L L + +TD +S+L +L+ L I + + G S
Sbjct: 511 NRIRDEGAKYISTMQQLTILDIAYNEITDEGAKAISNLDQLSTLYIYSNEICDEGAKSIC 570
Query: 368 PPRSLKLLDL 377
+ L +LD+
Sbjct: 571 GMKQLTILDI 580
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL+ V T+ G K L ++ L L++ + +G +S++Q L++LD+ +
Sbjct: 479 LTSLDLTNNVIETE-GAKILSELNNLTGLFVYGNRIRDEGAKYISTMQQLTILDIAYNEI 537
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 108
TD +++ L +L L ++ +++ + GA + +L+ L++ +
Sbjct: 538 TDEGAKAISNLDQLSTLYIYSNEICDEGAKSICGMKQLTILDIDY 582
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS--NTDIKGFIQQV 281
++ +GI + LEI S +++ ++++ M L +DIS N + KG I
Sbjct: 87 KWFCTNIGIFMKGMIRLEI---SYCRLEAEDVNFIGEMKQLTELDISLNNINCKGAI--- 140
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
+ L+ L +LN+ QT++ LS KEL L + + L
Sbjct: 141 -----------TISQLSKLTKLNVYQTKMGVEGAKELSKLKELTSLEIGDNHLKSEGAAH 189
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
++ + KLT L I ++ N G+ L LD+ + +E + CKM
Sbjct: 190 IAQMRKLTFLDINTNMIGNEGIELISRMEQLTDLDVMDNNIRSE-GVKSLCKM 241
>gi|149175123|ref|ZP_01853746.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
gi|148846101|gb|EDL60441.1| hypothetical protein PM8797T_25626 [Planctomyces maris DSM 8797]
Length = 1079
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V D+G+ L ++ LE+L+L T +T G+ LSSL+ L VL L L VTD +++L L
Sbjct: 115 VGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADL 174
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCT 129
LE L L G+QVS+ G L +L L LA T +T L + SLE L+L+
Sbjct: 175 NNLEVLFLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSLNRTK 234
Query: 130 IDSIL 134
+ ++
Sbjct: 235 LQPVV 239
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
P L+ L++ + D A+ Y+ D++N D + ++ L+ L+
Sbjct: 77 QFPRLDYLAMVCPHLGDEALLYIR--------DLTNLDTLMLSESAVGDS----GLSCLK 124
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
LN LERL L+ T+V+DA L LS+ K+L LSLRN ++TD + L+ L+ L L +
Sbjct: 125 KLNKLERLYLDNTKVTDAGLQHLSSLKQLKVLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
Query: 356 AVLTNSGLGSFKPPRSLKLLDL 377
++++GL S + LK+L L
Sbjct: 185 TQVSDAGLKSLTELKQLKILYL 206
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L Q L++L + +GD+++ + + NL L LS + +G+ L L LE L
Sbjct: 75 LEQFPRLDYLAMVCPHLGDEALLYIRDL-TNLDTLMLSESAVGDSGLSCLK-KLNKLERL 132
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L T++ D + ++S + LK + + N ++ TD + L +LN+LE L
Sbjct: 133 YLDNTKVTDAGLQHLSSLKQLKVLSLRNLNV----------TDQ--GMQTLADLNNLEVL 180
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L TQVSDA L L+ K+L L L ++T L L++L L +LS+
Sbjct: 181 FLSGTQVSDAGLKSLTELKQLKILYLARTAITGSQLSALNTLESLEHLSL 230
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+L +++L +L+ L L ++ V D+ L L +L L L N +TD L LSSL +L
Sbjct: 95 ALLYIRDLTNLDTLMLSESAVGDSGLSCLKKLNKLERLYLDNTKVTDAGLQHLSSLKQLK 154
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
LS+R+ +T+ G+ + +L++L L G
Sbjct: 155 VLSLRNLNVTDQGMQTLADLNNLEVLFLSG 184
>gi|290973212|ref|XP_002669343.1| predicted protein [Naegleria gruberi]
gi|284082889|gb|EFC36599.1| predicted protein [Naegleria gruberi]
Length = 440
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+V D G K+L + L L + + +G LS ++ L+ L++G + ++ +
Sbjct: 154 RVGDEGAKYLSEMKQLTSLNIGYNRVGIEGAKYLSEMEQLTSLNIGYSRIGIEGVKYISE 213
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
+ +L L++ ++VSN GA L +L LN+ GV L + L L++
Sbjct: 214 MKQLTSLNISKNEVSNEGAKYLSEMKQLRLLNIYHNEIGDEGVKYLSEMKQLTSLHIGYN 273
Query: 129 TIDSILEGNENKAPLAK----------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
I LEG + + + + IS G +++E E TSL +D S L
Sbjct: 274 RIG--LEGVKLISEMEQLTSLDISENEISDEGAKYLSEMEQL----TSL--NIDYSRIGL 325
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
++++MK L L ++ + IG ++++ + LR L++SN S G L+ +
Sbjct: 326 EGVKYISEMKQLTSLTIAYNRIGIKGAKLISEM-KQLRLLDISNNEISDEGAKYLS-EMK 383
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L L +S I + Y+S M L+ +DI+ I
Sbjct: 384 QLISLYISEIGIGIKGVKYISEMKQLRLLDITRNRI 419
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 148/323 (45%), Gaps = 37/323 (11%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
L+S+++ L+ L++ + D ++ + + +L L++ ++V + GA L +L+ LN
Sbjct: 114 LISAMKQLTSLNIYDNGIGDEEIKYISEMKQLTSLNIGYNRVGDEGAKYLSEMKQLTSLN 173
Query: 106 LAW--TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
+ + G+ +S +E L N ++I + G +I+E +
Sbjct: 174 IGYNRVGIEGAKYLSEMEQLTSLNI-------------GYSRIGIEGVKYISEMKQL--- 217
Query: 164 ETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
TSL +S +VSN +L++MK L L++ + IGD+ V+ ++ + L +L++
Sbjct: 218 -TSLNISKNEVSNEGAK---YLSEMKQLRLLNIYHNEIGDEGVKYLSEM-KQLTSLHIGY 272
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF--IDISNTDIKG--FI 278
R GV +++ + L L +S +I D Y+S M L ID S ++G +I
Sbjct: 273 NRIGLEGVKLIS-EMEQLTSLDISENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYI 331
Query: 279 QQVGAETDLVLSLTAL--------QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
++ T L ++ + + L L++ ++SD LS K+LI L +
Sbjct: 332 SEMKQLTSLTIAYNRIGIKGAKLISEMKQLRLLDISNNEISDEGAKYLSEMKQLISLYIS 391
Query: 331 NASLTDVSLHQLSSLSKLTNLSI 353
+ + +S + +L L I
Sbjct: 392 EIGIGIKGVKYISEMKQLRLLDI 414
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 50/225 (22%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G+K+L + L L + + +G+ L+S ++ L+ LD+
Sbjct: 250 EIGDEGVKYLSEMKQLTSLHIGYNRIGLEGVKLISEMEQLTSLDIS-------------- 295
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTID 131
+++S+ GA L +L+ LN+ ++ G+ + IS ++ L++ TI
Sbjct: 296 ----------ENEISDEGAKYLSEMEQLTSLNIDYSRIGLEGVKYISEMK--QLTSLTI- 342
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKA 189
+I + G I+E + L LD+SN+ +S +L++MK
Sbjct: 343 ----------AYNRIGIKGAKLISEMKQ--------LRLLDISNNEISDEGAKYLSEMKQ 384
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L L +S IG V+ ++ + LR L+++ R G +L+
Sbjct: 385 LISLYISEIGIGIKGVKYISEM-KQLRLLDITRNRIGKEGAKLLS 428
>gi|47097221|ref|ZP_00234784.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258612341|ref|ZP_05711837.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
gi|47014407|gb|EAL05377.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258611023|gb|EEW23631.1| cell wall surface anchor family protein [Listeria monocytogenes
F6900]
Length = 778
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 153/342 (44%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLMELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|298709085|emb|CBJ31033.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 573
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 140/324 (43%), Gaps = 43/324 (13%)
Query: 71 LQVLTKLEYLDLWGSQVSNRG-------AAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
L VL KLE + L S + N G + +L+ + L +G L + LE L
Sbjct: 268 LPVLPKLERVCLARSGIGNEGLSRLSAGSPLLRDLDLCGCVRLTESGAHTLSALQDLETL 327
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+LSNC + S +E K P G T +N LD N +
Sbjct: 328 DLSNCRVYSCVEELAQKLP-------GLTALN---------------LDRCNVGDTGVRA 365
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L+ + LE L+L+ + I D + +A + LR+LNL + AG+G LA L NL L
Sbjct: 366 LSSLTKLERLNLADTSITDAGMTHLAPL-TRLRDLNLFFCHITDAGLGPLAA-LSNLVRL 423
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L + D + ++ + L+ +D+ + I F G L L L L
Sbjct: 424 NLDTRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHG-----------LCRLPCLTTL 472
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+ +++D L+ LS K L L++ +N +T + + +L++L +L++ +T S
Sbjct: 473 EVCSGRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHVGTLTRLRSLNLSSCNITPSS 532
Query: 363 LGSFKPPRSLKLLDLHGGWLLTED 386
L S +L+ L + G L D
Sbjct: 533 LNSLTGLVNLESLSVFGCRLEMTD 556
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++LDL CV++T++G L ++ LE L LS + + L L L+ L+L V
Sbjct: 299 LRDLDLCGCVRLTESGAHTLSALQDLETLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV 358
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLE 121
D +R+L LTKLE L+L + +++ G L RL LNL + +T L +++L
Sbjct: 359 GDTGVRALSSLTKLERLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALS 418
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLA------GTTFINEREAFLYIETSLLSFLDVSN 175
NL +D+ G+ L ++ L + + A L+ L+V +
Sbjct: 419 --NLVRLNLDTRDVGDAGMVQLTRLRLLESLDVFSASITDFGVAHGLCRLPCLTTLEVCS 476
Query: 176 SSLS--RFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
L+ L+++K+L L++S + I V V + LR+LNLS+ + + +
Sbjct: 477 GRLTDRGLYHLSRVKSLTRLNVSQNFGITAAGVRHVGTL-TRLRSLNLSSCNITPSSLNS 535
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFI 267
L G L NLE LS+ G +++ + + +P+L+ +
Sbjct: 536 LTG-LVNLESLSVFGCRLEMTDLELLREKLPNLRVV 570
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLE 241
L + LE + L+ S IG++ + ++ LR+L+L R + +G L+ L +LE
Sbjct: 267 VLPVLPKLERVCLARSGIGNEGLSRLSAGSPLLRDLDLCGCVRLTESGAHTLSA-LQDLE 325
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L LS ++ +P L +++ ++ +T + AL +L LE
Sbjct: 326 TLDLSNCRVYSCVEELAQKLPGLTALNLDRCNV--------GDT----GVRALSSLTKLE 373
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
RLNL T ++DA + L+ L L+L +TD L L++LS L L++ + ++
Sbjct: 374 RLNLADTSITDAGMTHLAPLTRLRDLNLFFCHITDAGLGPLAALSNLVRLNLDTRDVGDA 433
Query: 362 GLGSFKPPRSLKLLDL 377
G+ R L+ LD+
Sbjct: 434 GMVQLTRLRLLESLDV 449
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 61
C+ LDLS C +TD G+ L ++ +LE L +GL + LS+ L L L
Sbjct: 81 CIVTLDLSSCTGLTDTGLSDLPALKSLESASLRRCSGLGTEATLCLSNSPGLETLSLAHC 140
Query: 62 PV-TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
P+ D + +L L++L L+L G + +S+ G L LA +LP S
Sbjct: 141 PLLDDAAVGNLAGLSRLRSLELEGCENISDEG------------LRLA----CRLP---S 181
Query: 120 LECLNLSNC---TIDSILEGNENKAPLAKISLA 149
L CLN S C T+D + + L +++L
Sbjct: 182 LTCLNASRCHGLTVDGLAGLEQAAGGLKRLNLG 214
>gi|46447569|ref|YP_008934.1| hypothetical protein pc1935 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401210|emb|CAF24659.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 504
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-----ETGLTADGIALLSSLQNLSV 55
+ LK L+LSRC K T AG+ HL ++ L+ L LS GL + G+A L L L
Sbjct: 351 LVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQH 410
Query: 56 LDLGGLPVTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW---- 108
L+L VTD L L L L+YLDL W +++ G A L L LNL+
Sbjct: 411 LNLSWCGVTDDELAHLTPLEALQYLDLSNCW--HLTDAGLAHLNPLIALQHLNLSKCDQL 468
Query: 109 --TGVTKLPNISSLECLNLSNCT 129
G+ L +++L+ LNLS C+
Sbjct: 469 TNAGLAHLIPLTALQHLNLSGCS 491
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 60/245 (24%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLS---SLQNLSVL 56
+ L+ LDL+ C +TDAG+ HL + L+ L LS G LT G+A LS +LQ+L++
Sbjct: 274 LVALQHLDLNYCYNLTDAGLAHLAPLVALKHLNLSGHGYLTDAGLAHLSPLTALQHLNLS 333
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDL------------------------------WGSQ 86
+ +TD L L+ L L+YL+L G+
Sbjct: 334 ECCNYKLTDAGLAHLRPLVALKYLNLSRCSKFTGAGLAHLRPLTALQHLNLSGCGGIGAG 393
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKA 141
+++ G A L+ L LNL+W GVT L + +L+ L+LSNC
Sbjct: 394 LASAGLAHLRPLTALQHLNLSWCGVTDDELAHLTPLEALQYLDLSNCW------------ 441
Query: 142 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMI 200
++ AG +N A ++ S ++N+ L+ LT AL+HL+LS S +
Sbjct: 442 ---HLTDAGLAHLNPLIALQHLNLSKCD--QLTNAGLAHLIPLT---ALQHLNLSGCSNL 493
Query: 201 GDDSV 205
DD +
Sbjct: 494 TDDGL 498
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRF- 225
L F N + + +L + AL+HLDL+ + D + +A + A L++LNLS +
Sbjct: 255 LYFRKCPNLTAAGLAYLRPLVALQHLDLNYCYNLTDAGLAHLAPLVA-LKHLNLSGHGYL 313
Query: 226 SSAGVGILAGHLPNLEILSLS---GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
+ AG+ L+ L L+ L+LS ++ D ++++ + +LK++++S + G
Sbjct: 314 TDAGLAHLSP-LTALQHLNLSECCNYKLTDAGLAHLRPLVALKYLNLSRCS-----KFTG 367
Query: 283 AETDLVLSLTALQNLN-----------------------HLERLNLEQTQVSDATLFPLS 319
A + LTALQ+LN L+ LNL V+D L L+
Sbjct: 368 AGLAHLRPLTALQHLNLSGCGGIGAGLASAGLAHLRPLTALQHLNLSWCGVTDDELAHLT 427
Query: 320 TFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 377
+ L +L L N LTD L L+ L L +L++ LTN+GL P +L+ L+L
Sbjct: 428 PLEALQYLDLSNCWHLTDAGLAHLNPLIALQHLNLSKCDQLTNAGLAHLIPLTALQHLNL 487
Query: 378 HGGWLLTEDAI 388
G LT+D +
Sbjct: 488 SGCSNLTDDGL 498
>gi|404406789|ref|YP_006689504.1| internalin I [Listeria monocytogenes SLCC2376]
gi|404240938|emb|CBY62338.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 1775
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENKITSI--SEITDLPRLSYLDVSVNNLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ T V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGD--LKKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 523 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 581 IHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 640
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 641 SYLRSLGTMDGVPKLRILDLQN----NYLNYNGTEGN----LSSLSDLTNLTELNLRNNV 692
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 693 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 728
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 380 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 437
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 438 LKENKITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVST-- 492
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 493 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 546
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 547 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 601
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 602 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 661
Query: 379 GGWL 382
+L
Sbjct: 662 NNYL 665
>gi|342181851|emb|CCC91330.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 421
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT----DIKGFIQ-QVGAETDL-- 287
GHLP + L+LSGT + D + +S+ SL+ ID+ D++ Q Q E D+
Sbjct: 33 GHLPRIHTLALSGTGVIDECLCGLSLSKSLRRIDLCGCLRIKDVEPLSQIQTLEEVDVSG 92
Query: 288 ----VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQL 342
V + AL L HL L T + D L LS + L+ L L N LT+V L
Sbjct: 93 CFPCVCGIGALGKLPHLRYLKATLTGIRDECLVRLSVSRCLVKLLLSNCERLTNV--QCL 150
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW------------LLTEDAILQ 390
+ ++ L L + D V G+G SLK LD+ G L E IL+
Sbjct: 151 ARITSLEELDLSDCVNVTEGIGDLGRLPSLKSLDISGTGTSDVDLCGICKSLCIEKLILK 210
Query: 391 FCKM 394
CK+
Sbjct: 211 RCKL 214
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 152/363 (41%), Gaps = 49/363 (13%)
Query: 4 LKELDLSRCVKVTDAG-MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-L 61
L+EL + V V + G + HL I TL LS TG+ + + LS ++L +DL G L
Sbjct: 15 LEELTIRDSVGVVNLGNIGHLPRIHTL---ALSGTGVIDECLCGLSLSKSLRRIDLCGCL 71
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ D+ L + LE +D+ G G L P L +L TG+ E
Sbjct: 72 RIKDV--EPLSQIQTLEEVDVSGCFPCVCGIGALGKLPHLRYLKATLTGIRD-------E 122
Query: 122 C---LNLSNCTIDSILEGNE---NKAPLAKIS------LAGTTFINEREAFLYIETSLLS 169
C L++S C + +L E N LA+I+ L+ + E L SL S
Sbjct: 123 CLVRLSVSRCLVKLLLSNCERLTNVQCLARITSLEELDLSDCVNVTEGIGDLGRLPSLKS 182
Query: 170 FLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRF 225
LD+S + S C + + +E L L + D V C+ L+++N+
Sbjct: 183 -LDISGTGTSDVDLCGICKSLCIEKLILKRCKLITD----VFCLQNLPTLQHVNIGECSN 237
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
G G+ + LP L L + T + D + +SM SL ++I A
Sbjct: 238 IIEGFGVFS-VLPELRTLYVHHTAVTDNDLRAISMSNSLVSLNI-------------ASC 283
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+ ++ L +L LE +N+ + + L +S+ L L + ++ D L +++
Sbjct: 284 SQIADVSCLSDLKTLEEININLCEGINKGLVEVSSLPNLRSLDACSTAVDDNCLEKIAGS 343
Query: 346 SKL 348
+ L
Sbjct: 344 TTL 346
>gi|290892518|ref|ZP_06555511.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
gi|290557827|gb|EFD91348.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J2-071]
Length = 1775
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENKITSI--SEITDLPRLSYLDVSVNNLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ T V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGD--LKKLPLLEWLNVSSNRLTDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 523 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 581 IHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 640
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 641 SYLRSLGTMDGVPKLRILDLQN----NYLNYNGTEGN----LSSLSDLTNLTELNLRNNV 692
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 693 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 728
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 380 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 437
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 438 LKENKITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLTDVST-- 492
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 493 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 546
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 547 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 601
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 602 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 661
Query: 379 GGWL 382
+L
Sbjct: 662 NNYL 665
>gi|300691654|ref|YP_003752649.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299078714|emb|CBJ51373.1| leucine-rich-repeat type III effector protein (GALA7) [Ralstonia
solanacearum PSI07]
Length = 612
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 130/289 (44%), Gaps = 35/289 (12%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS---SLQNLSVLDL 58
L+ LDL C + A +++L + LE L + + G LL+ SL+ L+V D
Sbjct: 170 LRHLDLGECTGEAKSPAAIEYLAKL-PLESLNVKGAQIGDRGAQLLAANLSLKKLNVADG 228
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
G ++++ R L LE LD+ G+++ RGA L + L L GVT P I
Sbjct: 229 G---ISEVGARKLAAHPSLESLDMSGNRIDARGAEHLATSQSIETLRLCCCGVTD-PGIQ 284
Query: 119 S------LECLNLSNCTIDSILEGNEN--KAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+ L+ L++S I NE+ +A A SL R+ +++
Sbjct: 285 ALASNRRLKSLDVSGNNI------NEDALRALAANPSLTSLDVGYNRQNARGGPQTVVQG 338
Query: 171 LDVSNSSLSRFCFLTQMKA----LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
+D++ F ++A LE L + + + D +VEM+A + +L+L N
Sbjct: 339 VDMA------FALAMGLRARGKPLESLKVDGNALNDRAVEMLALPMIEIASLSLKNNLIG 392
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
G LAG+ P LE L L+ +IDD +S SLK + + N +K
Sbjct: 393 PDGARHLAGN-PVLESLDLTRNKIDDEGAEALSRSRSLKTLSVLNCGVK 440
>gi|66807643|ref|XP_637544.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
gi|60465980|gb|EAL64047.1| hypothetical protein DDB_G0286583 [Dictyostelium discoideum AX4]
Length = 722
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 28/288 (9%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK LDL R ++TD G+++L + LE+L+L TG T G+ALL +L L LD+ +
Sbjct: 376 LKTLDL-RDNRITDVGIRNLKGLLNLEELYLGSTGCTDIGLALLCNLLKLKTLDVSKCNI 434
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL--------------SFLNLAWT 109
TD + + T+L++L L G+QV+++G + P L S LA+
Sbjct: 435 TDSSMDIICRFTELKFLYLSGTQVTDKGINTISKLPNLIQLYVSNCLRITNQSLFFLAYL 494
Query: 110 GVTKLPNISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 167
G T L+ L++ I + ++ K L + L G IN+ S
Sbjct: 495 GKT-------LKLLDIFQTKIGLNGFIQLRMFKQ-LQFLVLPGRDSINDATIGHLNSLSN 546
Query: 168 LSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L LD+S+ ++S LT +++L L LS++ I D+S+ +L L+L+ T +
Sbjct: 547 LRKLDLSDYRNISDLSPLTNLQSLTELLLSNTKISDNSIINSIKTMDSLEVLSLNKTEVT 606
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
+ GV L L LSLS T+ID ++ Y+ M SL+ +DIS DI
Sbjct: 607 TEGVSQLVNLN--LTSLSLSSTKIDGKSLYYLGQMKSLQKLDISFNDI 652
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 34/249 (13%)
Query: 8 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-LPVTDL 66
D+S+C +TD+ M + + L+ L+LS T +T GI +S L NL L + L +T+
Sbjct: 428 DVSKC-NITDSSMDIICRFTELKFLYLSGTQVTDKGINTISKLPNLIQLYVSNCLRITNQ 486
Query: 67 VLRSLQVLTK-LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISS 119
L L L K L+ LD++ +++ G L+MF +L FL L + L ++S+
Sbjct: 487 SLFFLAYLGKTLKLLDIFQTKIGLNGFIQLRMFKQLQFLVLPGRDSINDATIGHLNSLSN 546
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGT-----TFINEREAFLYIETSLLSFLDVS 174
L L+LS+ S L N L ++ L+ T + IN + +E L+ +V+
Sbjct: 547 LRKLDLSDYRNISDLSPLTNLQSLTELLLSNTKISDNSIINSIKTMDSLEVLSLNKTEVT 606
Query: 175 NSSLSRFC--------------------FLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
+S+ +L QMK+L+ LD+S + I D+S++ + +
Sbjct: 607 TEGVSQLVNLNLTSLSLSSTKIDGKSLYYLGQMKSLQKLDISFNDITDNSMDYLKPIADT 666
Query: 215 LRNLNLSNT 223
L +++L T
Sbjct: 667 LSHIDLRGT 675
>gi|87309591|ref|ZP_01091725.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
gi|87287355|gb|EAQ79255.1| probable G protein-coupled receptor [Blastopirellula marina DSM
3645]
Length = 328
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 43/225 (19%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--------- 234
L +++L+ L+L+ S + D S+E++ + LR+L L T +SAGV LA
Sbjct: 88 LVMLQSLQRLNLNQSGVTDKSLEIMGAL-PELRSLYLERTAVTSAGVAALASCEKLEELM 146
Query: 235 --------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQ 279
G LP L +LSLS T I D + ++ +P LK + + +T + G
Sbjct: 147 LTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTAVTGEGFA 206
Query: 280 QVGAETDLVL-----------SLTALQNLNHLERLNLEQTQVSDATLFP-----LSTFK- 322
+ + TDL L ++ L++ +LERL L +T ++D L P L F
Sbjct: 207 MLKSSTDLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTDE-LLPEFIDTLIRFNP 265
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
L L++ +TD SL L L++L +L++ D T G+F+
Sbjct: 266 HLRGLAIMEVPITDNSLTPLKRLAELPDLAVVDFRETGVTRGAFQ 310
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L +L+ L+L+ + + D ++ M +P L+ + + T + + AL +
Sbjct: 91 LQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTS------------AGVAALAS 138
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
LE L L + + D L + L LSL +TD + L SL L L +RD
Sbjct: 139 CEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDT 198
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+T G K L+L+DL
Sbjct: 199 AVTGEGFAMLKSSTDLRLIDL 219
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 32/131 (24%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TDAGM HL S+ L+ L+L +T +T +G A+L S +L ++DL + + +L+
Sbjct: 176 ITDAGMFHLQSLPHLKTLYLRDTAVTGEGFAMLKSSTDLRLIDLSDNSINRSTIETLRSF 235
Query: 75 TKLEYLDLWGSQVSN-----------------RGAAVLKM---------------FPRLS 102
LE L L + +++ RG A++++ P L+
Sbjct: 236 PNLERLYLGRTSLTDELLPEFIDTLIRFNPHLRGLAIMEVPITDNSLTPLKRLAELPDLA 295
Query: 103 FLNLAWTGVTK 113
++ TGVT+
Sbjct: 296 VVDFRETGVTR 306
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+L++ VTD ++ + ++ L L+L T +T+ G+A L+S + L L L +
Sbjct: 94 LQRLNLNQS-GVTDKSLEIMGALPELRSLYLERTAVTSAGVAALASCEKLEELMLTECAI 152
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNIS 118
D L ++ L L L L + +++ G L+ P L L L T VT L + +
Sbjct: 153 QDDALETIGQLPALTLLSLSETPITDAGMFHLQSLPHLKTLYLRDTAVTGEGFAMLKSST 212
Query: 119 SLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINE 156
L ++LS+ +I+ S +E + L ++ L T+ +E
Sbjct: 213 DLRLIDLSDNSINRSTIETLRSFPNLERLYLGRTSLTDE 251
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
++TD HL+ + +L++L L+++G+T + ++ +L L L L VT + +L
Sbjct: 78 ARMTDNAASHLVMLQSLQRLNLNQSGVTDKSLEIMGALPELRSLYLERTAVTSAGVAALA 137
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
KLE L L + + + P L+ L+L+ T +T
Sbjct: 138 SCEKLEELMLTECAIQDDALETIGQLPALTLLSLSETPIT 177
>gi|325109499|ref|YP_004270567.1| hypothetical protein Plabr_2946 [Planctomyces brasiliensis DSM
5305]
gi|324969767|gb|ADY60545.1| leucine-rich repeat cysteine-containing subtype [Planctomyces
brasiliensis DSM 5305]
Length = 381
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L++L +S+ +++ G++ + +S LE+L +SE + L+ D I+ LS L L+ L+L +P
Sbjct: 224 LRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRVP 283
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSL 120
++D + L LTKL +L+L +Q+S+ G + LK L FL+L T ++ LP +S L
Sbjct: 284 ISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSEL 343
Query: 121 ECLN 124
+ L+
Sbjct: 344 KSLD 347
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 33/305 (10%)
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI- 133
+D G +VS L P+L L N + + S LE L+L C + +
Sbjct: 79 VDFIGKEVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAG 138
Query: 134 ---LEGNENKAPLAKISLAGTTFIN----EREAFL-YIETSLLSFLDVSNSSLSRFCFLT 185
L G E L +G T ++ E A L ++ L FL +S L + LT
Sbjct: 139 LAHLVGLEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLT 198
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILS 244
++ L L+S+++GD+ ++ ++ LR L +S ++ S G+ ++ L LE L
Sbjct: 199 DLR---ELYLASTLVGDEDLKALSQF-PELRKLRVSKLSQLSGQGIQEIS-QLSKLEELD 253
Query: 245 LS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+S + + + IS +S + L +++ I G E L L L L
Sbjct: 254 VSEDSSLSNDDISSLSKLTKLTKLNLWRVPIS----DAGVEH--------LAPLTKLTWL 301
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
NL+ TQ+SDA L L KEL L L + +++ L QLS L L L + + G+
Sbjct: 302 NLDNTQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQEGV 361
Query: 364 GSFKP 368
+P
Sbjct: 362 DKLQP 366
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 15/274 (5%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+V+ ++ L + L L L E+ D + + L LDL PV++ L L
Sbjct: 85 EVSPEALEALAKLPKLRSLLLRESNAGDDALIAVGKCSQLENLDLRECPVSNAGLAHLVG 144
Query: 74 LTKLEYLDLWG----SQVSNRGAAVLKMFPRLS-----FLNLAWTGVTKLPNISSLECLN 124
L KL+ L L G + V + G + P+L FL ++ G+ +L ++ L L
Sbjct: 145 LEKLKALRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELY 204
Query: 125 LSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS-NSSLSR-- 180
L++ + D L+ L K+ ++ + ++ + + S L LDVS +SSLS
Sbjct: 205 LASTLVGDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDD 264
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L+++ L L+L I D VE +A + L LNL NT+ S AG+ L + L
Sbjct: 265 ISSLSKLTKLTKLNLWRVPISDAGVEHLAPL-TKLTWLNLDNTQLSDAGLSTLK-EMKEL 322
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
+ L L TQI + + +S + SL + ++ T +
Sbjct: 323 KFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAV 356
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L ++ L L L S GDD++ V C + L NL+L S+AG+ L G L L+
Sbjct: 94 LAKLPKLRSLLLRESNAGDDALIAVGKC--SQLENLDLRECPVSNAGLAHLVG-LEKLKA 150
Query: 243 LSLSG----TQIDDYAISYMSMMPSLKFIDISNTDIKG-FIQQVGAETDL---------- 287
L LSG T +DD + ++ +P LK + + I G +QQ+ TDL
Sbjct: 151 LRLSGQSGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLASTLV 210
Query: 288 -----------------------VLSLTALQNLNHLERLNL----EQTQVSDATLFPLST 320
LS +Q ++ L +L E + +S+ + LS
Sbjct: 211 GDEDLKALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSK 270
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+L L+L ++D + L+ L+KLT L++ + L+++GL + K + LK L L
Sbjct: 271 LTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHL 327
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 34/242 (14%)
Query: 10 SRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 69
S V D GM+ + + L+ L L ++ DG+ L L +L L L V D L+
Sbjct: 157 SGATTVDDGGMESVAKLPQLKVLALDFLWISGDGLQQLKPLTDLRELYLASTLVGDEDLK 216
Query: 70 SLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLN------LAWTGVTKLPNISSLEC 122
+L +L L + SQ+S +G + +L L+ L+ ++ L ++ L
Sbjct: 217 ALSQFPELRKLRVSKLSQLSGQGIQEISQLSKLEELDVSEDSSLSNDDISSLSKLTKLTK 276
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR-- 180
LNL I G E+ APL K L++L++ N+ LS
Sbjct: 277 LNLWRVPISDA--GVEHLAPLTK----------------------LTWLNLDNTQLSDAG 312
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L +MK L+ L L S+ I + + ++ + +L L ++ T + GV L LP+
Sbjct: 313 LSTLKEMKELKFLHLGSTQISNAGLPQLSEL-KSLDKLVVTRTAVNQEGVDKLQPELPDT 371
Query: 241 EI 242
EI
Sbjct: 372 EI 373
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L +L+L R V ++DAG++HL ++ L L L T L+ G++ L ++ L L LG
Sbjct: 271 LTKLTKLNLWR-VPISDAGVEHLAPLTKLTWLNLDNTQLSDAGLSTLKEMKELKFLHLGS 329
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 101
+++ L L L L+ L + + V+ G V K+ P L
Sbjct: 330 TQISNAGLPQLSELKSLDKLVVTRTAVNQEG--VDKLQPEL 368
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 59/113 (52%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L+ELD+S +++ + L ++ L KL L ++ G+ L+ L L+ L+L
Sbjct: 246 LSKLEELDVSEDSSLSNDDISSLSKLTKLTKLNLWRVPISDAGVEHLAPLTKLTWLNLDN 305
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
++D L +L+ + +L++L L +Q+SN G L L L + T V +
Sbjct: 306 TQLSDAGLSTLKEMKELKFLHLGSTQISNAGLPQLSELKSLDKLVVTRTAVNQ 358
>gi|72385469|ref|XP_846402.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366571|emb|CAB95333.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 198/440 (45%), Gaps = 77/440 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C VTDA + ++ LE+L LS +T GI L L L +LDL G+PV
Sbjct: 305 LSKLSVSECNNVTDA--TPISQLAALEELNLSNCHITK-GIGTLGMLLRLRILDLSGVPV 361
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ PR
Sbjct: 362 EDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPR 421
Query: 101 LSFLNLAWTGVTKLPNISS------LECLNLSNC----------TIDSILEGNENKAP-- 142
L L++ +++ P++ S L ++L NC +I ++ E N K
Sbjct: 422 LRILHMKDVHLSE-PSLDSVGTGGLLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKCADI 480
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
++ + GT Y+ +L+ +V SSL F + K+L L L S G
Sbjct: 481 ISGVGCLGT--------LPYLR--VLNVKEVHISSLD-FIGIGASKSLLQLTL-ESFTGL 528
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
+VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++ + +
Sbjct: 529 SNVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLRSLCLSQ 586
Query: 263 SLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQV 310
++ +++S+ T++ I + A +L LS A++ L L L T +
Sbjct: 587 TVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCIRINAGWEAIEKLQQLHVAILSNTHI 645
Query: 311 SDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+D + S K L+ L L + L DV+ LS+++ L L++ GL
Sbjct: 646 TDRDISHFSKCKNLVTLDLSFCNKLLDVT--TLSNITTLEELNLDSCSNIRKGLSVLGEL 703
Query: 370 RSLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 704 PRLCVLNIKGVQL--EDSVI 721
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 160/373 (42%), Gaps = 76/373 (20%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TGL+ + L+++ L L L G D + L L +L+ LDL G+ N L
Sbjct: 526 TGLS--NVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLC 583
Query: 97 MFPRLSFLNLA--WTGVTKLPNISSLECLN---LSNCT-IDSILEGNENKAPLAKISLAG 150
+ + LNL+ W +T + +ISSLE LN LSNC I++ E E L +++
Sbjct: 584 LSQTVVSLNLSHCWK-MTNVSHISSLEALNELNLSNCIRINAGWEAIEKLQQL-HVAILS 641
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFC-------FLTQMKALEHLDLSSSMIGDD 203
T I +R+ + + L LD+S FC L+ + LE L+L S
Sbjct: 642 NTHITDRDISHFSKCKNLVTLDLS------FCNKLLDVTTLSNITTLEELNLDSC----- 690
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
+N+R G+ +L G LP L +L++ G Q++D I + S
Sbjct: 691 ---------SNIR-----------KGLSVL-GELPRLCVLNIKGVQLEDSVIGSLGNGNS 729
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN------------------HLERLNL 305
F+ +S + KGF G T L +L L+ LN L L+L
Sbjct: 730 --FVRLSLENCKGF----GGVTPLS-NLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 782
Query: 306 EQTQVSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
+TQV D +L + T L+ L+L + S+ ++SL+ L L+I + SG
Sbjct: 783 GRTQVDDNSLENICTCSSPLVSLNLSHCKKI-TSISAIASLTALEELNIDNCCNVTSGWN 841
Query: 365 SFKPPRSLKLLDL 377
F L++ L
Sbjct: 842 VFGTLHQLRVATL 854
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 160/393 (40%), Gaps = 72/393 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L R + + +HL S+ TLE+L +++T + I +S L NL L+L +
Sbjct: 234 LKRLRL-RSNNIDNNDARHLFSVGTLEELAITDT-MQLTNIREISRLTNLKCLELNSTNI 291
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D + + KL L + S+ +N T T + +++LE L
Sbjct: 292 DDSCVEEISACVKLSKLSV--SECNN------------------VTDATPISQLAALEEL 331
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
NLSNC I T I L + LS + V ++ L C
Sbjct: 332 NLSNCHI--------------------TKGIGTLGMLLRLRILDLSGVPVEDNCLKDLC- 370
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+LE L++S + D + + LNL+ R + G+G++ LP L IL
Sbjct: 371 --DCGSLERLNISYCIQLTDINPLSNATA--IEELNLNGCRRITRGIGVVWA-LPRLRIL 425
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQVGAETDL 287
+ + + ++ S+ + +S + GF IQ+ D+
Sbjct: 426 HMKDVHLSEPSLD--SVGTGGLLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---DI 480
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLS 346
+ + L L +L LN+++ +S + K L+ L+L S T +S + L+++
Sbjct: 481 ISGVGCLGTLPYLRVLNVKEVHISSLDFIGIGASKSLLQLTLE--SFTGLSNVEALANIL 538
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L LS+ ++G+G LK+LDL G
Sbjct: 539 TLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 571
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 62/144 (43%), Gaps = 31/144 (21%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD-------- 65
++TDA L +I++LE+L L + G T +G L L L LDLG ++D
Sbjct: 1169 ELTDA--TPLSNITSLEELSLRDCGDTLEGAWTLGKLPRLRSLDLGLSDISDNTLDEICL 1226
Query: 66 ------LVLR---------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 110
L LR S+ LT LE L+L G G L PRL LNL T
Sbjct: 1227 SRFITSLNLRYNFKLTDISSISNLTALEELNLSGCHRITSGWEALSELPRLRVLNLESTS 1286
Query: 111 VTK------LPNISSLECLNLSNC 128
VT + SL LNL +C
Sbjct: 1287 VTTRDGGYYISRCKSLVTLNLESC 1310
>gi|46445682|ref|YP_007047.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399323|emb|CAF22772.1| hypothetical protein pc0048 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 531
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLG 59
+ L+ L+LS C +TDAG+ HL + L+ L LS D G+A L L L L+L
Sbjct: 370 LIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGCAFITDAGLAHLKPLVALQYLNLS 429
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
G +TD L L L L++LDL W + ++N G L L LNL+ G+
Sbjct: 430 GCAFITDAGLAHLTPLVTLKHLDLSWCNSLTNAGLERLASLVALQHLNLSGCIYLTEAGL 489
Query: 112 TKLPNISSLECLNLSNC 128
T L ++++L+ LNL++C
Sbjct: 490 THLTSLTNLQQLNLNHC 506
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 29 LEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGS 85
+EKL SE D L L + +NL L L +TD L SL LT L+YL+L
Sbjct: 298 IEKLNFSENAHLTDAHLLALKNCKNLKALHLQACHNLTDDGLASLTSLTNLQYLNLSCCD 357
Query: 86 QVSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNEN 139
+++N+G A K L +LNL+ G+ L + +L+ LNLS C
Sbjct: 358 KLTNKGLAHFKSLIALQYLNLSGCAFITDAGLAHLKPLVALQYLNLSGC----------- 406
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SS 198
A I+ AG + A Y+ S +F ++++ L+ LT + L+HLDLS +
Sbjct: 407 ----AFITDAGLAHLKPLVALQYLNLSGCAF--ITDAGLAH---LTPLVTLKHLDLSWCN 457
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRF-SSAGVGILAGHLPNLEILSLSGTQ 249
+ + +E +A + A L++LNLS + + AG+ L L NL+ L+L+ +
Sbjct: 458 SLTNAGLERLASLVA-LQHLNLSGCIYLTEAGLTHLTS-LTNLQQLNLNHCE 507
>gi|440717669|ref|ZP_20898151.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
gi|436437289|gb|ELP30945.1| hypothetical protein RBSWK_05211 [Rhodopirellula baltica SWK14]
Length = 442
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 56/352 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DAGM++L S++ L++L L++T +T + + + +L L L VTD L L L
Sbjct: 107 IDDAGMENLKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGL 166
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+KL +DL + + + G L L + L + VT
Sbjct: 167 SKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKSKVTD--------------------- 205
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
EG APL S+ F Y T ++ ++ L Q LE+L
Sbjct: 206 EGLVKLAPLPLKSIN----------FNYCTT-------INGPTMK---MLGQTPTLENLQ 245
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
S I D S+ + + + L+ L + + G+ +AG+ L L + +DD
Sbjct: 246 GDYSKINDASMAELKGL-SKLKRLRIRGCDVTGEGIQHIAGN-KALARFELRDSSVDDDG 303
Query: 255 ISYMSMMPSLKFIDISNTDIKG--FIQQVGAETDLVL-----------SLTALQNLNHLE 301
+ +S +P++ +DIS + I Q+G L +L +L +LE
Sbjct: 304 LKVISQLPAVTHVDISECRLASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLE 363
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LNL+ T V+D +L L +L L++ L D S +L+ L L ++++
Sbjct: 364 ELNLKSTAVTDESLPVLMKMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMNV 415
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L+ +TD +K + +++L+ L+L TG+T +G+ LL+ L L +DL +
Sbjct: 121 LKRLTLADTA-ITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNI 179
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS----- 118
D + SL + L + L S+V++ G L P L +N + P +
Sbjct: 180 GDAGMDSLAKIKTLIDVKLEKSKVTDEGLVKLAPLP-LKSINFNYCTTINGPTMKMLGQT 238
Query: 119 -SLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+LE L I D+ + + + L ++ + G E + +L F ++ +S
Sbjct: 239 PTLENLQGDYSKINDASMAELKGLSKLKRLRIRGCDVTGEGIQHIAGNKALARF-ELRDS 297
Query: 177 SLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG---------------------- 212
S+ ++Q+ A+ H+D+S + S E +A +G
Sbjct: 298 SVDDDGLKVISQLPAVTHVDISECRLA--SPEGIAQLGKLIGLTYLGLWETKTNDETLAG 355
Query: 213 ----ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID 268
NL LNL +T + + +L + L+ L+++GTQ+ D + ++ +P+LK ++
Sbjct: 356 FGDLVNLEELNLKSTAVTDESLPVLM-KMTKLKTLNVAGTQLGDDSFLELAKLPNLKSMN 414
Query: 269 ISNTDIKGF 277
++NT I GF
Sbjct: 415 VANTSI-GF 422
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ + +D+S C + G+ L + L L L ET + +A L NL L+L
Sbjct: 310 LPAVTHVDISECRLASPEGIAQLGKLIGLTYLGLWETKTNDETLAGFGDLVNLEELNLKS 369
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
VTD L L +TKL+ L++ G+Q+ + SFL LA KLPN+ S+
Sbjct: 370 TAVTDESLPVLMKMTKLKTLNVAGTQLGDD-----------SFLELA-----KLPNLKSM 413
Query: 121 ECLNLS 126
N S
Sbjct: 414 NVANTS 419
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L++L +L+RL L T ++D TL + L L LR +TD L L+ LSKL + +
Sbjct: 115 LKSLANLKRLTLADTAITDQTLKTVGEMTSLDALFLRRTGVTDEGLELLTGLSKLRAIDL 174
Query: 354 RDAVLTNSGLGSFKPPRSL 372
R+ + ++G+ S ++L
Sbjct: 175 RNTNIGDAGMDSLAKIKTL 193
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+PN + +G IDD + + + +LK + +++T I TD +L +
Sbjct: 94 IPNTTEATFNGPGIDDAGMENLKSLANLKRLTLADTAI----------TDQ--TLKTVGE 141
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L+ L L +T V+D L L+ +L + LRN ++ D + L+ + L ++ + +
Sbjct: 142 MTSLDALFLRRTGVTDEGLELLTGLSKLRAIDLRNTNIGDAGMDSLAKIKTLIDVKLEKS 201
Query: 357 VLTNSGLGSFKP 368
+T+ GL P
Sbjct: 202 KVTDEGLVKLAP 213
>gi|386052609|ref|YP_005970167.1| internalin-I [Listeria monocytogenes Finland 1998]
gi|346645260|gb|AEO37885.1| internalin-I [Listeria monocytogenes Finland 1998]
Length = 1778
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL +L N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|404412424|ref|YP_006698011.1| internalin I [Listeria monocytogenes SLCC7179]
gi|404238123|emb|CBY59524.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 1783
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL +L N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|325182005|emb|CCA16458.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 708
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 168/389 (43%), Gaps = 63/389 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALL-SSLQNLSVLDLGGL 61
L+ L LS C +T+ G++HL + L++L+L+ ++ +S NL LDL
Sbjct: 338 LQNLHLSGCKWITEKGLQHLNGLFGLKRLYLARCVNVSNQAFRFFPTSFPNLVELDLSHC 397
Query: 62 PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
++D+ L L ++ L L G S+++ +G ++ L ++S L
Sbjct: 398 SISDIALHFTGRLREIHSLMLKGCSRITTKG-------------------LSHLGSLSKL 438
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L++ C + L ++ L + LA T F E +A + L LD+ +++
Sbjct: 439 RRLDVRYCKHVAGL--SKEWTQLDMLKLACTEF-KEADASILATMKTLHELDLRCCLVAK 495
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-------- 230
CF ++ + +L L ++ + + D+S+ M+ L+ L++S T + +G
Sbjct: 496 GCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKLQMLDVSCTEVTDSGTMEIEMLGE 555
Query: 231 ---------GIL------AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
GI G L L L+L + D + + + L+ +DI +
Sbjct: 556 LSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTDEGVEALKRLDKLQDLDICS---- 611
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASL 334
G + G + AL L L LNL Q ++ ++ L +L L+L N +
Sbjct: 612 GGVGHRGVK--------ALSQLKRLRSLNLSQNKEIRSQSVVHLEALTKLRFLNLSNTGI 663
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
T LH L +L +L +LS+ VL +S +
Sbjct: 664 TSSCLHNLFALKELESLSVYGVVLESSQI 692
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 114/275 (41%), Gaps = 51/275 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG-IALLSSLQNLSVLDLG 59
M L ELDL RC V + +++L +L ++ET LT + I L SL+ L +LD+
Sbjct: 480 MKTLHELDL-RCCLVAKGCFSFVSHLNSLVRLCVAETALTDESLIMLCKSLEKLQMLDVS 538
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
VTD +++L +L L L ++NR + +L+ LNL VT
Sbjct: 539 CTEVTDSGTMEIEMLGELSELHLDTPGITNRSLERVGKLKKLARLNLFAASVTD------ 592
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
EG E L K L LD+ + +
Sbjct: 593 ---------------EGVEALKRLDK----------------------LQDLDICSGGVG 615
Query: 180 RFCF--LTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L+Q+K L L+LS + I SV + + LR LNLSNT +S+ + L
Sbjct: 616 HRGVKALSQLKRLRSLNLSQNKEIRSQSVVHLEAL-TKLRFLNLSNTGITSSCLHNLFA- 673
Query: 237 LPNLEILSLSGTQIDDYAISYMSM-MPSLKFIDIS 270
L LE LS+ G ++ I + +P LK + S
Sbjct: 674 LKELESLSVYGVVLESSQIDELQENLPHLKVLRCS 708
>gi|16802378|ref|NP_463863.1| hypothetical protein lmo0333 [Listeria monocytogenes EGD-e]
gi|386049260|ref|YP_005967251.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404282763|ref|YP_006683660.1| internalin I [Listeria monocytogenes SLCC2372]
gi|405757319|ref|YP_006686595.1| internalin I [Listeria monocytogenes SLCC2479]
gi|81849931|sp|Q8YA32.1|INLI_LISMO RecName: Full=Internalin-I; Flags: Precursor
gi|16409711|emb|CAC98412.1| lmo0333 [Listeria monocytogenes EGD-e]
gi|346423106|gb|AEO24631.1| internalin-I [Listeria monocytogenes FSL R2-561]
gi|404232265|emb|CBY53668.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235201|emb|CBY56603.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 1778
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL +L N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|284800621|ref|YP_003412486.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284993807|ref|YP_003415575.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
gi|284056183|gb|ADB67124.1| hypothetical protein LM5578_0368 [Listeria monocytogenes 08-5578]
gi|284059274|gb|ADB70213.1| hypothetical protein LM5923_0367 [Listeria monocytogenes 08-5923]
Length = 1778
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL +L N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|407424780|gb|EKF39143.1| hypothetical protein MOQ_000636 [Trypanosoma cruzi marinkellei]
Length = 936
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 194/447 (43%), Gaps = 68/447 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL-WLSETGLTA-DGIALLSSLQNLSVLDLGGL 61
L++LDLS +VT+ GM +S L+KL LS G +G+ L +L L LDLG
Sbjct: 375 LRDLDLSY-TQVTEEGMHR--DVSRLKKLSRLSLEGCRKIEGLQWLRALTQLRELDLGYS 431
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
VTD L +L+ +L LDL W ++++ V + L LNL T VT L
Sbjct: 432 SVTDDSLTALRFCPELVRLDLQWCGRITSLKCLVGALCDSLRELNLTETSVTDEGLVPLK 491
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ ++LE ++L C S + N L ++ + T N L +L +
Sbjct: 492 DFAALEWISLEGCGAVSDVNVLCNLTRLREVDVGRTRVTNGGVLSLSQCQALRAMRMRQC 551
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
L+ FL ++ LE +DLS + ++ + + C +LR L L + S V L G
Sbjct: 552 YRLTDASFLGALQQLEEVDLSDCPVTNEGIAAL-CGARSLRKLQLQSCHAVS-DVNFLGG 609
Query: 236 HLPNLEILSLSGTQIDD----------------------YAISYMS---MMPSLKFIDIS 270
L +L +L L T +D+ +++ + + +P LK +D+S
Sbjct: 610 -LEHLMLLDLHHTTVDEAGSVGLAQCPQLTTLIMHSVLVHSLQHWNAALFLPRLKRLDLS 668
Query: 271 NTDIKG----FIQQVGA-ETDLVLSLTALQNLNHLERLNLEQTQ------VSDATLFPLS 319
T + F++ ET LSL +N+ HL+ L ++ + ++ P
Sbjct: 669 TTKVTSDALSFLRMCPILET---LSLRGCKNITHLDFLIIQTSSGVGVCGIAPHDAEPHD 725
Query: 320 TFKELI---------------HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
T ++I ++++ + ++ + + +L L++ D +TN GL
Sbjct: 726 TLVDIIAGKEKNPDDGPSPIENMTINDGAIKSTAAAPVVGRHRLRELTLSDTGVTNDGLR 785
Query: 365 SFKPPRSLKLLDLHGGWLLTEDAILQF 391
+ + L+ L L +TE A+L++
Sbjct: 786 ALQYCPGLERLRLAHCKNVTEVAVLRW 812
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 353 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMHRDVSRLKKLSRLSLEGCR-KI 411
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G+ L L L L L + + D +++ + P L +D +Q G T L
Sbjct: 412 EGLQWLRA-LTQLRELDLGYSSVTDDSLTALRFCPELVRLD---------LQWCGRITSL 461
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 346
+ AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 462 KCLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLT 517
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+L + + +TN G+ S ++L+ + + + LT+ + L
Sbjct: 518 RLREVDVGRTRVTNGGVLSLSQCQALRAMRMRQCYRLTDASFL 560
>gi|317420071|emb|CBN82107.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 889
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 69/369 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALL--SSLQNLSVLDLGGL 61
L+ L+L+ C K+TD+ ++H+ + +L L L +T +T G+ L S+ LS L L
Sbjct: 547 LQYLNLASCSKLTDSCLQHITGLKSLCFLSLDQTKVTDAGMVLYLQSAPSCLSQLSLNQT 606
Query: 62 PVTDLVLRSLQV-LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
VT+ L L + +L L + ++V + + L L LNL TGVT+ SSL
Sbjct: 607 AVTEASLVVLPTCVPQLRLLSIKQTKVKD--VSALARLSNLQTLNLDVTGVTE----SSL 660
Query: 121 ECLN----LSNCTIDSILEGNENKA-------PLAKISLAGTTFINEREAFLYIETSLLS 169
E L+ LS+ ++ I + N+A L +++L G + + SLL
Sbjct: 661 EHLSSHPTLSSLSLAGIPVADGNQALQIISDLRLTQLTLPGRHTVTDSGLSFLSRLSLLL 720
Query: 170 ------FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
+ V++ +S+ +T++K L LS++ + D + + + L+ L L T
Sbjct: 721 ELDLTDYTQVTDQGVSQLSTMTRLK---KLSLSNTQVTDAGLPSLRGL-QELQELCLDRT 776
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+S GV L LP+L++L L+ TQ+ D + +G I+
Sbjct: 777 AVTSRGVADLITCLPHLQVLGLASTQVGDTVVR------------------RGVIR---- 814
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
N L +LNL +T+++D L L + +HL+ N T VSL ++
Sbjct: 815 -------------CNQLVKLNLSRTRITDHGLKCL----KHMHLAQVNLDGTGVSLIGIA 857
Query: 344 SLSKLTNLS 352
+L TN+S
Sbjct: 858 NLLSFTNIS 866
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 35/281 (12%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
TC+ +L L + + L +S L+ L L TG+T + LSS LS L L G+
Sbjct: 618 TCVPQLRLLSIKQTKVKDVSALARLSNLQTLNLDVTGVTESSLEHLSSHPTLSSLSLAGI 677
Query: 62 PVTDLVLRSLQVLT--KLEYLDLWGSQV-------SNRGAAVLKMFPRLSFLNLAWTGVT 112
PV D ++LQ+++ +L L L G ++L + + GV+
Sbjct: 678 PVAD-GNQALQIISDLRLTQLTLPGRHTVTDSGLSFLSRLSLLLELDLTDYTQVTDQGVS 736
Query: 113 KLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+L ++ L+ L+LSN + D+ L SL G + E L ++ + ++
Sbjct: 737 QLSTMTRLKKLSLSNTQVTDAGLP-----------SLRGLQELQE----LCLDRTAVTSR 781
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
V++ +T + L+ L L+S+ +GD V L LNLS TR + G+
Sbjct: 782 GVAD-------LITCLPHLQVLGLASTQVGDTVVRRGVIRCNQLVKLNLSRTRITDHGLK 834
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L H+ +L ++L GT + I+ + ++ I SNT
Sbjct: 835 CLK-HM-HLAQVNLDGTGVSLIGIANLLSFTNISSIRASNT 873
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 57/317 (17%)
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
T+ +LR L+ T L++L L S +++ G ++ +L +LNLA C
Sbjct: 509 TNELLRQLRAFTALKHLSLVNSPLITDSGLSIFSSLAKLQYLNLA-------------SC 555
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
L+ DS L+ L +SL T + + LY++++
Sbjct: 556 SKLT----DSCLQHITGLKSLCFLSL-DQTKVTDAGMVLYLQSA---------------- 594
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L L L+ + + + S+ ++ LR L++ T+ V LA L NL+
Sbjct: 595 ----PSCLSQLSLNQTAVTEASLVVLPTCVPQLRLLSIKQTKVKD--VSALA-RLSNLQT 647
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL-- 300
L+L T + + ++ ++S P+L + ++ + Q + +DL L+ L + +
Sbjct: 648 LNLDVTGVTESSLEHLSSHPTLSSLSLAGIPVADGNQALQIISDLRLTQLTLPGRHTVTD 707
Query: 301 -------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
E + TQV+D + LST L LSL N +TD L L L +
Sbjct: 708 SGLSFLSRLSLLLELDLTDYTQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGLPSLRGLQE 767
Query: 348 LTNLSIRDAVLTNSGLG 364
L L + +T+ G+
Sbjct: 768 LQELCLDRTAVTSRGVA 784
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 32/161 (19%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVT-----DLV 67
+VTD G+ L +++ L+KL LS T +T G+ L LQ L L L VT DL+
Sbjct: 728 TQVTDQGVSQLSTMTRLKKLSLSNTQVTDAGLPSLRGLQELQELCLDRTAVTSRGVADLI 787
Query: 68 --LRSLQVL-------------------TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
L LQVL +L L+L +++++ G LK L+ +NL
Sbjct: 788 TCLPHLQVLGLASTQVGDTVVRRGVIRCNQLVKLNLSRTRITDHGLKCLKHM-HLAQVNL 846
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 147
TGV+ L I++L LS I SI N P ++S
Sbjct: 847 DGTGVS-LIGIANL----LSFTNISSIRASNTRTVPPDEVS 882
>gi|46446906|ref|YP_008271.1| hypothetical protein pc1272 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400547|emb|CAF23996.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 618
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 180/378 (47%), Gaps = 47/378 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
LK L L C +TDAG+ +L ++TL+ L L+ G+A L+ L L L+L
Sbjct: 253 LKVLHLQECRNLTDAGLAYLTPLTTLQHLNLAGCKFANAGLAHLTPLVALQHLNLSHCRN 312
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 115
+TD L L +LT L YL+L + +++ G A L L++LNL+ G+ L
Sbjct: 313 LTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLT 372
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVS 174
+++L LNLS+C N A LA ++ L T +N + + + L
Sbjct: 373 PLTALTYLNLSSC-------NNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGL------- 418
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGI 232
LT + AL+HLDL I D + + + A L +LNLS F+ AG+
Sbjct: 419 -------AHLTPLVALQHLDLGHCRNITDAGLAHLTPLVA-LTHLNLSWCYNFTDAGLAH 470
Query: 233 LAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
LA L L+ L L+G Q+ D +++++ + +L +D+S+ + A + L
Sbjct: 471 LAP-LVALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCN-----HLTDAGLPHLTPL 524
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTN 350
ALQ+L+ NL +DA L L+ L HL+L + + TD L L+ L L +
Sbjct: 525 VALQHLDLSYCRNL-----TDAGLAHLAPLVALTHLNLSSCNHFTDAGLTHLTPLLALQD 579
Query: 351 LSIRDAV-LTNSGLGSFK 367
L++ T++GL FK
Sbjct: 580 LNLNYCENFTDAGLAHFK 597
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 33/294 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ L+LS C +TDAG+ HL ++ L L LS +T G+A L+ L L+ L+L
Sbjct: 299 LVALQHLNLSHCRNLTDAGLPHLTLLTALTYLNLSHCRNITDAGLAHLTPLTALTYLNLS 358
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L LT L YL+L + +++ G A L L+ LNL+W G+
Sbjct: 359 SCNNLTDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLVTLTHLNLSWCYNFTDAGL 418
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSL--- 167
L + +L+ L+L +C N A LA ++ L T +N + + + L
Sbjct: 419 AHLTPLVALQHLDLGHCR-------NITDAGLAHLTPLVALTHLNLSWCYNFTDAGLAHL 471
Query: 168 -----LSFLDVSNS---SLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNL 218
L LD++ + + L + AL HLDLSS + + D + + + A L++L
Sbjct: 472 APLVALQHLDLNGCWQLTDAGLAHLAPLVALTHLDLSSCNHLTDAGLPHLTPLVA-LQHL 530
Query: 219 NLSNTR-FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 270
+LS R + AG+ LA L L L+LS D +++++ + +L+ ++++
Sbjct: 531 DLSYCRNLTDAGLAHLAP-LVALTHLNLSSCNHFTDAGLTHLTPLLALQDLNLN 583
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLE 241
+LT + L+HL+L+ + + + + A L++LNLS+ R + AG+ L
Sbjct: 271 YLTPLTTLQHLNLAGCKFANAGLAHLTPLVA-LQHLNLSHCRNLTDAGLPHLTLLTALTY 329
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIK-GFIQQVGAETDLVLS------ 290
+ I D +++++ + +L ++++S+ TD + + A T L LS
Sbjct: 330 LNLSHCRNITDAGLAHLTPLTALTYLNLSSCNNLTDAGLAHLTPLTALTYLNLSSCNNLT 389
Query: 291 ---LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSL 345
L L L L LNL +DA L L+ L HL L + ++TD L L+ L
Sbjct: 390 DAGLAHLTPLVTLTHLNLSWCYNFTDAGLAHLTPLVALQHLDLGHCRNITDAGLAHLTPL 449
Query: 346 SKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
LT+L++ T++GL P +L+ LDL+G W LT+ +
Sbjct: 450 VALTHLNLSWCYNFTDAGLAHLAPLVALQHLDLNGCWQLTDAGL 493
>gi|343416403|emb|CCD20380.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 1256
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 33/408 (8%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+EL L R + V DA ++ L L +L L+ D ++ L+ +++L +LDL G
Sbjct: 441 LTTLQELYL-RQMSVDDALLRDLTCHERLRELSLNSCTRITD-VSPLARMRSLEMLDLNG 498
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPN 116
L L LT L+ L L V + L RL L+L T V+ L
Sbjct: 499 CTGIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITDVSPLAR 558
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ SLE LNL++CT I+ G L + +N +AFL T ++S +
Sbjct: 559 MRSLEILNLNDCT--GIVRGLHVLCGLTTLQKLCLANVNVDDAFLRDLTCHERLRELSLN 616
Query: 177 SLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
S +R L +M++LE+LDL+ G V C L+ L L A + L
Sbjct: 617 SCTRITDVSPLARMRSLENLDLNDC-TGIVRGLHVLCGLTTLQELCLRQLSVDDAFLRDL 675
Query: 234 AGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
H L LSL S T+I D +S ++ M SL+ +D++ T +V L
Sbjct: 676 TCH-ERLRRLSLNSCTRITD--VSPLARMRSLEILDLNGC------------TGIVRGLH 720
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNL 351
L L L+ L L V DA + L+ + L LSL + + +TDVS L+ + L L
Sbjct: 721 VLCGLTTLQELCLANVNVDDAFVRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEML 778
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
++ D GL +L+ +L+ + +DA L+ H R+
Sbjct: 779 NLNDCTGIVRGLHELCGLTTLQ--ELYLPKVYVDDAFLRDLTCHERLR 824
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 177/416 (42%), Gaps = 51/416 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+EL L + V V DA ++ L L +L L+ D ++ L+ +++L +L+L G
Sbjct: 796 LTTLQELYLPK-VYVDDAFLRDLTCHERLRRLSLNSCTRITD-VSPLARMRSLEMLNLNG 853
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPN 116
L L LT L+ L L V + L RL L+L T V+ L
Sbjct: 854 CTGIVRGLHELCGLTTLQELYLRQMSVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLAR 913
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ SLE L+L++CT I+ G L + +N +AFL T ++S +
Sbjct: 914 MRSLEMLDLNDCT--GIVRGLHELCGLTTLQELCLANVNVDDAFLRDLTCHERLRELSLN 971
Query: 177 SLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
S +R L +M++LE LDL+ G V C L+ L L A + L
Sbjct: 972 SCTRITDVSPLARMRSLEKLDLNGC-TGIVRGLHVLCGLTTLQELYLRQMSVDDALLRDL 1030
Query: 234 AGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
H L LSL S T+I D +S ++ M SL+ N D+ G T +V L
Sbjct: 1031 TCH-ERLRRLSLNSCTRITD--VSPLARMRSLE-----NMDLNGC-------TGIVRGLH 1075
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS------------- 338
L L L+ L L Q V DA L L+ + L LSL + + +TDVS
Sbjct: 1076 VLCGLTTLQELYLRQMSVDDAFLRDLTCHERLRKLSLNSCTRITDVSPLARMRSLEMLDL 1135
Query: 339 ---------LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
LH L L+ L L +R + ++ L L+ L L+ +T+
Sbjct: 1136 NGCTGIVRGLHVLCGLTTLQELYLRQMCVDDAFLRDLTCHERLRRLSLNSCTRITD 1191
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 171/412 (41%), Gaps = 62/412 (15%)
Query: 1 MTC---LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 57
+TC L+ L L+ C ++TD + L + +LE L L++ G+ L L L L
Sbjct: 746 LTCHERLRRLSLNSCTRITD--VSPLARMRSLEMLNLNDCTGIVRGLHELCGLTTLQELY 803
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
L + V D LR L +L L L T V+ L +
Sbjct: 804 LPKVYVDDAFLRDLTCHERLRRLSLNSCT--------------------RITDVSPLARM 843
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
SLE LNL+ CT I+ G L + ++ +AFL T +S +S
Sbjct: 844 RSLEMLNLNGCT--GIVRGLHELCGLTTLQELYLRQMSVDDAFLRDLTCHERLRRLSLNS 901
Query: 178 LSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSAG 229
+R L +M++LE LDL +D +V C L+ L L+N A
Sbjct: 902 CTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELCLANVNVDDAF 955
Query: 230 VGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
+ L H L LSL S T+I D +S ++ M SL+ +D++ T +V
Sbjct: 956 LRDLTCH-ERLRELSLNSCTRITD--VSPLARMRSLEKLDLNGC------------TGIV 1000
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 347
L L L L+ L L Q V DA L L+ + L LSL + + +TDVS L+ +
Sbjct: 1001 RGLHVLCGLTTLQELYLRQMSVDDALLRDLTCHERLRRLSLNSCTRITDVS--PLARMRS 1058
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
L N+ + GL +L+ +L+ + +DA L+ H R+
Sbjct: 1059 LENMDLNGCTGIVRGLHVLCGLTTLQ--ELYLRQMSVDDAFLRDLTCHERLR 1108
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 144/341 (42%), Gaps = 31/341 (9%)
Query: 68 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECL 123
L L LT L+ L L V + L RL L+L T V+ L + SLE L
Sbjct: 364 LHELCGLTTLQELCLAEVSVDDAFLRDLTCHERLRELSLNSCTRITDVSPLARMRSLEML 423
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+L+ CT I+ G L + ++ +A L T ++S +S +R
Sbjct: 424 DLNGCT--GIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCHERLRELSLNSCTRITD 481
Query: 184 ---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L +M++LE LDL+ G C L+ L L A + L H L
Sbjct: 482 VSPLARMRSLEMLDLNGC-TGIVRGLHELCGLTTLQELYLRQMSVDDALLRDLTCH-ERL 539
Query: 241 EILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
LSL S T+I D +S ++ M SL+ +++++ T +V L L L
Sbjct: 540 RELSLNSCTRITD--VSPLARMRSLEILNLNDC------------TGIVRGLHVLCGLTT 585
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVL 358
L++L L V DA L L+ + L LSL + + +TDVS L+ + L NL + D
Sbjct: 586 LQKLCLANVNVDDAFLRDLTCHERLRELSLNSCTRITDVS--PLARMRSLENLDLNDCTG 643
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
GL +L+ L L L +DA L+ H R+
Sbjct: 644 IVRGLHVLCGLTTLQELCLR--QLSVDDAFLRDLTCHERLR 682
>gi|406831706|ref|ZP_11091300.1| peptidase M56 BlaR1 [Schlesneria paludicola DSM 18645]
Length = 1125
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 136/348 (39%), Gaps = 75/348 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV--LDLGGL 61
LK +DL+ KH ISTLE LS + + LL ++ NL + L+LG
Sbjct: 805 LKNVDLTPASVARLGATKH---ISTLE---LSGRSINDE---LLQAISNLPIGRLELGSG 855
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
P TD ++ L LE + + G ++N L PRL + L + T +
Sbjct: 856 PYTDDGVKQLANCVALESISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLAR 915
Query: 122 CLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L TI + + + P ++ + G TF
Sbjct: 916 IPDLRRMTISTTEQLTFDLGPFSELRSVDFTGATF------------------------- 950
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
GDD +A L ++ N+ ++AGV L L
Sbjct: 951 ----------------------GDDLTHALAEKCPRLEEASIRNSSITNAGVAALVP-LR 987
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+L +L+L QIDD + MP+L+++D++N DI G T L A +
Sbjct: 988 HLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDI-------GDRT-----LAAASGCS 1035
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSL 345
L LNL QTQ+S+ L + K + +LSL N LTD + L L
Sbjct: 1036 RLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHLKQL 1083
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 24/321 (7%)
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREA 159
L ++L V +L + L LS +I D +L+ N P+ ++ L + ++
Sbjct: 805 LKNVDLTPASVARLGATKHISTLELSGRSINDELLQAISN-LPIGRLELGSGPYTDDGVK 863
Query: 160 FLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
L +L S + ++ S++ CF L ++ L + L SS + +A + +LR
Sbjct: 864 QLANCVALES-ISIAGPSITNDCFTHLVRLPRLRGVGLRSSQFTSGVLATLARI-PDLRR 921
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKG 276
+ +S T + +G + L + +G DD + P L+ I N+ I
Sbjct: 922 MTISTTEQLTFDLGPFS----ELRSVDFTGATFGDDLTHALAEKCPRLEEASIRNSSITN 977
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ AL L HL L L++ Q+ D + L L L N + D
Sbjct: 978 ------------AGVAALVPLRHLRVLALDRAQIDDRIADSIQKMPNLEWLDLNNCDIGD 1025
Query: 337 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 396
+L S S+L+ L++ ++N GL ++++ L L LT++ + K P
Sbjct: 1026 RTLAAASGCSRLSYLNLGQTQISNEGLAVIGKLKNIRNLSLWSNQQLTDECVSHL-KQLP 1084
Query: 397 RIEVWHELSVICPSDQIGSNG 417
+ L + QI NG
Sbjct: 1085 DYRMKFVLHLQLDGTQITKNG 1105
>gi|290972583|ref|XP_002669031.1| predicted protein [Naegleria gruberi]
gi|284082572|gb|EFC36287.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 37/305 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ L ELD+ RC ++ G+K L+ + L L L L+S + L+ LD+
Sbjct: 46 MSQLTELDIERC-DISGEGIKFLIVMPQLTSLNGGYNYLQCGDAKLISEMSKLTKLDINT 104
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+ + + L +L LD+ + + + GA ++ L LN+ G +
Sbjct: 105 NEIGTEGAKYISTLNQLTELDIGNNNILSEGAKFIRNLKNLVKLNVERNNIGDEGANYIS 164
Query: 116 NISSLECLNLS---------------NCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
+ L L++ N I+ ++GNE I++ G I E++
Sbjct: 165 EMKQLTALDIGFNMFGFEGIKAISQLNHLIELSIQGNE-------ITINGVKLITEKKNL 217
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
+ + F D LS+ ++QM L LD+ ++ IG + ++A + NL++LN+
Sbjct: 218 TSLNLGNI-FYDTKTPELSQ--LVSQMHQLTTLDIENNNIGPEVANLLAEM-KNLKHLNI 273
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
+ G+ + L L L++ G QIDD +S M L ++I + F+ +
Sbjct: 274 AFNNIEKEGLSHIT-QLTQLTSLNVCGNQIDDEGAKIVSSMKQLLKLNIE----ENFLNE 328
Query: 281 VGAET 285
G ET
Sbjct: 329 GGCET 333
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 151/352 (42%), Gaps = 50/352 (14%)
Query: 36 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 95
ET T+ I +S ++ L+ L + G+ D+ R + ++++L LD+ +S G L
Sbjct: 10 ETNDTSSSIEAISEMRQLTKLGINGIQDNDM--RQIGMMSQLTELDIERCDISGEGIKFL 67
Query: 96 KMFPRLSFLNLAWT----GVTKL-PNISSLECLNLSNCTIDSILEGNENKAPLAKIS--- 147
+ P+L+ LN + G KL +S L L+++ I + EG + + L +++
Sbjct: 68 IVMPQLTSLNGGYNYLQCGDAKLISEMSKLTKLDINTNEIGT--EGAKYISTLNQLTELD 125
Query: 148 LAGTTFINEREAFLYIETSLLSF-LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
+ ++E F+ +L+ ++ +N ++++MK L LD+ +M G + ++
Sbjct: 126 IGNNNILSEGAKFIRNLKNLVKLNVERNNIGDEGANYISEMKQLTALDIGFNMFGFEGIK 185
Query: 207 MVACVG-----------------------ANLRNLNLSNTRFSSAG--VGILAGHLPNLE 241
++ + NL +LNL N + + + L + L
Sbjct: 186 AISQLNHLIELSIQGNEITINGVKLITEKKNLTSLNLGNIFYDTKTPELSQLVSQMHQLT 245
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L + I + ++ M +LK ++I+ +I+ L+ + L L
Sbjct: 246 TLDIENNNIGPEVANLLAEMKNLKHLNIAFNNIEKE------------GLSHITQLTQLT 293
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
LN+ Q+ D +S+ K+L+ L++ L + + + +LT L I
Sbjct: 294 SLNVCGNQIDDEGAKIVSSMKQLLKLNIEENFLNEGGCETIIEMPQLTQLYI 345
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 45/217 (20%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-------PVTDLVLRSL 71
G+K + ++ L +L + +T +G+ L++ +NL+ L+LG + ++ LV +
Sbjct: 183 GIKAISQLNHLIELSIQGNEITINGVKLITEKKNLTSLNLGNIFYDTKTPELSQLVSQMH 242
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLS 126
Q+ T LD+ + + A +L L LN+A+ + K + ++ L LN+
Sbjct: 243 QLTT----LDIENNNIGPEVANLLAEMKNLKHLNIAFNNIEKEGLSHITQLTQLTSLNVC 298
Query: 127 NCTIDSILEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-F 183
ID EG AKI S+ +N E FL C
Sbjct: 299 GNQIDD--EG-------AKIVSSMKQLLKLNIEENFLN----------------EGGCET 333
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
+ +M L L +SS+ IG+ VEM+ C NLR++ +
Sbjct: 334 IIEMPQLTQLYISSNRIGEKQVEMI-CGKKNLRDIRI 369
>gi|406830019|ref|ZP_11089613.1| hypothetical protein SpalD1_00225 [Schlesneria paludicola DSM
18645]
Length = 509
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 29/238 (12%)
Query: 40 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA---AVLK 96
TADG +S L NL+ L + G+ +TD L+ + L++LE L L +++N+G LK
Sbjct: 275 TADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLK 334
Query: 97 MFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
L ++ T G+ +L + L+ L+L+N I EG L ++
Sbjct: 335 NLTNLGLFDVQLTDAGLNQLRGLQRLDTLSLNNNPISD--EGLRQVGALTSLT------- 385
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
FL + ++ +++++ L L + +L++L L+S+ I DD ++ + + N
Sbjct: 386 -----FLSVPST-----EITDNGLK---GLRGLSSLKNLCLASTRISDDGLKGLIGLN-N 431
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L L+L+ TR + GVG L L +L L LS TQI D + ++ + +LK I + T
Sbjct: 432 LEQLDLAGTRVTGTGVGPLR-ELESLHSLGLSNTQISDEGLLELTTLTNLKQIGLQQT 488
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 150/372 (40%), Gaps = 58/372 (15%)
Query: 22 HLL-SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
HLL S + L L L+ T +T + L L++LS+LDLGG ++D + L L L+ L
Sbjct: 112 HLLKSFNALGTLNLNGTDITDADFSELRDLRHLSLLDLGGTRISDASIEGLSQLKNLKEL 171
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 140
+ G+++++ G LK LPN I +E++
Sbjct: 172 WIDGTEITDAGVQSLK---------------EALPN------------AIVGKDAPDESQ 204
Query: 141 APLAKISLAGTTFINEREAFL-YIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSS 197
A SL G +E A IE FLDV + + Q ++L L L S
Sbjct: 205 AIETIRSLGGGVTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEVLSAVKQFRSLRTLQLGS 264
Query: 198 SMIGDDSVEMVACVGA--------NLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLSG 247
S GD S ++A NL L + + AG+ ++ L +L +++L
Sbjct: 265 S--GDASHGLLATADGWKEISELNNLTRLTIIGIEITDAGLKEISRLSQLESLRLINLKI 322
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
T I + + +L D+ TD L L+ L L+ L+L
Sbjct: 323 TNQGMKEIGKLKNLTNLGLFDVQLTDA---------------GLNQLRGLQRLDTLSLNN 367
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
+SD L + L LS+ + +TD L L LS L NL + +++ GL
Sbjct: 368 NPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLASTRISDDGLKGLI 427
Query: 368 PPRSLKLLDLHG 379
+L+ LDL G
Sbjct: 428 GLNNLEQLDLAG 439
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
+++TDAG+K + +S LE L L +T G+ + L+NL+ L L + +TD L L+
Sbjct: 296 IEITDAGLKEISRLSQLESLRLINLKITNQGMKEIGKLKNLTNLGLFDVQLTDAGLNQLR 355
Query: 73 VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSN 127
L +L+ L L + +S+ G + L+FL++ T G+ L +SSL+ L L++
Sbjct: 356 GLQRLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNGLKGLRGLSSLKNLCLAS 415
Query: 128 CTI-DSILEGNENKAPLAKISLAGT 151
I D L+G L ++ LAGT
Sbjct: 416 TRISDDGLKGLIGLNNLEQLDLAGT 440
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 157/352 (44%), Gaps = 52/352 (14%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLPVTD 65
LDL +++DA ++ L + L++LW+ T +T G+ +L +L N V P
Sbjct: 147 LDLG-GTRISDASIEGLSQLKNLKELWIDGTEITDAGVQSLKEALPNAIVGK--DAPDES 203
Query: 66 LVLRSLQVLTKLEYLD--LWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ +++ L D + G V G L + P+ + + ++ + SL
Sbjct: 204 QAIETIRSLGGGVTRDEAVAGRPVIEVGFGGFLDVGPKTTIEEV----LSAVKQFRSLRT 259
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-----REAFLYIETSLLSFLDVSNSS 177
L L + G+ + LA + G I+E R + IE ++++
Sbjct: 260 LQLGSS-------GDASHGLLA--TADGWKEISELNNLTRLTIIGIE--------ITDAG 302
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
L L+Q+++L ++L + G + + NL NL L + + + AG+ L G L
Sbjct: 303 LKEISRLSQLESLRLINLKITNQGMKEIGKL----KNLTNLGLFDVQLTDAGLNQLRG-L 357
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-----KGFIQQVGAETDLVLS-- 290
L+ LSL+ I D + + + SL F+ + +T+I KG ++ + + +L L+
Sbjct: 358 QRLDTLSLNNNPISDEGLRQVGALTSLTFLSVPSTEITDNGLKG-LRGLSSLKNLCLAST 416
Query: 291 ------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L L LN+LE+L+L T+V+ + PL + L L L N ++D
Sbjct: 417 RISDDGLKGLIGLNNLEQLDLAGTRVTGTGVGPLRELESLHSLGLSNTQISD 468
>gi|291237888|ref|XP_002738864.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 871
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 150/342 (43%), Gaps = 65/342 (19%)
Query: 4 LKELDLSRCVKVTD-------AGMKHLLSISTLEKLWLSETGLTADGIA--LLSSLQNLS 54
LK L+LS C ++TD A LL L L L ET +T G+ L SS LS
Sbjct: 528 LKHLNLSSCRQLTDKVLDTVKADNITLLVFKYLVTLSLEETSVTDRGMQSYLQSSPSTLS 587
Query: 55 VLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL 114
L+L VTD L++L LT L+ L L G+++S+ LK +L LN+ T + +
Sbjct: 588 HLNLNKTSVTDATLQALSALTHLKSLGLEGTKISH--LDCLKALSKLQSLNICSTNLPAI 645
Query: 115 P-------------NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE--- 158
NIS+++C+N G+E L+ + L +
Sbjct: 646 ALSHLKSLTSLSSLNISNIDCMN-----------GDEALQCLSGLKLTHLKMPSRHTTTD 694
Query: 159 -AFLYIETSLLSFLDVSNS---SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
YI L LD+++ + L+ M++L L L ++ I DD++ + + +N
Sbjct: 695 VGLKYISDMPLVVLDLTDYIRITDEGVRHLSNMRSLNSLFLVNTKITDDAMTHIQGL-SN 753
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI-----DDYAISYMSMMPSLKFIDI 269
L L L +T S+ G +L G L++L L+ T++ + ++ + M+ L D
Sbjct: 754 LVELCLDHTEISNKGATVL-GFFNKLQVLGLASTRVTSKLLKSHVLNKLVMLNKLNLRDT 812
Query: 270 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D L AL+ L HL +NL++TQVS
Sbjct: 813 KIRDN---------------GLDALK-LPHLTLINLDRTQVS 838
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%), Gaps = 23/184 (12%)
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT---QIDDYAI 255
M GD++++ ++ G L +L + +R ++ VG+ ++ ++ ++ L T +I D +
Sbjct: 667 MNGDEALQCLS--GLKLTHLKMP-SRHTTTDVGL--KYISDMPLVVLDLTDYIRITDEGV 721
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
++S M SL + + NT I TD ++T +Q L++L L L+ T++S+
Sbjct: 722 RHLSNMRSLNSLFLVNTKI----------TDD--AMTHIQGLSNLVELCLDHTEISNKGA 769
Query: 316 FPLSTFKELIHLSLRNASLTDVSL--HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
L F +L L L + +T L H L+ L L L++RD + ++GL + K P L
Sbjct: 770 TVLGFFNKLQVLGLASTRVTSKLLKSHVLNKLVMLNKLNLRDTKIRDNGLDALKLPH-LT 828
Query: 374 LLDL 377
L++L
Sbjct: 829 LINL 832
>gi|168700133|ref|ZP_02732410.1| hypothetical protein GobsU_11435 [Gemmata obscuriglobus UQM 2246]
Length = 167
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R +VTD G+K L ++ L L L TG+T G+ LS L+ L+ L+L +TD ++
Sbjct: 24 RRTRVTDVGVKELAALKALTNLDLGGTGVTDAGVKELSGLKGLTRLELRSTKITDAGVKE 83
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L L L +LDL G++V++ GA L L L+L+ T VT
Sbjct: 84 LAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVT 125
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L LDL VTDAG+K L + L +L L T +T G+ L++L+NL+ LDLGG
Sbjct: 39 LKALTNLDLG-GTGVTDAGVKELSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGG 97
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
VTD + L L L LDL +QV++ G L L+ L+L TGVT
Sbjct: 98 TKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVT 149
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 202 DDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
D V+ +A + L LNL TR + GV LA L L L L GT + D + +S +
Sbjct: 5 DAGVKELAALNKGLTTLNLRRTRVTDVGVKELA-ALKALTNLDLGGTGVTDAGVKELSGL 63
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
L +++ +T I TD V L AL+NLNHL+ L T+V+DA LS
Sbjct: 64 KGLTRLELRSTKI----------TDAGVKELAALKNLNHLD---LGGTKVTDAGAKELSG 110
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L+ L L N +TD + L++L+ LT L + +T++GL
Sbjct: 111 LNFLVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTGVTDAGL 153
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
AGV LA L L+L T++ D + ++ + +L +D+ T + TD
Sbjct: 6 AGVKELAALNKGLTTLNLRRTRVTDVGVKELAALKALTNLDLGGTGV----------TDA 55
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ L L L RL L T+++DA + L+ K L HL L +TD +LS L+
Sbjct: 56 --GVKELSGLKGLTRLELRSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNF 113
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
L L + + +T++G+ + L LDLHG +T+ + + P+ +V
Sbjct: 114 LVTLDLSNTQVTDAGVKALTALTGLTTLDLHGTG-VTDAGLKELNAALPKCKV 165
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K L L+L + + D V+ +A + A L NL+L T + AGV L+G L L L L
Sbjct: 16 KGLTTLNLRRTRVTDVGVKELAALKA-LTNLDLGGTGVTDAGVKELSG-LKGLTRLELRS 73
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
T+I D + ++ + +L +D+ T + GA+ L LN L L+L
Sbjct: 74 TKITDAGVKELAALKNLNHLDLGGTKV----TDAGAK--------ELSGLNFLVTLDLSN 121
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
TQV+DA + L+ L L L +TD L +L++
Sbjct: 122 TQVTDAGVKALTALTGLTTLDLHGTGVTDAGLKELNA 158
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R K+TDAG+K L ++ L L L T +T G LS L L LDL VTD +++
Sbjct: 72 RSTKITDAGVKELAALKNLNHLDLGGTKVTDAGAKELSGLNFLVTLDLSNTQVTDAGVKA 131
Query: 71 LQVLTKLEYLDLWGSQVSNRG 91
L LT L LDL G+ V++ G
Sbjct: 132 LTALTGLTTLDLHGTGVTDAG 152
>gi|168701675|ref|ZP_02733952.1| hypothetical protein GobsU_19277 [Gemmata obscuriglobus UQM 2246]
Length = 407
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL+ +VTDAG+K L ++ L L LS T +T +G+ L++L L+ L LGG V
Sbjct: 92 LTTLDLT-FTRVTDAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSV 150
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
TD ++ L L L LDL V++ GA L L+ L +++TGVT
Sbjct: 151 TDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVT 199
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L LDLS + VTD G+K L ++ L L L T +T G+ L++L+ L+ LDLG
Sbjct: 113 LKALTTLDLSHTL-VTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKGLTALDLGS 171
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
+ VTD + L LT L L + + V++ G L L+ L LA TGVT
Sbjct: 172 MGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGVT 223
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-------GILAGHLPNL 240
+ + + LS + + D ++ +A + L L+LS T + AGV + A L L
Sbjct: 34 RPVTKVSLSFTRVTDTGLKELAAL-KGLTTLDLSYTEVTDAGVKALAALKALTALGLKGL 92
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
L L+ T++ D + ++ + +L +D+S+T + G L L L L
Sbjct: 93 TTLDLTFTRVTDAGVKALAALKALTTLDLSHT----LVTDEG--------LKELAALGAL 140
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
L L T V+DA + L+ K L L L + +TD +LS L+ LT L + +T+
Sbjct: 141 NTLGLGGTSVTDAGVKELAALKGLTALDLGSMGVTDAGAKELSGLTGLTALGMSFTGVTD 200
Query: 361 SGLGSFKPPRSLKLLDL 377
+G+ ++L L+L
Sbjct: 201 AGVKELAALKNLTHLEL 217
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIST--------LEKLWLSETGLTADGIALLSSLQNLSV 55
L LDLS +VTDAG+K L ++ L L L+ T +T G+ L++L+ L+
Sbjct: 60 LTTLDLSY-TEVTDAGVKALAALKALTALGLKGLTTLDLTFTRVTDAGVKALAALKALTT 118
Query: 56 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--- 112
LDL VTD L+ L L L L L G+ V++ G L L+ L+L GVT
Sbjct: 119 LDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKGLTALDLGSMGVTDAG 178
Query: 113 --KLPNISSLECLNLS 126
+L ++ L L +S
Sbjct: 179 AKELSGLTGLTALGMS 194
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDL + VTDAG K L ++ L L +S TG+T G+ L++L+NL+ L+L V
Sbjct: 164 LTALDLG-SMGVTDAGAKELSGLTGLTALGMSFTGVTDAGVKELAALKNLTHLELAATGV 222
Query: 64 TDLVLRSLQVLTKL 77
TD ++ L L L
Sbjct: 223 TDAGVKELAALKSL 236
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGI--------ALLSSLQNLSVLDLGGLPVT 64
+VTD G+K L ++ L L LS T +T G+ L+ L+ LDL VT
Sbjct: 44 TRVTDTGLKELAALKGLTTLDLSYTEVTDAGVKALAALKALTALGLKGLTTLDLTFTRVT 103
Query: 65 DLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISS 119
D +++L L L LDL + V++ G L L+ L L T GV +L +
Sbjct: 104 DAGVKALAALKALTTLDLSHTLVTDEGLKELAALGALNTLGLGGTSVTDAGVKELAALKG 163
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L L+L + + A ++S L G T + +SF V+++ +
Sbjct: 164 LTALDLGSMGV--------TDAGAKELSGLTGLTALG------------MSFTGVTDAGV 203
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
L +K L HL+L+++ + D V+ +A
Sbjct: 204 KE---LAALKNLTHLELAATGVTDAGVKELA 231
>gi|428225640|ref|YP_007109737.1| hypothetical protein GEI7407_2206 [Geitlerinema sp. PCC 7407]
gi|427985541|gb|AFY66685.1| leucine-rich repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 504
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 141/322 (43%), Gaps = 28/322 (8%)
Query: 40 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP 99
T ++ L +L NL LDL G V D+ RSL +LE L+L +++S+ +
Sbjct: 173 TVTDLSTLPTLPNLHQLDLSGSQVGDI--RSLAPQPRLETLNLSANRISSIALPAMPSLR 230
Query: 100 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
L N A T VT ++ LE LNL+N I S+ G + A L ++SLA R
Sbjct: 231 SLDLENNALTRVTIPASMGKLESLNLANNAIASLQFGGQIPA-LRRLSLASNQLTEVRA- 288
Query: 160 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
L LD+S + ++ L + A+ L +S + D + L+ L+
Sbjct: 289 --IASQPQLQELDLSFNQITDLGPLASLGAIRVLKISGNRPISDLRPLAGLT--TLQALD 344
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-- 277
LS + L G L NLE L LSG QI + +S + L ++ I I
Sbjct: 345 LSEASIRD--ITPLRG-LRNLETLVLSGNQIQQ--LESLSGLNRLSYLAIGGNQISDLRA 399
Query: 278 ------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
+Q + +++ + S+ L +L L+ L L Q++D PL+ L L L
Sbjct: 400 IAALYSLQTLMLDSNRITSVRPLASLGQLKVLTLGNNQITDPA--PLAALTGLTVLQLPQ 457
Query: 332 ASLTDVSLHQLSSLSKLTNLSI 353
+T+ +L+ LTNL I
Sbjct: 458 NRITN-----FDALATLTNLRI 474
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 153/350 (43%), Gaps = 56/350 (16%)
Query: 36 ETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL 95
E T D A + L++ S LDLGG +TD L L L +L L L+ S +S+ L
Sbjct: 59 EVAQTPDCQAAAARLRSQSTLDLGGRGLTD--LSPLVSLPQLTGLSLYNSSLSD--LRPL 114
Query: 96 KMFPRLSFLNLAW---TGVTKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAG 150
P L L+L++ T VT L + +L+ LNL + + L+G + L ++L G
Sbjct: 115 SSLPNLRALDLSYANLTDVTVLGTLGTLQALNLRGNPVRDLRPLQGLQR---LHTLTL-G 170
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-------- 202
+ + + + L LD+S S + L LE L+LS++ I
Sbjct: 171 WSTVTDLSTLPTLPN--LHQLDLSGSQVGDIRSLAPQPRLETLNLSANRISSIALPAMPS 228
Query: 203 -----------DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
V + A +G L +LNL+N +S G G +P L LSL+ Q+
Sbjct: 229 LRSLDLENNALTRVTIPASMG-KLESLNLANNAIASLQFG---GQIPALRRLSLASNQLT 284
Query: 252 DYAISYMSMMPSLKFIDISNTDIK--GFIQQVGAETDLVLS-------LTALQNLNHLER 302
+ + ++ P L+ +D+S I G + +GA L +S L L L L+
Sbjct: 285 E--VRAIASQPQLQELDLSFNQITDLGPLASLGAIRVLKISGNRPISDLRPLAGLTTLQA 342
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
L+L + + D T PL + L L L+ + QL SLS L LS
Sbjct: 343 LDLSEASIRDIT--PLRGLRNLETL-----VLSGNQIQQLESLSGLNRLS 385
>gi|386042670|ref|YP_005961475.1| internalin [Listeria monocytogenes 10403S]
gi|404409572|ref|YP_006695160.1| internalin I [Listeria monocytogenes SLCC5850]
gi|345535904|gb|AEO05344.1| internalin [Listeria monocytogenes 10403S]
gi|404229398|emb|CBY50802.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 1778
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 43/342 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 414 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 469
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 470 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 525
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 526 EFYAQNNSISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 583
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL ++ N F+ G LPNLE L +S
Sbjct: 584 IHDLPSLETFNAQANLITNIGTMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 643
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 644 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRNNV 695
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
D + LST LI+L+L + + D+ S+LS LTNL
Sbjct: 696 YID-DISGLSTLSRLIYLNLDSNKIEDI-----SALSNLTNL 731
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 383 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 440
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 441 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 495
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 496 -LTNFPSLNYINISNNVIRTVG---KMTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 549
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 550 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQANLITN-----IG 604
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L ++ N S + SL + L L L + D LG+ L++LDL
Sbjct: 605 TMDNLPDITYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 664
Query: 379 GGWL 382
+L
Sbjct: 665 NNYL 668
>gi|290980573|ref|XP_002673006.1| predicted protein [Naegleria gruberi]
gi|284086587|gb|EFC40262.1| predicted protein [Naegleria gruberi]
Length = 361
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 168 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
L+ LDVS + + +LTQ+ L L + ++ I DD ++M++ + L L+LSN R
Sbjct: 140 LTILDVSYNDIGYGGVKWLTQLSQLTELRIGNNSIFDDDIKMISEM-KQLTKLDLSNCRI 198
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
GV L+ L NL L L G ++ D + +S + L + I Q+G E
Sbjct: 199 MD-GVQYLS-KLENLTSLRLCGNRLTDERVESISNLKQLTELYIGEN-------QLGTE- 248
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
++ N+ L RLN++Q ++S + L L L++ + D + +S +
Sbjct: 249 ----GAKSIGNMTQLTRLNIQQNRISQGVKY-LEKLDRLTDLNISKNKIGDTGVIIISEM 303
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
++LT L+IRD ++ G + + L LD+
Sbjct: 304 NQLTKLTIRDNKISEEGAKTLGLLQKLTYLDI 335
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D +K + + L KL LS + DG+ LS L+NL+ L L G +TD + S+ L
Sbjct: 174 IFDDDIKMISEMKQLTKLDLSNCRI-MDGVQYLSKLENLTSLRLCGNRLTDERVESISNL 232
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTI 130
+L L + +Q+ GA + +L+ LN+ GV L + L LN+S I
Sbjct: 233 KQLTELYIGENQLGTEGAKSIGNMTQLTRLNIQQNRISQGVKYLEKLDRLTDLNISKNKI 292
Query: 131 DS-----ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--- 182
I E N+ L K+++ I+E A L++LD+S++S+S
Sbjct: 293 GDTGVIIISEMNQ----LTKLTIRDNK-ISEEGAKTLGLLQKLTYLDISDNSVSNVTANS 347
Query: 183 FLTQMKALEH 192
MK+L++
Sbjct: 348 MQKNMKSLKY 357
>gi|46446665|ref|YP_008030.1| hypothetical protein pc1031 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400306|emb|CAF23755.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 553
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL ++ L+ L LS+ LT G+A L+ L L L+L
Sbjct: 343 LTALQHLDLSLCYYLTDAGIAHLKPLTALQHLDLSQYRNLTDAGLAHLTPLMGLQYLNLS 402
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS--------FLNLAWTG 110
+TD L L LT L++L+L S + A ++ + P + + NL TG
Sbjct: 403 ACKNLTDAGLAHLAPLTALQHLNL-SSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTG 461
Query: 111 VTKLPNISSLECLNLSNC 128
+ L +++L+ LNLSNC
Sbjct: 462 LAHLAPLTALQHLNLSNC 479
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 144/286 (50%), Gaps = 42/286 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TD G+ HL ++ L+ L LS LT DG+A L+ L+ L L L
Sbjct: 243 LTALQRLDLSYCENLTDDGLAHLTPLTALQHLDLSYCENLTDDGLAHLAPLKALQRLALT 302
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
+TD L L LT L++LDL W ++++ G A LK L L+L+
Sbjct: 303 NCKNLTDAGLTHLTTLTALQHLDLSQYW--KLTDAGLAHLKPLTALQHLDLSLCYYLTDA 360
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFLYIETSLL 168
G+ L +++L+ L+LS N A LA ++ L G ++N L
Sbjct: 361 GIAHLKPLTALQHLDLSQ-------YRNLTDAGLAHLTPLMGLQYLN-----------LS 402
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSN-TRF 225
+ +++++ L+ LT AL+HL+LSS D+ V ++ L++L LS+
Sbjct: 403 ACKNLTDAGLAHLAPLT---ALQHLNLSSCYNLTDAGLVHLIPLTA--LQHLYLSDWENL 457
Query: 226 SSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDIS 270
+ G+ LA L L+ L+LS ++ D ++++ + +L +D+S
Sbjct: 458 TDTGLAHLAP-LTALQHLNLSNCRKLTDDGLAHLKSLVTLTHLDLS 502
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LS C +TDAG+ HL+ ++ L+ L+LS+ LT G+A L+ L L L+L
Sbjct: 418 LTALQHLNLSSCYNLTDAGLVHLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHLNLS 477
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA 107
+TD L L+ L L +LDL W ++ G L L +L L+
Sbjct: 478 NCRKLTDDGLAHLKSLVTLTHLDLSWCKNFTDEGLTHLTPLTGLQYLVLS 527
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 30/229 (13%)
Query: 184 LTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
LT + AL+HLDLS + DD + +A + A L+ L L+N + + L L+
Sbjct: 265 LTPLTALQHLDLSYCENLTDDGLAHLAPLKA-LQRLALTNCKNLTDAGLTHLTTLTALQH 323
Query: 243 LSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN--- 298
L LS ++ D ++++ + +L+ +D+S + ++ G + LTALQ+L+
Sbjct: 324 LDLSQYWKLTDAGLAHLKPLTALQHLDLS---LCYYLTDAGIAH--LKPLTALQHLDLSQ 378
Query: 299 ----------HL------ERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLH 340
HL + LNL + ++DA L L+ L HL+L + +LTD L
Sbjct: 379 YRNLTDAGLAHLTPLMGLQYLNLSACKNLTDAGLAHLAPLTALQHLNLSSCYNLTDAGLV 438
Query: 341 QLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
L L+ L +L + D LT++GL P +L+ L+L LT+D +
Sbjct: 439 HLIPLTALQHLYLSDWENLTDTGLAHLAPLTALQHLNLSNCRKLTDDGL 487
>gi|84043404|ref|XP_951492.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348240|gb|AAQ15567.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358736|gb|AAX79191.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1394
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 188/446 (42%), Gaps = 88/446 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C +TDA + +S LE+L L+ GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLSALEELNLNSCYHITKGIGTLGMLLRLRILDLSGVPV 307
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 308 EDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPK 367
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 368 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 409
Query: 161 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 196
I T L L++ + +S F + K+L L++
Sbjct: 410 SSIVTLEELNIQKCADIISGVGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 468
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
S+ G VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 469 ESITGLIDVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 526
Query: 257 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 304
+ + ++ +++S+ T++ I + A +L LS A++ L L
Sbjct: 527 SLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAI 585
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L T ++D + S K L+ L L + L DV+ LS+++ L L++ GL
Sbjct: 586 LSNTHITDRNISHFSKCKNLVTLDLSFCNKLLDVT--ALSNITTLEELNLDSCSNIRKGL 643
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 644 SVLGELPRLCVLNIKGVQL--EDSVI 667
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 172/431 (39%), Gaps = 102/431 (23%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG---- 59
L+ L++S C+++TD + L + + +E+L L+ GI ++ +L L VL +
Sbjct: 321 LERLNISYCIQLTD--INPLSNATAIEELNLNGCRRITRGIGVVWALPKLRVLHMKDVHL 378
Query: 60 ----------GLPVTDLVLRS---------LQVLTKLEYLDLWGSQVSNRGAAVLKMFPR 100
G P+ + L + L + LE L++ G L P
Sbjct: 379 SEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKCADIISGVGSLGTLPY 438
Query: 101 LSFLN--------LAWTG--------------------VTKLPNISSLECLNLSNCT-ID 131
L LN L +TG V L NI +LE L+L CT ID
Sbjct: 439 LRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLIDVEALANILTLEKLSLHGCTGID 498
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQMKAL 190
+ + N L + L+GT NE L + +++S L++S+ ++ ++ ++AL
Sbjct: 499 AGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTVVS-LNLSHCWKMTNVSHISSLEAL 557
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
L+LS+ C G N AG + L L + LS T I
Sbjct: 558 NELNLSN------------CFGIN-------------AGWEAIE-KLQQLHVAILSNTHI 591
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
D IS+ S +L +D+S F ++ L +TAL N+ LE LNL+
Sbjct: 592 TDRNISHFSKCKNLVTLDLS------FCNKL-------LDVTALSNITTLEELNLDSCSN 638
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
L L L L+++ L D + L + L +S+ D +G G P
Sbjct: 639 IRKGLSVLGELPRLCVLNIKGVQLEDSVIVSLGNGGSLVKVSLDDC----AGFGDVTPLS 694
Query: 371 ---SLKLLDLH 378
+L+ L+LH
Sbjct: 695 NLVTLEELNLH 705
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 71/393 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L R + + +HL +I TLE+L +++T + I +S L NL L+L +
Sbjct: 179 LKRLCL-RSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCLELNSTDI 236
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D + + KL L + S+ +N T T + +S+LE L
Sbjct: 237 DDSCIGEISACAKLSKLSV--SECNN------------------ITDATPISQLSALEEL 276
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
NL++C I +G I L + LS + V ++ L C
Sbjct: 277 NLNSCY--HITKG-----------------IGTLGMLLRLRILDLSGVPVEDNCLKDLC- 316
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+LE L++S + D + + LNL+ R + G+G++ LP L +L
Sbjct: 317 --DCGSLERLNISYCIQLTDINPLSNATA--IEELNLNGCRRITRGIGVVWA-LPKLRVL 371
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQVGAETDL 287
+ + + ++ S+ + +S + GF IQ+ D+
Sbjct: 372 HMKDVHLSEPSLD--SVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---DI 426
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLS 346
+ + +L L +L LN+++ +S + K L+ L++ + + L DV L+++
Sbjct: 427 ISGVGSLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNMESITGLIDV--EALANIL 484
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L LS+ ++G+G LK+LDL G
Sbjct: 485 TLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSG 517
>gi|290982306|ref|XP_002673871.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284087458|gb|EFC41127.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 529
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L++S C + G++ + +++ L KL +S + G LLS+L+NL LD+ +
Sbjct: 179 LTDLNVSYC-DIDATGIQFIRNMTCLIKLNISGNNINCKGALLLSNLKNLQELDIASACL 237
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLE 121
+ + + + L++L + +Q+ N GA + +L L+++ G L IS
Sbjct: 238 KEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLSKLEILHISNCDIGCEGLQYISK-- 295
Query: 122 CLNLSNCT-ID----------SILEGNENKAPLAKIS-----LAGTTFINEREAFLYIET 165
NL N T ID I+ + N + I+ L G ++++ E Y+
Sbjct: 296 --NLKNLTEIDIGGNHFGMDGVIVIASMNNLKVLSIAESCLGLLGVQYLSKMENLTYLNI 353
Query: 166 S-----------------LLSFLDVSNS-SLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
S L + L +NS S+ ++ + L L++ S+ I D +E+
Sbjct: 354 SDNIDDIFIGESINDLQNLTTLLYTNNSLSMDEAITISSLTQLTTLNIESTEISDVHIEI 413
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+ +L NL +S GV +++ + +LE L LSG +I D ++Y+ + L+ +
Sbjct: 414 LCSSLHHLINLYADTNFITSWGVKLISESMIDLESLYLSGNRIGDEGLTYICSLQHLRIL 473
Query: 268 DISNTDI 274
+ N +I
Sbjct: 474 GVCNCEI 480
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 73/351 (20%)
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT------------------- 112
+++ L +LD++GS + + G A L L LN+ +T
Sbjct: 100 KLMPNLIHLDIYGSDIEDSGVACLCKLKELKILNIGSNKLTSKGRGIEMISKFMKCLTNL 159
Query: 113 ------------KLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREA 159
K + L LN+S C ID+ ++ N L K++++G IN + A
Sbjct: 160 DISFNSLGNSGMKQLKLDKLTDLNVSYCDIDATGIQFIRNMTCLIKLNISGNN-INCKGA 218
Query: 160 FLYIETSLLSFLDVSNSSLS-------------RFCFLTQ-------------MKALEHL 193
L L LD++++ L +F ++ + LE L
Sbjct: 219 LLLSNLKNLQELDIASACLKEEGAKHISRMDNLKFLSISHNQILNGGAKAISSLSKLEIL 278
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
+S+ IG + ++ ++ NL +++ F GV ++A + NL++LS++ + +
Sbjct: 279 HISNCDIGCEGLQYISKNLKNLTEIDIGGNHFGMDGVIVIAS-MNNLKVLSIAESCLGLL 337
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+ Y+S M +L +++IS+ FI + S+ LQNL L N +S
Sbjct: 338 GVQYLSKMENLTYLNISDNIDDIFIGE---------SINDLQNLTTLLYTN---NSLSMD 385
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQL-SSLSKLTNLSIRDAVLTNSGL 363
+S+ +L L++ + ++DV + L SSL L NL +T+ G+
Sbjct: 386 EAITISSLTQLTTLNIESTEISDVHIEILCSSLHHLINLYADTNFITSWGV 436
>gi|156406568|ref|XP_001641117.1| predicted protein [Nematostella vectensis]
gi|156228254|gb|EDO49054.1| predicted protein [Nematostella vectensis]
Length = 803
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 32/157 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA------------------ 45
L LDLS +TD+G++++ +++L +L LS T LT +G+
Sbjct: 632 LSSLDLSDYRNITDSGVQYIAGMTSLTRLLLSNTRLTDEGMVQLSGLAKLVELNVDRTVV 691
Query: 46 ------LLSSLQNLSVLDLGGLPVTDLVLRS--LQVLTKLEYLDLWGSQVSNRGAAVLKM 97
+LS+ NL +L L VTD +LR L KL L+L + V+NRG L++
Sbjct: 692 TDKGSRVLSNFANLQILGLSSTGVTDKLLRDGVLNRCKKLCKLNLSRTSVTNRGIKHLEL 751
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCT 129
L+ LNL WT VT L +L+ L +SNCT
Sbjct: 752 N-SLTLLNLDWTRVTADCGLLLTGCPALKALRMSNCT 787
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 27/251 (10%)
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNL 220
YI+ L +L V+N L+ F Q L HL + S +I D ++E V + A L L L
Sbjct: 463 YIK--LDCYLLVTNDLLAELRFHRQ---LVHLSIKSCPIITDKALEAVVDLPA-LTTLQL 516
Query: 221 SNTRFSSAGVGILAGH---LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
NT+ S G+ +GH + L LSL+GT + + + ++ L+ + + NT I
Sbjct: 517 DNTKISDKGLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKIT-- 574
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
SL +++L HL+ LN+ T V+D L L++ L L++ S+TD
Sbjct: 575 ------------SLDVIRHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSVTDR 622
Query: 338 SLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 396
L L L L++L + D +T+SG+ SL L L LT++ ++Q +
Sbjct: 623 GLQHLKGLP-LSSLDLSDYRNITDSGVQYIAGMTSLTRL-LLSNTRLTDEGMVQLSGLAK 680
Query: 397 RIEVWHELSVI 407
+E+ + +V+
Sbjct: 681 LVELNVDRTVV 691
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 14 KVTDAGM----KHLLSISTLEKLWLSETGLTADGIALLSS-------------------- 49
K++D G+ H I TL L L+ TG+T G A L+
Sbjct: 520 KISDKGLMYFSGHANCIQTLVHLSLNGTGVTNQGTASLADWKILRILGLENTKITSLDVI 579
Query: 50 --LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS----- 102
LQ+L L++ VTD L +L L L++ + V++RG LK P S
Sbjct: 580 RHLQHLKTLNVAFTGVTDECLVALNSHPSLSSLNILQTSVTDRGLQHLKGLPLSSLDLSD 639
Query: 103 FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL--AGTTFINEREAF 160
+ N+ +GV + ++SL L LSN + EG + LAK+ T + ++ +
Sbjct: 640 YRNITDSGVQYIAGMTSLTRLLLSNTRLTD--EGMVQLSGLAKLVELNVDRTVVTDKGSR 697
Query: 161 LYIETSLLSFLDVSNSSLS----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ + L L +S++ ++ R L + K L L+LS + + + ++ + L
Sbjct: 698 VLSNFANLQILGLSSTGVTDKLLRDGVLNRCKKLCKLNLSRTSVTNRGIKHLELNSLTL- 756
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
LNL TR +A G+L P L+ L +S
Sbjct: 757 -LNLDWTRV-TADCGLLLTGCPALKALRMS 784
>gi|303286333|ref|XP_003062456.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455973|gb|EEH53275.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 169/402 (42%), Gaps = 48/402 (11%)
Query: 2 TCLKELDLSRCVKVTDAGMK-HLLSISTLEKLWLSE-TGLTADGIALLSSLQNL-SVLDL 58
T L +DL+ C +T G++ + + + + +SE G+ D +A ++S +L S
Sbjct: 56 TSLSRIDLTGCDALTSGGLRSNFPCCARMTIVNVSECAGVDDDALAAMASATHLKSFFCE 115
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
G VT +R L LT L L F R + L G+ L +
Sbjct: 116 GNDAVTGSGVRHLASLTSLRELS----------------FERCARLR---EGMCHLAGLR 156
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L LNL C S E + P S + IE SL +N+
Sbjct: 157 NLRSLNLGWCGKLSAKETSRALTPFFPASASAPRST-------PIELSLART--GANADT 207
Query: 179 SRFCFLTQMKA-LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
+R L Q+ L L++S + DD++ + + NLR+L+L R S GV L G L
Sbjct: 208 ARA--LGQLAGRLVALNVSGCAMNDDALHFLGGL-INLRSLSLERCRVSDVGVRQLCG-L 263
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
+L L+L T++ + + ++ + L+ + N D G + G E +
Sbjct: 264 RDLRELNLGYTRVTNDGVLALAPLTELRVV---NLDSLGDVGDAGMEV--------ARRW 312
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
LE L + T V D + L + L L+L ++TD L L ++ L NL++ +
Sbjct: 313 EKLESLCVSDTGVGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRL 372
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
+T+ G+ +L +DL G + E A F K P++E
Sbjct: 373 ITDDGVRHLANLGALTAIDLFGAKISDEGASRLF-KCTPKLE 413
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V D G++ L S + L L L T +T DG+ L + +L L+L +TD +R L L
Sbjct: 325 VGDGGVRKLKSCARLRDLNLGYTNVTDDGLEHLEDMTSLRNLNLDSRLITDDGVRHLANL 384
Query: 75 TKLEYLDLWGSQVSNRGAAVL-KMFPRLSFLNLAWTGVTKL 114
L +DL+G+++S+ GA+ L K P+L L L +T +
Sbjct: 385 GALTAIDLFGAKISDEGASRLFKCTPKLERLELCGGSLTNV 425
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 162/402 (40%), Gaps = 94/402 (23%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL---W------------------------ 33
+T L+EL RC ++ + GM HL + L L W
Sbjct: 131 LTSLRELSFERCARLRE-GMCHLAGLRNLRSLNLGWCGKLSAKETSRALTPFFPASASAP 189
Query: 34 --------LSETGLTADGIALLSSLQN-LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 84
L+ TG AD L L L L++ G + D L L L L L L
Sbjct: 190 RSTPIELSLARTGANADTARALGQLAGRLVALNVSGCAMNDDALHFLGGLINLRSLSLER 249
Query: 85 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 144
+VS+ G L L LNL +T VT D +L APL
Sbjct: 250 CRVSDVGVRQLCGLRDLRELNLGYTRVTN-----------------DGVLA----LAPLT 288
Query: 145 KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS 204
++ + +L S DV ++ + + + LE L +S + +GD
Sbjct: 289 ELRV----------------VNLDSLGDVGDAGME---VARRWEKLESLCVSDTGVGDGG 329
Query: 205 V-EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
V ++ +C A LR+LNL T + G+ L + +L L+L I D + +++ + +
Sbjct: 330 VRKLKSC--ARLRDLNLGYTNVTDDGLEHLE-DMTSLRNLNLDSRLITDDGVRHLANLGA 386
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF-K 322
L ID+ F ++ E L + LERL L +++ + ++ K
Sbjct: 387 LTAIDL-------FGAKISDEGASRL----FKCTPKLERLELCGGSLTNVGVKRIAEHCK 435
Query: 323 ELIHLSL-RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+ L++ RNA +TD + + ++ +LT+L++ + +T+ G+
Sbjct: 436 GMKTLNIGRNAKITDDCVDDVVTMRELTSLNLAFSKITSDGV 477
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 48/253 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ ++L V DAGM+ LE L +S+TG+ G+ L S L L+LG
Sbjct: 287 LTELRVVNLDSLGDVGDAGMEVARRWEKLESLCVSDTGVGDGGVRKLKSCARLRDLNLGY 346
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
VTD L L+ +T L L+L +++ GV L N+ +L
Sbjct: 347 TNVTDDGLEHLEDMTSLRNLNLDSRLITD-------------------DGVRHLANLGAL 387
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
++L AKIS +E + L+ T L L++ SL+
Sbjct: 388 TAIDLFG----------------AKIS-------DEGASRLFKCTPKLERLELCGGSLTN 424
Query: 181 FC---FLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
K ++ L++ ++ I DD V+ V + L +LNL+ ++ +S GV LA
Sbjct: 425 VGVKRIAEHCKGMKTLNIGRNAKITDDCVDDVVTM-RELTSLNLAFSKITSDGVRKLAA- 482
Query: 237 LPNLEILSLSGTQ 249
LP L L++ G +
Sbjct: 483 LPCLTSLAIKGCE 495
>gi|71754651|ref|XP_828240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833626|gb|EAN79128.1| hypothetical protein Tb11.53.0001 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1399
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 182/422 (43%), Gaps = 56/422 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+LS C+++TD + L + + +++L L+ GI+++ L L VL + + +
Sbjct: 325 LERLNLSHCIQLTD--INPLSNATAIQELNLNRCHRITQGISVVWELPKLRVLHMKDMHL 382
Query: 64 TDLVLRSL---QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLP 115
++ L S+ + L KL + G +L F L LN+ +GV L
Sbjct: 383 SESSLDSVGTSESLVKLSIENCAGFG----DMTLLSSFVALEELNIQKCADIISGVGCLG 438
Query: 116 NISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDV 173
+ L LN+ I SI G L ++++ TT +++ EA I T LS L
Sbjct: 439 TLPYLRVLNIKEAHISSIGFTGIGASKSLLQLTIESTTGLSDVEALANILTLEKLSLLGC 498
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS------------ 221
+ C L + L+ LDLS + DS+ + CV + +LNLS
Sbjct: 499 NGIDAGIGC-LGNLPQLKVLDLSGTNTDSDSLRGL-CVSQTIVSLNLSHCWKVTSVFHIS 556
Query: 222 -----NTRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
N S + I AG L L + LS T I D IS+ S L +D+S
Sbjct: 557 ALETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSF 616
Query: 272 TDIKGFIQQVGAET---DLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLST 320
D I + T DL L L+ L L L LN++ ++++ + L
Sbjct: 617 CDELFDITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGN 676
Query: 321 FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
K + L L N L+DV+ LSSLS L L++ SG+G+ L++LDL
Sbjct: 677 GKSFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLDL-- 732
Query: 380 GW 381
GW
Sbjct: 733 GW 734
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 137/331 (41%), Gaps = 67/331 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
L EL+LS C+++ +AG + L + L LS T +T I+ S + L LDL
Sbjct: 561 LNELNLSDCIRI-NAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDE 619
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNI 117
+ D+ SL +T LE L+L +G +VL PRL LN+ +T L N
Sbjct: 620 LFDIT--SLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNG 677
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
S L L NC L+ TF++ + L D S
Sbjct: 678 KSFVKLILDNCK-----------------GLSDVTFLSSLSTLKELN---LHHCDAVTSG 717
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--- 234
+ L Q++ L DL + I ++S+E + + L +LNLS+ + ++ I +
Sbjct: 718 IGTLGRLLQLRVL---DLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNA 774
Query: 235 -------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
G L L + LS T+I+D I ++S SL ++++
Sbjct: 775 LEKLNIDNCCHVTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNLA----- 829
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
F + TD +TAL N+ L LN++
Sbjct: 830 -FCNDI---TD----ITALSNITMLRELNID 852
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 197/462 (42%), Gaps = 66/462 (14%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LDLS C ++ D + L +I+TLE L L G+++L L L VL++ G+ +T+
Sbjct: 612 LDLSFCDELFD--ITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNS 669
Query: 67 VLRSL-----------------------QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
V+ SL L+ L+ L+L G L +L
Sbjct: 670 VIGSLGNGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRV 729
Query: 104 LNLAWTGV--TKLPNI----SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI--- 154
L+L WT + L +I S L LNLS+C + + + L K+++ +
Sbjct: 730 LDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCHVTSG 789
Query: 155 -NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 213
N + ++LS +++ ++ +++ K+L L+L+ +D ++ A
Sbjct: 790 WNVFGTLHQLRVAVLSNTRINDENIRH---ISECKSLNTLNLA---FCNDITDITALSNI 843
Query: 214 N-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQI---DDYAISYMSMMPSLKFI 267
LR LN+ GV L G LP L L GT + Y Y ++ SL +
Sbjct: 844 TMLRELNIDWCFNIEKGVEAL-GKLPKLRELDAKKCGTSVRWMQQYP--YNTLFKSLVKL 900
Query: 268 DISN---TDIKGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ N + G + +L+L L + +L L LNL+ +V D L
Sbjct: 901 NLENGRESFCVGTLSSTAIVEELLLGRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEG 960
Query: 318 LSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
+S K L L++ N + +TD+S LSSLS L L++ G +F+ L++
Sbjct: 961 ISQSKSLQSLNVSNCNYITDIS--ALSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVAT 1018
Query: 377 LHGGWLLTED-AILQFCKMHPRIEVW--HELSVICPSDQIGS 415
L W+ E +L CK +E++ ++S I P + I S
Sbjct: 1019 LSVTWVTNEGIRLLSGCKNLRNLELYCCGDVSNIEPINNIKS 1060
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 179/395 (45%), Gaps = 47/395 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L+EL+++ C ++ G + +++ L LS T +T +GI LLS +NL L+L
Sbjct: 987 LSTLEELNVNCCDRIR-KGWEAFEALTRLRVATLSVTWVTNEGIRLLSGCKNLRNLEL-- 1043
Query: 61 LPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
D+ + + + LE L + N G + M PRL L L T S
Sbjct: 1044 YCCGDVSNIEPINNIKSLEELTIQNCHNINEGLLKVGMLPRLRVLVLRKLQSTYF----S 1099
Query: 120 LECLNLSNCTIDSILEGNE---------NKAPLAKISLA-GTTFINE-----REAFLYIE 164
L L S + +EG E N A L ++ +A G +N+ + +L++
Sbjct: 1100 LSSLGESKSLVKLTIEGPEELCDIKLISNIATLKELKIAHGDRLLNDVGDLGKLPWLHVL 1159
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
T LS ++ N+ C ++++L+ LD++ S D + ++ + A L LNLS
Sbjct: 1160 T--LSHFNMGNTCFESVC---KIRSLKSLDITHSFELPD-IYHISNLTA-LEELNLSGCY 1212
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+G L LP L +L+LS T++ Y Y+S SL +++ + D+
Sbjct: 1213 HIISGWEALTA-LPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESCDM--------- 1262
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
TD + L ++ LE L++ + + L T +L L+L ++ +TD L ++
Sbjct: 1263 -TD----ASCLADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQ 1317
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+ +L++ N + + +S+K +DLH
Sbjct: 1318 LSHTIEDLNLSYCKELND-ITPVRRIKSIKKMDLH 1351
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 153/377 (40%), Gaps = 60/377 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D + HL +I TLE L +++T + I +S L NL L+ + D + +
Sbjct: 193 IDDNDVSHLFNIVTLEDLVVADT-MQLTNIKGISRLTNLKCLEFNYTSIDDSCIEEICEC 251
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
L L + S+ + + T VT + +++LE LNLSNC I
Sbjct: 252 ATLSKLSV--SECN------------------SLTDVTPISQLAALEELNLSNCY--HIT 289
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
+G I L + LS + V ++ L C LE L+
Sbjct: 290 KG-----------------IGALVRLLRLRALDLSGVSVEDNFLKDLC---DCGPLERLN 329
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
LS + D + ++ LNL+ + G+ ++ LP L +L + + + +
Sbjct: 330 LSHCIQLTDINPLSNATA--IQELNLNRCHRITQGISVVW-ELPKLRVLHMKDMHLSESS 386
Query: 255 ISYMSMMPSLKFIDISN-------TDIKGFIQ----QVGAETDLVLSLTALQNLNHLERL 303
+ + SL + I N T + F+ + D++ + L L +L L
Sbjct: 387 LDSVGTSESLVKLSIENCAGFGDMTLLSSFVALEELNIQKCADIISGVGCLGTLPYLRVL 446
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
N+++ +S + K L+ L++ + + L+DV L+++ L LS+ ++G
Sbjct: 447 NIKEAHISSIGFTGIGASKSLLQLTIESTTGLSDV--EALANILTLEKLSLLGCNGIDAG 504
Query: 363 LGSFKPPRSLKLLDLHG 379
+G LK+LDL G
Sbjct: 505 IGCLGNLPQLKVLDLSG 521
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 149/386 (38%), Gaps = 96/386 (24%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
++ L +I TLEKL L GI L +L L VLDL G LR L V +
Sbjct: 481 VEALANILTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTIVS 540
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTIDSILEG 136
L+ L+ W VT + +IS+LE LNLS+C I G
Sbjct: 541 LN----------------------LSHCWK-VTSVFHISALETLNELNLSDCI--RINAG 575
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
E L ++ +A +LS +++ +S F ++ K L LDLS
Sbjct: 576 WEALEKLQQLHVA-----------------ILSNTHITDRDISHF---SKCKELVTLDLS 615
Query: 197 SSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
D+ ++ + L +LNL N G+ +L G LP L +L++ G + + I
Sbjct: 616 ---FCDELFDITSLSNITTLEDLNLDNCSKIRKGLSVL-GELPRLRVLNVKGVHLTNSVI 671
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
+ S F+ + + KG +T L +L+ L+ LNL DA
Sbjct: 672 GSLGNGKS--FVKLILDNCKGLSD-----------VTFLSSLSTLKELNLHHC---DAVT 715
Query: 316 FPLSTFKELIHL--------SLRNASLTDV-------------------SLHQLSSLSKL 348
+ T L+ L + N SL D+ S+ ++SL+ L
Sbjct: 716 SGIGTLGRLLQLRVLDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNAL 775
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKL 374
L+I + SG F L++
Sbjct: 776 EKLNIDNCCHVTSGWNVFGTLHQLRV 801
>gi|146095030|ref|XP_001467457.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071822|emb|CAM70515.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 811
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 169/375 (45%), Gaps = 69/375 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + LS C V DA + HL + +E+L LS T +T + L++ + L ++ L V
Sbjct: 308 LRSVHLSGC-NVKDADVPHLAQLPCVEELLLSRTRIT--NVQALAAGKGLRIIQLSNAQV 364
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ LQ L L LDL + VS+ L L +LNLA T VT
Sbjct: 365 DSDGIDGLQTLPYLTRLDLSSTLVSD--VNFLGQSQSLIYLNLAKTHVT----------- 411
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+E A L+++ L +E L ++N+++ F
Sbjct: 412 -------------SEGIAGLSRL--------------LTLE-----HLMLNNNNIRDVSF 439
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + +L+ L L S+++ +E + L++L+L++TR +S H NL L
Sbjct: 440 LAESHSLKTLSLQSTLVDSAGLEGFGRL-QTLQDLSLAHTRVTSV---TELQHCHNLWRL 495
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L G+ +D I+ + +P L+ + +S TD+ A +L+L +L E+L
Sbjct: 496 DLQGSFVDQAGIAGLERLPKLRILLLSKTDV--------ASLELILKSESL------EQL 541
Query: 304 NLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
++ + V++ + F ++ L ++L + ++D+ + L +L L++ + +T+ G
Sbjct: 542 EVKFSHVNEKSAFFGVTKASALTDVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEG 599
Query: 363 LGSFKPPRSLKLLDL 377
+ RSL+ +DL
Sbjct: 600 IAGLCEARSLQEVDL 614
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 152/359 (42%), Gaps = 54/359 (15%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
H L +L+ + GL +G L +LQ+LS+ VT+L Q L LD
Sbjct: 444 HSLKTLSLQSTLVDSAGL--EGFGRLQTLQDLSLAHTRVTSVTEL-----QHCHNLWRLD 496
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEG 136
L GS V G A L+ P+L L L+ T V L I SLE L + S+ S G
Sbjct: 497 LQGSFVDQAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFG 556
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLD 194
+ L ++L + + E LL+ V++ ++ C + ++L+ +D
Sbjct: 557 VTKASALTDVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---EARSLQEVD 613
Query: 195 LSSSMIGD-----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAG 235
L+ + + D SV + +GA LR L+++ T SS + L+
Sbjct: 614 LAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVSS--IRSLSA 671
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
+LEIL+LS T +DD + + SL+ + +S T I Q L
Sbjct: 672 -CQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ--------------LG 716
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+HLE L+ + V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 717 QCSHLEELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L ++ L LD+++ D + C LR+++LS A V LA LP +E L
Sbjct: 279 LASLQKLRRLDMTNCKGDFDCAGIARC--CFLRSVHLSGCNVKDADVPHLA-QLPCVEEL 335
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 299
LS T+I + + ++ L+ I +SN + +Q + T L LS T + ++N
Sbjct: 336 LLSRTRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF 393
Query: 300 LER------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L + LNL +T V+ + LS L HL L N ++ DVS L+ L LS+
Sbjct: 394 LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSL 451
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDL 377
+ ++ ++GL F ++L+ L L
Sbjct: 452 QSTLVDSAGLEGFGRLQTLQDLSL 475
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 43/395 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ C++EL LSR ++T+ ++ L + L + LS + +DGI L +L L+ LDL
Sbjct: 329 LPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSS 385
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWTGVTKLPNI 117
V+D+ L L YL+L + V++ G A L L L N V+ L
Sbjct: 386 TLVSDVNF--LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAES 443
Query: 118 SSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGT---------------------TFIN 155
SL+ L+L + +DS LEG L +SLA T +F++
Sbjct: 444 HSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTSVTELQHCHNLWRLDLQGSFVD 503
Query: 156 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
+ L L +S + ++ + + ++LE L++ S + + S + L
Sbjct: 504 QAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASAL 563
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
++ L++ S G L +L++ +++ I+ + SL+ +D++ T +
Sbjct: 564 TDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDLAETAVT 620
Query: 276 GF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
IQ + V SL + L L RL++ +T VS ++ LS + L L
Sbjct: 621 DISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVS--SIRSLSACQSLEIL 678
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+L N ++ D + + L +S+ +T G
Sbjct: 679 NLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLG 713
>gi|302853080|ref|XP_002958057.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
gi|300256635|gb|EFJ40897.1| hypothetical protein VOLCADRAFT_99233 [Volvox carteri f.
nagariensis]
Length = 581
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 157/380 (41%), Gaps = 110/380 (28%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL--------------WLSETG-------- 38
+T LK LDL +C ++ G++HL S+ L L WL E G
Sbjct: 169 LTQLKTLDLDQCRRI-KGGLQHLTSLRHLATLRLGWCPLLGDSEVTWLRELGQLRELRLA 227
Query: 39 ---LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAA 93
+T G++ L++L L+ LDLGG +TD LQ LT L+ L L+G Q N G A
Sbjct: 228 YTQVTDVGVSHLAALTALTHLDLGGCTRLTDAAAAPLQRLTALQVLSLYGCGQFGNAGLA 287
Query: 94 VLKMFPRLSFLNLA--WTGVT--------------------------------KLPNISS 119
+L P LS +L +T VT +LP +++
Sbjct: 288 MLIAVPLLSLNSLTLSYTAVTTPGLTALSSLSRLTLLSLDSCAVGDAVCRVLRRLPRLAN 347
Query: 120 LECLNLSNCTI-DSILEGNENKAPLAKISLAGTTF--INE-----REAFLYIET-SLLSF 170
L+ LS ++ D L+ P ++ T+ +NE + F+ E S LS
Sbjct: 348 LD---LSETSVGDGGLDALTVSGPPTSLTHLKLTYTKVNELGMPGKCVFITDEGLSKLSL 404
Query: 171 L------DVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM-------------VA 209
L D+ + +L+ C +T + AL LDL S I D + +
Sbjct: 405 LVGLQQLDLDSGTLTDACLRHVTGLSALTGLDLFSCRITDAGARLLGGSGHLGGNLRSLE 464
Query: 210 CVGA--------------NLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
C G +L LNLS N R AG LA L +L+ LSL+ T I
Sbjct: 465 CCGGLLTDAGAVHLARLTSLTCLNLSQNARLGDAGAQSLAASLSDLQELSLNHTNITSAC 524
Query: 255 ISYMSMMPSLKFIDISNTDI 274
+ ++ +P L+++ +SNT +
Sbjct: 525 LRDVAALPWLRYLSVSNTRV 544
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 180/444 (40%), Gaps = 92/444 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL-TADGIALLSSLQNLSVLDLGGLP 62
L+ L LS CV +TDA + H+ ++ L++L L E L T +G+ LS L L LDL
Sbjct: 122 LQRLRLSHCVTLTDAALNHVRGLTGLQELELRECELITGEGLMQLSGLTQLKTLDLDQCR 181
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
L+ L L L L L W + + L+ +L L LA+T GV+ L
Sbjct: 182 RIKGGLQHLTSLRHLATLRLGWCPLLGDSEVTWLRELGQLRELRLAYTQVTDVGVSHLAA 241
Query: 117 ISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGT-TFINEREAFLY------IETSL 167
+++L L+L CT D+ + L +SL G F N A L + +
Sbjct: 242 LTALTHLDLGGCTRLTDAAAAPLQRLTALQVLSLYGCGQFGNAGLAMLIAVPLLSLNSLT 301
Query: 168 LSFLDVSNSSLS--------------------RFC-FLTQMKALEHLDLSSSMIGDDSVE 206
LS+ V+ L+ C L ++ L +LDLS + +GD ++
Sbjct: 302 LSYTAVTTPGLTALSSLSRLTLLSLDSCAVGDAVCRVLRRLPRLANLDLSETSVGDGGLD 361
Query: 207 MVACVG--ANLRNLNLSNTRFSSAGV---------------GILAGHLPNLEILSLSGTQ 249
+ G +L +L L+ T+ + G+ +L G L+ L L
Sbjct: 362 ALTVSGPPTSLTHLKLTYTKVNELGMPGKCVFITDEGLSKLSLLVG----LQQLDLDSGT 417
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIK------------------------GFIQQVGAET 285
+ D + +++ + +L +D+ + I G + GA
Sbjct: 418 LTDACLRHVTGLSALTGLDLFSCRITDAGARLLGGSGHLGGNLRSLECCGGLLTDAGA-- 475
Query: 286 DLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPL-STFKELIHLSLRNASLTDVSLHQLS 343
L L L LNL Q ++ DA L ++ +L LSL + ++T L ++
Sbjct: 476 ------VHLARLTSLTCLNLSQNARLGDAGAQSLAASLSDLQELSLNHTNITSACLRDVA 529
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFK 367
+L L LS+ + +T++ + +
Sbjct: 530 ALPWLRYLSVSNTRVTDAAVAKLR 553
>gi|14423508|gb|AAK62436.1|AF386991_1 Unknown protein [Arabidopsis thaliana]
gi|20148357|gb|AAM10069.1| unknown protein [Arabidopsis thaliana]
Length = 332
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L+LS +V G++HL +S LE + LS T +T G+ LS L +L L+L V
Sbjct: 131 LKSLELSD-TEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV 189
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
TD L +L LT L +LDL+G+++++ G L+ +L L + G+T
Sbjct: 190 TDAGLSALTSLTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLT 238
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L+L C ++ D G+ HL + L+ L LS+T + ++G+ LS L NL ++L
Sbjct: 104 LTKLESLNLDSC-RIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSF 162
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLP 115
VTD LR L LT L L+L V++ G + L L+ L+L +G L
Sbjct: 163 TVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGARITDSGTNHLR 222
Query: 116 NISSLECLNL 125
N+ L+ L +
Sbjct: 223 NLKKLQSLEI 232
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 44/241 (18%)
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+++NS L LT+ LE L+L S IGD+ + ++ + L++L LS+T S G+
Sbjct: 92 NITNSCLVHLKGLTK---LESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEVGSNGLR 147
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS- 290
L+G L NLE ++LS T + D + +S + SL+ +++ + TD LS
Sbjct: 148 HLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHV----------TDAGLSA 196
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL--------------------- 329
LT+L L HL+ L +++D+ L K+L L +
Sbjct: 197 LTSLTGLTHLD---LFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTL 253
Query: 330 ----RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+N++LTD +L +S L+ L +L++ ++ +++SGL KP ++L+ L L L
Sbjct: 254 LNLSQNSNLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTLESCKLSAN 313
Query: 386 D 386
D
Sbjct: 314 D 314
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C VT A + L +++ L L L+ + G S L NL +L+LG +T+ L L
Sbjct: 42 CRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHL 101
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
+ LTKLE L+L ++ + G L L L L+ T G+ L +S+LE +NLS
Sbjct: 102 KGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLS 161
>gi|290973418|ref|XP_002669445.1| predicted protein [Naegleria gruberi]
gi|284082993|gb|EFC36701.1| predicted protein [Naegleria gruberi]
Length = 280
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 26 ISTLEKLWLSETG---LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
IS +++L L G + +G ++S ++ L+ LD+GG ++D RS+ + +L +LD+
Sbjct: 22 ISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDI 81
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGN 137
+G+ + ++GA + +L+ LN+ G + + L L++ ID +EG
Sbjct: 82 YGNGIGDKGAKSISEMQQLTLLNIGGNQIGDEGAKLISQMKQLTFLDIYCNEID--VEGA 139
Query: 138 ENKAPLAK----------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
+ + + + I + G F++E + TSL ++ ++ ++QM
Sbjct: 140 KCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQL----TSLNIGENLIGDEGAK--LISQM 193
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K L LD+ + IG + + ++ + L +LN+ G +++ + L L +
Sbjct: 194 KQLTFLDIYCNEIGVEGAKSISEM-QQLTSLNIGENGIGDEGAKLIS-EMKQLTFLDIYC 251
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDI 274
+I Y+S M L ++ISN I
Sbjct: 252 NEIGVEGAKYISEMKQLTSLNISNNQI 278
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 63/321 (19%)
Query: 39 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
+ +G L+S ++ L++L++G + D + + +L +LD+ G+Q+S+ GA +
Sbjct: 14 IGVEGAKLISEMKQLTLLNIGTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKM 73
Query: 99 PRLSFLNLAWTGV--TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
+L+FL++ G+ +IS ++ L L N + GN+ AK+
Sbjct: 74 RQLTFLDIYGNGIGDKGAKSISEMQQLTLLN------IGGNQIGDEGAKL---------- 117
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--N 214
++QMK L LD+ + I VE C+
Sbjct: 118 ---------------------------ISQMKQLTFLDIYCNEI---DVEGAKCISEMQQ 147
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L +LN+ + GV L+ + L L++ I D +S M L F+DI
Sbjct: 148 LTSLNIGSNEIGVEGVKFLS-EMQQLTSLNIGENLIGDEGAKLISQMKQLTFLDI----- 201
Query: 275 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+ ++G E ++ + L LN+ + + D +S K+L L + +
Sbjct: 202 --YCNEIGVE-----GAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFLDIYCNEI 254
Query: 335 TDVSLHQLSSLSKLTNLSIRD 355
+S + +LT+L+I +
Sbjct: 255 GVEGAKYISEMKQLTSLNISN 275
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 40/252 (15%)
Query: 150 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEM 207
GT I + A + E L+FLD+ + +S +++M+ L LD+ + IGD +
Sbjct: 34 GTNEIGDEGAIMISEMKQLTFLDIGGNQISDEGARSISKMRQLTFLDIYGNGIGDKGAKS 93
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
++ + L +L++ G QI D +S M L F+
Sbjct: 94 IS--------------------------EMQQLTLLNIGGNQIGDEGAKLISQMKQLTFL 127
Query: 268 DI--SNTDIKGF-----IQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
DI + D++G +QQ +G+ V + L + L LN+ + + D
Sbjct: 128 DIYCNEIDVEGAKCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGA 187
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
+S K+L L + + +S + +LT+L+I + + + G + L L
Sbjct: 188 KLISQMKQLTFLDIYCNEIGVEGAKSISEMQQLTSLNIGENGIGDEGAKLISEMKQLTFL 247
Query: 376 DLHGGWLLTEDA 387
D++ + E A
Sbjct: 248 DIYCNEIGVEGA 259
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 50/100 (50%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C ++ G K + + L L + + +G+ LS +Q L+ L++G + D + +
Sbjct: 131 CNEIDVEGAKCISEMQQLTSLNIGSNEIGVEGVKFLSEMQQLTSLNIGENLIGDEGAKLI 190
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
+ +L +LD++ +++ GA + +L+ LN+ G+
Sbjct: 191 SQMKQLTFLDIYCNEIGVEGAKSISEMQQLTSLNIGENGI 230
>gi|386333501|ref|YP_006029671.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
gi|334195950|gb|AEG69135.1| type III effector gala6 protein [Ralstonia solanacearum Po82]
Length = 462
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 57/319 (17%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 42
L+ELDLS C +T G+ HLL++ L++L +S GL AD
Sbjct: 146 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCGLNADSARLLAGHATLTALNLRRNA 204
Query: 43 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
G+A + + L+ L++ G + +R+L T + LD+ +++ + GA L
Sbjct: 205 IGDAGVAAFARNKKLTTLNVSGNGIGPAGVRALAANTTITTLDISDNEIGDEGARALASN 264
Query: 99 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 138
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 265 AALTRLDASDCGIGPDGTQALATSTTLTSLDLSYNEIEAEGVEALGRNTTLRTLHACGNE 324
Query: 139 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
A++ A TT I A + + L+ L++SN+ + R
Sbjct: 325 LGHREAELLAASTTLTVLNLSSNAIGNAGARAFGANTTLAELNLSNNGIERVPAWADTGK 384
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L LDLS++ IGD + +++A L LN+ + R AG LAG+ L L +S +
Sbjct: 385 LTTLDLSNNRIGDAAAQVLAAS-RTLTTLNVGSNRIGDAGACALAGNT-TLATLDVSLNR 442
Query: 250 IDDYAISYMSMMPSLKFID 268
I + ++ +LK ++
Sbjct: 443 IGKAGMLALAANTTLKKLE 461
>gi|398020181|ref|XP_003863254.1| hypothetical protein, unknown function [Leishmania donovani]
gi|322501486|emb|CBZ36565.1| hypothetical protein, unknown function [Leishmania donovani]
Length = 811
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 169/375 (45%), Gaps = 69/375 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + LS C V DA + HL + +E+L LS T +T + L++ + L ++ L V
Sbjct: 308 LRSVHLSGC-NVKDADVPHLAQLPCVEELLLSRTRIT--NVQALAAGKGLRIIQLSNAQV 364
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ LQ L L LDL + VS+ L L +LNLA T VT
Sbjct: 365 DSDGIDGLQTLPYLTRLDLSSTLVSD--VNFLGQSQSLIYLNLAKTHVT----------- 411
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+E A L+++ L +E L ++N+++ F
Sbjct: 412 -------------SEGIAGLSRL--------------LTLE-----HLMLNNNNIRDVSF 439
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + +L+ L L S+++ +E + L++L+L++TR +S H NL L
Sbjct: 440 LAESHSLKTLSLQSTLVDSAGLEGFGRL-QTLQDLSLAHTRVTSV---TELQHCHNLWRL 495
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L G+ +D I+ + +P L+ + +S TD+ A +L+L +L E+L
Sbjct: 496 DLQGSFVDQAGIAGLERLPKLRILLLSKTDV--------ASLELILKSESL------EQL 541
Query: 304 NLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
++ + V++ + F ++ L ++L + ++D+ + L +L L++ + +T+ G
Sbjct: 542 EVKFSHVNEKSAFFGVTKASALTDVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEG 599
Query: 363 LGSFKPPRSLKLLDL 377
+ RSL+ +DL
Sbjct: 600 IAGLCEARSLQEVDL 614
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 152/359 (42%), Gaps = 54/359 (15%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
H L +L+ + GL +G L +LQ+LS+ VT+L Q L LD
Sbjct: 444 HSLKTLSLQSTLVDSAGL--EGFGRLQTLQDLSLAHTRVTSVTEL-----QHCHNLWRLD 496
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEG 136
L GS V G A L+ P+L L L+ T V L I SLE L + S+ S G
Sbjct: 497 LQGSFVDQAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFG 556
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLD 194
+ L ++L + + E LL+ V++ ++ C + ++L+ +D
Sbjct: 557 VTKASALTDVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---EARSLQEVD 613
Query: 195 LSSSMIGD-----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAG 235
L+ + + D SV + +GA LR L+++ T SS + L+
Sbjct: 614 LAETAVTDISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVSS--IRSLSA 671
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
+LEIL+LS T +DD + + SL+ + +S T I Q L
Sbjct: 672 -CQSLEILNLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLGQ--------------LG 716
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+HLE L+ + V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 717 QCSHLEELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L ++ L LD+++ D + C LR+++LS A V LA LP +E L
Sbjct: 279 LASLQKLRRLDMTNCKGDFDCAGIARC--CFLRSVHLSGCNVKDADVPHLA-QLPCVEEL 335
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 299
LS T+I + + ++ L+ I +SN + +Q + T L LS T + ++N
Sbjct: 336 LLSRTRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSSTLVSDVNF 393
Query: 300 LER------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L + LNL +T V+ + LS L HL L N ++ DVS L+ L LS+
Sbjct: 394 LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSL 451
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDL 377
+ ++ ++GL F ++L+ L L
Sbjct: 452 QSTLVDSAGLEGFGRLQTLQDLSL 475
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 43/395 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ C++EL LSR ++T+ ++ L + L + LS + +DGI L +L L+ LDL
Sbjct: 329 LPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSS 385
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWTGVTKLPNI 117
V+D+ L L YL+L + V++ G A L L L N V+ L
Sbjct: 386 TLVSDVNF--LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAES 443
Query: 118 SSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGT---------------------TFIN 155
SL+ L+L + +DS LEG L +SLA T +F++
Sbjct: 444 HSLKTLSLQSTLVDSAGLEGFGRLQTLQDLSLAHTRVTSVTELQHCHNLWRLDLQGSFVD 503
Query: 156 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
+ L L +S + ++ + + ++LE L++ S + + S + L
Sbjct: 504 QAGIAGLERLPKLRILLLSKTDVASLELILKSESLEQLEVKFSHVNEKSAFFGVTKASAL 563
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
++ L++ S G L +L++ +++ I+ + SL+ +D++ T +
Sbjct: 564 TDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTSEGIAGLCEARSLQEVDLAETAVT 620
Query: 276 GF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
IQ + V SL + L L RL++ +T VS ++ LS + L L
Sbjct: 621 DISPLLSCTKIQALILYRSSVRSLDGIGALRQLRRLDIAETPVS--SIRSLSACQSLEIL 678
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+L N ++ D + + L +S+ +T G
Sbjct: 679 NLSNTAVDDDGFQGIGQVQSLRVVSMSFTAITQLG 713
>gi|170040460|ref|XP_001848016.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
gi|167864100|gb|EDS27483.1| leucine-rich transmembrane protein [Culex quinquefasciatus]
Length = 1512
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 145/363 (39%), Gaps = 70/363 (19%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
LE+L+L LT+ L SL+ L LDL ++ L + + L +L+ L L +Q+
Sbjct: 626 LERLYLRNNTLTSIEYGALDSLRRLRYLDLSVNRLSTLNEQLFRSLAELDELHLGDNQIE 685
Query: 89 NRGAAVLKMFPRLSFLNLAWTGVTKL------PNISSLECLNLSNCTIDSILEGNENKAP 142
N G V +L L+++ + L PN+S + +NL +C + I E N
Sbjct: 686 NLGPNVFSSLRKLRVLDISDNPLGTLQKDVFQPNLS-VSMINLKSCGLSRI-EAN----- 738
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
+ G +NE L+L + +
Sbjct: 739 ----TFRGLQNLNE------------------------------------LNLEDNRLRA 758
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
D V + ++LR L LS+ F+ +L LP+L+ L L I + + S
Sbjct: 759 DDVRQIDV--SSLRTLRLSSNNFTVIRENML-DRLPSLQNLVLDRCSIRELPATLFSKNN 815
Query: 263 SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 322
+L +D+SN ++ L NLN + L L Q++D LS
Sbjct: 816 NLVKLDLSNNYLR------------TLKRNTFNNLNVFKELRLHNNQINDFPHVALSNVS 863
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDLHGGW 381
L LSL LT V ++L L L +L RD +++ SG + P L ++DL G
Sbjct: 864 TLELLSLSKNQLTSVDFYKLHGLPNLRHLDFRDNTISSLSGFNTVTLPH-LDMIDLSGNL 922
Query: 382 LLT 384
LL
Sbjct: 923 LLA 925
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 165/408 (40%), Gaps = 45/408 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDLS +++ + S++ L++L L + + G + SSL+ L VLD+ P+
Sbjct: 650 LRYLDLS-VNRLSTLNEQLFRSLAELDELHLGDNQIENLGPNVFSSLRKLRVLDISDNPL 708
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV----TKLPNISS 119
L Q + ++L +S A + L+ LNL + + ++SS
Sbjct: 709 GTLQKDVFQPNLSVSMINLKSCGLSRIEANTFRGLQNLNELNLEDNRLRADDVRQIDVSS 768
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--- 176
L L LS+ I E ++ P + + I E A L+ + + L LD+SN+
Sbjct: 769 LRTLRLSSNNFTVIRENMLDRLPSLQNLVLDRCSIRELPATLFSKNNNLVKLDLSNNYLR 828
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGD----------------------DSVEMVACVG-A 213
+L R F + + L L ++ I D SV+ G
Sbjct: 829 TLKRNTF-NNLNVFKELRLHNNQINDFPHVALSNVSTLELLSLSKNQLTSVDFYKLHGLP 887
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NLR+L+ + SS G LP+L+++ LSG + ++ SL+ ID+S
Sbjct: 888 NLRHLDFRDNTISSLS-GFNTVTLPHLDMIDLSGNLLLALPQNFFKHSISLQRIDLSCNR 946
Query: 274 IKGFIQQVGAETDLV----LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
+E+ L L+LT N L+R++ T D + L L +
Sbjct: 947 FNQIPNAALSESSLARLAWLNLTG----NPLQRIHHTMTAADDQH----RKYPHLKELHI 998
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+LT ++ L L + + G+F +L++LDL
Sbjct: 999 SQTNLTILTSKDFEIYPALQRLYLIQNRINRVSPGAFVALSNLQILDL 1046
>gi|229097621|ref|ZP_04228579.1| Internalin [Bacillus cereus Rock3-29]
gi|228685760|gb|EEL39680.1| Internalin [Bacillus cereus Rock3-29]
Length = 726
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|329906145|ref|ZP_08274368.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547327|gb|EGF32161.1| hypothetical protein IMCC9480_2835 [Oxalobacteraceae bacterium
IMCC9480]
Length = 518
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
M L+ LDL+ C + +A + HL + L++L LS LT G+A L L LDL
Sbjct: 188 MPALQVLDLTACTTIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQHLDLS 247
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW------TGVT 112
G VTD LR L L L++LD+ ++ A L F + LN + G+
Sbjct: 248 GCQQVTDAGLRGLSALRSLQHLDVHSCRLVT--GATLGDFAVMKSLNAGFCRRFSDAGLA 305
Query: 113 KLPNISSLECLNLSNC---TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
+ + L+ L +++C T D++ L ++ +GT + L+ + SL
Sbjct: 306 AVAGMHDLQQLEITHCVALTRDALATCLPQLTQLQTLNASGTPLSDAPLQALFAQGSLQQ 365
Query: 170 FLDVSNSSLSR--FCFLTQMKALEHLDLSS--SMIGD-----------DSVEMVACVGAN 214
+ +L+ L AL LDL S ++GD +++++ C G
Sbjct: 366 LVLQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTALETLDLSRCSGVT 425
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISN 271
+L F S L L+ L L G +I+D ++++ +P+LK +D+++
Sbjct: 426 GDDLR----HFQS---------LSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTD 470
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGG 60
T L+ LDLSRC VT ++H S+S L+ L L G D G+A L +L L LDL
Sbjct: 411 TALETLDLSRCSGVTGDDLRHFQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTD 470
Query: 61 LP-VTDLVLRSLQVLTKLEYLDL 82
+TD LR + LE L +
Sbjct: 471 CGYLTDGALRRIAHFPALEKLHI 493
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 198/441 (44%), Gaps = 59/441 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIAL--LSSLQNLSVLDLGGL 61
L+ +DL C++VTDAG+ L ++ L L L+E A G AL + L++L++ G
Sbjct: 69 LEHVDLRSCIQVTDAGLATLAALPALHTLELAEQR-DASGAALAQMPQLRHLTLQRCQG- 126
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNL------AWTGVTKL 114
+T L ++ L++L++ +++ A L+ +L L+L + +G+
Sbjct: 127 -ITPAALEAVANQANLQHLEISLRRNMTDDELASLRPLLQLRHLSLNGSSGFSGSGLEDW 185
Query: 115 PNISSLECLNLSNCTIDSILEGN---ENKAP-LAKISLAGTTFINEREAFLYIETSLLSF 170
P + +L+ L+L+ CT +I E N K P L +++L+ + + S L
Sbjct: 186 PQMPALQVLDLTACT--TIAEANLVHLAKLPDLQQLNLSSCQQLTDAGVAHLPLASTLQH 243
Query: 171 LDVSNSSL---SRFCFLTQMKALEHLDLSS------SMIGDDSVEMVACVGANLRNLNLS 221
LD+S + L+ +++L+HLD+ S + +GD +V +++LN
Sbjct: 244 LDLSGCQQVTDAGLRGLSALRSLQHLDVHSCRLVTGATLGDFAV---------MKSLNAG 294
Query: 222 -NTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI---- 274
RFS AG+ +AG L LEI D A + + + L+ ++ S T +
Sbjct: 295 FCRRFSDAGLAAVAGMHDLQQLEITHCVALTRDALA-TCLPQLTQLQTLNASGTPLSDAP 353
Query: 275 ------KGFIQQVGAETDLVLSLTALQNLN---HLERLNLEQTQ--VSDA-TLFPLSTFK 322
+G +QQ+ + L+ L L L L+L + V DA T
Sbjct: 354 LQALFAQGSLQQLVLQHCRALTEPGLAQLATSPALVSLDLRSCRGVVGDALPALGRQTAL 413
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSLKLLDLHGGW 381
E + LS R + +T L SLSKL L + + ++GL + +LK LDL
Sbjct: 414 ETLDLS-RCSGVTGDDLRHFQSLSKLQTLRLVGCGRINDAGLAHLQALPALKTLDLTDCG 472
Query: 382 LLTEDAILQFCKMHPRIEVWH 402
LT+ A+ + P +E H
Sbjct: 473 YLTDGALRRIAHF-PALEKLH 492
>gi|290996867|ref|XP_002681003.1| predicted protein [Naegleria gruberi]
gi|284094626|gb|EFC48259.1| predicted protein [Naegleria gruberi]
Length = 518
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 38/381 (9%)
Query: 25 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD----LVLRSLQVLTKLEYL 80
S+S L KL + +TGL I++L +L+NL+ L+L L + D ++ + L+ +TKL +
Sbjct: 106 SMSQLTKLDVGKTGLHTFPISILPNLENLTELNLTFLEIFDQGAKIISQRLKFITKLS-V 164
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCT-----I 130
D G + G + +L+FLN++ + + + L+ L++ N T +
Sbjct: 165 DYCG--IGIEGVQAIGNMKQLTFLNISENEMRNEEIELIGTLDQLKYLSIRNITRENNSV 222
Query: 131 DSILEGN--ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQ 186
D L+ N +N L +++ +E E L+ L+V+N + +++
Sbjct: 223 DDYLDFNSLKNLKLLTYLNIGENRISDEIGLQFLREMKQLTHLNVANMEIGSIGAKIISE 282
Query: 187 MKALEHLDLSSSMIGDDSV----EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
M L L++ + IG + EM N++N NL +F L G + L+
Sbjct: 283 MTHLVKLNIGRNDIGRTGIDYIGEMKQLTSLNVQNCNLMECKF-------LCG-MKQLQY 334
Query: 243 LSLSGTQIDDYAISYMSM-MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L++S I + + + + LKF++IS + + L + L L LN L
Sbjct: 335 LNISENTIRNEGVDLICKELSQLKFLNISEILSRPY----QFRNVLPIKLENLPRLNQLT 390
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
L+L +V++ +L L K L L++R S+T +S +S+LT L+I + +
Sbjct: 391 ELDLSSDRVNEESLIFLLELKCLTSLNVRRNSITCNCAKIISGMSQLTKLNISETQVDEL 450
Query: 362 GLGSFKPPRSLKLLDLHGGWL 382
+ + L++L + +L
Sbjct: 451 VMEYICGMKELRVLYMQKNYL 471
>gi|423447642|ref|ZP_17424521.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
gi|401130053|gb|EJQ37722.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
Length = 710
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|430744264|ref|YP_007203393.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
gi|430015984|gb|AGA27698.1| hypothetical protein Sinac_3437 [Singulisphaera acidiphila DSM
18658]
Length = 329
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDAG++HL ++ L+KL+L +T +T G+A L L+NL VL L G V D + SL+ L
Sbjct: 102 VTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLKGLKNLEVLSLVGTQVGDAGVDSLKDL 161
Query: 75 TKLEYLDLWGSQVSNRG 91
L+ L L GS+V++ G
Sbjct: 162 PNLQTLFLLGSKVTDEG 178
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L+ VS+S L L ++ L L L + + D +E + + L+ L L +T+ +
Sbjct: 73 LAITKVSDSDL---VVLEKLGKLTRLSLVGTPVTDAGLEHLKGL-TELKKLYLVDTKVTD 128
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 265
AG+ L G L NLE+LSL GTQ+ D + + +P+L+
Sbjct: 129 AGLAHLKG-LKNLEVLSLVGTQVGDAGVDSLKDLPNLQ 165
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
++L T+VSD+ L L +L LSL +TD L L L++L L + D +T++G
Sbjct: 71 VSLAITKVSDSDLVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAG 130
Query: 363 LGSFKPPRSLKLLDLHG 379
L K ++L++L L G
Sbjct: 131 LAHLKGLKNLEVLSLVG 147
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+ +L L L+ L L G PVTD L L+ LT+L+ L L ++V++ G A LK L
Sbjct: 83 LVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLKGLKNLEV 142
Query: 104 LNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNENKA---PLAKISLA 149
L+L T GV L ++ +L+ L L + EG + P +I LA
Sbjct: 143 LSLVGTQVGDAGVDSLKDLPNLQTLFLLGSKVTD--EGTKKAVEALPKTRIDLA 194
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L+ L L RL+L T V+DA L L EL L L + +TD L L L L
Sbjct: 83 LVVLEKLGKLTRLSLVGTPVTDAGLEHLKGLTELKKLYLVDTKVTDAGLAHLKGLKNLEV 142
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
LS+ + ++G+ S K +L+ L L G +T++ + + P+ +
Sbjct: 143 LSLVGTQVGDAGVDSLKDLPNLQTLFLLGSK-VTDEGTKKAVEALPKTRI 191
>gi|46447626|ref|YP_008991.1| hypothetical protein pc1992 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401267|emb|CAF24716.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 537
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 33/278 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGLP 62
LK L+L C +TDAG+ HL ++ L +L LS LT G+A L+ L L LDL
Sbjct: 266 LKMLNLKSCKNLTDAGLAHLTPLTALRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWCK 325
Query: 63 -VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L L L YLDL ++++ G A L L LNL + G+ L
Sbjct: 326 NLTDAGLAHLTPLGALHYLDLSICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHL 385
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++ +L+ L+LS C N A LA LA T + LS
Sbjct: 386 RSLVTLQHLDLSYCQ-------NLTDAGLAH--LARLTALQH-----------LSLNRCK 425
Query: 175 NSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGI 232
N + + L + L+HLDLS + +D + + + A L+ LNL++ + + AG+
Sbjct: 426 NLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTA-LQYLNLNHCQKLTDAGLAH 484
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
L+ L L+ L L T I D ++++ + +L+++ +S
Sbjct: 485 LSP-LGALQHLDLWCTNITDAGLAHLKPLGALQYLGLS 521
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 16/249 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ +L + L+ L LS LT G+A L+ L L LDL
Sbjct: 288 LTALRRLDLSFCRNLTDAGLANLTPLIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLS 347
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
+TD L L L L++L+L + ++S+ G A L+ L L+L++ G+
Sbjct: 348 ICGKLTDAGLAHLTPLVDLQHLNLRYCQKLSDAGLAHLRSLVTLQHLDLSYCQNLTDAGL 407
Query: 112 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
L +++L+ L+L+ C ++ L L + L+ + L+ + L
Sbjct: 408 AHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGLGLFKSLTALQ 467
Query: 170 FLDVSNSSL---SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRF 225
+L++++ + L+ + AL+HLDL + I D + + +GA L+ L LS T
Sbjct: 468 YLNLNHCQKLTDAGLAHLSPLGALQHLDLWCTNITDAGLAHLKPLGA-LQYLGLSRCTNL 526
Query: 226 SSAGVGILA 234
+ AG+ L+
Sbjct: 527 TDAGLAHLS 535
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 215 LRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 272
LR L+LS R + AG+ L L L+ L LS + + D +++++ + +L ++D+S
Sbjct: 291 LRRLDLSFCRNLTDAGLANLTP-LIALQHLDLSWCKNLTDAGLAHLTPLGALHYLDLS-- 347
Query: 273 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRN 331
I G + G + LT L +L HL NL Q +SDA L L + L HL L
Sbjct: 348 -ICGKLTDAG-----LAHLTPLVDLQHL---NLRYCQKLSDAGLAHLRSLVTLQHLDLSY 398
Query: 332 A-SLTDVSLHQLSSLSKLTNLSI-RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+LTD L L+ L+ L +LS+ R LT +GL +P +L+ LDL LT D +
Sbjct: 399 CQNLTDAGLAHLARLTALQHLSLNRCKNLTEAGLVHLRPLVTLQHLDLSYCQKLTNDGL 457
>gi|423534546|ref|ZP_17510964.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
gi|402462963|gb|EJV94666.1| hypothetical protein IGI_02378, partial [Bacillus cereus HuB2-9]
Length = 618
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|290996272|ref|XP_002680706.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
gi|284094328|gb|EFC47962.1| hypothetical protein NAEGRDRAFT_63852 [Naegleria gruberi]
Length = 418
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTI 130
LTKLE + L G VS+ ++FP L+ L + +T L NI+ LE L++ C
Sbjct: 148 LTKLEKIIL-GGNVSDENVQQFQLFPNLTSLKIPQGHITNLKNIAKLEKLTELDIGECC- 205
Query: 131 DSILEGNENKAPLA------KISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFC 182
D +L+ + +PLA +SL+ F E + L+S LDVS+S ++
Sbjct: 206 DIVLD--DGLSPLALMKNLTSLSLSKIVFAPEEYKPITQLPRLVS-LDVSSSDNTVESIK 262
Query: 183 FLT-QMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
LT +K L ++S++ +IGD++ ++ L LN+SNT GV + L L
Sbjct: 263 ILTSSLKQLTIFNISNNFLIGDEAARLIGESLKQLTFLNISNTNLQPQGVKYIC-ELTEL 321
Query: 241 EILSLSGTQIDDYAISYM---SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L + QI D + ++ L +D+ NT ++ E L +L L
Sbjct: 322 RHLEMGENQIFDQEVVFICKSKFSSKLTNLDLKNT-------RISKE-----CLKSLSTL 369
Query: 298 NHLERLNLEQTQVSDATL-FPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
++L+ LNL T++ + + FP FK+L L+L+ +L L +L++ ++
Sbjct: 370 DNLQYLNLMFTEIDKSNITFP---FKKLRFLTLKENNLDGDELEELTNFNQ 417
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 54/274 (19%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETG-----LTADGIALLSSLQNLSVLDLGGLPVTDLV 67
+K+ + +L +I+ LEKL + G + DG++ L+ ++NL+ L L
Sbjct: 177 LKIPQGHITNLKNIAKLEKLTELDIGECCDIVLDDGLSPLALMKNLTSLSLS-------- 228
Query: 68 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 127
++ F + +T+LP + SL+ ++ S+
Sbjct: 229 --------------------------------KIVFAPEEYKPITQLPRLVSLD-VSSSD 255
Query: 128 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNSSLSR--FCFL 184
T++SI + L +++ I + A L E+ L+FL++SN++L ++
Sbjct: 256 NTVESIKILTSSLKQLTIFNISNNFLIGDEAARLIGESLKQLTFLNISNTNLQPQGVKYI 315
Query: 185 TQMKALEHLDLSSSMIGDDSVEMV--ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
++ L HL++ + I D V + + + L NL+L NTR S + L+ L NL+
Sbjct: 316 CELTELRHLEMGENQIFDQEVVFICKSKFSSKLTNLDLKNTRISKECLKSLST-LDNLQY 374
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L+L T+ID I++ L+F+ + ++ G
Sbjct: 375 LNLMFTEIDKSNITF--PFKKLRFLTLKENNLDG 406
>gi|18378037|emb|CAD21749.1| hypothetical leucine-rich repeat protein 1, LRRP1 [Trypanosoma
brucei]
Length = 1394
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 183/436 (41%), Gaps = 86/436 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C +TDA + + LE+L L+ GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLEALEELNLNSCYHITKGIGTLGMLLRLRILDLSGVPV 307
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T E L+L G + RG V+ P+
Sbjct: 308 EDNCLKGLCDCGSLERLNISYCIQLKDINPLSNATATEELNLNGCRRITRGIGVVWALPK 367
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 368 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 409
Query: 161 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 196
I T L L++ + +S F + K+L L++
Sbjct: 410 SSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 468
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
S+ G +VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 469 ESITGLSNVEALANI-LTLEKLSLHGCTDIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 526
Query: 257 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 304
+ + ++ +++S+ T++ I + A +L LS A++ L L
Sbjct: 527 SLCLSQTMVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEAIEKLQQLHVAI 585
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L T ++D + S K L+ L L + L DV+ LS+++ L +L++ + GL
Sbjct: 586 LPNTHITDRDISHFSNCKNLVTLDLSFCNKLLDVT--TLSNITTLEDLNLDNCSNIRKGL 643
Query: 364 GSFKPPRSLKLLDLHG 379
L +L++ G
Sbjct: 644 SVLGELPRLCVLNIKG 659
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 154/376 (40%), Gaps = 70/376 (18%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
+HL +I TLEKL +++T + I +S L NL LDL + D +R + KL L
Sbjct: 195 RHLFNIGTLEKLAITDT-MQLTNIRGISRLTNLMCLDLNSTNIDDSCVRRICACVKLSKL 253
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 140
+ S+ +N T T + + +LE LNL++C I +G
Sbjct: 254 SV--SECNN------------------ITDATPISQLEALEELNLNSCY--HITKG---- 287
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
I L + LS + V ++ L C +LE L++S +
Sbjct: 288 -------------IGTLGMLLRLRILDLSGVPVEDNCLKGLC---DCGSLERLNISYCIQ 331
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
D + LNL+ R + G+G++ LP L +L + + + ++ +
Sbjct: 332 LKDINPLSNATAT--EELNLNGCRRITRGIGVVWA-LPKLRVLHMKDVHLSEPSLDSVGT 388
Query: 261 MPSLKFIDISNTDIKGF----------------IQQVGAETDLVLSLTALQNLNHLERLN 304
L + +S + GF IQ+ D++ + L L +L LN
Sbjct: 389 GGPL--VKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---DIISGVGCLGTLPYLRVLN 443
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGL 363
+++ +S + K L+ L++ S+T +S + L+++ L LS+ ++G+
Sbjct: 444 IKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEALANILTLEKLSLHGCTDIDAGI 501
Query: 364 GSFKPPRSLKLLDLHG 379
G LK+LDL G
Sbjct: 502 GCLGNLPQLKMLDLSG 517
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 168/404 (41%), Gaps = 45/404 (11%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA---DGIALLSSLQNLSVLDL 58
T +EL+L+ C ++T G+ + ++ L L + + L+ D + L +S+ +
Sbjct: 342 TATEELNLNGCRRIT-RGIGVVWALPKLRVLHMKDVHLSEPSLDSVGTGGPLVKVSLDNC 400
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TK 113
G D+ L L + LE L++ G L P L LN+ + T
Sbjct: 401 AGFG--DMTL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTG 456
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
+ SL LN+ + T S +E N L K+SL G T I+ L L LD+
Sbjct: 457 IGASKSLLQLNMESITGLSNVEALANILTLEKLSLHGCTDIDAGIGCLG-NLPQLKMLDL 515
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDD--------SVEMVACVGANLRNLNLSNTRF 225
S ++ T ++L L LS +M+ + +V ++ + A L LNLSN
Sbjct: 516 SGTN-------TDNESLRSLCLSQTMVSLNLSHCWKMTNVSHISSLEA-LNELNLSNCFG 567
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT----DIKGFIQQV 281
+AG + L L + L T I D IS+ S +L +D+S D+
Sbjct: 568 INAGWEAIE-KLQQLHVAILPNTHITDRDISHFSNCKNLVTLDLSFCNKLLDVTTLSNIT 626
Query: 282 GAE-------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS- 333
E +++ L+ L L L LN++ + D+ + L + LSL N
Sbjct: 627 TLEDLNLDNCSNIRKGLSVLGELPRLCVLNIKGVHLKDSVIGSLGNGNSFVKLSLENCKG 686
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
DV LS+L L L++ SG+G+ L++LDL
Sbjct: 687 FGDVK--PLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 728
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 190/477 (39%), Gaps = 94/477 (19%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
+L L C D +K L ++ TLE+L L G+ L L L VLDLG V +
Sbjct: 678 KLSLENCKGFGD--VKPLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDLGRTQVDN 735
Query: 66 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 125
LE + S + + + K T ++ + ++++LE LN+
Sbjct: 736 ---------NSLENICTSSSPLVSLNLSHCKKI----------TSISAIASLTALEELNI 776
Query: 126 SNCTIDSILEGNENKAPLAKISLA--GTTFINEREAFLYIETSLLSFL------DVSN-S 176
NC ++ G L ++ +A T IN+ E L+ L D+++ +
Sbjct: 777 DNCC--NVTSGWNVFGTLHQLRVATLSNTRINDENVRHVSECKSLNTLNLAFCKDITDVT 834
Query: 177 SLSRFCFLTQM---------KALEH---------LDLSSSMIGDDSVEMVACVG--ANLR 216
+LS+ L ++ K +E L + IGD + + +G +L
Sbjct: 835 ALSKITMLEELNLDCCPNIRKGIETLGTLPKARILSMKECQIGDSDAQQCSILGNSKSLV 894
Query: 217 NLNLSNTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
LNL +R + + A ++ LE L L Q + I S +P L+ +++ TDI
Sbjct: 895 KLNLERSR---GRISVKALSNIATLEELVLDHAQ-EVCCIPSFSCLPHLRVLNVKYTDIN 950
Query: 276 GFIQQVGAET-----------DLVLSLTALQNLNHLERLN-------------------- 304
G + + +E+ V ++ L +L+ LE+LN
Sbjct: 951 GDVTKNISESKSLRLLNLSHCKWVTDISVLSSLSTLEKLNVKCCNGIRKGWESLGKLPLL 1010
Query: 305 ----LEQTQVSDATLFPLSTFKELIHLS-LRNASLTDVS-LHQLSSLSKLTNLSIRDAVL 358
L T ++ + LS+ K L+ L R L+DV+ ++++ SL +L S D +
Sbjct: 1011 RVAILSDTNITAKDIACLSSCKTLVKLKFFRCEKLSDVTVVYKIQSLEELMVRSCSDGLK 1070
Query: 359 TNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 415
+ LG+ R L L +L G + E + IE+ EL+ P I S
Sbjct: 1071 GLNALGTLPRLRFLHLRNLKGSDISVESIGTSKSLVRLNIEMREELTNATPLSNITS 1127
>gi|401426392|ref|XP_003877680.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493926|emb|CBZ29217.1| hypothetical protein, unknown function [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 811
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 167/375 (44%), Gaps = 69/375 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + LS C V DA + HL + +E+L LS T +T + L++ + L ++ L V
Sbjct: 308 LRSVHLSGC-NVKDADVPHLAQLPCVEELLLSRTRIT--NVQALATGKGLRIIQLSNAQV 364
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ LQ L L LDL + VS+ L L +LNLA T VT
Sbjct: 365 DSDGIDGLQTLPYLTRLDLSSTLVSD--VNCLGQSQSLIYLNLAKTHVT----------- 411
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+E A L+++ L +E L ++N+++ F
Sbjct: 412 -------------SEGIADLSRL--------------LTLE-----HLMLNNNNIRDVSF 439
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + +L+ L L S+++ ++E + L++L+L++TR ++ H NL L
Sbjct: 440 LAESHSLKTLSLQSTLVDSAALEGFGRL-QTLQDLSLAHTRVTNV---TELQHCHNLWRL 495
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN-HLER 302
L G+ +D I+ + +P L+ + +S TD+ A +L+L +L+ L R
Sbjct: 496 DLQGSFVDQAGIAGLERLPKLRVLLLSKTDV--------ASLELILQSASLEQLEVKFSR 547
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+N + F ++ L +++L + ++D+ + L +L L++ + +T+ G
Sbjct: 548 VN------EKSAFFGVTKASALTYVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEG 599
Query: 363 LGSFKPPRSLKLLDL 377
+ +SL+ +DL
Sbjct: 600 IAGLCDAKSLQEVDL 614
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 51/342 (14%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRL 101
+G L +LQ+LS L VT++ LQ L LDL GS V G A L+ P+L
Sbjct: 462 EGFGRLQTLQDLS---LAHTRVTNVT--ELQHCHNLWRLDLQGSFVDQAGIAGLERLPKL 516
Query: 102 SFLNLAWTGVTKLPNI---SSLECLNLSNCTID--SILEGNENKAPLAKISLAGTTFINE 156
L L+ T V L I +SLE L + ++ S G + L ++L +
Sbjct: 517 RVLLLSKTDVASLELILQSASLEQLEVKFSRVNEKSAFFGVTKASALTYVTLTHCDVSDI 576
Query: 157 REAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMIGD------------ 202
+ E LL+ V++ ++ C K+L+ +DL+ + + D
Sbjct: 577 NNLGMCKELRLLNVWSSKVTSEGIAGLC---DAKSLQEVDLAETAVTDIGPLLSCTKIQA 633
Query: 203 -----DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
SV + +GA LR L+++ T SS + L+ +LEIL+LS T +DD
Sbjct: 634 LILYKSSVRSLDGIGALQRLRRLDIAETPVSS--IRSLSA-CQSLEILNLSNTAVDDDGF 690
Query: 256 SYMSMMPSLKFIDISNTDIK--------GFIQQVGAETDLVLS--LTALQNLNHLERLNL 305
+ SLK + +S T I ++++ A++ V S L L+ L +LNL
Sbjct: 691 QGIGQAQSLKVVSMSFTAITQLGQLGQCSHLEELYAQSCPVTSEGLVGLEKACCLAKLNL 750
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
T++ + L+ ++L+ L N T+V +++ + +
Sbjct: 751 SYTKIQGG-IQRLTNCRKLLKL---NVKFTEVPYDEVAYVKR 788
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 43/395 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ C++EL LSR ++T+ ++ L + L + LS + +DGI L +L L+ LDL
Sbjct: 329 LPCVEELLLSR-TRITN--VQALATGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSS 385
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWTGVTKLPNI 117
V+D + L L YL+L + V++ G A L L L N V+ L
Sbjct: 386 TLVSD--VNCLGQSQSLIYLNLAKTHVTSEGIADLSRLLTLEHLMLNNNNIRDVSFLAES 443
Query: 118 SSLECLNLSNCTIDS-ILEGNENKAPLAKISLAGTTFINERE------------AFLYIE 164
SL+ L+L + +DS LEG L +SLA T N E +++
Sbjct: 444 HSLKTLSLQSTLVDSAALEGFGRLQTLQDLSLAHTRVTNVTELQHCHNLWRLDLQGSFVD 503
Query: 165 TSLLSFLD---------VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
+ ++ L+ +S + ++ + Q +LE L++ S + + S + L
Sbjct: 504 QAGIAGLERLPKLRVLLLSKTDVASLELILQSASLEQLEVKFSRVNEKSAFFGVTKASAL 563
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
+ L++ S G L +L++ +++ I+ + SL+ +D++ T +
Sbjct: 564 TYVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTSEGIAGLCDAKSLQEVDLAETAVT 620
Query: 276 GF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
IQ + V SL + L L RL++ +T VS ++ LS + L L
Sbjct: 621 DIGPLLSCTKIQALILYKSSVRSLDGIGALQRLRRLDIAETPVS--SIRSLSACQSLEIL 678
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+L N ++ D + L +S+ +T G
Sbjct: 679 NLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQLG 713
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 123/300 (41%), Gaps = 70/300 (23%)
Query: 98 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID--SIL-----EGNEN---KAPLAKIS 147
PRL LA S +E L L N T+ S+L EG N P ++
Sbjct: 226 LPRLQMFALA----------SRIEELVLDNVTVHPHSVLAIGNAEGQGNGQAPPPSNRVP 275
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSN-------SSLSRFCFLTQMKALEHLDLSSSMI 200
L+ F+ + L LD++N + ++R CFL + LS +
Sbjct: 276 LSDLVFLQK-----------LRRLDMTNCKGDFDWAGVARCCFL------RSVHLSGCNV 318
Query: 201 GDDSVEMVA---CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
D V +A CV L LS TR ++ V LA L I+ LS Q+D I
Sbjct: 319 KDADVPHLAQLPCV----EELLLSRTRITN--VQALATG-KGLRIIQLSNAQVDSDGIDG 371
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
+ +P L +D+S+T LV + L L LNL +T V+ +
Sbjct: 372 LQTLPYLTRLDLSST--------------LVSDVNCLGQSQSLIYLNLAKTHVTSEGIAD 417
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
LS L HL L N ++ DVS L+ L LS++ ++ ++ L F ++L+ L L
Sbjct: 418 LSRLLTLEHLMLNNNNIRDVSF--LAESHSLKTLSLQSTLVDSAALEGFGRLQTLQDLSL 475
>gi|290999929|ref|XP_002682532.1| predicted protein [Naegleria gruberi]
gi|284096159|gb|EFC49788.1| predicted protein [Naegleria gruberi]
Length = 339
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 145/330 (43%), Gaps = 39/330 (11%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
+ HL + L+ L + + + +G+ +S L+ L+ LD+ + + + L L +L
Sbjct: 44 VHHLSGLKQLKSLHIYGSQIRGEGVRYISELKQLTNLDIRSHNIFHIGAKYLSELKQLTT 103
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGN 137
L+++G+ + +G+ + +L+ L +A GV +S L+ L+N I GN
Sbjct: 104 LNIYGNHIGAKGSKYISELNQLTTLFIAENSIGVEGAKYLSELK--QLTNLGISVNWLGN 161
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDL 195
E A ++KI L+ LD+S++ + L ++K L L++
Sbjct: 162 EGLAYVSKI-------------------KQLTILDISHNDIGAEGGKHLGELKQLTLLNI 202
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
S + I D+ +E + + L L ++ + G L+ L L L++S +I D
Sbjct: 203 SHNKIQDEGLENIGKL-KQLTTLIINQNDIGAEGAQYLS-ELKQLTFLNISDNRIGDEGS 260
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
Y+ + L + I++ DI + GA+ L++L L LN+ + D
Sbjct: 261 KYIGELKQLVDLYINDNDIG----EEGAK--------YLRDLKQLIYLNVGGNEFGDEGA 308
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+S K+L L + N S+ D LS +
Sbjct: 309 KYISELKQLTKLDINNNSIGDEGTKHLSEM 338
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 137/330 (41%), Gaps = 49/330 (14%)
Query: 62 PVTDLVLR--------SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAW 108
+T LV+R L L +L+ L ++GSQ+ G + +L+ L N+
Sbjct: 30 SLTKLVIRIEEEEEVHHLSGLKQLKSLHIYGSQIRGEGVRYISELKQLTNLDIRSHNIFH 89
Query: 109 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 168
G L + L LN+ GN I G+ +I+E T+L
Sbjct: 90 IGAKYLSELKQLTTLNIY---------GNH-------IGAKGSKYISELNQL----TTL- 128
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
F+ ++ + +L+++K L +L +S + +G++ + V+ + L L++S+ +
Sbjct: 129 -FIAENSIGVEGAKYLSELKQLTNLGISVNWLGNEGLAYVSKI-KQLTILDISHNDIGAE 186
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
G G G L L +L++S +I D + + + L + I+ DI GAE
Sbjct: 187 G-GKHLGELKQLTLLNISHNKIQDEGLENIGKLKQLTTLIINQNDI-------GAEGAQY 238
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
LS L L LN+ ++ D + K+L+ L + + + + L L +L
Sbjct: 239 LS-----ELKQLTFLNISDNRIGDEGSKYIGELKQLVDLYINDNDIGEEGAKYLRDLKQL 293
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
L++ + G + L LD++
Sbjct: 294 IYLNVGGNEFGDEGAKYISELKQLTKLDIN 323
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G K+L + L L +S L +G+A +S ++ L++LD+ + + L L +L
Sbjct: 139 GAKYLSELKQLTNLGISVNWLGNEGLAYVSKIKQLTILDISHNDIGAEGGKHLGELKQLT 198
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI 133
L++ +++ + G + +L+ L ++ G L + L LN+S+ I
Sbjct: 199 LLNISHNKIQDEGLENIGKLKQLTTLIINQNDIGAEGAQYLSELKQLTFLNISDNRI--- 255
Query: 134 LEGNENKAPLAKISLAGTTFINE----REAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQ 186
G+E + ++ +IN+ E Y+ + L +L+V + ++++
Sbjct: 256 --GDEGSKYIGELKQLVDLYINDNDIGEEGAKYLRDLKQLIYLNVGGNEFGDEGAKYISE 313
Query: 187 MKALEHLDLSSSMIGDDSVEMVA 209
+K L LD++++ IGD+ + ++
Sbjct: 314 LKQLTKLDINNNSIGDEGTKHLS 336
>gi|423379089|ref|ZP_17356373.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
gi|423623795|ref|ZP_17599573.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401257718|gb|EJR63915.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401633535|gb|EJS51312.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
Length = 717
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423465200|ref|ZP_17441968.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
gi|402418961|gb|EJV51249.1| hypothetical protein IEK_02387, partial [Bacillus cereus BAG6O-1]
Length = 628
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|229116621|ref|ZP_04246007.1| Internalin [Bacillus cereus Rock1-3]
gi|228666793|gb|EEL22249.1| Internalin [Bacillus cereus Rock1-3]
Length = 705
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 387
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 363
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|343418611|emb|CCD19670.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 840
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 172/402 (42%), Gaps = 51/402 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+EL L+ C ++TD + L + +LE L L++ G+ +L L L L L + V
Sbjct: 52 LRELSLNSCTRITD--VSPLARMRSLEILNLNDCTGIVRGLHVLCGLTTLQELCLANVNV 109
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D +R L +L L L N + T V+ L + SLE L
Sbjct: 110 DDAFVRDLTCHERLRRLSL------NSCTRI--------------TDVSPLARMRSLEML 149
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
NL++CT I+ G L + + +AFL T +S +S +R
Sbjct: 150 NLNDCT--GIVRGLHELCGLTTLQELYLPKVYVDDAFLRDLTCHERLRRLSLNSCTRITD 207
Query: 184 ---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L +M++LE LDL+ IG C L+ L L +A + L H L
Sbjct: 208 VSPLARMRSLEMLDLNGC-IGIVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCH-ERL 265
Query: 241 EILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
LSL S T+I D +S ++ M SL+ +D++ D G ++ L L L
Sbjct: 266 RRLSLNSCTRITD--VSPLARMRSLEMLDLN--DCTGIVR----------GLHELCGLTT 311
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVL 358
L+ L L Q V DA L L+ + L LSL + + +TDVS L+ + L NL + D
Sbjct: 312 LQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLENLDLNDCTG 369
Query: 359 TNSGLGSFKPPRSLKLLDLHGGW-LLTEDAILQFCKMHPRIE 399
GL +L+ L L W L +DA ++ H R+
Sbjct: 370 IVRGLHVLCGLTTLQELCL---WQLCVDDAFVRDLTCHERLR 408
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 170/407 (41%), Gaps = 60/407 (14%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTAD--GIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
V DA ++ L L +L L+ D +A + SL+NL + D G ++R L
Sbjct: 322 VDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLENLDLNDCTG------IVRGLH 375
Query: 73 VL---TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNL 125
VL T L+ L LW V + L RL L+L T V+ L + SLE LNL
Sbjct: 376 VLCGLTTLQELCLWQLCVDDAFVRDLTCHERLRRLSLNSCTRITNVSPLARMRSLEILNL 435
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF-- 183
+ CT I+ G L + + +AFL T +S +S +R
Sbjct: 436 NGCT--GIVRGLHVLCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVS 493
Query: 184 -LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L +M++LE LDL+ G V C L+ L L+ + A + L H L
Sbjct: 494 PLARMRSLEMLDLNGC-TGIVRGLHVLCGLTTLQELCLAEVPVNDALLRDLTCH-ERLRE 551
Query: 243 LSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
LSL S T+I D +S ++ M SL+ +D++ D G ++ L L L L+
Sbjct: 552 LSLNSCTRITD--VSPLARMRSLEMLDLN--DCTGIVR----------GLHELCGLTTLQ 597
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS---------------------- 338
L L Q V +A L L+ + L LSL + + +TDVS
Sbjct: 598 ELCLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCIGIVRG 657
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
LH+L L+ L L + + N+ L L+ L L+ +T+
Sbjct: 658 LHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITD 704
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 191/466 (40%), Gaps = 78/466 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+EL L + V V DA ++ L L +L L+ D ++ L+ +++L +LDL G
Sbjct: 167 LTTLQELYLPK-VYVDDAFLRDLTCHERLRRLSLNSCTRITD-VSPLARMRSLEMLDLNG 224
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPN 116
L L LT L+ L LW V N L RL L+L T V+ L
Sbjct: 225 CIGIVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVSPLAR 284
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ SLE L+L++CT I+ G L + + +AFL T +S +
Sbjct: 285 MRSLEMLDLNDCT--GIVRGLHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLN 342
Query: 177 SLSRFCF---LTQMKALEHLDLSSS------------------------MIGDDSVEMVA 209
S +R L +M++LE+LDL+ + D V +
Sbjct: 343 SCTRITDVSPLARMRSLENLDLNDCTGIVRGLHVLCGLTTLQELCLWQLCVDDAFVRDLT 402
Query: 210 CVGANLRNLNL-SNTRFSSA----------------------GVGILAGHLPNLEILSLS 246
C LR L+L S TR ++ G+ +L G L L+ L L
Sbjct: 403 C-HERLRRLSLNSCTRITNVSPLARMRSLEILNLNGCTGIVRGLHVLCG-LTTLQELYLW 460
Query: 247 GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAE-------TDLVLSLTALQ 295
+DD + ++ L+ + +++ TD+ + E T +V L L
Sbjct: 461 QLCVDDAFLRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLDLNGCTGIVRGLHVLC 520
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIR 354
L L+ L L + V+DA L L+ + L LSL + + +TDVS L+ + L L +
Sbjct: 521 GLTTLQELCLAEVPVNDALLRDLTCHERLRELSLNSCTRITDVS--PLARMRSLEMLDLN 578
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGW-LLTEDAILQFCKMHPRIE 399
D GL +L+ L L W L ++A L+ H R+
Sbjct: 579 DCTGIVRGLHELCGLTTLQELCL---WQLCVDNAFLRDLTCHERLR 621
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 159/370 (42%), Gaps = 50/370 (13%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVL---TKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+ SL+ L + D G ++R L VL T L+ L LW V + L RL
Sbjct: 1 MRSLEMLDLNDCTG------IVRGLHVLCGLTTLQELCLWQLCVDDALLRDLTCHERLRE 54
Query: 104 LNL----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
L+L T V+ L + SLE LNL++CT I+ G L + +N +A
Sbjct: 55 LSLNSCTRITDVSPLARMRSLEILNLNDCT--GIVRGLHVLCGLTTLQELCLANVNVDDA 112
Query: 160 FLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CV 211
F+ T +S +S +R L +M++LE L+L +D +V C
Sbjct: 113 FVRDLTCHERLRRLSLNSCTRITDVSPLARMRSLEMLNL------NDCTGIVRGLHELCG 166
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDIS 270
L+ L L A + L H L LSL S T+I D +S ++ M SL+ +D++
Sbjct: 167 LTTLQELYLPKVYVDDAFLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLN 223
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
+G +V L L L L+ L L Q V +A L L+ + L LSL
Sbjct: 224 GC--------IG----IVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLN 271
Query: 331 NAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+ + +TDVS L+ + L L + D GL +L+ +L+ L +DA L
Sbjct: 272 SCTRITDVS--PLARMRSLEMLDLNDCTGIVRGLHELCGLTTLQ--ELYLWQLCVDDAFL 327
Query: 390 QFCKMHPRIE 399
+ H R+
Sbjct: 328 RDLTCHERLR 337
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 185/415 (44%), Gaps = 49/415 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWL-SETGLTADGIALLSSLQNLSVLDLG 59
+T L+EL L + + V DA ++ L L +L L S T +T ++ L+ +++L +L+L
Sbjct: 380 LTTLQELCLWQ-LCVDDAFVRDLTCHERLRRLSLNSCTRIT--NVSPLARMRSLEILNLN 436
Query: 60 GLPVTDLVLRSLQVL---TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVT 112
G ++R L VL T L+ L LW V + L RL L+L T V+
Sbjct: 437 GCTG---IVRGLHVLCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITDVS 493
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
L + SLE L+L+ CT I+ G L + + +A L T +
Sbjct: 494 PLARMRSLEMLDLNGCT--GIVRGLHVLCGLTTLQELCLAEVPVNDALLRDLTCHERLRE 551
Query: 173 VSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTR 224
+S +S +R L +M++LE LDL +D +V C L+ L L
Sbjct: 552 LSLNSCTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELCLWQLC 605
Query: 225 FSSAGVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTD--IKGFIQQV 281
+A + L H L LSL S T+I D +S ++ M SL+ +D++ ++G +
Sbjct: 606 VDNAFLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNGCIGIVRGLHELC 662
Query: 282 GAET-------DLVLSLTALQNLN---HLERLNLEQ-TQVSDATLFPLSTFKELIHLSLR 330
G T L + L++L L RL+L T+++D + PL+ + L L L
Sbjct: 663 GLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVS--PLARMRSLEMLDLN 720
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+ + LH+L L+ L L + + ++ L L+ L L+ +T+
Sbjct: 721 DCTGIVRGLHELCGLTTLQELYLWQLCVDDAFLRDLTCHERLRRLSLNSCTRITD 775
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 144/342 (42%), Gaps = 38/342 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+EL L+ V V DA ++ L L +L L+ D ++ L+ +++L +LDL
Sbjct: 522 LTTLQELCLAE-VPVNDALLRDLTCHERLRELSLNSCTRITD-VSPLARMRSLEMLDLND 579
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPN 116
L L LT L+ L LW V N L RL L+L T V+ L
Sbjct: 580 CTGIVRGLHELCGLTTLQELCLWQLCVDNAFLRDLTCHERLRRLSLNSCTRITDVSPLAR 639
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ SLE L+L+ C I+ G L + + AFL T +S +
Sbjct: 640 MRSLEMLDLNGCI--GIVRGLHELCGLTTLQELYLWQLCVDNAFLRDLTCHERLRRLSLN 697
Query: 177 SLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSA 228
S +R L +M++LE LDL +D +V C L+ L L A
Sbjct: 698 SCTRITDVSPLARMRSLEMLDL------NDCTGIVRGLHELCGLTTLQELYLWQLCVDDA 751
Query: 229 GVGILAGHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
+ L H L LSL S T+I D +S ++ M SL+ +D++ +G +
Sbjct: 752 FLRDLTCH-ERLRRLSLNSCTRITD--VSPLARMRSLEMLDLNGC--------IG----I 796
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
V L L L L+ L L V DA + L+ + L + L
Sbjct: 797 VRGLHVLCGLTTLQELCLANVNVDDAFVRGLACHERLRKMRL 838
>gi|423546410|ref|ZP_17522768.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
gi|401180979|gb|EJQ88133.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB5-5]
Length = 710
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423540177|ref|ZP_17516568.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
gi|401173712|gb|EJQ80924.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
Length = 710
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|423442133|ref|ZP_17419039.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
gi|402416089|gb|EJV48408.1| hypothetical protein IEA_02463, partial [Bacillus cereus BAG4X2-1]
Length = 595
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLSS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDVSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS+ K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLSSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 369 PLYALPLKDLVLT 381
>gi|290974572|ref|XP_002670019.1| leucine-rich repeat protein [Naegleria gruberi]
gi|284083573|gb|EFC37275.1| leucine-rich repeat protein [Naegleria gruberi]
Length = 334
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S+ + F+++MK L L +S + IGD+ V++++ + L +LN+SN R GV +++
Sbjct: 124 SIEKAKFISEMKQLTSLIISDNGIGDEGVKLISEL-KQLTSLNMSNNRIGDEGVKLIS-E 181
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L L +S I + +S M L ++I+ ++G E + +
Sbjct: 182 LKQLTSLDISLNDIGAEGVKSISEMKQLTSLNIN-------YNRIGDE-----GVKLISE 229
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L LN+ + D + +S K+L L++ N + D + +S L +LT+L+I +
Sbjct: 230 LKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISELKQLTSLNISNN 289
Query: 357 VLTNSGLGSFKPPRSLKLLDLH 378
+ G S + L L ++
Sbjct: 290 RIGAEGAKSISEMKQLTSLSIN 311
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 53/249 (21%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
K + + L L +S+ G+ +G+ L+S L+ L+ L++ + D ++ + L +L L
Sbjct: 129 KFISEMKQLTSLIISDNGIGDEGVKLISELKQLTSLNMSNNRIGDEGVKLISELKQLTSL 188
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 135
D+ + + G + +L+ LN+ + GV + + L LN+SN I
Sbjct: 189 DISLNDIGAEGVKSISEMKQLTSLNINYNRIGDEGVKLISELKQLTSLNISNNGI----- 243
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 195
G+E G I+E MK L L++
Sbjct: 244 GDE-----------GVKLISE------------------------------MKQLTSLNI 262
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
S++ IGD+ V+ ++ + L +LN+SN R + G ++ + L LS++ QI D +
Sbjct: 263 SNNGIGDEGVKSISEL-KQLTSLNISNNRIGAEGAKSIS-EMKQLTSLSINYNQIGDEGV 320
Query: 256 SYMSMMPSL 264
+S M L
Sbjct: 321 KSISDMKQL 329
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G+K + + L L +S G+ +G+ L+S ++ L+ L++ + D ++S+
Sbjct: 218 RIGDEGVKLISELKQLTSLNISNNGIGDEGVKLISEMKQLTSLNISNNGIGDEGVKSISE 277
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLN 124
L +L L++ +++ GA + +L+ L++ + GV + ++ L LN
Sbjct: 278 LKQLTSLNISNNRIGAEGAKSISEMKQLTSLSINYNQIGDEGVKSISDMKQLTSLN 333
>gi|83592173|ref|YP_425925.1| hypothetical protein Rru_A0837 [Rhodospirillum rubrum ATCC 11170]
gi|386348881|ref|YP_006047129.1| hypothetical protein F11_04310 [Rhodospirillum rubrum F11]
gi|83575087|gb|ABC21638.1| Leucine-rich repeat [Rhodospirillum rubrum ATCC 11170]
gi|346717317|gb|AEO47332.1| leucine-rich repeat-containing protein [Rhodospirillum rubrum F11]
Length = 1085
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 158/336 (47%), Gaps = 54/336 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
L+ L+NL L L VTDL L + L+ L L +QV++ L L +NL
Sbjct: 90 LTGLENLQGLFLSYTAVTDLT--PLTGIKSLQSLILSETQVTD--LTPLAGLKNLQSINL 145
Query: 107 AWTGVTKLPNISSLECLNLSNCTID-------SILEGNENKAPLAKISLAGTTFINEREA 159
+ T +T L ++ LE NL N T+ + L G EN L + L GT I+
Sbjct: 146 SATQITDLAPLAGLE--NLQNLTLSYTTVTDLAPLAGLEN---LQHLILLGTRVID---- 196
Query: 160 FLYIETSLLSF--LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----A 213
L L S LD+S + ++ L +K+L+ LDL + + D + VG
Sbjct: 197 -LTPLAGLKSLQSLDLSGTRVTNIAPLVGLKSLQSLDLRRTRVTD----IAPLVGLKSLK 251
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
+L++LNLS T + + LAG L NL+ L+LS T + D A ++ + +L+ ID+ T+
Sbjct: 252 SLQSLNLSRTPVTD--LAPLAG-LENLQNLTLSYTTVTDLAP--LAGLENLQNIDLGGTE 306
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
V+ L L L +L+ ++L T+V D L PL+ + L +L+L +
Sbjct: 307 --------------VIDLAPLAGLENLQNIDLGGTEVID--LAPLAGLENLQNLTLSYTT 350
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+TD L L+ L L ++ +T+ G F P
Sbjct: 351 VTD--LAPLAGLENLQSIDCSGCRITSVPDGLFDSP 384
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L+ L+LSR VTD + L + L+ L LS T +T +A L+ L+NL +DLGG
Sbjct: 250 LKSLQSLNLSR-TPVTD--LAPLAGLENLQNLTLSYTTVT--DLAPLAGLENLQNIDLGG 304
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
V DL L L L+ +DL G++V + A L L L L++T VT L ++ L
Sbjct: 305 TEVIDLA--PLAGLENLQNIDLGGTEVID--LAPLAGLENLQNLTLSYTTVTDLAPLAGL 360
Query: 121 ECL---NLSNCTIDSILEG 136
E L + S C I S+ +G
Sbjct: 361 ENLQSIDCSGCRITSVPDG 379
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 145/330 (43%), Gaps = 84/330 (25%)
Query: 13 VKVTD----AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+VTD AG+K+L SI+ LS T +T +A L+ L+NL L L VTDL
Sbjct: 126 TQVTDLTPLAGLKNLQSIN------LSATQIT--DLAPLAGLENLQNLTLSYTTVTDLA- 176
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
L L L++L L G++V + +T L + SL+ L+LS
Sbjct: 177 -PLAGLENLQHLILLGTRVID---------------------LTPLAGLKSLQSLDLSGT 214
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ +I APL + L ++ R + + ++ L +K
Sbjct: 215 RVTNI-------APL--VGLKSLQSLDLRRTRV--------------TDIAPLVGLKSLK 251
Query: 189 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+L+ L+LS + + D + G NL+NL LS T + + LAG L NL+ + L G
Sbjct: 252 SLQSLNLSRTPVTD----LAPLAGLENLQNLTLSYTTVTD--LAPLAG-LENLQNIDLGG 304
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
T++ D A ++ + +L+ ID+ T+ V+ L L L +L+ L L
Sbjct: 305 TEVIDLAP--LAGLENLQNIDLGGTE--------------VIDLAPLAGLENLQNLTLSY 348
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDV 337
T V+D L PL+ + L + +T V
Sbjct: 349 TTVTD--LAPLAGLENLQSIDCSGCRITSV 376
>gi|290987592|ref|XP_002676506.1| predicted protein [Naegleria gruberi]
gi|284090109|gb|EFC43762.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 114 LPNISSLE--CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
LPNI +LE C T DS + G + KI G I ++ A +IE L+ L
Sbjct: 6 LPNIVTLEWTCSRYQKFTFDSGIFGTMKQLTKLKI---GENNIGDQNAKCFIEMKQLTSL 62
Query: 172 DVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
DV ++++S+ F+ +M L +L+++++ +G+ + ++ + L LN+ G
Sbjct: 63 DVYHNNISKEGAKFIGEMTQLTYLNVNTNNVGELGAKYISKLNQ-LITLNIGLNSIGEQG 121
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLV 288
++ + L L++ I + +++S M L IS NT G +
Sbjct: 122 AEYIS-EMKQLTDLNIYSCNIGNRGANHISRMKQL----ISLNTGRNGLDDE-------- 168
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ + LN L LN+ + +S+ L +S K++IHL + N + D +S + +L
Sbjct: 169 -GVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQL 227
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
T L I + + G + L LD+
Sbjct: 228 TRLDISNNSIGEEGTKYISEMKKLTYLDI 256
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 59/258 (22%)
Query: 45 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
+ +++ L+ L +G + D + + +L LD++ + +S GA + +L++L
Sbjct: 27 GIFGTMKQLTKLKIGENNIGDQNAKCFIEMKQLTSLDVYHNNISKEGAKFIGEMTQLTYL 86
Query: 105 NLAWTGVTKL--PNISSLECLNLSNCTIDSILE----------------------GNENK 140
N+ V +L IS L L N ++SI E GN
Sbjct: 87 NVNTNNVGELGAKYISKLNQLITLNIGLNSIGEQGAEYISEMKQLTDLNIYSCNIGNRGA 146
Query: 141 APLAK----ISL-AGTTFINEREAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEH 192
+++ ISL G +++ E YI E + L+FL++++S++S +++ MK + H
Sbjct: 147 NHISRMKQLISLNTGRNGLDD-EGVKYISELNQLNFLNIADSNISEEGLNYISGMKQIIH 205
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
LD+S++ I D+ E+++ + L L +S I +
Sbjct: 206 LDISNNFIDDEGAEIIS--------------------------RMKQLTRLDISNNSIGE 239
Query: 253 YAISYMSMMPSLKFIDIS 270
Y+S M L ++DI
Sbjct: 240 EGTKYISEMKKLTYLDIG 257
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 176 SSLSRFCF----LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
S +F F MK L L + + IGD + + + L +L++ + S G
Sbjct: 17 SRYQKFTFDSGIFGTMKQLTKLKIGENNIGDQNAKCFIEM-KQLTSLDVYHNNISKEGAK 75
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLS 290
+ G + L L+++ + + Y+S + L ++I N+ I + GAE
Sbjct: 76 FI-GEMTQLTYLNVNTNNVGELGAKYISKLNQLITLNIGLNS-----IGEQGAE------ 123
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
+ + L LN+ + + +S K+LI L+ L D + +S L++L
Sbjct: 124 --YISEMKQLTDLNIYSCNIGNRGANHISRMKQLISLNTGRNGLDDEGVKYISELNQLNF 181
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA-ILQFCKMHPRIEV 400
L+I D+ ++ GL + + LD+ ++ E A I+ K R+++
Sbjct: 182 LNIADSNISEEGLNYISGMKQIIHLDISNNFIDDEGAEIISRMKQLTRLDI 232
>gi|46447141|ref|YP_008506.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400782|emb|CAF24231.1| hypothetical protein pc1507 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 623
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 68/312 (21%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET----------------------- 37
+ L+ L+LS C ++TDAG+ HL S+ L+ L LSE
Sbjct: 314 LVALQHLELSDCPRLTDAGLAHLTSLVALQYLNLSECSNFTDAGLAHLTPLLTLTHLNLS 373
Query: 38 ---GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 92
T G+A L+ L L L+LG +TD L L L L++L+L W S +++ G
Sbjct: 374 WCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAGLAHLSPLVALQHLNLGWCSNLTDAGL 433
Query: 93 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
A L L L+L W G+ L ++ +L+ L+LS C + G + +PL +
Sbjct: 434 AHLSPLVALQHLDLGWCSNLTDAGLAHLTSLVALQHLDLSWCYYLTD-AGLAHLSPLVAL 492
Query: 147 S-LAGTTFINEREAFLYIETSL--LSFLDVS---NSSLSRFCFLTQMKALEHLDLS---- 196
L + ++ ++A L T L L +L+++ N + + LT + AL+HLDLS
Sbjct: 493 QHLDLSNCLSLKDAGLAHLTLLVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCPN 552
Query: 197 ---------SSMIGDDSVEMVACVG------------ANLRNLNLSNT-RFSSAGVGILA 234
+S++ ++M C NLR+LNL+ + + AG+ LA
Sbjct: 553 LTGTGLAHLNSLMALQHLDMSWCHNLTDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLA 612
Query: 235 GHLPNLEILSLS 246
L LE L LS
Sbjct: 613 P-LVALEHLDLS 623
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 173/367 (47%), Gaps = 47/367 (12%)
Query: 2 TC--LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL 58
TC LK L L +C +TDAG+ HL + L+ L LS+ LT G+A L+SL L L+L
Sbjct: 288 TCKNLKVLYLKKCCNLTDAGLSHLSPLVALQHLELSDCPRLTDAGLAHLTSLVALQYLNL 347
Query: 59 GGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TG 110
TD L L L L +L+L W ++ G A L L LNL G
Sbjct: 348 SECSNFTDAGLAHLTPLLTLTHLNLSWCYNFTHAGLAHLTPLVALQHLNLGHCRNITDAG 407
Query: 111 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+ L + +L+ LNL C+ ++ AG ++ A +++ S
Sbjct: 408 LAHLSPLVALQHLNLGWCS---------------NLTDAGLAHLSPLVALQHLDLGWCS- 451
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSA 228
+++++ L+ LT + AL+HLDLS + D + ++ + A L++L+LSN A
Sbjct: 452 -NLTDAGLAH---LTSLVALQHLDLSWCYYLTDAGLAHLSPLVA-LQHLDLSNCLSLKDA 506
Query: 229 GVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G+ L L L+ L+L+ + D +++++ + +L+ +D+S G
Sbjct: 507 GLAHLTL-LVTLKYLNLNKCHNLTDAGLAHLTPLVALQHLDLSQCP-----NLTGTGLAH 560
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDVSLHQLSSLS 346
+ SL ALQ+L+ NL +DA L L+ L HL+L + LTD L L+ L
Sbjct: 561 LNSLMALQHLDMSWCHNL-----TDAGLTHLTPLVNLRHLNLTKCPKLTDAGLAHLAPLV 615
Query: 347 KLTNLSI 353
L +L +
Sbjct: 616 ALEHLDL 622
>gi|149174147|ref|ZP_01852775.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
gi|148847127|gb|EDL61462.1| hypothetical protein PM8797T_13198 [Planctomyces maris DSM 8797]
Length = 476
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 55/261 (21%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTD ++ + + LWLS + +T GI L L L+L G VTD L L+ L
Sbjct: 267 VTDQILRDFNYWNKVSGLWLSRSKVTDAGIEYLRGATRLYSLNLSGTEVTDATLEHLKGL 326
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG--VTKLPNISSLECLNLSNCTIDS 132
+L ++L G+QVS RG VL++ + +A+ G V KL N + L LS+ +
Sbjct: 327 PELHSVNLRGTQVSPRG--VLELIASSDSMQIAFPGGWVWKLENAHGFQ-LKLSSPAVTG 383
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEH 192
L + L GT + Y++ ++ D +SL F
Sbjct: 384 EL-----------LKLFGTVRVQA-----YLDLDGIALTDEGLASLGGF----------- 416
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
+LR L +SNT+ SSAG+ LAG L +L L L G+ + D
Sbjct: 417 --------------------EDLRTLRISNTQISSAGLNHLAG-LASLRELDLRGSAVAD 455
Query: 253 YAISYMS-MMPSLKFIDISNT 272
I+ + +P+ K ID + T
Sbjct: 456 EDINKLQRALPNCK-IDWNET 475
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--K 275
L LS ++ + AG+ L G L L+LSGT++ D + ++ +P L +++ T + +
Sbjct: 284 LWLSRSKVTDAGIEYLRG-ATRLYSLNLSGTEVTDATLEHLKGLPELHSVNLRGTQVSPR 342
Query: 276 GFIQQVGAETDLVLSLTA-----LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
G ++ + + + ++ L+N H +L L V+ L T + +L L
Sbjct: 343 GVLELIASSDSMQIAFPGGWVWKLENA-HGFQLKLSSPAVTGELLKLFGTVRVQAYLDLD 401
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 390
+LTD L L L L I + ++++GL SL+ LDL G + ED I +
Sbjct: 402 GIALTDEGLASLGGFEDLRTLRISNTQISSAGLNHLAGLASLRELDLRGSAVADED-INK 460
Query: 391 FCKMHPRIEV-WHE 403
+ P ++ W+E
Sbjct: 461 LQRALPNCKIDWNE 474
>gi|17546076|ref|NP_519478.1| GALA protein 5 [Ralstonia solanacearum GMI1000]
gi|17428372|emb|CAD15059.1| lrr-gala family type III effector protein (gala 7) [Ralstonia
solanacearum GMI1000]
Length = 647
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 166/394 (42%), Gaps = 51/394 (12%)
Query: 4 LKELDLSRC----VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
L+ +DL C + A +++L ++ LE L + + G ALL+ ++L L++
Sbjct: 202 LRHIDLGECDPGCGAKSHAAIEYLATL-PLESLNVKGAAIGDRGAALLAGNRSLKTLNVA 260
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++++ R L LE LD+ G+Q+ RGA L + L L GVT P I +
Sbjct: 261 DGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTD-PGIQA 319
Query: 120 ------LECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINE------------- 156
L+ L++S I+ L N + L +S T + E
Sbjct: 320 LAGNRQLKSLDVSGNHINEDALRALAANPSLTTL-DVSCNRQTPVGEPQSVEQGVSMALA 378
Query: 157 -REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE-----HLDLSSSMIGDDSVEMVAC 210
E + ET L S N+ + F +M A L L S+ IG + + +A
Sbjct: 379 LAEGLVGRETPLASLKADGNAFVD---FAVEMLAFPTIRTASLSLKSNFIGPEGAQKLAE 435
Query: 211 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-- 268
A L++L+L+ + AG L+ H +L+ LS+ + D ++ P+L +D
Sbjct: 436 NPA-LKSLDLTRNKIGDAGAEALS-HSRSLKTLSVLNCDVKDPGAQALARNPTLTTLDLG 493
Query: 269 --ISNTDIKGFIQQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 320
IS QQ E D + AL L L+++ DA + PL+
Sbjct: 494 NLISEKQNPAARQQEQDEFDTTANEITENGTRALAQSPSLISLSVQGNLCEDAGVLPLAR 553
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L L++ ++T S +L+S LT+L++R
Sbjct: 554 SPRLTSLNVAYTNMTLESARELASNPVLTSLNVR 587
>gi|290981666|ref|XP_002673551.1| predicted protein [Naegleria gruberi]
gi|284087135|gb|EFC40807.1| predicted protein [Naegleria gruberi]
Length = 438
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+++MK L +LD+S++ IG+ VE V+ +G NL L + + G + L L L
Sbjct: 147 ISEMKQLTNLDISNNYIGETGVEYVSEMG-NLTTLTIIENNLRAEGCKKIR-KLKQLTRL 204
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 299
S+ +I ++S M L F++I+N I+ +I Q+G +
Sbjct: 205 SIYDNKIGAEGAKFISEMEQLMFLEINNNSIRNEGTEYISQLG----------------N 248
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L L++ ++ +S FK+L L + S LS+L++LT+L I + +
Sbjct: 249 LTELDISHNEIGSEGAKHISQFKQLTCLRFSYNKINAESFEYLSTLTQLTDLRICSSSIG 308
Query: 360 NSGLGSFKPPRSLKLLDLHG 379
+ + S +SL +L L+G
Sbjct: 309 DDSIKSITNLKSLTILYLNG 328
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 70/395 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LD+ R ++ G K + +S L+ L + + A+G L +L L+ L + +
Sbjct: 81 LTNLDI-RTNELGAEGAKFIGQLSQLKILNIGVNDICAEGAKYLVALNQLTNLGINCNRI 139
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNIS 118
+ +S+ + +L LD+ + + G + L+ L NL G K+ +
Sbjct: 140 GEEGAKSISEMKQLTNLDISNNYIGETGVEYVSEMGNLTTLTIIENNLRAEGCKKIRKLK 199
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L L++ + KI G FI+E E + FL+++N+S+
Sbjct: 200 QLTRLSIYD----------------NKIGAEGAKFISEMEQLM--------FLEINNNSI 235
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+++Q+ L LD+S + IG + + ++
Sbjct: 236 RNEGTEYISQLGNLTELDISHNEIGSEGAKHIS--------------------------Q 269
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L S +I+ + Y+S + L TD++ +G + S+ ++ N
Sbjct: 270 FKQLTCLRFSYNKINAESFEYLSTLTQL-------TDLRICSSSIGDD-----SIKSITN 317
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L L L +SD +S +L LS+ +++D LS L++LT L +
Sbjct: 318 LKSLTILYLNGNNISDNGCKNISELTQLTDLSMALNNISDEGCKFLSQLTQLTELDVSYN 377
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
+ N G + LK L + + E I Q
Sbjct: 378 RIGNIGAEYINEMKQLKHLAIQANNIRNESKIDQL 412
>gi|290994542|ref|XP_002679891.1| predicted protein [Naegleria gruberi]
gi|284093509|gb|EFC47147.1| predicted protein [Naegleria gruberi]
Length = 359
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 160/355 (45%), Gaps = 46/355 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LD+S + V G + +++ L L +S L G ++ + L+ L++ +
Sbjct: 41 LTKLDVSSWL-VNAEGANMISNLAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNI 99
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
+S+ +T+L LD+ + + N GA+ + +L+ L+++ G+ L +I+
Sbjct: 100 NAGGTKSICEMTQLTDLDISNNFIGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHIN 159
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L CLN+S+C I G+E A L E L+ L++S++ +
Sbjct: 160 NLICLNISSCKI-----GDEG-------------------ARLISEMKQLTTLEISHNEI 195
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ +++M L L++ +++G++ + + L L++S+ R S G L+
Sbjct: 196 GSYGSKAISEMYQLTKLNIRYNVLGNEGAHYIGIM-EQLTELDISHNRISGEGAKSLS-K 253
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L L ++ +I D + +S + L ++DI +I +G T L++ ++ L
Sbjct: 254 LSQLTKLDINTNEIGDEGMKSISKLDQLLYLDIGENEIG----DIG--TGLIIGMSKLT- 306
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L + +V + L+ +L L + N + D SL LS L L N
Sbjct: 307 -----ELLINDNRVGNDGAESLAQMHQLTQLDICNNPVNDDSLELLSKLPDLINF 356
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 31/304 (10%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
L L LD+ +Q+ RG+ +++ +L+ LN++ + S E L++ I +
Sbjct: 62 LAHLADLDISNNQLLERGSKIIREMTQLTKLNISRNNINAGGTKSICEMTQLTDLDISNN 121
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
GNE + + + T ++ E + +E + S ++N L L
Sbjct: 122 FIGNEGASYIG--GMTKLTNLSISENHIGVE-GIKSLFHINN--------------LICL 164
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
++SS IGD+ +++ + L L +S+ S G ++ + L L++ + +
Sbjct: 165 NISSCKIGDEGARLISEM-KQLTTLEISHNEIGSYGSKAIS-EMYQLTKLNIRYNVLGNE 222
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
Y+ +M L +DIS+ I G GA+ +L L+ L +L++ ++ D
Sbjct: 223 GAHYIGIMEQLTELDISHNRISG----EGAK--------SLSKLSQLTKLDINTNEIGDE 270
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
+ +S +L++L + + D+ + +SKLT L I D + N G S L
Sbjct: 271 GMKSISKLDQLLYLDIGENEIGDIGTGLIIGMSKLTELLINDNRVGNDGAESLAQMHQLT 330
Query: 374 LLDL 377
LD+
Sbjct: 331 QLDI 334
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 48/274 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT L +LD+S + + G ++ ++ L L +SE + +GI L + NL L++
Sbjct: 110 MTQLTDLDISNNF-IGNEGASYIGGMTKLTNLSISENHIGVEGIKSLFHINNLICLNISS 168
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ D R + + +L L++ +++ + G+ + +L+ LN+ +
Sbjct: 169 CKIGDEGARLISEMKQLTTLEISHNEIGSYGSKAISEMYQLTKLNIRYN----------- 217
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+ GNE G +I E L+ LD+S++ +S
Sbjct: 218 -------------VLGNE-----------GAHYIGIMEQ--------LTELDISHNRISG 245
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
L+++ L LD++++ IGD+ ++ ++ + L L++ G G++ G +
Sbjct: 246 EGAKSLSKLSQLTKLDINTNEIGDEGMKSISKL-DQLLYLDIGENEIGDIGTGLIIG-MS 303
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L L ++ ++ + ++ M L +DI N
Sbjct: 304 KLTELLINDNRVGNDGAESLAQMHQLTQLDICNN 337
>gi|343419347|emb|CCD19427.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1478
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 183/398 (45%), Gaps = 70/398 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ DLS C +TD + L ++S LE L LS A G+ L SL+ L L L L +
Sbjct: 472 LRTFDLSHCTGITD--VSPLSTLSGLEVLNLSGCTGVASGVDSLCSLRMLRELRLSRLAI 529
Query: 64 TDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNIS 118
D VLR + VL L LDL + ++N + L L LNL+ T ++ L +++
Sbjct: 530 NDAVLRDIVVLKCLRTLDLSHCTGITN--VSPLSTLSGLEVLNLSGCADITDISPLSDLN 587
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSFLD 172
+ LNLS CT G + +PL+K+S L T I + I S L LD
Sbjct: 588 IMHTLNLSFCT------GITDVSPLSKLSRLETLNLMYCTGITDVSPLSLI--SNLRTLD 639
Query: 173 VSNSS-LSRFCFLTQMKALEHLDLS-----------SSMIGDDSVEMVACVG-------- 212
+S+ + ++ L+ + L LDLS S +I + +++ C G
Sbjct: 640 LSHCTGITDVSPLSLISNLRTLDLSHCTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLS 699
Query: 213 --ANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSL-SGTQIDDYAISYMSMMPSLKFI 267
+ L LNL G+ ++ L LE L+L T I D +S +S M SL +
Sbjct: 700 KLSRLETLNL----MYCTGITDVSPLSKLSRLETLNLMYCTGITD--VSPLSKMSSLYTL 753
Query: 268 DISN----TDIKGFIQQVGAET-DL-----VLSLTALQNLNHLERLNLEQ-TQVSDATLF 316
++S TD+ + ET DL + ++ L L+ LE LNL T ++D +
Sbjct: 754 NLSYCTGITDVSPLSMLIRLETLDLTGCTGITDVSPLSKLSRLETLNLRYCTGITDVS-- 811
Query: 317 PLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 353
PLS L L+L + +TDVS LS LS+L L++
Sbjct: 812 PLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNL 847
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 188/404 (46%), Gaps = 63/404 (15%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGL 61
CL+ LDLS C +TD + L +S+L L LS TG+T ++ LS L +L DL
Sbjct: 425 CLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGIT--DVSPLSKLSSLRTFDLSHC 480
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGA---AVLKMFPRLSFLNLAWTGVTKLPNI 117
+TD + L L+ LE L+L G G L+M L LA L +I
Sbjct: 481 TGITD--VSPLSTLSGLEVLNLSGCTGVASGVDSLCSLRMLRELRLSRLAINDAV-LRDI 537
Query: 118 SSLEC---LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
L+C L+LS+CT G N +PL+ +L+G +N + S LS L++
Sbjct: 538 VVLKCLRTLDLSHCT------GITNVSPLS--TLSGLEVLNLSGCADITDISPLSDLNIM 589
Query: 175 NSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
++ FC L+++ LE L+L G V ++ + +NLR L+LS+
Sbjct: 590 HTLNLSFCTGITDVSPLSKLSRLETLNLMYCT-GITDVSPLSLI-SNLRTLDLSH----C 643
Query: 228 AGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
G+ ++ + NL L LS T I D + +SM+ L+ +D+S
Sbjct: 644 TGITDVSPLSLISNLRTLDLSHCTGITD--VPPLSMLIRLEKLDLSG---------CTGI 692
Query: 285 TDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQ 341
TD ++ L L+ LE LNL T ++D + PLS L L+L + +TDVS L +
Sbjct: 693 TD----VSPLSKLSRLETLNLMYCTGITDVS--PLSKLSRLETLNLMYCTGITDVSPLSK 746
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+SSL L NLS + S L L+ LDL G +T+
Sbjct: 747 MSSLYTL-NLSYCTGITDVSPLSMLI---RLETLDLTGCTGITD 786
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 174/377 (46%), Gaps = 60/377 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L+ L+L C +TD + L +S+L L LS TG+T ++ LS L L LDL G
Sbjct: 727 LETLNLMYCTGITD--VSPLSKMSSLYTLNLSYCTGIT--DVSPLSMLIRLETLDLTGCT 782
Query: 63 -VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPN 116
+TD+ L L++LE L+L + + +++ + L RL LNL + T V+ L
Sbjct: 783 GITDV--SPLSKLSRLETLNLRYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSK 838
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+S LE LNL CT G + +PL+ IS N R L T + DVS
Sbjct: 839 LSRLETLNLMYCT------GITDVSPLSLIS-------NLRTLDLSHCTGI---TDVSPL 882
Query: 177 SL-SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG----------ANLRNLNLSNT 223
SL S C +L+ + + S +I + +++ C G + L LNL
Sbjct: 883 SLMSNLCSLYLSHCTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLSKLSRLETLNL--- 939
Query: 224 RFSSAGVGILA--GHLPNLEILSL-SGTQIDDYA-ISYMSMMPSLKFIDISN-TDI---K 275
G+ ++ L LE L+L T I D + +S +S + +L + + TD+
Sbjct: 940 -MYCTGITDVSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGITDVSPLS 998
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERL-NLEQTQVSDAT-LFPLSTFKELIHLSLRNAS 333
FI + +T + L+ L RL NL + ++ T + PLST L L L +
Sbjct: 999 DFINLRTLDLSFYTGITDVSPLSMLIRLENLSLSNIAGITDVSPLSTLIRLNVLYLSGCT 1058
Query: 334 -LTDVS-LHQLSSLSKL 348
+TDVS L +LSSL L
Sbjct: 1059 GITDVSPLSKLSSLRTL 1075
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 179/398 (44%), Gaps = 72/398 (18%)
Query: 4 LKELDLSRCVKVTDAG-MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L+ L+L C +TD + L + TL ++ TG+T ++ LS NL LDL
Sbjct: 957 LETLNLMYCTGITDVSPLSKLSRLETLNLMYC--TGIT--DVSPLSDFINLRTLDLSFYT 1012
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLA-WTGVTK---LPN 116
+TD+ L +L +LE L L S ++ + L RL+ L L+ TG+T L
Sbjct: 1013 GITDV--SPLSMLIRLENLSL--SNIAGITDVSPLSTLIRLNVLYLSGCTGITDVSPLSK 1068
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS---------LAGTTFINEREAFLYIETSL 167
+SSL L+LS+CT G + +PL+K+S G T ++ + T
Sbjct: 1069 LSSLRTLDLSHCT------GITDVSPLSKLSRLETLNLMYCTGITDVSPLSLISNLRTLD 1122
Query: 168 LS----FLDVSNSSL-SRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG-------- 212
LS DVS SL S C +L+ + + S +I + +++ C G
Sbjct: 1123 LSHCTGITDVSPLSLMSNLCSLYLSHCTGITDVPPLSMLIRLEKLDLSGCTGITDVSPLS 1182
Query: 213 --ANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFI 267
+ L LNL G+ ++ + NL L LS T I D +S +SM+ L+ +
Sbjct: 1183 KLSRLETLNL----MYCTGITDVSPLSLMSNLCSLYLSHCTGITD--VSPLSMLIRLEKL 1236
Query: 268 DISN----TDIKGFIQQVGAET------DLVLSLTALQNLNHLERLNLEQ-TQVSDATLF 316
D+S TD+ + ET + ++ L L+ LE LNL T ++D +
Sbjct: 1237 DLSGCTGITDVSPLSKLSRLETLNLMYCTGITDVSPLSKLSRLETLNLMYCTGITDVS-- 1294
Query: 317 PLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSI 353
PLS L L L + + +TDV LS LS+L L++
Sbjct: 1295 PLSLMSNLCSLYLSHCTGITDVP--PLSKLSRLETLNL 1330
>gi|283778672|ref|YP_003369427.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
gi|283437125|gb|ADB15567.1| hypothetical protein Psta_0882 [Pirellula staleyi DSM 6068]
Length = 450
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 45/261 (17%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDA + L I +++L+L T L+ G+A L+ L +L L L LP+ D L+ L
Sbjct: 215 VTDAVLPKLAKIPEIKRLFLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF 274
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
KL L L ++V++ G L P+ + L+ W T++ + LE +S T+ S+
Sbjct: 275 PKLMSLGLDFTEVTDAG---LTKLPKFAMLDTLWLDATRVTDEGMLEVAKIS--TLRSL- 328
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
F+ + F L ++ +L +L
Sbjct: 329 -----------------------------------FMPATQVKGPGFSHLMKLASLRYLS 353
Query: 195 LSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
L + D V + VG N+ L L +T + + L G + L+ L LS T + D
Sbjct: 354 LKGVQL--DDVALQHLVGLENIEILGLDHTNVTDKQIEQLVG-MTRLKTLWLSKTAVTDG 410
Query: 254 AISYMSMMPSLKFIDISNTDI 274
AI +S + SL+ + + +++
Sbjct: 411 AIESLSKIRSLQTVYLHGSEV 431
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
+VTD GM + ISTL L++ T + G + L L +L L L G+ + D+ L+ L
Sbjct: 308 ATRVTDEGMLEVAKISTLRSLFMPATQVKGPGFSHLMKLASLRYLSLKGVQLDDVALQHL 367
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLS 126
L +E L L + V+++ L RL L L+ T VT L I SL+ + L
Sbjct: 368 VGLENIEILGLDHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIESLSKIRSLQTVYLH 427
Query: 127 NCTIDS 132
+ +
Sbjct: 428 GSEVSA 433
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
FL + S L + LE+L L I D ++ + L +L L T + AG
Sbjct: 233 FLGSTKLSGGGLATLAPLVDLEYLSLKQLPIDDRDLQELPEF-PKLMSLGLDFTEVTDAG 291
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
+ L L+ L L T++ D + ++ + +L+ + + T +KG
Sbjct: 292 LTKLP-KFAMLDTLWLDATRVTDEGMLEVAKISTLRSLFMPATQVKGP------------ 338
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+ L L L L+L+ Q+ D L L + + L L + ++TD + QL +++L
Sbjct: 339 GFSHLMKLASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQLVGMTRLK 398
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L + +T+ + S RSL+ + LHG
Sbjct: 399 TLWLSKTAVTDGAIESLSKIRSLQTVYLHG 428
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
+ V++ D ++HL+ + +E L L T +T I L + L L L VTD + S
Sbjct: 355 KGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQLVGMTRLKTLWLSKTAVTDGAIES 414
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLK 96
L + L+ + L GS+VS GA L+
Sbjct: 415 LSKIRSLQTVYLHGSEVSADGAERLR 440
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VTDAG+ L + L+ LWL T +T +G+ ++ + L L + V L
Sbjct: 286 EVTDAGLTKLPKFAMLDTLWLDATRVTDEGMLEVAKISTLRSLFMPATQVKGPGFSHLMK 345
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNC 128
L L YL L G Q+ + L + L L T VT +L ++ L+ L LS
Sbjct: 346 LASLRYLSLKGVQLDDVALQHLVGLENIEILGLDHTNVTDKQIEQLVGMTRLKTLWLSKT 405
Query: 129 TI-DSILEGNENKAPLAKISLAGT 151
+ D +E L + L G+
Sbjct: 406 AVTDGAIESLSKIRSLQTVYLHGS 429
>gi|46446776|ref|YP_008141.1| hypothetical protein pc1142 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400417|emb|CAF23866.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 590
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 176/395 (44%), Gaps = 82/395 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
+K L +C VTDAG+ HL ++ L+ L LS+ LT G+A L++L L LDL G
Sbjct: 252 VKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCW 311
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+TD L L L L++L L + NL G+ L ++++L+
Sbjct: 312 NLTDSGLVHLTPLVGLQHLGLSDCE------------------NLTVAGLAHLTSLTALQ 353
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
L+L NC +++++ L+
Sbjct: 354 HLDLRNC------------------------------------------YNLTDAGLAH- 370
Query: 182 CFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPN 239
LT + AL+HLDLS + D + + + A L++LNL R + AG+ L L
Sbjct: 371 --LTPLTALQHLDLSCCYNLTDAGLAHLTPLTA-LQHLNLCCCRKLTDAGLAHLTP-LTA 426
Query: 240 LEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
L+ L LS + D +++++ + +L +++S + GA + L ALQ+LN
Sbjct: 427 LQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSEC-----WKLTGAGLAHLTPLVALQHLN 481
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLS-IRDA 356
L + N ++DA L L+ L HL+L TD L L+ L+ L +L I
Sbjct: 482 -LSKCN----NLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCN 536
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
LT++GL P +L+ LDL G LT+ + +F
Sbjct: 537 NLTDAGLVHLTPLTALQYLDLIGCKNLTDAGLERF 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDL C +TDAG+ HL ++ L+ L LS LT G+A L+ L L L+L
Sbjct: 349 LTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGLAHLTPLTALQHLNLC 408
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA--W----TGV 111
+TD L L LT L++LDL + +++ G A L L LNL+ W G+
Sbjct: 409 CCRKLTDAGLAHLTPLTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGL 468
Query: 112 TKLPNISSLECLNLSNC 128
L + +L+ LNLS C
Sbjct: 469 AHLTPLVALQHLNLSKC 485
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 141/305 (46%), Gaps = 57/305 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL-----W-LSETG---------------- 38
+T L+ L LS C +TDAG+ HL +++ L+ L W L+++G
Sbjct: 274 LTALQHLGLSDCENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHLTPLVGLQHLGLS 333
Query: 39 ----LTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 92
LT G+A L+SL L LDL +TD L L LT L++LDL +++ G
Sbjct: 334 DCENLTVAGLAHLTSLTALQHLDLRNCYNLTDAGLAHLTPLTALQHLDLSCCYNLTDAGL 393
Query: 93 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
A L L LNL G+ L +++L+ L+LS C +
Sbjct: 394 AHLTPLTALQHLNLCCCRKLTDAGLAHLTPLTALQHLDLSYC---------------YNL 438
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSV 205
+ AG + A L++ S ++ + L+ LT + AL+HL+LS + + D +
Sbjct: 439 TDAGLAHLTPLTALLHLNLS--ECWKLTGAGLAH---LTPLVALQHLNLSKCNNLTDAGL 493
Query: 206 EMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 264
+A + A L++LNLS +F+ AG+ L + + + D + +++ + +L
Sbjct: 494 VHLAPLTA-LQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGLVHLTPLTAL 552
Query: 265 KFIDI 269
+++D+
Sbjct: 553 QYLDL 557
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL ++ L L LSE LT G+A L+ L L L+L
Sbjct: 424 LTALQHLDLSYCYNLTDAGLAHLTPLTALLHLNLSECWKLTGAGLAHLTPLVALQHLNLS 483
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGV 111
+TD L L LT L++L+L W + ++ G A L + L L NL G+
Sbjct: 484 KCNNLTDAGLVHLAPLTALQHLNLSWCKKFTDAGLAHLTLLTALQSLDLIGCNNLTDAGL 543
Query: 112 TKLPNISSLECLNLSNCT--IDSILEGNENKAPLAKISL 148
L +++L+ L+L C D+ LE + A L +++
Sbjct: 544 VHLTPLTALQYLDLIGCKNLTDAGLERFKTLAALPNLTI 582
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 298 NHLERLN-LEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD 355
N +E LN LE T +++A L L K + L + +TD L L+ L+ L +L + D
Sbjct: 225 NKIEALNFLENTHLTNAHLLALKDCKNVKVLYFKKCRDVTDAGLAHLTPLTALQHLGLSD 284
Query: 356 AV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
LT++GL +L+ LDL G W LT+ ++
Sbjct: 285 CENLTDAGLAHLTTLTALQHLDLSGCWNLTDSGLVHL 321
>gi|83748568|ref|ZP_00945588.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
gi|83724776|gb|EAP71934.1| Leucine-rich repeat family protein [Ralstonia solanacearum UW551]
Length = 629
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 159/380 (41%), Gaps = 49/380 (12%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
E+ S V++AG+ LL+ L+ L L+ + A+G LL++ +L+ L L G + D
Sbjct: 171 EIGRSTGSGVSNAGLA-LLATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGD 229
Query: 66 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSL 120
+L + LDL + + GA L P +S LNL G+ L +L
Sbjct: 230 RAATALAQSRSIASLDLSVNMIGPDGARALAGAPLVS-LNLHNNGIGDEGALALATSGTL 288
Query: 121 ECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
+ LN SN I D+ + G + L +++LAG I A + L+ LD+S + L
Sbjct: 289 KSLNASNNGIGDAGVLGFADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLG 347
Query: 180 RFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA--------- 228
L ++L L++ ++ IGDD E +A L++LNLS R
Sbjct: 348 DAGAQVLAGSRSLTSLNVRNNEIGDDGTEALA-RNTTLKSLNLSYNRIGLQGAGALGGNT 406
Query: 229 ---------------GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
G LA + ++ L L +I D ++ + +L +D+S +
Sbjct: 407 TLSELDLRACAIDPYGASALARNT-SVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNN 465
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
I QV A D ++S LNL+ ++ D L+ L L+L +
Sbjct: 466 IHDAGAQVLAGNDSLMS------------LNLDDNEIGDDGTAALAQHPRLTSLNLASNR 513
Query: 334 LTDVSLHQLSSLSKLTNLSI 353
+ L+ + LT L +
Sbjct: 514 IGPTGAQHLAKSATLTELDL 533
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 141/343 (41%), Gaps = 22/343 (6%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 274 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRN 333
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLS-NC 128
T L LDL +++ + GA VL L+ LN + G L ++L+ LNLS N
Sbjct: 334 TSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTEALARNTTLKSLNLSYNR 393
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQM 187
L+++ L + L TS+ S SN S + +
Sbjct: 394 IGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHLGSNRIGDSGARAIATI 453
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+ L LDLS + I D +++A +L +LNL + G LA H P L L+L+
Sbjct: 454 RTLTLLDLSRNNIHDAGAQVLAG-NDSLMSLNLDDNEIGDDGTAALAQH-PRLTSLNLAS 511
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
+I +++ +L +D+S ++G E LSL+ + L LN+
Sbjct: 512 NRIGPTGAQHLAKSATLTELDLSE-------NRIGPEGAEALSLSTV-----LTTLNVSG 559
Query: 308 TQVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
+ +A + L L RN + + L + ++LT
Sbjct: 560 NAIGEAGARAFAEKSTSLTSLDARNNRMGEAGAKMLEANTRLT 602
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L ELDL C + G L +++ L L + G +++++ L++LDL
Sbjct: 406 TTLSELDLRACA-IDPYGASALARNTSVASLHLGSNRIGDSGARAIATIRTLTLLDLSRN 464
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ D + L L L+L +++ + G A L PRL+ LNLA TG L
Sbjct: 465 NIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAK 524
Query: 117 ISSLECLNLSNCTIDSILEGNEN---KAPLAKISLAGTTFINEREAFLYIETSL-LSFLD 172
++L L+LS I EG E L ++++G I E A + E S L+ LD
Sbjct: 525 SATLTELDLSENRIGP--EGAEALSLSTVLTTLNVSGNA-IGEAGARAFAEKSTSLTSLD 581
Query: 173 VSNSSL 178
N+ +
Sbjct: 582 ARNNRM 587
>gi|44888782|gb|AAS48163.1| LLR protein WM1.1 [Aegilops tauschii]
Length = 1032
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 181/445 (40%), Gaps = 88/445 (19%)
Query: 23 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ L+ L LS G + LL S+ NL L+L G+P T + L L+KL+Y
Sbjct: 118 LLSLKRLKHLDLSMNCLLGTNSQIPHLLGSMGNLRYLNLSGIPFTGRMPSHLGNLSKLQY 177
Query: 80 LDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT---GVTKLPN----ISSLECLNLSNCTID 131
LDL + + + L P L FL++ G+ P+ I SL ++LSNC +D
Sbjct: 178 LDLGYCPAMYSTDITWLTKLPFLKFLSMRGVMLPGIADWPHTLNMIPSLRVIDLSNCLLD 237
Query: 132 SILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRF------- 181
+ + N L K+ L F + + + + + L +LD+ N+ L +F
Sbjct: 238 YANQSLQHVNLTKLEKLDLFNNYFEHSLASGWFWKATSLKYLDLGNNRLFGQFPDTLGNM 297
Query: 182 -------------------CFLTQMKALEHLDLSSSMI-GDDSVEMVA---CVGANLRNL 218
L + LE +DLS + I GD +V M + C L+ +
Sbjct: 298 TNLQVLDISENWNPHMMMAGNLENLCGLEIIDLSYNYINGDIAVLMESLPQCTRKKLQEM 357
Query: 219 NLSNTRFSSAGVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
+L F+ G LPN L ILSLSG + ++ + L +++ +
Sbjct: 358 DLRYNNFT--------GTLPNLVSDFTRLRILSLSGNNLVGSIPPWLVNLTRLTTLELFS 409
Query: 272 TDIKG----FIQQVGAETDLVLS---LTA-----LQNLNHLERLNLEQTQVSDATLFPLS 319
+ G ++ + T L LS LT L +L L+L ++++ +
Sbjct: 410 NHLTGSIPPWLGNLTCLTSLELSDNLLTGSIPAEFGKLMYLTILDLSSNHLNESVPAEIG 469
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG---SFKPPRSLKLLD 376
+ LI L L N S T V + L+ LT+L D L N + ++ P +L
Sbjct: 470 SLVNLIFLDLSNNSFTGVITEE--HLANLTSLKQIDLSLNNFKIALNSDWRAPSTL---- 523
Query: 377 LHGGWLLTEDAILQFCKMHPRIEVW 401
E A C+M P W
Sbjct: 524 --------ESAWFASCQMGPLFPPW 540
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 32/284 (11%)
Query: 1 MTCLKELDLSR--CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
+TCL L+LS A L+ ++ L+ LS L A + SL NL LDL
Sbjct: 423 LTCLTSLELSDNLLTGSIPAEFGKLMYLTILD---LSSNHLNESVPAEIGSLVNLIFLDL 479
Query: 59 GGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
T ++ L LT L+ +DL ++N A LN W + P
Sbjct: 480 SNNSFTGVITEEHLANLTSLKQIDL---SLNNFKIA----------LNSDW----RAP-- 520
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
S+LE ++C + + + + + ++ T+ E + + S +++LD+SN+
Sbjct: 521 STLESAWFASCQMGPLFPPWLQQLKITALDISTTSLKGEFPDWFWSAFSNVTYLDISNNQ 580
Query: 178 LS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+S A E L L S+ + + + N+ L++SN FS L
Sbjct: 581 ISGNLPAHMDSMAFEKLYLRSNRL----TGPIPTLPTNITLLDISNNTFSETIPSNLVA- 635
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
P LEIL + QI Y + + L ++D+SN ++G + Q
Sbjct: 636 -PRLEILCMHSNQIGGYIPESICKLEQLIYLDLSNNILEGEVPQ 678
>gi|149178243|ref|ZP_01856836.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
gi|148842892|gb|EDL57262.1| leucine-rich repeat domain protein [Planctomyces maris DSM 8797]
Length = 254
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+TD +K L +S ++ L L T +T+ G+A L L+ L+ L L V D L+ LQ
Sbjct: 65 KITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLKHLQQ 124
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------LPNISSLECLNLSN 127
L LEYL+L+G+++++ G + L +L L + T VT+ I+ LE + L
Sbjct: 125 LPNLEYLNLYGTEITDAGLSQLSSLKKLKRLYVWQTKVTRPAGLALQEQITGLEVIGLPE 184
Query: 128 CTIDSILEGNENKAPLAKISLAGTT 152
E E P+ K A T
Sbjct: 185 EPKPVAAEKPELPKPVEKKPEAKKT 209
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L LQ+L L L+LE+T+V+DA L L L +L+L +TD L QLSSL KL
Sbjct: 95 LAQLQHLKALTHLHLEKTKVNDAGLKHLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLKR 154
Query: 351 LSI 353
L +
Sbjct: 155 LYV 157
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
LS+ +T + + L+ L + L+L G VT L LQ L L +L L ++V++ G
Sbjct: 61 LSDQKITDETLKTLAGLSKVDSLNLRGTEVTSAGLAQLQHLKALTHLHLEKTKVNDAGLK 120
Query: 94 VLKMFPRLSFLNLAWTGVTK--LPNISSLECLN 124
L+ P L +LNL T +T L +SSL+ L
Sbjct: 121 HLQQLPNLEYLNLYGTEITDAGLSQLSSLKKLK 153
>gi|207743293|ref|YP_002259685.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
gi|206594690|emb|CAQ61617.1| type III effector gala6 protein [Ralstonia solanacearum IPO1609]
Length = 625
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 159/380 (41%), Gaps = 49/380 (12%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
E+ S V++AG+ LL+ L+ L L+ + A+G LL++ +L+ L L G + D
Sbjct: 167 EIGRSTGSGVSNAGLA-LLATRPLKSLSLNGIEIDAEGARLLATCASLTSLSLTGCSIGD 225
Query: 66 LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSL 120
+L + LDL + + GA L P +S LNL G+ L +L
Sbjct: 226 RAATALAQSRSIASLDLSVNMIGPDGARALAGAPLVS-LNLHNNGIGDEGALALATSGTL 284
Query: 121 ECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
+ LN SN I D+ + G + L +++LAG I A + L+ LD+S + L
Sbjct: 285 KSLNASNNGIGDAGVLGFADNTVLTQLNLAG-NMIGPAGARALRRNTSLTELDLSTNRLG 343
Query: 180 RFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA--------- 228
L ++L L++ ++ IGDD E +A L++LNLS R
Sbjct: 344 DAGAQVLAGSRSLTSLNVRNNEIGDDGTEALA-RNTTLKSLNLSYNRIGLQGAGALGGNT 402
Query: 229 ---------------GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
G LA + ++ L L +I D ++ + +L +D+S +
Sbjct: 403 TLSELDLRACAIDPYGASALARNT-SVASLHLGSNRIGDSGARAIATIRTLTLLDLSRNN 461
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
I QV A D ++S LNL+ ++ D L+ L L+L +
Sbjct: 462 IHDAGAQVLAGNDSLMS------------LNLDDNEIGDDGTAALAQHPRLTSLNLASNR 509
Query: 334 LTDVSLHQLSSLSKLTNLSI 353
+ L+ + LT L +
Sbjct: 510 IGPTGAQHLAKSATLTELDL 529
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 142/346 (41%), Gaps = 28/346 (8%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G L + TL+ L S G+ G+ + L+ L+L G + R+L+
Sbjct: 270 IGDEGALALATSGTLKSLNASNNGIGDAGVLGFADNTVLTQLNLAGNMIGPAGARALRRN 329
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLS-NC 128
T L LDL +++ + GA VL L+ LN + G L ++L+ LNLS N
Sbjct: 330 TSLTELDLSTNRLGDAGAQVLAGSRSLTSLNVRNNEIGDDGTEALARNTTLKSLNLSYNR 389
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQM 187
L+++ L + L TS+ S SN S + +
Sbjct: 390 IGLQGAGALGGNTTLSELDLRACAIDPYGASALARNTSVASLHLGSNRIGDSGARAIATI 449
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+ L LDLS + I D +++A +L +LNL + G LA H P L L+L+
Sbjct: 450 RTLTLLDLSRNNIHDAGAQVLAG-NDSLMSLNLDDNEIGDDGTAALAQH-PRLTSLNLAS 507
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
+I +++ +L +D+S ++G E LSL+ + L LN+
Sbjct: 508 NRIGPTGAQHLAKSATLTELDLSE-------NRIGPEGAEALSLSTV-----LTTLNVSG 555
Query: 308 TQVSDATLFPLSTFKE----LIHLSLRNASLTDVSLHQLSSLSKLT 349
+ +A F E L L RN + + L + ++LT
Sbjct: 556 NAIGEAG---ARAFAEKSTSLTSLDARNNRMGEAGAKMLEANTRLT 598
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L ELDL C + G L +++ L L + G +++++ L++LDL
Sbjct: 402 TTLSELDLRACA-IDPYGASALARNTSVASLHLGSNRIGDSGARAIATIRTLTLLDLSRN 460
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ D + L L L+L +++ + G A L PRL+ LNLA TG L
Sbjct: 461 NIHDAGAQVLAGNDSLMSLNLDDNEIGDDGTAALAQHPRLTSLNLASNRIGPTGAQHLAK 520
Query: 117 ISSLECLNLSNCTIDSILEGNEN---KAPLAKISLAGTTFINEREAFLYIETSL-LSFLD 172
++L L+LS I EG E L ++++G I E A + E S L+ LD
Sbjct: 521 SATLTELDLSENRIGP--EGAEALSLSTVLTTLNVSGNA-IGEAGARAFAEKSTSLTSLD 577
Query: 173 VSNSSL 178
N+ +
Sbjct: 578 ARNNRM 583
>gi|290977929|ref|XP_002671689.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284085260|gb|EFC38945.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 434
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 35/269 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L++ + D G + + I TL L + + G+T+ G + L L+ L++G +
Sbjct: 120 LKRLEIGDNQQFGDCGAESISKIKTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGNNKI 179
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNIS 118
D ++ + L+ L L + +++++ ++ L+ L++ VT + +I
Sbjct: 180 MDSGMKFIGKLSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSNPVTIEDAKSISSIH 239
Query: 119 SLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
L+ LN+SN I +EG + + L +SLA NE LLS
Sbjct: 240 GLKSLNISNTGIS--VEGLKYLSALTLLTNLSLAKNNITNE---------GLLS------ 282
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
++QMK + L L ++I D ++++ + NLR LN+S T+ ++ G+ +
Sbjct: 283 --------ISQMKQITKLFLQHNVIDCDGAQLLSTM-TNLRLLNISQTKITTEGIKHITS 333
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSL 264
L N+ L++S Q++D A+ +S M L
Sbjct: 334 -LKNITSLNISINQLNDEALKLVSSMNQL 361
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 51/344 (14%)
Query: 30 EKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV----TDLVLRSLQVLTKLEYLDLWGS 85
EKLWL +GI+ + ++ S +G + +++ +S L +LE D
Sbjct: 72 EKLWLCFIKEQQEGISRIFNIGVDSFRVVGSYFIDSINAEIISKSFPNLKRLEIGD--NQ 129
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENK 140
Q + GA + L+ LN+ G+T + ++ L LN+ N
Sbjct: 130 QFGDCGAESISKIKTLTSLNVLDCGITSKGAEFIGLLNGLTYLNIGN------------- 176
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSS 198
KI +G FI + S L+ L + ++ ++ F + MK L L + S+
Sbjct: 177 ---NKIMDSGMKFIGK--------LSSLNVLQIGSTEITSESFKLVGCMKGLTSLSIYSN 225
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
+ + + ++ + L++LN+SNT S G+ L+ L L LSL+ I + + +
Sbjct: 226 PVTIEDAKSISSIHG-LKSLNISNTGISVEGLKYLSA-LTLLTNLSLAKNNITNEGLLSI 283
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
S M + K F+Q + D L+ + NL LN+ QT+++ + +
Sbjct: 284 SQMKQIT---------KLFLQHNVIDCDGAQLLSTMTNL---RLLNISQTKITTEGIKHI 331
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
++ K + L++ L D +L +SS+++LTNLS + LT+ G
Sbjct: 332 TSLKNITSLNISINQLNDEALKLVSSMNQLTNLSTHNNKLTSEG 375
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G + L +++ L L +S+T +T +GI ++SL+N++ L++ + D L+ + + +L
Sbjct: 303 GAQLLSTMTNLRLLNISQTKITTEGIKHITSLKNITSLNISINQLNDEALKLVSSMNQLT 362
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI 133
L +++++ GA + L+ LN++ G L +++L+ +N+SNC I
Sbjct: 363 NLSTHNNKLTSEGAKHISQLNNLTELNISSNPVRIEGANYLNQMTTLKIINVSNCRT-GI 421
Query: 134 LEGNEN 139
+ N N
Sbjct: 422 FQWNNN 427
>gi|168701995|ref|ZP_02734272.1| hypothetical protein GobsU_20883 [Gemmata obscuriglobus UQM 2246]
Length = 684
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 46/370 (12%)
Query: 53 LSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L+ DL V D L L+ L + L G++V++ G A LK L+ LNLA++GVT
Sbjct: 41 LTAADLTDRAVADADLARLKDCQALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVT 100
Query: 113 K--LPNISS---LECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
L ++++ L L + T+ D+ L L I L+GT A L
Sbjct: 101 DAGLADLNAFPLLTSLWVQGTTVSDAGLAVARELPALTHIDLSGTKVTGPGLAHLKGLKG 160
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L L + + + C+L + + L LS + + D + + + A L L++ TR +
Sbjct: 161 LTLLLSGTALTDANLCYLKGLTGVVELSLSDTPLTDAGLSHLHDLKA-LGTLDVRKTRAT 219
Query: 227 SAGVGIL------------AGHLPNLEILSLSGTQI--------------DDYAISYMSM 260
A + L AG P L++ L+ + D A + +
Sbjct: 220 PASLAELHKSVPGCRIRDSAGDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQ 279
Query: 261 MP-SLKFIDISNTDIK----GFIQQVGAETDLVL--------SLTALQNLNHLERLNLEQ 307
P +L +++S+ +K G + T+LVL +L L+NL L+ L+L
Sbjct: 280 GPLALARVNLSDRSVKDDDLGRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTG 339
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
T V+DA L + K L L L + +T+ L L+ L+ L+++ + ++++GL K
Sbjct: 340 TDVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLK 399
Query: 368 PPRSLKLLDL 377
LK L L
Sbjct: 400 GLTDLKTLGL 409
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 156/359 (43%), Gaps = 34/359 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIA-LLSSLQNLSVLDLG 59
+T + EL LS +TDAG+ HL + L L + +T T +A L S+ + D
Sbjct: 181 LTGVVELSLSD-TPLTDAGLSHLHDLKALGTLDVRKTRATPASLAELHKSVPGCRIRDSA 239
Query: 60 G-LPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP-RLSFLNLAWTGVT---- 112
G P D+ L + VL+ + + G R AA L P L+ +NL+ V
Sbjct: 240 GDRPPLDVNRLAAEWVLSVGGSVGVSGQPRDIRAAADLPQGPLALARVNLSDRSVKDDDL 299
Query: 113 -KLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--- 167
+L + L L L + D+ L +N A L +SL GT + A + SL
Sbjct: 300 GRLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGTDVTDAGLARIRERKSLTTL 359
Query: 168 -LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
LS V+N+ L L + L H+ L + + D + + + +L+ L LS TR
Sbjct: 360 HLSSTKVTNAGL---VHLAGLAGLSHIHLDGTGVSDAGLVHLKGL-TDLKTLGLSRTRV- 414
Query: 227 SAGVGILAGH-LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
G G+ H L+ L L+ T + D A +++S +L+ + T + T
Sbjct: 415 -LGPGLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHTLRHLGADGTGL----------T 463
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
D + +++L L LNL T V DA L L + HL++RN +T LH +
Sbjct: 464 D--AGMAHVRHLTGLISLNLSDTAVGDAGLMQLGSNAGPTHLTVRNTKVTLRGLHAFHA 520
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 158/388 (40%), Gaps = 27/388 (6%)
Query: 3 CLKELDLS-RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
L ++LS R VK D G L + L +L L ET +T + L +L L L L G
Sbjct: 283 ALARVNLSDRSVKDDDLG--RLAGCTGLTELVLHETRVTDAALGYLKNLARLQFLSLTGT 340
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPN 116
VTD L ++ L L L ++V+N G L LS ++L TGV+ L
Sbjct: 341 DVTDAGLARIRERKSLTTLHLSSTKVTNAGLVHLAGLAGLSHIHLDGTGVSDAGLVHLKG 400
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF-LDVS 174
++ L+ L LS + L + L + L T +E A L +L D +
Sbjct: 401 LTDLKTLGLSRTRVLGPGLAHTHSWKRLDALYLTNTGVTDEAFAHLSPHHTLRHLGADGT 460
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+ + + + L L+LS + +GD + M A +L + NT+ + G+
Sbjct: 461 GLTDAGMAHVRHLTGLISLNLSDTAVGDAGL-MQLGSNAGPTHLTVRNTKVTLRGLHAFH 519
Query: 235 GHLPNLEIL----SLSGTQIDDYAISY-MSMMPSLKFIDISNTDI-------KGFIQQVG 282
P + L T+ D A + ++ L+ + N + + F+
Sbjct: 520 ATGPWRTVTWDGGQLGPTEADRSAARWALAAGGRLRVSGVPNEIVAAGELPKRKFVVTEL 579
Query: 283 AETDLVLS---LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
A L +S L AL+ L + RL+L + +++ L L L L L +TD L
Sbjct: 580 ALNGLAVSDTELAALKYLTGMSRLDLAGSAITNDGLAHLKGLTGLRRLGLSETRVTDAGL 639
Query: 340 HQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
+ +L LT L + +T G F+
Sbjct: 640 DAIKAL-PLTELDLLGTAVTQKGAEGFR 666
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
KVTDAG+ HL +S L L L+ +G+T G+A L++ L+ L + G V+D L +
Sbjct: 73 TKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTSLWVQGTTVSDAGLAVAR 132
Query: 73 VLTKLEYLDLWGSQVSNRGAA 93
L L ++DL G++V+ G A
Sbjct: 133 ELPALTHIDLSGTKVTGPGLA 153
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 242 ILSLSGT-QI--DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+LSL+G Q+ ++ I + +P+ +F ++ D+ + A+ DL L++
Sbjct: 12 VLSLNGAVQVNGEEREIRSAADLPADRFA-LTAADL---TDRAVADADLA----RLKDCQ 63
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
L R+ L T+V+DA L L L HL+L + +TD L L++ LT+L ++ +
Sbjct: 64 ALTRIILHGTKVTDAGLAHLKGLSNLAHLNLAYSGVTDAGLADLNAFPLLTSLWVQGTTV 123
Query: 359 TNSGLGSFKPPRSLKLLDLHG 379
+++GL + +L +DL G
Sbjct: 124 SDAGLAVARELPALTHIDLSG 144
>gi|335058613|gb|AEH26502.1| leucine-rich repeat domain protein [uncultured Acidobacteria
bacterium A11]
Length = 402
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DA + L + L L L+ TG+ G+ ++ +L+NL L+L PVTD L L L
Sbjct: 143 LVDAWLDRLADLPDLISLDLANTGVAGPGLKVVGTLKNLERLNLTLTPVTDAHLEHLAGL 202
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
T L L L ++ + G L +L N +T G+ + ++ LE L + +C
Sbjct: 203 TNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTGLERLEIVHCH 262
Query: 130 IDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ AP LAK+ + +E + D + +++ LT+++
Sbjct: 263 F------TDAGAPHLAKL--------------VNLERLQIGSRDATGAAIEPLTALTKLR 302
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
LDL + + V + + +LR L + + + G +A L NLEIL +
Sbjct: 303 ---ELDLQDNQATAEGVRHASRI-PSLRVLRI-HGQIKDEGAASIA-QLSNLEILVANNA 356
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDI 274
+ D A+ + + +P L+ ++I I
Sbjct: 357 GLTDDALDHFARLPRLQRLEIKGNKI 382
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
LDL+++ + +++V + NL LNL+ T + A + LAG L NL +LSL+ +
Sbjct: 160 LDLANTGVAGPGLKVVGTL-KNLERLNLTLTPVTDAHLEHLAG-LTNLRVLSLASAKCTG 217
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
++ + L+ + T + L + + LERL + +D
Sbjct: 218 EGFRFLGKLKQLENANFHFTPVNDA------------GLAGISTVTGLERLEIVHCHFTD 265
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
A L+ L L + + T ++ L++L+KL L ++D T G+ SL
Sbjct: 266 AGAPHLAKLVNLERLQIGSRDATGAAIEPLTALTKLRELDLQDNQATAEGVRHASRIPSL 325
Query: 373 KLLDLHG 379
++L +HG
Sbjct: 326 RVLRIHG 332
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
D + ++ +P L +D++NT + G L + L +LERLNL T V+
Sbjct: 145 DAWLDRLADLPDLISLDLANTGVAGP------------GLKVVGTLKNLERLNLTLTPVT 192
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
DA L L+ L LSL +A T L L +L N + + ++GL
Sbjct: 193 DAHLEHLAGLTNLRVLSLASAKCTGEGFRFLGKLKQLENANFHFTPVNDAGLAGISTVTG 252
Query: 372 LKLLDL 377
L+ L++
Sbjct: 253 LERLEI 258
>gi|320169763|gb|EFW46662.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 684
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 43/359 (11%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
++ L L+LS +T+ + S L L+ L L G P+T + + LT L LD++ +
Sbjct: 56 LTALNSLFLSNNPITSIAVNAFSGLTALTQLSLAGNPLTTIPDNTFTGLTALTRLDVYVT 115
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
Q+++ A+ P L L+L +T NI+S L+ T S+ N P
Sbjct: 116 QIASISASAFAGLPVLEVLSLNDNQIT---NIASNTFTGLTALTRLSLFNNNITSIP--- 169
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSN---SSLSRFCFLTQMKALEHLDLSSSMIGD 202
A + + S L++LD++ +SLS F+ + L +L L+S+ I
Sbjct: 170 -------------ASAFADLSALTYLDLAGNQMTSLSANAFI-GLTELTYLSLTSNEI-- 213
Query: 203 DSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
S+ A G L L L N +S AG L +L +L + QI + + + +
Sbjct: 214 TSISPAAFTGLTALTELVLENNLIASISANDFAG-LTSLNLLRMRNNQITSLSANGFAGL 272
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDLVLSL--TALQNLNHLERLNLEQTQVSDATLFPLS 319
PSL +D+ + +L+ S+ +A L L L+++ Q++ + +
Sbjct: 273 PSLTELDL--------------DLNLMTSIDASAFAGLTSLNLLSVQNNQITSISANGFA 318
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
L L L + +T +S + + L+ L L + +T+ +F SL +L LH
Sbjct: 319 GLPSLTALGLESNQITSISANAFAGLTSLNFLRLEGNQITSISANAFAAVTSLSVLSLH 377
>gi|290998894|ref|XP_002682015.1| predicted protein [Naegleria gruberi]
gi|284095641|gb|EFC49271.1| predicted protein [Naegleria gruberi]
Length = 413
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 22/231 (9%)
Query: 145 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
+I + G +I+E + TSL +S +++S+ ++++MK L L + ++ IGD+
Sbjct: 144 RIGVEGVKYISEMKQL----TSLNISEIEISDEGAK---YISEMKQLTSLYIHNNEIGDE 196
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
+ ++ + L +LN+ S G ++ + L LS+ +I D Y+S M
Sbjct: 197 GSKHISEM-KQLTSLNIGCNEISDEGAKHIS-EMNQLISLSIGYNRIGDEGFKYISEMKQ 254
Query: 264 LKFIDISNTDI----KGFIQQVGAETDLVLSLTALQN--------LNHLERLNLEQTQVS 311
L +DI++ +I +I ++ T L + + + L L L++ +T++S
Sbjct: 255 LTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTSLDISETEIS 314
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
D +S K+LI L++ ++D +S L +LT+L I D + N G
Sbjct: 315 DEGAKYISEMKQLIWLTIGYNEISDKGAKYISELKQLTSLDITDNKIGNEG 365
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 134/319 (42%), Gaps = 63/319 (19%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G+K++ + L L +SE ++ +G +S ++ L+ L + + D + + + +L
Sbjct: 149 GVKYISEMKQLTSLNISEIEISDEGAKYISEMKQLTSLYIHNNEIGDEGSKHISEMKQLT 208
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE 138
L++ +++S+ GA + +L L++ + +
Sbjct: 209 SLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGD------------------------- 243
Query: 139 NKAPLAKISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDL 195
E F YI E L+ LD+++ + ++++MK L L++
Sbjct: 244 -------------------EGFKYISEMKQLTSLDITDDEIGDEGAKYISEMKQLTSLNI 284
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
+ IGD+ + ++ + L +L++S T S G ++ + L L++ +I D
Sbjct: 285 GFNEIGDEGAKYISEL-KQLTSLDISETEISDEGAKYIS-EMKQLIWLTIGYNEISDKGA 342
Query: 256 SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
Y+S + L +DI++ ++G E +S +N L LN+ ++ D
Sbjct: 343 KYISELKQLTSLDITDN-------KIGNEGAKYIS-----EMNQLISLNIGYNRIGDEGA 390
Query: 316 FPLSTFKELIHLSLRNASL 334
+S K+L SLR SL
Sbjct: 391 KYISEMKQLT--SLRQISL 407
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G KH+ + L L + ++ +G +S + L L +G + D + +
Sbjct: 192 EIGDEGSKHISEMKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYISE 251
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNC 128
+ +L LD+ ++ + GA + +L+ LN+ + G + + L L++S
Sbjct: 252 MKQLTSLDITDDEIGDEGAKYISEMKQLTSLNIGFNEIGDEGAKYISELKQLTSLDISE- 310
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+IS G +I+E + +++ + + ++S+ +++++K
Sbjct: 311 ---------------TEISDEGAKYISEMKQLIWL---TIGYNEISDKGAK---YISELK 349
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L LD++ + IG++ + ++ + L +LN+ R G ++
Sbjct: 350 QLTSLDITDNKIGNEGAKYISEMNQ-LISLNIGYNRIGDEGAKYIS 394
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S+ + F+++MK L LD+ S+ IG + V+ ++
Sbjct: 122 SVDQLKFISEMKQLTSLDIYSNRIGVEGVKYIS--------------------------E 155
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L L++S +I D Y+S M L + I N +I G E +S
Sbjct: 156 MKQLTSLNISEIEISDEGAKYISEMKQLTSLYIHNNEI-------GDEGSKHIS-----E 203
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L LN+ ++SD +S +LI LS+ + D +S + +LT+L I D
Sbjct: 204 MKQLTSLNIGCNEISDEGAKHISEMNQLISLSIGYNRIGDEGFKYISEMKQLTSLDITDD 263
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+ + G + L L++
Sbjct: 264 EIGDEGAKYISEMKQLTSLNI 284
>gi|218185950|gb|EEC68377.1| hypothetical protein OsI_36516 [Oryza sativa Indica Group]
Length = 959
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 157/400 (39%), Gaps = 72/400 (18%)
Query: 23 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LL+++ LE + LS+ G T L SLQNL L+L G+P + V L LT L Y
Sbjct: 144 LLNLTYLEHIDLSKNQLQGQTGRVPEFLGSLQNLRYLNLSGIPFSGEVPPQLGNLTNLHY 203
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE- 138
L L S+ G ++F ++ W L + SL L++S+ ++ + + +
Sbjct: 204 LGL-----SDTG---------INFTDIQW-----LARLHSLTHLDMSHTSLSMVHDWADV 244
Query: 139 -NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
N P K+ L++ L + D S S F + LE LDLS
Sbjct: 245 MNNIPSLKV--------------LHLAYCNLVYAD---QSFSHF----NLTNLEELDLSV 283
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
+ L+ LNL +T+ + G +L L LS T D +
Sbjct: 284 NYFNHPIASCWFWNAQGLKYLNLGSTKLYGQFPNV-PGQFGSLRFLDLSSTCNIDIVTTN 342
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
++ + +L+ I + + I G I Q +L + N L L L +S
Sbjct: 343 LTNLCNLRIIHLERSQIHGDIAQ-------LLQRLPRCSYNRLNELYLSDNNISGILPNR 395
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR----DAVLTNSGLGSFKPPRSLK 373
L L+ L + + L+ Q+ S LT L + + V+T+ F RSLK
Sbjct: 396 LDHLTSLVILDISHNKLSGPLPPQIGMFSNLTYLDLSSNNLNGVITDE---HFTSMRSLK 452
Query: 374 LLDLHGG---------WLL---TEDAILQFCKMHPRIEVW 401
LDL G WL E A+ C M PR W
Sbjct: 453 TLDLSGNSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGW 492
>gi|290979547|ref|XP_002672495.1| predicted protein [Naegleria gruberi]
gi|284086072|gb|EFC39751.1| predicted protein [Naegleria gruberi]
Length = 665
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+T VL+++ L K+ Y+D+ ++ + GA+++ +L++L++++TG++ S +
Sbjct: 398 ITHEVLQNITKLEKVNYVDIAAIRIGDEGASMIGQMKQLTYLDISFTGISYNGMRSIGQL 457
Query: 123 LNLSNCTIDSILEGNEN-KAP-----------LAKISLAGTTF--INEREAFLYIETSLL 168
NL+ S + EN AP L K++ T+ I + + E L
Sbjct: 458 TNLTQLIFSS--DDYENYSAPKGVTVAIHLRNLKKLTHLDITYNEIGDEGSQFISELLNL 515
Query: 169 SFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
++L++ N+ L F +++++ L HL++S++ +S++ + C NL +L NT +
Sbjct: 516 TYLEMPNNQLRNEGFKMISKLENLTHLNISNNDFNCESMKHL-CELKNLTSLEAFNTGIT 574
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
S V ++A HL L L LS I + Y+S + L+ + ++ T++
Sbjct: 575 SNDVKLIANHLKYLTELDLSCNDIGNEGAKYVSELKQLQSLQLAQTNL 622
>gi|407705527|ref|YP_006829112.1| ATP-grasp domain-containing protein [Bacillus thuringiensis MC28]
gi|407383212|gb|AFU13713.1| Internalin [Bacillus thuringiensis MC28]
Length = 670
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 221 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 274 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKSLYVAGNQIED--VTALAKMGQ-LDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 331 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 387
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 388 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 445
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 446 ISDLS--PISQLKKLTFLSLVANEIRDV 471
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 294
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++ L ++G QI+D
Sbjct: 295 N--VAPLT-EMKNVKSLYVAGNQIED---------------------------------- 317
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 318 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 363
Query: 347 KLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 364 PLYALPLKDLVLT 376
>gi|46447550|ref|YP_008915.1| hypothetical protein pc1916 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401191|emb|CAF24640.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 310
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL + L+ L L+ LT DG+ L+ L L LDL
Sbjct: 125 LTALQHLDLSGCWNLTDAGLVHLTPLVGLQHLKLNACYNLTDDGLVHLTPLTALQHLDLS 184
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGV 111
+ +TD L L+ LT L++L L + +++ G A L L +L NL G+
Sbjct: 185 DCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALSDCMNLTDDGL 244
Query: 112 TKLPNISSLECLNLSNC 128
L +++L+ LNL NC
Sbjct: 245 VHLKPLTALQHLNLRNC 261
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C+ +TDAG+ HL ++ L+ L LS LT G+A L+ L L L L
Sbjct: 175 LTALQHLDLSDCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHLAPLTGLQYLALS 234
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNL 106
+ +TD L L+ LT L++L+L + V++ G A L L LNL
Sbjct: 235 DCMNLTDDGLVHLKPLTALQHLNLRNCRNVTDAGLAHLTPLKALQQLNL 283
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG-L 61
LK L L C +TD G++HL ++ L+ L LS LT G+ L+ L L L L
Sbjct: 103 LKALYLEACQALTDDGLEHLTLLTALQHLDLSGCWNLTDAGLVHLTPLVGLQHLKLNACY 162
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGVTKL 114
+TD L L LT L++LDL +++ G A LK L L NL G+ L
Sbjct: 163 NLTDDGLVHLTPLTALQHLDLSDCMNLTDAGLAHLKPLTALQHLGLSCCENLTDAGLAHL 222
Query: 115 PNISSLECLNLSNC 128
++ L+ L LS+C
Sbjct: 223 APLTGLQYLALSDC 236
>gi|169823733|ref|YP_001691344.1| N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC 29328]
gi|167830538|dbj|BAG07454.1| N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC 29328]
Length = 1554
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 168 LSFLDV-SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF 225
+ LD+ +N + F FL ++ LE +D+ V++ VG + LR+LNL + +
Sbjct: 147 IRLLDIRNNDKVKDFEFLKKLNNLEQVDMHEVY----HVDLSNFVGKSKLRSLNLQSCKI 202
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
S L L L+LS +ID+ I + + +L+F+DISN + +I G E
Sbjct: 203 SDLKP---LKDLKELRYLNLSFNKIDN--IEALKDLTNLRFLDISNQNRFDYI--AGVER 255
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
++ SL L+ L L L VSD T PL+ +L ++L N + D +L+S
Sbjct: 256 PMIDSLKPLEGLAELSELAFSSHNVSDLT--PLTKLTKLKKVTLTNNKIKDSEFKKLNS 312
>gi|300693896|ref|YP_003749869.1| type III effector protein [Ralstonia solanacearum PSI07]
gi|299075933|emb|CBJ35242.1| leucine-rich-repeat type III effector protein (GALA2) [Ralstonia
solanacearum PSI07]
Length = 1002
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 170/394 (43%), Gaps = 50/394 (12%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LDLS C V+ AG+ +L LE L LS+T + G LL+S +L+ L+L G
Sbjct: 576 VRHLDLSGCTGTAVSGAGLAYLAG-RKLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGN 634
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
++D + T L L+L G+ +S+ GA L L+ L+++ TGV L +
Sbjct: 635 EISDAGAAAFADNTSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIGNTGVQALAS 694
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
SL LNL + I D +E + L + ++ F + A L +L S L ++
Sbjct: 695 SRSLTSLNLCSTWIEDEGVEALASNTVLRSLDISHNRFGAQFAAELAQNRTLAS-LKANH 753
Query: 176 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
SL+ L +++L L+LSS++I D V+ + A+LR+L+LS G+G L
Sbjct: 754 CSLTNNVAQQLASIRSLTALELSSNLIDDAGVQAI-VRNASLRSLDLSQNPI---GLGGL 809
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
+A++ + SL I D G +
Sbjct: 810 -------------------HALALSRTLTSLDVSCIGCGDRGGLV--------------- 835
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L L L ++ + L+ + LI L L ++ V+ L+ +L +L+
Sbjct: 836 LSKSRSLTLLKLGSNGIASEGVQILAANRSLISLDLSGNTIDVVAARALAKNPRLASLNA 895
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
L ++ + + RSL LD+ L + A
Sbjct: 896 SSCGLDDAAVSALAESRSLTSLDVSKNRLFSPGA 929
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 156/403 (38%), Gaps = 68/403 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDLS + D G + L S ++L L LS ++ G A + +L+ L+L G +
Sbjct: 602 LESLDLSD-TPIGDRGAQLLASSTSLTSLNLSGNEISDAGAAAFADNTSLTSLNLRGNHI 660
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
+D +L T L LD+ + + N G L L+ LNL T GV L + +
Sbjct: 661 SDAGAEALGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTWIEDEGVEALASNT 720
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L L++S+ G F E + L+ L ++ SL
Sbjct: 721 VLRSLDISHNRF-------------------GAQFAAE-----LAQNRTLASLKANHCSL 756
Query: 179 SRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA-- 234
+ L +++L L+LSS++I D V+ + A+LR+L+LS G+ LA
Sbjct: 757 TNNVAQQLASIRSLTALELSSNLIDDAGVQAI-VRNASLRSLDLSQNPIGLGGLHALALS 815
Query: 235 ----------------GHL-----PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
G L +L +L L I + ++ SL +D+S
Sbjct: 816 RTLTSLDVSCIGCGDRGGLVLSKSRSLTLLKLGSNGIASEGVQILAANRSLISLDLSGNT 875
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
I V++ AL L LN + DA + L+ + L L +
Sbjct: 876 ID------------VVAARALAKNPRLASLNASSCGLDDAAVSALAESRSLTSLDVSKNR 923
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L L+ LT+L+I + G + SL LD
Sbjct: 924 LFSPGARALAGNRVLTSLNISHNRIGFHGAAALAESTSLTFLD 966
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN---TRFSSAGVGILAGHL 237
F L ALE L S G+ ++ + + ++R+L+LS T S AG+ LAG
Sbjct: 546 FSRLGNYSALESL----SFHGNLTIADLKALPPSVRHLDLSGCTGTAVSGAGLAYLAGR- 600
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
LE L LS T I D ++ SL +++S +I GA A +
Sbjct: 601 -KLESLDLSDTPIGDRGAQLLASSTSLTSLNLSGNEIS----DAGA--------AAFADN 647
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L LNL +SDA L L L + + + + L+S LT+L++
Sbjct: 648 TSLTSLNLRGNHISDAGAEALGRNTVLTSLDVSANPIGNTGVQALASSRSLTSLNLCSTW 707
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
+ + G+ + L+ LD+
Sbjct: 708 IEDEGVEALASNTVLRSLDI 727
>gi|51850104|dbj|BAD42393.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 647
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 165/394 (41%), Gaps = 51/394 (12%)
Query: 4 LKELDLSRC----VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
L+ +DL C + A +++L ++ LE L + + G ALL+ ++L L++
Sbjct: 202 LRHIDLGECDPGCGAKSHAAIEYLATL-PLESLNVKGAAIGDRGAALLAGNRSLKTLNVA 260
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++++ R L LE LD+ G+Q+ RGA L + L L GVT P I +
Sbjct: 261 DGGISEVGARKLADHASLESLDMTGNQIDARGAQHLATSESIQTLRLCCCGVTD-PGIQA 319
Query: 120 ------LECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINE------------- 156
L+ L++S I+ L N + L +S T + E
Sbjct: 320 LARNRQLKSLDVSGNHINEDALRALAANPSLTTL-DVSCNRQTPVGEPQSVEQGVSMALA 378
Query: 157 -REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE-----HLDLSSSMIGDDSVEMVAC 210
E + ET L S N+ + F +M A L L S+ IG + + +A
Sbjct: 379 LAEGLVGRETPLASLKADGNAFVD---FAAEMLAFPTIGTASLSLKSNFIGPEGAQKLAE 435
Query: 211 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID-- 268
A L++L+L+ + AG L+ H +L+ LS+ + D ++ P L +D
Sbjct: 436 NPA-LKSLDLTRNKIGDAGAEALS-HSRSLKTLSVLNCDVKDPGAQALARNPMLITLDLG 493
Query: 269 --ISNTDIKGFIQQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLST 320
IS QQ E D + AL L L+++ DA + PL+
Sbjct: 494 NLISEKQNPAARQQEQDEFDATANEITENGTRALAQSPSLTSLSVQGNLCEDAGVLPLAR 553
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L L++ ++T S +L+S LT+L++R
Sbjct: 554 SPRLTSLNVAYTNMTLESARELASNPVLTSLNVR 587
>gi|430746594|ref|YP_007205723.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
gi|430018314|gb|AGA30028.1| hypothetical protein Sinac_5912 [Singulisphaera acidiphila DSM
18658]
Length = 170
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 16/148 (10%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L+ L + NTR AG+ LA H P + L L GT+I D + + M SL + + T I
Sbjct: 23 LKRLAIENTRVGDAGMAQLASH-PGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGI 81
Query: 275 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
TD L L ++ LERL+L T++SDA + L K L + ++
Sbjct: 82 ----------TDA--GLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKG---LDIVETNV 126
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
TD S+ + +L ++ R + +T +G
Sbjct: 127 TDRSIPIIGGFERLEAINPRGSKITEAG 154
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+ ELDL K+TDAG+K L + +L L L TG+T G+A L+ + L LDLG +
Sbjct: 47 IAELDL-HGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKI 105
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
+D ++ L L+ LD+ + V++R ++ F RL +N + +T+
Sbjct: 106 SDA---GIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITE 152
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
+ L+L T+++DA L PL K L+HLSLR +TD L L+ + +L L + ++
Sbjct: 47 IAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAGMDRLERLDLGYTKIS 106
Query: 360 NSGLGSFKPPRSLKLLDLH---------GGW-----------LLTEDAILQFCKMHPRIE 399
++G+ K + L +++ + GG+ +TE Q KM P+++
Sbjct: 107 DAGIEHLKGLKGLDIVETNVTDRSIPIIGGFERLEAINPRGSKITEAGEEQLRKMLPKLD 166
Query: 400 VWH 402
+ H
Sbjct: 167 IDH 169
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L+RL +E T+V DA + L++ + L L +TD L L + L +LS+R +T
Sbjct: 23 LKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGIT 82
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++GL L+ LDL G+ DA ++ K
Sbjct: 83 DAGLAHLAGMDRLERLDL--GYTKISDAGIEHLK 114
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+V DAGM L S + +L L T +T G+ L +++L L L +TD L L
Sbjct: 32 RVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLRATGITDAGLAHLAG 91
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTID 131
+ +LE LDL +++S+ G LK L L++ T VT +P I E L N
Sbjct: 92 MDRLERLDLGYTKISDAGIEHLKG---LKGLDIVETNVTDRSIPIIGGFERLEAINPRGS 148
Query: 132 SILEGNENK 140
I E E +
Sbjct: 149 KITEAGEEQ 157
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 24 LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 83
LS L++L + T + G+A L+S ++ LDL G +TD L+ L+ + L +L L
Sbjct: 18 LSAVVLKRLAIENTRVGDAGMAQLASHPGIAELDLHGTKITDAGLKPLKGMKSLVHLSLR 77
Query: 84 GSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI 133
+ +++ G A L RL L+L +T G+ L + L+ + +N T SI
Sbjct: 78 ATGITDAGLAHLAGMDRLERLDLGYTKISDAGIEHLKGLKGLDIVE-TNVTDRSI 131
>gi|46447552|ref|YP_008917.1| hypothetical protein pc1918 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401193|emb|CAF24642.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 552
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 33/207 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG----IALLSSLQNLSVL 56
+T L+ L+L+ C K+TDAG+ HL S++ L+ L LS D + L++LQNL++
Sbjct: 242 LTALQHLNLNGCYKLTDAGLVHLKSLTALQTLDLSYCKNLKDAGLVHLKPLTALQNLALT 301
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAWT------ 109
L TD L L+ LT L+ LDL + + G A L L L+L++
Sbjct: 302 SCKNL--TDRGLSHLKSLTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDR 359
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G++ L ++++L+ LNLS C K+ AG + A Y+ +L S
Sbjct: 360 GLSHLKSLTALQTLNLSYC---------------KKLKDAGLAHLKPLTALQYL--ALNS 402
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLS 196
++++ LS L + AL+HL LS
Sbjct: 403 CKNLTDRGLSH---LKSLMALQHLVLS 426
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C DAG+ HL ++ L+ L LS LT G++ L SL L L+L
Sbjct: 317 LTALQTLDLSYCKNFKDAGLAHLPPLTALQTLDLSYCKDLTDRGLSHLKSLTALQTLNLS 376
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGV 111
+ D L L+ LT L+YL L + +++RG + LK L L NL G+
Sbjct: 377 YCKKLKDAGLAHLKPLTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGCDNLTDAGL 436
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE----AFLYIETSL 167
L +++L+ L L C + +G + APL + ++ + + A L T+L
Sbjct: 437 AHLKPLTALQTLGLRRCQ-NLTGDGLAHLAPLTALQTLDLSYCKKLKDAGLAHLKPLTAL 495
Query: 168 --LSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
L SN + + L + AL+HLDLS
Sbjct: 496 QTLGLKWCSNLTDAGLAHLKPLAALQHLDLS 526
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL- 61
L+ L LS C +TDAG+ HL ++ L+ L L LT DG+A L+ L L LDL
Sbjct: 420 LQHLVLSGCDNLTDAGLAHLKPLTALQTLGLRRCQNLTGDGLAHLAPLTALQTLDLSYCK 479
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW 108
+ D L L+ LT L+ L L W S +++ G A LK L L+L++
Sbjct: 480 KLKDAGLAHLKPLTALQTLGLKWCSNLTDAGLAHLKPLAALQHLDLSY 527
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 171/394 (43%), Gaps = 83/394 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWL----SETGLTADGIALLSSLQNLSVLDLG 59
++ L+ S +TDA HLL++ E L + + +T DG+A L+ L L L+L
Sbjct: 195 IEALNFSNNAHLTDA---HLLTLKNCENLKVLHLEACQAITDDGLAHLAPLTALQHLNLN 251
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLAWT-------- 109
G +TD L L+ LT L+ LDL S N + A ++ + P + NLA T
Sbjct: 252 GCYKLTDAGLVHLKSLTALQTLDL--SYCKNLKDAGLVHLKPLTALQNLALTSCKNLTDR 309
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G++ L ++++L+ L+LS C N A LA
Sbjct: 310 GLSHLKSLTALQTLDLSYCK-------NFKDAGLAH------------------------ 338
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTR-FSS 227
L + AL+ LDLS + D + + + A L+ LNLS +
Sbjct: 339 --------------LPPLTALQTLDLSYCKDLTDRGLSHLKSLTA-LQTLNLSYCKKLKD 383
Query: 228 AGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
AG+ L L L+ L+L+ + + D +S++ + +L+ + +S D A
Sbjct: 384 AGLAHLKP-LTALQYLALNSCKNLTDRGLSHLKSLMALQHLVLSGCD-----NLTDAGLA 437
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSD--ATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
+ LTALQ L L R Q D A L PL+ + L LS L D L L
Sbjct: 438 HLKPLTALQTLG-LRRC---QNLTGDGLAHLAPLTALQTL-DLSYCK-KLKDAGLAHLKP 491
Query: 345 LSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDL 377
L+ L L ++ + LT++GL KP +L+ LDL
Sbjct: 492 LTALQTLGLKWCSNLTDAGLAHLKPLAALQHLDL 525
>gi|296120888|ref|YP_003628666.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
gi|296013228|gb|ADG66467.1| hypothetical protein Plim_0620 [Planctomyces limnophilus DSM 3776]
Length = 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R K+TDAG+ H+ ++ L KL L +T +T G+A LS L+ L L+L G VT ++
Sbjct: 108 RGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLAHLSGLEKLEYLNLYGTKVTGAGVKG 167
Query: 71 LQVLTKLEYLDLWGSQVSN 89
L L KL+ L LW ++VS+
Sbjct: 168 LAKLPKLQRLYLWQTEVSD 186
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L L + LNL T+++DA L + T K L+ L L ++TD L LS L KL
Sbjct: 93 LALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLAHLSGLEKLEY 152
Query: 351 LSIRDAVLTNSGL-GSFKPPR 370
L++ +T +G+ G K P+
Sbjct: 153 LNLYGTKVTGAGVKGLAKLPK 173
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
+ +LS+ + + +L G LP + IL+L GT+I D + ++ + +L + + T I
Sbjct: 80 SFHLSDQPVTDEQLALLPG-LPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAI-- 136
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
TD L L L LE LNL T+V+ A + L+ +L L L ++D
Sbjct: 137 --------TD--AGLAHLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTEVSD 186
Query: 337 VSLHQL 342
L +L
Sbjct: 187 ADLQEL 192
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 95 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
L + R+ FL L T + P IS + T+ + +K +A++ G +
Sbjct: 10 LAVVARMGFLGLLTTFIWSNPFIS-IGAEGTPATTVKPVTYTEAHKQVIAQVKSKGGQVL 68
Query: 155 NEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 213
+ ++ S LS V++ L+ L ++ L +L + I D + V +
Sbjct: 69 ALAQTDARLDVSFHLSDQPVTDEQLALLPGLPEVAIL---NLRGTKITDAGLVHVGTL-K 124
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL L+L T + AG+ L+G L LE L+L GT++ + ++ +P L+ + + T+
Sbjct: 125 NLLKLHLEKTAITDAGLAHLSG-LEKLEYLNLYGTKVTGAGVKGLAKLPKLQRLYLWQTE 183
Query: 274 I 274
+
Sbjct: 184 V 184
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
LS+ +T + +ALL L +++L+L G +TD L + L L L L + +++ G A
Sbjct: 83 LSDQPVTDEQLALLPGLPEVAILNLRGTKITDAGLVHVGTLKNLLKLHLEKTAITDAGLA 142
Query: 94 VLKMFPRLSFLNLAWTGVT--------KLPNISSL 120
L +L +LNL T VT KLP + L
Sbjct: 143 HLSGLEKLEYLNLYGTKVTGAGVKGLAKLPKLQRL 177
>gi|157873267|ref|XP_001685146.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
gi|68128217|emb|CAJ08348.1| hypothetical protein LMJF_31_1600 [Leishmania major strain
Friedlin]
Length = 811
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 69/375 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + LS C V DA + HL + +E+L LS T +T + L++ + L ++ L V
Sbjct: 308 LRSVHLSGC-NVKDADVPHLAQLPCVEELLLSRTRIT--NVQALAAGKGLRIIQLSNAQV 364
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ LQ L L LDL + VS+ L L +LNLA T VT
Sbjct: 365 DSDGIDGLQTLPYLTRLDLSSTLVSD--VNCLGQSQSLIYLNLAKTHVT----------- 411
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+E A L+++ L +E L ++N+++ F
Sbjct: 412 -------------SEGIAGLSRL--------------LTLE-----HLMLNNNNIRDVSF 439
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + +L+ L L S+++ +E + + L++L+L++TR ++ H NL L
Sbjct: 440 LAESHSLKTLSLQSTLVDSAGLEGLGRL-RTLQDLSLAHTRVTNV---TKLQHCRNLWRL 495
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L G+ +D I + +P L+ + +S TD+ A +L+L +L E+L
Sbjct: 496 DLQGSFVDQAGIVGLERLPKLRVLVLSKTDV--------ASLELILKSESL------EQL 541
Query: 304 NLEQTQVSD-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
++ + V++ + F ++ L ++L + ++D+ + L +L L++ + +T+ G
Sbjct: 542 EVKFSHVNERSAFFGVTKASALTDVTLTHCDVSDI--NNLGMCKELRLLNVWSSKVTSEG 599
Query: 363 LGSFKPPRSLKLLDL 377
+ RSL+ +DL
Sbjct: 600 IAGLCDARSLQEVDL 614
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 149/353 (42%), Gaps = 49/353 (13%)
Query: 28 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 87
+L+ L L T + + G+ L L+ L L L VT++ LQ L LDL GS V
Sbjct: 445 SLKTLSLQSTLVDSAGLEGLGRLRTLQDLSLAHTRVTNVT--KLQHCRNLWRLDLQGSFV 502
Query: 88 SNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNL--SNCTIDSILEGNENKAP 142
G L+ P+L L L+ T V L I SLE L + S+ S G +
Sbjct: 503 DQAGIVGLERLPKLRVLVLSKTDVASLELILKSESLEQLEVKFSHVNERSAFFGVTKASA 562
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFL--DVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
L ++L + + E LL+ V++ ++ C ++L+ +DL+ + +
Sbjct: 563 LTDVTLTHCDVSDINNLGMCKELRLLNVWSSKVTSEGIAGLC---DARSLQEVDLAETAV 619
Query: 201 GD-----------------DSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLE 241
D SV + +GA LR L+++ T SS + L+ LE
Sbjct: 620 TDISPLLSCTKIQALILYRSSVRSLDGIGALQQLRRLDIAETSVSS--IRSLSA-CQRLE 676
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
IL+LS T +DD + SLK + +S T I QVG L +HLE
Sbjct: 677 ILNLSNTAVDDDGFQGIGQAQSLKVVSMSFTAIT----QVG----------QLGQCSHLE 722
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ + V+ L L L+ L+L L + +L++ KL L+++
Sbjct: 723 ELHAQSCPVTSEGLVGLERACCLVKLNLSYTKLQS-GIQRLTNCRKLLKLNVK 774
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 33/225 (14%)
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA---CVGANLRNLNLSNTRFSSA 228
D + ++R CFL + LS + D V +A CV L LS TR ++
Sbjct: 296 DFDCAGIARCCFL------RSVHLSGCNVKDADVPHLAQLPCV----EELLLSRTRITNV 345
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
+ AG L I+ LS Q+D I + +P L +D+S+T LV
Sbjct: 346 Q-ALAAGK--GLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSST--------------LV 388
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ L L LNL +T V+ + LS L HL L N ++ DVS L+ L
Sbjct: 389 SDVNCLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSF--LAESHSL 446
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
LS++ ++ ++GL R+L+ L L +T LQ C+
Sbjct: 447 KTLSLQSTLVDSAGLEGLGRLRTLQDLSL-AHTRVTNVTKLQHCR 490
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 48/252 (19%)
Query: 145 KISLAGTTF-INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
K+S+ T +NE +FLY T+ L ++++ +L R +E L L S +
Sbjct: 192 KLSIKSATLPLNELLSFLYSSTATLRVVEIAGMALPRLQMFALASRIEELVLDSVTVHPH 251
Query: 204 SVEMVACVG----------------------ANLRNLNLSNTR--FSSAGVGILAGHLPN 239
SV + LR L+++N + F AG+
Sbjct: 252 SVVAIGNAERQGNGQPPPPSNWVPLSDLASLQKLRRLDMTNCKGDFDCAGI----ARCCF 307
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI---------KG--FIQQVGAETDLV 288
L + LSG + D + +++ +P ++ + +S T I KG IQ A+ D
Sbjct: 308 LRSVHLSGCNVKDADVPHLAQLPCVEELLLSRTRITNVQALAAGKGLRIIQLSNAQVD-S 366
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ LQ L +L RL+L T VSD L + LI+L+L +T + LS L L
Sbjct: 367 DGIDGLQTLPYLTRLDLSSTLVSDVNC--LGQSQSLIYLNLAKTHVTSEGIAGLSRLLTL 424
Query: 349 TNL-----SIRD 355
+L +IRD
Sbjct: 425 EHLMLNNNNIRD 436
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 43/395 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ C++EL LSR ++T+ ++ L + L + LS + +DGI L +L L+ LDL
Sbjct: 329 LPCVEELLLSR-TRITN--VQALAAGKGLRIIQLSNAQVDSDGIDGLQTLPYLTRLDLSS 385
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL---NLAWTGVTKLPNI 117
V+D + L L YL+L + V++ G A L L L N V+ L
Sbjct: 386 TLVSD--VNCLGQSQSLIYLNLAKTHVTSEGIAGLSRLLTLEHLMLNNNNIRDVSFLAES 443
Query: 118 SSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFIN--------------------E 156
SL+ L+L + +DS LEG L +SLA T N +
Sbjct: 444 HSLKTLSLQSTLVDSAGLEGLGRLRTLQDLSLAHTRVTNVTKLQHCRNLWRLDLQGSFVD 503
Query: 157 REAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
+ + +E L L +S + ++ + + ++LE L++ S + + S + L
Sbjct: 504 QAGIVGLERLPKLRVLVLSKTDVASLELILKSESLEQLEVKFSHVNERSAFFGVTKASAL 563
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
++ L++ S G L +L++ +++ I+ + SL+ +D++ T +
Sbjct: 564 TDVTLTHCDVSDINN---LGMCKELRLLNVWSSKVTSEGIAGLCDARSLQEVDLAETAVT 620
Query: 276 GF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
IQ + V SL + L L RL++ +T VS ++ LS + L L
Sbjct: 621 DISPLLSCTKIQALILYRSSVRSLDGIGALQQLRRLDIAETSVS--SIRSLSACQRLEIL 678
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+L N ++ D + L +S+ +T G
Sbjct: 679 NLSNTAVDDDGFQGIGQAQSLKVVSMSFTAITQVG 713
>gi|72385461|ref|XP_846398.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|25956236|emb|CAB95328.2| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1448
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 162/387 (41%), Gaps = 88/387 (22%)
Query: 18 AGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QV 73
+ ++ L +I TLEKL L TG+ A GI L +L L +LDL G + LRSL Q
Sbjct: 529 SNVEALANILTLEKLSLHGCTGIDA-GIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQT 587
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC-TIDS 132
+ L W KM T V+ + ++ +L LNLSNC I++
Sbjct: 588 VVSLNLSHCW------------KM-----------TNVSHISSLEALNELNLSNCFGINA 624
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-------FLT 185
E E L +++ T I +R+ + L LD+S FC L+
Sbjct: 625 GWEALEKLQQL-HVAILSNTHITDRDISHFSNCKNLITLDLS------FCNKLLDVTALS 677
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+ LE L+L S +N+R G+ +L G LP L +L++
Sbjct: 678 NITTLEELNLDSC--------------SNIR-----------KGLSVL-GELPRLCVLNI 711
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL--------------SL 291
G Q++D I +S+ F+ +S + KGF V ++LV +
Sbjct: 712 KGVQLEDSVI--VSLGNGNSFVRLSLENCKGF-GDVAPLSNLVTLEELNLHYCDKVTSGM 768
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKE-LIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L L L+L +TQV D +L + T L+ L+L N S+ ++SL+ L
Sbjct: 769 GTLGRLPQLRVLDLGRTQVDDNSLENICTCSSPLVSLNLSNCKKI-TSISAIASLTALEE 827
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L+I + SG F L++ L
Sbjct: 828 LNIDNCCNVTSGWNVFGTLHQLRVATL 854
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 192/446 (43%), Gaps = 89/446 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S+C +TDA + ++ LE+L LS +T GI L L L +LDL G+PV
Sbjct: 305 LSKLCISKCNNITDA--TPISQLAALEELNLSNCHITK-GIGTLGMLLRLRMLDLSGVPV 361
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 362 EDNCLKDLCDCGSLERLNISYRIQLTDINPLSNATAIEELNLNGCRRITRGIGVVWALPK 421
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L L++ ++LS ++DS+ G PL K+SL +
Sbjct: 422 LRVLHMKD--------------VHLSEPSLDSVGTG----GPLVKVSLDNCAGFGDMTLL 463
Query: 161 LYIET----------------------SLLSFLDVSNSSLSRFCF--LTQMKALEHLDLS 196
I T L L++ + +S F + K+L L++
Sbjct: 464 SSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLNM- 522
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
S+ G +VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++
Sbjct: 523 ESITGLSNVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLR 580
Query: 257 YMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLN 304
+ + ++ +++S+ T++ I + A +L LS AL+ L L
Sbjct: 581 SLCLSQTVVSLNLSHCWKMTNV-SHISSLEALNELNLSNCFGINAGWEALEKLQQLHVAI 639
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L T ++D + S K LI L L + L DV+ LS+++ L L++ GL
Sbjct: 640 LSNTHITDRDISHFSNCKNLITLDLSFCNKLLDVT--ALSNITTLEELNLDSCSNIRKGL 697
Query: 364 GSFKPPRSLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 698 SVLGELPRLCVLNIKGVQL--EDSVI 721
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 154/376 (40%), Gaps = 71/376 (18%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
+HL +I TLE+L +++T + I +S L NL L+L + D + + KL L
Sbjct: 250 RHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCLELNSTNIDDSCVEEISACAKLSKL 308
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 140
+ S+ +N T T + +++LE LNLSNC I
Sbjct: 309 CI--SKCNN------------------ITDATPISQLAALEELNLSNCHI---------- 338
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
T I L + LS + V ++ L C +LE L++S +
Sbjct: 339 ----------TKGIGTLGMLLRLRMLDLSGVPVEDNCLKDLC---DCGSLERLNISYRIQ 385
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
D + + LNL+ R + G+G++ LP L +L + + + ++ +
Sbjct: 386 LTDINPLSNATA--IEELNLNGCRRITRGIGVVWA-LPKLRVLHMKDVHLSEPSLDSVGT 442
Query: 261 MPSLKFIDISNTDIKGF----------------IQQVGAETDLVLSLTALQNLNHLERLN 304
L + +S + GF IQ+ D++ + L L +L LN
Sbjct: 443 GGPL--VKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---DIISGVGCLGTLPYLRVLN 497
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGL 363
+++ +S + K L+ L++ S+T +S + L+++ L LS+ ++G+
Sbjct: 498 IKEAHISSLDFTGIGASKSLLQLNME--SITGLSNVEALANILTLEKLSLHGCTGIDAGI 555
Query: 364 GSFKPPRSLKLLDLHG 379
G LK+LDL G
Sbjct: 556 GCLGNLPQLKMLDLSG 571
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 179/442 (40%), Gaps = 77/442 (17%)
Query: 1 MTCLKELDLSRCVKVTDA----GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 56
+T L+EL++ C VT G H L ++TL S T + + +S ++L+ L
Sbjct: 822 LTALEELNIDNCCNVTSGWNVFGTLHQLRVATL-----SNTRTNDENVRHVSECKSLNTL 876
Query: 57 DLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--AWTG--- 110
+L +TD+ +L +T LE L+L +G L P+ L++ + G
Sbjct: 877 NLAFCKDITDVT--ALSKITMLEELNLDCCHNIRKGIETLGTLPKARILSMKECYMGDGY 934
Query: 111 ---VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL---AGTTFINEREAFLYIE 164
+ L N SL LNL ++ N A L ++ L I +
Sbjct: 935 AQQCSILGNSKSLVKLNLERSRGRISVKALSNVATLEELVLDHARKVCCIPSFSCLPRLR 994
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
L + D+ N +++ +++ K+L L+LS D + + + N+N N
Sbjct: 995 VLNLKYTDI-NGDVTKN--ISESKSLRSLNLSHCKWVTDISVLSSLLTLEELNVNCCN-- 1049
Query: 225 FSSAGVGILAG-----HLPNLEILSLSGTQI---DDYAISYMSMMPSLKFID---ISNTD 273
GI G LP L + LS T+I D +S + LKF +S+
Sbjct: 1050 ------GIRKGWESLGKLPLLRVAILSDTKITAKDIACLSSCKKLVKLKFFQCEKLSDVT 1103
Query: 274 IKGFIQQ-----VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
+ IQ V + +D + L AL L L +L + SD ++ + T K L+ L
Sbjct: 1104 VVYKIQSLEELIVTSCSDGLKGLNALGTLPRLRFHHLRNVRGSDISVESIGTSKSLVRLH 1163
Query: 329 LR-NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF-KPPR---------------- 370
+ LTD++ LS+++ L LS+RD G+G+ K PR
Sbjct: 1164 IEVGEELTDIT--PLSNITSLEELSLRDYRKPPEGVGTLGKLPRLKSLDLGLSRISDSTL 1221
Query: 371 -------SLKLLDLHGGWLLTE 385
S+ L+L W LT+
Sbjct: 1222 YCICLSRSITSLNLDSSWKLTD 1243
>gi|406833864|ref|ZP_11093458.1| hypothetical protein SpalD1_19557 [Schlesneria paludicola DSM
18645]
Length = 310
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 85/131 (64%), Gaps = 6/131 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+ L LS K+TDAG++HLL + L +L L++T ++ +G+ +SSL +LS+LDL G
Sbjct: 156 MDRLESLALS-STKITDAGLRHLLRLKKLSRLQLAQTAVSDEGLKTISSLHSLSLLDLYG 214
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLP 115
+TD L+SL++L KLEYLDL G+ +SN G A L + P L + + T G+ +L
Sbjct: 215 TRITDQGLKSLELLRKLEYLDLGGTAISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLT 274
Query: 116 NISSLECLNLS 126
+ISSL L L+
Sbjct: 275 SISSLRYLYLN 285
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VTD G+K L S+ LE L LS T +T G+ L L+ LS L L V+D L+++
Sbjct: 144 QVTDDGLKELESMDRLESLALSSTKITDAGLRHLLRLKKLSRLQLAQTAVSDEGLKTISS 203
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L L LDL+G++++++G L++ +L +L+L T ++
Sbjct: 204 LHSLSLLDLYGTRITDQGLKSLELLRKLEYLDLGGTAIS 242
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++TD G+K L + LE L L T ++ G+A L L NL + + G + D L L
Sbjct: 216 RITDQGLKSLELLRKLEYLDLGGTAISNAGLAHLGVLPNLVTVGVRGTQIGDSGLEQLTS 275
Query: 74 LTKLEYLDLWGSQVSNRGAA 93
++ L YL L +Q + G A
Sbjct: 276 ISSLRYLYLNMAQTTKEGRA 295
>gi|220932817|ref|YP_002509725.1| hypothetical protein Hore_19830 [Halothermothrix orenii H 168]
gi|219994127|gb|ACL70730.1| leucine-rich repeat protein [Halothermothrix orenii H 168]
Length = 531
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 163/345 (47%), Gaps = 42/345 (12%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L + LE L LS ++ + L+ L NL L++ ++DL + L LT L +LDL
Sbjct: 166 LAGLVKLEYLKLSHQKIS--NLETLTQLPNLKTLNVAYNSISDL--KPLTALTGLSHLDL 221
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 142
+ + + + L+ +L++LNL +T + ++SSLE L + +L GN+ +
Sbjct: 222 EANNI--KDISPLRGLKKLTYLNLIRNELTGVKHLSSLEGLQV------LLLSGNDLRNI 273
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSF-----LDVSNSSLSRFCFLTQMKALEHLDLSS 197
+ L ++ + + + L F L++S + + F+++ + LE L +
Sbjct: 274 ASLTRLVNLEKLDISDNNISVAPGLKEFKGLKELNISGNPIDDINFISECRKLERLLAFN 333
Query: 198 SMIGDDSVEMVACVGAN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
I D S G N L+ L L N R + + L G L LE L LSG I++ +S
Sbjct: 334 CEIRDIS----PLRGHNSLKELFLHNNRITD--ISPLEG-LNTLERLDLSGNSIEN--VS 384
Query: 257 YMSMMPSLKFIDISNTDIKG--FIQQVGA------ETDLVLSLTALQNLNHLERLNLEQT 308
+S + LK++D+ + F++ +G+ E + + + L+ +L+ L L+
Sbjct: 385 VISGLNKLKYLDLEGCGLTAIEFLKDLGSLEYLELENNRISQIEPLKKHINLKTLVLDNN 444
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
Q+ D +ST EL++L + SL D + + SL+ L L +
Sbjct: 445 QIKD-----ISTLGELMNLKV--LSLNDNQIENIDSLTGLNQLEV 482
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 21/280 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ LK+L ++ G+KHL S+ L+ L LS L IA L+ L NL LD+
Sbjct: 232 LRGLKKLTYLNLIRNELTGVKHLSSLEGLQVLLLSGNDLR--NIASLTRLVNLEKLDISD 289
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++ V L+ L+ L++ G+ + + + + RL N ++ L +S
Sbjct: 290 NNIS--VAPGLKEFKGLKELNISGNPIDDINFISECRKLERLLAFNCEIRDISPLRGHNS 347
Query: 120 LECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
L+ L L N I I LEG L ++ L+G + N + + L +LD+
Sbjct: 348 LKELFLHNNRITDISPLEG---LNTLERLDLSGNSIEN---VSVISGLNKLKYLDLEGCG 401
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
L+ FL + +LE+L+L ++ I +E + NL+ L L N + G L
Sbjct: 402 LTAIEFLKDLGSLEYLELENNRIS--QIEPLKK-HINLKTLVLDNNQIKDIST---LGEL 455
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
NL++LSL+ QI++ I ++ + L+ + IS I+
Sbjct: 456 MNLKVLSLNDNQIEN--IDSLTGLNQLEVLYISGNRIRNI 493
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 30/224 (13%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFS 226
L L+V+ +S+S LT + L HLDL ++ I D S G L LNL R
Sbjct: 194 LKTLNVAYNSISDLKPLTALTGLSHLDLEANNIKDIS----PLRGLKKLTYLNL--IRNE 247
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS--NTDIKGFIQQVGAE 284
GV L+ L L++L LSG + + I+ ++ + +L+ +DIS N + +++
Sbjct: 248 LTGVKHLSS-LEGLQVLLLSGNDLRN--IASLTRLVNLEKLDISDNNISVAPGLKEFKGL 304
Query: 285 TDLVLSLTALQNLN------HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
+L +S + ++N LERL ++ D + PL L L L N +TD+S
Sbjct: 305 KELNISGNPIDDINFISECRKLERLLAFNCEIRDIS--PLRGHNSLKELFLHNNRITDIS 362
Query: 339 -LHQLSSLSK--LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L L++L + L+ SI + + SGL LK LDL G
Sbjct: 363 PLEGLNTLERLDLSGNSIENVSVI-SGLN------KLKYLDLEG 399
>gi|342184564|emb|CCC94046.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 852
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 183 FLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
F+T +K L LDL + + D D +V C L+ L L++ R S I G L L
Sbjct: 346 FITSLKNLVELDLRENWVTDEDCASLVHC--KKLQVLRLTSCRHVSDVRWI--GSLSMLH 401
Query: 242 ILSLSGTQI-----------------------DDYAISYMSMMPSLKFIDISNTDIKGF- 277
L LS T D IS++ + LK +D+S TD+ G
Sbjct: 402 TLDLSHTHARNCWFEALSQCRRMTELSLAFSKDVVDISFIGELRMLKHLDLSGTDVGGGN 461
Query: 278 IQQVGA----------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
++ +G E LV L L+ L LE LN+E T V D+++ ++ ++L L
Sbjct: 462 LRVIGRCTMLVFLSLRECRLVTDLRFLETLQELESLNVEGTAVVDSSVCSIALCRKLKFL 521
Query: 328 SLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
SLR L DV L L L L + +T G+ + + SL+ +D G ++
Sbjct: 522 SLRYCHQLKDVRC--LQELKMLETLDLAGTYVTEEGVSTLRQCISLRHVDFTGCSFISHL 579
Query: 387 AIL 389
A L
Sbjct: 580 AFL 582
>gi|374850803|dbj|BAL53782.1| hypothetical conserved protein, partial [uncultured planctomycete]
Length = 351
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 45/276 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L+EL L+ V D +++L ++ +LE L L+ T + G+ + ++NL VL L
Sbjct: 111 LRALRELYLADS-NVDDEDLQYLANLGSLETLDLAWTPMKGTGLKHVGQIRNLRVLLLTH 169
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ D + + LTKLE LDL G+ V+++G + F V++L N+ L
Sbjct: 170 TKIADEHIAQIVPLTKLEKLDLGGTLVTDKG---------MEF-------VSRLANLKDL 213
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
C + T D+ LA++ + + T LS V++ +
Sbjct: 214 RCPE--SLTDDAT-------KLLARL--------------VQLRTLCLSSSCVTSQGVES 250
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L+++++L DLS + I D +++ + + + L +L LS T + A V + G NL
Sbjct: 251 LKTLSELRSL---DLSRTKIDDRALDQITVL-SKLEHLLLSETNITDA-VAPVIGRFMNL 305
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
+ L L GT+I D + + + +L+ +++S T + G
Sbjct: 306 KSLFLDGTKISDSVLQEVGKVHTLERLNLSKTAVTG 341
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 11 RCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 69
RC + +TD K L + L L LS + +T+ G+ L +L L LDL + D L
Sbjct: 214 RCPESLTDDATKLLARLVQLRTLCLSSSCVTSQGVESLKTLSELRSLDLSRTKIDDRALD 273
Query: 70 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLN 124
+ VL+KLE+L L + +++ A V+ F L L L T ++ ++ + +LE LN
Sbjct: 274 QITVLSKLEHLLLSETNITDAVAPVIGRFMNLKSLFLDGTKISDSVLQEVGKVHTLERLN 333
Query: 125 LSNCTIDSILEGNENKAPLA 144
LS + EG ++ PLA
Sbjct: 334 LSKTAVTG--EGLQHLTPLA 351
>gi|410952130|ref|XP_003982739.1| PREDICTED: F-box/LRR-repeat protein 13 [Felis catus]
Length = 736
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 141/313 (45%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C +TD M+++ + L LS T +T + LL +LQNLS+
Sbjct: 249 LQELNVSDCPTLTDESMRYISEGCPGVLYLNLSNTIITNRTMRLLPRHFHNLQNLSLAYC 308
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD LR L + KL YLDL G +Q+S +G
Sbjct: 309 KKF--TDKGLRYLNLGDGCHKLIYLDLSGCTQISVQGFRNIANSCTGIMHLTINDMPTLT 366
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ PR++ ++ + G P+IS LS C + I EGN+ +I
Sbjct: 367 DNCIKALVERCPRIT--SIVFIGA---PHISDCAFKALSTCNLRKIRFEGNK------RI 415
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD V
Sbjct: 416 TDACFKFIDKN----YPNISHIYMADCKRLTDSSLKSLSPLKQLTVLNLANCIRIGDMGV 471
Query: 206 EMV--ACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ V +R LNLSN A + L+ PNL LSL + + D AI Y+ +
Sbjct: 472 KQFLDGPVSIRIRELNLSNCIHLGDASIMKLSECCPNLNYLSLRNCEHLTDLAIEYVVNI 531
Query: 262 PSLKFIDISNTDI 274
SL +D+S T+I
Sbjct: 532 FSLVSVDLSGTNI 544
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 213 ANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 270
NLR + N R + A + + PN+ + ++ + + D ++ +S + L ++++
Sbjct: 402 CNLRKIRFEGNKRITDACFKFIDKNYPNISHIYMADCKRLTDSSLKSLSPLKQLTVLNLA 461
Query: 271 NT----DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELI 325
N D+ G Q + + + L N HL DA++ LS L
Sbjct: 462 NCIRIGDM-GVKQFLDGPVSIRIRELNLSNCIHL----------GDASIMKLSECCPNLN 510
Query: 326 HLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 384
+LSLRN LTD+++ + ++ L ++ + ++N GL + + LK L L + +T
Sbjct: 511 YLSLRNCEHLTDLAIEYVVNIFSLVSVDLSGTNISNEGLMTLSRHKKLKELSLSECYKIT 570
Query: 385 EDAILQFCK 393
+ I FCK
Sbjct: 571 DVGIQAFCK 579
>gi|350425720|ref|XP_003494211.1| PREDICTED: hypothetical protein LOC100742728 [Bombus impatiens]
Length = 971
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 47/421 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M+ L DLS +TD + +++ L +L L ++ L L LDL
Sbjct: 239 MSELTRFDLSDN-SLTDVSVGAFRTLAGLVRLSLRRNAISTVHEDAFQGLDRLEYLDLSD 297
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LP 115
+ DL +L L L+ LDL G+Q+ GA + RL L+++ G+ + L
Sbjct: 298 NRLADLPDSALTPLYSLQKLDLSGNQLQVLGARWFESLDRLRELDVSRNGLARAASGTLQ 357
Query: 116 NISSLECLNLSNCTID----SILEG--------NENKAPLAKI-----------SLAGTT 152
+ L L LS + S+L G + ++ LA++ LAG
Sbjct: 358 PLPGLSILKLSENPLKERDVSLLLGTGRRLETVDASRTGLARVPAALTRSVRALRLAGNK 417
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
R L LL LD+S + L L +++ LE LD+S +++ V++ A
Sbjct: 418 LTTIRGGDLD-SYPLLRILDISENRLIDIENDALGRLEVLEELDISGNVL----VKIPAS 472
Query: 211 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
+ +L NL L R ++ + L G L NL+ L+L+ I+ + + +P L+ +D+S
Sbjct: 473 LPNSLTNLKLQRNRITTLKIDDLQG-LYNLKSLTLNDNDINAIEVGALGQLPVLEELDLS 531
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL- 329
+ IK + + L + L LE+ EQ+ ++ FP+ T + L+ L +
Sbjct: 532 DNPIKTLPANTLSGPSNLAKLR-MSGLTSLEQKQEEQSDMA----FPVPTPERLVFLDVS 586
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR---SLKLLDLHGG-WLLTE 385
R+ L L ++LS +L D TNS F P L++L+L W TE
Sbjct: 587 RSPVLARQLLADDAALSACKSLVQLDLSRTNSTSLRFDLPYMLPQLRILNLSANHWDCTE 646
Query: 386 D 386
D
Sbjct: 647 D 647
>gi|84043372|ref|XP_951476.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348176|gb|AAQ15503.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359981|gb|AAX80405.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
Length = 1393
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 174/400 (43%), Gaps = 37/400 (9%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA---DGIALLSSLQNLSVLDL 58
T ++EL+L+ C ++T G+ + ++ L + + L+ D + SL +S+ +
Sbjct: 342 TAIEELNLNGCRRIT-RGIDVVWALPKLRVFHMKDVHLSEPSLDSVGTGGSLVKVSLDNC 400
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TK 113
G D+ L L + LE L++ G L P L LN+ + T
Sbjct: 401 AGFG--DMSL--LSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNIKEVHISSLDFTG 456
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL----YIETSLLS 169
+ SL LN+ + T S +E N L K+SL G T I+ L ++ LS
Sbjct: 457 IGASKSLLQLNMESITGLSNVEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLS 516
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+ N SL C M +L +L M +V ++ + A L LNLSN +AG
Sbjct: 517 GTNTDNESLRSLCLSQTMVSL-NLSHCWKMT---NVSHISSLEA-LNELNLSNCIRINAG 571
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL---------KFIDISNTDIKGFIQQ 280
L L L + LS T I D ISY S +L K +D++ +++
Sbjct: 572 WEALE-KLQQLHVAILSNTHITDRGISYFSKCKNLVTLDLSFCNKLLDVTTLSNITTLEE 630
Query: 281 VGAET--DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDV 337
+ ++ ++ L+ L L L LN++ Q+ D+ + L K L+ LSL N DV
Sbjct: 631 LNLDSCSNIRKGLSVLGELPRLCVLNIKGVQLEDSVIGSLGNGKSLVRLSLENCKGFGDV 690
Query: 338 SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ LS+L L L++ SG+G+ L++LDL
Sbjct: 691 T--PLSNLVTLEELNLHYCDKVTSGMGTLGRLPQLRVLDL 728
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 181/444 (40%), Gaps = 115/444 (25%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TGL+ + L+++ L L L G D + L L +L+ LDL G+ N L
Sbjct: 472 TGLS--NVEALANILTLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSGTNTDNESLRSLC 529
Query: 97 MFPRLSFLNLA--WTGVTKLPNISSLECLN---LSNCT-IDSILEGNENKAPLAKISLAG 150
+ + LNL+ W +T + +ISSLE LN LSNC I++ E E L +++
Sbjct: 530 LSQTMVSLNLSHCWK-MTNVSHISSLEALNELNLSNCIRINAGWEALEKLQQL-HVAILS 587
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFC-------FLTQMKALEHLDLSS------ 197
T I +R + + L LD+S FC L+ + LE L+L S
Sbjct: 588 NTHITDRGISYFSKCKNLVTLDLS------FCNKLLDVTTLSNITTLEELNLDSCSNIRK 641
Query: 198 --SMIGD---------------DSV-------------EMVACVG----------ANLRN 217
S++G+ DSV + C G L
Sbjct: 642 GLSVLGELPRLCVLNIKGVQLEDSVIGSLGNGKSLVRLSLENCKGFGDVTPLSNLVTLEE 701
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
LNL ++G+G L G LP L +L L TQ+DD ++ + S+ + ++ + K
Sbjct: 702 LNLHYCDKVTSGMGTL-GRLPQLRVLDLGRTQVDDNSLENIC-TSSIPLVSLNFSHCKK- 758
Query: 278 IQQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQVSDATLFPLS 319
I + A + SLTAL+ LN L L T+++D + +S
Sbjct: 759 ITSISA----IASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRINDEKIRHVS 814
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNL---------SIRDAVLTNSGLGSFKPPR 370
K L L+L A D++ +++LSK+T L +IR + T LG+ R
Sbjct: 815 ECKSLNTLNL--AFCKDIT--DVTALSKITMLEELNLDCCPNIRKGIET---LGTLPKAR 867
Query: 371 SLKLLDLHGGWLLTEDAILQFCKM 394
L + + + G D Q C +
Sbjct: 868 ILSMKECYMG-----DGYAQQCSI 886
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 197/440 (44%), Gaps = 76/440 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C +TDA + ++ LE+L L+ GI L L L +LDL G+PV
Sbjct: 250 LSKLSVSECNNITDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRMLDLSGVPV 307
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 308 EDNCLKDLCDCGSLERLNISYCIQLTDINPLSNATAIEELNLNGCRRITRGIDVVWALPK 367
Query: 101 LSFLNLAWTGVTKLPNI------SSLECLNLSNC----------TIDSILEGNENKAP-- 142
L ++ +++ P++ SL ++L NC +I ++ E N K
Sbjct: 368 LRVFHMKDVHLSE-PSLDSVGTGGSLVKVSLDNCAGFGDMSLLSSIVTLEELNIQKCADI 426
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
++ + GT Y+ +L+ +V SSL F + K+L L++ S+ G
Sbjct: 427 ISGVGCLGT--------LPYLR--VLNIKEVHISSLD-FTGIGASKSLLQLNM-ESITGL 474
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
+VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++ + +
Sbjct: 475 SNVEALANI-LTLEKLSLHGCTDIDAGIGCL-GNLPQLKVLDLSGTNTDNESLRSLCLSQ 532
Query: 263 SLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQV 310
++ +++S+ T++ I + A +L LS AL+ L L L T +
Sbjct: 533 TMVSLNLSHCWKMTNV-SHISSLEALNELNLSNCIRINAGWEALEKLQQLHVAILSNTHI 591
Query: 311 SDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+D + S K L+ L L + L DV+ LS+++ L L++ GL
Sbjct: 592 TDRGISYFSKCKNLVTLDLSFCNKLLDVT--TLSNITTLEELNLDSCSNIRKGLSVLGEL 649
Query: 370 RSLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 650 PRLCVLNIKGVQL--EDSVI 667
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 180/440 (40%), Gaps = 83/440 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKL-----------W-------------LSETGL 39
L+ L+LS C VTD + L S+STLE+L W LS+T +
Sbjct: 963 LRSLNLSHCKWVTDISV--LSSLSTLEELNVNCCNAIRKGWESLGKLPLLRVAILSDTNI 1020
Query: 40 TADGIALLSSLQNLSVLDLGGLP-VTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
TA IA LSS + L L ++D+ V+ +Q L +L + G +G L
Sbjct: 1021 TAKDIACLSSCKKLVKLKFFRCKKLSDVTVVYKIQSLEELIVKNCSGGL---KGLNALGT 1077
Query: 98 FPRLSFLNL----------------------------AWTGVTKLPNISSLECLNLSNCT 129
PRL FL+L T T L NI+SLE L+L C
Sbjct: 1078 LPRLRFLHLRNVSGSDISVESIGTSKSLVRLNIETREELTDTTPLSNITSLEELSLRKCG 1137
Query: 130 IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS-SLSRFCFLTQMK 188
+ G K P + G + IN+ + + ++ L++++S L+ ++++
Sbjct: 1138 NNLEGVGTLGKLPRLRSLYLGLSRINDSTLYYICLSRSITSLNLASSWKLTDISHISKLT 1197
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
ALE L+L E ++ + LR LNL +TR ++ G +L LSL
Sbjct: 1198 ALEELNLRGCYPITSGWEALSEL-PRLRVLNLESTRVTTRYGGYYIRRCKSLVTLSLESC 1256
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+ D S ++ + +L+ + +G +L + L L L LNL +
Sbjct: 1257 DMTDA--SCLANIKTLEEL------------HIGRCKELRWGFSPLFTLPRLRILNLICS 1302
Query: 309 QVSDATLF---PLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLG 364
++D L P T +EL +LS L D++ L ++ S+ KL DA G
Sbjct: 1303 LITDEDLREIQPPHTIEEL-NLSY-CEELNDITPLGRIKSIKKLHLRQSHDARRPTEGFR 1360
Query: 365 SFKPPRSLKLLDLHG--GWL 382
S L +DL+ GW
Sbjct: 1361 SLLELPCLSWVDLNNVYGWF 1380
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 161/393 (40%), Gaps = 71/393 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L R V + + HL S+ TLE+L +++T + I +S L NL L+L +
Sbjct: 179 LKRLCL-RSNNVDNNDVCHLFSVGTLEELAITDT-MQLTNIRGISRLTNLMCLELNSTDI 236
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D + + KL L + S+ +N T T + +++LE L
Sbjct: 237 DDTCIGEISACAKLSKLSV--SECNN------------------ITDATPISQLAALEEL 276
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
NL++C I +G I L + LS + V ++ L C
Sbjct: 277 NLNSCY--HITKG-----------------IGTLGMLLRLRMLDLSGVPVEDNCLKDLC- 316
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+LE L++S + D + + LNL+ R + G+ ++ LP L +
Sbjct: 317 --DCGSLERLNISYCIQLTDINPLSN--ATAIEELNLNGCRRITRGIDVVWA-LPKLRVF 371
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQVGAETDL 287
+ + + ++ + SL + +S + GF IQ+ D+
Sbjct: 372 HMKDVHLSEPSLDSVGTGGSL--VKVSLDNCAGFGDMSLLSSIVTLEELNIQKCA---DI 426
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLS 346
+ + L L +L LN+++ +S + K L+ L++ S+T +S + L+++
Sbjct: 427 ISGVGCLGTLPYLRVLNIKEVHISSLDFTGIGASKSLLQLNME--SITGLSNVEALANIL 484
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L LS+ ++G+G LK+LDL G
Sbjct: 485 TLEKLSLHGCTDIDAGIGCLGNLPQLKVLDLSG 517
>gi|390341015|ref|XP_003725354.1| PREDICTED: protein slit-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 164/388 (42%), Gaps = 43/388 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ LK L+LS +V + +S L +L+L T L S L +DL
Sbjct: 243 LDALKFLNLSYN-RVNEKNQMIFTGLSQLTELYLQRNKFTRIDPTLFLSNTQLKKIDLSF 301
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ + + Q LE+LDL G+ ++ S +LA+ G ++L
Sbjct: 302 NRIKTIAPNAFQNQRLLEFLDLSGNSLT-------------SLNSLAFQGA------NAL 342
Query: 121 ECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L+LS+ +++ I++ N A L K++L G N A + + LS+L ++++++S
Sbjct: 343 RTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLPNI-TADTFGDIPSLSYLTLTDNNIS 401
Query: 180 RFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILA-- 234
R L + LE LDLS + + ++ A G A L LNL++ + L
Sbjct: 402 RISSNSLAGLVGLEFLDLSGNSL--RHLQAGALQGLAALMELNLADNKLYIVEPEALKTT 459
Query: 235 --GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
+ L L+L G Q+ + PSL+ + +S I L +
Sbjct: 460 QFSFMSQLTWLNLQGNQLIELQRGVFRGAPSLRVLTLSRNKI------------LRIVPD 507
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
A N L RL + + + L L LRN SLT++S L+ L+NL+
Sbjct: 508 AFSGFNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLDLRNNSLTEISDKAFQGLTALSNLN 567
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
+ + LTN + K R ++ L+L+
Sbjct: 568 LAENKLTNDKMKWLKNIRPVQTLNLNNN 595
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 159/390 (40%), Gaps = 52/390 (13%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T LK++DLS ++ + LE L LS LT+ L LDL
Sbjct: 292 TQLKKIDLS-FNRIKTIAPNAFQNQRLLEFLDLSGNSLTSLNSLAFQGANALRTLDLSSN 350
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPN 116
V +++ L L L+L G+ + N A P LS+L L +++ L
Sbjct: 351 SVNEIMDDVFTNLANLTKLNLKGNMLPNITADTFGDIPSLSYLTLTDNNISRISSNSLAG 410
Query: 117 ISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTT-FINEREAFLYIETSLLSFLDVS 174
+ LE L+LS ++ + G + A L +++LA +I E EA
Sbjct: 411 LVGLEFLDLSGNSLRHLQAGALQGLAALMELNLADNKLYIVEPEAL-------------- 456
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV---GANLRNLNLSNTRFSSAGVG 231
++F F++Q+ L ++ G+ +E+ V +LR L LS +
Sbjct: 457 --KTTQFSFMSQLTWL-------NLQGNQLIELQRGVFRGAPSLRVLTLSRNKILRIVPD 507
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-----KGFIQQVGAETD 286
+G L L +S + ++ +L+ +D+ N + K F Q + A ++
Sbjct: 508 AFSG-FNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLDLRNNSLTEISDKAF-QGLTALSN 565
Query: 287 LVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L L+ + L+N+ ++ LNL Q S + L +L L N +LT VS
Sbjct: 566 LNLAENKLTNDKMKWLKNIRPVQTLNLNNNQFSQMSSGDFEVAGNLRYLYLSNNNLTKVS 625
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 368
+ S L L NL++ + LT L F P
Sbjct: 626 VRNDSRLY-LYNLTLSNNRLTE--LMDFSP 652
>gi|17546075|ref|NP_519477.1| GALA protein 4 [Ralstonia solanacearum GMI1000]
gi|17428371|emb|CAD15058.1| type III effector protein gala6 [Ralstonia solanacearum GMI1000]
Length = 620
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 21/305 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LD+S V +AG + + L++L L+ ++ DG L+ ++L+ LDL +
Sbjct: 286 LTSLDVSNN-GVGNAGAEAFAGNTVLKQLSLAGGMISGDGAQALADNKSLTDLDLSNNRL 344
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
D ++L L L G+++ GA L L LNL++ GV L +
Sbjct: 345 GDAGAQALADSESFVSLKLGGNEIGADGAEALARNVVLQSLNLSYNPIGFWGVNAL-GRA 403
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAK-ISLA----GTTFINEREAFLYIETSLLSFLDV 173
L L+L C IDS + + LA+ SLA G+ I + A + S L+ L++
Sbjct: 404 KLRKLDLCACAIDS-----DGASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNL 458
Query: 174 SNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
S +++ L +L LDLS + IGDD +AC L +LNLS + S G
Sbjct: 459 SGNNIHAVGAQALASNDSLITLDLSRNGIGDDGTAALACH-PRLTSLNLSRNQIGSTGAQ 517
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
LA L L LS +I ++ L +++S I + AE+ + SL
Sbjct: 518 QLA-KSATLAELDLSENRIGPEGAEALARSTVLTTLNVSYNAIGEAGARALAESVSLTSL 576
Query: 292 TALQN 296
A +N
Sbjct: 577 DARRN 581
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 28/384 (7%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
L+ L++ RC ++ G+ HL S+ L+ L L+ + +G L++ ++L L L G
Sbjct: 165 LEHLEIGRCTGSAISAEGLAHLASM-PLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGC 223
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPN 116
+ D ++L ++ LDL +++ GA L P +S LNL G L
Sbjct: 224 GIGDRAAQALVASRSIQCLDLSVNRIGRDGAQALAGAPLVS-LNLHNNEIGNEGARVLAT 282
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+L L++SN + ++ E L ++SLAG I+ A + L+ LD+SN
Sbjct: 283 SRTLTSLDVSNNGVGNAGAEAFAGNTVLKQLSLAGG-MISGDGAQALADNKSLTDLDLSN 341
Query: 176 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ L L ++ L L + IG D E +A L++LNLS GV L
Sbjct: 342 NRLGDAGAQALADSESFVSLKLGGNEIGADGAEALA-RNVVLQSLNLSYNPIGFWGVNAL 400
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
L L L ID S ++ SL + + + I GA A
Sbjct: 401 G--RAKLRKLDLCACAIDSDGASALARNTSLASLYLGSNRIG----DDGAR--------A 446
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L + L LNL + L++ LI L L + D L+ +LT+L++
Sbjct: 447 LAKNSTLTLLNLSGNNIHAVGAQALASNDSLITLDLSRNGIGDDGTAALACHPRLTSLNL 506
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDL 377
+ ++G +L LDL
Sbjct: 507 SRNQIGSTGAQQLAKSATLAELDL 530
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++LDL C +D G L ++L L+L + DG L+ L++L+L G +
Sbjct: 405 LRKLDLCACAIDSD-GASALARNTSLASLYLGSNRIGDDGARALAKNSTLTLLNLSGNNI 463
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPNIS 118
+ ++L L LDL + + + G A L PRL+ LNL+ TG +L +
Sbjct: 464 HAVGAQALASNDSLITLDLSRNGIGDDGTAALACHPRLTSLNLSRNQIGSTGAQQLAKSA 523
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+L L+LS I G E LA+ +++L+ L+VS +++
Sbjct: 524 TLAELDLSENRI-----GPEGAEALAR-------------------STVLTTLNVSYNAI 559
Query: 179 SRFC--FLTQMKALEHLDLSSSMIGDDSVEMV 208
L + +L LD + IG+D +++
Sbjct: 560 GEAGARALAESVSLTSLDARRNGIGEDGAKVL 591
>gi|390341017|ref|XP_003725355.1| PREDICTED: protein slit-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 1012
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 164/386 (42%), Gaps = 43/386 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ LK L+LS +V + +S L +L+L T L S L +DL
Sbjct: 243 LDALKFLNLSYN-RVNEKNQMIFTGLSQLTELYLQRNKFTRIDPTLFLSNTQLKKIDLSF 301
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ + + Q LE+LDL G+ ++ S +LA+ G ++L
Sbjct: 302 NRIKTIAPNAFQNQRLLEFLDLSGNSLT-------------SLNSLAFQGA------NAL 342
Query: 121 ECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L+LS+ +++ I++ N A L K++L G N A + + LS+L ++++++S
Sbjct: 343 RTLDLSSNSVNEIMDDVFTNLANLTKLNLKGNMLPNI-TADTFGDIPSLSYLTLTDNNIS 401
Query: 180 RFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILA-- 234
R L + LE LDLS + + ++ A G A L LNL++ + L
Sbjct: 402 RISSNSLAGLVGLEFLDLSGNSL--RHLQAGALQGLAALMELNLADNKLYIVEPEALKTT 459
Query: 235 --GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
+ L L+L G Q+ + PSL+ + +S I L +
Sbjct: 460 QFSFMSQLTWLNLQGNQLIELQRGVFRGAPSLRVLTLSRNKI------------LRIVPD 507
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
A N L RL + + + L L LRN SLT++S L+ L+NL+
Sbjct: 508 AFSGFNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLDLRNNSLTEISDKAFQGLTALSNLN 567
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLH 378
+ + LTN + K R ++ L+L+
Sbjct: 568 LAENKLTNDKMKWLKNIRPVQTLNLN 593
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 159/390 (40%), Gaps = 52/390 (13%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T LK++DLS ++ + LE L LS LT+ L LDL
Sbjct: 292 TQLKKIDLS-FNRIKTIAPNAFQNQRLLEFLDLSGNSLTSLNSLAFQGANALRTLDLSSN 350
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPN 116
V +++ L L L+L G+ + N A P LS+L L +++ L
Sbjct: 351 SVNEIMDDVFTNLANLTKLNLKGNMLPNITADTFGDIPSLSYLTLTDNNISRISSNSLAG 410
Query: 117 ISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTT-FINEREAFLYIETSLLSFLDVS 174
+ LE L+LS ++ + G + A L +++LA +I E EA
Sbjct: 411 LVGLEFLDLSGNSLRHLQAGALQGLAALMELNLADNKLYIVEPEAL-------------- 456
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV---GANLRNLNLSNTRFSSAGVG 231
++F F++Q+ L ++ G+ +E+ V +LR L LS +
Sbjct: 457 --KTTQFSFMSQLTWL-------NLQGNQLIELQRGVFRGAPSLRVLTLSRNKILRIVPD 507
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-----KGFIQQVGAETD 286
+G L L +S + ++ +L+ +D+ N + K F Q + A ++
Sbjct: 508 AFSG-FNRLHRLMMSDNNLRRLPDGIFRLLRTLEMLDLRNNSLTEISDKAF-QGLTALSN 565
Query: 287 LVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L L+ + L+N+ ++ LNL Q S + L +L L N +LT VS
Sbjct: 566 LNLAENKLTNDKMKWLKNIRPVQTLNLNNNQFSQMSSGDFEVAGNLRYLYLSNNNLTKVS 625
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 368
+ S L L NL++ + LT L F P
Sbjct: 626 VRNDSRLY-LYNLTLSNNRLTE--LMDFSP 652
>gi|423616588|ref|ZP_17592422.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
gi|401258404|gb|EJR64590.1| hypothetical protein IIO_01914, partial [Bacillus cereus VD115]
Length = 590
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 31/268 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++G+ +PN+ SL N + T S N L ++L G + +
Sbjct: 226 FLNTNEILDYSGLKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEIV---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
I+ L LD+SN+ ++ LT+MK ++ L ++ + I D V +A +G L L
Sbjct: 279 VTPLIKMDNLESLDLSNNKITNVAPLTEMKNVKILYVAGNQIED--VTALAKMGQ-LDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L L N+ L+L+G Q++D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLRS-LKNVTYLTLAGNQVEDITPLYALPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + HL+ L++ ++ D T PLS L L L
Sbjct: 393 QLNQLDELWIGKNQIEDVTPLTKMTHLKVLDVPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRDA 356
++D+S +S L KLT LS IRD
Sbjct: 451 ISDLS--PISQLKKLTFLSLVANEIRDV 476
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 56/197 (28%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ V++ + NL +L+LSN + +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEIVDVTPLIKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ V L + N++IL ++G QI+D
Sbjct: 300 N--VAPLT-EMKNVKILYVAGNQIED---------------------------------- 322
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PL + K + +L+L + +Q+ ++
Sbjct: 323 ----VTALAKMGQLDYLNLANNKITNVA--PLRSLKNVTYLTL--------AGNQVEDIT 368
Query: 347 KLTNLSIRDAVLTNSGL 363
L L ++D VLT + +
Sbjct: 369 PLYALPLKDLVLTRNKV 385
>gi|428173313|gb|EKX42216.1| hypothetical protein GUITHDRAFT_74106 [Guillardia theta CCMP2712]
Length = 527
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 179/438 (40%), Gaps = 85/438 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE--------------------------T 37
L LD+S C+ VTD G+ L S+ +L + L T
Sbjct: 97 LTRLDMSNCIHVTDEGISRLRSLQSLRSIKLENCLRLGDATLEVIGELSSLSHLSVSACT 156
Query: 38 GLTADGIALLSSLQNLSVLDLGGLPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
+ + G++ LS L ++ L+L L D + SL+ LT L L+L + + L+
Sbjct: 157 RMASSGVSCLSQLVRMTDLNLERLTRLDSEGIESLEKLTNLRILNLGWTNADDDSFESLR 216
Query: 97 MFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTI--------------------- 130
PRL LN+ G+ L +++ LE L + +C +
Sbjct: 217 SLPRLKRLNVCACPFTEDGLQALCSLTQLESLRMCSCKVGATSALVELSSLGKLKLLDLS 276
Query: 131 ------DSILEGNENKAPLAKISLAGTTFINEREAFLY----IETSLLSFLDVSNSSLSR 180
D LE + L + LA T + +L ++T L V+N L
Sbjct: 277 QCEHVGDQTLEALRGLSDLKILLLAHTRVTDIGLGYLSSLWDLKTLNLDCCHVTNGGLQT 336
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
LT LE+LDLS +++ S + L++LNL +T S AGV + G L NL
Sbjct: 337 IANLTN---LENLDLSDNVV-TSSGLALLTGLTTLKSLNLFSTGVSDAGVIHVTG-LTNL 391
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQV----------GAETD 286
L+L I D ++ +S + +L+ +D+ + +I + G TD
Sbjct: 392 VRLNLDSRLITDSGLACISGLTNLQELDLFGAKVTHHGTIYIGLLTSLTSLELCGGGLTD 451
Query: 287 LVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
++ L+ L + LN+ Q + +S+ + P+S L L++ + + L+
Sbjct: 452 --EAMRELKRLTRMRNLNVSQNESLSNGSFIPMSRMSLLTSLNIAGTNFSSDGARHLTIF 509
Query: 346 SKLTNLSIRDAVLTNSGL 363
+ LT+L +R L+ + L
Sbjct: 510 TDLTSLCLRFDCLSRTCL 527
>gi|283777859|ref|YP_003368614.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
gi|283436312|gb|ADB14754.1| serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Length = 1487
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTD 65
++D + C + D +K L++++ LE L LS T +T G+A L L +L +DLG LP+T
Sbjct: 870 KVDFAGCRTIGDDDLKPLVALADLESLALSGTKITPAGLANLHGLASLKSIDLGTLPLTT 929
Query: 66 LVLRSLQV------LTKLEYLDLWGSQ--VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
+ +L + + E D ++ +S G + S + L + T LP
Sbjct: 930 ASVETLAAALPDCKIERREPADKLVARWVLSVGGKCTITSDESASQVELT-SATTVLPEA 988
Query: 118 S-SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ +E +NL++C I APLA I+ +++ LL D++++
Sbjct: 989 AIHVEKINLTDCKIGP-------DAPLASIA-----------ELANLKSLLLVGSDITDA 1030
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L+ L + L D + + +V + L+ L LS T+ GV + +
Sbjct: 1031 QLTSIAGLKSLSELSLSD---TAVTAPAVNGLLAQLPQLQRLYLSGTKVDR-GVLVAVTN 1086
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
LP L LSL+G ++ +S + P L+++D+S+T +
Sbjct: 1087 LPKLSHLSLAGIEVAPSDLSLLKKCPQLEWLDLSSTGL 1124
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 179/389 (46%), Gaps = 62/389 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+TDA + + + +L +L LS+T +TA + LL+ L L L L G V VL ++
Sbjct: 1027 ITDAQLTSIAGLKSLSELSLSDTAVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTN 1086
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLN---- 124
L KL +L L G +V+ ++LK P+L +L+L+ TG++ +L +SSL L
Sbjct: 1087 LPKLSHLSLAGIEVAPSDLSLLKKCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKN 1146
Query: 125 -LSNCTIDSILEGNEN----KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L++ + ++ N PL LA +I E+ + ++T ++ S L
Sbjct: 1147 PLTDAGQEELIAAMPNCHVVGDPLDPQRLA-ARWILEKRGTVELDTGAVT----SPKELP 1201
Query: 180 R-FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--- 235
R C + + E +L ++ + ++++A + L +L LS+T + A + +
Sbjct: 1202 RDKCHVLAIDLAELANLKAAEV----IQVIAGC-SELESLRLSDTAITDADLAAIGKLKL 1256
Query: 236 ----HLPNLEI----------------LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
+L NL I L +SG +I ++ SL+ +++SNT +
Sbjct: 1257 LKKLYLANLAITDDGLAKLAELELLEVLDVSGGRITGAGLANFRSASSLQELNLSNTML- 1315
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASL 334
TD +L A+ + L L++ + VSDA L L+ +L L LR L
Sbjct: 1316 ---------TDP--NLAAIAPMTSLISLDMSACRGVSDAGLKKLAGLTQLRSLGLRGTKL 1364
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
TD + L+S +KL L + + +SG+
Sbjct: 1365 TDAAAESLASYAKLEQLDLDSTSIGDSGV 1393
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 168/372 (45%), Gaps = 32/372 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L L+ +TD G+ L + +L KL L+ T +T G+ L+ L L+ LDL +
Sbjct: 697 LRQLSLA-ATPITDTGIASLAKLKSLAKLSLARTAITNKGLESLARLSQLAELDLSSTKI 755
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
TD L L L+KLE L L + +S+ G L M L L + T +++ + L
Sbjct: 756 TDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLLVASGTMLSERGHGVLTAAL 815
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
+ T D G + + +A + L ER A L + + + V +
Sbjct: 816 PQTEITWD----GADMQRQVALVLL-------ERGARLSVADMRGNIVPV--VARREDLP 862
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ ++K L+ IGDD ++ + + A+L +L LS T+ + AG+ L G L +L+ +
Sbjct: 863 IGRLKVLKVDFAGCRTIGDDDLKPLVAL-ADLESLALSGTKITPAGLANLHG-LASLKSI 920
Query: 244 SLSGTQIDDYAISYM-SMMPSLKFIDISNTD--IKGFIQQVG-----------AETDLVL 289
L + ++ + + +P K D + ++ VG ++ +L
Sbjct: 921 DLGTLPLTTASVETLAAALPDCKIERREPADKLVARWVLSVGGKCTITSDESASQVELTS 980
Query: 290 SLTALQNLN-HLERLNLEQTQVS-DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ T L H+E++NL ++ DA L ++ L L L + +TD L ++ L
Sbjct: 981 ATTVLPEAAIHVEKINLTDCKIGPDAPLASIAELANLKSLLLVGSDITDAQLTSIAGLKS 1040
Query: 348 LTNLSIRDAVLT 359
L+ LS+ D +T
Sbjct: 1041 LSELSLSDTAVT 1052
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLP--NLEILSL--SGTQIDDYAISYMSMMPSLK 265
+G + N S F V LP +LEIL++ G + D ++ + + P L+
Sbjct: 643 ALGGRVTAANSSGREF----VATTPTELPAESLEILAIDFEGRGVTDSDLASLELAPGLR 698
Query: 266 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
+ ++ T I TD + +L L L +L+L +T +++ L L+ +L
Sbjct: 699 QLSLAATPI----------TDT--GIASLAKLKSLAKLSLARTAITNKGLESLARLSQLA 746
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
L L + +TD L +L +LSKL L + D L+++GL +SL+LL + G +L+E
Sbjct: 747 ELDLSSTKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLL-VASGTMLSE 805
Query: 386 DAILQFCKMHPRIEV-W 401
P+ E+ W
Sbjct: 806 RGHGVLTAALPQTEITW 822
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 180/415 (43%), Gaps = 63/415 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L ELDLS K+TD G+ LL++S LE+L+LS+ L+ +G+ L+ ++L +L G
Sbjct: 745 LAELDLS-STKITDQGLTRLLALSKLERLYLSDNSLSDNGLEQLAMAKSLRLLVASG--- 800
Query: 64 TDLVLRSLQVLT-KLEYLDL-WGSQVSNRGAA--VLKMFPRLSFLNLAWTGVT------K 113
T L R VLT L ++ W R A +L+ RLS ++ V
Sbjct: 801 TMLSERGHGVLTAALPQTEITWDGADMQRQVALVLLERGARLSVADMRGNIVPVVARRED 860
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAK------ISLAGTTFINEREAFLYIETSL 167
LP I L+ L + +I G+++ PL ++L+GT A L+ SL
Sbjct: 861 LP-IGRLKVLKVDFAGCRTI--GDDDLKPLVALADLESLALSGTKITPAGLANLHGLASL 917
Query: 168 ----LSFLDVSNSSLSRF------CFLTQMKALEHL--------DLSSSMIGDDSVEMVA 209
L L ++ +S+ C + + + + L ++ D+S V
Sbjct: 918 KSIDLGTLPLTTASVETLAAALPDCKIERREPADKLVARWVLSVGGKCTITSDESASQVE 977
Query: 210 CVGA---------NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
A ++ +NL++ + L NL+ L L G+ I D ++ ++
Sbjct: 978 LTSATTVLPEAAIHVEKINLTDCKIGPDAPLASIAELANLKSLLLVGSDITDAQLTSIAG 1037
Query: 261 MPSLKFIDISNT-----DIKGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQ 307
+ SL + +S+T + G + Q+ L LS L A+ NL L L+L
Sbjct: 1038 LKSLSELSLSDTAVTAPAVNGLLAQLPQLQRLYLSGTKVDRGVLVAVTNLPKLSHLSLAG 1097
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+V+ + L L +L L L + L+D + QL LS L L++ LT++G
Sbjct: 1098 IEVAPSDLSLLKKCPQLEWLDLSSTGLSDEASQQLVGLSSLRELAVPKNPLTDAG 1152
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT L LD+S C V+DAG+K L ++ L L L T LT L+S L LDL
Sbjct: 1326 MTSLISLDMSACRGVSDAGLKKLAGLTQLRSLGLRGTKLTDAAAESLASYAKLEQLDLDS 1385
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
+ D + L LT L L L + V++ G A L L ++L T VT+
Sbjct: 1386 TSIGDSGVEKLLSLTSLRRLVLAKTSVTDGGVASLAKLKDLRSVSLVRTSVTE 1438
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L+ ++V+ S LS L + LE LDLSS+ + D++ + + + ++LR L + +
Sbjct: 1095 LAGIEVAPSDLS---LLKKCPQLEWLDLSSTGLSDEASQQLVGL-SSLRELAVPKNPLTD 1150
Query: 228 AGVGILAGHLPNLE---------------ILSLSGT-QIDDYAISYMSMMPSLKFIDISN 271
AG L +PN IL GT ++D A++ +P K +
Sbjct: 1151 AGQEELIAAMPNCHVVGDPLDPQRLAARWILEKRGTVELDTGAVTSPKELPRDK-CHVLA 1209
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
D+ AE V++ + LE L L T ++DA L + K L L L N
Sbjct: 1210 IDLAELANLKAAEVIQVIA-----GCSELESLRLSDTAITDADLAAIGKLKLLKKLYLAN 1264
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
++TD L +L+ L L L + +T +GL +F+ SL+ L+L
Sbjct: 1265 LAITDDGLAKLAELELLEVLDVSGGRITGAGLANFRSASSLQELNL 1310
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 30/238 (12%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
S LE L LS+T +T +A + L+ L L L L +TD L L L LE LD+ G +
Sbjct: 1231 SELESLRLSDTAITDADLAAIGKLKLLKKLYLANLAITDDGLAKLAELELLEVLDVSGGR 1290
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS------SLECLNLSNCTIDSILEGNENK 140
++ G A + L LNL+ T +T PN++ SL L++S C +
Sbjct: 1291 ITGAGLANFRSASSLQELNLSNTMLTD-PNLAAIAPMTSLISLDMSACR-------GVSD 1342
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
A L K LAG T + L + + L+ D + SL+ + LE LDL S+ I
Sbjct: 1343 AGLKK--LAGLTQLRS----LGLRGTKLT--DAAAESLASYA------KLEQLDLDSTSI 1388
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
GD VE + + + R + L+ T + GV LA L +L +SL T + + A + +
Sbjct: 1389 GDSGVEKLLSLTSLRRLV-LAKTSVTDGGVASLA-KLKDLRSVSLVRTSVTEAACTEL 1444
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSG 247
+L+ L+LS++M+ D ++ +A + +L +L++S R S AG+ LAG L L L L G
Sbjct: 1304 SLQELNLSNTMLTDPNLAAIAPM-TSLISLDMSACRGVSDAGLKKLAG-LTQLRSLGLRG 1361
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
T++ D A ++ L+ +D+ +T I G E L L+ L +
Sbjct: 1362 TKLTDAAAESLASYAKLEQLDLDSTSIG----DSGVEKLLSLTSLRRLVL--------AK 1409
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
T V+D + L+ K+L +SL S+T+ + +L
Sbjct: 1410 TSVTDGGVASLAKLKDLRSVSLVRTSVTEAACTEL 1444
>gi|326427049|gb|EGD72619.1| hypothetical protein PTSG_04354 [Salpingoeca sp. ATCC 50818]
Length = 1165
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 61
++ L V VTDA ++ L TL +L + + LT GIA L NL+ L L G
Sbjct: 767 IQHLAFRSSVVVTDAFLRVLGTQFPTLYELEIYDCPMLTFRGIAALKGAPNLASLHLSGA 826
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-NLAWTGVTK-----LP 115
TD + +L L LE+ L G++VS++ A P + L +LA T LP
Sbjct: 827 -FTDSCVDALMSLHPLEHFSLNGARVSSQQFARFLSSPTATHLQSLALTSCPALDDGILP 885
Query: 116 NI---SSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFL 171
+I + L L+LS + ++ G P L ++L+ T +ERE + ++ L
Sbjct: 886 SICGLTDLGHLSLSKTPVRAV--GQLASLPHLYSLNLS-YTRASEREVGALAAATNMTTL 942
Query: 172 DVSNSSLSRFCFL--TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSA 228
+ +LS + +L L LSS DD+ C ++ L+LS + +
Sbjct: 943 GLFGLNLSSDAYAPWAGHGSLAELTLSSRDSFDDACLAHVCTLTHVTTLDLSGYYQLTPD 1002
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMS--MMPSLKFIDISNTDIKGFIQQVGAETD 286
G+ +A + L+ LSLS T + D A+ ++ +PSL DIS TD+ TD
Sbjct: 1003 GLKAIAA-MQQLQSLSLSNTALTDAALLHIGGVGLPSLDTFDISRTDV----------TD 1051
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLF---PLSTFKELIHLSLRNASLTDVSLHQLS 343
A + + RLNL +T++++ T F L+ L LS+ + L +L+
Sbjct: 1052 ACAP--AFKGFAAVARLNLSRTRITN-TFFHAHALNDCAALQTLSIERTHTSTKGLAELN 1108
Query: 344 SLSKLTNLSIR 354
LS+L +++ R
Sbjct: 1109 GLSRLQSVNAR 1119
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 45/321 (14%)
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ L RS V+T +L + G+Q + P L+F +A + PN++SL
Sbjct: 767 IQHLAFRSSVVVTDA-FLRVLGTQFPTLYELEIYDCPMLTFRGIA--ALKGAPNLASL-- 821
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
+LS DS ++ + PL SL G VS+ +RF
Sbjct: 822 -HLSGAFTDSCVDALMSLHPLEHFSLNGAR--------------------VSSQQFARFL 860
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L+ L L+S DD + C +L +L+LS T + VG LA LP+L
Sbjct: 861 SSPTATHLQSLALTSCPALDDGILPSICGLTDLGHLSLSKTPVRA--VGQLAS-LPHLYS 917
Query: 243 LSLSGTQIDDY---AISYMSMMPSLKFIDIS-NTDIKGFIQQVGAETDLVLS-------- 290
L+LS T+ + A++ + M +L ++ ++D G+ +L LS
Sbjct: 918 LNLSYTRASEREVGALAAATNMTTLGLFGLNLSSDAYAPWAGHGSLAELTLSSRDSFDDA 977
Query: 291 -LTALQNLNHLERLNLE-QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS--SLS 346
L + L H+ L+L Q++ L ++ ++L LSL N +LTD +L + L
Sbjct: 978 CLAHVCTLTHVTTLDLSGYYQLTPDGLKAIAAMQQLQSLSLSNTALTDAALLHIGGVGLP 1037
Query: 347 KLTNLSIRDAVLTNSGLGSFK 367
L I +T++ +FK
Sbjct: 1038 SLDTFDISRTDVTDACAPAFK 1058
>gi|157865941|ref|XP_001681677.1| putative surface antigen protein [Leishmania major strain Friedlin]
gi|68124975|emb|CAJ02737.1| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 776
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 155/384 (40%), Gaps = 65/384 (16%)
Query: 49 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 108
S+ +L L+L G V+ + + L L+L G+QVS L LNL
Sbjct: 300 SMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEG 359
Query: 109 TGVT-KLP----NISSLECLNLSNCTIDSILEGNE-NKAPLAKISLAGTTF-------IN 155
T V+ LP +++SL LNL + L + A L ++L GT +
Sbjct: 360 TQVSGSLPPQWVSMASLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWS 419
Query: 156 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI-GDDSVEMVACVGAN 214
E ++ +E L VS + R+ ++MK+L L+L + + G E V+ A+
Sbjct: 420 EMKSLTSLE---LEGTQVSGTLPPRW---SEMKSLRTLNLEGTQVSGSLPPEWVSM--AS 471
Query: 215 LRNLNLSNTRFSSA-----------------GVGILAGHLP-------NLEILSLSGTQI 250
LR LNL T+ S G + +G LP +L L+L GTQ+
Sbjct: 472 LRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQV-SGTLPPRWSEMKSLRTLNLEGTQV 530
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ--------------- 295
M SL+ +++ T + G + +E SLT+L+
Sbjct: 531 SGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMK---SLTSLELEGTQVSGTLPPRWS 587
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+ L LNLE TQVS A K L +L L L+ + + LTNL +
Sbjct: 588 EMKSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRGMKSLTNLYLEG 647
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHG 379
++ S + SL+ LDL G
Sbjct: 648 TQVSGSLPPQWSSLTSLRTLDLEG 671
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 146/359 (40%), Gaps = 61/359 (16%)
Query: 48 SSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA 107
SS+++L L+L G V+ + + L L+L G+QVS L LNL
Sbjct: 227 SSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGTQVSGTLPPGWSSIKSLRTLNLE 286
Query: 108 WTGVT-KLP----NISSLECLNLSNCTIDSIL-EGNENKAPLAKISLAGTTFINEREAFL 161
T V+ LP +++SL LNL + L G L + L GT
Sbjct: 287 GTQVSGSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGT---------- 336
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNL 220
VS + R+ ++MK+L L+L + + G + V+ A+LR LNL
Sbjct: 337 ----------QVSGTLPPRW---SEMKSLRTLNLEGTQVSGSLPPQWVSM--ASLRTLNL 381
Query: 221 SNTRFSSAGVGILAGHLP-------NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
T+ S G LP +L L+L GTQ+ S M SL +++ T
Sbjct: 382 EGTQVS--------GSLPPEWVSMASLRTLNLEGTQVSGTLPPGWSEMKSLTSLELEGTQ 433
Query: 274 IKGFIQQVGAETD--LVLSLTALQ----------NLNHLERLNLEQTQVSDATLFP-LST 320
+ G + +E L+L Q ++ L LNLE TQVS TL P S
Sbjct: 434 VSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEGTQVS-GTLPPGWSE 492
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
K L L L ++ + S + L L++ ++ S + SL+ L+L G
Sbjct: 493 MKSLTSLELEGTQVSGTLPPRWSEMKSLRTLNLEGTQVSGSLPPEWVSMASLRTLNLEG 551
>gi|343421695|emb|CCD18730.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 582
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 179/407 (43%), Gaps = 48/407 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ELDL C + + G++ L + L L L + + +D + L ++L L+L
Sbjct: 176 LQELDLGLCRSINE-GVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSCKR 234
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNIS--- 118
L + L + L LDL G + L L LNL T VT LP +S
Sbjct: 235 L-LDVSPLSEIKTLVELDLSLCCSLFTGVSELGKLQCLRILNLRNTAVTDHSLPGLSESD 293
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKI-SLAGTTF---------INEREAFLYIETSLL 168
SLE LNLS+C G N +PL +I SL I A ++ T L
Sbjct: 294 SLEILNLSSC------RGLTNVSPLKEIKSLVQLDLSNCPALRDGIGSLVALPFLCTLKL 347
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
++N SL C + ++LE LD SS D + V L LNLS
Sbjct: 348 RNTAITNESLRDIC---ESESLEELDASSCTALSDVFHIS--VLNTLVELNLSFCPNLVK 402
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQV--- 281
G+ +A LP L L +SGT I ++ + + SL+ + + + TD+ ++ ++
Sbjct: 403 GMEAIAS-LPFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNNLTDV-FYLSKISTL 460
Query: 282 -----GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLT 335
G L + L L L LNLE T+ ++ + LST + L L L + +L+
Sbjct: 461 LRLDLGCCISLQKGVGTLGKLPRLRILNLEGTRAANDWIIGLSTSRSLAVLILSSCLALS 520
Query: 336 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPP--RSLKLLDLHG 379
DVSL L+++ L L I + V SG + K P R LK+ D++
Sbjct: 521 DVSL--LANIEPLEELDISNCVSIRSGAEALLKLPQIRVLKMYDVNA 565
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 55/210 (26%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ELD S C ++D + H+ ++TL +L LS G+ ++SL L LD+ G P+
Sbjct: 366 LEELDASSCTALSD--VFHISVLNTLVELNLSFCPNLVKGMEAIASLPFLRALDISGTPI 423
Query: 64 TDLVLRSLQVLTKLEYLDL----------WGSQVS-------------NRGAAVLKMFPR 100
T+ LR L+ LE + L + S++S +G L PR
Sbjct: 424 TNHCLRGLRKSNSLETVSLRSCNNLTDVFYLSKISTLLRLDLGCCISLQKGVGTLGKLPR 483
Query: 101 LSFLN----------------------------LAWTGVTKLPNISSLECLNLSNCTIDS 132
L LN LA + V+ L NI LE L++SNC S
Sbjct: 484 LRILNLEGTRAANDWIIGLSTSRSLAVLILSSCLALSDVSLLANIEPLEELDISNCV--S 541
Query: 133 ILEGNENKAPLAKISLAGTTFINEREAFLY 162
I G E L +I + +N +Y
Sbjct: 542 IRSGAEALLKLPQIRVLKMYDVNAFGKHIY 571
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 66/384 (17%)
Query: 47 LSSLQNLSVLDLGGLPVTDLV--------------LRSLQVLT---------KLEYLDLW 83
+ L+NL LDL G V D V LR Q L+ L+ LDL
Sbjct: 123 IGGLKNLRELDLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLG 182
Query: 84 GSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNE 138
+ N G L P L LNL V +L SLE LNLS+C +L+
Sbjct: 183 LCRSINEGVQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSC--KRLLD--- 237
Query: 139 NKAPLAKI--------SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMK 188
+PL++I SL + F E + L L++ N++++ L++
Sbjct: 238 -VSPLSEIKTLVELDLSLCCSLFTGVSELG---KLQCLRILNLRNTAVTDHSLPGLSESD 293
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
+LE L+LSS G +V + + + L L+LSN G+G L LP L L L T
Sbjct: 294 SLEILNLSSCR-GLTNVSPLKEIKS-LVQLDLSNCPALRDGIGSLVA-LPFLCTLKLRNT 350
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET-----------DLVLSLTALQNL 297
I + ++ + SL+ +D S+ + + +LV + A+ +L
Sbjct: 351 AITNESLRDICESESLEELDASSCTALSDVFHISVLNTLVELNLSFCPNLVKGMEAIASL 410
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDA 356
L L++ T +++ L L L +SLR+ +LTDV LS +S L L +
Sbjct: 411 PFLRALDISGTPITNHCLRGLRKSNSLETVSLRSCNNLTDV--FYLSKISTLLRLDLGCC 468
Query: 357 VLTNSGLGSF-KPPRSLKLLDLHG 379
+ G+G+ K PR L++L+L G
Sbjct: 469 ISLQKGVGTLGKLPR-LRILNLEG 491
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 48/254 (18%)
Query: 205 VEMVACVG-------ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
+E++ C G ANL +L + + R S V G L NL L LSGT++ D
Sbjct: 87 IEIIMCKGIFDLSILANLGSLEVLSVRGSRVHVTGSIGGLKNLRELDLSGTRVQDEVFYE 146
Query: 258 MSMMPSLKFIDISN----------TDIKGFIQ-QVGAETDLVLSLTALQNLNHLERLNLE 306
+S P+L +++ DI+ + +G + + L L +L LNLE
Sbjct: 147 LSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLGLCRSINEGVQDLAELPNLRVLNLE 206
Query: 307 QTQVSDATLF-----------------------PLSTFKELIHLSLRNASLTDVSLHQLS 343
+ V +LF PLS K L+ L L + +L
Sbjct: 207 KVNVPSDSLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKTLVELDLSLCCSLFTGVSELG 266
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHE 403
L L L++R+ +T+ L SL++L+L LT + L+ K ++++ +
Sbjct: 267 KLQCLRILNLRNTAVTDHSLPGLSESDSLEILNLSSCRGLTNVSPLKEIKSLVQLDLSN- 325
Query: 404 LSVICPS--DQIGS 415
CP+ D IGS
Sbjct: 326 ----CPALRDGIGS 335
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 170/386 (44%), Gaps = 37/386 (9%)
Query: 28 TLEKLWLSETGLTADGIALLSSLQNLSVL-DLGGLPVTDL------VLRSLQVLTKLEYL 80
+LE+L + T LT I + + +LS+L +LG L V + V S+ L L L
Sbjct: 74 SLEQLRIC-TRLTHIEIIMCKGIFDLSILANLGSLEVLSVRGSRVHVTGSIGGLKNLREL 132
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNL----AWTGVTKLPNISSLECLNLSNCTIDSILEG 136
DL G++V + L P L+ +NL + V+ L +I SL+ L+L C SI EG
Sbjct: 133 DLSGTRVQDEVFYELSENPNLTKVNLRQCQGLSDVSPLADIESLQELDLGLCR--SINEG 190
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF---CFLTQMKALEHL 193
++ A L + + +N L+ S ++ SS R L+++K L L
Sbjct: 191 VQDLAELPNLRVLNLEKVNVPSDSLFELCKSRSLEKLNLSSCKRLLDVSPLSEIKTLVEL 250
Query: 194 DLS---SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
DLS S G + + C LR LNL NT + + L+ +LEIL+LS +
Sbjct: 251 DLSLCCSLFTGVSELGKLQC----LRILNLRNTAVTDHSLPGLSES-DSLEILNLSSCR- 304
Query: 251 DDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLTALQN---LNHLERL 303
+S + + SL +D+SN D G + + L L TA+ N + E
Sbjct: 305 GLTNVSPLKEIKSLVQLDLSNCPALRDGIGSLVALPFLCTLKLRNTAITNESLRDICESE 364
Query: 304 NLEQTQVSDAT----LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
+LE+ S T +F +S L+ L+L + ++SL L L I +T
Sbjct: 365 SLEELDASSCTALSDVFHISVLNTLVELNLSFCPNLVKGMEAIASLPFLRALDISGTPIT 424
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTE 385
N L + SL+ + L LT+
Sbjct: 425 NHCLRGLRKSNSLETVSLRSCNNLTD 450
>gi|290978242|ref|XP_002671845.1| predicted protein [Naegleria gruberi]
gi|284085417|gb|EFC39101.1| predicted protein [Naegleria gruberi]
Length = 439
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 151/360 (41%), Gaps = 45/360 (12%)
Query: 3 CLKEL---DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
CLK L D+S +++D +KH +++ L L ++ + +G L L L+ L++G
Sbjct: 98 CLKNLTRIDISD-NEISDERVKHFGNLTHLTNLVINCNDIGVEGAKCLCQLNQLTRLNIG 156
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL----- 114
+ + + L L LD+ + + +RGA + +L+ LNL G+ L
Sbjct: 157 NNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFITEMKQLTSLNLNRNGIEYLGAKFI 216
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ L L++SN I G+E ++K+ +I + +
Sbjct: 217 SEMYQLTSLDISNNDI-----GSEGAKQISKLDQLTKLYIYD-----------------N 254
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
N +++MK L +LD+S + I + + + C L NLN+ + G ++
Sbjct: 255 NIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSI-CELYQLTNLNICSNYIGETGAKHIS 313
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
+ NL IL + +I ++S M L + I DI + GA+ +
Sbjct: 314 -EMNNLTILEIGSNEIGSEGAYHISRMHQLTRLMIFANDIG----EKGAK--------HV 360
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+ L +L++ + D +S K+L +L + ++ + L++LT L++
Sbjct: 361 SEMKQLTKLDIYDNNIGDEGTIHISEMKQLTYLDVSANNIGHEGAEYIRKLNRLTFLNVH 420
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 41/231 (17%)
Query: 168 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
L+ L++ N+SL +++++K L LD++ + IGD + +
Sbjct: 150 LTRLNIGNNSLETEGAKYISELKNLTKLDIARNCIGDRGAQFIT---------------- 193
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
+ L L+L+ I+ ++S M L +DISN DI G+E
Sbjct: 194 ----------EMKQLTSLNLNRNGIEYLGAKFISEMYQLTSLDISNNDI-------GSE- 235
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+ L+ L +L + + D +S K+L +L + + + L
Sbjct: 236 ----GAKQISKLDQLTKLYIYDNNIGDEGAMHISEMKQLTNLDISRNDIDSEGAKSICEL 291
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP 396
+LTNL+I + +G +L +L++ + +E A +MH
Sbjct: 292 YQLTNLNICSNYIGETGAKHISEMNNLTILEIGSNEIGSEGA-YHISRMHQ 341
>gi|290994342|ref|XP_002679791.1| predicted protein [Naegleria gruberi]
gi|284093409|gb|EFC47047.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 24/286 (8%)
Query: 97 MFPRLSFLNLA--WTGVTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTF 153
M L+ LN++ W G IS L+ L + + + I+ N + + +I+
Sbjct: 1 MKHNLTSLNISRNWIGEEGAKYISELDNLTILDIHGNDIVANGANHISKMKRITTLSVGL 60
Query: 154 IN-EREAFLYI-ETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA 209
N +E YI E L+ L+++N+++ F++ +K L L + + IGD + ++
Sbjct: 61 NNLGKEGTKYISEMKQLTNLEINNNNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLS 120
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ L LN+ GV + + L L +S I Y+S M L+ +DI
Sbjct: 121 EL-KQLTRLNIGENNIGDEGVKHIL-EMKQLTDLDISNNNIRHKGSEYISGMNQLRILDI 178
Query: 270 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
++ +I +GA+ + + L LN+ Q D +S K+L L L
Sbjct: 179 NSCNI----DPIGAQ--------KISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLEL 226
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
N ++D+ +S +SKLTNL I + L++ G+ + ++KL+
Sbjct: 227 FNCDISDIGAKCVSEMSKLTNLDIGENNLSDEGV---RAVSNMKLM 269
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G KHL + L +L + E + +G+ + ++ L+ LD+ + + +
Sbjct: 111 IGDVGTKHLSELKQLTRLNIGENNIGDEGVKHILEMKQLTDLDISNNNIRHKGSEYISGM 170
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
+L LD+ + GA + +L+ LN+AW G + ++ L L L NC
Sbjct: 171 NQLRILDINSCNIDPIGAQKISEMKQLTDLNIAWNQFGDEGAKFISDMKQLTTLELFNCD 230
Query: 130 IDSI 133
I I
Sbjct: 231 ISDI 234
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 130/326 (39%), Gaps = 60/326 (18%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
MKH L+ + + W+ E +G +S L NL++LD+ G D+V ++K++
Sbjct: 1 MKHNLTSLNISRNWIGE-----EGAKYISELDNLTILDIHG---NDIVANGANHISKMKR 52
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 139
+ ++N G K ++++ +++LE N
Sbjct: 53 ITTLSVGLNNLGKEGTKY-------------ISEMKQLTNLEINN--------------- 84
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
I G FI+ + + + DV LS ++K L L++ +
Sbjct: 85 ----NNIQEEGAKFISGLKQLTELSIHFNNIGDVGTKHLS------ELKQLTRLNIGENN 134
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
IGD+ V+ + + L +L++SN G ++G + L IL ++ ID +S
Sbjct: 135 IGDEGVKHILEM-KQLTDLDISNNNIRHKGSEYISG-MNQLRILDINSCNIDPIGAQKIS 192
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
M L TD+ Q G E +S ++ L L L +SD +S
Sbjct: 193 EMKQL-------TDLNIAWNQFGDEGAKFIS-----DMKQLTTLELFNCDISDIGAKCVS 240
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSL 345
+L +L + +L+D + +S++
Sbjct: 241 EMSKLTNLDIGENNLSDEGVRAVSNM 266
>gi|406830084|ref|ZP_11089678.1| hypothetical protein SpalD1_00552 [Schlesneria paludicola DSM
18645]
Length = 249
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDL V+D G+K L +S L L L+ TG+ G+ L L L L L G +
Sbjct: 113 LETLDLE-LSDVSDEGLKSLGRLSQLRGLGLNHTGIADIGLGYLRPLTGLQGLHLDGTKI 171
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
TD ++ LQ ++ L+ L L + VS+ G VL L LNLA + VT+ +S +
Sbjct: 172 TDAGVKHLQSMSHLQILKLSNTLVSDAGVEVLFDLHELQILNLAESRVTRRGFVSLRQA- 230
Query: 124 NLSNCTIDSILE 135
L NC + I +
Sbjct: 231 -LPNCELPVIFD 241
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
G TD V+ L L HLE L+LE + VSD L L +L L L + + D+ L
Sbjct: 97 GKNTDRVVPSLCL--LKHLETLDLELSDVSDEGLKSLGRLSQLRGLGLNHTGIADIGLGY 154
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L L+ L L + +T++G+ + L++L L
Sbjct: 155 LRPLTGLQGLHLDGTKITDAGVKHLQSMSHLQILKL 190
>gi|44888778|gb|AAS48159.1| LRR protein WM1.7 [Aegilops tauschii]
Length = 1102
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 171/432 (39%), Gaps = 84/432 (19%)
Query: 23 LLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ LE L LS L LL S+ NL L+L G+P V L L+KL+Y
Sbjct: 118 LLSLKHLEHLDLSVNCLLGSNNQIPHLLGSMGNLRYLNLSGIPFNGRVPSQLGNLSKLQY 177
Query: 80 LDLWGSQVSNRGA--------AVLKMFPRLSFLNLAWTGVTKLPN----ISSLECLNLSN 127
LDL G G L + LS + +G+ P+ + SL ++L+
Sbjct: 178 LDL-GQDTGCPGMYSTDITWLTKLHVLKFLSMRGVNLSGIADWPHNLNMLPSLRIIDLTV 236
Query: 128 CTIDSILEG--NENKAPLAKISLAGTTFINE-REAFLYIETSL----------------- 167
C++DS + + N L ++ L F + + + TSL
Sbjct: 237 CSLDSADQSLPHLNLTKLERLDLNNNDFEHSLTYGWFWKATSLKYLNLGYNGLFGQFPDT 296
Query: 168 ------LSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDD-SVEMVA---CVGAN 214
L LD+S + ++ L + +LE +DLS + I D SV M + C
Sbjct: 297 LGNMTNLQVLDISVNKITDMMMTGNLENLCSLEIIDLSRNEINTDISVMMKSLPQCTWKK 356
Query: 215 LRNLNLSNTRFSSA--------------------GVGILAGHLPNLEILS---LSGTQID 251
L+ L+L +F VG + L NL L+ L G +
Sbjct: 357 LQELDLGGNKFRGTLPNFIGDFTRLSVLWLDYNNLVGPIPPQLGNLTCLTSLDLGGNHLT 416
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVS 311
+ + + +L ++DI + D+ G V AE L NL +L L L +++
Sbjct: 417 GSIPTELGALTTLTYLDIGSNDLNG---GVPAE---------LGNLRYLTALYLSDNEIA 464
Query: 312 DATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 371
+ L + L L L + + QL +L+ LT L +R+ LT S S
Sbjct: 465 GSIPPQLGNLRSLTALDLSDNEIAGSIPPQLGNLTGLTYLELRNNHLTGSIPRELMHSTS 524
Query: 372 LKLLDLHGGWLL 383
L +LDL G L+
Sbjct: 525 LTILDLPGNHLI 536
>gi|261331843|emb|CBH14837.1| leucine-rich repeat protein (LRRP, pseudogene),putative
[Trypanosoma brucei gambiense DAL972]
Length = 1517
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 145/315 (46%), Gaps = 35/315 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L EL+LS C ++ +AG + L + L LS T +T I+ S +NL LDL
Sbjct: 625 LNELNLSDCFEI-NAGWEALEKLQQLHVAILSNTHITDGDISHFSKCKNLVTLDLSFCDK 683
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNIS 118
L + +L +T LE L+L +G +VL PRL LN L + + L N
Sbjct: 684 L-LDVTALSNITTLEDLNLSNCSKIRKGLSVLGELPRLRVLNVKGVLLEDSVIGSLGNGK 742
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL--LSFLDVS-- 174
S L+L NC ++ N L +++L + ++ + + SL L LD+
Sbjct: 743 SFAKLSLENCKGFGDVKPLSNLVTLEELNLH---YCDKVTSGMGTLGSLPQLRVLDLGRT 799
Query: 175 ---NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
N+SL C T L L+LS S+ +A + A L LN+ N ++G
Sbjct: 800 QADNNSLENIC--TSSIPLVLLNLSHCK-KITSISTIASLTA-LEELNIDNCCNVTSGWN 855
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
+ G L L + +LS T+I+D I Y+S SL ++++ F + + TD +
Sbjct: 856 VF-GTLHQLRVATLSNTRINDENIRYVSECKSLNTLNLA------FCKDI---TD----V 901
Query: 292 TALQNLNHLERLNLE 306
TAL + LE LNL+
Sbjct: 902 TALSKITMLEELNLD 916
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 150/376 (39%), Gaps = 55/376 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L ++ L C D M L SI TLE+L + + G+ L +L L L GLP
Sbjct: 445 LVKVSLDNCAGFGD--MTLLSSIVTLEELNIQKCVDIISGVGCLGTLPYLVYLTWCGLPW 502
Query: 64 TDLVLRSLQVL-TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNISSLE 121
V R L + + LD G S K +L+ ++ + V L NI +LE
Sbjct: 503 YTTVPRVLNIKEAHISSLDFTGICAS-------KSLLQLNMESITGLSNVEALANILTLE 555
Query: 122 CLNLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L+L C ID+++ N L + L+GT NE L + +++S +LS
Sbjct: 556 KLSLLGCNGIDAVIGCLGNPPQLKMLDLSGTNTDNESLRSLCLSQTMVSL------NLSH 609
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
+T M + L+ L LNLS+ +AG L L L
Sbjct: 610 CWKMTNMSHISSLEA-------------------LNELNLSDCFEINAGWEALE-KLQQL 649
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
+ LS T I D IS+ S +L +D+S F D +L +TAL N+ L
Sbjct: 650 HVAILSNTHITDGDISHFSKCKNLVTLDLS------F-------CDKLLDVTALSNITTL 696
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
E LNL L L L L+++ L D + L + LS+ +
Sbjct: 697 EDLNLSNCSKIRKGLSVLGELPRLRVLNVKGVLLEDSVIGSLGNGKSFAKLSLENC---- 752
Query: 361 SGLGSFKPPRSLKLLD 376
G G KP +L L+
Sbjct: 753 KGFGDVKPLSNLVTLE 768
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 202/506 (39%), Gaps = 109/506 (21%)
Query: 3 CLK--ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
C+K +L +S C + DA + ++ LE+L L+ GI L L L VLDL G
Sbjct: 300 CVKLFKLSVSECNNIMDA--TPISQLAALEELNLNSCYHITKGIGTLGMLLRLRVLDLSG 357
Query: 61 LPVTDLVLRSLQVLTKLEYLDLW-----------------------GSQVSNRGAAVLKM 97
PV D L+ L LE L+L G + RG V+ +
Sbjct: 358 APVEDNFLKDLCDCGSLERLNLSYCIQLTDINPLSNAAATEELNLNGCRRITRGMGVVWV 417
Query: 98 FPRLSFLNL----------------------------AWTGVTKLPNISSLECLNLSNCT 129
P+L L++ + +T L +I +LE LN+ C
Sbjct: 418 LPKLRVLHMKDMHLSEPSLDSVGTGGPLVKVSLDNCAGFGDMTLLSSIVTLEELNIQKC- 476
Query: 130 IDSILE-GNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
+D I G P L ++ G + L I+ + +S LD F +
Sbjct: 477 VDIISGVGCLGTLPYLVYLTWCGLPWYTTVPRVLNIKEAHISSLD--------FTGICAS 528
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K+L L++ S + G +VE +A + L L+L A +G L G+ P L++L LSG
Sbjct: 529 KSLLQLNMES-ITGLSNVEALANI-LTLEKLSLLGCNGIDAVIGCL-GNPPQLKMLDLSG 585
Query: 248 TQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQ 295
T D+ ++ + + ++ +++S+ T++ I + A +L LS AL+
Sbjct: 586 TNTDNESLRSLCLSQTMVSLNLSHCWKMTNM-SHISSLEALNELNLSDCFEINAGWEALE 644
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L L L T ++D + S K L+ L L S D L +++LS +T L D
Sbjct: 645 KLQQLHVAILSNTHITDGDISHFSKCKNLVTLDL---SFCD-KLLDVTALSNITTL--ED 698
Query: 356 AVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 415
L+N K + L +L G L PR+ V + V+ IGS
Sbjct: 699 LNLSNCS----KIRKGLSVL----GEL-------------PRLRVLNVKGVLLEDSVIGS 737
Query: 416 NGPSPSRTSLRASLVKQKQDPMPMSH 441
G S L K D P+S+
Sbjct: 738 LGNGKSFAKLSLENCKGFGDVKPLSN 763
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 157/396 (39%), Gaps = 78/396 (19%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V + G +HL +I TLE+L +++T A+ I +S L NL L+L + D +R +
Sbjct: 242 VDNNGARHLFNIGTLEELVIADTMQLAN-IRGISRLTNLKCLELNSTDIDDSCVRRICAC 300
Query: 75 TK-----------------------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
K LE L+L +G L M RL L+L+ V
Sbjct: 301 VKLFKLSVSECNNIMDATPISQLAALEELNLNSCYHITKGIGTLGMLLRLRVLDLSGAPV 360
Query: 112 -----TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
L + SLE LNLS C + + N A +++L G I +++
Sbjct: 361 EDNFLKDLCDCGSLERLNLSYCIQLTDINPLSNAAATEELNLNGCRRITRGMGVVWVLPK 420
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----------ANLR 216
L L + + LS +L+ + ++ V + C G L
Sbjct: 421 -LRVLHMKDMHLSE-------PSLDSVGTGGPLV---KVSLDNCAGFGDMTLLSSIVTLE 469
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP---SLKFIDISNTD 273
LN+ +GVG L G LP L L+ G + + + +P ++K IS+ D
Sbjct: 470 ELNIQKCVDIISGVGCL-GTLPYLVYLTWCG-------LPWYTTVPRVLNIKEAHISSLD 521
Query: 274 IKGFIQ-----QVGAETDLVLS-LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
G Q+ E+ LS + AL N+ LE+L+L DA + L +L L
Sbjct: 522 FTGICASKSLLQLNMESITGLSNVEALANILTLEKLSLLGCNGIDAVIGCLGNPPQLKML 581
Query: 328 SLR-----NASLTDVSLHQ------LSSLSKLTNLS 352
L N SL + L Q LS K+TN+S
Sbjct: 582 DLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMTNMS 617
>gi|406833162|ref|ZP_11092756.1| hypothetical protein SpalD1_16026 [Schlesneria paludicola DSM
18645]
Length = 447
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L+ +K L L L++S+I D VE + L L+LS+ + GV + +L L+ L
Sbjct: 128 LSGLKGLTSLALTNSVINDSGVETIVKSFPELTELDLSSNTNMTNGVVKIISNLGKLQRL 187
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L QI+D +S + L+ +D+ G D+ L + A L HL+
Sbjct: 188 TLVQNQINDIGAQRLSKLQELRSLDLRGNMEAG---------DMTLEVVA--GLPHLQSF 236
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI-------RDA 356
T V+D+ L LS + L L L++ +TD S L+ LSKL+ L I D
Sbjct: 237 KHRSTAVNDSGLEYLSQGQALESLLLQDFVITDQSGPHLAKLSKLSQLEIFRCQGFGSDG 296
Query: 357 VLTNSGLG 364
VL G+G
Sbjct: 297 VLALKGMG 304
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 166/377 (44%), Gaps = 60/377 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSVLDLG-GL 61
LK+L + C + D + L + L L L+ + + G+ ++ S L+ LDL
Sbjct: 109 LKKLQIFNCRTLNDEMVAQLSGLKGLTSLALTNSVINDSGVETIVKSFPELTELDLSSNT 168
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+T+ V++ + L KL+ L L +Q+++ GA RLS KL + SL+
Sbjct: 169 NMTNGVVKIISNLGKLQRLTLVQNQINDIGA------QRLS----------KLQELRSLD 212
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
L GN + +AG + ++F + T+ V++S L
Sbjct: 213 ------------LRGNMEAGDMTLEVVAGLPHL---QSFKHRSTA------VNDSGLE-- 249
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAG-HLPN 239
+L+Q +ALE L L +I D S +A + + L L + + F S GV L G L
Sbjct: 250 -YLSQGQALESLLLQDFVITDQSGPHLAKL-SKLSQLEIFRCQGFGSDGVLALKGMGLIR 307
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L + L +DD A+ +P L+ + ++ ++ + D L L L
Sbjct: 308 LTLRDLP--NVDDRAMEVFDDLPQLRRL---------YLHELTSVGDA--GLKHLAGLKS 354
Query: 300 LERLNLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD-AV 357
LE L++ Q++D T+ +S L LS+R +TD ++ +L ++ L +L+ ++
Sbjct: 355 LELLDIWTVPQMTDETVDVISQLPNLKDLSIRVTGVTDSAIDKLLTMKSLQSLTFKENGS 414
Query: 358 LTNSGLGSFKPPRSLKL 374
+T GL + KL
Sbjct: 415 ITAEGLKKLSARKWSKL 431
>gi|289433761|ref|YP_003463633.1| hypothetical protein lse_0394 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170005|emb|CBH26545.1| leucine-rich repeat, cell wall anchor family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 1770
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 94/401 (23%), Positives = 180/401 (44%), Gaps = 73/401 (18%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T ++ +D S C + G + I+TLE + LS + I L +L NL+ +
Sbjct: 309 TSIQLIDASNCTDMETVG--DISGITTLEMIQLSGCSKLKE-ITDLKNLPNLTNITANNC 365
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ DL +L+ L KL+ L L G++ NL T V + ++ L+
Sbjct: 366 IIEDL--GTLENLPKLQTLILSGNE------------------NL--TDVDAINDLPQLK 403
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
+ L C I +I EN L K+ + G + E + LS+LD S + L+
Sbjct: 404 TVALDGCGITNI-GTLENLPKLEKLDIKGNKVTDISEI---TDLPRLSYLDASENQLTTI 459
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPN 239
L ++ L+ L++S + + D V+ + +L +N+SN ++ G LP+
Sbjct: 460 GTLAKLPLLDWLNISENQLKD-----VSTINNFPSLNYINVSNNSITTFGK---MTELPS 511
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ ++ D IS + MP+L+ +++SN +L+ +L +NL
Sbjct: 512 LKEFYGQFNKVTD--ISMIHDMPNLRKLNVSN--------------NLINNLGTFENLPK 555
Query: 300 LERLNLEQTQVSDATL---FP-LSTFKELIHL--------SLRNASLTDVSLHQLSSLSK 347
L+ L++ ++++ T+ FP L T+ +L +L + ++S +++ SL
Sbjct: 556 LQNLDIHSNKITNTTVIHDFPSLETYDASSNLISTLGTMDNLPEVTTINLSSNRIPSLEP 615
Query: 348 LTNLSIRDAVLTNSG------LGSFKPPRSLKLLDLHGGWL 382
+ +L D +L NS +GS +L++L+L+ ++
Sbjct: 616 IGDLPKLDTLLVNSNSSYLRTVGSLDGLPALRILELNSNYI 656
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 85/370 (22%), Positives = 151/370 (40%), Gaps = 70/370 (18%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+ L+ + L G+T I L +L L LD+ G VTD+ + L +L YLD +
Sbjct: 399 LPQLKTVALDGCGIT--NIGTLENLPKLEKLDIKGNKVTDI--SEITDLPRLSYLDASEN 454
Query: 86 QVSNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP 142
Q++ G L P L +LN++ V+ + N SL +N+SN +I + + E
Sbjct: 455 QLTTIGT--LAKLPLLDWLNISENQLKDVSTINNFPSLNYINVSNNSITTFGKMTE---- 508
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG- 201
L + F + + + L L+VSN+ ++ + L++LD+ S+ I
Sbjct: 509 LPSLKEFYGQFNKVTDISMIHDMPNLRKLNVSNNLINNLGTFENLPKLQNLDIHSNKITN 568
Query: 202 -------------DDSVEMVACVGA-----NLRNLNLSNTRFSS---------------- 227
D S +++ +G + +NLS+ R S
Sbjct: 569 TTVIHDFPSLETYDASSNLISTLGTMDNLPEVTTINLSSNRIPSLEPIGDLPKLDTLLVN 628
Query: 228 ------AGVGILAGHLPNLEILSLSGTQI-------------DDYAISYMSMMPSLKFID 268
VG L G LP L IL L+ I D + +SM + +D
Sbjct: 629 SNSSYLRTVGSLDG-LPALRILELNSNYINYTGKEATLSAFSDLTNLIELSMKDNYYIVD 687
Query: 269 ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
+S ++ + + + + +T L NL L L L ++ D + LS+ +L +L
Sbjct: 688 LSGLSSLTNLRYLYLDNNRIEDVTPLSNLTELRELTLGTNKIQDIS--ALSSLNKLANLV 745
Query: 329 LRNASLTDVS 338
+++ + D+S
Sbjct: 746 VKSNKIIDIS 755
>gi|290984031|ref|XP_002674731.1| predicted protein [Naegleria gruberi]
gi|284088323|gb|EFC41987.1| predicted protein [Naegleria gruberi]
Length = 356
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 29/253 (11%)
Query: 136 GNENKAPLAKISLAGTTFI--NE--REAFLYI-ETSLLSFLDVS--NSSLSRFCFLTQMK 188
GNE ++K+ +I NE E YI E + L LD+S N + +++++K
Sbjct: 111 GNEGAKYISKLKQLTHLYILNNEIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELK 170
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L +LD+S + IG + + +A + L LN+S G + G L L L++
Sbjct: 171 QLTNLDISVNHIGAEGAQHIAEMNQ-LTILNISTNNIGYEGAKYI-GKLKQLTCLTIFNN 228
Query: 249 QIDDYAISYMSMMPSLKFIDIS--NTDIKG--FIQQVGAETDLVLSLTALQNLNHLERLN 304
ID Y+S M L ++IS N D++G +I ++ TDL +S+
Sbjct: 229 NIDVEGAKYISEMKQLTDLNISYNNIDVEGAKYISELKQLTDLDISIN------------ 276
Query: 305 LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLG 364
Q+ + ++ +L LS + ++ D +S + +LTNL I + ++N G+
Sbjct: 277 ----QIGAKGVQYIAEMNQLTILSASHNNIGDEGAKYISEMKQLTNLDISNNSISNEGVK 332
Query: 365 SFKPPRSLKLLDL 377
+ + L +L++
Sbjct: 333 CIEEMKHLTVLNI 345
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G K++ ++ L L +S + +G +S L+ L+ LD + V + Q
Sbjct: 133 EIDDEGAKYISELNQLVSLDISYNNIGVEGAKYISELKQLTNLD---ISVNHIGAEGAQH 189
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
+ ++ L + +S N+ + G + + L CL + N ID
Sbjct: 190 IAEMNQLTIL----------------NISTNNIGYEGAKYIGKLKQLTCLTIFNNNID-- 231
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
+ G +I+E + + S + +DV + +++++K L L
Sbjct: 232 --------------VEGAKYISEMKQLTDLNIS-YNNIDVEGAK-----YISELKQLTDL 271
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
D+S + IG V+ +A + L ILS S I D
Sbjct: 272 DISINQIGAKGVQYIA--------------------------EMNQLTILSASHNNIGDE 305
Query: 254 AISYMSMMPSLKFIDISNTDI 274
Y+S M L +DISN I
Sbjct: 306 GAKYISEMKQLTNLDISNNSI 326
>gi|290994540|ref|XP_002679890.1| predicted protein [Naegleria gruberi]
gi|284093508|gb|EFC47146.1| predicted protein [Naegleria gruberi]
Length = 293
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 33/253 (13%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G K + + L L + + G+ +G L+S ++ L+ LD+ G + D ++S+ + +L
Sbjct: 42 GAKLISEMKQLTSLNIFKNGIGVEGAKLISEMKQLTSLDISGNLIYDEGVKSISEMKQLT 101
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSI 133
LD+ +++ GA ++ +L+ LN++ G + + L L + ID
Sbjct: 102 SLDISKNEIGVEGAKLISGMKQLTSLNISKNEISDEGAKLISEMKQLTSLTIYKSGIDD- 160
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALE 191
G +++E + L+ LD+S++ + F+++MK L
Sbjct: 161 ---------------KGAKYLSEIKQ--------LTSLDISSNPMGVEGAKFISEMKQLT 197
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
LD+S+++I D+ E ++ + L +LN+SN G +++ + L L + +I
Sbjct: 198 SLDISNNLIYDEGAEFISGM-KQLTSLNISNNIILDEGAKLIS-EMKQLTSLDICYNEIG 255
Query: 252 DYAISYMSMMPSL 264
D ++S M L
Sbjct: 256 DEGAKFISGMKQL 268
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F++++K L LD+S + IG + ++++ + L +LN+ G +++ + L
Sbjct: 21 FISEIKQLTSLDISDNQIGVEGAKLISEM-KQLTSLNIFKNGIGVEGAKLIS-EMKQLTS 78
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L +SG I D + +S M L +DIS +I G E ++S + L
Sbjct: 79 LDISGNLIYDEGVKSISEMKQLTSLDISKNEI-------GVEGAKLIS-----GMKQLTS 126
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LN+ + ++SD +S K+L L++ + + D LS + +LT+L I + G
Sbjct: 127 LNISKNEISDEGAKLISEMKQLTSLTIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEG 186
Query: 363 LGSFKPPRSLKLLDLHGGWLLTEDA 387
+ L LD+ + E A
Sbjct: 187 AKFISEMKQLTSLDISNNLIYDEGA 211
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+++MK L LD+S + IG + ++++ + L +LN+S S G +++ + L L
Sbjct: 94 ISEMKQLTSLDISKNEIGVEGAKLISGM-KQLTSLNISKNEISDEGAKLIS-EMKQLTSL 151
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDLVLS--------L 291
++ + IDD Y+S + L +DIS+ ++G FI ++ T L +S
Sbjct: 152 TIYKSGIDDKGAKYLSEIKQLTSLDISSNPMGVEGAKFISEMKQLTSLDISNNLIYDEGA 211
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ + L LN+ + D +S K+L L + + D +S + +LT+L
Sbjct: 212 EFISGMKQLTSLNISNNIILDEGAKLISEMKQLTSLDICYNEIGDEGAKFISGMKQLTSL 271
Query: 352 SI 353
+
Sbjct: 272 YV 273
>gi|417302467|ref|ZP_12089567.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
gi|327541207|gb|EGF27751.1| conserved hypothetical protein, secreted [Rhodopirellula baltica
WH47]
Length = 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 131
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 132 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L+ E K L +++ I E + I L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 191 EHLD 194
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIISLPHLKLLHLGKTSVSPDA 301
Query: 363 LGSFKPPRSLKLL 375
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|290980851|ref|XP_002673145.1| predicted protein [Naegleria gruberi]
gi|284086726|gb|EFC40401.1| predicted protein [Naegleria gruberi]
Length = 468
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 46/343 (13%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G KH+ + L L+++ + +G L L+NL+ L++ + + + L +L
Sbjct: 128 GAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNLTYLNISENDIGVEGAKYISELKQLT 187
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LD+ + + GA + +L+ L N+ G + ++ L+ LN+S ++
Sbjct: 188 DLDISYNNIGTEGAKYISDLKQLTTLDIESNNIGTEGAKYISELNQLQVLNISYSSLGD- 246
Query: 134 LEGNENKAPLAKISLAGTTFINEREAF--LYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
G +I+E + LYI SL+ S ++ ++++MK L
Sbjct: 247 ---------------KGAQYISEMKQLTHLYISDSLIR------SEGAK--YISEMKQLT 283
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGTQI 250
+L + ++ I D+ + ++ + L L + R S G L+ L NL +L + +I
Sbjct: 284 NLFIENNDIDDEGAKHISTM-KELTKLYMQGNRLISDEGAKYLS-ELKNLTVLFIGDNRI 341
Query: 251 DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV 310
+ ++S + +L I +S T+I G E LS LN L L + +
Sbjct: 342 GNEGAKHLSELKNLTSIYVSYTEI-------GDEGAKYLS-----ELNKLTILQIGYNGI 389
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+S KEL L ++ ++ + +S L +LT+L I
Sbjct: 390 GAEGAKHISNLKELTMLKIQYNNIGNEGAKYISELKQLTDLDI 432
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 26/198 (13%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+ D G KH+ ++ L KL++ L +D G LS L+NL+VL +G + + + L
Sbjct: 292 IDDEGAKHISTMKELTKLYMQGNRLISDEGAKYLSELKNLTVLFIGDNRIGNEGAKHLSE 351
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNLSNCTID 131
L L + + +++ + GA L +L+ L + + G+ +IS+L+ L + +
Sbjct: 352 LKNLTSIYVSYTEIGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYN 411
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKA 189
+I GNE G +I+E + L+ LD+S +++ +L+QMK
Sbjct: 412 NI--GNE-----------GAKYISELKQ--------LTDLDISYNNIGTEGADYLSQMKQ 450
Query: 190 LEHLDLSSSMIGDDSVEM 207
L HL++ ++ ++ M
Sbjct: 451 LTHLEIETNSDAEEGENM 468
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 20 MKHLLSISTLEKLW--LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
MKH+ S+ + + +E G+ +G +S ++ L+ L + + + L+ L L
Sbjct: 103 MKHVTSLEIDDNIEGTTNENGIGVEGAKHVSEMKQLTNLYVNANNIGTEGAKFLRELKNL 162
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILE 135
YL++ + + GA + +L+ L++++ G IS L+ L T+D +E
Sbjct: 163 TYLNISENDIGVEGAKYISELKQLTDLDISYNNIGTEGAKYISDLKQL----TTLD--IE 216
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHL 193
N I G +I+E + L L++S SSL ++++MK L HL
Sbjct: 217 SN-------NIGTEGAKYISE--------LNQLQVLNISYSSLGDKGAQYISEMKQLTHL 261
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS---LSGTQ- 249
+S S+I + + ++ + L NL + N G A H+ ++ L+ + G +
Sbjct: 262 YISDSLIRSEGAKYISEM-KQLTNLFIENNDIDDEG----AKHISTMKELTKLYMQGNRL 316
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
I D Y+S + +L + I + ++G E L L +L + + T+
Sbjct: 317 ISDEGAKYLSELKNLTVLFIGDN-------RIGNE-----GAKHLSELKNLTSIYVSYTE 364
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP 369
+ D LS +L L + + +S+L +LT L I+ + N G
Sbjct: 365 IGDEGAKYLSELNKLTILQIGYNGIGAEGAKHISNLKELTMLKIQYNNIGNEGAKYISEL 424
Query: 370 RSLKLLDLHGGWLLTEDA 387
+ L LD+ + TE A
Sbjct: 425 KQLTDLDISYNNIGTEGA 442
>gi|242071073|ref|XP_002450813.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
gi|241936656|gb|EES09801.1| hypothetical protein SORBIDRAFT_05g018970 [Sorghum bicolor]
Length = 621
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 172/439 (39%), Gaps = 110/439 (25%)
Query: 46 LLSSLQNLSVLDLGGLPVT-----------------------DLVLRS-----LQVLTKL 77
L S+ +L LDL +P + D +LRS L L L
Sbjct: 129 FLGSMNSLKYLDLSDVPFSGRVPSQLGNLSNLQYLHLSSSTQDSLLRSTDLSWLTHLHFL 188
Query: 78 EYLDLWGSQVSNRG--AAVLKMFPRLSFLNLAWTGVTK----LP--NISSLECLNLS--- 126
+YL L+G +S G A + M P L L L + +T LP N+++LE L+LS
Sbjct: 189 QYLRLYGVNLSAVGDWALAVNMIPSLKVLELCYCSLTNAEQSLPRLNLTNLEKLDLSGNL 248
Query: 127 ------NCTIDSI-------LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
+C +I LE + PL ++L G ++ + L I +S+ SFL+
Sbjct: 249 LGHPIASCWFWNITHLKHLDLESTDLYGPLP-LALGGMKYLED----LRISSSISSFLN- 302
Query: 174 SNSSLSRFCFLTQMK---ALEHLDLSSSMIGDDS---VEMVACVGANLRNLNLSNTRFSS 227
+ F+T ++ +LE L + ++ G+ + + C L+ LNL + S
Sbjct: 303 ------KCIFITSLRNLCSLETLCIRYTLCGEITEILESLPRCSPNRLQELNLESNNIS- 355
Query: 228 AGVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
G LPN LE L L G I ++M + SL ++D+S +I G +
Sbjct: 356 -------GTLPNQMWPLTSLESLDLYGNNIGGTLPNWMGQLTSLGYLDLSQNNISGMLPD 408
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+L+ L LE L L ++ + F L +L L LT
Sbjct: 409 ------------SLRMLTGLEYLALTYNNITGPLPSFVGEFTGLSYLDLSYNRLTGQVPR 456
Query: 341 QLSSLSKLTNLSIR----DAVLTNSGLGSFKPPRSLKL------LDLHGGW---LLTEDA 387
++ L L NL + D +T S K R L L +++ W + A
Sbjct: 457 EIGMLRNLENLDLTSNNLDGTITEEHFASLKSLRWLDLSYNSLKIEISSEWQPPFRLQQA 516
Query: 388 ILQFCKMHPRIEVWHELSV 406
C+M P W +L V
Sbjct: 517 DFASCRMGPAFPSWLKLMV 535
>gi|290984930|ref|XP_002675179.1| predicted protein [Naegleria gruberi]
gi|284088774|gb|EFC42435.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+ R + G + + + L +L ++ + G +S L L+ LD+
Sbjct: 53 MKHLTHLDI-RNNGIGYEGAQSIGKVMQLTRLCIAGNNIGEKGAKSISQLTQLTTLDVSF 111
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVTKLP 115
+ D + + L++L L++ G++++++GA L L FLN++ G+ L
Sbjct: 112 NQLCDYGTKFISQLSRLTDLNIRGNRITDKGAIFLSDLKELRFLNISSNTILLEGIKSLT 171
Query: 116 NISSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTF--INEREAFLYI-ETSLLSFL 171
N+ L L++S N + S + L ++L+ + ++ YI E L L
Sbjct: 172 NLKQLTQLDISYNNILPSYAQTISEMDQLTNLNLSYNDYGWGSDSNGVRYICEMKNLKTL 231
Query: 172 DVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+ ++ F + +MK L L++ SS IG S ++++ + L L++S G
Sbjct: 232 TFGGICIRQYIFNYIKEMKQLACLNIRSSYIGSSSAKLISSMNQ-LTELDISYNEIGDVG 290
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
++ + L L++ G +I+ Y+ M L +++IS
Sbjct: 291 AKHIS-EMDQLTSLNVEGCRINSEGTEYLKQMKQLTYLNIS 330
>gi|46446916|ref|YP_008281.1| hypothetical protein pc1282 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400557|emb|CAF24006.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila
UWE25]
Length = 1082
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLD 57
+ L+ LDLS C TDAG+ HL + L L W LT G+A L+ L L LD
Sbjct: 817 LVTLQHLDLSYCSNFTDAGLAHLRPLVALTHLNLRWCR--NLTDAGLAHLTPLVALKYLD 874
Query: 58 LGGLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
L TD L L L L++LDL S ++ G A L+ L+ LNL W
Sbjct: 875 LSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLRWCHNFTDA 934
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
G+ L + +L+ LNL+ C K++ AG + A ++ S
Sbjct: 935 GLAHLTPLVALQHLNLNLC---------------WKLTDAGLAHLRPLVALQNLDLSY-- 977
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSS 197
SN + + LT + L+HLDLSS
Sbjct: 978 ---CSNFTDAGLAHLTPLVVLQHLDLSS 1002
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 129/273 (47%), Gaps = 47/273 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
LK L L C +TDAG+ HL S+ TL+ L LS + T G+A L L L+ L+L
Sbjct: 795 LKALHLQECPNLTDAGLAHLTSLVTLQHLDLSYCSNFTDAGLAHLRPLVALTHLNLRWCR 854
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+TD L L L L+YLDL S SN A G+T L + +L+
Sbjct: 855 NLTDAGLAHLTPLVALKYLDL--SYCSNFTDA----------------GLTHLTPLVTLQ 896
Query: 122 CLNLSNCTIDSILEGNENKAPLAKI-SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L+LS C+ N A LA + L T +N R + + L
Sbjct: 897 HLDLSCCS-------NFTDAGLAHLRPLVALTHLNLRWCHNFTDAGL------------- 936
Query: 181 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLP 238
LT + AL+HL+L+ + D + + + A L+NL+LS + F+ AG+ L L
Sbjct: 937 -AHLTPLVALQHLNLNLCWKLTDAGLAHLRPLVA-LQNLDLSYCSNFTDAGLAHLTP-LV 993
Query: 239 NLEILSLSG-TQIDDYAISYMSMMPSLKFIDIS 270
L+ L LS ++ D +++++ + +L+ +D+S
Sbjct: 994 VLQHLDLSSCKKLTDAGLAHLTPLVALQHLDLS 1026
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS-ETGLTADGIALLSSLQNLSVLDLG 59
+ LK LDLS C TDAG+ HL + TL+ L LS + T G+A L L L+ L+L
Sbjct: 867 LVALKYLDLSYCSNFTDAGLTHLTPLVTLQHLDLSCCSNFTDAGLAHLRPLVALTHLNLR 926
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------T 109
TD L L L L++L+L W ++++ G A L+ L L+L++
Sbjct: 927 WCHNFTDAGLAHLTPLVALQHLNLNLCW--KLTDAGLAHLRPLVALQNLDLSYCSNFTDA 984
Query: 110 GVTKLPNISSLECLNLSNC 128
G+ L + L+ L+LS+C
Sbjct: 985 GLAHLTPLVVLQHLDLSSC 1003
>gi|187779624|ref|ZP_02996097.1| hypothetical protein CLOSPO_03220 [Clostridium sporogenes ATCC
15579]
gi|187773249|gb|EDU37051.1| leucine Rich Repeat protein [Clostridium sporogenes ATCC 15579]
Length = 1360
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 191/420 (45%), Gaps = 60/420 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELDL +++++S LEKL LS T + I+LL+ L NL +++ +
Sbjct: 358 IKELDLHNTHVERLNAIENMIS---LEKLNLSGTDIQ--DISLLNELTNLKEVNISDTNI 412
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
++ R+L+ ++YL++ ++V+N +K + L ++ T V+ +P++ SL+ L
Sbjct: 413 NNI--RALENSPYIKYLNINKTEVAN--LEYIKNMKHIEKLYVSDTKVSTIPDLVSLKEL 468
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL-------YIETSLLSFLDVSNS 176
N+SNC + +I E + L+K++ + + + L Y++ L +L ++ +
Sbjct: 469 NISNCNVTNI----EFISSLSKLTYLCLSNVQIKGHILDNIDNIKYLKN--LEYLSIAGT 522
Query: 177 SLSRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVA--CVGANLRNLN 219
+ + ++ L+ LD++ +IG+++V M A + +R L
Sbjct: 523 DVVNIDVVKELINLKKLDITGCTKINTEILSHLSNVEIIGNETV-MFADKALEKEIREL- 580
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----- 274
+ I L ++ L LSG I D SM +L ++D+SN +I
Sbjct: 581 -----IKNYSEPIYKRQLSSITKLELSGKGIKDLQ-GLESMKDTLTYLDLSNNEISDISS 634
Query: 275 -KGFI--QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
KG I ++ + + S+ ++ L L+ L+L + D T L +L L L
Sbjct: 635 LKGLINLNKLVLHKNKIGSIKPIEYLKSLKELDLSNNIIGDIT--ALGGLSQLTRLDLSK 692
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
+ VS+ LS L L LS+ + ++ G S K SLK L L + D L +
Sbjct: 693 NGV--VSIANLSGLENLQYLSLYENKIS-EGEESLKKLYSLKELYLKNSGVSNFDVTLSY 749
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 161/388 (41%), Gaps = 81/388 (20%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV------------------ 67
+S++ KL LS G+ D L S L+ LDL ++D+
Sbjct: 593 LSSITKLELSGKGI-KDLQGLESMKDTLTYLDLSNNEISDISSLKGLINLNKLVLHKNKI 651
Query: 68 --LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL 125
++ ++ L L+ LDL + + + A L +L+ L+L+ GV + N+S LE L
Sbjct: 652 GSIKPIEYLKSLKELDLSNNIIGDITA--LGGLSQLTRLDLSKNGVVSIANLSGLENLQY 709
Query: 126 SNCTIDSILEGNE-------------NKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
+ + I EG E + ++ + + + N + + + F +
Sbjct: 710 LSLYENKISEGEESLKKLYSLKELYLKNSGVSNFDVTLSYYNNLEKKDFTTHSDFIVFDE 769
Query: 173 VSNSSLSRF------------CFLTQMKALEHLDLSSSMIGDDSVEM-VACVGANLRNLN 219
S S L++ F ++ + LDLS I D ++ + G N+ +L
Sbjct: 770 KSESDLAKITREILGRDKNTNVFKGDVENITDLDLSKERIEKDGLKAKLQLTGDNIVDLE 829
Query: 220 ----LSN-TRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
SN T + G GIL G + L L L+G ++D ++ Y+ + SL+++ +
Sbjct: 830 GIQYFSNLTSINLKGEGILKGIKNLMPIKTLVKLDLAGREVD--SLDYIKYLKSLEYLYL 887
Query: 270 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
+NT + G L L++L +L+ L+L +SD ++ L KEL L L
Sbjct: 888 NNTKLSG-------------GLLFLEDLTNLKALDLSDNNISDISI--LKGLKELNKLYL 932
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAV 357
+ D LSSL LT L D V
Sbjct: 933 GKNKIID-----LSSLEGLTKLVTLDLV 955
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 215 LRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
++ LNL N S L G +L N+ L +S I D ISY+ + SL+ +++ N
Sbjct: 162 IKELNLHNKNIKS-----LKGIEYLKNISNLDISDNHITD--ISYLRGLDSLEKLNLYNN 214
Query: 273 DIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
DIK ++ + + V+ ++ L+NLN+LE L+L ++ + + L L
Sbjct: 215 DIKDISAVSNLPKLKYLNMAKNEVIDISYLKNLNYLEHLDLRDNKIEN--IDSLEGKISL 272
Query: 325 IHLSLRNASLTDVS 338
I+L + N ++ D S
Sbjct: 273 IYLFMSNNNIGDFS 286
>gi|290999054|ref|XP_002682095.1| predicted protein [Naegleria gruberi]
gi|284095721|gb|EFC49351.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 12 CVKVTDAGMKHLLSISTLEKLW---LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 68
CV G++ IS LEKL + + A+G ++S ++ L+ L++ +
Sbjct: 66 CVDFNGIGLEGANYISQLEKLESLSIRYNYIGAEGAKVISEMKTLTWLNVSSNRIGGEGA 125
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GVTKLPNISSLECLNL 125
+++ + +L YLD+ ++V + +L +L+ L++ G+ + ++ L L++
Sbjct: 126 KAISQMKQLTYLDIGDNKVGDEEVILLSELDQLTALSIDRINPDGINAISKMNKLVSLSI 185
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF-- 183
+NCT IL+ E + + +++L LD+ ++ +S
Sbjct: 186 NNCT---ILDECEELSKMKQLTL----------------------LDIKSNGISAKGVKQ 220
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L+ + L HL++SS+ GDD + ++ + L L +++ + S G+ L G L L IL
Sbjct: 221 LSGLSQLTHLNISSNAFGDDGAKSISEI-KQLTELFVNDCQISDDGMKSL-GDLNELTIL 278
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+S I D Y++ + L ++++N ++ + + N+N L L
Sbjct: 279 DISNNYITDEGSLYLTKLEKLTALEVNNNELS------------YQGVKHMINMNQLTAL 326
Query: 304 NLEQTQVSDATLFPLSTFKEL 324
++ Q + S FK+L
Sbjct: 327 SIRHNQFTFVQNEVFSQFKQL 347
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
+I A + E L++L+VS++ + ++QMK L +LD+ + +GD+ V +++
Sbjct: 95 YIGAEGAKVISEMKTLTWLNVSSNRIGGEGAKAISQMKQLTYLDIGDNKVGDEEVILLS- 153
Query: 211 VGANLRNLN-LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
L L LS R + G+ ++ + L LS++ I D +S M L +DI
Sbjct: 154 ---ELDQLTALSIDRINPDGINAIS-KMNKLVSLSINNCTILD-ECEELSKMKQLTLLDI 208
Query: 270 SNTDI--KGFIQQVGAE--TDLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFP 317
+ I KG Q G T L +S A + + L L + Q+SD +
Sbjct: 209 KSNGISAKGVKQLSGLSQLTHLNISSNAFGDDGAKSISEIKQLTELFVNDCQISDDGMKS 268
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L EL L + N +TD L+ L KLT L + + L+ G+
Sbjct: 269 LGDLNELTILDISNNYITDEGSLYLTKLEKLTALEVNNNELSYQGV 314
>gi|421610748|ref|ZP_16051914.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
gi|408498532|gb|EKK03025.1| leucine-rich repeat domain protein [Rhodopirellula baltica SH28]
Length = 341
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 131
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 132 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 191 EHLD 194
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA 301
Query: 363 LGSFKPPRSLKLL 375
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|291001373|ref|XP_002683253.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
gi|284096882|gb|EFC50509.1| hypothetical protein NAEGRDRAFT_45222 [Naegleria gruberi]
Length = 461
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 153/328 (46%), Gaps = 43/328 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-LQNLSVLDLG 59
+T L++L+++ C K+ + G++ + + L +L + TG+ A G+ L+++ L+NL+ L
Sbjct: 160 LTNLQKLNVNNC-KIGNLGVQFITQLGNLMELSVINTGMDAKGLNLIATRLKNLTKLQFN 218
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNI 117
G L +++ LT L + V +GA + L+ L+L G+ ++ +
Sbjct: 219 GTVQHVTSLSNMKQLTSLSMG--FDVDVDVKGAKAISEMNNLTNLSLNTNDEGLEEICKM 276
Query: 118 SSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ L L + + ++ L+ L K++L N+ E F L+S LD
Sbjct: 277 TQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNL------NDHEDFGNEGAKLISELD---- 326
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
Q+ +LE D+ G + + L +L +SN + GV L
Sbjct: 327 ---------QLTSLEINDIGIDKKGAKFITNLK----QLTSLTISNNPIFNEGVKYLT-E 372
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
LP L L+ T+ID+ + Y+S M +LK ++I + ++Q +G E S+ ++N
Sbjct: 373 LPQLTNLNARFTKIDNEGVKYLSEMANLKILNIK----RNYVQDLGVE-----SICGMKN 423
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKEL 324
L L+ +EQ ++S+ + L K+L
Sbjct: 424 LTELD---IEQNEISEEGVAKLKEMKQL 448
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 181 FC-FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
FC ++Q+ L+ L++++ IG+ V+ + +G NL L++ NT + G+ ++A L N
Sbjct: 153 FCQAISQLTNLQKLNVNNCKIGNLGVQFITQLG-NLMELSVINTGMDAKGLNLIATRLKN 211
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L L +GT ++S M + SL + D+KG A+ +N+
Sbjct: 212 LTKLQFNGTVQHVTSLSNMKQLTSLSMGFDVDVDVKG--------------AKAISEMNN 257
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
L L+L +D L + +L L + LT + L L L KL L++ D
Sbjct: 258 LTNLSL---NTNDEGLEEICKMTQLTSLKVCGFYLTTLGLKFLPRLKKLRKLNLND 310
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ + G+K+L + L L T + +G+ LS + NL +L++ V DL + S+ +
Sbjct: 362 IFNEGVKYLTELPQLTNLNARFTKIDNEGVKYLSEMANLKILNIKRNYVQDLGVESICGM 421
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
L LD+ +++S G A LK +L L A +K
Sbjct: 422 KNLTELDIEQNEISEEGVAKLKEMKQLKVLKKADQRASK 460
>gi|224007994|ref|XP_002292956.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
gi|220971082|gb|EED89417.1| hypothetical protein THAPSDRAFT_16210 [Thalassiosira pseudonana
CCMP1335]
Length = 301
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+K L L C VT AG++HL S++ LE L L + +G+ L L L LD+ V
Sbjct: 148 MKRLSLFYC-NVTSAGLRHLSSMTKLEVLNLDSREIGDEGLKHLRDLP-LQSLDVFSGRV 205
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNI 117
TDL ++++ L+ L+L G V + G L P L+ LNL+ G L +
Sbjct: 206 TDLGYGCIRLIKTLQSLELCGGGVGDIGCTHLATIPNLTSLNLSQNERITNRGAASLAAL 265
Query: 118 SSLECLNLSNCTI 130
S+L+ LNLSN +
Sbjct: 266 SNLKALNLSNTAV 278
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 34/249 (13%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL---QVLTKLEYLDL 82
I+ L+ L L +G+ + +A SL L L+L + D + L V+ + LDL
Sbjct: 70 INNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNVIPNITSLDL 129
Query: 83 WGSQVSNRG---AAVLKMFPRLS--FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN 137
+ +S+ G A K RLS + N+ G+ L +++ LE LNL DS G+
Sbjct: 130 ADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNL-----DSREIGD 184
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
E L + L + R + L C + +K L+ L+L
Sbjct: 185 EGLKHLRDLPLQSLDVFSGRV-----------------TDLGYGC-IRLIKTLQSLELCG 226
Query: 198 SMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
+GD +A + NL +LNLS N R ++ G LA L NL+ L+LS T + A+
Sbjct: 227 GGVGDIGCTHLATI-PNLTSLNLSQNERITNRGAASLAA-LSNLKALNLSNTAVTPDALR 284
Query: 257 YMSMMPSLK 265
Y S + LK
Sbjct: 285 YFSDLSKLK 293
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G + NL+ L L + + D +++ +P L+ +++ + + + A+ +++ ++T+L
Sbjct: 68 GKINNLKSLELCYSGVQDNHLAHFRSLPMLEELNLDSCHLGDWSIAHLADNNVIPNITSL 127
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+L +SD L ++ FK++ LSL ++T L LSS++KL L++
Sbjct: 128 ---------DLADADISDFGLSKIAQFKQMKRLSLFYCNVTSAGLRHLSSMTKLEVLNLD 178
Query: 355 DAVLTNSGLGSFK--PPRSLKLL 375
+ + GL + P +SL +
Sbjct: 179 SREIGDEGLKHLRDLPLQSLDVF 201
>gi|290991352|ref|XP_002678299.1| predicted protein [Naegleria gruberi]
gi|284091911|gb|EFC45555.1| predicted protein [Naegleria gruberi]
Length = 383
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 37/301 (12%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
L + +N+ LD G T L R ++ K E L+ +V + A++ P L L+
Sbjct: 14 LCTYRKNIIGLDFGN---TSLSYRDACLIAKFESLEELIGEVGDEMEALVDYLPNLKSLD 70
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
+ N+ + L N T SI N + L I E
Sbjct: 71 VGLVQEICYENVEYIS--ELQNLTTFSIRYSNIGRKHLQIIG----------------EM 112
Query: 166 SLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
S L+ L++S + ++ LT++ +L D S +GDD + + L+ LNLS+
Sbjct: 113 SQLTDLNISGNPINSLLPIRPLTRITSLSAAD--CSFLGDDGIYPIVNFKG-LQKLNLSS 169
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
+ G ++ PNL LSL+ T+I D AI +S M L ++D+ N ++
Sbjct: 170 NGITWEGCMFISEKFPNLSHLSLNETRICDGAIKRLSKMKQLTYLDVGNN------AKIT 223
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
E ++S NL +L LN+ V+D L +L L + + +TD +++
Sbjct: 224 MEGIKLIS----NNLTNLTHLNISSNNVTDEGLMMACDLPKLQELFVGHNQITDSGINEF 279
Query: 343 S 343
S
Sbjct: 280 S 280
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 29/287 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK LD+ ++ ++++ + L + + + + ++ + L+ L++ G P+
Sbjct: 66 LKSLDVGLVQEICYENVEYISELQNLTTFSIRYSNIGRKHLQIIGEMSQLTDLNISGNPI 125
Query: 64 TDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---------K 113
L+ +R L +T L D S + + G + F L LNL+ G+T K
Sbjct: 126 NSLLPIRPLTRITSLSAADC--SFLGDDGIYPIVNFKGLQKLNLSSNGITWEGCMFISEK 183
Query: 114 LPNISSLECLNLSNCTIDSILEGNENK-------APLAKISLAGTTFINEREAFLYIETS 166
PN+S L LN + +I ++ K AKI++ G I+ L T
Sbjct: 184 FPNLSHLS-LNETRICDGAIKRLSKMKQLTYLDVGNNAKITMEGIKLISNNLTNL---TH 239
Query: 167 L-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTR 224
L +S +V++ L C L + L+ L + + I D + E +G L+ L+LS
Sbjct: 240 LNISSNNVTDEGLMMACDLPK---LQELFVGHNQITDSGINEFSEKIGNKLKILSLSRNN 296
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM-MPSLKFIDIS 270
+S L L NL+ L L+G I D + + M L ++D+S
Sbjct: 297 ITSLCTQYLCTKLTNLKKLYLAGVSITDEDVKLICQCMKLLIYLDVS 343
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLS-SLQNLSVLDLG 59
+T + L + C + D G+ +++ L+KL LS G+T +G +S NLS L L
Sbjct: 134 LTRITSLSAADCSFLGDDGIYPIVNFKGLQKLNLSSNGITWEGCMFISEKFPNLSHLSLN 193
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVL-KMFPRLSFLNLAWTGVT 112
+ D ++ L + +L YLD+ ++++ G ++ L+ LN++ VT
Sbjct: 194 ETRICDGAIKRLSKMKQLTYLDVGNNAKITMEGIKLISNNLTNLTHLNISSNNVT 248
>gi|430741732|ref|YP_007200861.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
gi|430013452|gb|AGA25166.1| hypothetical protein Sinac_0756 [Singulisphaera acidiphila DSM
18658]
Length = 304
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLP 238
F L L+ L + ++ D + + + LR + + ++AG+ L G HL
Sbjct: 94 FTALGMFDQLQELTMVVGVMTDTGLAQLGGL-PRLRQVYCFKPKVTNAGLAHLKGATHLV 152
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+LE+L + +I D + +++ + +L+ +++S I G L
Sbjct: 153 SLELLRVP--EITDEGLVHLAGLTNLEKLNLSGARIAG------------------PGLP 192
Query: 299 HLERLNLEQTQV----SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
HL RL +T V +DA L L F L L L TD L +LS L LT L +
Sbjct: 193 HLARLGRLRTLVLGSTTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLE 252
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
LT + L +L+ LDL GG +++ AI +F + P++ +
Sbjct: 253 AGDLTEAVLIHVAGLPNLERLDL-GGAPVSQAAIEKFKRARPQVRI 297
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L L+L R ++TD G+ HL ++ LEKL LS + G+ L+ L L L LG
Sbjct: 149 THLVSLELLRVPEITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLARLGRLRTLVLG-- 206
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPN 116
TD L L T L+ L L + ++ G A L L+ L L +T+ +
Sbjct: 207 STTDAGLAQLGRFTNLKQLYLGTGKYTDAGLAELSKLRSLTELGLEAGDLTEAVLIHVAG 266
Query: 117 ISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGT 151
+ +LE L+L + + +E + P +I + G+
Sbjct: 267 LPNLERLDLGGAPVSQAAIEKFKRARPQVRILVNGS 302
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 62
L+EL + V +TD G+ L + L +++ + +T G+A L +L L+L +P
Sbjct: 103 LQELTMVVGV-MTDTGLAQLGGLPRLRQVYCFKPKVTNAGLAHLKGATHLVSLELLRVPE 161
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT---GVTKLPNISS 119
+TD L L LT LE L+L G++++ G L RL L L T G+ +L ++
Sbjct: 162 ITDEGLVHLAGLTNLEKLNLSGARIAGPGLPHLARLGRLRTLVLGSTTDAGLAQLGRFTN 221
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKIS 147
L+ L L G A LA++S
Sbjct: 222 LKQLYLGT--------GKYTDAGLAELS 241
>gi|157123338|ref|XP_001660123.1| leucine-rich transmembrane protein [Aedes aegypti]
gi|108884516|gb|EAT48741.1| AAEL000243-PA [Aedes aegypti]
Length = 999
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 153/367 (41%), Gaps = 50/367 (13%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
S+++ +WL L + L + L L L ++ + + L +L +LDL ++
Sbjct: 424 SSVQTIWLENNLLNSLDKDLFVDVVQLERLYLKNNSISSIESNAFNSLRRLRFLDLSYNR 483
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGN--EN 139
++N + K L L ++ + KLP ++ L L+LS+ + ILE N
Sbjct: 484 LTNLNEKLFKNMVELDELLISKNQIQKLPSNVFGSLQKLRVLDLSHNPL-GILESNVFHQ 542
Query: 140 KAPLAKISLAGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 198
++ I+L G E EAF ++ L L+L +
Sbjct: 543 NFSVSVINLKGCELTRIESEAF------------------------KGLQNLNELNLDDN 578
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
+ + ++ + ++LR L L++ F+ L LP+L++L L I D S
Sbjct: 579 RLRSEDIKQID--ASSLRTLRLASNNFTVVRENTLE-RLPSLQVLVLERCSIRDLPYSLF 635
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
S +L +D+S+ ++ +L NLN + L L+ ++D L
Sbjct: 636 SKNNNLVKLDLSHNFLR------------ILKRNIFNNLNVFKELRLQNNSINDFPHIAL 683
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN-SGLGSFKPPRSLKLLDL 377
S L L L N LT+V +L L L +L ++D +++ +G + P L ++DL
Sbjct: 684 SNISTLETLILSNNQLTNVDFFKLHGLPNLRHLDLQDNSISSLTGFNTAILPH-LDMIDL 742
Query: 378 HGGWLLT 384
G LL
Sbjct: 743 SGNLLLA 749
>gi|87306873|ref|ZP_01089019.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
gi|87290246|gb|EAQ82134.1| hypothetical protein DSM3645_00430 [Blastopirellula marina DSM
3645]
Length = 240
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 211 VGANLRN-LNLSNTRF----SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 265
VG N + + + TR+ + + I+ G LP+LE+L L G I A+ ++ +P L+
Sbjct: 68 VGRNSEDQIQVVATRYPLLLTDQELAIVDG-LPHLEVLDLRGAPITGQALVHLENLPKLR 126
Query: 266 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
+ + + I Q + T +L ++ L L L+L +T ++DA + PL+ +L
Sbjct: 127 ELYLGGSVITDVEQTLFRTTITDAALPSIAKLKTLRVLSLARTGITDAGIAPLAELPDLE 186
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
L L + +TD ++ L+ L L +L + + +T +G+ +
Sbjct: 187 DLFLVDVEVTDAAIEDLAKLKSLKHLYLHETPITAAGVKRLQ 228
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TDA + + + TL L L+ TG+T GIA L+ L +L L L + VTD + L L
Sbjct: 147 ITDAALPSIAKLKTLRVLSLARTGITDAGIAPLAELPDLEDLFLVDVEVTDAAIEDLAKL 206
Query: 75 TKLEYLDLWGSQVSNRGAAVLK 96
L++L L + ++ G L+
Sbjct: 207 KSLKHLYLHETPITAAGVKRLQ 228
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 39 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
LT +A++ L +L VLDL G P+T L L+ L KL L L GS +++ V +
Sbjct: 87 LTDQELAIVDGLPHLEVLDLRGAPITGQALVHLENLPKLRELYLGGSVITD----VEQTL 142
Query: 99 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
R + + A + KL +L L+L+ I + APLA++
Sbjct: 143 FRTTITDAALPSIAKL---KTLRVLSLARTGI-----TDAGIAPLAELP----------- 183
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
+E L ++V+++++ L ++K+L+HL L + I
Sbjct: 184 ---DLEDLFLVDVEVTDAAIED---LAKLKSLKHLYLHETPI 219
>gi|171913798|ref|ZP_02929268.1| hypothetical protein VspiD_21505 [Verrucomicrobium spinosum DSM
4136]
Length = 1196
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 16 TDAGMKHLLSI-STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+DA +K L SI S+L L L+ T +T G+A L+ + NL L L VTD SL+ L
Sbjct: 468 SDANLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGL 527
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
KLEYL+L+G++V+++ L+ L L L TGVT+
Sbjct: 528 AKLEYLNLYGTKVTDKILGDLEGLKALKALYLWQTGVTE 566
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
+ L LDL+R KVTDAG+ L ++ L++L L T +T + L L L L+L G
Sbjct: 480 SSLVALDLART-KVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKLEYLNLYGT 538
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 109
VTD +L L+ L L+ L LW + V+ A + +N+ WT
Sbjct: 539 KVTDKILGDLEGLKALKALYLWQTGVTEPAAEAFRAKRPGLLVNIGWT 586
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
+DL+R KVTD+G+ + ++ LE+L L T +T G+ L+ L L L+L G VTD
Sbjct: 997 VDLART-KVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTDA 1055
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
L L L+ L +W + + GA L+
Sbjct: 1056 GLAKLAAAKSLKKLFVWQTGATREGAKKLE 1085
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 32 LW--LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN 89
+W L+ T +T G+A+++ + NL L L +TD L L L KLEYL+L+G++V++
Sbjct: 995 IWVDLARTKVTDSGLAMVAGMTNLERLHLENTAITDAGLDHLAKLGKLEYLNLYGTKVTD 1054
Query: 90 RGAAVLKMFPRLSFLNLAWTGVTK 113
G A L L L + TG T+
Sbjct: 1055 AGLAKLAAAKSLKKLFVWQTGATR 1078
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 296 NLNHLER-------LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
NL LE L+L +T+V+DA L L+ L L L N ++TD + L L+KL
Sbjct: 471 NLKELESIGSSLVALDLARTKVTDAGLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKL 530
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV---WHE 403
L++ +T+ LG + ++LK L L W +TE A F P + V W E
Sbjct: 531 EYLNLYGTKVTDKILGDLEGLKALKALYL---WQTGVTEPAAEAFRAKRPGLLVNIGWTE 587
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
L AL + +L+ L+LE T V+DA L +L +L+L +TD L L L L
Sbjct: 496 GLAALAKMTNLKELHLENTAVTDAAGSSLKGLAKLEYLNLYGTKVTDKILGDLEGLKALK 555
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 381
L + +T +F+ R L+++ GW
Sbjct: 556 ALYLWQTGVTEPAAEAFRAKRPGLLVNI--GW 585
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
++ GD + ++A V +L ++L+ T+ + +G+ ++AG + NLE L L T I D +
Sbjct: 975 AADKFGDKELALLAPVNPHLIWVDLARTKVTDSGLAMVAG-MTNLERLHLENTAITDAGL 1033
Query: 256 SYMSMMPSLKFIDISNTDI 274
+++ + L+++++ T +
Sbjct: 1034 DHLAKLGKLEYLNLYGTKV 1052
>gi|391340788|ref|XP_003744718.1| PREDICTED: chaoptin-like [Metaseiulus occidentalis]
Length = 1224
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 177/401 (44%), Gaps = 41/401 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK LDL ++ + +L S++++L S T ++ D I + + + LS
Sbjct: 479 LTTLKRLDL----RLNPRLREDVLIGSSIQELDFSFTKISTDFI--IPTARRLSKYSFQL 532
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS-- 118
P L Q L +DL S +S G+ L P L F++L+ + L ++
Sbjct: 533 FPSESLRSLFAQNFPDLTTIDLRYSAISRVGSNALYYLPNLEFVHLSHCRIDTLDEVAFN 592
Query: 119 ---SLECLNLS-----NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+L+ L+LS N ++ S + ++ + + L+ + R ++E ++
Sbjct: 593 RLPALQLLDLSHNRLRNLSLSSFCQLSDFDIVPSTVDLSHNQIKSLRAQDDHLEYECQNY 652
Query: 171 LDVSN------SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
+ V N S + FLT L LDLS +++GD ++ + R LNLS+ R
Sbjct: 653 ITVLNLKHNHISDIDFDAFLTVKNTLLELDLSHNLLGDQQLKKFIDLKRVSR-LNLSHNR 711
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
+ + G L NL+ L LS I S ++ +P L+ +D+S+ +I
Sbjct: 712 LAMLPRRAMTG-LFNLQELDLSSNLIQQITPSALASLPKLRAVDLSSNNIS--------- 761
Query: 285 TDLVLSLTALQNLNHLERLNLEQTQV---SDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
+ + A N +E LNLE+ Q+ +A + + ++LS N + ++ +
Sbjct: 762 ---FIPIDAF-NGTSIEVLNLERNQLPSLKNAAFRSIGSNLTELYLS-HNDDMHALTNGE 816
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
+ L++L +LSI + + GSF L LD+ WL
Sbjct: 817 FAYLTQLLHLSISNCGIKTITPGSFNDLSLLISLDISNNWL 857
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 42/328 (12%)
Query: 60 GLPVTDLVLRSLQVL-------TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
GL V D+ S+++L T L LD+ + + GA+ K L NLA ++
Sbjct: 388 GLKVLDVSKNSIRLLSEDSFPFTNLHTLDISDNAMLTIGASPFKYLVNLKDFNLAHNRLS 447
Query: 113 KLPN-----ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 167
+P + S+E LN +++ LEG N A L + +N R + S
Sbjct: 448 TIPADLIDLLRSVEYLN----AMNNALEGFINLANLTTLKRLDLR-LNPRLREDVLIGSS 502
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE-MVACVGANLRNLNLSNTRFS 226
+ LD S + +S + + L S + +S+ + A +L ++L + S
Sbjct: 503 IQELDFSFTKISTDFIIPTARRLSKY--SFQLFPSESLRSLFAQNFPDLTTIDLRYSAIS 560
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-----NTDIKGFIQQ- 280
G L +LPNLE + LS +ID + +P+L+ +D+S N + F Q
Sbjct: 561 RVGSNALY-YLPNLEFVHLSHCRIDTLDEVAFNRLPALQLLDLSHNRLRNLSLSSFCQLS 619
Query: 281 ----VGAETDL----VLSLTA------LQNLNHLERLNLEQTQVSDATLFPLSTFKE-LI 325
V + DL + SL A + N++ LNL+ +SD T K L+
Sbjct: 620 DFDIVPSTVDLSHNQIKSLRAQDDHLEYECQNYITVLNLKHNHISDIDFDAFLTVKNTLL 679
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L + L D L + L +++ L++
Sbjct: 680 ELDLSHNLLGDQQLKKFIDLKRVSRLNL 707
>gi|153940509|ref|YP_001391037.1| hypothetical protein CLI_1777 [Clostridium botulinum F str.
Langeland]
gi|384462076|ref|YP_005674671.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
gi|152936405|gb|ABS41903.1| leucine rich repeat protein [Clostridium botulinum F str.
Langeland]
gi|295319093|gb|ADF99470.1| leucine rich repeat protein [Clostridium botulinum F str. 230613]
Length = 1359
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 184/410 (44%), Gaps = 71/410 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 124 NLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LSNC T ++ L N + L+ I + G +NE + L +L ++N+++
Sbjct: 468 DLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSIANTNV 524
Query: 179 SRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRNLNLSN 222
+ L + L LD++ +IG++ V V +R L
Sbjct: 525 VKIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIREL---- 580
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 280
++ I L ++ L LSG I D + + M +L ++D+SN +I I++
Sbjct: 581 --INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNIDSIKK 636
Query: 281 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNAS 333
+ LVL S+ +++L LE L+L + D T L +L L L RN
Sbjct: 637 LINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI 694
Query: 334 LTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 366
++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 695 VSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGISNF 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 59/366 (16%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLINL 706
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 133
+YL L+ +++S R ++ K++ L L L +G++ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISEREESLKKLY-NLRELYLKNSGISNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 134 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 765 VFDEKLDSDLAKIIREILGK---DENTNIYKSEIDTITDIDLSEDAISKLNISSKL---- 817
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 246
++++I D ++ + NL ++NL G G L G L L L L
Sbjct: 818 ---TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLDLQ 863
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+L
Sbjct: 864 GREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLDLS 910
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
+T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ + S
Sbjct: 911 RTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDITSI 962
Query: 367 KPPRSL 372
R+L
Sbjct: 963 YALRNL 968
>gi|440712554|ref|ZP_20893170.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
gi|436442709|gb|ELP35820.1| hypothetical protein RBSWK_00227 [Rhodopirellula baltica SWK14]
Length = 341
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMNSPVTDKTLASISTLPK 190
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 131
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 132 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 191 EHLD 194
+ L+
Sbjct: 309 QELE 312
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMNSPVTDKTLASISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++ + AL + + + DD ++A + L++++L N+ + + ++ LP L L
Sbjct: 137 ISGLPALVAVTFQDTSVTDDGASVLAELN-ELQDVSLMNSPVTDKTLASIS-TLPKLTKL 194
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LESLELAETDF-------GPE-----GMPAIANIEGLEKI 241
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
NL T++ + +L L L++ N ++T+ ++ + SL L L + ++
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA 301
Query: 363 LGSFKPPRSLKLL 375
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|46447548|ref|YP_008913.1| hypothetical protein pc1914 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401189|emb|CAF24638.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 528
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+LSRC K+TDAG+ HL ++ L+ L LSE LT G+A L+ L L LDL
Sbjct: 418 LTGLQHLNLSRCYKLTDAGLAHLTTLVALQHLNLSECRHLTDAGLAHLTPLTALQHLDLK 477
Query: 60 -GLPVTDLVLRSLQVLTKLEYLDL 82
+ +TD L L LT L++LDL
Sbjct: 478 YCINLTDAGLAHLTPLTALQHLDL 501
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GL 61
L+ LDLS C +TDAG+ HL ++ L+ L LS LT G+A L+ L L LDL
Sbjct: 296 LQHLDLSYCENLTDAGLAHLTPLTALQHLGLSCCENLTDAGLAHLALLTTLQHLDLSCCY 355
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFL------NLAWTGVTKL 114
+TD L L LT L++L L G + +++ G A L L L NL G++ L
Sbjct: 356 NLTDASLSHLTPLTALQHLYLIGCENLTDAGLAHLTPLTALQHLDLSCCFNLTDAGLSHL 415
Query: 115 PNISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
++ L+ LNLS C D+ L L ++L+ + + + L LD
Sbjct: 416 TPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQHLNLSECRHLTDAGLAHLTPLTALQHLD 475
Query: 173 VS---NSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANL 215
+ N + + LT + AL+HLDLS + DD ++ + +L
Sbjct: 476 LKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRFKTLATSL 522
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 161/376 (42%), Gaps = 69/376 (18%)
Query: 29 LEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDL-WGS 85
+E L SE T LT + L +N+ VL VTD L L L L++LDL +
Sbjct: 196 IEVLNFSENTHLTNAHLLALKDCKNIEVLYFKKCRGVTDAGLAHLVPLKGLQHLDLSYCE 255
Query: 86 QVSNRGAAVLKMFPRLSFLNLA--W----TGVTKLPNISSLECLNLSNCTIDSILEGNEN 139
+++ G A LK L LNL+ W G+ L + L+ L+LS C N
Sbjct: 256 NLTDAGLAYLKPLTALQHLNLSGCWNLTDAGLVHLTPLVGLQHLDLSYCE-------NLT 308
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
A LA LT + AL+HL LS
Sbjct: 309 DAGLAH--------------------------------------LTPLTALQHLGLSCCE 330
Query: 200 IGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISY 257
D+ + L++L+LS + A + L L L+ L L G + + D +++
Sbjct: 331 NLTDAGLAHLALLTTLQHLDLSCCYNLTDASLSHLTP-LTALQHLYLIGCENLTDAGLAH 389
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
++ + +L+ +D+S A + LT LQ+LN L R +++DA L
Sbjct: 390 LTPLTALQHLDLSCC-----FNLTDAGLSHLTPLTGLQHLN-LSRC----YKLTDAGLAH 439
Query: 318 LSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV-LTNSGLGSFKPPRSLKLL 375
L+T L HL+L LTD L L+ L+ L +L ++ + LT++GL P +L+ L
Sbjct: 440 LTTLVALQHLNLSECRHLTDAGLAHLTPLTALQHLDLKYCINLTDAGLAHLTPLTALQHL 499
Query: 376 DLHGGWLLTEDAILQF 391
DL LT+D + +F
Sbjct: 500 DLSRCRRLTDDGLDRF 515
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 37/303 (12%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGGL-PVT 64
L +C VTDAG+ HL+ + L+ L LS LT G+A L L L L+L G +T
Sbjct: 224 LYFKKCRGVTDAGLAHLVPLKGLQHLDLSYCENLTDAGLAYLKPLTALQHLNLSGCWNLT 283
Query: 65 DLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFL------NLAWTGVTKLPNI 117
D L L L L++LDL + +++ G A L L L NL G+ L +
Sbjct: 284 DAGLVHLTPLVGLQHLDLSYCENLTDAGLAHLTPLTALQHLGLSCCENLTDAGLAHLALL 343
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
++L+ L+LS C L SL+ T + + I +++++
Sbjct: 344 TTLQHLDLSCC------------YNLTDASLSHLTPLTALQHLYLIGCE-----NLTDAG 386
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGH 236
L+ LT + AL+HLDLS D+ L++LNLS + + AG+ L
Sbjct: 387 LAH---LTPLTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTT- 442
Query: 237 LPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQ 295
L L+ L+LS + + D +++++ + +L+ + D+K I A + LTALQ
Sbjct: 443 LVALQHLNLSECRHLTDAGLAHLTPLTALQHL-----DLKYCINLTDAGLAHLTPLTALQ 497
Query: 296 NLN 298
+L+
Sbjct: 498 HLD 500
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 20/130 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C +TDAG+ HL ++ L+ L LS LT G+A L++L L L+L
Sbjct: 393 LTALQHLDLSCCFNLTDAGLSHLTPLTGLQHLNLSRCYKLTDAGLAHLTTLVALQHLNLS 452
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
+TD L L LT L++LDL +NL G+ L ++
Sbjct: 453 ECRHLTDAGLAHLTPLTALQHLDLKYC------------------INLTDAGLAHLTPLT 494
Query: 119 SLECLNLSNC 128
+L+ L+LS C
Sbjct: 495 ALQHLDLSRC 504
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSL 50
+T L+ LDL C+ +TDAG+ HL ++ L+ L LS LT DG+ +L
Sbjct: 468 LTALQHLDLKYCINLTDAGLAHLTPLTALQHLDLSRCRRLTDDGLDRFKTL 518
>gi|290983152|ref|XP_002674293.1| predicted protein [Naegleria gruberi]
gi|284087882|gb|EFC41549.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S+ + F+T+MK L LD+S++ IGD+ V+ ++ + L +L + N GV +
Sbjct: 123 SIEKPTFITEMKQLTSLDISNNRIGDEGVKFISEM-KQLISLGIYNNGIGDEGVKSII-E 180
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L L + G QI D +S M L +DI+N Q G E + +
Sbjct: 181 MKRLTSLGIGGNQIGDEGAKSISEMKQLTSLDINNN-------QTGDE-----GVKFICE 228
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L L + ++ D +S K+L L++ + D +S L +LT+L I
Sbjct: 229 MKQLTSLTIYNNRIGDEGAKSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYN 288
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+ + + LK LD+ G + E
Sbjct: 289 RIGDKEAKFICEMKQLKSLDIGGNQIGDE 317
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S ++ D G+K + + L L + G+ +G+ + ++ L+ L +GG
Sbjct: 133 MKQLTSLDISNN-RIGDEGVKFISEMKQLISLGIYNNGIGDEGVKSIIEMKRLTSLGIGG 191
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV---LKMFPRLSFLN--LAWTGVTKLP 115
+ D +S+ + +L LD+ +Q + G +K L+ N + G +
Sbjct: 192 NQIGDEGAKSISEMKQLTSLDINNNQTGDEGVKFICEMKQLTSLTIYNNRIGDEGAKSIS 251
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L LN+S EN +I G FI+E + L+ LD+
Sbjct: 252 EMKQLTSLNIS-----------EN-----RIGDEGAIFISELKQ--------LTSLDICY 287
Query: 176 SSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
+ + F+ +MK L+ LD+ + IGD+ V+ ++
Sbjct: 288 NRIGDKEAKFICEMKQLKSLDIGGNQIGDEGVKFIS 323
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G K + + L L +SE + +G +S L+ L+ LD+ + D + +
Sbjct: 241 RIGDEGAKSISEMKQLTSLNISENRIGDEGAIFISELKQLTSLDICYNRIGDKEAKFICE 300
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
+ +L+ LD+ G+Q+ + G + RL+ L++
Sbjct: 301 MKQLKSLDIGGNQIGDEGVKFISEMTRLTSLDI 333
>gi|254933382|ref|ZP_05266741.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|405748685|ref|YP_006672151.1| internalin I [Listeria monocytogenes ATCC 19117]
gi|424822071|ref|ZP_18247084.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|293584944|gb|EFF96976.1| cell wall surface anchor family protein [Listeria monocytogenes
HPB2262]
gi|332310751|gb|EGJ23846.1| Internalin-I [Listeria monocytogenes str. Scott A]
gi|404217885|emb|CBY69249.1| internalin I (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 1775
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 171/375 (45%), Gaps = 59/375 (15%)
Query: 8 DLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV 67
DL+ VTD + L+ L L G+T+ I L +L L LDL +T +
Sbjct: 398 DLTNINAVTD--------MPQLKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI- 446
Query: 68 LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLN 124
+ L +L YLD+ + ++ G LK P L +LN++ + V+ L N SL +N
Sbjct: 447 -SEINDLPRLSYLDVSVNYLTTIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYIN 503
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFL 184
+SN I ++ G + P K A I++ + + L +D SN+ ++
Sbjct: 504 VSNNVIRTV--GKMTELPSLKEFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTF 559
Query: 185 TQMKALEHLDLSSSMIGDDSV--------------EMVACVGA--NLRNLNLSNTRFSSA 228
+ L++LD+ S+ I + SV ++ +G NL L + F+
Sbjct: 560 DNLPKLQNLDVHSNRITNTSVIHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRI 619
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
G LP LEIL ++ D+Y+ + M + L+ +++ N ++ G E
Sbjct: 620 PSLAPIGDLPKLEILKVT----DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTE 671
Query: 285 TDLVLSLTALQNLNHLERLNL-EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQL 342
+L +AL +L +L LNL + +SD + LST LI+L+L + + D+S L L
Sbjct: 672 GNL----SALSDLTNLTELNLRDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNL 725
Query: 343 SSLSKLT--NLSIRD 355
++L +LT N I D
Sbjct: 726 TTLQELTLENNQIED 740
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ AV M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAVTDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|319881515|gb|ADV75084.1| TLR2B [Amazona albifrons]
Length = 397
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 166 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 221
SLL+ + V N+ + C L+Q +++LE+LDLSS+++GD S+E AC GA +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCSLSQHLRSLEYLDLSSNLLGDQSLEHSACQGAWPSLQTLNLS 156
Query: 222 NTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 279
S + G HL NL +L +S + I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTGKSLSHLRNLSLLDISQNNFGE--IPDVCEWPKNLKYLNVSSTHIPKLTT 214
Query: 280 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
+ + VL ++A LQ L L+ L L + Q+ TL + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPFLKELYLTKNQLK--TLPGAAPIPNLVAMSVRRN 270
Query: 333 SLTDVSLHQLSSLSKLTNLSIRD 355
L S + S K+ L D
Sbjct: 271 KLNSFSREEFESFKKMELLDASD 293
>gi|290972682|ref|XP_002669080.1| predicted protein [Naegleria gruberi]
gi|284082622|gb|EFC36336.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+++ MK + +S L KL + + +GI + +L L+ L++ +T ++ +
Sbjct: 80 EISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCLNIINANITSEGVKLIGK 139
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 128
L+ L LD+ G+ + G + L L L G + ++ L L C
Sbjct: 140 LSNLTILDISGNLIGAEGGQYIGELNNLKILVASDNELGVFGAKSIGEMNQLTSL----C 195
Query: 129 TIDSILEGNENKAPLAKISL-----AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
I + + GNE +++++ G I L + L+ LD+ ++++S
Sbjct: 196 LIGNSI-GNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSS 254
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ Q+ L LD+ + I D + + +G L L L +S G IL+ + L L
Sbjct: 255 IGQLGLLNCLDVRKNKIEDTGIRNICQLGG-LNALRLCGNPITSEGAKILS-EMVQLTNL 312
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNLNH 299
S+S T IDD +++ + +LK++DIS I FI Q L+
Sbjct: 313 SISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQ----------------LSK 356
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L++ + D + +S ++L L NA ++ L LS++ L++ D
Sbjct: 357 LISLDINWNNIGDEGVLYISRMQQLETL---NAVYCNIGLEGAKLLSEMEQLTVLDV 410
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R K+ D G++++ + L L L +T++G +LS + L+ L + + D +
Sbjct: 267 RKNKIEDTGIRNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNLSISETHIDDEGAKF 326
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
+ LT L+YLD+ +++ G + +L L++ W GV + + LE LN
Sbjct: 327 IAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGDEGVLYISRMQQLETLNA 386
Query: 126 SNCTIDSILEG 136
C I LEG
Sbjct: 387 VYCNIG--LEG 395
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 165/415 (39%), Gaps = 78/415 (18%)
Query: 9 LSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+S K+ +GMKHL ++ + I S L L+ L++ + D +
Sbjct: 14 ISEKSKIILSGMKHLKILAA-----------SGSEIDKFSRLDQLTELNVNWNRLKDEDV 62
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECL 123
+S+ L L L+L G+++S + L+ L++ G+ + N+S L CL
Sbjct: 63 KSIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNSIENEGINSIINLSKLTCL 122
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
N+ N I S EG + L G
Sbjct: 123 NIINANITS--EG---------VKLIG--------------------------------- 138
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++ L LD+S ++IG + + + + NL+ L S+ G + G + L L
Sbjct: 139 --KLSNLTILDISGNLIGAEGGQYIGELN-NLKILVASDNELGVFGAKSI-GEMNQLTSL 194
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGF--IQQVGAETDL------VLSLTA 293
L G I + Y+S + L +D+ +I +GF + ++ T+L + L++
Sbjct: 195 CLIGNSIGNEGAKYISQLTQLTDLDLGRNEIGNEGFKLLTKLEKLTNLDMVSNNISDLSS 254
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ L L L++ + ++ D + + L L L +T LS + +LTNLSI
Sbjct: 255 IGQLGLLNCLDVRKNKIEDTGIRNICQLGGLNALRLCGNPITSEGAKILSEMVQLTNLSI 314
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEV---WHELS 405
+ + + G +LK LD+ +T + + C++ I + W+ +
Sbjct: 315 SETHIDDEGAKFIAQLTTLKYLDISTKR-ITANGVKFICQLSKLISLDINWNNIG 368
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 18/174 (10%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL LN+ + S IL+G + +L+IL+ SG++ID ++ ++ + + + D
Sbjct: 3 NLTYLNIDWNKISEKSKIILSG-MKHLKILAASGSEIDKFSRLDQLTELNVNWNRLKDED 61
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+K ++ NL +L L L ++S ++ +S EL LS+ S
Sbjct: 62 VK-----------------SIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ + ++ + +LSKLT L+I +A +T+ G+ +L +LD+ G + E
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGG 158
>gi|290997297|ref|XP_002681218.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
gi|284094841|gb|EFC48474.1| leucine-rich repeat ribonuclease inhibitor family protein
[Naegleria gruberi]
Length = 342
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R ++ D G K++ + L L + E + +G +S ++ L+ LD+ G + D +
Sbjct: 136 RGNRIGDEGAKYISEMKQLTSLNIRENEIGDEGAKFISEMKQLTSLDIRGNRIGDEGAKY 195
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
+ + +L L+++ + + GA + +L+ LN+ + G + + L L++
Sbjct: 196 ISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGAKFISEMKQLTLLDI 255
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFL 184
SN NE I + G FI+E + TSL +++ ++ + F+
Sbjct: 256 SN---------NE-------IGIEGAKFISEMKQL----TSLNINYNEIGDRGAK---FI 292
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
++MK L L++S ++ GD + ++ + L +L++SN R G
Sbjct: 293 SEMKQLTSLNISYNITGDRGAKFISEM-KQLTSLDISNNRICDEG 336
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F+++MK L LD+ + IGD+ + ++ + L +LN+ T G ++ + L +
Sbjct: 171 FISEMKQLTSLDIRGNRIGDEGAKYISEM-KQLTSLNIYYTLIGIEGAKFIS-EMKQLTL 228
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L++ I ++S M L +DISN +I G E +S + L
Sbjct: 229 LNIYYNLIGIEGAKFISEMKQLTLLDISNNEI-------GIEGAKFIS-----EMKQLTS 276
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LN+ ++ D +S K+L L++ D +S + +LT+L I + + + G
Sbjct: 277 LNINYNEIGDRGAKFISEMKQLTSLNISYNITGDRGAKFISEMKQLTSLDISNNRICDEG 336
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+T+MK L L++ + IGD+ + ++ + L +LN+ G ++ + L L
Sbjct: 124 VTEMKQLTSLNIRGNRIGDEGAKYISEM-KQLTSLNIRENEIGDEGAKFIS-EMKQLTSL 181
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAET--DLVLSLTALQ-- 295
+ G +I D Y+S M L ++I T I+G FI ++ T ++ +L ++
Sbjct: 182 DIRGNRIGDEGAKYISEMKQLTSLNIYYTLIGIEGAKFISEMKQLTLLNIYYNLIGIEGA 241
Query: 296 ----NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L L++ ++ +S K+L L++ + D +S + +LT+L
Sbjct: 242 KFISEMKQLTLLDISNNEIGIEGAKFISEMKQLTSLNINYNEIGDRGAKFISEMKQLTSL 301
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+I + + G + L LD+ + E A
Sbjct: 302 NISYNITGDRGAKFISEMKQLTSLDISNNRICDEGA 337
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 43/362 (11%)
Query: 43 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 102
I LS+L NL+ LDL ++D+ + L LT L +DL +Q+S VL L+
Sbjct: 85 DIKPLSNLTNLTTLDLSENQISDI--KPLSNLTNLTDIDLSSNQIS--DIKVLSNLTNLT 140
Query: 103 FLNLAWTGVTK---LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
++L+ ++ L N+++L L+LS+ I I + N L + L+ I++ E
Sbjct: 141 DIDLSKNQISDIKVLSNLTNLTVLDLSDNQISDI-KVLSNLTNLTSVKLSENQ-ISDIEV 198
Query: 160 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
+ L+ LD+ + +S L+ + L +L L ++ IGD +++++ + NL +L+
Sbjct: 199 LSNLTN--LTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGD--IKVLSNL-TNLTSLS 253
Query: 220 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGFI 278
L + + S +L NL L L QI D +S ++ + L D DIK +
Sbjct: 254 LWDNQISDIKP---LSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQIADIKP-L 309
Query: 279 QQVGAETDLVLS------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RN 331
+ TDL LS + L NL L L+L + Q++D + PLS L LSL RN
Sbjct: 310 SNLTNLTDLDLSKNQIGDIKPLSNLTSLTSLDLSKNQIAD--IKPLSNLTNLTSLSLWRN 367
Query: 332 ASLT-------------DVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFKPPRSL-KLLD 376
S+ D+S +Q+S + L+NL+ + D L+ + + KP +L KL D
Sbjct: 368 QSIDIELLSNLTNLTSLDLSENQISDIKPLSNLTNLTDIDLSENQISDIKPLSNLTKLED 427
Query: 377 LH 378
L
Sbjct: 428 LQ 429
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 163/337 (48%), Gaps = 58/337 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L LDLS +++D +K L +++ L + LSE ++ I +LS+L NL+VLDLG
Sbjct: 158 LTNLTVLDLSDN-QISD--IKVLSNLTNLTSVKLSENQIS--DIEVLSNLTNLTVLDLGY 212
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
++D ++ L LT L YL LW +Q+ + + + L LS + + + L N+++
Sbjct: 213 NQISD--IKVLSNLTNLTYLSLWNNQIGDIKVLSNLTNLTSLSLWDNQISDIKPLSNLTN 270
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L L L + I I PL+ + + L++L + ++ ++
Sbjct: 271 LTSLYLWDNQISDI-------KPLSNL-------------------TNLTYLYLWDNQIA 304
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
L+ + L LDLS + IGD ++ ++ + + L +L+LS + A + L+ +L N
Sbjct: 305 DIKPLSNLTNLTDLDLSKNQIGD--IKPLSNLTS-LTSLDLSKNQI--ADIKPLS-NLTN 358
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LSL Q D I +S + +L +D+S I + L NL +
Sbjct: 359 LTSLSLWRNQSID--IELLSNLTNLTSLDLSENQISD--------------IKPLSNLTN 402
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L ++L + Q+SD + PLS +L L ++N + D
Sbjct: 403 LTDIDLSENQISD--IKPLSNLTKLEDLQIQNNPILD 437
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L ++DLS +++D +K L +++ L + LS+ ++ I +LS+L NL+VLDL
Sbjct: 114 LTNLTDIDLSSN-QISD--IKVLSNLTNLTDIDLSKNQIS--DIKVLSNLTNLTVLDLSD 168
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNI 117
++D ++ L LT L + L +Q+S VL L+ L+L + ++ L N+
Sbjct: 169 NQISD--IKVLSNLTNLTSVKLSENQIS--DIEVLSNLTNLTVLDLGYNQISDIKVLSNL 224
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
++L L+L N I I + N L +SL
Sbjct: 225 TNLTYLSLWNNQIGDI-KVLSNLTNLTSLSLWDNQ------------------------- 258
Query: 178 LSRFCFLTQMKALEHL-DLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILA 234
++ +K L +L +L+S + D+ + + + NL L L + + A + L+
Sbjct: 259 ------ISDIKPLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQI--ADIKPLS 310
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV------ 288
+L NL L LS QI D I +S + SL +D+S I I+ + T+L
Sbjct: 311 -NLTNLTDLDLSKNQIGD--IKPLSNLTSLTSLDLSKNQIAD-IKPLSNLTNLTSLSLWR 366
Query: 289 ---LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+ + L NL +L L+L + Q+SD + PLS L + L ++D+ LS+L
Sbjct: 367 NQSIDIELLSNLTNLTSLDLSENQISD--IKPLSNLTNLTDIDLSENQISDI--KPLSNL 422
Query: 346 SKLTNLSIRD 355
+KL +L I++
Sbjct: 423 TKLEDLQIQN 432
>gi|254854582|ref|ZP_05243930.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300766483|ref|ZP_07076434.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404279887|ref|YP_006680785.1| internalin I [Listeria monocytogenes SLCC2755]
gi|404285703|ref|YP_006692289.1| internalin I [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258607981|gb|EEW20589.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
R2-503]
gi|300512809|gb|EFK39905.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
N1-017]
gi|404226522|emb|CBY47927.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244632|emb|CBY02857.1| internalin I (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 1775
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|307108381|gb|EFN56621.1| hypothetical protein CHLNCDRAFT_57520 [Chlorella variabilis]
Length = 790
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 187/437 (42%), Gaps = 76/437 (17%)
Query: 4 LKELDLSRCVKVTD--AGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLGG 60
L+ LD++ C VTD G L + L +L L L DG+ LL +L++L+ L+L
Sbjct: 352 LRALDMAGCTGVTDEGTGFTQLSRLQQLSELNLKGCYSLADDGLELLPTLRSLAALNLQE 411
Query: 61 L-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV----LKMFPRLSFL------NLAWT 109
VTD L L LT+LE L+L G + GA L RL+ L LA
Sbjct: 412 CWQVTDRGLAHLSGLTRLEDLNLQGCRNLANGAGQSLSGLGALHRLTSLCMRGCDRLADG 471
Query: 110 GVTKLPNISSLECLNLSNC---TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
+ LP ++SL L+LS C T D + APL+ + L
Sbjct: 472 ALDFLPGLTSLRQLDLSGCKELTADGL-------APLSSLRL------------------ 506
Query: 167 LLSFLDVSNSSLSRFCF----LTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLS 221
L+ L + + S R L+ + +L L+L + I S+ + + A LR L+L
Sbjct: 507 -LACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALGTLSA-LRQLSLE 564
Query: 222 NTR---FSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
R AG+ LA L L L+L G + + D + M + L +++S
Sbjct: 565 GCRGVVLLDAGLEALAPSLHRLTSLNLQGCSTLTDAGLQKMGPLTGLVSLNLSECP---S 621
Query: 278 IQQVGAETDLVLSLTALQNLNH----------------LERLNLEQTQ-VSDATLFPLS- 319
I GA + L +LQ N L LNL+Q + V D L ++
Sbjct: 622 ITGAGAAAWRMPLLASLQLQNSPGVDDAGLAALAGLTALRSLNLKQCKRVGDGGLAAMAP 681
Query: 320 TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKLLDL 377
+ L L L+ S +TD + QL +L L +L ++ A ++G+ + +L LDL
Sbjct: 682 ALQRLTALCLQGMSEVTDAGVAQLGALRSLQDLELQFAWQFGDAGIAALTRLSALSRLDL 741
Query: 378 HGGWLLTEDAILQFCKM 394
W +T+D++ +M
Sbjct: 742 MYSWKITDDSLRSLGRM 758
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 59/338 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGL-TADGIALLSSLQNLSVLDL 58
+T L++LDLS C ++T G+ L S+ L L L +GL A + LS+L +L+ L+L
Sbjct: 479 LTSLRQLDLSGCKELTADGLAPLSSLRLLACLRLQHCSGLRGAAALRPLSTLSSLTALNL 538
Query: 59 GGL-PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL-PN 116
GG + LR+L L+ L L L G RG +L G+ L P+
Sbjct: 539 GGCTAIHGQSLRALGTLSALRQLSLEGC----RGVVLLD------------AGLEALAPS 582
Query: 117 ISSLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ L LNL C+ D+ L+ L ++L+ I A +
Sbjct: 583 LHRLTSLNLQGCSTLTDAGLQKMGPLTGLVSLNLSECPSITGAGAAAW------------ 630
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGIL 233
+M L L L +S DD+ LR+LNL R G+ +
Sbjct: 631 -----------RMPLLASLQLQNSPGVDDAGLAALAGLTALRSLNLKQCKRVGDGGLAAM 679
Query: 234 AGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
A L L L L G +++ D ++ + + SL+ +++ F Q G +
Sbjct: 680 APALQRLTALCLQGMSEVTDAGVAQLGALRSLQDLELQ------FAWQFGDA-----GIA 728
Query: 293 ALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSL 329
AL L+ L RL+L + +++D +L L L+ L++
Sbjct: 729 ALTRLSALSRLDLMYSWKITDDSLRSLGRMTSLLSLNV 766
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 178/453 (39%), Gaps = 66/453 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLE--KLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
L L L CVK+TD G+ L +S E +LW + + L S G
Sbjct: 231 LSRLVLRNCVKLTDVGLARLAGVSGRELPQLWAPAGPGSPPPVPRLRSP---------GA 281
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ L LDL G ++ RG A S L G +++ +
Sbjct: 282 RLPAAAAPPPCRRPPLASLDLAGCVLLTERGFAAAASGLAASLTELLLGGCSRVSTVG-- 339
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
D +LE L + +AG T + + E + + S L L N +
Sbjct: 340 ----------DGVLEAVARCRGLRALDMAGCTGVTD-EGTGFTQLSRLQQLSELN---LK 385
Query: 181 FCF---------LTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
C+ L +++L L+L + D + ++ + L +LNL R + G
Sbjct: 386 GCYSLADDGLELLPTLRSLAALNLQECWQVTDRGLAHLSGL-TRLEDLNLQGCRNLANGA 444
Query: 231 G---ILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
G G L L L + G ++ D A+ ++ + SL+ +D+S +++ A+
Sbjct: 445 GQSLSGLGALHRLTSLCMRGCDRLADGALDFLPGLTSLRQLDLSG------CKELTAD-- 496
Query: 287 LVLSLTALQNLNHLERLNLEQTQ--VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLS 343
L L +L L L L+ A L PLST L L+L ++ SL L
Sbjct: 497 ---GLAPLSSLRLLACLRLQHCSGLRGAAALRPLSTLSSLTALNLGGCTAIHGQSLRALG 553
Query: 344 SLSKLTNLSI---RDAVLTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAILQFCKMHPRIE 399
+LS L LS+ R VL ++GL + P L L+L G LT DA LQ KM P
Sbjct: 554 TLSALRQLSLEGCRGVVLLDAGLEALAPSLHRLTSLNLQGCSTLT-DAGLQ--KMGPLTG 610
Query: 400 VWHELSVICPSDQIGSNGPSPSRTSLRASLVKQ 432
+ CPS I G + R L ASL Q
Sbjct: 611 LVSLNLSECPS--ITGAGAAAWRMPLLASLQLQ 641
>gi|46906570|ref|YP_012959.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091468|ref|ZP_00229265.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
gi|81830300|sp|Q723X5.1|INLI_LISMF RecName: Full=Internalin-I; Flags: Precursor
gi|46879835|gb|AAT03136.1| cell wall surface anchor family protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|47020145|gb|EAL10881.1| cell wall surface anchor family protein [Listeria monocytogenes
str. 4b H7858]
Length = 1775
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ + D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|32477277|ref|NP_870271.1| G protein-coupled receptor LGR4 [Rhodopirellula baltica SH 1]
gi|32447828|emb|CAD77346.1| probable G protein-coupled receptor LGR4 [Rhodopirellula baltica SH
1]
Length = 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
DA K + + L + +T +T DG ++L+ L L + L PVTD L S+ L K
Sbjct: 131 DAKAKSISGLPALVAVTFQDTSVTDDGASVLAELNELQDVSLMKSPVTDKTLTSISTLPK 190
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 131
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LESLELAETDFGPEGMPAIANIEGLEKINLWLTKID 249
Query: 132 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L+ E K L +++ I E + + L L + +S+S L Q+K L
Sbjct: 250 NESLKAFEGKTSLTVLNVDNCPAITEEAIPVIVSLPHLKLLHLGKTSVSPDA-LPQLKPL 308
Query: 191 EHLD 194
+ L+
Sbjct: 309 QELE 312
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
S G + LPNL+ L + G DD +S +P+L + +T + V AE
Sbjct: 106 SDGTVLRLAALPNLKRLRVYGKAFDDAKAKSISGLPALVAVTFQDTSVTDDGASVLAE-- 163
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
LN L+ ++L ++ V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 ----------LNELQDVSLMKSPVTDKTLTSISTLPKLTKLNLRGTKITGEAFEPISKL 212
>gi|226222958|ref|YP_002757065.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731097|ref|YP_006204593.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406703104|ref|YP_006753458.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
gi|225875420|emb|CAS04117.1| Putative internalin proteins, putative peptidoglycan bound protein
(LPXTG motif) [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|384389855|gb|AFH78925.1| internalin protein, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes 07PF0776]
gi|406360134|emb|CBY66407.1| internalin I (LPXTG motif) [Listeria monocytogenes L312]
Length = 1775
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|167524527|ref|XP_001746599.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774869|gb|EDQ88495.1| predicted protein [Monosiga brevicollis MX1]
Length = 1226
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LD +R ++ + G L++ LE L +S +TA LLS L +L++L+L + +
Sbjct: 357 LDYNR-IRYLEPGTFQRLTV--LEHLDISSNAITALPAGLLSDLSSLTMLELQSNRIAAI 413
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL-PNI----SSLE 121
+ Q LT L L W +Q+S+ A+L +L L L+ + L P+ + LE
Sbjct: 414 DVHVFQDLTALTVLYAWQNQLSDLDPALLAPLSQLRILFLSTNRLRTLHPDTLAAQTRLE 473
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN--SSLS 179
L L++C +D++ E L + + G+ + L+ TSL S N +SL
Sbjct: 474 QLGLADCQLDALPENLVRSDRLQALYIRGSGVTALPHSLLFNTTSLQSLYAAENRLASLP 533
Query: 180 RFCFLTQMKALEHLDLSSSMIGD---DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
F + L+ LDL +S+I D ++ + +L+NL+L+ R +S +
Sbjct: 534 DGAFRGYAQLLD-LDLGNSLIADLEGQTIHLDLAASMSLQNLDLTGMRLNSVTFSQIT-E 591
Query: 237 LPNLEILSLSG 247
L NL L++ G
Sbjct: 592 LVNLTYLAMGG 602
>gi|254992878|ref|ZP_05275068.1| internalin proteins, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes FSL J2-064]
Length = 1775
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|254825619|ref|ZP_05230620.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
gi|293594862|gb|EFG02623.1| cell wall surface anchor family protein [Listeria monocytogenes FSL
J1-194]
Length = 1775
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|297728491|ref|NP_001176609.1| Os11g0565920 [Oryza sativa Japonica Group]
gi|77551585|gb|ABA94382.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
gi|125577543|gb|EAZ18765.1| hypothetical protein OsJ_34291 [Oryza sativa Japonica Group]
gi|255680194|dbj|BAH95337.1| Os11g0565920 [Oryza sativa Japonica Group]
Length = 985
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 154/397 (38%), Gaps = 66/397 (16%)
Query: 23 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LL+++ LE + LS+ G T L SLQNL L+L G+P + V L LT L Y
Sbjct: 144 LLNLTYLEHIDLSKNQLQGQTGRVPEFLGSLQNLRYLNLSGIPFSGEVPPQLGNLTNLHY 203
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE- 138
L L S+ G ++F ++ W L + SL L++S+ ++ + + +
Sbjct: 204 LGL-----SDTG---------INFTDIQW-----LARLHSLTHLDMSHTSLSMVHDWADV 244
Query: 139 -NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
N P K+ L++ L + D S S F + LE LDLS
Sbjct: 245 MNNIPSLKV--------------LHLAYCNLVYAD---QSFSHF----NLTNLEELDLSV 283
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
+ L+ LNL +T+ + G +L L LS T D +
Sbjct: 284 NYFNHPIASCWFWNAQGLKYLNLGSTKLYGQFPNV-PGQFGSLRFLDLSSTCNIDIVTTN 342
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
++ + +L+ I + + I G I + +L + N L L L +S
Sbjct: 343 LTNLCNLRIIHLERSQIHGDIAK-------LLQRLPRCSYNRLNELYLSDNNISGILPNR 395
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSLKLLD 376
L L+ L + + L+ Q+ S LT L + L + F RSLK LD
Sbjct: 396 LDHLTSLVILDISHNKLSGPLPPQIGMFSNLTYLDLSSNNLNGVIIDEHFTSMRSLKTLD 455
Query: 377 LHGG---------WLL---TEDAILQFCKMHPRIEVW 401
L G WL E A+ C M PR W
Sbjct: 456 LSGNSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGW 492
>gi|290980799|ref|XP_002673119.1| predicted protein [Naegleria gruberi]
gi|284086700|gb|EFC40375.1| predicted protein [Naegleria gruberi]
Length = 426
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 157/382 (41%), Gaps = 72/382 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L ++ + G K++ + L L + +T DG +S ++ L+ L + G
Sbjct: 104 MKQLKQLHIANN-NIGPEGAKYISGLEQLTFLNIRANEITMDGAKFISEMKQLTGLKIVG 162
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPN 116
+ D + + + +L LD+ + + GA + + L++ + GV
Sbjct: 163 NNICDEGAKFISGMKQLTNLDIASNNIGENGAKYVSEMMNIRKLDIGFNSINDGVKCFGE 222
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ L LN+++C I L GT +I+ +F + L+ L ++ +
Sbjct: 223 MKQLTDLNVNSCC----------------IGLDGTKYIS---SF-----NQLTHLSIAEN 258
Query: 177 SLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
++ + ++QMK L LD+S + I D+ V+ ++
Sbjct: 259 LITPYGAIHISQMKNLIKLDISDNRIRDNGVQSIS------------------------- 293
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
+ L L++S I I Y+ M +L ++ I++ +I G + S +
Sbjct: 294 -EMNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNI-------GEK-----SANQI 340
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+ HL +L++ V D +S ++L L + + D + LS + +LT L+
Sbjct: 341 SEMKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIGYNEIGDEGVKALSGMKQLTRLNAV 400
Query: 355 DAVLTNSGLGSFKPPRSLKLLD 376
D +++ G K R + L D
Sbjct: 401 DNNISDEGE---KYIREMNLAD 419
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 161/381 (42%), Gaps = 40/381 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L++ K+ +G K++ S+ L L+++ D L SL++L+ L + G
Sbjct: 31 MKELKKLNIEFNSKIDPSGFKYICSLEQLTDLYMTFCYFGFDIAKHLPSLKSLTYLLITG 90
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ + + + +L+ L + + + GA + +L+FLN+ +T
Sbjct: 91 NYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIRANEIT-------- 142
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+D +E K L + + G +E F+ L+ LD++++++
Sbjct: 143 ---------MDGAKFISEMK-QLTGLKIVGNNICDEGAKFIS-GMKQLTNLDIASNNIGE 191
Query: 181 FC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGH 236
++++M + LD+ + I D V C G L +LN+++ G ++
Sbjct: 192 NGAKYVSEMMNIRKLDIGFNSINDG----VKCFGEMKQLTDLNVNSCCIGLDGTKYISS- 246
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L LS++ I Y ++S M +L +DIS+ I+ + ++
Sbjct: 247 FNQLTHLSIAENLITPYGAIHISQMKNLIKLDISDNRIRDN------------GVQSISE 294
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+N L LN+ ++ + + L +L + + ++ + S +Q+S + L LSI
Sbjct: 295 MNQLTELNVSSIDITPIGIQYICKMDNLTYLIIAHNNIGEKSANQISEMKHLAQLSIYHN 354
Query: 357 VLTNSGLGSFKPPRSLKLLDL 377
+ + G L LD+
Sbjct: 355 AVGDEGAKFISEMEQLTFLDI 375
>gi|424713203|ref|YP_007013918.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
gi|424012387|emb|CCO62927.1| Internalin-I [Listeria monocytogenes serotype 4b str. LL195]
Length = 1631
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 267 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 322
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 323 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 378
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A N + + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 379 EFYAQNN--NVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 436
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 437 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 493
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 494 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 544
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 545 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 596
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 174 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 230
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 231 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 287
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 288 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 321
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 322 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 375
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ + D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 376 SLKEFYAQNNNVSD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 433
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 434 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 488
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 489 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 521
>gi|38194513|gb|AAR13263.1| F-box and leucine-rich repeat protein 13 transcript variant 2 [Homo
sapiens]
Length = 690
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +QVS +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQVSVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
>gi|405754422|ref|YP_006677886.1| internalin I [Listeria monocytogenes SLCC2540]
gi|404223622|emb|CBY74984.1| internalin I (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 1775
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 51/354 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 411 LKTLALDGCGITS--IGTLDNLPKLEKLDLKENQLTSI--SEINDLPRLSYLDVSVNYLT 466
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 467 TIGE--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTV--GKMTELPSLK 522
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + + L +D SN+ ++ + L++LD+ S+ I + SV
Sbjct: 523 EFYAQNNNISDIS--MIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV 580
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL L + F+ G LP LEIL ++
Sbjct: 581 IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVT--- 637
Query: 250 IDDYA----ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
D+Y+ + M + L+ +++ N ++ G E +L +AL +L +L LNL
Sbjct: 638 -DNYSYLRSLGTMDGVSKLRNLELQN----NYLNYTGTEGNL----SALSDLTNLTELNL 688
Query: 306 -EQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLT--NLSIRD 355
+ +SD + LST LI+L+L + + D+S L L++L +LT N I D
Sbjct: 689 RDNGYISD--ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIED 740
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 164/393 (41%), Gaps = 57/393 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ +D S C + G + +S LE + LS + I L L NL +
Sbjct: 318 TKLQLIDASNCTDLETLG--DISGLSELEMIQLSGCSKLKE-ITSLKDLPNLVNITADSC 374
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNIS 118
+ DL +L L KL+ L L ++ A+ M P+L L L G+T L N+
Sbjct: 375 AIEDL--GTLNNLPKLQTLILSDNKDLTNINAITDM-PQLKTLALDGCGITSIGTLDNLP 431
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
LE L+L + SI E N+ L + LS+LDVS + L
Sbjct: 432 KLEKLDLKENQLTSISEIND----LPR----------------------LSYLDVSVNYL 465
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L ++ LE L++SS+ + D S +L +N+SN + G LP
Sbjct: 466 TTIGELKKLPLLEWLNVSSNRLSDVS---TLTNFPSLNYINVSNNVIRTVG---KMTELP 519
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TDIKGF-----IQQVGAETDLVLS 290
+L+ I D IS + MP+L+ +D SN T+I F +Q + ++ + +
Sbjct: 520 SLKEFYAQNNNISD--ISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLHQLSSLSKLT 349
+ + +L LE + +++ + T L L+ + S + SL + L KL
Sbjct: 578 TSVIHDLPSLETFYAQNNLITN-----IGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLE 632
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L + D LG+ L+ L+L +L
Sbjct: 633 ILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYL 665
>gi|290977067|ref|XP_002671260.1| predicted protein [Naegleria gruberi]
gi|284084827|gb|EFC38516.1| predicted protein [Naegleria gruberi]
Length = 378
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 165/390 (42%), Gaps = 46/390 (11%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T EL + VT+ G+K + + L+K+ + +G+ +S L LD+
Sbjct: 11 TTTNELSYNHNYIVTN-GLKAIAELKQLKKINFHRNQIGQNGLQTISQFNQLLCLDISCN 69
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPN 116
+ +++ L +L+ LD+ + + + GA + L+ L + + G + +
Sbjct: 70 GIGIEGAKAVSELNQLKELDITANDIGDIGAKYISQMKELTKLYVRYNDINSQGASSIGE 129
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ L LN+S I G+E ++ + L+ L V N+
Sbjct: 130 LHQLTKLNISYNNI-----GDEGMKVISGM-------------------KHLTKLSVHNN 165
Query: 177 SLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
++ F++QMK L +L +S + IG + VE ++ + + L L +S+ + + G IL
Sbjct: 166 HINVGSSQFISQMKQLTNLSISENHIGIEGVETISQL-SQLTRLKISSNQIGARGA-ILI 223
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
L L LS+ +I+D + + + L T +K Q+G E + ++
Sbjct: 224 SKLDKLTKLSIGSNRINDEGLKSLCRLKHL-------TKLKADFNQIGNE-----GVKSI 271
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L L L++ +S ++ K+L L + + + +S L++L L IR
Sbjct: 272 IQLKQLTFLDIGGNNISHKGAQFINQLKQLRTLYISENQIGNKGAKLISELTQLRILHIR 331
Query: 355 DAVLTNSGLGSFKPPRSLKLLDLHGGWLLT 384
L++ G+ S + L LDL + +T
Sbjct: 332 KNELSDEGVKSILLMKQLTELDLRENYDIT 361
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++++ L+ LD++++ IGD + ++ + L L + +S G + G L L L
Sbjct: 79 VSELNQLKELDITANDIGDIGAKYISQM-KELTKLYVRYNDINSQGASSI-GELHQLTKL 136
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLS--------L 291
++S I D + +S M L + + N I FI Q+ T+L +S +
Sbjct: 137 NISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIGIEGV 196
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L+ L RL + Q+ +S +L LS+ + + D L L L LT L
Sbjct: 197 ETISQLSQLTRLKISSNQIGARGAILISKLDKLTKLSIGSNRINDEGLKSLCRLKHLTKL 256
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSD 411
+ N G+ S + L LD+ G + + A QF ++ + +
Sbjct: 257 KADFNQIGNEGVKSIIQLKQLTFLDIGGNNISHKGA--QFINQLKQLRTLY-----ISEN 309
Query: 412 QIGSNGP 418
QIG+ G
Sbjct: 310 QIGNKGA 316
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG----HLPN 239
+ ++K L+ ++ + IG + ++ ++ L S G+GI L
Sbjct: 31 IAELKQLKKINFHRNQIGQNGLQTISQFNQ------LLCLDISCNGIGIEGAKAVSELNQ 84
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ L ++ I D Y+S M L + + DI GA +++ L+
Sbjct: 85 LKELDITANDIGDIGAKYISQMKELTKLYVRYNDINS----QGA--------SSIGELHQ 132
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L +LN+ + D + +S K L LS+ N + S +S + +LTNLSI + +
Sbjct: 133 LTKLNISYNNIGDEGMKVISGMKHLTKLSVHNNHINVGSSQFISQMKQLTNLSISENHIG 192
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
G+ + L L + + AIL
Sbjct: 193 IEGVETISQLSQLTRLKISSNQIGARGAIL 222
>gi|255536164|ref|YP_003096535.1| Two component regulator three Y domain protein [Flavobacteriaceae
bacterium 3519-10]
gi|255342360|gb|ACU08473.1| Two component regulator three Y domain protein [Flavobacteriaceae
bacterium 3519-10]
Length = 542
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
+ + S L+KL LS LT + +SSL +L LD+ +T + +L LE L
Sbjct: 81 YFSTFSKLKKLDLSSNQLTGEISNSVSSLTDLVRLDISNNRLTGDPAAATAMLINLEELS 140
Query: 82 LWGSQ-VSNRGAAVLKMFPRLSFLNLAWTGVTKLPN----ISSLECLNLSNCTIDSILEG 136
L +Q V N + L+ FP L L+LA T + +P L+ LNLSN T+
Sbjct: 141 LGNNQFVFNDVESFLQNFPNLRILDLAHTQLLAVPQKISGFPKLQSLNLSNNTLSQNFSA 200
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSF--LDVSNSSLS--RFCFLTQMKALEH 192
L +++L+GT I + +E S L LDVSN++ + L+ M LE
Sbjct: 201 LSTLLQLTELNLSGTQLIK-----IPVELSGLPLVTLDVSNNAFAPNYSMVLSNMSELEW 255
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L L ++ + E+ L +LNLS + + G A L NLE L L+ QI+
Sbjct: 256 LSLENNQLTALPRELAQL--KKLVHLNLSGNKITGGFDGFSA--LKNLEQLYLNHNQIEG 311
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQ 280
+ + + L+ + ++ + G I +
Sbjct: 312 NFPAALLQLDKLQMLSLTGNQLTGEIPE 339
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L LD+S++ + D A + NL L+L N +F V + PNL IL L+ TQ
Sbjct: 112 LVRLDISNNRLTGDPAAATAML-INLEELSLGNNQFVFNDVESFLQNFPNLRILDLAHTQ 170
Query: 250 IDDYAI-SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+ A+ +S P L+ +++SN L + +AL L L LNL T
Sbjct: 171 L--LAVPQKISGFPKLQSLNLSN-------------NTLSQNFSALSTLLQLTELNLSGT 215
Query: 309 Q-----------------VSDATLFP-----LSTFKELIHLSLRNASLTDVSLHQLSSLS 346
Q VS+ P LS EL LSL N LT + +L+ L
Sbjct: 216 QLIKIPVELSGLPLVTLDVSNNAFAPNYSMVLSNMSELEWLSLENNQLTALP-RELAQLK 274
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
KL +L++ +T G F ++L+ L L+
Sbjct: 275 KLVHLNLSGNKIT-GGFDGFSALKNLEQLYLN 305
>gi|320102882|ref|YP_004178473.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
gi|319750164|gb|ADV61924.1| hypothetical protein Isop_1339 [Isosphaera pallida ATCC 43644]
Length = 185
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ L +L L+ +TDA + + S+S+L KL+L ETG+T G+A L +L +L L G
Sbjct: 59 IPTLTKLVLNNNKSLTDAALDPIPSMSSLRKLYLVETGITDTGLAKLKDHPSLEILSLVG 118
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
VTD + SLQ + L+ L + G+ +S+ LK
Sbjct: 119 TNVTDAAVPSLQAMPALKELFVAGTPISDEALRALK 154
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
++LR L L T + G+ L H P+LEILSL GT + D A+ + MP+LK + ++ T
Sbjct: 85 SSLRKLYLVETGITDTGLAKLKDH-PSLEILSLVGTNVTDAAVPSLQAMPALKELFVAGT 143
Query: 273 DI 274
I
Sbjct: 144 PI 145
>gi|229149630|ref|ZP_04277861.1| Internalin [Bacillus cereus m1550]
gi|228633840|gb|EEK90438.1| Internalin [Bacillus cereus m1550]
Length = 766
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRD 481
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 306
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
V L + N++ L LSG QI+D
Sbjct: 307 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 328
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 375
Query: 348 LTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 376 LYTLPLKDLVLT 387
>gi|153939809|ref|YP_001392382.1| internalin [Clostridium botulinum F str. Langeland]
gi|384463356|ref|YP_005675951.1| putative internalin [Clostridium botulinum F str. 230613]
gi|152935705|gb|ABS41203.1| putative internalin [Clostridium botulinum F str. Langeland]
gi|295320373|gb|ADG00751.1| putative internalin [Clostridium botulinum F str. 230613]
Length = 364
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ LSSL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 -SNCTID--SILEGNENKAPLAKISLAGTTF-----INEREAF--LYI------------ 163
+N ID IL + L ++LAG F IN+ ++ LYI
Sbjct: 199 HNNGVIDFKPILRMQQ----LTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLK 254
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
S L LDVSN+ ++ ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNYIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 166/372 (44%), Gaps = 84/372 (22%)
Query: 13 VKVTDAGMKHLLSISTLEK-LWLSETGLTADGIA---LLSSLQNLSVLDLGGLPVTDLVL 68
+K+ +A M + I+ LE+ + L L + I+ LS L L L+L +TD+
Sbjct: 60 IKLLNADMSSIKDITGLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITDV-- 117
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
SL L LE L LW + ++N + L L L W K+ N+SSL L
Sbjct: 118 -SLSGLANLETLSLWDNHITNVSLSGLTNLDTL----LLWGN--KIINVSSLSGL----- 165
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
+ L+ LD+S + ++ L+ +
Sbjct: 166 -------------------------------------TNLTDLDLSTNQITDASPLSGLT 188
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
L LDL ++ I D V+ + NL NL+LS+ R ++ L+G L N+ L L
Sbjct: 189 NLTDLDLDNNQITD-----VSSLSGLINLMNLDLSSNRITNVS---LSG-LTNVVWLDLW 239
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL---------VLSLTALQNL 297
G QI D +S ++ +L ++D+S I + + T+L + +++L L
Sbjct: 240 GNQITDVTLSGLT---NLTWLDVSRNQIAD-VSSLSGLTNLTKLYLGCNQITDVSSLSGL 295
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS--KLTNLSIRD 355
+L L+L Q++DA+ PLS L +L L N + DVSL L++L+ +L+N I D
Sbjct: 296 TNLTDLDLSTNQITDAS--PLSGLTNLTYLDLDNNRINDVSLSDLTNLTDLELSNNQIND 353
Query: 356 AVLTNSGLGSFK 367
V + SGL + K
Sbjct: 354 -VSSLSGLTNLK 364
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 183/398 (45%), Gaps = 93/398 (23%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L +LDLS ++TDA L ++ L L L +T ++ LS L NL LDL
Sbjct: 165 LTNLTDLDLSTN-QITDA--SPLSGLTNLTDLDLDNNQIT--DVSSLSGLINLMNLDLSS 219
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNIS 118
+T++ SL LT + +LDLWG+Q+++ + L NL W V++ + ++S
Sbjct: 220 NRITNV---SLSGLTNVVWLDLWGNQITDVTLSGLT--------NLTWLDVSRNQIADVS 268
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
SL L L K+ L G I + + + L+ LD+S + +
Sbjct: 269 SLSGL-----------------TNLTKLYL-GCNQITDVSSLSGLTN--LTDLDLSTNQI 308
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+ L+ + L +LDL ++ I D S+ + NL +L LSN + + V L+G L
Sbjct: 309 TDASPLSGLTNLTYLDLDNNRINDVSLSDLT----NLTDLELSNNQIND--VSSLSG-LT 361
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET----DL------- 287
NL+ L LS QI+D IS +S + +L +++S+ +I + DL
Sbjct: 362 NLKDLDLSNNQIND--ISSLSGLTNLTDLELSSNEITNISSLSSLASLRCLDLDNNQIID 419
Query: 288 VLSLTALQNL-------NH------------LERLNLEQTQVSDATLFPLSTFKELIHLS 328
V SL+AL +L NH L L+L Q++D + PLS L L+
Sbjct: 420 VSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLSSNQITDVS--PLSGLYNLGWLN 477
Query: 329 LRNASLTDVS--------------LHQLSSLSKLTNLS 352
L + +TDVS +Q++ +S L+NL+
Sbjct: 478 LSSNQITDVSPLSGLANLTGLDLSSNQITDVSPLSNLT 515
>gi|218232900|ref|YP_002366112.1| internalin [Bacillus cereus B4264]
gi|218160857|gb|ACK60849.1| putative internalin [Bacillus cereus B4264]
Length = 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VMPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRD 475
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 54/192 (28%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L L V+N+ + F +K L HL L + D M NL +L+LSN + ++
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFAD---VMPLVKMDNLESLDLSNNKITN 300
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
V L + N++ L LSG QI+D
Sbjct: 301 --VAPLT-EMKNVKSLFLSGNQIED----------------------------------- 322
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 ---VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDIKP 369
Query: 348 LTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 370 LYTLPLKDLVLT 381
>gi|326435264|gb|EGD80834.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1626
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 187 MKALEHLDLSSSMIGDDSV-EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+ LEHLD++ + + +++A +GA++R+LNL++T +SA + +A P+LE+L +
Sbjct: 588 LAQLEHLDMAYVRLPPARLHDVLASIGASIRHLNLTSTAVTSAMLEQVAAAWPDLEVLDI 647
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
S T +D ++ + P L+ +D+S T I + L+ +L A N+ L
Sbjct: 648 SNTAVD--SLLPLRHTPKLRVLDVSFTRITTLEPITTGQLPLLTTLRA-ANVTRL----- 699
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 365
T + A P + L HL++ LT +S + + S L +L N GL
Sbjct: 700 --THLGGAGALP--SLPHLQHLTISGTGLTRISDNAFAGASNLVSLEFS----FNDGLRH 751
Query: 366 FKP 368
P
Sbjct: 752 VSP 754
>gi|71051494|gb|AAH26121.1| FBXL13 protein [Homo sapiens]
gi|119603705|gb|EAW83299.1| F-box and leucine-rich repeat protein 13, isoform CRA_b [Homo
sapiens]
Length = 684
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 454
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 455 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 503
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 504 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 559
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 560 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 619
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 620 FSLVSIDLSGTDI 632
>gi|168700135|ref|ZP_02732412.1| hypothetical protein GobsU_11445 [Gemmata obscuriglobus UQM 2246]
Length = 120
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LDL KVTD G+K L + L +L L+ T +T G+ LS L L+ LDLG V
Sbjct: 10 LTQLDLFD-TKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLDLGFTKV 68
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
TD +++L L L L+L + V++ G L L+ L+L++T VT
Sbjct: 69 TDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFTRVT 117
Score = 47.4 bits (111), Expect = 0.018, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
MK L ++ L +L L +T +T G+ LS L+ L+ L+L VTD +++L LT L
Sbjct: 1 MKELAALKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQVTDAGVKALSGLTALTT 60
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
LDL ++V++ G L L LNL T GV L + L L+LS
Sbjct: 61 LDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLS 112
Score = 43.9 bits (102), Expect = 0.17, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VTDAG+K L ++ L L L T +T G+ LS L++L L+LG VTD +++L
Sbjct: 43 QVTDAGVKALSGLTALTTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAG 102
Query: 74 LTKLEYLDLWGSQVSNRG 91
L L LDL ++V++ G
Sbjct: 103 LKGLTILDLSFTRVTDAG 120
Score = 43.1 bits (100), Expect = 0.29, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L L RL L TQV+DA + LS L L L +TD + LS L L L++
Sbjct: 28 LSGLKGLTRLELTFTQVTDAGVKALSGLTALTTLDLGFTKVTDAGVKALSGLKHLIQLNL 87
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDL 377
V+T++G+ + + L +LDL
Sbjct: 88 GVTVVTDAGVKALAGLKGLTILDL 111
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L L L L T++ D + +S + L ++++ T + TD + AL
Sbjct: 7 LKGLTQLDLFDTKVTDVGVKELSGLKGLTRLELTFTQV----------TDA--GVKALSG 54
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L L L+L T+V+DA + LS K LI L+L +TD + L+ L LT L +
Sbjct: 55 LTALTTLDLGFTKVTDAGVKALSGLKHLIQLNLGVTVVTDAGVKALAGLKGLTILDLSFT 114
Query: 357 VLTNSG 362
+T++G
Sbjct: 115 RVTDAG 120
>gi|119603706|gb|EAW83300.1| F-box and leucine-rich repeat protein 13, isoform CRA_c [Homo
sapiens]
Length = 806
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 43/305 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLKM----FPRLS 102
TD L+ L + KL YLDL G +Q+S +G ++ + P L+
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 454
Query: 103 FLNLAWTGVTKLPNISSL---ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
N G+ K I+SL ++S+CT ++ + L KI G + + +
Sbjct: 455 D-NCVKVGIEKCSRITSLVFTGAPHISDCTFRAL-----SACKLRKIRFEGNKRVTD-AS 507
Query: 160 FLYIET-----SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACV 211
F +I+ S + D + S L+ +K L L+L++ + IGD ++
Sbjct: 508 FKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPA 567
Query: 212 GANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDI 269
+R LNLSN R S A V L+ PNL LSL + + I Y+ + SL ID+
Sbjct: 568 SMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDL 627
Query: 270 SNTDI 274
S TDI
Sbjct: 628 SGTDI 632
>gi|407849405|gb|EKG04153.1| hypothetical protein TCSYLVIO_004793 [Trypanosoma cruzi]
Length = 835
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 210 CVGANLRNLNLSNTRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
C +LR L+LS T SA + +L L L + S SG + S++ + SL +
Sbjct: 378 CALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVK----DASFVEGLLSLGHL 433
Query: 268 DISNTDIKGF----IQQVGAETDLVLS----LTALQ---NLNHLERLNLEQTQVSDATLF 316
D+++T IK +++ A T L L LT +Q L L LNLE T+V DA +
Sbjct: 434 DLTDTSIKDAGTQSLRKCTALTFLSLQDCRFLTDIQFVEPLKDLLNLNLEGTEVVDANII 493
Query: 317 PLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
PL +L LSLR+ LTDV L L L +L + +T+ G+ SL+ +
Sbjct: 494 PLMHCTKLEVLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGVSDVSQCISLERI 551
Query: 376 DLHGGWLLTEDAILQ 390
DL G L+T L+
Sbjct: 552 DLSGCCLITHFEFLR 566
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 162/381 (42%), Gaps = 55/381 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + L C+K+ G+ L S+ L L +S ++ DGI LS+L+NL L L
Sbjct: 266 LRHIQLDNCMKL--QGINCLGSLIGLRTLSVSRNRVSDDGIRSLSNLRNLEQLRLVSFNR 323
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTKLPNISS 119
V + L KL LD+ + V++ G A L ++ L LA + V + ++S
Sbjct: 324 LSSV-EPVLCLDKLLELDITENWVTDEGCAALANCGQIQKLKLASCRCVSDVRWICALTS 382
Query: 120 LECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
L L+LS + S +L + L S +G + E L L LD+++
Sbjct: 383 LRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVKDASFVEGLLS-----LGHLDLTD 437
Query: 176 SSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+S+ L + AL L L D ++ V + +L NLNL T A + I
Sbjct: 438 TSIKDAGTQSLRKCTALTFLSLQDCRFLTD-IQFVEPL-KDLLNLNLEGTEVVDANI-IP 494
Query: 234 AGHLPNLEILSL-----------------------SGTQIDDYAISYMSMMPSLKFIDIS 270
H LE+LSL SGT + D +S +S SL+ ID+S
Sbjct: 495 LMHCTKLEVLSLRHCLFLTDVRCLRELKALKSLDLSGTYVTDEGVSDVSQCISLERIDLS 554
Query: 271 NTD-IKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
I F ++ V A+ VL +T L +ER+++ + + +
Sbjct: 555 GCCLITHFEFLRPLTALRHVIADRMNVLDVTGLGGSGSVERVSIADCKRLGS--MGMLEA 612
Query: 322 KELIHLSLRNASLTDVSLHQL 342
L+ LSL+ +++TD +H +
Sbjct: 613 PRLLDLSLKKSAITDSGIHSV 633
>gi|332868074|ref|XP_001157861.2| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Pan troglodytes]
gi|397466183|ref|XP_003804847.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 4 [Pan paniscus]
Length = 684
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLT 454
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 455 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 503
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 504 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 559
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 560 KQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 619
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 620 FSLVSIDLSGTDI 632
>gi|46447466|ref|YP_008831.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401107|emb|CAF24556.1| hypothetical protein pc1832 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 456
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP 62
LK LDL C TDAG+ HL ++ L+ L L+ D G+A LS L L L+L G
Sbjct: 250 LKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCD 309
Query: 63 VTDLVLRSLQVLTKLEYLDL---WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTK 113
+TD L L+ L L++LDL W +++ G A L+ L LNL G+
Sbjct: 310 LTDAGLVHLKPLIALKHLDLMRCWN--LTDAGLAHLRPLVALQHLNLTNCENITDVGLAH 367
Query: 114 LPNISSLECLNLSNCTIDSILEGN-----ENKAPLAKISLAGTTFINE------REAFLY 162
L + +L+ L+L C L GN + L ++L+G +++ + R
Sbjct: 368 LTPLVALKHLDLMQCW---KLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHLRPLVAL 424
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 195
L + +++++ L+ F FL A HLDL
Sbjct: 425 QHLDLANCYELTDAGLAHFKFLA---ATTHLDL 454
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 291 LTALQNLNHLERLNLEQT-QVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 348
L AL+N +L+ L+L++ +DA L L+ L HL L +TD L LS L L
Sbjct: 241 LLALKNCKNLKVLDLQECWNFTDAGLAHLTPLTALQHLDLTGCFRVTDTGLAHLSPLVAL 300
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
+L++ LT++GL KP +LK LDL W LT+ + + P + + H
Sbjct: 301 QHLNLIGCDLTDAGLVHLKPLIALKHLDLMRCWNLTDAGL---AHLRPLVALQH 351
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 27/253 (10%)
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQM--KALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
Y+E +++S L +S L+ F + + +E L+ S++ D+ + NL+ L+
Sbjct: 195 YLELNVVSALLNQSSQLTEFEEILKYFSNEIEALNFSNNADLTDAHLLALKNCKNLKVLD 254
Query: 220 LSNT-RFSSAGVGILAGHLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDI--K 275
L F+ AG+ L L L+ L L+G ++ D ++++S + +L+ +++ D+
Sbjct: 255 LQECWNFTDAGLAHLTP-LTALQHLDLTGCFRVTDTGLAHLSPLVALQHLNLIGCDLTDA 313
Query: 276 GFIQ-------------QVGAETDLVLS-LTALQNLNHLERLNLEQ-TQVSDATLFPLST 320
G + + TD L+ L L L HL N E T V A L PL
Sbjct: 314 GLVHLKPLIALKHLDLMRCWNLTDAGLAHLRPLVALQHLNLTNCENITDVGLAHLTPLVA 373
Query: 321 FKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRD-AVLTNSGLGSFKPPRSLKLLDLH 378
K HL L LT L +L SL L +L++ + LT++GL +P +L+ LDL
Sbjct: 374 LK---HLDLMQCWKLTGNGLARLRSLVALQHLNLSGCSYLTDAGLAHLRPLVALQHLDLA 430
Query: 379 GGWLLTEDAILQF 391
+ LT+ + F
Sbjct: 431 NCYELTDAGLAHF 443
>gi|119603712|gb|EAW83306.1| F-box and leucine-rich repeat protein 13, isoform CRA_i [Homo
sapiens]
Length = 690
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
>gi|161333854|ref|NP_001104508.1| F-box/LRR-repeat protein 13 isoform 2 [Homo sapiens]
Length = 690
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
>gi|108864517|gb|ABA94272.2| Leucine Rich Repeat family protein, expressed [Oryza sativa
Japonica Group]
gi|215686810|dbj|BAG89660.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 630
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 44/284 (15%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + + + L
Sbjct: 91 TGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSADISWLT 150
Query: 97 MFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCTIDSILEG--NENKAPLAK 145
L +L L+ W V I SL L+LS C++ + + N L K
Sbjct: 151 RLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLKHVNLTRLEK 208
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLSSS----- 198
+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S +
Sbjct: 209 LHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFSRNNNAGI 268
Query: 199 --------------------MIGDDSVEMVA----CVGANLRNLNLSNTRFSSAGVGILA 234
++ + E++ C LR L LSN +
Sbjct: 269 LEPILLRNLCNLESLNLQLGLLSGNMTELLESLSHCSPNKLRKLYLSNNNITGTLPAQSM 328
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
G +L + S Q+ + + + SL +D+S + G I
Sbjct: 329 GQFTSLANIGFSFNQLTGHVPPEIGKLASLTHLDLSENKLTGTI 372
>gi|290993851|ref|XP_002679546.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093163|gb|EFC46802.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 385
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 71/377 (18%)
Query: 45 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMF----P 99
++L +++ L L + + + + ++S+ + +L LD+ G + +GA+ L F
Sbjct: 28 SILMNMKKLKTLSIAYIGMDEEDIKSICNMRQLTDLDVTGCSIGKGQGASTLVTFIDQLQ 87
Query: 100 RLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
+L+ L ++W G+ IS L+ L + + +I L GT I+E
Sbjct: 88 QLTRLVISWNRIGIEGAKAISQLKQLT---------------ELEINQIGLEGTKIISE- 131
Query: 158 EAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVE--------- 206
+ L+ L+++N+ + + ++++MK L LD+ ++ +G + V+
Sbjct: 132 -------LNQLTSLNIANNKMGKQGAKYISEMKQLTKLDIGTNQLGVEGVQYIRKLDKLT 184
Query: 207 -------MVACVGA-------NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
++ GA L LN+S G ++ LPNL IL+LS I
Sbjct: 185 ALSVFNNVIGFRGAMLLRKMTQLTELNISTNAIGDVGAKFVS-DLPNLAILNLSFNSISY 243
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAE-TDLVLSLTALQNLNHLERLNLEQTQVS 311
++S +P L ++++ D+ G E + + +L NL+ L+ T++
Sbjct: 244 VGAQFISKLPKLTELNMNQNDL-------GNEGVKFISGIISLTNLS------LQTTRID 290
Query: 312 D-ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
+ F K+L L L ++ D L +L KLT+LS+ + G + +
Sbjct: 291 EHGVKFISEKLKQLRILKLCENNIGDAGAKFLITLEKLTDLSLYSNNIGYEGAKAISTMK 350
Query: 371 SLKLLDLHGGWLLTEDA 387
+L L +HG + E A
Sbjct: 351 ALTHLRIHGNPIGIEGA 367
>gi|290991272|ref|XP_002678259.1| predicted protein [Naegleria gruberi]
gi|284091871|gb|EFC45515.1| predicted protein [Naegleria gruberi]
Length = 434
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 92/370 (24%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG-------------- 60
+ + G+ ++++S L L + +T++G+ L+ L NL++LD+ G
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAEGGQYIGEL 164
Query: 61 -----LPVTD-----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG 110
L +D L +S+ + +L L L G+ + N GA + +L+ L+L
Sbjct: 165 KNLKTLVASDNELGVLGAKSIGEMNQLTSLCLIGNSIGNEGAKYISQLSQLTDLDLGKNE 224
Query: 111 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+ G+E LAK+ E+ L+
Sbjct: 225 I------------------------GDEGFKLLAKL---------EK----------LTN 241
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
LD+ ++++S Q+ L LD+ + I D + + C + L++L L +S G
Sbjct: 242 LDLVSNNISDLSSTGQLGLLNCLDVRKNKIEDKGIRNI-CQLSGLQSLRLCANPITSEGA 300
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETD 286
IL+ + L LS+S T IDD +++ + +LK++DIS I FI Q
Sbjct: 301 KILS-EMVQLTNLSISETHIDDEGAKFIAQLTTLKYLDISTKRITANGVKFICQ------ 353
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
L+ L L++ + D + +S ++L L NA ++ L LS
Sbjct: 354 ----------LSKLISLDINWNNIGDEGVLYISRMQQLETL---NAVYCNIGLEGAKLLS 400
Query: 347 KLTNLSIRDA 356
++ L++ D
Sbjct: 401 EMEQLTVLDV 410
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R K+ D G++++ +S L+ L L +T++G +LS + L+ L + + D +
Sbjct: 267 RKNKIEDKGIRNICQLSGLQSLRLCANPITSEGAKILSEMVQLTNLSISETHIDDEGAKF 326
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
+ LT L+YLD+ +++ G + +L L++ W GV + + LE LN
Sbjct: 327 IAQLTTLKYLDISTKRITANGVKFICQLSKLISLDINWNNIGDEGVLYISRMQQLETLNA 386
Query: 126 SNCTIDSILEG 136
C I LEG
Sbjct: 387 VYCNIG--LEG 395
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
NL LN+ + S IL+G + +L+IL+ SG++ID + S + L ++++
Sbjct: 3 NLTYLNIDWNKISEKSKIILSG-MKHLKILAASGSEIDKF-----SRLDQLTELNVNWNR 56
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+K + D+ ++ NL +L L L ++S ++ +S EL LS+ S
Sbjct: 57 LK--------DEDV----ESIGNLKNLTLLELSGNEISKNSMKFISQLSELTKLSVGLNS 104
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
+ + ++ + +LSKLT L+I +A +T+ G+ +L +LD+ G + E
Sbjct: 105 IENEGINSIINLSKLTCLNIINANITSEGVKLIGKLSNLTILDISGNLIGAE 156
>gi|413937766|gb|AFW72317.1| hypothetical protein ZEAMMB73_434085 [Zea mays]
Length = 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L++ C + D+ +K+L ++ L+ L LS +T G++ + LQ L+ L+L G
Sbjct: 233 LTKLESLNMRYCNYIADSDIKYLTDLTNLKDLQLSCCKITDLGVSYIRGLQKLTHLNLEG 292
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
PVT L ++ L+ L L+L + + G + RL LNL + +T L
Sbjct: 293 CPVTAACLEAISGLSSLVLLNLNRCGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLK 352
Query: 116 NISSLECLNLSNCTI 130
+ SLE LNL +C I
Sbjct: 353 ELISLESLNLDSCKI 367
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 25/135 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA------------------- 41
+T LK+L LS C K+TD G+ ++ + L L L +TA
Sbjct: 258 LTNLKDLQLS-CCKITDLGVSYIRGLQKLTHLNLEGCPVTAACLEAISGLSSLVLLNLNR 316
Query: 42 -----DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
DG L+ L VL+LG +TD L L+ L LE L+L ++ + G + LK
Sbjct: 317 CGIYDDGCENFEGLKRLKVLNLGFNYITDACLVHLKELISLESLNLDSCKIGDDGLSHLK 376
Query: 97 MFPRLSFLNLAWTGV 111
L L L+ T V
Sbjct: 377 GLVLLQSLELSDTEV 391
>gi|332238075|ref|XP_003268228.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Nomascus
leucogenys]
Length = 690
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 61/314 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 57
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 58 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG---------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTL 363
Query: 92 -----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAK 145
A+++ R++ +L +TG P+IS LS C + I EGN +
Sbjct: 364 TDNCVKALVEKCSRIT--SLVFTGA---PHISDCTFKALSTCKLRKIRFEGNR------R 412
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDS 204
++ A FI++ Y S + D + S L+ +K L L+L++ + IGD
Sbjct: 413 VTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMG 468
Query: 205 VEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSM 260
++ +R LNLSN + S A V L+ PNL LSL + + I Y+
Sbjct: 469 LKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVN 528
Query: 261 MPSLKFIDISNTDI 274
+ SL ID+S TDI
Sbjct: 529 IFSLVSIDLSGTDI 542
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 47 LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
+S +NL L++ P TD +R + + + YL+L + ++NR +++ PR F
Sbjct: 241 VSHCRNLQELNVSDCPTFTDESMRHISEGCLGVLYLNLSNTTITNR---TMRLLPR-HFH 296
Query: 105 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
NL N+S C ++ + + GN L + L+G T I+ + F YI
Sbjct: 297 NLQ--------NLSLAYCRRFTDKGLQYLNLGN-GCHKLIYLDLSGCTQISV-QGFRYIA 346
Query: 165 TSLLSFLDVSNS---SLSRFCFLTQMKAL-EHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
S + ++ + +L+ C +KAL E +S++ + + C L L
Sbjct: 347 NSCTGIMHLTINDMPTLTDNC----VKALVEKCSRITSLVFTGAPHISDCTFKALSTCKL 402
Query: 221 SNTRF------SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT- 272
RF + A + + PNL + ++ + I D ++ +S + L ++++N
Sbjct: 403 RKIRFEGNRRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCV 462
Query: 273 ---DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS-TFKELIHLS 328
D+ G Q + + + L N Q+SDA++ LS L +LS
Sbjct: 463 RIGDM-GLKQFLDGPASIRIRELNLSNC----------VQLSDASVMKLSERCPNLNYLS 511
Query: 329 LRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
LRN LT + + ++ L ++ + ++N GL + LK L + + +T+D
Sbjct: 512 LRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDDG 571
Query: 388 I 388
I
Sbjct: 572 I 572
>gi|114615213|ref|XP_001157967.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pan troglodytes]
gi|397466177|ref|XP_003804844.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Pan paniscus]
Length = 735
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 59/396 (14%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L +S +NL L++ P TD +R + +
Sbjct: 213 VSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPG 272
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ L+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 273 VLCLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 320
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS---SLSRFCFLTQMKAL-EH 192
N L + L+G T I+ + F YI S + ++ + +L+ C +KAL E
Sbjct: 321 N-GCHKLIYLDLSGCTQISV-QGFRYISNSCTGIMHLTINDMPTLTDNC----VKALVEK 374
Query: 193 LDLSSSMIGDDSVEMVACV-----GANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLS 246
+S++ + + C LR + N R + A + + PNL + ++
Sbjct: 375 CSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMA 434
Query: 247 GTQ-IDDYAISYMSMMPSLKFIDISNT------DIKGFIQQVGAETDLVLSLTALQNLNH 299
+ I D ++ +S + L ++++N +K F+ G + + L NL++
Sbjct: 435 DCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLD--GPASIKIREL----NLSN 488
Query: 300 LERLNLEQTQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 357
RL SDA++ LS L +LSLRN LT + + ++ L ++ +
Sbjct: 489 CVRL-------SDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTD 541
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++N GL + LK L + + +T+D I FCK
Sbjct: 542 ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
>gi|290991518|ref|XP_002678382.1| predicted protein [Naegleria gruberi]
gi|284091994|gb|EFC45638.1| predicted protein [Naegleria gruberi]
Length = 344
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 30/280 (10%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ-NLSVLDLGGLPVTDLVLRSL 71
++ D GMK + + L KL + + +GI LS+L +L+ L + + ++L
Sbjct: 36 TEIGDEGMKSIGKMKQLTKLEMCGNKIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTL 95
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLS 126
+ LT+L YLD+ +++ N+GA + P+L+ L N+ G + I +L L +S
Sbjct: 96 KHLTRLNYLDIRKNKLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMS 155
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINERE------------AFLYIETSLLSFLDVS 174
I G + + L + + N R L+I+++ L F D+
Sbjct: 156 ENPIGD--GGAISVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIK 213
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+ Q+ L L +S + IGD ++++ + L NL + ++ G L+
Sbjct: 214 --------PIGQLNQLTRLLISDNQIGDSGAKIISELNQ-LTNLRIYDSNIGIEGAKSLS 264
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
G + NL L+LSG +I + + +S M L+ + + + +I
Sbjct: 265 G-MKNLTKLNLSGNKIGNKGLEAISGMLQLQKLSVIHCEI 303
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ +MK L L++ + IGD+ ++ ++ + ++L +L + G L HL L L
Sbjct: 46 IGKMKQLTKLEMCGNKIGDEGIKALSNLNSSLTHLCVRKNNIGQEGAKTLK-HLTRLNYL 104
Query: 244 SLSGTQIDDYAISYMSMMPSLK--FIDISNTDIKGF--IQQVGAETDLVLS--------L 291
+ ++ + +S +P L FI +N +G I ++ T LV+S
Sbjct: 105 DIRKNKLGNQGAKEISELPQLTRLFICKNNIGDEGAKAIGEIQTLTQLVMSENPIGDGGA 164
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
++ L HL+ L ++ T V + + K+L L +++ L + + L++LT L
Sbjct: 165 ISVSQLRHLKTLCIQWTNVRTEGIKAICNMKQLTCLHIQSNKLGFDDIKPIGQLNQLTRL 224
Query: 352 SIRDAVLTNSG 362
I D + +SG
Sbjct: 225 LISDNQIGDSG 235
>gi|114615221|ref|XP_001157713.1| PREDICTED: F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|397466181|ref|XP_003804846.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 3 [Pan paniscus]
Length = 707
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 7 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP- 62
LDLS C +++ G +++ S + + L +++ D AL+ ++ L G P
Sbjct: 329 LDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPH 388
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL-KMFPRLSFLNLA-WTGVT-----KL 114
++D R+L KL + G++ V++ + K +P LS + +A G+T L
Sbjct: 389 ISDCTFRALSA-CKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSL 447
Query: 115 PNISSLECLNLSNCT------IDSILEGNE-------NKAPLAKISLAGTTFINER---- 157
+ L LNL+NC + L+G N + ++S A ++ER
Sbjct: 448 SPLKQLTVLNLANCVRIGDMGLKQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNL 507
Query: 158 -------------EAFLYIET--SLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIG 201
+ YI SL+S +D+S + +S F LEHLD+S S +
Sbjct: 508 NYLSLRNCEHLTAQGIGYIVNIFSLVS-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLS 566
Query: 202 DDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG 247
D ++ +A NL +L+++ + + + + +L+ L IL +SG
Sbjct: 567 DMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISG 613
>gi|423564273|ref|ZP_17540549.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
gi|401197304|gb|EJR04237.1| hypothetical protein II5_03677 [Bacillus cereus MSX-A1]
Length = 760
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|291230586|ref|XP_002735244.1| PREDICTED: partner of paired-like [Saccoglossus kowalevskii]
Length = 396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 4 LKELDLSRCVKVTDAGMKH----------LLSISTLEKLWLSETGLTADGIALLSSLQNL 53
L+ L+LS C +TD G+ H +L++S +++ S G A L+NL
Sbjct: 94 LQSLNLSGCYNLTDVGLAHAFVREMPSLTVLNLSLCKQITDSSLGRIAQ------YLRNL 147
Query: 54 SVLDLGG---LPVTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPR------LSF 103
LDLGG + T L+L + LTKL YL+L + VS+ G A L + L
Sbjct: 148 EHLDLGGCCNITNTGLLLIAWG-LTKLRYLNLRSCRHVSDSGIAHLAGLTKNDAGGTLFL 206
Query: 104 LNLAWTGVTKLPNIS---------SLECLNLSNC--TIDSILEGNENKAPLAKISLAGTT 152
+L KL +++ LE LNLS C DS + L +++L
Sbjct: 207 QHLVLQDCQKLTDLALLNAARGLVKLESLNLSFCGGITDSGMVHLSRMPSLKELNLRSCD 266
Query: 153 FINE------REAFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
I++ E Y+ T +SF D V ++SL+ M +L + LSS I DD +
Sbjct: 267 NISDIGIAHLAEGGAYLRTLDVSFCDKVGDASLTHIA--QGMYSLMSISLSSCPITDDGM 324
Query: 206 EMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPS 263
+ +L+ LN+ +R + G+G++A +L L + L G T+I + + +P
Sbjct: 325 ARLVRTLRDLKTLNIGQCSRITDEGLGLIATNLRKLSCIDLYGCTKITTVGLEKIMQLPC 384
Query: 264 LKFIDIS 270
L +++
Sbjct: 385 LSVLNLG 391
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 163/354 (46%), Gaps = 52/354 (14%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+S+L +L+LS G I L+SL NL+VLDLG + D ++ L LT L L+L+G+
Sbjct: 86 LSSLTELFLS--GNVIGDITPLASLTNLTVLDLGFNALGD--IKPLASLTNLTRLNLFGN 141
Query: 86 QVSN-RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLA 144
Q+ + + A L L+ N + L ++++L L LS+ + I PLA
Sbjct: 142 QIGDIKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQVGDI-------KPLA 194
Query: 145 ------KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 198
++ L G I + + + L+ LD+ + + L + L LDL +
Sbjct: 195 SLTNLTRLDLDG-NVIGDIKPLASLTN--LTRLDLDGNVIGDIKPLASLTNLSSLDLDDN 251
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
IGD ++ +A + NL L+L R + LA L NL LSL QI D I +
Sbjct: 252 QIGD--IKPLASL-TNLMGLDLR--RIVIGDIKPLA-SLTNLTDLSLDDNQIGD--IKPL 303
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
+ + +L + +S+ I+ + L +L +L L+L + D + PL
Sbjct: 304 ASLTNLTRLVLSSNQIR--------------DIKPLASLTNLSSLDLSGNVIGD--IKPL 347
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
++ L L L N + D+ L+SL+KLT L++ V +G KP SL
Sbjct: 348 ASLTNLSSLDLNNNKIGDI--KPLASLTKLTELTLSGNV-----IGDIKPLASL 394
>gi|332668444|ref|YP_004451232.1| Miro domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337258|gb|AEE54359.1| Miro domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1058
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 62/312 (19%)
Query: 52 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
+L V DL +P +S+ LT+L+ L + S+V + ++++ L+ L+L+ T V
Sbjct: 21 DLRVYDLTKIP------QSIVTLTELKVLRI-KSRVLKDLSPLMQLH-NLTTLDLSSTPV 72
Query: 112 TKL---PNISSLECLNLSNCTIDSILEGNENKAPLAKIS-----LAGTTFINEREAFLYI 163
+ L + +L LN+SN + + +PLA++ A T +++ +
Sbjct: 73 SNLRPLAQLRNLTQLNISNTHVKDL-------SPLAQLYNLTELFASETKVSDLSPLAQL 125
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L+ LDVSNS +S L Q+ L LD+S+S GD S + R L N+
Sbjct: 126 HN--LTTLDVSNSGVSDLSPLAQLHDLTTLDVSNS--GDLS---------DTRWL-FGNS 171
Query: 224 RFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
F V L+ L NL LS S T + D ++ +S + +L + I NT
Sbjct: 172 TFYRTDVSDLSPLTQLHNLTWLSFSKTPVSD--LTPLSQLHNLTQLFIYNT--------- 220
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
LV L L+ L++L+RL++ T VSD L P+S + L L + N +++D
Sbjct: 221 -----LVSDLRPLEQLHNLDRLDVSNTTVSD--LSPVSQLQNLTKLYVYNTAVSD----- 268
Query: 342 LSSLSKLTNLSI 353
LS L KL NL+I
Sbjct: 269 LSPLEKLYNLNI 280
>gi|119603704|gb|EAW83298.1| F-box and leucine-rich repeat protein 13, isoform CRA_a [Homo
sapiens]
Length = 735
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 43/305 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLKM----FPRLS 102
TD L+ L + KL YLDL G +Q+S +G ++ + P L+
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 103 FLNLAWTGVTKLPNISSL---ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
N G+ K I+SL ++S+CT ++ + L KI G + + +
Sbjct: 365 D-NCVKVGIEKCSRITSLVFTGAPHISDCTFRAL-----SACKLRKIRFEGNKRVTD-AS 417
Query: 160 FLYIET-----SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACV 211
F +I+ S + D + S L+ +K L L+L++ + IGD ++
Sbjct: 418 FKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPA 477
Query: 212 GANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDI 269
+R LNLSN R S A V L+ PNL LSL + + I Y+ + SL ID+
Sbjct: 478 SMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDL 537
Query: 270 SNTDI 274
S TDI
Sbjct: 538 SGTDI 542
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 166/392 (42%), Gaps = 51/392 (13%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L +S +NL L++ P TD +R + +
Sbjct: 213 VSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPG 272
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ L+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 273 VLCLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 320
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
N L + L+G T I+ + F YI S + ++ + + +E
Sbjct: 321 N-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGIMHLTINDMPTLTDNCVKVGIEKCSRI 378
Query: 197 SSMIGDDSVEMVACV-----GANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQ- 249
+S++ + + C LR + N R + A + + PNL + ++ +
Sbjct: 379 TSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKG 438
Query: 250 IDDYAISYMSMMPSLKFIDISNT------DIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
I D ++ +S + L ++++N +K F+ G + + L NL++ RL
Sbjct: 439 ITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLD--GPASMRIREL----NLSNCVRL 492
Query: 304 NLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
SDA++ LS L +LSLRN LT + + ++ L ++ + ++N
Sbjct: 493 -------SDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNE 545
Query: 362 GLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
GL + LK L + + +T+D I FCK
Sbjct: 546 GLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
>gi|325108218|ref|YP_004269286.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
gi|324968486|gb|ADY59264.1| hypothetical protein Plabr_1653 [Planctomyces brasiliensis DSM
5305]
Length = 1046
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++T AG+K L S+ L+++ L T + IALL L++L +DL +T+ L L
Sbjct: 439 QLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGLAELAN 498
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 109
+T LE++DL G+ ++N+G A L L L L T
Sbjct: 499 ITSLEWIDLQGTDITNQGVAALAALNDLQRLELRGT 534
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 9 LSRC----VKVTDAGMKH--------LLSISTLEKLWLSETGLTADGIALLSSLQNLSVL 56
LSRC +++T G+KH L TL L L +T LT D + LSSL +L VL
Sbjct: 374 LSRCQAEIIELTGRGLKHIPNEIFSQLAKSETLRDLRLWDTALTDDNLQALSSLTSLRVL 433
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---- 112
G +T L+ L + L+ + L G+ ++ A+L+ L ++LA + +T
Sbjct: 434 CADGHQLTPAGLKQLASMPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGL 493
Query: 113 -KLPNISSLECLNLSNCTI 130
+L NI+SLE ++L I
Sbjct: 494 AELANITSLEWIDLQGTDI 512
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 145 KISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
+I G F+ +R+ + +E + + LD N + L+ +L + ++S I D
Sbjct: 286 QIRNRGGVFVGDRDLIIGVEKNTNPADLDWMNCNDDDVALLSDCPSLRRVYIASDAITDR 345
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG---TQIDDYAISYMSM 260
+ E++A LR++ L+ + + A + L+ EI+ L+G I + S ++
Sbjct: 346 AAELLADT-QQLRHIRLTGNQLTEASLRHLS--RCQAEIIELTGRGLKHIPNEIFSQLAK 402
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
+L+ + + +T A TD +L AL +L L L + Q++ A L L++
Sbjct: 403 SETLRDLRLWDT----------ALTDD--NLQALSSLTSLRVLCADGHQLTPAGLKQLAS 450
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L + L A+ TD ++ L L L + + D+ +TN+GL SL+ +DL G
Sbjct: 451 MPFLQEIRLPGANWTDETIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQG 509
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+E+ L TD + L + +L ++ L+++ +T G+A L+++ +L +DL G
Sbjct: 451 MPFLQEIRLP-GANWTDETIALLQPLKSLRRIDLADSAITNAGLAELANITSLEWIDLQG 509
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA--AVLKMFP 99
+T+ + +L L L+ L+L G++ NRG+ + K FP
Sbjct: 510 TDITNQGVAALAALNDLQRLELRGTRC-NRGSWNTLSKPFP 549
>gi|332868064|ref|XP_001158024.2| PREDICTED: F-box/LRR-repeat protein 13 [Pan troglodytes]
gi|397466179|ref|XP_003804845.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Pan paniscus]
Length = 690
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYISNSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASIKIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
>gi|423361390|ref|ZP_17338892.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
gi|401079838|gb|EJP88132.1| hypothetical protein IC1_03369 [Bacillus cereus VD022]
Length = 760
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|119603709|gb|EAW83303.1| F-box and leucine-rich repeat protein 13, isoform CRA_f [Homo
sapiens]
Length = 707
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 7 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP- 62
LDLS C +++ G +++ S + + L +++ D AL+ ++ L G P
Sbjct: 329 LDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPH 388
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL-KMFPRLSFLNLA-WTGVT-----KL 114
++D R+L KL + G++ V++ + K +P LS + +A G+T L
Sbjct: 389 ISDCTFRALSA-CKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSL 447
Query: 115 PNISSLECLNLSNCT------IDSILEGNE-------NKAPLAKISLAGTTFINER---- 157
+ L LNL+NC + L+G N + ++S A ++ER
Sbjct: 448 SPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 507
Query: 158 -------------EAFLYIET--SLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIG 201
+ YI SL+S +D+S + +S F LEHLD+S S +
Sbjct: 508 NYLSLRNCEHLTAQGIGYIVNIFSLVS-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLS 566
Query: 202 DDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG 247
D ++ +A NL +L+++ + + + + +L+ L IL +SG
Sbjct: 567 DMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISG 613
>gi|22658403|gb|AAH31285.1| FBXL13 protein [Homo sapiens]
gi|123981278|gb|ABM82468.1| F-box and leucine-rich repeat protein 13 [synthetic construct]
gi|123996109|gb|ABM85656.1| F-box and leucine-rich repeat protein 13 [synthetic construct]
Length = 707
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 48/287 (16%)
Query: 7 LDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLGGLP- 62
LDLS C +++ G +++ S + + L +++ D AL+ ++ L G P
Sbjct: 329 LDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPH 388
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVL-KMFPRLSFLNLA-WTGVT-----KL 114
++D R+L KL + G++ V++ + K +P LS + +A G+T L
Sbjct: 389 ISDCTFRALSA-CKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSL 447
Query: 115 PNISSLECLNLSNCT------IDSILEGNE-------NKAPLAKISLAGTTFINER---- 157
+ L LNL+NC + L+G N + ++S A ++ER
Sbjct: 448 SPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNL 507
Query: 158 -------------EAFLYIET--SLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIG 201
+ YI SL+S +D+S + +S F LEHLD+S S +
Sbjct: 508 NYLSLRNCEHLTAQGIGYIVNIFSLVS-IDLSGTDISNEAFCKSSLILEHLDVSYCSQLS 566
Query: 202 DDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSG 247
D ++ +A NL +L+++ + + + + +L+ L IL +SG
Sbjct: 567 DMIIKALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISG 613
>gi|21757336|dbj|BAC05092.1| unnamed protein product [Homo sapiens]
gi|119603710|gb|EAW83304.1| F-box and leucine-rich repeat protein 13, isoform CRA_g [Homo
sapiens]
Length = 735
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 59/396 (14%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L +S +NL L++ P TD +R + +
Sbjct: 213 VSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPG 272
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ L+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 273 VLCLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 320
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS---SLSRFCFLTQMKAL-EH 192
N L + L+G T I+ + F YI S + ++ + +L+ C +KAL E
Sbjct: 321 N-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGIMHLTINDMPTLTDNC----VKALVEK 374
Query: 193 LDLSSSMIGDDSVEMVACV-----GANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLS 246
+S++ + + C LR + N R + A + + PNL + ++
Sbjct: 375 CSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMA 434
Query: 247 GTQ-IDDYAISYMSMMPSLKFIDISNT------DIKGFIQQVGAETDLVLSLTALQNLNH 299
+ I D ++ +S + L ++++N +K F+ G + + L NL++
Sbjct: 435 DCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLD--GPASMRIREL----NLSN 488
Query: 300 LERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 357
RL SDA++ LS L +LSLRN LT + + ++ L ++ +
Sbjct: 489 CVRL-------SDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTD 541
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++N GL + LK L + + +T+D I FCK
Sbjct: 542 ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
>gi|125577549|gb|EAZ18771.1| hypothetical protein OsJ_34299 [Oryza sativa Japonica Group]
Length = 673
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 44/284 (15%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + + + L
Sbjct: 134 TGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSADISWLT 193
Query: 97 MFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCTIDSILEG--NENKAPLAK 145
L +L L+ W V I SL L+LS C++ + + N L K
Sbjct: 194 RLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLKHVNLTRLEK 251
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLSSS----- 198
+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S +
Sbjct: 252 LHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFSRNNNAGI 311
Query: 199 --------------------MIGDDSVEMVA----CVGANLRNLNLSNTRFSSAGVGILA 234
++ + E++ C LR L LSN +
Sbjct: 312 LEPILLRNLCNLESLNLQLGLLSGNMTELLESLSHCSPNKLRKLYLSNNNITGTLPAQSM 371
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
G +L + S Q+ + + + SL +D+S + G I
Sbjct: 372 GQFTSLANIGFSFNQLTGHVPPEIGKLASLTHLDLSENKLTGTI 415
>gi|160914190|ref|ZP_02076412.1| hypothetical protein EUBDOL_00199 [Eubacterium dolichum DSM 3991]
gi|158434001|gb|EDP12290.1| leucine Rich Repeat protein [Eubacterium dolichum DSM 3991]
Length = 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 44/266 (16%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ---NLSVLDLGGLPVTDLVLRS 70
K+T MK L+ +S + GI L L+ NL+ LDL + DL
Sbjct: 22 KITKEEMKKLIRLSA-----------RSCGIVSLEGLEYAENLTYLDLCANAIEDLT--P 68
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNL 125
++ L ++EYL++ + + R L+ F +L L NL ++ L + +LE LNL
Sbjct: 69 IKGLREIEYLNVSKNML--RDIQALRDFRQLVRLDLSRNNLYTMDISALAGMHNLEELNL 126
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD------VSNSSLS 179
C +D+++ EN L ++ + E F S+L LD ++ L
Sbjct: 127 ERCKVDNLMYL-ENVKKLKRLHVGI-----ENGPF---PLSILGMLDNLVEVHMNKMWLY 177
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
LT +K +E LDLS+++ D S + + LR+LNL+N + + +L PN
Sbjct: 178 DIADLTYLKKIEVLDLSTNLFRDLSP--LQYMKQTLRSLNLTNNMYLH-DLSMLK-EFPN 233
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLK 265
LEIL +S +DD+ S++ + +LK
Sbjct: 234 LEILEISYDSVDDF--SFLKELKNLK 257
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 137/333 (41%), Gaps = 56/333 (16%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL--------VLRSLQVLTKLEYL 80
+ K+WL + IA L+ L+ + VLDL DL LRSL + +
Sbjct: 171 MNKMWLYD-------IADLTYLKKIEVLDLSTNLFRDLSPLQYMKQTLRSLNLTNNMYLH 223
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDSIL 134
DL ++LK FP L L +++ V +L N+ L + C + L
Sbjct: 224 DL----------SMLKEFPNLEILEISYDSVDDFSFLKELKNLKELRATESNLCDM-RYL 272
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
G L K+ ++ I+ E + L + L FL K LE ++
Sbjct: 273 HG---LTKLEKLDVSSNRLIHTEEL---AQMKKLRYFKACGCFLDNIDFLKDAKQLEEIN 326
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
+ ++ I V + C ++ +N + S+ + NLE + LS I D
Sbjct: 327 VYNNRIKSIDV-LKGCEHMTTMDVGANNIKDISS-----LADMKNLECVGLSHNVITD-- 378
Query: 255 ISYMSMMPSLKFIDISN---TDIKGFIQQVGA-----ETDLVLSLTALQNLNHLERLNLE 306
++ + + +L ID+ N TD+ + V + + V+ LT L++ +L L L+
Sbjct: 379 LTPLKDLTNLASIDLYNNVITDLTPLEKLVNLSSLRLDHNGVMDLTPLEHCEYLSSLTLK 438
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
VSD T PLS K L L L + + D+S+
Sbjct: 439 ANYVSDVT--PLSKLKHLYELRLDDNPIEDISM 469
>gi|115485937|ref|NP_001068112.1| Os11g0568200 [Oryza sativa Japonica Group]
gi|77551477|gb|ABA94274.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
gi|113645334|dbj|BAF28475.1| Os11g0568200 [Oryza sativa Japonica Group]
gi|125577550|gb|EAZ18772.1| hypothetical protein OsJ_34300 [Oryza sativa Japonica Group]
Length = 645
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 71/416 (17%)
Query: 23 LLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
L+S+ LE L LS L +SSL+NL ++ G+P+T +V L +TKL+Y
Sbjct: 108 LISLEHLEHLDLSNNNLVGPAGRFPRFVSSLRNLIYINFSGMPLTGMVPPQLGNITKLQY 167
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG--- 136
LDL + G + T + L N+ +L L LSN + + +
Sbjct: 168 LDL------SHGIGMYS------------TDIQWLTNLPALRYLGLSNVNLSRVSDWPRV 209
Query: 137 -NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEH 192
N N L + L+G + + ++F + + L LD+S ++ ++ C+ + +L +
Sbjct: 210 VNMNSY-LIVLDLSGCSLTSASQSFSQLNLTRLEKLDLSYNNFNQPLASCWFWNLTSLTY 268
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI----LAGHLPNLEILSLSG- 247
LDL +++ + + + A L RFSS G I L +L NLEIL L G
Sbjct: 269 LDLIMNILPGQFPDSLGDMKA------LQVFRFSSNGHSIIMPNLLQNLCNLEILDLGGL 322
Query: 248 --TQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
I + S M + ++ + + + +I G + T + L+ L+
Sbjct: 323 SSCNITELLDSLMHCLTKRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLD 370
Query: 305 LEQTQVSDATLFPLSTFKEL--IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L Q++ + + +S L I LSL N + +++ L+ L L +L++
Sbjct: 371 LSHNQLTGSVPYEISMLTSLAKIDLSLNNLT-GEITEEHLAGLKSLKSLNLYYNPYLKIV 429
Query: 363 LG-SFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 417
LG + PP L E A C++ P W + V I S G
Sbjct: 430 LGDEWLPPFRL------------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 473
>gi|284040762|ref|YP_003390692.1| ribonuclease inhibitor [Spirosoma linguale DSM 74]
gi|283820055|gb|ADB41893.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Spirosoma
linguale DSM 74]
Length = 507
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+++DA + + + L+KL L ET +T G+ L L L L+L G PVTD L L
Sbjct: 392 EISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLAELAE 451
Query: 74 LTKLEYLDLWGSQVSNRGAAVLK-MFPRLSFLN 105
L L+ + LW ++VS G A LK P+L +
Sbjct: 452 LKSLKTVYLWQTKVSEEGIARLKTALPKLEVIG 484
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
N + L L T++SDA L ++ K L L L +TD L QL L+ L L++
Sbjct: 381 NQIVWLKLGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTP 440
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIEV 400
+T++GL +SLK + L W ++E+ I + P++EV
Sbjct: 441 VTDAGLAELAELKSLKTVYL---WQTKVSEEGIARLKTALPKLEV 482
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
L +T ++ +A ++ L+NL L L VTD L+ L+ L LEYL+L+G+ V++ G A
Sbjct: 388 LGDTEISDAALAQVAKLKNLQKLHLEETKVTDAGLKQLKGLAYLEYLNLYGTPVTDAGLA 447
Query: 94 VLKMFPRLSFLNLAWT-----GVTKLPN-ISSLECL-NLSNCTIDSILEGNENKA 141
L L + L T G+ +L + LE + +S + ++ E KA
Sbjct: 448 ELAELKSLKTVYLWQTKVSEEGIARLKTALPKLEVIGGISEQAVAEFVKAGEPKA 502
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L L + I D ++ VA + NL+ L+L T+ + AG+ L G L LE L+L GT + D
Sbjct: 386 LKLGDTEISDAALAQVAKL-KNLQKLHLEETKVTDAGLKQLKG-LAYLEYLNLYGTPVTD 443
Query: 253 YAISYMSMMPSLKFIDISNTDI 274
++ ++ + SLK + + T +
Sbjct: 444 AGLAELAELKSLKTVYLWQTKV 465
>gi|125534802|gb|EAY81350.1| hypothetical protein OsI_36522 [Oryza sativa Indica Group]
Length = 699
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 168/400 (42%), Gaps = 68/400 (17%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TG + SL+NL ++ G+P+T +V L LTKL+YLDL +RG +
Sbjct: 130 TGPAGRFPGFIGSLRNLIYVNFSGMPLTGMVPPQLGNLTKLQYLDL------SRGNGI-- 181
Query: 97 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG----NENKAPLAKISLAGTT 152
+ T + L ++ SL L+LSN + I + N N A L + L+
Sbjct: 182 --------GMYSTDIQWLTHLPSLRYLDLSNVNLSRISDWPRVMNMN-ADLRALYLSSCA 232
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
+ ++F ++ + L LD+S++ ++ C+ + +L +LDL +++ + +
Sbjct: 233 LTSASQSFSHLNFTRLEKLDLSDNDFNQPLASCWFWNLTSLTYLDLIMNILPGQFPDSLG 292
Query: 210 CVGANLRNLNLSNTRFSSAGVGI----LAGHLPNLEIL---SLSGTQIDDYAISYM-SMM 261
+ A L RFSS G I L +L NLEIL SLS I + S M +
Sbjct: 293 DMKA------LQVFRFSSNGHSIIMPNLLRNLCNLEILDLGSLSSCNITELLDSLMHCLT 346
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
++ + + + +I G + T + L+ L+L Q++ + + +S
Sbjct: 347 KRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLDLSHNQLTGSVPYEISML 394
Query: 322 KEL--IHLSLRN--ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L I LSL N +T+ L L SL K +LS + G ++PP L
Sbjct: 395 TSLAKIDLSLNNLTGEITEKHLAGLKSL-KTIDLSSNQYLKIVVG-PEWQPPFRL----- 447
Query: 378 HGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 417
E A C++ P W + V I S G
Sbjct: 448 -------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 480
>gi|452824610|gb|EME31612.1| F-box and leucine-rich repeat protein GRR1 [Galdieria sulphuraria]
Length = 740
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 141/328 (42%), Gaps = 65/328 (19%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS-----LQNLSV 55
+T L+ L+L CVK+ D G+K+L S + L LS T ++ADGIA L+ L+NL +
Sbjct: 244 LTSLETLELYECVKIDDNGLKYLQKCSQIRHLCLSGTCISADGIASLADIFMPHLENLHL 303
Query: 56 LDLGGLPVTDLVLRSLQVLTK------LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 109
L + + SL+ L+K L YL +V A+ FP+L LNL
Sbjct: 304 TRCSNLVGSQFSV-SLRKLSKNMKRLQLRYLHCVDDEVLQ---AISDSFPQLESLNLTDC 359
Query: 110 ------GVTKLPNISSLECLNLSNCTID--SILEGNENKAPLAKISLAGTTFINER-EAF 160
G++ L +SSL L L ++ IL + ++++ ++ +E+ +
Sbjct: 360 RYVTDRGISWLEKLSSLSMLKLGGTSVSDYGILRIKDLLKRISELDISSCILCSEKITSH 419
Query: 161 LYIETSLLSFLDVSNS--------SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
+ L LD+SN+ SLS FL ++ + +G D + VAC+
Sbjct: 420 ILNNVEHLKVLDISNNPQLTKNSWSLSYQNFLKRLPLKTLVIEEGGTLGKDFLTSVACL- 478
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
P LE L LS +ID + L+ + +S+
Sbjct: 479 ------------------------FPKLETLLLSKCRIDGDDFKAFTDFGCLRHLKLSHC 514
Query: 273 DI-KGFIQQVGAETDLVLSL-TALQNLN 298
++ K F + D ++SL ALQ+LN
Sbjct: 515 EVSKPF------KFDFLISLKNALQHLN 536
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 54/266 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+ CLK L ++ C K++ +G++ L + LE L LS +T+D + + SL+NL L L
Sbjct: 169 IPCLKSLSIACCDKISGSGLEQLFYLKRLEFLNLSSCSRITSDALLHIGSLKNLKHLKLR 228
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAWT-----GVT 112
V + L + LT LE L+L+ ++ + G L+ ++ L L+ T G+
Sbjct: 229 NCARVDNRALEHIGNLTSLETLELYECVKIDDNGLKYLQKCSQIRHLCLSGTCISADGIA 288
Query: 113 KLPNI--SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
L +I LE L+L+ C+ +L G+ F
Sbjct: 289 SLADIFMPHLENLHLTRCS-----------------NLVGSQF----------------- 314
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF-SSAG 229
VS LS+ Q++ L +D D+ ++ ++ L +LNL++ R+ + G
Sbjct: 315 -SVSLRKLSKNMKRLQLRYLHCVD-------DEVLQAISDSFPQLESLNLTDCRYVTDRG 366
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAI 255
+ L L +L +L L GT + DY I
Sbjct: 367 ISWLE-KLSSLSMLKLGGTSVSDYGI 391
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 174/412 (42%), Gaps = 83/412 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 62
L+ L LS CV +TD G+ L S S+ L D S L +LDL G
Sbjct: 86 LEALVLSFCVHLTDEGLYKLTS---------SQEDLHKDSPLTCS----LKLLDLSGCSQ 132
Query: 63 VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGVTKLP 115
++++ + +L LE L L S + N + ++ P L L++A +G+ +L
Sbjct: 133 LSNVGMEALSYFRSLETLVLDHCSSLGNISLSYIRDIPCLKSLSIACCDKISGSGLEQLF 192
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ LE LNLS+C ++I+ +A L+I S ++ +
Sbjct: 193 YLKRLEFLNLSSC---------------SRIT---------SDALLHIG----SLKNLKH 224
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG------------ANLRNLNLSNT 223
L R C +ALEH+ +S+ +++E+ CV + +R+L LS T
Sbjct: 225 LKL-RNCARVDNRALEHIGNLTSL---ETLELYECVKIDDNGLKYLQKCSQIRHLCLSGT 280
Query: 224 RFSSAGVGILAG----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
S+ G+ LA HL NL + S +++S + ++K + + ++
Sbjct: 281 CISADGIASLADIFMPHLENLHLTRCSNLVGSQFSVSLRKLSKNMKRLQLR------YLH 334
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVS 338
V E +S + LE LNL + V+D + L L L L S++D
Sbjct: 335 CVDDEVLQAIS----DSFPQLESLNLTDCRYVTDRGISWLEKLSSLSMLKLGGTSVSDYG 390
Query: 339 LHQLSS-LSKLTNLSIRDAVLTNSGLGS--FKPPRSLKLLDLHGGWLLTEDA 387
+ ++ L +++ L I +L + + S LK+LD+ LT+++
Sbjct: 391 ILRIKDLLKRISELDISSCILCSEKITSHILNNVEHLKVLDISNNPQLTKNS 442
>gi|423654209|ref|ZP_17629508.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
gi|401296676|gb|EJS02293.1| hypothetical protein IKG_01197 [Bacillus cereus VD200]
Length = 760
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
L LSSL L L +
Sbjct: 434 L--LSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|392969291|ref|ZP_10334707.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
gi|387843653|emb|CCH56761.1| Leucine-rich repeat, ribonuclease inhibitor subtype [Fibrisoma limi
BUZ 3]
Length = 463
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
A TD L+ A L +L++L+LEQT+V+DA L L L +L+L ++TD L +L
Sbjct: 345 AVTDATLAQVA--KLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLKEL 402
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
+ L L + + +T + L K +SL ++ GG ++E A+ +F K
Sbjct: 403 AELKSLKTVYLWQTNVTETALAELK--KSLPNVEFVGG--ISEQAVAEFTK 449
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
VTDA + + + L+KL L +T +T G+ L L NL L+L G +TD L+ L L
Sbjct: 346 VTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLKELAEL 405
Query: 75 TKLEYLDLWGSQVSNRGAAVLKM-FPRLSFLN 105
L+ + LW + V+ A LK P + F+
Sbjct: 406 KSLKTVYLWQTNVTETALAELKKSLPNVEFVG 437
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L L +T V+DATL ++ K L L L +TD L QL L L L++ +T++G
Sbjct: 339 LKLGETAVTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAG 398
Query: 363 LGSFKPPRSLKLLDLHGGWL--LTEDAILQFCKMHPRIE 399
L +SLK + L W +TE A+ + K P +E
Sbjct: 399 LKELAELKSLKTVYL---WQTNVTETALAELKKSLPNVE 434
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L L + + D ++ VA + NL+ L+L T+ + AG+ L G LPNLE L+L GT I D
Sbjct: 339 LKLGETAVTDATLAQVAKL-KNLQKLHLEQTKVTDAGLKQLKG-LPNLEYLNLYGTAITD 396
Query: 253 YAISYMSMMPSLKFIDISNTDI 274
+ ++ + SLK + + T++
Sbjct: 397 AGLKELAELKSLKTVYLWQTNV 418
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
L ET +T +A ++ L+NL L L VTD L+ L+ L LEYL+L+G+ +++ G
Sbjct: 341 LGETAVTDATLAQVAKLKNLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYGTAITDAGLK 400
Query: 94 VLKMFPRLSFLNLAWTGVTK---------LPNI 117
L L + L T VT+ LPN+
Sbjct: 401 ELAELKSLKTVYLWQTNVTETALAELKKSLPNV 433
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
LVL L+ Q+ + +N + + A L P ++++ L L ++TD +L Q++ L
Sbjct: 300 LVLPLSKEQHQLEVSAVNAKTFSDAQAALLP-KLSQQIVWLKLGETAVTDATLAQVAKLK 358
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L L + +T++GL K +L+ L+L+G
Sbjct: 359 NLQKLHLEQTKVTDAGLKQLKGLPNLEYLNLYG 391
>gi|424834352|ref|ZP_18259063.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
gi|365978698|gb|EHN14767.1| leucine-rich repeat-containing protein [Clostridium sporogenes PA
3679]
Length = 1359
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 180/411 (43%), Gaps = 73/411 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALENSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-----LSFLDVSNSSL 178
NLSNC + S + N L ++L+ + LY ++ L +L ++N+++
Sbjct: 468 NLSNCNLTSNNFLSSNFNNLVYLNLSNLKI---QGNLLYEINNISNLEKLEYLSIANTNV 524
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSV----EMVACVGANL---------RNLNLSNTRF 225
L + L LD++ D V V VG + R + +
Sbjct: 525 VNIDVLRSLGNLIKLDITGCTKIDTQVLNHLSDVEIVGNEIVTFGDKVLEREIRELINNY 584
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--------- 276
S I L ++ L LSG I D + + M +L ++D+SN +I
Sbjct: 585 SEP---IYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNIDSIKKLVK 639
Query: 277 ---------------------FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL 315
+++++ +L+ +TAL L+ L RL+L + + ++
Sbjct: 640 LKKLVLHKNKIGSIKSIESLKYLEELDLSNNLIGDITALGGLSQLTRLDLSRNGI--VSI 697
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
L L +LSL +++ + SL KL NL R+ L NSG+ +F
Sbjct: 698 NSLGGLINLQYLSLYENKISE----REESLKKLYNL--RELYLKNSGVSNF 742
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 58/355 (16%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+K + S+ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKSIESLKYLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLINL 706
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 133
+YL L+ +++S R ++ K++ L L L +GV+ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISEREESLKKLY-NLRELYLKNSGVSNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 134 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+ + + LAKI + G +E E ++ LD+S ++S+ +++
Sbjct: 765 VFDEKRDSDLAKIIREILGK---DENTNIYKSEVDTITDLDLSEGTISKLNISSKL---- 817
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 246
++++I D ++ + NL ++NL G G L G + L L L
Sbjct: 818 ---TNTNVINLDGIQYFS----NLHSINL-------RGHGKLEGLENLIPIRGLIKLDLQ 863
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +I+ ++ Y+ + SL+++ ++N + G L+ L+NL +L L+L
Sbjct: 864 GREINYTSLYYIKYLTSLEYLYLNNMSLTG-------------DLSFLENLTNLRVLDLS 910
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
+T +S+ ++ L ++L L L + ++T+ LSSL LTNL D V N+
Sbjct: 911 RTGISNISI--LDKLRKLNELYLGDNNITN-----LSSLENLTNLVKLDLVENNN 958
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 68/296 (22%)
Query: 77 LEYLDLWGSQVSN---------RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSN 127
L Y+D+ G + N +G LK +L + ++ L + SLE LNL N
Sbjct: 154 LTYMDVAGIKELNVHNKNIKSLKGIEYLKNITKLDISDNNIKDISYLKGLDSLELLNLYN 213
Query: 128 CTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
+I+ I N N L ++L+ N+ + Y++ L LD+ ++ + L
Sbjct: 214 NSIEDISPIN-NMEKLKDVNLSK----NKVKDISYLKDLNLHHLDLRDNKIENIEVLKNK 268
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNL--------SNTRFSSAGVGILAG---- 235
+L+HL L+++ I D S +NL+NL + SN ++ L
Sbjct: 269 TSLQHLYLANNGIKDFS------PISNLKNLQILYLSHNYSSNYDYAKDYYNNLKDKDFK 322
Query: 236 -------------HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
L EI LSG Y S + ++K +D N I+
Sbjct: 323 LNVPIEFKDKVFEELVRKEINKLSG-------YVYPSDLENIKELDFHNAHIE------- 368
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L ++N+ LE+LNL T + D +L T L +++ N S++D++
Sbjct: 369 -------KLNGIENMTALEKLNLSGTDIKDISLLKYLT--NLREVNISNTSISDIT 415
>gi|218896361|ref|YP_002444772.1| internalin [Bacillus cereus G9842]
gi|218544923|gb|ACK97317.1| putative internalin [Bacillus cereus G9842]
Length = 760
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|161333852|ref|NP_659469.3| F-box/LRR-repeat protein 13 isoform 1 [Homo sapiens]
gi|311033450|sp|Q8NEE6.3|FXL13_HUMAN RecName: Full=F-box/LRR-repeat protein 13; AltName: Full=F-box and
leucine-rich repeat protein 13
Length = 735
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLS-ISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 364
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 365 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 413
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 414 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 469
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 470 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 529
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 530 FSLVSIDLSGTDI 542
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 59/396 (14%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L +S +NL L++ P TD +R + +
Sbjct: 213 VSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPG 272
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ L+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 273 VLCLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 320
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS---SLSRFCFLTQMKAL-EH 192
N L + L+G T I+ + F YI S + ++ + +L+ C +KAL E
Sbjct: 321 N-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGIMHLTINDMPTLTDNC----VKALVEK 374
Query: 193 LDLSSSMIGDDSVEMVACV-----GANLRNLNLS-NTRFSSAGVGILAGHLPNLEILSLS 246
+S++ + + C LR + N R + A + + PNL + ++
Sbjct: 375 CSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMA 434
Query: 247 GTQ-IDDYAISYMSMMPSLKFIDISNT------DIKGFIQQVGAETDLVLSLTALQNLNH 299
+ I D ++ +S + L ++++N +K F+ G + + L NL++
Sbjct: 435 DCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLD--GPASMRIREL----NLSN 488
Query: 300 LERLNLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAV 357
RL SDA++ LS L +LSLRN LT + + ++ L ++ +
Sbjct: 489 CVRL-------SDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTD 541
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++N GL + LK L + + +T+D I FCK
Sbjct: 542 ISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCK 577
>gi|373451287|ref|ZP_09543212.1| hypothetical protein HMPREF0984_00254 [Eubacterium sp. 3_1_31]
gi|371968559|gb|EHO86014.1| hypothetical protein HMPREF0984_00254 [Eubacterium sp. 3_1_31]
Length = 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 161/374 (43%), Gaps = 80/374 (21%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ + M+ L+S+S +S GL + NL LDL G + DL ++
Sbjct: 22 EIDEKAMERLVSLSARSAGIISLEGL--------DTAVNLQYLDLCGNSIEDL--DPIKD 71
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 128
L ++EYL+L + + R L+ + +L L NL ++ + + +LE LNL
Sbjct: 72 LREVEYLNLSKNML--RDIQALRGYRQLLRLDISRNNLYTMDISAIAGMINLEELNLERS 129
Query: 129 TIDSILEGNENKAPLAK--ISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLS 179
+D+++ EN L K IS+ F +NE L L ++ L
Sbjct: 130 KVDNLVYL-ENAKKLHKLYISIENGPFPLSILGTLNE-----------LKELHMNKMWLY 177
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
LT +K +E LDLS+++ D + + + LR+LNL+N ++ S IL PN
Sbjct: 178 DIADLTYLKNIEVLDLSTNLFSD--LSPLQYMKKTLRSLNLTNNQYLS-DCSILE-EFPN 233
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
LE+L LS I D++ F+ + Q G L L+ LN
Sbjct: 234 LEVLELSFDSIKDFS-----------FLKKLKNLKDLRLIQSGLS-----DLRILKGLNK 277
Query: 300 LERLNLEQTQVSDATLFP--------------------LSTFKELIHLSLRNASLTDVSL 339
LE+L++ + +V+ + L KEL+ +++ N S+TD+S+
Sbjct: 278 LEKLDISENRVTHTEVLKDMKNLRYFKASCCFLHDIDFLKNAKELVEVNVYNNSITDISV 337
Query: 340 HQLSSLSKLTNLSI 353
L K+T L +
Sbjct: 338 --LKGCEKMTALDV 349
>gi|148381055|ref|YP_001255596.1| capsular polysaccharide biosynthesis protein [Clostridium botulinum
A str. ATCC 3502]
gi|153931337|ref|YP_001385426.1| internalin [Clostridium botulinum A str. ATCC 19397]
gi|153937191|ref|YP_001388833.1| internalin [Clostridium botulinum A str. Hall]
gi|387819365|ref|YP_005679712.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
gi|148290539|emb|CAL84667.1| putative capsular polysaccharide biosynthesis leucine rich repeat
protein [Clostridium botulinum A str. ATCC 3502]
gi|152927381|gb|ABS32881.1| leucine-rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152933105|gb|ABS38604.1| leucine-rich repeat protein [Clostridium botulinum A str. Hall]
gi|322807409|emb|CBZ04983.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
Length = 364
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ LSSL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 SNCTI---DSILEGNENKAPLAKISLAGTTF-----INEREAF--LYI------------ 163
N + + IL + L ++LAG F IN+ ++ LYI
Sbjct: 199 HNNGVIDFEPILRMQQ----LTTVNLAGNNFTDMKDINQLKSLMELYIGDNGIKDLTFLK 254
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
S L LDVSN+ ++ ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|34785062|gb|AAH20572.2| FBXL13 protein, partial [Homo sapiens]
Length = 569
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 59/313 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 81 LQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 140
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 141 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTLT 198
Query: 92 ----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKI 146
A+++ R++ +L +TG P+IS LS C + I EGN+ ++
Sbjct: 199 DNCVKALVEKCSRIT--SLVFTGA---PHISDCTFRALSACKLRKIRFEGNK------RV 247
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSV 205
+ A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 248 TDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGL 303
Query: 206 EMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMM 261
+ +R LNLSN R S A V L+ PNL LSL + + I Y+ +
Sbjct: 304 KQFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNI 363
Query: 262 PSLKFIDISNTDI 274
SL ID+S TDI
Sbjct: 364 FSLVSIDLSGTDI 376
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 166/392 (42%), Gaps = 51/392 (13%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L +S +NL L++ P TD +R + +
Sbjct: 47 VSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESMRHISEGCPG 106
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ L+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 107 VLCLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 154
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
N L + L+G T I+ + F YI S + ++ + + +E
Sbjct: 155 N-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRI 212
Query: 197 SSMIGDDSVEMVACV-----GANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQ- 249
+S++ + + C LR + N R + A + + PNL + ++ +
Sbjct: 213 TSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKG 272
Query: 250 IDDYAISYMSMMPSLKFIDISNT------DIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
I D ++ +S + L ++++N +K F+ G + + L NL++ RL
Sbjct: 273 ITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLD--GPASMRIREL----NLSNCVRL 326
Query: 304 NLEQTQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
SDA++ LS L +LSLRN LT + + ++ L ++ + ++N
Sbjct: 327 -------SDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNE 379
Query: 362 GLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
GL + LK L + + +T+D I FCK
Sbjct: 380 GLNVLSRHKKLKELSVSECYRITDDGIQAFCK 411
>gi|293401961|ref|ZP_06646101.1| putative internalin A [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304619|gb|EFE45868.1| putative internalin A [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 481
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 161/374 (43%), Gaps = 80/374 (21%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ + M+ L+S+S +S GL + NL LDL G + DL ++
Sbjct: 22 EIDEKAMERLVSLSARSAGIISLKGL--------DTAVNLQYLDLCGNSIEDL--DPIKD 71
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNC 128
L ++EYL+L + + R L+ + +L L NL ++ + + +LE LNL
Sbjct: 72 LREVEYLNLSKNML--RDIQALRGYRQLLRLDISRNNLYTMDISAIAGMINLEELNLERS 129
Query: 129 TIDSILEGNENKAPLAK--ISLAGTTF-------INEREAFLYIETSLLSFLDVSNSSLS 179
+D+++ EN L K IS+ F +NE + + L +D
Sbjct: 130 KVDNLVYL-ENAKKLHKLYISIENGPFPLSILGTLNELKELHMNKMWLYDIVD------- 181
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
LT +K +E LDLS+++ D + + + LR+LNL+N ++ S IL PN
Sbjct: 182 ----LTYLKNIEVLDLSTNLFSD--LSPLQYMKKTLRSLNLTNNQYLS-DCSILE-EFPN 233
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
LE+L LS I D++ F+ + Q G L L+ LN
Sbjct: 234 LEVLELSFDSIKDFS-----------FLKKLKNLKDLRLIQSGLS-----DLRILKGLNK 277
Query: 300 LERLNLEQTQVSDATLFP--------------------LSTFKELIHLSLRNASLTDVSL 339
LE+L++ + +V+ + L KEL+ +++ N S+TD+S+
Sbjct: 278 LEKLDISENRVTHTEVLKDMKNLRYFKASCCFLHDIDFLKNAKELVEVNVYNNSITDISV 337
Query: 340 HQLSSLSKLTNLSI 353
L K+T L +
Sbjct: 338 --LKGCEKMTALDV 349
>gi|260822519|ref|XP_002606649.1| hypothetical protein BRAFLDRAFT_91741 [Branchiostoma floridae]
gi|229291993|gb|EEN62659.1| hypothetical protein BRAFLDRAFT_91741 [Branchiostoma floridae]
Length = 827
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 149/380 (39%), Gaps = 64/380 (16%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
++ L+KLWL LT + + L+NL VL L + D+ + T+LEYL L+ +
Sbjct: 193 LNNLQKLWLDGNTLTDLSSDMFTGLENLQVLTLHDNDINDIQAGTFNSTTQLEYLTLYHN 252
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
+++N + + G+ L IS L NE
Sbjct: 253 KLTNLRTDMFR-------------GLGNLQTIS---------------LHNNE------- 277
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDD 203
I++ +A + T L L++ N+ L+ R T + ++HLDL S+ I D
Sbjct: 278 --------ISDIQAGTFTSTPQLGILNLENNKLTSLRSGMFTGLGNVQHLDLRSNEINDI 329
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
E L L L+ + + G+ G L NL+ L L +I D +
Sbjct: 330 EAETFIST-PRLEYLFLNGNKLTHLRSGMFTG-LGNLQRLGLQHNEIKDIQARTFNSTLL 387
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
L+ + I NT + + T L+NL H + L+ +++D + +
Sbjct: 388 LEILKIHNTKLTSLRSGM---------FTGLRNLQHFQ---LQHNEINDIQAGTFISTLQ 435
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL- 382
L L + + LT++ L L L ++ + + G+F L+ L L G +
Sbjct: 436 LRDLFMDDNKLTNLRSDMFIGLENLERLQLQRNGIRDIQAGTFISTPRLEFLYLGGNKIA 495
Query: 383 -LTEDAILQFCKMHPRIEVW 401
LT D F + E+W
Sbjct: 496 HLTSD---MFTGLGNLQELW 512
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 189 ALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+L HLDLS + I D + A ++L NL+L S+ + G L NLE LSL
Sbjct: 75 SLTHLDLSRNHI--DKINGQAFYYLSDLINLDLKENSLSNVSADMFTG-LGNLEYLSLYL 131
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIK----------GFIQQVGAETDLV--LSLTALQ 295
+I++ + P L+ + + N + G +Q++G + + LS
Sbjct: 132 NEINNIQAGTFNSTPQLRDLYMGNNKLTNLSPDMFTWLGNLQKLGLHDNKLSNLSPNMFY 191
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
LN+L++L L+ ++D + + + L L+L + + D+ +S ++L L++
Sbjct: 192 RLNNLQKLWLDGNTLTDLSSDMFTGLENLQVLTLHDNDINDIQAGTFNSTTQLEYLTLYH 251
Query: 356 AVLTNSGLGSFKPPRSLKLLDLH 378
LTN F+ +L+ + LH
Sbjct: 252 NKLTNLRTDMFRGLGNLQTISLH 274
>gi|229126744|ref|ZP_04255756.1| Internalin [Bacillus cereus BDRD-Cer4]
gi|228656684|gb|EEL12510.1| Internalin [Bacillus cereus BDRD-Cer4]
Length = 766
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 342 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 398
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 399 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 456
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S+L KL LS IRD
Sbjct: 457 ISDLS--PVSNLKKLVFLSFVANEIRD 481
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 374 KPLYTLPLKDLVLT 387
>gi|421877770|ref|ZP_16309310.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|421879575|ref|ZP_16311039.1| Internalin F [Leuconostoc citreum LBAE C11]
gi|372556467|emb|CCF25430.1| Internalin F [Leuconostoc citreum LBAE C10]
gi|390446546|emb|CCF27159.1| Internalin F [Leuconostoc citreum LBAE C11]
Length = 672
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 49/333 (14%)
Query: 49 SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW 108
++Q ++ L+L VT+L + L+ T L+ LDL GS +S+ L+ +L+ LNL
Sbjct: 65 NIQTITSLNLSYENVTNL--KGLEYATNLQSLDLSGSNISDLTP--LQNLHQLTVLNLRL 120
Query: 109 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SL 167
+ P+++ +E L L ++L + N + I +
Sbjct: 121 NKASIPPDLAPIENL------------------KLQSLNLFADDYGNYVSRIMPIRNMTT 162
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFS 226
LS LD+ +++L+ + +K L +L LS + + + D + ++ N+ L L + S
Sbjct: 163 LSSLDLGDNALNDLNIIHNLKNLTYLSLSKNNLQNLDGLSQIS----NIETLRLEYNKLS 218
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE-- 284
+ + +L+ LSL + D ++ + + +L+ + +S + +
Sbjct: 219 NID---QLSKMKHLKYLSLGDNSVSD--LTPLKNISTLQELTLSQMSLTNTNLNSLSNLS 273
Query: 285 ---------TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 335
D + SLTAL NL +L++L+ +T VSD L P+S+ K L +LS NAS++
Sbjct: 274 NLTKLSIDFNDKITSLTALTNLTNLQQLDFSKTSVSD--LSPVSSLKNLTNLSFSNASVS 331
Query: 336 DVSLHQLSSLSKLTNLS-IRDAVLTNSGLGSFK 367
D+S L SL+ LT L+ +R+ + S L K
Sbjct: 332 DIS--PLRSLNNLTTLNMLRNHIYDISPLAQLK 362
>gi|224124626|ref|XP_002330070.1| predicted protein [Populus trichocarpa]
gi|222871495|gb|EEF08626.1| predicted protein [Populus trichocarpa]
Length = 1126
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 160/363 (44%), Gaps = 66/363 (18%)
Query: 26 ISTLEKLWLSETGLTADGIALLSS-LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 84
S L+ L LS+ LT G+ +LSS LQ L L L G D + S+ + L+ LDL
Sbjct: 135 FSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSY 194
Query: 85 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNE-NKAPL 143
++++ G VL + + KL N+ L GN+ N +
Sbjct: 195 NELTGSGLKVLS------------SRLQKLENLH---------------LSGNQCNDSIF 227
Query: 144 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
+ I+ F +++ LS+ +V+ S L +++K LE+LDLS + +D
Sbjct: 228 SSIT-----------GFSSLKSLDLSYNEVTGSGLKVLS--SKLKKLENLDLSDNQC-ND 273
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYM 258
S+ ++L+ LNLS + + + GI L L NLE L L ++++ +S +
Sbjct: 274 SIFSSLSGFSSLKYLNLSQNQLTGSSTGINSFQVLVSGLRNLEELHLYSNKLNNNILSSL 333
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
S +LK +D+S+ G T L L +LE L L T ++ L +
Sbjct: 334 SGFSTLKSLDLSDNMFTG--------------STGLNGLRNLETLYLGNTDFKESIL--I 377
Query: 319 STFKELIHLSLRNASLTDVSL--HQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
+ L L +AS ++ + L + S L + + D+ L S L + P +LK+L
Sbjct: 378 ESLGALPSLKTLDASYSNFTHFGKGLCNSSSLEEVFLDDSSLPASFLRNIGPLSTLKVLS 437
Query: 377 LHG 379
L G
Sbjct: 438 LAG 440
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 35/232 (15%)
Query: 159 AFLYIET--SLLSFLDVSNSSLSRF---CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 213
AF + T S L LD+S++ L+ ++++ LE+L LS + D + +
Sbjct: 127 AFFHASTGFSALKSLDLSDNQLTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGF-S 185
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
+L++L+LS + +G+ +L+ L LE L LSG Q +D S ++ SLK +D+S +
Sbjct: 186 SLKSLDLSYNELTGSGLKVLSSRLQKLENLHLSGNQCNDSIFSSITGFSSLKSLDLSYNE 245
Query: 274 IKGFIQQVGAETDLVLSLTALQNLN------------------HLERLNLEQTQVSDATL 315
+ G +V L L L+NL+ L+ LNL Q Q++ ++
Sbjct: 246 VTGSGLKV-----LSSKLKKLENLDLSDNQCNDSIFSSLSGFSSLKYLNLSQNQLTGSST 300
Query: 316 ------FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
+S + L L L + L + L LS S L +L + D + T S
Sbjct: 301 GINSFQVLVSGLRNLEELHLYSNKLNNNILSSLSGFSTLKSLDLSDNMFTGS 352
>gi|357129987|ref|XP_003566640.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Brachypodium distachyon]
Length = 769
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 168 LSFLDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN 222
LSFLD+S +++S C LT++ +L DLS +++ S+ NL+ L LS+
Sbjct: 111 LSFLDLSRNTISGSIPPSICNLTKLTSL---DLSYNLLSQGSMTCTVGTLGNLKKLYLSH 167
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG 282
++ + +L +LE L LS I + + SL+F+D+SN I G I +G
Sbjct: 168 NSLTTGLIPSDLVNLASLESLDLSNNHITGSISRSIGNLTSLEFLDLSNNQIMGSIGSIG 227
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
NL L L+L Q+ + L S L L+L + L + +L
Sbjct: 228 -------------NLTSLRYLDLSNNQIHCSILLTFSKLTSLETLALESNQLNGILPPEL 274
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKP 368
SL L++L++ +N +G+ P
Sbjct: 275 GSLVHLSHLNLS----SNQFVGTIPP 296
>gi|195119542|ref|XP_002004290.1| GI19692 [Drosophila mojavensis]
gi|193909358|gb|EDW08225.1| GI19692 [Drosophila mojavensis]
Length = 819
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I ++ VG
Sbjct: 190 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLNSLERLDLANNKI--KALGTADFVGLG 247
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 271
NL L LSN + SS +G L LE+L L G ++ DYA + +S SL+ +D++
Sbjct: 248 NLVYLELSNNQISSISQRTFSG-LRKLEVLKLGGNRLGDYAQSLKALSQCLSLRQLDLTA 306
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 307 NNLNG-----------PLSEQTLPGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 355
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 356 NQIDVLQDHAFFGLGSLDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 414
>gi|168704644|ref|ZP_02736921.1| hypothetical protein GobsU_34225 [Gemmata obscuriglobus UQM 2246]
Length = 952
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 64/339 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ELDLS C V+D + L +++ L L LS AD ++ L++L L LDL G
Sbjct: 654 LTALEELDLSGCAGVSD--LSPLANLTALRFLDLSGCAGGAD-LSPLANLTALRFLDLSG 710
Query: 61 LP-VTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNL----AWTGVTKL 114
V+DL L LT LE L+L G + VS+ + L L LNL W ++ L
Sbjct: 711 CAGVSDLA--PLANLTALEGLNLRGCAGVSD--LSPLANLTGLRHLNLSGCAGWADLSPL 766
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
N++ L LNL+ CT G + +PLA + + L LD+S
Sbjct: 767 ANLTGLRHLNLNGCT------GVSDLSPLAPL-------------------TALEELDLS 801
Query: 175 N-SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+ +S L + ALE LDLS D + LR L+LS AGV L
Sbjct: 802 GCAGVSDLSPLANLTALEGLDLSGCAGVSDLSPLAPHTA--LRFLDLSGC----AGVSCL 855
Query: 234 AGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
+ P+ L L LSG +S +S + +L ++ + D+ G V L
Sbjct: 856 SPLAPHTALRFLDLSGCA----GVSDLSPLANLTALE--DLDLSGCAG--------VSDL 901
Query: 292 TALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSL 329
+ L NL LE L+L T V D L PL+ L L L
Sbjct: 902 SPLANLTALEGLDLSGCTGVLD--LSPLAPLTALQFLDL 938
>gi|406835554|ref|ZP_11095148.1| ribonuclease inhibitor [Schlesneria paludicola DSM 18645]
Length = 392
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
+ LR L LS+TR ++ +A LP LE+L LS T +DD ++ +S + +LK +++S
Sbjct: 114 SKLRQLRLSSTRVTNEACEKIA-ELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRC 172
Query: 273 DI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
+ + Q +GA LE L + +T + D +L + K L+ L L N
Sbjct: 173 HLTRAGFQAIGA-------------FPALEYLEIRRTNLDDVSLDLVCNAKTLVSLRLSN 219
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+TD L L L + L + + GL
Sbjct: 220 NPITDQGLDALGKLPGIEVLEFNETGIHGWGL 251
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L++L LS +VT+ + + + LE L LS+T + G+A LS L NL L+L +
Sbjct: 116 LRQLRLSS-TRVTNEACEKIAELPALEVLILSDTVVDDVGVAALSRLSNLKSLELSRCHL 174
Query: 64 TDLVLRSLQVLTKLEYLD------------------------LWGSQVSNRGAAVLKMFP 99
T +++ LEYL+ L + ++++G L P
Sbjct: 175 TRAGFQAIGAFPALEYLEIRRTNLDDVSLDLVCNAKTLVSLRLSNNPITDQGLDALGKLP 234
Query: 100 RLSFLNLAWTGV--------TKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAG 150
+ L TG+ K +L+ L+L C +D + + N + K+ L
Sbjct: 235 GIEVLEFNETGIHGWGLAHAQKRGGGKNLKELSLFKCPLDGMGAKAIGNFKSVEKLVLGE 294
Query: 151 TTFINEREAFLYIETSL--LSFLDVSNS----SLSRFCFLTQMKALEHLDLSS-SMIGDD 203
+++ E + + + L +L+ S + F L K LE L + S IGDD
Sbjct: 295 IPQLDD-EGLMTMVRGMKNLKYLNCSKTPSLFGTLGFKALLGSKDLEELHIGECSRIGDD 353
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+V + + NL+ L + T S+ G+ LA LP+ +I
Sbjct: 354 AVPFIKKM-KNLKILRVHGTSISARGMAELALALPDTKI 391
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 33/180 (18%)
Query: 85 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNEN 139
S V++ A + +L L L+ T VT K+ + +LE L LS+ +D +
Sbjct: 100 STVTSAAFASISKLSKLRQLRLSSTRVTNEACEKIAELPALEVLILSDTVVDDV-----G 154
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSS 197
A L+++S L L++S L+R F + ALE+L++
Sbjct: 155 VAALSRLSN-------------------LKSLELSRCHLTRAGFQAIGAFPALEYLEIRR 195
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
+ + D S+++V C L +L LSN + G+ L G LP +E+L + T I + +++
Sbjct: 196 TNLDDVSLDLV-CNAKTLVSLRLSNNPITDQGLDAL-GKLPGIEVLEFNETGIHGWGLAH 253
>gi|104647033|gb|ABF74140.1| disease resistance protein [Arabidopsis thaliana]
Length = 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPXXICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|423404057|ref|ZP_17381230.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|423475313|ref|ZP_17452028.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
gi|401647264|gb|EJS64873.1| hypothetical protein ICW_04455 [Bacillus cereus BAG2X1-2]
gi|402436415|gb|EJV68446.1| hypothetical protein IEO_00771 [Bacillus cereus BAG6X1-1]
Length = 752
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|30019482|ref|NP_831113.1| internalin [Bacillus cereus ATCC 14579]
gi|29895026|gb|AAP08314.1| Internalin [Bacillus cereus ATCC 14579]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + ++ V L+ +L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITN--VAPLS-NLKNVTYLTLAGNQIEDIKPLYTLPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+Q++ + + +T L + L+ LNL ++ D T PLS+ L L L
Sbjct: 393 QLNQLQELWIGKNEITDVTPLSKMTQLKILNLPNNELKDIT--PLSSLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S+L KL LS IRD
Sbjct: 451 ISDLS--PVSNLKKLVFLSFVANEIRD 475
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSNLKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L L ++D VLT
Sbjct: 368 KPLYTLPLKDLVLT 381
>gi|170758424|ref|YP_001787104.1| hypothetical protein CLK_1164 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405413|gb|ACA53824.1| leucine rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 1359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 71/410 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 124 NLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LSNC T ++ L N + L+ I + G +NE + L +L ++N+++
Sbjct: 468 DLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSIANTNV 524
Query: 179 SRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRNLNLSN 222
L + L LD++ +IG++ V V +R L
Sbjct: 525 VNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIREL---- 580
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 280
++ I L ++ L LSG I D + + M +L ++D+SN +I I++
Sbjct: 581 --INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNIDSIKK 636
Query: 281 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNAS 333
+ LVL S+ +++L LE L+L + D T L +L L L RN
Sbjct: 637 LINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI 694
Query: 334 LTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 366
++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 695 VSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGVSNF 742
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 174/366 (47%), Gaps = 59/366 (16%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLINL 706
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 133
+YL L+ +++S R ++ K++ L L L +GV+ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISEREESLKKLY-NLRELYLKNSGVSNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 134 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 765 VFDEKLDSDLAKIIREILGK---DENTNIYKSEVDTITDIDLSEDTISKLNISSKL---- 817
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 246
++++I D ++ + NL ++NL G G L G L L L L
Sbjct: 818 ---TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLDLQ 863
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+L
Sbjct: 864 GREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLDLS 910
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
+T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ + S
Sbjct: 911 RTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDITSI 962
Query: 367 KPPRSL 372
R+L
Sbjct: 963 YALRNL 968
>gi|170754542|ref|YP_001782739.1| internalin [Clostridium botulinum B1 str. Okra]
gi|429246424|ref|ZP_19209744.1| internalin [Clostridium botulinum CFSAN001628]
gi|169119754|gb|ACA43590.1| leucine-rich repeat protein [Clostridium botulinum B1 str. Okra]
gi|428756514|gb|EKX79066.1| internalin [Clostridium botulinum CFSAN001628]
Length = 364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ LSSL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 -SNCTID--SILEGNENKAPLAKISLAGTTF-----INEREAF--LYI------------ 163
+N ID IL + L ++LAG F IN+ ++ LYI
Sbjct: 199 HNNGVIDFKPILRMQQ----LTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLK 254
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
S L LDVSN+ + ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMSNLKVLDVSNNKIMDMNSISNLNGIEELNISSNYIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|332238073|ref|XP_003268227.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Nomascus
leucogenys]
Length = 735
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 61/314 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 57
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 58 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG---------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTL 363
Query: 92 -----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAK 145
A+++ R++ +L +TG P+IS LS C + I EGN +
Sbjct: 364 TDNCVKALVEKCSRIT--SLVFTGA---PHISDCTFKALSTCKLRKIRFEGNR------R 412
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDS 204
++ A FI++ Y S + D + S L+ +K L L+L++ + IGD
Sbjct: 413 VTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMG 468
Query: 205 VEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSM 260
++ +R LNLSN + S A V L+ PNL LSL + + I Y+
Sbjct: 469 LKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVN 528
Query: 261 MPSLKFIDISNTDI 274
+ SL ID+S TDI
Sbjct: 529 IFSLVSIDLSGTDI 542
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 159/367 (43%), Gaps = 50/367 (13%)
Query: 47 LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
+S +NL L++ P TD +R + + + YL+L + ++NR +++ PR F
Sbjct: 241 VSHCRNLQELNVSDCPTFTDESMRHISEGCLGVLYLNLSNTTITNR---TMRLLPR-HFH 296
Query: 105 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
NL N+S C ++ + + GN L + L+G T I+ + F YI
Sbjct: 297 NLQ--------NLSLAYCRRFTDKGLQYLNLGN-GCHKLIYLDLSGCTQISV-QGFRYIA 346
Query: 165 TSLLSFLDVSNS---SLSRFCFLTQMKAL-EHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
S + ++ + +L+ C +KAL E +S++ + + C L L
Sbjct: 347 NSCTGIMHLTINDMPTLTDNC----VKALVEKCSRITSLVFTGAPHISDCTFKALSTCKL 402
Query: 221 SNTRF------SSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT- 272
RF + A + + PNL + ++ + I D ++ +S + L ++++N
Sbjct: 403 RKIRFEGNRRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCV 462
Query: 273 ---DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHL 327
D+ G Q + + + LNL Q+SDA++ LS L +L
Sbjct: 463 RIGDM-GLKQFLDGPASI-----------RIRELNLSNCVQLSDASVMKLSERCPNLNYL 510
Query: 328 SLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
SLRN LT + + ++ L ++ + ++N GL + LK L + + +T+D
Sbjct: 511 SLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRHKKLKELSVSECYRITDD 570
Query: 387 AILQFCK 393
I FCK
Sbjct: 571 GIQAFCK 577
>gi|434374368|ref|YP_006609012.1| internalin [Bacillus thuringiensis HD-789]
gi|401872925|gb|AFQ25092.1| internalin [Bacillus thuringiensis HD-789]
Length = 760
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 RPLYSLPLKDLVLTRNNV 385
>gi|332238077|ref|XP_003268229.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 3 [Nomascus
leucogenys]
Length = 707
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 61/314 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLW--LSETGLTADGIALL----SSLQNLSVLD 57
L+EL++S C TD M+H +S L L+ LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRH-ISEGCLGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAY 305
Query: 58 LGGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG---------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 306 CRRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTINDMPTL 363
Query: 92 -----AAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAK 145
A+++ R++ +L +TG P+IS LS C + I EGN +
Sbjct: 364 TDNCVKALVEKCSRIT--SLVFTGA---PHISDCTFKALSTCKLRKIRFEGNR------R 412
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDS 204
++ A FI++ Y S + D + S L+ +K L L+L++ + IGD
Sbjct: 413 VTDASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMG 468
Query: 205 VEMV--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSM 260
++ +R LNLSN + S A V L+ PNL LSL + + I Y+
Sbjct: 469 LKQFLDGPASIRIRELNLSNCVQLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVN 528
Query: 261 MPSLKFIDISNTDI 274
+ SL ID+S TDI
Sbjct: 529 IFSLVSIDLSGTDI 542
>gi|170757260|ref|YP_001781332.1| hypothetical protein CLD_2856 [Clostridium botulinum B1 str. Okra]
gi|169122472|gb|ACA46308.1| leucine rich repeat protein [Clostridium botulinum B1 str. Okra]
Length = 1359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 183/410 (44%), Gaps = 71/410 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNTHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 124 NLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LSNC T ++ L N + L+ I + G +NE + L +L ++N+++
Sbjct: 468 DLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSIANTNV 524
Query: 179 SRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRNLNLSN 222
L + L LD++ +IG++ V V +R L
Sbjct: 525 VNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIREL---- 580
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 280
++ I L ++ L LSG I D + + M +L ++D+SN +I I++
Sbjct: 581 --INNYSEPIYKRQLLSITKLELSGRGIVD--LQGLESMENLIYLDLSNNEISNIDSIKK 636
Query: 281 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNAS 333
+ LVL S+ +++L LE L+L + D T L +L L L RN
Sbjct: 637 LINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI 694
Query: 334 LTDVSLHQL-----------------SSLSKLTNLSIRDAVLTNSGLGSF 366
++ SL L SL KL NL R+ L NSG+ +F
Sbjct: 695 VSINSLGGLINLQYLSLYENKISEREESLKKLYNL--RELYLKNSGISNF 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 59/366 (16%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSINSLGGLINL 706
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 133
+YL L+ +++S R ++ K++ L L L +G++ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISEREESLKKLY-NLRELYLKNSGISNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 134 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 765 VFDEKLDSDLAKIIREILGK---DENTNIYKSEVDTITDIDLSEDTISKLNISSKL---- 817
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 246
++++I D ++ + NL ++NL G G L G L L L L
Sbjct: 818 ---TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLENLMPLRGLIKLDLQ 863
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+L
Sbjct: 864 GREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLDLS 910
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
+T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ + S
Sbjct: 911 RTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDITSI 962
Query: 367 KPPRSL 372
R+L
Sbjct: 963 YALRNL 968
>gi|320169501|gb|EFW46400.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
Length = 1286
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 165/388 (42%), Gaps = 35/388 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++TD +S L +L+L+ L++ + L L L L +T +
Sbjct: 120 RLTDISANAFTGLSALSQLFLNNNRLSSVPAGAFAGLPALKQLQLNSNRITSISATLFTG 179
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP--NISSLECLNLSNCTID 131
LT L +L L +Q+++ A+V LS L L +T +P + L L+ + +I+
Sbjct: 180 LTALTWLRLEFNQITSIPASVFTDLTGLSVLVLRSNNITSIPPYAFTGLTALSQIDVSIN 239
Query: 132 SILEGNENKAPLAKISLAGTT-------FINEREAF---LYIETSLLSFLDVSNSSLSRF 181
I + + AG T +IN+ + + + L+FL++ N+ L+
Sbjct: 240 LITS-------IPAFAFAGLTAATYLDLYINQITSISDSAFTGLTALTFLNMDNNRLTSI 292
Query: 182 CFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
T + AL++L L S+ + + A + A L +L L + + +S L
Sbjct: 293 LSTTFAGLTALQYLYLWSNQVTSIAPNTFAGLTA-LNSLQLYDNQITSIPANAF-DDLSV 350
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LSL+ I S + + SL+++ + N I ++ A +L
Sbjct: 351 LNTLSLNDNLITSVPASAFANLTSLQYLSLFNNRITS------------IAANAFDDLTA 398
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L L+L ++++ ++ L L L N S+T +S SSLS +T + + D ++
Sbjct: 399 LGSLHLHTNRITNIPSTAFASLSALTQLHLYNNSITSISAGTFSSLSAVTYMYMYDNQIS 458
Query: 360 NSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ +F SLKLL L G + + A
Sbjct: 459 SIPANTFTGMTSLKLLYLSGNQITSVSA 486
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 62/313 (19%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLS 102
I L+ L NL+ L L G + D+ SL LT LE+L+L +Q++ A L+ RL
Sbjct: 132 ICPLTELTNLTELSLEGNQIADV--NSLAELTNLEFLNLENNQITTISPLAELQNLKRLH 189
Query: 103 FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 162
+ T ++ L + +L L+L + I I +PL++ F N + FL
Sbjct: 190 LEDNQITDISSLAGLQNLTWLHLEDNQITDI-------SPLSE-------FTNLKGLFLV 235
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNL 220
+ + + L+Q+ L+ L+L + I D S E+ NL L+L
Sbjct: 236 L------------NQIKDISPLSQLTNLKALELKFNQIQDISPLAEL-----QNLTWLDL 278
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
+ + + + L+G L NL LSL+ QI D +S +S + +LK + ++ I+
Sbjct: 279 EDNQITD--ISPLSG-LTNLTFLSLTYNQIQD--VSPLSGLTNLKRLQLNFNQIQ----- 328
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
++ L L +LE L+L Q++D + PLS + L LSL +TD+
Sbjct: 329 ---------DISPLAELTNLETLSLNGNQITDVS--PLSGLQNLNALSLNGNQITDI--- 374
Query: 341 QLSSLSKLTNLSI 353
S LS LTNL +
Sbjct: 375 --SPLSGLTNLKV 385
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDL 287
L NLE L L G QI D I ++ + +LK++ + I + ++ E +
Sbjct: 93 ELTNLESLHLDGNQITD--ICPLTELTNLKYLTLRRNQITDICPLTELTNLTELSLEGNQ 150
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ + +L L +LE LNLE Q++ T+ PL+ + L L L + +TD+S L+ L
Sbjct: 151 IADVNSLAELTNLEFLNLENNQIT--TISPLAELQNLKRLHLEDNQITDIS--SLAGLQN 206
Query: 348 LTNLSIRDAVLTN-SGLGSFKPPRSLKLL 375
LT L + D +T+ S L F + L L+
Sbjct: 207 LTWLHLEDNQITDISPLSEFTNLKGLFLV 235
>gi|384248839|gb|EIE22322.1| RNI-like protein [Coccomyxa subellipsoidea C-169]
Length = 263
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 100/240 (41%), Gaps = 49/240 (20%)
Query: 38 GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
G TA + L SL L+ L L + V D + LT+L LDL + VS+ G L
Sbjct: 53 GGTALEVGPLLSLTRLASLRLVDMKVGDRDCAGIAALTQLTELDLRATSVSDTGVQGLSR 112
Query: 98 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
RL L++ WT T P +SSL L++ NC + G E +A L T F N R
Sbjct: 113 LLRLHRLDVTWTQATAPPALSSLTNLHMENCWV-----GGE----VALRVLHSTRFPNLR 163
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
E + S+ F D L FC + S+ + ++V C+
Sbjct: 164 E----LHMSMTQFDDAGIELLRAFC------------IDSAPDSSANNDVVKCL------ 201
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM-SMMPSLKFIDISNTDIKG 276
L NL +LSL T+IDD A+ + S+ SL +DIS +I G
Sbjct: 202 -----------------TDLTNLRMLSLKSTEIDDAALPLLQSLKGSLTSLDISGNNITG 244
>gi|125534801|gb|EAY81349.1| hypothetical protein OsI_36521 [Oryza sativa Indica Group]
Length = 692
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 71/416 (17%)
Query: 23 LLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
L+S+ LE L LS L +SSL+NL ++ G+P+T +V L +TKL+Y
Sbjct: 108 LISLEHLEHLDLSNNNLVGPAGRFPRFVSSLRNLIYINFSGMPLTGMVPPQLGNITKLQY 167
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG--- 136
LDL + G + T + L N+ +L L LSN + + +
Sbjct: 168 LDL------SHGIGMYS------------TDIQWLTNLPALRYLGLSNVNLSRVSDWPRV 209
Query: 137 -NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMKALEH 192
N N L + L+G + + ++F + + L LD+S ++ ++ C+ + +L +
Sbjct: 210 VNMNSY-LIVLDLSGCSLTSASQSFSQLNLTRLEKLDLSYNNFNQPLASCWFWNLTSLTY 268
Query: 193 LDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI----LAGHLPNLEILSLSG- 247
LDL +++ + + + A L RFSS G I L +L NLEIL L G
Sbjct: 269 LDLIMNILPGQFPDSLGDMKA------LQVFRFSSNGHSIIMPNLLQNLCNLEILDLGGL 322
Query: 248 --TQIDDYAISYM-SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLN 304
I + S M + ++ + + + +I G + T + L+ L+
Sbjct: 323 SSCNITELLDSLMHCLTKRIRKLYLWDNNITGTLP------------TGVGKFTSLDTLD 370
Query: 305 LEQTQVSDATLFPLSTFKEL--IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L Q++ + + +S L I LSL N + +++ L+ L L +L++
Sbjct: 371 LSHNQLTGSVPYEISMLTSLAKIDLSLNNLT-GEITEEHLAGLKSLKSLNLYYNPYLKIV 429
Query: 363 LG-SFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNG 417
LG + PP L E A C++ P W + V I S G
Sbjct: 430 LGDEWLPPFRL------------EVARFGSCQLGPMFPSWLQWMVNIKELDIWSTG 473
>gi|391335820|ref|XP_003742286.1| PREDICTED: chaoptin-like [Metaseiulus occidentalis]
Length = 1341
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 147/346 (42%), Gaps = 47/346 (13%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L LS++GL + L L VLDL G P+ VLR L L++L L L + S
Sbjct: 658 LQSLNLSDSGLNSIENGAFDGLTGLEVLDLSGNPIK--VLR-LSGLSQLRLLRLASTSPS 714
Query: 89 NRGAAVLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNCTIDSILEGNENKA 141
+ L L+L+ + + PN +SSL L + I S+ +G N
Sbjct: 715 KLAEGLFDKMTSLEELDLSASHIN--PNRVGLFERLSSLHTLRAGHNNISSLRQGLLNAL 772
Query: 142 PLAKISLAGT--TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
PL ++SL G T I +ET L+ +N ++ R L ALE LDLSS++
Sbjct: 773 PLREVSLEGNSLTAIPTESINAQVETLRLA---GNNITILRSGCLKGFNALERLDLSSNL 829
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
IG + ++ G LR L+LS+ R + LP + +G + D + S
Sbjct: 830 IGSINNDVFDESG--LRFLDLSSNRLRT---------LPYHLFRNTTGLEQLDLDANDFS 878
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH----------LERLNLEQTQ 309
+P N + G + Q+G L LS + + LE L+L
Sbjct: 879 YIP--------NAIVDGAV-QMGKLRVLKLSRNPMTRVREDFASGGLLPALEELDLSFGN 929
Query: 310 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
VS + +F EL L+ + + VS L L +L +L + D
Sbjct: 930 VSILATNDMHSFPELTLLTFAHNRINKVSPGALRPLRRLVSLDLSD 975
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 50/304 (16%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LD + + D + L + L+ LS L + A L+ L L L +T+L
Sbjct: 567 LDGNNVADIEDGAFETLAECTFLD---LSGNRLKSLRAAQFRGLRALEELSLQRNNLTNL 623
Query: 67 VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLE 121
S LT+L L+L +Q+ GA P L LNL+ +G+ + N ++ LE
Sbjct: 624 AKGSFSFLTRLRLLNLAHNQLGAIGADTFGPMPGLQSLNLSDSGLNSIENGAFDGLTGLE 683
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
L+LS GN P+ + L+G + + LL S S L+
Sbjct: 684 VLDLS---------GN----PIKVLRLSGLS-----------QLRLLRLASTSPSKLAEG 719
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
F +M +LE LDLS+S I + V + + ++L L + SS G+L LP E
Sbjct: 720 LF-DKMTSLEELDLSASHINPNRVGLFERL-SSLHTLRAGHNNISSLRQGLLNA-LPLRE 776
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
+ SL G + AI S+ ++ + ++ +I +L L+ N LE
Sbjct: 777 V-SLEGNSLT--AIPTESINAQVETLRLAGNNIT------------ILRSGCLKGFNALE 821
Query: 302 RLNL 305
RL+L
Sbjct: 822 RLDL 825
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 159 AFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
AFL +E SLLS L +SN L + +KAL L+L S+ I D VE + G L+
Sbjct: 120 AFLGLENSLLS-LTISNCDLKELPRGAIKNVKALRSLELDSNSIVD--VESYSFYGLQLK 176
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
+L L N + TQ+ ++A + + SL+ +++SN +
Sbjct: 177 SLMLHNNQI----------------------TQLAEFA--FGGLESSLEDLNLSNNRLPL 212
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
F AL+ L L+ L L + D L+ F L + L LT
Sbjct: 213 F------------PFMALRRLQALKVLKLVGNLIVDIIDDGLTRFINLHTVDLSQNRLTS 260
Query: 337 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
++ L+S+ +L +LS+ ++ G+F+ R ++ LDL
Sbjct: 261 LTNRSLASMPRLRSLSLYQNEISLVANGTFEHSREIESLDL 301
>gi|320170313|gb|EFW47212.1| protein tyrosine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 1198
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 146/349 (41%), Gaps = 59/349 (16%)
Query: 28 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 87
TLE+L LS TG+T+ + S L L L L +T + + L+ L +L L GS +
Sbjct: 66 TLEQLSLSNTGITSVPVNAFSQLTKLEFLSLAYTAITSIASGAFTNLSHLTFLGLSGSLL 125
Query: 88 SNRGAAVLKMFPRLSFLNL-----------AWTGVTKL-------PNISSLECLNLSNCT 129
N A P L L L AWTG+T L P +S++ S T
Sbjct: 126 VNLPAGAFNGAPNLELLYLAETKLTAIPSSAWTGLTALRYLYIDSPQLSTISANAFSGLT 185
Query: 130 -IDSILEGN-----------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+ ++L GN E L +SL G + + + ++ L LD+SN++
Sbjct: 186 ALTTLLVGNPAYRYISPNAFEGLPALRTLSLTGCSITSLSDG-IFNGLDELETLDMSNTA 244
Query: 178 LS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
++ F LT ++ L S I + ++L +L LS T +S G
Sbjct: 245 VTILPADAFAGLTALQDLLLDGSSLLSI----PTQIFPALSSLESLTLSGTNITSIGPNA 300
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
G L +L L LS TQI A + + +PSL+ + +SN+ I V
Sbjct: 301 FVG-LSSLTTLDLSNTQIASIAPNAFAGLPSLRSLRLSNSPITSLPPNV----------- 348
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS---LRNASLTDVS 338
L L+ L+L+ T + T P F+ L +L+ L+N + D S
Sbjct: 349 -FSTLTQLQTLSLQATSL---TTLPPGLFQGLFNLATVQLQNNNFDDNS 393
>gi|54294508|ref|YP_126923.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
gi|53754340|emb|CAH15819.1| hypothetical protein lpl1579 [Legionella pneumophila str. Lens]
Length = 464
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 134/324 (41%), Gaps = 41/324 (12%)
Query: 11 RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRS 70
R + D G K L + +L L LS + A+G L++ Q+LS L+L + D ++
Sbjct: 76 RANNIGDEGAKALAANQSLSTLNLSYNNIGAEGAKALAANQSLSTLNLRANNIGDEGAKA 135
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNL 125
L L L+L + + + GA L LS LNL G L SL LNL
Sbjct: 136 LAANQSLSTLNLRYNNIGDEGAKALAANQSLSTLNLRNNNIGDEGAKALAANQSLSTLNL 195
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 185
S I + EG KA A SL + +N R + E + L
Sbjct: 196 SYNNIRA--EG--AKALAANQSL---STLNLRYNNIRAEGA---------------KALA 233
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
++L L+LS + IGD+ + +A +L LNLS G LA + L L+L
Sbjct: 234 ANQSLSTLNLSYNNIGDEGAKALAA-NQSLSTLNLSYNNIGDEGAKALAANQS-LSTLNL 291
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
S I D ++ SL +++S +I+ GA+ +L A Q L LNL
Sbjct: 292 SYNNIGDEGAKALAANQSLSTLNLSYNNIRA----EGAK-----ALAANQ---SLSTLNL 339
Query: 306 EQTQVSDATLFPLSTFKELIHLSL 329
+ D L+ + L L+L
Sbjct: 340 SYNNIGDEGAKALAANQSLSTLNL 363
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G K L + +L L LS + A+G L++ Q+LS L+L + D ++L
Sbjct: 296 IGDEGAKALAANQSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNIGDEGAKALAAN 355
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
L L+L + + GA L LS LNL++ +
Sbjct: 356 QSLSTLNLSYNNIRAEGAKALAANQSLSTLNLSYNNI 392
>gi|91088789|ref|XP_968000.1| PREDICTED: similar to CG5195 CG5195-PA [Tribolium castaneum]
gi|270011625|gb|EFA08073.1| hypothetical protein TcasGA2_TC005669 [Tribolium castaneum]
Length = 506
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 13/279 (4%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+K LDL+ + + K + + L++L L+ + + + ++ ++ +DL +
Sbjct: 91 IKNLDLTNSL-IETVRQKAFVGLIFLQRLILANNAIKSIYPGTFTGVKKITYVDLENNSI 149
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----NISS 119
+ L L LE L+L +++ + + L L+L++ + + N++S
Sbjct: 150 SILSDDGFLELINLEELNLRHNEIKSIATSAFNGLVHLQELDLSYNAIGDINGVFNNLTS 209
Query: 120 LECLNLSNCTIDSILEGNE--NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
L L+LS I S+L G E N L +I I A + S L LD+S ++
Sbjct: 210 LRLLDLSYNKI-SVLTGKEFDNLTSLLEIRFK-FNHITTIPASEFYSMSRLRRLDLSFNA 267
Query: 178 LS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG 235
+S R + ALE LDL ++ + + + + + NL+ LN SN R S G+ +G
Sbjct: 268 ISGVRAGSFKGLHALEILDLGNNAVAEVPQKTLQSL-HNLQYLNFSNNRLSIFQTGLYSG 326
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
LP L +L+ S I+D I+ + + SL +D S +I
Sbjct: 327 -LPQLRVLNFSHNVIEDIEITGVFSLDSLDTLDFSFNNI 364
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+T S+S L +L LS ++ L L +LDLG V ++ ++LQ L
Sbjct: 244 ITTIPASEFYSMSRLRRLDLSFNAISGVRAGSFKGLHALEILDLGNNAVAEVPQKTLQSL 303
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
L+YL+ +++S + P+L LN + +T + ++ SL+ L+ S
Sbjct: 304 HNLQYLNFSNNRLSIFQTGLYSGLPQLRVLNFSHNVIEDIEITGVFSLDSLDTLDFSFNN 363
Query: 130 IDSI 133
I ++
Sbjct: 364 ISNV 367
>gi|75759331|ref|ZP_00739428.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228900010|ref|ZP_04064246.1| Internalin [Bacillus thuringiensis IBL 4222]
gi|74493163|gb|EAO56282.1| Internalin protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228859624|gb|EEN04048.1| Internalin [Bacillus thuringiensis IBL 4222]
Length = 766
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IRPLYSLP-LKDLVLTRNNVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 440 --PLSSLVNLQKLDLEANYITD 459
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 374 RPLYSLPLKDLVLTRNNV 391
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N++ +E L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|104647001|gb|ABF74124.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|44888783|gb|AAS48164.1| LRR protein WM1.10 [Aegilops tauschii]
Length = 1060
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 154/371 (41%), Gaps = 58/371 (15%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG----SQVSNRGAAVLKMFPRL 101
LL S+ NL L+L G+P T V L L+K++YLDL S + + L P L
Sbjct: 144 LLGSMGNLRYLNLSGIPFTGRVPSHLGNLSKMQYLDLGQAGDYSDMYSMDITWLTKLPFL 203
Query: 102 SFLNLAW---TGVTKLPN----ISSLECLNLSNCTIDSILEG--NENKAPLAKISLAGTT 152
FL ++ +G+ P+ I L ++LS C +DS + + N L K+ L+
Sbjct: 204 KFLGMSGVNLSGIADWPHTLNMIPPLRVIDLSYCLLDSANQSLLHLNLTKLEKLDLSWNF 263
Query: 153 FINEREA----------FLYIETSL--------------LSFLDVS---NSSLSRFCFLT 185
F + + +L++E +L L LD+S N + +
Sbjct: 264 FKHSLGSGWFWKVTSLKYLHLEWNLLFGKFPDTLGNMTYLRVLDISYNGNPDMMMTGNIK 323
Query: 186 QMKALEHLDLSSSMIGDDSVEMVA-----CVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
++ +LE LDLS + I D + C NL+ L+LS F+ I++ L
Sbjct: 324 KLCSLEILDLSGNRINGDIESLFVESLPQCTRKNLQKLDLSYNNFTGTLPNIVS-DFSKL 382
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI-QQVGAET----------DLVL 289
ILSLS + + + + L +D+ + G I ++GA T DL
Sbjct: 383 SILSLSNNNLVGPIPAQLGNLTCLTSLDLFWNHLNGSIPPELGALTTLTSLDLSMNDLTG 442
Query: 290 SLTA-LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
S+ A L NL +L L L ++ L L HL L + L ++ SL+ L
Sbjct: 443 SIPAELGNLRYLSELCLSDNNITAPIPPELMNSTSLTHLDLSSNHLNGSVPTEIGSLNNL 502
Query: 349 TNLSIRDAVLT 359
L + + T
Sbjct: 503 IYLYLSNNRFT 513
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 42/309 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+TCL LDL + + L +++TL L LS LT A L +L+ LS L L
Sbjct: 403 LTCLTSLDL-FWNHLNGSIPPELGALTTLTSLDLSMNDLTGSIPAELGNLRYLSELCLSD 461
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA---WTGVT---KL 114
+T + L T L +LDL + ++ + L +L L+ +TGV
Sbjct: 462 NNITAPIPPELMNSTSLTHLDLSSNHLNGSVPTEIGSLNNLIYLYLSNNRFTGVITEENF 521
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLA-------------------------KISLA 149
N++SL+ ++LS + +L + +AP + ++
Sbjct: 522 ANLTSLKDIDLSFNNLKIVLNSDW-RAPFTLEFASFASCQMGPLFPPGLQRLKTNALDIS 580
Query: 150 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK--ALEHLDLSSSMIGDDSVEM 207
TT E + + S ++LD+SN+ +S M A E L L S+ +
Sbjct: 581 NTTLKGEIPDWFWSTFSNATYLDISNNQISG-SLPAHMHSMAFEKLHLGSNRL----TGP 635
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+ + N+ L++SN FS L LEILS+ QI Y + + L ++
Sbjct: 636 IPTLPTNITLLDISNNTFSETIPSNLGAS--RLEILSMHSNQIGGYIPESICKLEQLLYL 693
Query: 268 DISNTDIKG 276
D+SN ++G
Sbjct: 694 DLSNNILEG 702
>gi|229172068|ref|ZP_04299633.1| Internalin [Bacillus cereus MM3]
gi|228611411|gb|EEK68668.1| Internalin [Bacillus cereus MM3]
Length = 758
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
+ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVNMDNLASLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 440 PLSNLVNLQKL 450
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 56/193 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ ++ F +K L HL L G++ ++ V NL +L+LSN + +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALR----GNEFSDVTPLVNMDNLASLDLSNNKIT 305
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ + + N++ L LSG QI+D
Sbjct: 306 NVAPLV---EMKNVKSLYLSGNQIED---------------------------------- 328
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 ----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDIK 374
Query: 347 KLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 375 PLYSLPLKDLVLT 387
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N++ +E L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|255030546|ref|ZP_05302497.1| hypothetical protein LmonL_18171 [Listeria monocytogenes LO28]
Length = 400
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 37/298 (12%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L G+T+ I L +L L LDL +T + + L +L YLD+ + ++
Sbjct: 106 LKTLTLDGCGITS--IGTLDNLPKLEKLDLKENQITSI--SEITDLPRLSYLDVSVNNLT 161
Query: 89 NRGAAVLKMFPRLSFLNLA---WTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK 145
G LK P L +LN++ + V+ L N SL +N+SN I ++ G + P K
Sbjct: 162 TIGD--LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV--GKMTELPSLK 217
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV 205
A I++ + L +D SN+ ++ + L+ LD+ S+ I SV
Sbjct: 218 EFYAQNNSISDISMIHDMPN--LRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSV 275
Query: 206 --------------EMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
++ +G NL +L N F+ G LPNLE L +S
Sbjct: 276 IHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNN 335
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
++ M +P L+ +D+ N ++ G E + L++L +L +L LNL
Sbjct: 336 SYLRSLGTMDGVPKLRILDLQN----NYLNYTGTEGN----LSSLSDLTNLTELNLRN 385
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 32/304 (10%)
Query: 93 AVLKMFPRLSFL----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAP-LAKIS 147
L P+L L N T +T + ++ L+ L L C I SI G + P L K+
Sbjct: 75 GTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLD 132
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
L + E + LS+LDVS ++L+ L ++ LE L++SS+ + D S
Sbjct: 133 LKENQITSISE---ITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVST-- 187
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
+L +N+SN + G LP+L+ I D IS + MP+L+ +
Sbjct: 188 -LTNFPSLNYINISNNVIRTVGK---MTELPSLKEFYAQNNSISD--ISMIHDMPNLRKV 241
Query: 268 DISN---TDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
D SN T+I F +Q + ++ + S + + +L LE N + +++ +
Sbjct: 242 DASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITN-----IG 296
Query: 320 TFKELIHLSLRNASLTDV-SLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
T L L+ N S + SL + L L L + D LG+ L++LDL
Sbjct: 297 TMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQ 356
Query: 379 GGWL 382
+L
Sbjct: 357 NNYL 360
>gi|365824233|gb|AEX01718.1| toll-like receptor 3 [Epinephelus coioides]
Length = 920
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 170/387 (43%), Gaps = 51/387 (13%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL----GGL 61
EL + V++ + + L + TL + + LT D L SL+ L + + +
Sbjct: 296 ELSGNGMVRIEEGSFRWLSRLQTLILVDNNIKHLTKDTFQGLKSLEKLQLTNALASSHPI 355
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
P+ D S Q L+ LE L L + V N L L+++W+ T L NIS+
Sbjct: 356 PIIDDF--SFQPLSALESLILQRTAVRNITEHTFTGLTSLKELDMSWSSYTSLRNISNKT 413
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
++L+ +PL K++L GT A I+ S L + L +
Sbjct: 414 FISLAG-------------SPLRKLNLTGT-------AIAQIDPRSFSVLRNLTTLLLDY 453
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
F+ Q E + G D VE + + N + +NLS+ F + +P+L
Sbjct: 454 NFIKQNLTGEEFE------GLDQVEQIY-MSNNHQKVNLSSDSFVN---------VPSLR 497
Query: 242 ILSLSGTQIDDYAI----SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
+L+L + I + AI S +P+L ++D+SN +I I++ E + L + LQ+
Sbjct: 498 VLTLGRSLIAE-AINCDPSPFRHLPNLTYLDLSNNNIAN-IRENTFEGLVNLKVLKLQH- 554
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
N+L RL + + LF +T + LI L L + L ++ L LS L NLS+ +
Sbjct: 555 NNLARL-WKSANLGGPVLFLKNTPRLLI-LDLDSNGLDEIPAEALRGLSDLHNLSLASNL 612
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLT 384
L + F +SL+ L+L + T
Sbjct: 613 LNSLQEFIFDDLKSLRFLNLQKNLITT 639
>gi|228907061|ref|ZP_04070925.1| Internalin [Bacillus thuringiensis IBL 200]
gi|228852565|gb|EEM97355.1| Internalin [Bacillus thuringiensis IBL 200]
Length = 766
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-KQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMKQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L+ ++ LE L LS +T +A L+ ++N+ L L G + D+ +L + +L+YL+L
Sbjct: 288 LVKMNNLESLDLSNNKIT--NVAPLTEMKNVKTLYLSGNQIEDVT--ALAKMKQLDYLNL 343
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNL---SNCTIDSILEGNEN 139
+++ N A L +++L LA + + + SL +L N D L G +
Sbjct: 344 ANNKIKN--VAPLSALKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNNVKD--LSGIDQ 399
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
L K+ G I ++ + + L+ LD+ N+ L L+ + L+ LDL ++
Sbjct: 400 MNQLNKL-FVGKNQI--KDVTPLAKMTQLTELDLPNNELKDITPLSSLVNLQKLDLEANY 456
Query: 200 IGD 202
I D
Sbjct: 457 ISD 459
>gi|290980071|ref|XP_002672756.1| predicted protein [Naegleria gruberi]
gi|284086335|gb|EFC40012.1| predicted protein [Naegleria gruberi]
Length = 385
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 24/276 (8%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD++R ++ G K + + L L + + A+G +S ++ L+ LD+GG
Sbjct: 89 MKHLTSLDINRN-QIGVEGAKSISRMKQLTSLNIYYNQIGAEGAKSISGMKQLTSLDIGG 147
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNIS 118
+ + + + +L LD++ +Q+ GA + +L+ LN+ + GV IS
Sbjct: 148 NQIGVEESKYISEMKQLTSLDIYNNQIGVEGAKSISGMKQLTSLNIGFNRIGVEGSKLIS 207
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
E L++ I S NE I + G+ FI E + TSL + +
Sbjct: 208 --EMKQLTSLNIGS----NE-------IGVEGSKFIPEMKHL----TSLNIYYNEIGDEG 250
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
S+ ++++MK L LD+ + IG + + ++ + L +L +S+ + G ++ +
Sbjct: 251 SK--YISEMKQLTSLDIYYNEIGVEGAKYISEM-KQLTSLGISDNQIGVEGAKFIS-EMK 306
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L L ++ QI D ++S M SL +++++ I
Sbjct: 307 LLTSLDIADNQIGDEGSKFISEMKSLTSLNVNSNQI 342
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
+ F+++MK L LD++ + IGD+ + ++ + +L +LN+ + G +++G + +
Sbjct: 10 KLKFISEMKHLTSLDIADNQIGDEGSKFISGM-KHLTSLNIDRNQIGVEGAKLISG-MKS 67
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L LS+ QI +S M L +DI+ Q+G E ++ +
Sbjct: 68 LISLSIGDNQIGVEGAKLISGMKHLTSLDINRN-------QIGVE-----GAKSISRMKQ 115
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L LN+ Q+ +S K+L L + + +S + +LT+L I + +
Sbjct: 116 LTSLNIYYNQIGAEGAKSISGMKQLTSLDIGGNQIGVEESKYISEMKQLTSLDIYNNQIG 175
Query: 360 NSGLGSFKPPRSLKLLDL 377
G S + L L++
Sbjct: 176 VEGAKSISGMKQLTSLNI 193
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 162/381 (42%), Gaps = 43/381 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD++ ++ D G K + + L L + + +G L+S +++L L +G
Sbjct: 17 MKHLTSLDIADN-QIGDEGSKFISGMKHLTSLNIDRNQIGVEGAKLISGMKSLISLSIGD 75
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNIS 118
+ + + + L LD+ +Q+ GA + +L+ LN+ + G +IS
Sbjct: 76 NQIGVEGAKLISGMKHLTSLDINRNQIGVEGAKSISRMKQLTSLNIYYNQIGAEGAKSIS 135
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
++ L ++D + GN+ I + + +I+E + L+ LD+ N+ +
Sbjct: 136 GMKQL----TSLD--IGGNQ-------IGVEESKYISEMKQ--------LTSLDIYNNQI 174
Query: 179 S--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
++ MK L L++ + IG + ++++ + L +LN+ + G +
Sbjct: 175 GVEGAKSISGMKQLTSLNIGFNRIGVEGSKLISEM-KQLTSLNIGSNEIGVEGSKFIP-E 232
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ +L L++ +I D Y+S M L +DI + ++G E +S
Sbjct: 233 MKHLTSLNIYYNEIGDEGSKYISEMKQLTSLDI-------YYNEIGVEGAKYIS-----E 280
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ L L + Q+ +S K L L + + + D +S + LT+L++
Sbjct: 281 MKQLTSLGISDNQIGVEGAKFISEMKLLTSLDIADNQIGDEGSKFISEMKSLTSLNVNSN 340
Query: 357 VLTNSG---LGSFKPPRSLKL 374
+ + G + K SLK+
Sbjct: 341 QIGDEGAKLISGMKQLTSLKI 361
>gi|104646925|gb|ABF74086.1| disease resistance protein [Arabidopsis thaliana]
gi|104646929|gb|ABF74088.1| disease resistance protein [Arabidopsis thaliana]
gi|104646935|gb|ABF74091.1| disease resistance protein [Arabidopsis thaliana]
gi|104646951|gb|ABF74099.1| disease resistance protein [Arabidopsis thaliana]
gi|104646959|gb|ABF74103.1| disease resistance protein [Arabidopsis thaliana]
gi|104646961|gb|ABF74104.1| disease resistance protein [Arabidopsis thaliana]
gi|104646983|gb|ABF74115.1| disease resistance protein [Arabidopsis thaliana]
gi|104646989|gb|ABF74118.1| disease resistance protein [Arabidopsis thaliana]
gi|104647017|gb|ABF74132.1| disease resistance protein [Arabidopsis thaliana]
gi|104647023|gb|ABF74135.1| disease resistance protein [Arabidopsis thaliana]
gi|104647027|gb|ABF74137.1| disease resistance protein [Arabidopsis thaliana]
gi|104647035|gb|ABF74141.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|116109772|gb|ABJ74265.1| CG11136-like protein [Drosophila affinis]
Length = 453
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I + + V +
Sbjct: 145 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKIKALGTADFVGLI-- 202
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 203 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 261
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 262 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 310
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 311 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 369
>gi|5739323|gb|AAD50430.1|AF166121_1 Cf2/Cf5 disease resistance protein homolog [Hordeum vulgare subsp.
vulgare]
Length = 893
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADG---IALLSSLQNLSVLDLGGLPV 63
LDLSR + LLS+ L+ L L T L G L SL NL LDL +
Sbjct: 86 LDLSRRFSLVGQISPSLLSLEHLQYLNLKSTSLCGHGGRIPEFLGSLNNLRHLDLSYMSF 145
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN------- 116
+ ++ L L+KLEYLDL ++ + L PRL +L++++T ++ +
Sbjct: 146 SGVLPPQLGNLSKLEYLDLSNMEMDVIDISWLSRLPRLMYLDISYTNLSSIAAWPPVVNM 205
Query: 117 ISSLECLNLSNCTIDSILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
I SL+ L LS C++ S + + N L + L+ F + + + + + +LD+S
Sbjct: 206 IPSLKDLRLSYCSLSSTNQSLTHLNLTNLQHLDLSRNYFAHPIASSWFWNVTSIEYLDLS 265
Query: 175 NSSL 178
++SL
Sbjct: 266 DTSL 269
>gi|116109774|gb|ABJ74266.1| CG11136-like protein [Drosophila pseudoobscura]
Length = 472
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 138 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 195
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 196 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 254
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 255 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 303
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 304 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 362
>gi|104646997|gb|ABF74122.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 169/369 (45%), Gaps = 60/369 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV------LD 57
LK++DLSRC + + + L + LE+L LS + + +L+ LS +
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNCIQ 106
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTK 113
L +P+ ++L+SL+ V G + LK FP +S+ L L+ T + +
Sbjct: 107 LKDIPI-GIILKSLET-------------VGMSGCSSLKHFPEISWNTRRLYLSSTKIEE 152
Query: 114 LPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
LP+ IS L CL ++S+C T+ S L + L ++L G + L T
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLT 209
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTR 224
SL + L+VS L+ F ++E L +S + I + + C + LR+L++S N R
Sbjct: 210 SLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKR 265
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG- 282
+S V I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 266 LASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGN 323
Query: 283 ---------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLS 328
+ T + + ++ L L+ L + + + L PLS F +L LS
Sbjct: 324 LVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALS 383
Query: 329 LRNASLTDV 337
L N ++T++
Sbjct: 384 LSNMNMTEI 392
>gi|384245058|gb|EIE18554.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 731
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 197/454 (43%), Gaps = 66/454 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L LDLS +TDAG+ HL S+S L L L ++ DG+A+ L ++ L L
Sbjct: 222 LTSLTHLDLSGSHDITDAGLLHLGSLSRLRTLVLWNCMRVSVDGLAVFRQLPAVADLSLR 281
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN-LAWTGVTKLPN- 116
G ++D + S+ L +L LDL + A L+ + LS L L G K+ +
Sbjct: 282 GCAQLSDALCGSVAHLEQLTRLDLRACERFT--GAELREWKGLSLLQELNLKGCYKIEDA 339
Query: 117 -------ISSLECLNLSNC--TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 167
++SL +N+ C L + + ++L G I+ E + S
Sbjct: 340 GLQGLSLLTSLTSINMQECWQITAQGLAALSGLSRMMDVNLQGCRKISSLEPLASL--SR 397
Query: 168 LSFLDVSNSSL---SRFCFLTQMKALEHLDLS-------------SSMIGDDSVEMVACV 211
L+ L++ N S L+++ +L LDLS SS+ G ++++ C
Sbjct: 398 LAALNLRNCDGLGDSSLGPLSRLVSLRSLDLSGCTHLTGRGLLPLSSLTGLTALKLQHCA 457
Query: 212 G----ANL---------RNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
G A+L LNLS ++ AG+ LA L L LSL G + +
Sbjct: 458 GIRRSADLAPLSLLTALSTLNLSGCSQEEGAGISSLAT-LTCLRALSLDGWRHVTFIDDG 516
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLF 316
+ + SL+ + N +Q + TD + L A+ ++ L +NL+ Q++
Sbjct: 517 LMALTSLRGVASLN------LQGCTSLTD--VGLAAIGHMTSLTNVNLQDCRQITGEGFA 568
Query: 317 PLSTFKELIHLSLRNASL-TDVSLHQLSSLSKLTNLSIRDA-VLTNSGLGSFKPPRSLKL 374
+ L LSL+NAS+ +D ++ ++ L L++++ LT+ L + P L
Sbjct: 569 GWAGMAHLTSLSLQNASMVSDAGCCAIARITSLRTLNLKNCPALTDDCLAALTPLERLCH 628
Query: 375 LDLHGGWLLTEDAILQFCKMHPRIE------VWH 402
L L G L+ DA L C P ++ WH
Sbjct: 629 LRLQGNQQLS-DAALAHCARMPSLQHLETSNCWH 661
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 153/366 (41%), Gaps = 84/366 (22%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSS-LQNLSVLDLGG---- 60
L+LS C KVTD G+ L ++ L L LS L+ G+A +++ L+ L L LGG
Sbjct: 149 LNLSNCCKVTDGGLLALAALRQLGSLNLSGCVSLSERGLAAIAARLRRLHTLKLGGTSRV 208
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
++D + ++ LT L +LDL GS ++ G+ L ++S L
Sbjct: 209 ATISDASVAAIAGLTSLTHLDLSGSH------------------DITDAGLLHLGSLSRL 250
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L L NC ++S+ G + A + SL +S++
Sbjct: 251 RTLVLWNCM---------------RVSVDGLAVFRQLPAV--ADLSLRGCAQLSDALCGS 293
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L Q+ L ++ AC RF+ A + G L L
Sbjct: 294 VAHLEQLTRL---------------DLRAC------------ERFTGAELREWKG-LSLL 325
Query: 241 EILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
+ L+L G +I+D + +S++ SL I++ Q+ A+ L AL L+
Sbjct: 326 QELNLKGCYKIEDAGLQGLSLLTSLTSINMQE------CWQITAQ-----GLAALSGLSR 374
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAV- 357
+ +NL+ + ++L PL++ L L+LRN L D SL LS L L +L +
Sbjct: 375 MMDVNLQGCR-KISSLEPLASLSRLAALNLRNCDGLGDSSLGPLSRLVSLRSLDLSGCTH 433
Query: 358 LTNSGL 363
LT GL
Sbjct: 434 LTGRGL 439
>gi|290974552|ref|XP_002670009.1| predicted protein [Naegleria gruberi]
gi|284083563|gb|EFC37265.1| predicted protein [Naegleria gruberi]
Length = 445
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 47/346 (13%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-- 104
L L+ L+ LD+ G + + + + + L L++ G+ + N G + +L+ L
Sbjct: 59 LGLLKQLTQLDIDGNNIDEEGAKYISEMQYLAILNMLGNNIGNEGVKYISGMKQLTHLNV 118
Query: 105 ---NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK-------------ISL 148
N+ GV + + L LN+ +I G+E + + IS
Sbjct: 119 SENNIGLDGVKYIVEMKQLTHLNIGQNSI-----GDEGAKLIGEMTQLLDLCIFYCGISS 173
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVE 206
G I++ + L+ L++S++ L +++ M L +L + + IGD+ +
Sbjct: 174 EGIKHISKLDK--------LTDLNISSNMLYDDSTKYISGMNQLTYLRIHDNNIGDEGAK 225
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 266
+ + L +N+ ++ GV L G L L + +S I D Y+S M L
Sbjct: 226 FLGKM-KQLTGINIWRNELTAEGVKFLTG-LDKLTEIDISSNNIGDNGAKYISEMKQLTN 283
Query: 267 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIH 326
+D+S+ +I + GA+ + N+ L L L + + +S ++L
Sbjct: 284 LDVSDNNIG----EEGAK--------YIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTE 331
Query: 327 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSL 372
L + + + +S +S+L L I ++ N G K + L
Sbjct: 332 LDISENHIDEKGAKYISEMSQLNALDISVNIIGNQGAKYIKEMKQL 377
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ + G+K++ + L L +SE + DG+ + ++ L+ L++G + D + + +
Sbjct: 99 IGNEGVKYISGMKQLTHLNVSENNIGLDGVKYIVEMKQLTHLNIGQNSIGDEGAKLIGEM 158
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA----WTGVTK-LPNISSLECLNLSNCT 129
T+L L ++ +S+ G + +L+ LN++ + TK + ++ L L + +
Sbjct: 159 TQLLDLCIFYCGISSEGIKHISKLDKLTDLNISSNMLYDDSTKYISGMNQLTYLRIHDNN 218
Query: 130 IDSILEGNENKAPLAK------ISLAGTTFINEREAFLYIETSL--LSFLDVSNSSL--S 179
I G+E L K I++ E FL T L L+ +D+S++++ +
Sbjct: 219 I-----GDEGAKFLGKMKQLTGINIWRNELTAEGVKFL---TGLDKLTEIDISSNNIGDN 270
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
++++MK L +LD+S + IG++ + + + L L L G ++ L
Sbjct: 271 GAKYISEMKQLTNLDVSDNNIGEEGAKYIGNM-KQLTILTLWKNNIRGEGAKYIS-KLEK 328
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG-----FIQQVGAETDLVL 289
L L +S ID+ Y+S M L +DIS +I G +I+++ TDL++
Sbjct: 329 LTELDISENHIDEKGAKYISEMSQLNALDIS-VNIIGNQGAKYIKEMKQLTDLLI 382
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 29/320 (9%)
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECL 123
+ L +L +L LD+ G+ + GA + L+ LN+ GV + + L L
Sbjct: 57 KKLGLLKQLTQLDIDGNNIDEEGAKYISEMQYLAILNMLGNNIGNEGVKYISGMKQLTHL 116
Query: 124 NLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS----FLDVSNSS 177
N+S N +D + E K L +++ + +E + T LL + +S+
Sbjct: 117 NVSENNIGLDGVKYIVEMK-QLTHLNIGQNSIGDEGAKLIGEMTQLLDLCIFYCGISSEG 175
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
+ ++++ L L++SS+M+ DDS + ++ + L L + + G L G +
Sbjct: 176 IKH---ISKLDKLTDLNISSNMLYDDSTKYISGMNQ-LTYLRIHDNNIGDEGAKFL-GKM 230
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
L +++ ++ + +++ + L IDIS+ +I GA+ + +
Sbjct: 231 KQLTGINIWRNELTAEGVKFLTGLDKLTEIDISSNNIG----DNGAK--------YISEM 278
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L L++ + + + K+L L+L ++ +S L KLT L I +
Sbjct: 279 KQLTNLDVSDNNIGEEGAKYIGNMKQLTILTLWKNNIRGEGAKYISKLEKLTELDISENH 338
Query: 358 LTNSGLGSFKPPRSLKLLDL 377
+ G L LD+
Sbjct: 339 IDEKGAKYISEMSQLNALDI 358
>gi|390335362|ref|XP_003724129.1| PREDICTED: uncharacterized protein LOC100890653 [Strongylocentrotus
purpuratus]
Length = 990
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 53/355 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL--QNLSVLDLGGL 61
L+ L+LS +TD + + S+L L L TG+T G+ ++ NL+ L L
Sbjct: 670 LQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGVTDAGLETFVAVPPPNLTNLSLNRT 729
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL--------NLAWTGVTK 113
VTD+ + L L+KL+ L L +QV + L+ LS L L + K
Sbjct: 730 NVTDMAVLFLARLSKLKNLGLEQTQVKS-----LEHVGHLSQLVSLNVSRNRLQRDALLK 784
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDV 173
L ++ L+ L++S+ ++ I G+E A L G + LS D
Sbjct: 785 LHQVTHLKVLHISH--VEGIT-GDE-----ALTCLQGLQLMQ------------LSLPDR 824
Query: 174 SNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
++ + + M +L +DL+ S I D + +A + +L L+++NT+ +SAG+
Sbjct: 825 HTTTDNGLKCIAGM-SLCSIDLTDYSNITDAGIHHLADM-TSLHKLSITNTKVTSAGMQY 882
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
L+G L L L L T +DD + + L+ + ++ T I TD L
Sbjct: 883 LSG-LTELLELHLDRTLVDDEGAKVIGQLTKLQVLSMAETKI----------TDRFLLSN 931
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ + H+ RLNL +T +S+ + LS L +L+L N T VS+ L+K
Sbjct: 932 VINSCPHISRLNLSRTNISERGITVLS----LPYLTLLNLDYTCVSVDCAQHLTK 982
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV-GILAGHLPNLEI 242
+T +K L+HL+LS++ D V ++L L L T + AG+ +A PNL
Sbjct: 664 ITSLKKLQHLNLSNNKSLTDKVFQTVQEFSSLTTLLLEGTGVTDAGLETFVAVPPPNLTN 723
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL-----------SL 291
LSL+ T + D A+ +++ + LK + + T +K ++ VG + LV +L
Sbjct: 724 LSLNRTNVTDMAVLFLARLSKLKNLGLEQTQVKS-LEHVGHLSQLVSLNVSRNRLQRDAL 782
Query: 292 TALQNLNHLERLNLEQTQ--VSDATLFPLSTFKELIHLSLRN------------------ 331
L + HL+ L++ + D L L +L+ LSL +
Sbjct: 783 LKLHQVTHLKVLHISHVEGITGDEALTCLQGL-QLMQLSLPDRHTTTDNGLKCIAGMSLC 841
Query: 332 -------ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+++TD +H L+ ++ L LSI + +T++G+
Sbjct: 842 SIDLTDYSNITDAGIHHLADMTSLHKLSITNTKVTSAGM 880
>gi|290979617|ref|XP_002672530.1| predicted protein [Naegleria gruberi]
gi|284086107|gb|EFC39786.1| predicted protein [Naegleria gruberi]
Length = 401
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 154 INEREAFLYIETSLLSFL-DVSNSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSV 205
+N R + + L + + D+S ++S F + Q+K L +LD+S ++IGD+ V
Sbjct: 90 VNRRNRIIAFDCQLFNLMKDISTLNVSENTFENGHCKYIGQLKHLTNLDISINLIGDEGV 149
Query: 206 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 265
+ + L NLN+SN G + G + L L+++ I + ++ + L+
Sbjct: 150 GYLRKL-KQLTNLNISNNMIGEKGAQYI-GKMKQLTCLNINSNHIGSEGVKFLKELKELR 207
Query: 266 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
+D+ + +I +VGA+ L+ ++ L HL+ +E ++ + L KEL
Sbjct: 208 TLDM----VYCYIGEVGAKY-----LSEMKQLTHLD---VECNNINGGAKY-LGELKELT 254
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+L+ + L D + LS L LT+L++ + ++ G
Sbjct: 255 YLNAKYNILGD-DVRYLSRLELLTDLNVANNGISAKG 290
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ + G +++ + L L ++ + ++G+ L L+ L LD+ + ++ + L +
Sbjct: 168 IGEKGAQYIGKMKQLTCLNINSNHIGSEGVKFLKELKELRTLDMVYCYIGEVGAKYLSEM 227
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISSLECLNLSNCTI 130
+L +LD+ + + N GA L L++LN + V L + L LN++N
Sbjct: 228 KQLTHLDVECNNI-NGGAKYLGELKELTYLNAKYNILGDDVRYLSRLELLTDLNVAN--- 283
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMK 188
IS G FI+ E + L L++ ++++ + F++QMK
Sbjct: 284 -------------NGISAKGAKFIS--------EMNRLVNLNIGHNNIGKEGAKFISQMK 322
Query: 189 ALEHLDLSSSMIGDDSVEMVA 209
L LD+S + I D+ + ++
Sbjct: 323 KLTCLDISCNSIQDEGAKCIS 343
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
ISTL +SE + L++L+ LD+ + D + L+ L +L L++ +
Sbjct: 110 ISTLN---VSENTFENGHCKYIGQLKHLTNLDISINLIGDEGVGYLRKLKQLTNLNISNN 166
Query: 86 QVSNRGAAVLKMFPRLSFLN-----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENK 140
+ +GA + +L+ LN + GV L + L L++ C I +
Sbjct: 167 MIGEKGAQYIGKMKQLTCLNINSNHIGSEGVKFLKELKELRTLDMVYCYIGEV------- 219
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSM 199
G +++E + L+ LDV ++++ +L ++K L +L+ ++
Sbjct: 220 ---------GAKYLSEMKQ--------LTHLDVECNNINGGAKYLGELKELTYLNAKYNI 262
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
+GDD V ++ + L +LN++N S+ G ++ + L L++ I ++S
Sbjct: 263 LGDD-VRYLSRLEL-LTDLNVANNGISAKGAKFIS-EMNRLVNLNIGHNNIGKEGAKFIS 319
Query: 260 MMPSLKFIDISNTDIK 275
M L +DIS I+
Sbjct: 320 QMKKLTCLDISCNSIQ 335
>gi|260787625|ref|XP_002588853.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
gi|229274023|gb|EEN44864.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
Length = 848
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 151/365 (41%), Gaps = 35/365 (9%)
Query: 1 MTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
+T L LDLS + D HL S L LWL + + + S+L +L LDL
Sbjct: 134 LTSLWWLDLSDNHIADLPDGVFSHLTS---LRYLWLFDNHIAHLPEGVFSNLTSLQGLDL 190
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-- 116
+ DL LT L YL L+ + +++ V L L+L+ + LP+
Sbjct: 191 SDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGV 250
Query: 117 ---ISSLECLNLSNCTIDSILEG-NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
++SL L L + I + EG N L + L+ + + TS L ++
Sbjct: 251 FSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTS-LKWIR 309
Query: 173 VSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
+ N+++S + + L L LS + I D + + + +L L + N +S
Sbjct: 310 LHNNNISSLPTGVFSHLTTLRDLYLSGNHIADLPDGVFSHL-TSLEQLYMFNNNITSLPT 368
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
G+ + HL +L+ LSLS I D S + SL+++ +SN +I L
Sbjct: 369 GVFS-HLTSLQGLSLSDNHIADLPDGVFSHLTSLEWLKLSNNNISS------------LP 415
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS----LRNASLTDVSLHQLSSLS 346
+L L+ LNL+ +S P F L L N D SL+ + + +
Sbjct: 416 TGVFSHLTRLDELNLDNNNISS---LPTGVFSHLTSLQELYIAGNPWRCDCSLYGVMTST 472
Query: 347 KLTNL 351
+L L
Sbjct: 473 RLRGL 477
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 151/360 (41%), Gaps = 23/360 (6%)
Query: 28 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 87
+LE+ +L + +LS L +L LDL + DL LT L YL L+ + +
Sbjct: 112 SLERPYLYTNDIRGLPAGVLSQLTSLWWLDLSDNHIADLPDGVFSHLTSLRYLWLFDNHI 171
Query: 88 SNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSNCTIDSILEG-NENKA 141
++ V L L+L+ + LP+ ++SL L L + I + EG N
Sbjct: 172 AHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVFSNLT 231
Query: 142 PLAKISLAGTTFINEREAFLYIETSL--LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
L + L+ + + TSL L D + L F + + +L+ LDLS +
Sbjct: 232 SLQGLDLSDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVF-SNLTSLQGLDLSDNH 290
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS 259
I D + + + +L+ + L N SS G+ + HL L L LSG I D S
Sbjct: 291 IADLPDGVFSHL-TSLKWIRLHNNNISSLPTGVFS-HLTTLRDLYLSGNHIADLPDGVFS 348
Query: 260 MMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
+ SL+ + + N +I L +L L+ L+L ++D S
Sbjct: 349 HLTSLEQLYMFNNNITS------------LPTGVFSHLTSLQGLSLSDNHIADLPDGVFS 396
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L L L N +++ + S L++L L++ + +++ G F SL+ L + G
Sbjct: 397 HLTSLEWLKLSNNNISSLPTGVFSHLTRLDELNLDNNNISSLPTGVFSHLTSLQELYIAG 456
>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
Length = 1295
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 70/386 (18%)
Query: 4 LKELDLSRC---VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV----- 55
LK++DLSRC V+V D L + LE+L LS + + +L+ LS
Sbjct: 628 LKKMDLSRCKYLVEVPD-----LSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTN 682
Query: 56 -LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTG 110
+ L +P+ ++L+SL+ V G + LK FP +S+ L L+ T
Sbjct: 683 CIQLKDIPIG-IILKSLET-------------VGMSGCSSLKHFPEISWNTRRLYLSSTK 728
Query: 111 VTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLY 162
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 729 IEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQ 785
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS- 221
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 786 NLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISE 841
Query: 222 NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 842 NKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPEN 899
Query: 281 VG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELI 325
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 900 IGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLR 959
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNL 351
LSL N ++T++ +S+ L NL
Sbjct: 960 ALSLSNMNMTEIP----NSIGNLWNL 981
>gi|261334051|emb|CBH17045.1| T. brucei spp.-specific protein [Trypanosoma brucei gambiense
DAL972]
Length = 1399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 179/420 (42%), Gaps = 52/420 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+LS C+++T+ + L + + +E+L L+ GI ++ +L L VL + G+ +
Sbjct: 325 LERLNLSYCIQLTN--INPLSNATAIEELNLNGCRRITRGIGVVWALPKLRVLHMKGVHL 382
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLA-----WTGVTKLPNI 117
++ L S+ L + L + G +L L LN+ +GV L +
Sbjct: 383 SEPSLDSVGTGGSLVKVSL--DNCAGFGDMTLLSSIVTLEELNIQKCADIISGVCCLGTL 440
Query: 118 SSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSN 175
L LN+ I S+ G L +++L T ++ EA I T LS L +
Sbjct: 441 PYLRVLNIKEAHISSLDFTGIGASKSLLQLTLESITGLSNVEALANILTLEKLSLLGCNG 500
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-------------- 221
C L + L+ LDLS + DS+ + CV + +LNLS
Sbjct: 501 IDAGIGC-LGNLPQLKVLDLSGTNTDSDSLRGL-CVSQTIVSLNLSHCWKVTSVFHISAL 558
Query: 222 ---NTRFSSAGVGILAG-----HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
N S + I AG L L + LS T I D IS+ S L +D+S D
Sbjct: 559 ETLNELNLSDCIRINAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCD 618
Query: 274 IKGFIQQVGAET---DLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFK 322
I + T DL L L+ L L L LN++ ++++ + L K
Sbjct: 619 ELFDITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNGK 678
Query: 323 ELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 381
+ L L N L+DV+ LSSLS L L++ SG+G+ L++LDL GW
Sbjct: 679 SFVKLILDNCKGLSDVTF--LSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRVLDL--GW 734
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 197/462 (42%), Gaps = 66/462 (14%)
Query: 7 LDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDL 66
LDLS C ++ D + L +I+TLE L L G+++L L L VL++ G+ +T+
Sbjct: 612 LDLSFCDELFD--ITSLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNS 669
Query: 67 VLRSL-----------------------QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
V+ SL L+ L+ L+L G L +L
Sbjct: 670 VIGSLGNGKSFVKLILDNCKGLSDVTFLSSLSTLKELNLHHCDAVTSGIGTLGRLLQLRV 729
Query: 104 LNLAWTGV--TKLPNI----SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI--- 154
L+L WT + L +I S L LNLS+C + + + L K+++ +
Sbjct: 730 LDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNALEKLNIDNCCHVTSG 789
Query: 155 -NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 213
N + ++LS +++ ++ +++ K+L L+L+ +D ++ A
Sbjct: 790 WNVFGTLHQLRVAVLSNTRINDENIRH---ISECKSLNTLNLA---FCNDITDITALSNI 843
Query: 214 N-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQI---DDYAISYMSMMPSLKFI 267
LR LN+ GV L G LP L L GT + Y Y ++ SL +
Sbjct: 844 TMLRELNIDWCFNIEKGVEAL-GKLPKLRELDAKKCGTSVRWMQQYP--YNTLFKSLVKL 900
Query: 268 DISN---TDIKGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ N + G + +L+L L + +L L LNL+ +V D L
Sbjct: 901 NLENGRESFCVGTLSSTAIVEELLLGRACEPYHLPPISSLRRLRVLNLDDGRVCDIWLEG 960
Query: 318 LSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
+S K L L++ N + +TD+S LSSLS L L++ G +F+ L++
Sbjct: 961 ISQSKSLQSLNVSNCNYITDIS--ALSSLSTLEELNVNCCDRIRKGWEAFEALTRLRVAT 1018
Query: 377 LHGGWLLTED-AILQFCKMHPRIEVW--HELSVICPSDQIGS 415
L W+ E +L CK +E++ ++S I P + I S
Sbjct: 1019 LSVTWVTNEGIRLLSGCKNLRNLELYCCRDVSNIEPINNIKS 1060
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 137/331 (41%), Gaps = 67/331 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
L EL+LS C+++ +AG + L + L LS T +T I+ S + L LDL
Sbjct: 561 LNELNLSDCIRI-NAGWEALEKLQQLHVAILSNTHITDRDISHFSKCKELVTLDLSFCDE 619
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNI 117
+ D+ SL +T LE L+L +G +VL PRL LN+ +T L N
Sbjct: 620 LFDIT--SLSNITTLEDLNLDNCSKIRKGLSVLGELPRLRVLNVKGVHLTNSVIGSLGNG 677
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
S L L NC L+ TF++ + L D S
Sbjct: 678 KSFVKLILDNCK-----------------GLSDVTFLSSLSTLKELN---LHHCDAVTSG 717
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--- 234
+ L Q++ L DL + I ++S+E + + L +LNLS+ + ++ I +
Sbjct: 718 IGTLGRLLQLRVL---DLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLNA 774
Query: 235 -------------------GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
G L L + LS T+I+D I ++S SL ++++
Sbjct: 775 LEKLNIDNCCHVTSGWNVFGTLHQLRVAVLSNTRINDENIRHISECKSLNTLNLA----- 829
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
F + TD +TAL N+ L LN++
Sbjct: 830 -FCNDI---TD----ITALSNITMLRELNID 852
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 179/395 (45%), Gaps = 47/395 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L+EL+++ C ++ G + +++ L LS T +T +GI LLS +NL L+L
Sbjct: 987 LSTLEELNVNCCDRIR-KGWEAFEALTRLRVATLSVTWVTNEGIRLLSGCKNLRNLEL-- 1043
Query: 61 LPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS 119
D+ + + + LE L + N G + M PRL L L T S
Sbjct: 1044 YCCRDVSNIEPINNIKSLEELTIQNCHNINEGLLKVGMLPRLRVLVLRKLQSTYF----S 1099
Query: 120 LECLNLSNCTIDSILEGNE---------NKAPLAKISLA-GTTFINE-----REAFLYIE 164
L L S + +EG E N A L ++ +A G +N+ + +L++
Sbjct: 1100 LSSLGESKSLVKLTIEGPEELCDIKLISNIATLKELKIAHGDRLLNDVGDLGKLPWLHVL 1159
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
T LS ++ N+ C ++++L+ LD++ S D + ++ + A L LNLS
Sbjct: 1160 T--LSHFNMGNTCFESVC---KIRSLKSLDITHSFELPD-IYHISNLTA-LEELNLSGCY 1212
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+G L LP L +L+LS T++ Y Y+S SL +++ + D+
Sbjct: 1213 HIISGWEALTA-LPRLRVLNLSSTRVTTSYGGYYISRCKSLITLNLESCDM--------- 1262
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
TD + L ++ LE L++ + + L T +L L+L ++ +TD L ++
Sbjct: 1263 -TD----ASCLADIKTLEELHIGKCEELTRGFSALFTLPQLRILNLMDSLITDEDLREIQ 1317
Query: 344 SLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
+ +L++ N + + +S+K +DLH
Sbjct: 1318 LSHTIEDLNLSYCKELND-ITPVRRIKSIKKMDLH 1351
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 165/394 (41%), Gaps = 73/394 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L L R + + +HL +I TLE+L +++T + I +S L NL LDL +
Sbjct: 183 LKRLCL-RSNNIDNNDARHLFNIGTLEELAITDT-MQLTNIRGISRLTNLKCLDLNSTNI 240
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
D + + KL L + S+ +N A T + +++LE L
Sbjct: 241 DDSCIGEISACAKLSKLSV--SECNNIIDA------------------TPISQLAALEEL 280
Query: 124 NL-SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
NL SNC I T I L + LS + V ++ L C
Sbjct: 281 NLNSNCHI--------------------TKGIGTLGMLLRLRMLDLSGVSVEDNFLKDLC 320
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
LE L+LS I ++ ++ A + LNL+ R + G+G++ LP L +
Sbjct: 321 ---DCGPLERLNLSYC-IQLTNINPLSNATA-IEELNLNGCRRITRGIGVVWA-LPKLRV 374
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF----------------IQQVGAETD 286
L + G + + ++ + SL + +S + GF IQ+ D
Sbjct: 375 LHMKGVHLSEPSLDSVGTGGSL--VKVSLDNCAGFGDMTLLSSIVTLEELNIQKCA---D 429
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSL 345
++ + L L +L LN+++ +S + K L+ L+L S+T +S + L+++
Sbjct: 430 IISGVCCLGTLPYLRVLNIKEAHISSLDFTGIGASKSLLQLTLE--SITGLSNVEALANI 487
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
L LS+ ++G+G LK+LDL G
Sbjct: 488 LTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSG 521
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 150/388 (38%), Gaps = 96/388 (24%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+ ++ L +I TLEKL L GI L +L L VLDL G LR L V +
Sbjct: 479 SNVEALANILTLEKLSLLGCNGIDAGIGCLGNLPQLKVLDLSGTNTDSDSLRGLCVSQTI 538
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC---LNLSNCTIDSIL 134
L+ L+ W VT + +IS+LE LNLS+C I
Sbjct: 539 VSLN----------------------LSHCWK-VTSVFHISALETLNELNLSDCI--RIN 573
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
G E L ++ +A +LS +++ +S F ++ K L LD
Sbjct: 574 AGWEALEKLQQLHVA-----------------ILSNTHITDRDISHF---SKCKELVTLD 613
Query: 195 LSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
LS D+ ++ + L +LNL N G+ +L G LP L +L++ G + +
Sbjct: 614 LS---FCDELFDITSLSNITTLEDLNLDNCSKIRKGLSVL-GELPRLRVLNVKGVHLTNS 669
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
I + S F+ + + KG +T L +L+ L+ LNL DA
Sbjct: 670 VIGSLGNGKS--FVKLILDNCKGLSD-----------VTFLSSLSTLKELNLHHC---DA 713
Query: 314 TLFPLSTFKELIHL--------SLRNASLTDV-------------------SLHQLSSLS 346
+ T L+ L + N SL D+ S+ ++SL+
Sbjct: 714 VTSGIGTLGRLLQLRVLDLGWTKIDNNSLEDICACSSPLVSLNLSHCKEITSISAIASLN 773
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
L L+I + SG F L++
Sbjct: 774 ALEKLNIDNCCHVTSGWNVFGTLHQLRV 801
>gi|104647019|gb|ABF74133.1| disease resistance protein [Arabidopsis thaliana]
gi|104647021|gb|ABF74134.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|104646943|gb|ABF74095.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPPVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEXXXTMXXLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRXXPWSIARLTRLQVLXIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|104646973|gb|ABF74110.1| disease resistance protein [Arabidopsis thaliana]
Length = 584
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
thaliana]
Length = 1294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 70/386 (18%)
Query: 4 LKELDLSRC---VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV----- 55
LK++DLSRC V+V D L + LE+L LS + + +L+ LS
Sbjct: 627 LKKMDLSRCKYLVEVPD-----LSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTN 681
Query: 56 -LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTG 110
+ L +P+ ++L+SL+ V G + LK FP +S+ L L+ T
Sbjct: 682 CIQLKDIPIG-IILKSLET-------------VGMSGCSSLKHFPEISWNTRRLYLSSTK 727
Query: 111 VTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLY 162
+ +LP+ IS L CL ++S+C T+ S L + L ++L G + L
Sbjct: 728 IEELPSSISRLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQ 784
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS- 221
TSL + L+VS L+ F ++E L +S + I + + C + LR+L++S
Sbjct: 785 NLTSLET-LEVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISE 840
Query: 222 NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQ 280
N R +S V I L +LE L LSG + + + + M L++ D+ T IK +
Sbjct: 841 NKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPEN 898
Query: 281 VG----------AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELI 325
+G + T + + ++ L L+ L + + + L PLS F +L
Sbjct: 899 IGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLR 958
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNL 351
LSL N ++T++ +S+ L NL
Sbjct: 959 ALSLSNMNMTEIP----NSIGNLWNL 980
>gi|423414880|ref|ZP_17392000.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|423429338|ref|ZP_17406342.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
gi|401097800|gb|EJQ05822.1| hypothetical protein IE1_04184 [Bacillus cereus BAG3O-2]
gi|401121644|gb|EJQ29433.1| hypothetical protein IE7_01154 [Bacillus cereus BAG4O-1]
Length = 760
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|430746592|ref|YP_007205721.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
gi|430018312|gb|AGA30026.1| WD40 repeat-containing protein [Singulisphaera acidiphila DSM
18658]
Length = 830
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
S I D +E +A + NL L++ T R G+ LA LP L L+LS + + D A
Sbjct: 629 SEEGIDDAGLEHLARL-VNLEGLSIHQTARIRGPGLAHLA-KLPKLTKLNLS-SGLSDKA 685
Query: 255 ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDAT 314
++ ++ + LK + + +TD++ + AL+ + L L+L++T+V+DA
Sbjct: 686 VARLAPLKELKRLSLDHTDLRDS------------GMAALKGMTTLTELSLDETKVTDAG 733
Query: 315 LFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI------RDAVLTNSGL 363
L L ++ LSL N S+ L L +S+L +LS + + LT++GL
Sbjct: 734 LSALKGMVQMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGL 788
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
++D + L + L++L L T L G+A L + L+ L L VTD L +L+ +
Sbjct: 681 LSDKAVARLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGM 740
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPR---LSFLNLAW--------TGVTKLPNISSLECL 123
++E L L V G A LK R LSF+ +A G+ L N+ +L+ L
Sbjct: 741 VQMERLSLGNVSVRGPGLANLKGMSRLKSLSFVAVAQYKPSPLTDAGLVHLENLPALDFL 800
Query: 124 NLSNCTI 130
NL ++
Sbjct: 801 NLGETSV 807
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 236 HLPNLEILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
L NLE LS+ T +I +++++ +P L +++S+ G + ++ L
Sbjct: 643 RLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSS----GLSDK---------AVARL 689
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L L+RL+L+ T + D+ + L L LSL +TD L L + ++ LS+
Sbjct: 690 APLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGMVQMERLSLG 749
Query: 355 DAVLTNSGLGSFK 367
+ + GL + K
Sbjct: 750 NVSVRGPGLANLK 762
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 5 KELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL-GGLP 62
K+L + + DAG++HL + LE L + +T + G+A L+ L L+ L+L GL
Sbjct: 623 KDLRIDSEEGIDDAGLEHLARLVNLEGLSIHQTARIRGPGLAHLAKLPKLTKLNLSSGL- 681
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNI 117
+D + L L +L+ L L + + + G A LK L+ L+L T G++ L +
Sbjct: 682 -SDKAVARLAPLKELKRLSLDHTDLRDSGMAALKGMTTLTELSLDETKVTDAGLSALKGM 740
Query: 118 SSLECLNLSNCTI 130
+E L+L N ++
Sbjct: 741 VQMERLSLGNVSV 753
>gi|359464005|ref|ZP_09252568.1| internalin A protein [Acaryochloris sp. CCMEE 5410]
Length = 624
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 186/388 (47%), Gaps = 61/388 (15%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG- 59
+T L L+L R + D + LL+ L +L +S A G+A L L+ L+ LDL
Sbjct: 183 LTTLNSLNL-RSNAIDDYSV--LLNFKELSQLTVSVR--EATGLAFLQDLRGLTYLDLSY 237
Query: 60 GLPVTDL-VLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP--- 115
++D+ VLR L KL +LDL +Q+S+ AVL P+L+ L+L+ ++ L
Sbjct: 238 NHWISDISVLRHL---PKLTHLDLGSNQISD--IAVLSDLPQLTHLSLSANKISDLSVLQ 292
Query: 116 NISSLECLNLSNCTIDSI-----LEG--------NE--NKAPLAKISLAGTTFINEREAF 160
+ LE L++S I I L+G N+ + + L ++ ++ E
Sbjct: 293 TLQGLESLDISANEIADIAILQNLQGLTQLDISSNDVSDISALQDLTTLTQLNVSSNEVI 352
Query: 161 LY-IETSL--LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
Y + L L+ LDVS++ LS L + AL L+LS + + D SV L
Sbjct: 353 DYSVLQGLTELTNLDVSDNQLSEISDLQGLHALTSLNLSYNQLSDISVLQDL---KQLAT 409
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT----- 272
LNLS S V + +L L+LS TQI D +S + + L +D+ +
Sbjct: 410 LNLSYNPVSDIAV---LQNFKDLTTLNLSFTQITD--LSTLQGLKGLTSLDLHSNQIRDI 464
Query: 273 ----DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
D+KG + ++ + + ++AL+NL L LNL Q+SD ++ ++L L+
Sbjct: 465 SALQDLKG-LYRLNVSDNQLSDISALRNLKGLFSLNLSINQISD-----IAALQDLTRLT 518
Query: 329 LRNAS---LTDVSLHQLSSLSKLTNLSI 353
NAS L+D+S+ L L++L +L +
Sbjct: 519 SLNASHNRLSDISV--LQGLTRLNSLDL 544
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 74/338 (21%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
+L + L ++L T ++ + LS L+NL+ LDL + D+ +Q L +L L
Sbjct: 113 YLQQATNLTTVYLKTTHIS--DYSFLSDLKNLTHLDLSNNQIADISF--IQDLKQLTSLG 168
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID--SILEGNEN 139
L +++ ++ L ++++L LNL + ID S+L N
Sbjct: 169 LAANKI---------------------VDISGLKDLTTLNSLNLRSNAIDDYSVL---LN 204
Query: 140 KAPLAKISLA-----GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
L++++++ G F+ + Y++ S N +S L + L HLD
Sbjct: 205 FKELSQLTVSVREATGLAFLQDLRGLTYLDLSY-------NHWISDISVLRHLPKLTHLD 257
Query: 195 LSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD 252
L S+ I D +A + L +L+LS + S V L LE L +S +I D
Sbjct: 258 LGSNQISD-----IAVLSDLPQLTHLSLSANKISDLSV---LQTLQGLESLDISANEIAD 309
Query: 253 YAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
AI + + L +DIS+ D+ ++ALQ+L L +LN+ +V D
Sbjct: 310 IAI--LQNLQGLTQLDISSNDVS--------------DISALQDLTTLTQLNVSSNEVID 353
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVS----LHQLSSLS 346
++ L EL +L + + L+++S LH L+SL+
Sbjct: 354 YSV--LQGLTELTNLDVSDNQLSEISDLQGLHALTSLN 389
>gi|423434920|ref|ZP_17411901.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
gi|401125158|gb|EJQ32918.1| hypothetical protein IE9_01101 [Bacillus cereus BAG4X12-1]
Length = 760
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|196229524|ref|ZP_03128389.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
gi|196226756|gb|EDY21261.1| hypothetical protein CfE428DRAFT_1554 [Chthoniobacter flavus
Ellin428]
Length = 472
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 162/358 (45%), Gaps = 33/358 (9%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L EL LS +V+DA ++ L + L L L+ L+ LL +L L L L
Sbjct: 121 LTDLPELSLSG-EQVSDAVLEKLRTFRLLGNLTLANLKLSPASHNLLLALPELHELHLIA 179
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
D L+++ KL+ L L +++ G A+L P L L L+ P + L
Sbjct: 180 TDTNDQTLKTIVQCRKLKSLHLDTLPITDDGLAILTKLPLLEELELSNLEKLGSPGFAHL 239
Query: 121 -ECLNLSNCTID--SILEGN-ENKAP---LAKISLAGTTFINEREAFLYIETSLLSFLDV 173
+C L + + SIL G EN A L +SL GT + A L T L S LD
Sbjct: 240 VDCHGLKSLYVSGFSILSGMVENIARCKNLETLSLLGTELKDAGIAPLSALTKLHS-LDC 298
Query: 174 SNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSV-EMVACVGANLRNLN--LSNTRFSSA 228
S S +S F L L+L + DD++ + + L LN L+++ F+ A
Sbjct: 299 SGSGVSGTAFAAWPVRSQLTSLNLDRTPGVDDAICKNIEHAFPKLEYLNVKLADSGFTPA 358
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVGAETD 286
G GILA L +L L+L G I+D ++ ++ +L + I + KG +
Sbjct: 359 GAGILA-RLHSLHTLNLGGAGINDEVVAQLARNDALNMLAIPMAQLSEKGVV-------- 409
Query: 287 LVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN--ASLTDVSLHQL 342
AL + HL L+L V+DA + + KEL L++ AS T++ LH++
Sbjct: 410 ------ALAKIPHLNELSLNVPPVTDAAVKAFARCKELKTLNIGKDAASDTELKLHKV 461
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 154/408 (37%), Gaps = 58/408 (14%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
AG K L + E L AD A+L L +L L L G V+D VL L+ L
Sbjct: 89 AGQKVALVRVEFPAQYPDEKPLAADDYAILDFLTDLPELSLSGEQVSDAVLEKLRTFRLL 148
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN 137
L L ++S +L P L L+L T + ++C L + +D++
Sbjct: 149 GNLTLANLKLSPASHNLLLALPELHELHLIATDTNDQTLKTIVQCRKLKSLHLDTL---- 204
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
P+ LA I + L S F L L+ L +S
Sbjct: 205 ----PITDDGLA----ILTKLPLLEELELSNLEKLGSPG----FAHLVDCHGLKSLYVSG 252
Query: 198 SMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
I VE +A C NL L+L T AG+ L+ L L L SG+ + A +
Sbjct: 253 FSILSGMVENIARC--KNLETLSLLGTELKDAGIAPLSA-LTKLHSLDCSGSGVSGTAFA 309
Query: 257 YMSM--------------------------MPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
+ P L+++++ D GF GA
Sbjct: 310 AWPVRSQLTSLNLDRTPGVDDAICKNIEHAFPKLEYLNVKLAD-SGFT-PAGAGI----- 362
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L+ L LNL ++D + L+ L L++ A L++ + L+ + L
Sbjct: 363 ---LARLHSLHTLNLGGAGINDEVVAQLARNDALNMLAIPMAQLSEKGVVALAKIPHLNE 419
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 398
LS+ +T++ + +F + LK L++ G D L+ K+ P++
Sbjct: 420 LSLNVPPVTDAAVKAFARCKELKTLNI--GKDAASDTELKLHKVLPQL 465
>gi|170758807|ref|YP_001788425.1| internalin [Clostridium botulinum A3 str. Loch Maree]
gi|169405796|gb|ACA54207.1| leucine-rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 364
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ L+SL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISTLNSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 SNCTI---DSILEGNENKAPLAKISLAGTTF-----INEREAF--LYI------------ 163
N + + IL + L ++LAG F IN+ ++ LYI
Sbjct: 199 HNNGVIDFEPILRMQQ----LTTVNLAGNNFTDMKNINQLKSLMELYIGDNGIKDLTFLK 254
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
S L LDVSN+ ++ ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|148379742|ref|YP_001254283.1| hypothetical protein CBO1782 [Clostridium botulinum A str. ATCC
3502]
gi|153933744|ref|YP_001384039.1| hypothetical protein CLB_1717 [Clostridium botulinum A str. ATCC
19397]
gi|153934807|ref|YP_001387581.1| hypothetical protein CLC_1725 [Clostridium botulinum A str. Hall]
gi|148289226|emb|CAL83321.1| putative surface protein [Clostridium botulinum A str. ATCC 3502]
gi|152929788|gb|ABS35288.1| leucine rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152930721|gb|ABS36220.1| leucine rich repeat protein [Clostridium botulinum A str. Hall]
Length = 1359
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 186/417 (44%), Gaps = 54/417 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKYLTNLREVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L ++++ V+K F + L ++ T ++ +PN++SL L
Sbjct: 412 SDIT--ALESSIYIRYLNLNKTEITT--LEVIKKFEHIEKLYVSGTKISTIPNLNSLMEL 467
Query: 124 NLSNC--TIDSILEGNENK---APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
+LSNC T ++ L N + L+ I + G +NE + L +L ++N+++
Sbjct: 468 DLSNCNLTSNNFLSSNFSNLVYLNLSSIKIQG-NLLNEINNISIL--GKLEYLSIANTNV 524
Query: 179 SRFCFLTQMKALEHLDLSS---------------SMIGDDSVEMVACV-GANLRNLNLSN 222
L + L LD++ +IG++ V V +R L
Sbjct: 525 VNIDVLRSLVNLRKLDITGCTKIDTQVLNHLSDVEIIGNEIVTFGDKVLEREIREL---- 580
Query: 223 TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQ 280
++ I L ++ L LSG I D + + M +L ++D+SN +I I++
Sbjct: 581 --INNYSEPIYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNIDSIKK 636
Query: 281 VGAETDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+ LVL S+ +++L LE L+L + D T L +L L L +
Sbjct: 637 LINLKKLVLHKNKIGSIKVIESLTKLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI 694
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF 391
VS+ L L L LS+ + +++ G K SLK L L + D L +
Sbjct: 695 --VSISSLGGLINLQYLSLYENKISD-GEEYLKKLYSLKELYLKNSGISNFDVTLAY 748
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 59/366 (16%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKL 77
+K + S++ LE+L LS L D I L L L+ LDL + + + SL L L
Sbjct: 651 GSIKVIESLTKLEELDLS-NNLIGD-ITALGGLSQLTRLDLSRNGI--VSISSLGGLINL 706
Query: 78 EYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK----LPNISSLECLNLSNCTIDSI 133
+YL L+ +++S+ G LK L L L +G++ L ++LE + + + D I
Sbjct: 707 QYLSLYENKISD-GEEYLKKLYSLKELYLKNSGISNFDVTLAYYNNLEKKDFTTNS-DFI 764
Query: 134 LEGNENKAPLAKI--SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
+ + + LAKI + G +E E ++ +D+S ++S+ +++
Sbjct: 765 VFDEKLDSDLAKIIREILGK---DENTNIYKSEVDTITDIDLSEDAISKLNISSKL---- 817
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG-----HLPNLEILSLS 246
++++I D ++ + NL ++NL G G L G L L L L
Sbjct: 818 ---TNTNIINLDGIQYFS----NLHSINL-------RGHGKLEGLQNLMPLRGLIKLDLQ 863
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLE 306
G +++ ++ Y++ + SLK++ ++N ++ G L+ L+NL L L+L
Sbjct: 864 GREVNYISLYYINYLTSLKYLYLNNMNLTG-------------DLSFLENLTDLRVLDLS 910
Query: 307 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 366
+T +S+ ++ LS + L L L +TD LS L LTNL I+ ++ N+ + S
Sbjct: 911 RTGISNISI--LSKLRNLNELYLGGNKITD-----LSYLENLTNL-IKLDLVGNNDITSI 962
Query: 367 KPPRSL 372
R+L
Sbjct: 963 YALRNL 968
>gi|195029419|ref|XP_001987570.1| GH21992 [Drosophila grimshawi]
gi|193903570|gb|EDW02437.1| GH21992 [Drosophila grimshawi]
Length = 815
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGD-DSVEMVACVGA 213
+ AFL I+ L + N+ LS + L+ + +LE LDL+++ I + + VA
Sbjct: 191 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLSSLERLDLANNKIKALGTSDFVAL--N 248
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA--ISYMSMMPSLKFIDISN 271
NL L LSN + SS G L LE+L L G ++ DYA + +S+ SL+ +D++
Sbjct: 249 NLVYLELSNNQISSISQRTF-GSLRKLEVLKLGGNRLGDYAQGLKALSLCLSLRQLDLTA 307
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L L +LE LNL + + L+ F L+ LSLR+
Sbjct: 308 NNLNG-----------PLSEQTLPGLRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 356
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 357 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSASLQHLTRLTVLDLTHNFLRALTSDLI 415
>gi|168181796|ref|ZP_02616460.1| putative internalin [Clostridium botulinum Bf]
gi|226950534|ref|YP_002805625.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|237796560|ref|YP_002864112.1| putative internalin [Clostridium botulinum Ba4 str. 657]
gi|182674967|gb|EDT86928.1| putative internalin [Clostridium botulinum Bf]
gi|226841706|gb|ACO84372.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|229263727|gb|ACQ54760.1| leucine-rich repeat protein [Clostridium botulinum Ba4 str. 657]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ LSSL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 SNCTI---DSILEGNENKAPLAKISLAGTTF-----INEREAF--LYIETS--------- 166
N + + IL+ + L ++LAG F IN+ + LYI +
Sbjct: 199 HNNGVIDFEPILKMQQ----LTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLK 254
Query: 167 ---LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L LDVSN+ ++ ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|206967881|ref|ZP_03228837.1| putative internalin [Bacillus cereus AH1134]
gi|206736801|gb|EDZ53948.1| putative internalin [Bacillus cereus AH1134]
Length = 760
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|72393081|ref|XP_847341.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176644|gb|AAX70748.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70803371|gb|AAZ13275.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1188
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 165/413 (39%), Gaps = 74/413 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
++E+D +RC VT AG+ L ++ L KL LS T +T SV LGG
Sbjct: 592 IREID-ARCSSVTSAGLSGLDKMTCLSKLNLSLTPVT-------------SVSLLGGS-- 635
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS---SL 120
T L L+L G+ V++ G L+ P L+ LNL+ T V L I+ +L
Sbjct: 636 -----------TSLMELNLSGTAVTSDGLLGLEKIPSLTTLNLSRTKVKSLQKIAESQTL 684
Query: 121 ECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINE------------REAFLY----- 162
E LNL +C +D S + G E L + + T + R +L
Sbjct: 685 ENLNLYSCRVDTSDVRGVECMPRLKSLDFSTTKVSDLSFLSSSPSLKTLRAQWLTLRNCG 744
Query: 163 -IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 221
I S ++S F F+ ++ D VE C A + L
Sbjct: 745 GITEGRYSKRNISGGDTKLFDFIGNIRGNNFPCWEDPGKEDQDVEAGVCGLAKIPTLEFV 804
Query: 222 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ +SS ++E + L T IDD I + + +LK + I+N + I +
Sbjct: 805 DLSYSSVSSVRSLFSSKSIETIVLRRTPIDDNGIKDIGQLQTLKTLVINN--LGDLISEG 862
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLH 340
G E NL +T+ L + + + + S TDV L
Sbjct: 863 GDE-------------------NLSETK---GVLVSVKDITLAFGMVILDLSFTDVYDLR 900
Query: 341 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++SL L L + + ++T G+ + SL+LLD+ +L+ D + + CK
Sbjct: 901 MITSLKCLKELYLVETLITVDGIRGVEQLPSLRLLDISQTSVLSLDFLSEGCK 953
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDLS C +++D ++ L+S S+L++L L TG+TA G+ ++ L +LD+ G P
Sbjct: 1088 LEALDLSFCARISD--VRPLVSSSSLQELRLVGTGVTAVGLHGALQMKALKLLDVTGTPA 1145
Query: 64 TD 65
D
Sbjct: 1146 AD 1147
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
++ LEKL LS +T + S+L L +LDL ++ + S LTKLE L L +
Sbjct: 245 LTRLEKLTLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNN 304
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWT---GVTKLPNISSLECLNLSNCTIDSILEGN-ENKA 141
+S F +L L+L++ + L +++ LE LNLSN I + G N
Sbjct: 305 NISEVQNGAFANFSKLQSLDLSYNFIMDIESLSHLTELETLNLSNNNISEVKNGAFTNLW 364
Query: 142 PLAKISLAGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMI 200
L + L+G N E AF + + FLD +N +K L L L +MI
Sbjct: 365 KLQALFLSGNKIDNIETGAFNNLTSLRALFLDYNNIHKIDLDMFKGLKKLNRLFLDHNMI 424
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 38/322 (11%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
+K L ++ LE L LS + I L+ L L LDL +++L + L+KL+
Sbjct: 145 IKSLAHLTKLETLDLSYNEIM--DIESLAHLTELETLDLSNNNISELKHGAFANLSKLQS 202
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKL-----PNISSLECLNLSNCTIDSIL 134
L L+ +++ N V L L+L + L ++ LE L LSN I +
Sbjct: 203 LFLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDSEIFKGLTRLEKLTLSNNNITEVK 262
Query: 135 EGNENKAPLAKISLAGTTFIN--EREAFLY---IETSLLSFLDVSNSSLSRFCFLTQMKA 189
+ P +I I+ ERE+F Y +ET +LS ++S F +++++
Sbjct: 263 NRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQNGAFANFSKLQS 322
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
LDLS + I D +E ++ + L LNLSN S G +L L+ L LSG +
Sbjct: 323 ---LDLSYNFIMD--IESLSHL-TELETLNLSNNNISEVKNGAFT-NLWKLQALFLSGNK 375
Query: 250 IDDYAISYMSMMPSLK--FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
ID+ + + SL+ F+D +N I ++ L + L L RL L+
Sbjct: 376 IDNIETGAFNNLTSLRALFLDYNN------IHKI--------DLDMFKGLKKLNRLFLDH 421
Query: 308 TQVSDATLFPLSTFKELIHLSL 329
+ + P TF L LS+
Sbjct: 422 NMIRN---IPPGTFDSLASLSV 440
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + LE LDLS + I D +E +A + L L+LSN S G A +L L+ L
Sbjct: 148 LAHLTKLETLDLSYNEIMD--IESLAHL-TELETLDLSNNNISELKHGAFA-NLSKLQSL 203
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L +I++ + + SL+ + + + I ++ + L LE+L
Sbjct: 204 FLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDSEI------------FKGLTRLEKL 251
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
L +++ S +L L L+N ++ + + L+KL L + + ++
Sbjct: 252 TLSNNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQN 311
Query: 364 GSFKPPRSLKLLDLHGGWLL 383
G+F L+ LDL +++
Sbjct: 312 GAFANFSKLQSLDLSYNFIM 331
>gi|156549435|ref|XP_001603185.1| PREDICTED: chaoptin-like [Nasonia vitripennis]
Length = 1358
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 167/406 (41%), Gaps = 59/406 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK L++S + +T+ HL + L+ L LS + G + SSL +L LDL +
Sbjct: 302 LKFLNISNNL-ITELERSHLTDLRDLQVLDLSRNSIARLGANVFSSLASLVQLDLSFNAL 360
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ S + LT L++L L + + +A L P L L+L + + L S E
Sbjct: 361 RTIEESSFEGLTNLKWLSLQDNNILLVPSAALSRLPSLIHLHLEFNRIADL----SSEIF 416
Query: 124 NLSNCTIDSILEGNENKAPLAKISLAGT-TFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
S + ISL+ T + E A L+ F
Sbjct: 417 RASVPRL---------------ISLSLTRNLVRELPARLF------------------FH 443
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F L +DLS +MI S + V L L+LS R +S G L NL
Sbjct: 444 F----DKLMSIDLSGNMIPTVSQQTFLGVEDTLIFLDLSYNRLTSVG----ELQLRNLVS 495
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL--SLTALQNLNHL 300
L+L+G Q+ + + L++++IS+ + G V T L L S T LQ L +
Sbjct: 496 LNLAGNQLRKVSPETFKHLQRLQYLNISDNPLYGGFPPVFPRTLLSLDVSRTGLQVLPAI 555
Query: 301 ERLNLEQTQVSDAT-----LFPLSTFKELIHLS---LRNASLTDVSLHQLSSLSKLTNLS 352
LNLE + T L TFK ++LS L N ++T++ + L+ L +L+
Sbjct: 556 LLLNLEYLETVSLTGNKLQLLSEGTFKNHLNLSSIDLSNNAITELGNGTFAGLANLYSLN 615
Query: 353 IRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 398
+ L G F L+LLDL L ED +HPR+
Sbjct: 616 LSANKLRVFGGEHFDTGTGLQLLDLSNNLL--EDLTTTAFLIHPRL 659
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 167/396 (42%), Gaps = 45/396 (11%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+++ K+ L++S+++ LS +T G + L NL L+L +
Sbjct: 576 LSEGTFKNHLNLSSID---LSNNAITELGNGTFAGLANLYSLNLSANKLRVFGGEHFDTG 632
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-----ISSLECLNLSNCT 129
T L+ LDL + + + + PRL +NLA +T N + LE L+LS+
Sbjct: 633 TGLQLLDLSNNLLEDLTTTAFLIHPRLRSVNLAGNRLTSFTNDLIKTLQFLERLDLSSNR 692
Query: 130 IDSILEGNENK-APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQ 186
+ + E ++ + L ++SLA + I E + ++ L LD+S + L L
Sbjct: 693 LTVVKEFTFSQVSRLRELSLA-SNLIESVEELAFHNSTQLQRLDLSRNRLESLNERMLEG 751
Query: 187 MKALEHLDLSSSMIGD--DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+ LE DL+ + + +S+ + A +L ++NLS RF+ + L +L L
Sbjct: 752 ISRLEKFDLTDNRLSSLPESI-LDASRVRSLESINLSGNRFAEIPIRALERQTAHLTDLR 810
Query: 245 LSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVGAETDLVLSLTALQNLNH 299
+S ++ + I ++ +K +DIS + G + +
Sbjct: 811 ISRNRLSE--IFTQDVINKVKLLDISENSLSEKAVAGLLNEAKV---------------- 852
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L LN+ +S T + HL+L N L + H L + L L + + L
Sbjct: 853 LRTLNVANCGISRVTKLEAPFLR---HLNLSNNQLESIEQHALERTTMLEELIVSNNRLK 909
Query: 360 --NSGLGSFKPPRSLKLLDLHGG--WLLTEDAILQF 391
NS +F +LK +D+ G +++E +++ F
Sbjct: 910 SFNSISSAFASLATLKQIDVSGNDIGIISEQSLVGF 945
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 48/302 (15%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
LE+L LS LT S + L L L + + + T+L+ LDL +++
Sbjct: 683 LERLDLSSNRLTVVKEFTFSQVSRLRELSLASNLIESVEELAFHNSTQLQRLDLSRNRLE 742
Query: 89 NRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISL 148
+ +L+ RL +L ++ LP +SIL+ + ++ L I+L
Sbjct: 743 SLNERMLEGISRLEKFDLTDNRLSSLP---------------ESILDASRVRS-LESINL 786
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 208
+G F L +T+ L+ L +S + LS + ++ LD+S + + + +V +
Sbjct: 787 SGNRFAEIPIRALERQTAHLTDLRISRNRLSEIFTQDVINKVKLLDISENSLSEKAVAGL 846
Query: 209 ACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ---IDDYAISYMSM----- 260
LR LN++N S + P L L+LS Q I+ +A+ +M
Sbjct: 847 LNEAKVLRTLNVANCGISR----VTKLEAPFLRHLNLSNNQLESIEQHALERTTMLEELI 902
Query: 261 ------------------MPSLKFIDISNTDIKGFIQQ--VGAETDLVLSLTALQNLNHL 300
+ +LK ID+S DI +Q VG E VL + +L N +
Sbjct: 903 VSNNRLKSFNSISSAFASLATLKQIDVSGNDIGIISEQSLVGFENLKVLKMFSLLNCTRI 962
Query: 301 ER 302
E+
Sbjct: 963 EK 964
>gi|229108157|ref|ZP_04237780.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
gi|228675287|gb|EEL30508.1| hypothetical protein bcere0018_4470 [Bacillus cereus Rock1-15]
Length = 902
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
AG L G L NL+ +S + + + +++ M L ++G
Sbjct: 346 AG---LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSK 386
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
+ ++ LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 387 NELVDLTPLSKLSGLQKLNLEENYISDIT--PLSQLTGLYDLKLGSNEIRDV 436
>gi|290984863|ref|XP_002675146.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284088740|gb|EFC42402.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 458
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 149/359 (41%), Gaps = 44/359 (12%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+ + SL NL++ + + + + L +L L++ +++ N G L+
Sbjct: 121 LEFMGSLNNLTIRS----KIRNEGAKCIPQLKQLTNLNVEDNKIGNEGVKCFSELKHLTN 176
Query: 104 LNLAWT-----GVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINER 157
N+ G + +S L C+N+ N I + E L +++ G I ++
Sbjct: 177 FNIRNNKIMDEGAKYISQMSQLTCMNIGNNNIGEPGAEYISQMKQLTNLNIHGNR-IGDK 235
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVA------ 209
A E L+ LD+ ++L +L+QMK L +L + + + ++ + V+
Sbjct: 236 GARHISEMEGLTHLDIGYNNLGNLGSQYLSQMKKLTYLFIEGNRLDENGAKFVSELKQLT 295
Query: 210 --CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
C+GAN + + R+ + + L LS+ G +I + ++ M L +
Sbjct: 296 ILCIGAN--GIGPNGARYIT--------EMKQLTDLSIGGAKIGEEGARHLKTMNQLTNL 345
Query: 268 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL 327
+I + +GA+ + + L L++ + D +S K L L
Sbjct: 346 NIGYNRLG----SIGAK--------FISEMKQLTSLDIFYNNIEDEGAKHISELKNLRKL 393
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
+ ++TD +S L++LT+LSI L++ G L LD+ GG +++D
Sbjct: 394 DIGRNNITDEGAKYVSQLNQLTHLSITYNNLSDEGAKYINTMTQLTKLDI-GGNAISDD 451
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 110/270 (40%), Gaps = 47/270 (17%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D G +H +S ++ L+ LD+G + +L + L
Sbjct: 231 RIGDKGARH------------------------ISEMEGLTHLDIGYNNLGNLGSQYLSQ 266
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
+ KL YL + G+++ GA + +L+ L + G+ PN + I
Sbjct: 267 MKKLTYLFIEGNRLDENGAKFVSELKQLTILCIGANGIG--PNGARY------------I 312
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALE 191
E L +S+ G I E A + L+ L++ + L F+++MK L
Sbjct: 313 TE----MKQLTDLSIGGAK-IGEEGARHLKTMNQLTNLNIGYNRLGSIGAKFISEMKQLT 367
Query: 192 HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
LD+ + I D+ + ++ + NLR L++ + G ++ L L LS++ +
Sbjct: 368 SLDIFYNNIEDEGAKHISEL-KNLRKLDIGRNNITDEGAKYVS-QLNQLTHLSITYNNLS 425
Query: 252 DYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
D Y++ M L +DI I I+ +
Sbjct: 426 DEGAKYINTMTQLTKLDIGGNAISDDIEMI 455
>gi|261330569|emb|CBH13553.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 1188
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 165/413 (39%), Gaps = 74/413 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
++E+D +RC VT AG+ L ++ L KL LS T +T SV LGG
Sbjct: 592 IREID-ARCSSVTSAGLSGLDKMTCLSKLNLSLTPVT-------------SVSLLGGS-- 635
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS---SL 120
T L L+L G+ V++ G L+ P L+ LNL+ T V L I+ +L
Sbjct: 636 -----------TSLMELNLSGTAVTSDGLLGLEKIPSLTTLNLSRTKVKSLQKIAESQTL 684
Query: 121 ECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINE------------REAFLY----- 162
E LNL +C +D S + G E L + + T + R +L
Sbjct: 685 ENLNLYSCRVDTSDVRGVECMPRLKSLDFSTTKVSDLSFLSSSPSLKTLRAQWLTLRNCG 744
Query: 163 -IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 221
I S ++S F F+ ++ D VE C A + L
Sbjct: 745 GITEGRYSKRNISGGDTKLFDFIGNIRGNNFPCWEDPGKEDQDVEAGVCGLAKIPTLEFV 804
Query: 222 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ +SS ++E + L T IDD I + + +LK + I+N + I +
Sbjct: 805 DLSYSSVSSVRSLFSSKSIETIVLRRTPIDDNGIKDIGQLQTLKTLVINN--LGDLISEG 862
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-SLH 340
G E NL +T+ L + + + + S TDV L
Sbjct: 863 GDE-------------------NLSETK---GVLVSVKDITLAFGMVILDLSFTDVYDLR 900
Query: 341 QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++SL L L + + ++T G+ + SL+LLD+ +L+ D + + CK
Sbjct: 901 MITSLKCLKELYLVETLITVDGVRGVEQLPSLRLLDISQTSVLSLDFLSEGCK 953
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ LDLS C +++D ++ L+S S+L++L L TG+TA G+ ++ L +LD+ G P
Sbjct: 1088 LEALDLSFCPRISD--VRPLVSSSSLQELRLVGTGVTAVGLHGALQMKALKLLDVTGTPA 1145
Query: 64 TD 65
D
Sbjct: 1146 AD 1147
>gi|242072029|ref|XP_002451291.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
gi|241937134|gb|EES10279.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
Length = 816
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 163/405 (40%), Gaps = 72/405 (17%)
Query: 3 CLKELDLSRCVKVTD--AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
CL+ L LS C +++ A L + L+ S D + L++LQ L +L G
Sbjct: 141 CLEFLGLSGCSGISELPASFGDLKCMMYLDMSGCSAIKELPDSVGHLTNLQRL---ELSG 197
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP----- 115
+ SL LT+L+YL L R + L +LNL+ GVT+LP
Sbjct: 198 CNSLKAIPESLCGLTQLQYLSLEFCTYIVRLPEAIGCLVDLQYLNLSHCGVTELPLHLEL 257
Query: 116 --------------NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFL 161
++ LE L++S + ++ G K L + T+ L
Sbjct: 258 ALCSIKKELPRALRGLTRLEYLDMS---WNGLVVGKMEKDDLLDAMKSLTSL-----KVL 309
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 221
Y+ L DV + + F+ + LEHLDLSS + +E + NL+ L+
Sbjct: 310 YLSGCLKRCFDVKKND-AYLDFIGTLTNLEHLDLSS----NGELEYLPESIGNLKRLHTL 364
Query: 222 NTRFSSA--GVGILAGHLPNLEILSLSGT--QIDDYAISYMSMMPSLKFIDISNTDIKGF 277
N R S + + L+ L L G ++ D A S + +L + DI G+
Sbjct: 365 NLRNCSGLMSLPVSISGATGLKSLVLDGCSHEVMDQATSLLHYSLTLPLFKVRADDISGY 424
Query: 278 --IQQVGAETDL-VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+ Q+ E+D+ L++ +L+N+ LE +A LS + L+ L+L
Sbjct: 425 SNLHQLQGESDIGGLNIVSLENVRFLE----------EAQRLKLSAKQNLVKLTL----- 469
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
S +K + I D L LG PP SLK L G
Sbjct: 470 ---------SWTKDAHRLIEDKDL----LGELVPPMSLKSFRLEG 501
>gi|229177836|ref|ZP_04305209.1| Internalin [Bacillus cereus 172560W]
gi|228605627|gb|EEK63075.1| Internalin [Bacillus cereus 172560W]
Length = 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|116109776|gb|ABJ74267.1| CG11136-like protein [Drosophila miranda]
gi|116109778|gb|ABJ74268.1| CG11136-like protein [Drosophila miranda]
gi|116109780|gb|ABJ74269.1| CG11136-like protein [Drosophila miranda]
gi|116109782|gb|ABJ74270.1| CG11136-like protein [Drosophila miranda]
gi|116109784|gb|ABJ74271.1| CG11136-like protein [Drosophila miranda]
gi|116109786|gb|ABJ74272.1| CG11136-like protein [Drosophila miranda]
gi|116109788|gb|ABJ74273.1| CG11136-like protein [Drosophila miranda]
gi|116109790|gb|ABJ74274.1| CG11136-like protein [Drosophila miranda]
gi|116109792|gb|ABJ74275.1| CG11136-like protein [Drosophila miranda]
gi|116109794|gb|ABJ74276.1| CG11136-like protein [Drosophila miranda]
gi|116109796|gb|ABJ74277.1| CG11136-like protein [Drosophila miranda]
gi|116109798|gb|ABJ74278.1| CG11136-like protein [Drosophila miranda]
gi|116109800|gb|ABJ74279.1| CG11136-like protein [Drosophila miranda]
gi|116109802|gb|ABJ74280.1| CG11136-like protein [Drosophila miranda]
gi|116109804|gb|ABJ74281.1| CG11136-like protein [Drosophila miranda]
gi|116109806|gb|ABJ74282.1| CG11136-like protein [Drosophila miranda]
gi|116109808|gb|ABJ74283.1| CG11136-like protein [Drosophila miranda]
gi|116109810|gb|ABJ74284.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 139 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 196
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 197 NLVYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 255
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 256 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 304
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 305 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|449134939|ref|ZP_21770403.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
gi|448886418|gb|EMB16825.1| leucine-rich repeat domain protein [Rhodopirellula europaea 6C]
Length = 341
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
DA K + + L + +T +T DG ++L+ L L + L PVTD L ++ L K
Sbjct: 131 DAKAKSISGLPALIAVTFQDTSVTDDGASVLAELNELQDISLMNSPVTDKTLIAISTLPK 190
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTID 131
L L+L G++++ + P L L LA T G+ + NI LE +NL ID
Sbjct: 191 LTKLNLRGTKITGEAFEPISKLP-LEDLELAETDFGPEGMPAIANIEGLEKVNLWLTKID 249
Query: 132 S-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKAL 190
+ L+ E K L +++ I E + + L L + +S++ L Q+K L
Sbjct: 250 NESLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDA-LPQLKPL 308
Query: 191 EHLD 194
+ L+
Sbjct: 309 QELE 312
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
LPNL+ L + G + DD +S +P+L + +T + V AE
Sbjct: 116 LPNLKRLRIYGKEFDDAKAKSISGLPALIAVTFQDTSVTDDGASVLAE------------ 163
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
LN L+ ++L + V+D TL +ST +L L+LR +T + +S L
Sbjct: 164 LNELQDISLMNSPVTDKTLIAISTLPKLTKLNLRGTKITGEAFEPISKL 212
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++ + AL + + + DD ++A + L++++L N+ + + I LP L L
Sbjct: 137 ISGLPALIAVTFQDTSVTDDGASVLAELN-ELQDISLMNSPVTDKTL-IAISTLPKLTKL 194
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+L GT+I A +S +P L+ ++++ TD G E + A+ N+ LE++
Sbjct: 195 NLRGTKITGEAFEPISKLP-LEDLELAETDF-------GPE-----GMPAIANIEGLEKV 241
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
NL T++ + +L L L++ N ++T+ ++ + SL L L + +
Sbjct: 242 NLWLTKIDNESLKAFEGKTSLTALNIDNCPAITEEAIPVIVSLPHLKLLHLGKTSVAPDA 301
Query: 363 LGSFKPPRSLKLL 375
L KP + L+ L
Sbjct: 302 LPQLKPLQELETL 314
>gi|325111037|ref|YP_004272105.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
gi|324971305|gb|ADY62083.1| hypothetical protein Plabr_4512 [Planctomyces brasiliensis DSM
5305]
Length = 407
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 38/303 (12%)
Query: 70 SLQVLTKLE----YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSL 120
SL++L E +DL S +S+ LK F RL L LA T +T +L +I+SL
Sbjct: 89 SLELLKVFEKQTVIVDLSLSNISDDSLDSLKDFNRLEVLILAHTRITGSRLDQLSSITSL 148
Query: 121 ECLNLSNCTID--------SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
L+L+ D S+ + K P +K+S G + R FL L
Sbjct: 149 HTLDLTAIEFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRMPFLR-SLDLSGRRG 207
Query: 173 VSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
V+NS L+ L +M L L +S + I DD++ ++A + A L+ L+L T +
Sbjct: 208 VANSWLTH---LAKMPRLNVLGVSFAKNIDDDAIPLLAGLPA-LKWLSLEGTSITGMFPA 263
Query: 232 ILAGHLPNLEILSLSGTQID-DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
L G+L NL+ LSL+ + + +S + SLK ++++ D K + S
Sbjct: 264 AL-GNLTNLDTLSLAHCTFNAPQTLESLSKLRSLKQLNLN--DCKN-----------ITS 309
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
L L+ ++HLE + L+ T ++DA L L +L ++ L + ++ +S L L
Sbjct: 310 LKFLRGMSHLEAIGLKNTNLTDAILKELQYCLQLKYVDLTRCRIGKETISTISQLKLLQT 369
Query: 351 LSI 353
+S+
Sbjct: 370 ISL 372
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 41/285 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T + +L LS ++D + L + LE L L+ T +T + LSS+ +L LDL +
Sbjct: 100 TVIVDLSLS---NISDDSLDSLKDFNRLEVLILAHTRITGSRLDQLSSITSLHTLDLTAI 156
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL-KMFPRLSFLNL--------AW-TGV 111
D + SL L +L+ L + S++S G A+L P L L+L +W T +
Sbjct: 157 EFDDESVPSLASLRQLQRLKVPTSKLSEDGFALLCTRMPFLRSLDLSGRRGVANSWLTHL 216
Query: 112 TKLPNISSLECLNLSNCTIDSI-------------LEGNE----------NKAPLAKISL 148
K+P ++ L N D+I LEG N L +SL
Sbjct: 217 AKMPRLNVLGVSFAKNIDDDAIPLLAGLPALKWLSLEGTSITGMFPAALGNLTNLDTLSL 276
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDSV-E 206
A TF + + L L++++ +++ FL M LE + L ++ + D + E
Sbjct: 277 AHCTFNAPQTLESLSKLRSLKQLNLNDCKNITSLKFLRGMSHLEAIGLKNTNLTDAILKE 336
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
+ C+ L+ ++L+ R + ++ L L+ +SLSGTQID
Sbjct: 337 LQYCL--QLKYVDLTRCRIGKETISTIS-QLKLLQTISLSGTQID 378
>gi|229068980|ref|ZP_04202273.1| Internalin [Bacillus cereus F65185]
gi|229078614|ref|ZP_04211171.1| Internalin [Bacillus cereus Rock4-2]
gi|228704684|gb|EEL57113.1| Internalin [Bacillus cereus Rock4-2]
gi|228714092|gb|EEL65974.1| Internalin [Bacillus cereus F65185]
Length = 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|229166263|ref|ZP_04294022.1| Internalin [Bacillus cereus AH621]
gi|423594649|ref|ZP_17570680.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
gi|228617208|gb|EEK74274.1| Internalin [Bacillus cereus AH621]
gi|401223601|gb|EJR30169.1| hypothetical protein IIG_03517 [Bacillus cereus VD048]
Length = 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|423486542|ref|ZP_17463224.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
gi|423492266|ref|ZP_17468910.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|423500943|ref|ZP_17477560.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401154267|gb|EJQ61685.1| hypothetical protein IEY_04170 [Bacillus cereus CER074]
gi|401156550|gb|EJQ63954.1| hypothetical protein IEW_01164 [Bacillus cereus CER057]
gi|402439323|gb|EJV71330.1| hypothetical protein IEU_01165 [Bacillus cereus BtB2-4]
Length = 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|198458315|ref|XP_001360988.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
gi|198136299|gb|EAL25564.2| GA10784 [Drosophila pseudoobscura pseudoobscura]
Length = 806
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|228951810|ref|ZP_04113908.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|423423509|ref|ZP_17400540.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|423504975|ref|ZP_17481566.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449088218|ref|YP_007420659.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|228807733|gb|EEM54254.1| Internalin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|401115199|gb|EJQ23052.1| hypothetical protein IE5_01198 [Bacillus cereus BAG3X2-2]
gi|402455497|gb|EJV87280.1| hypothetical protein IG1_02540 [Bacillus cereus HD73]
gi|449021975|gb|AGE77138.1| Internalin [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 755
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|168179599|ref|ZP_02614263.1| putative internalin [Clostridium botulinum NCTC 2916]
gi|182669866|gb|EDT81842.1| putative internalin [Clostridium botulinum NCTC 2916]
Length = 364
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 43/244 (17%)
Query: 13 VKVTDAGMKHLLSISTLEKLW-LSETGLT---ADGIALLSSLQNLSVLDLGGLPVTDLVL 68
+K DA K + ++ +E L L E LT D I+ LSSL+++S+L LG +TD+
Sbjct: 83 IKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIA- 141
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK---LPNISSLECLNL 125
SL+ +KL+ L L+ ++V + LK F ++ L+L V LP + +L+ + L
Sbjct: 142 -SLKNCSKLKELYLFDNKVID--ITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYL 198
Query: 126 SNCTI---DSILEGNENKAPLAKISLAGTTF-----INEREAF--LYIETS--------- 166
N + + IL+ + L ++LAG F IN+ + LYI +
Sbjct: 199 HNNGVIDFEPILKMQQ----LTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLK 254
Query: 167 ---LLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L LDVSN+ ++ ++ + +E L++SS+ I D + N +NL+ +
Sbjct: 255 SMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRD------IKILENFKNLSKVDL 308
Query: 224 RFSS 227
R+++
Sbjct: 309 RYNN 312
>gi|104646939|gb|ABF74093.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|224124658|ref|XP_002330078.1| predicted protein [Populus trichocarpa]
gi|222871503|gb|EEF08634.1| predicted protein [Populus trichocarpa]
Length = 1228
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
++++ LE LDL+ + +D +++C + L++L+LS+ + + +G+ +L+ L LE
Sbjct: 121 SKLRKLEVLDLTRNRFNNDK-GILSCFNGLSALKSLDLSDNQLTGSGLKVLSSRLKKLEN 179
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L LS Q +D S ++ SLK +D+S ++ G G + VLS L LE
Sbjct: 180 LHLSANQCNDSIFSSITGFSSLKSLDLSYNEVTG----SGLK---VLS----SRLKRLEN 228
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
L+L Q +D+ L+ F L L+L LT S+
Sbjct: 229 LDLSDNQCNDSIFSSLTGFSSLKSLNLSYNQLTGSSM 265
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 141/349 (40%), Gaps = 48/349 (13%)
Query: 23 LLSISTLEKLWLSETGLTA----DGIALLSS-LQNLSVLDL--GGLPVTDLVLRSLQVLT 75
L L+ L LS GL +G +LSS L+ L VLDL +L L+
Sbjct: 91 FLPFKELQSLDLSYNGLVGCSENEGFEVLSSKLRKLEVLDLTRNRFNNDKGILSCFNGLS 150
Query: 76 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 135
L+ LDL +Q++ G VL + + KL N+ L+ + C DSI
Sbjct: 151 ALKSLDLSDNQLTGSGLKVLS------------SRLKKLENLH----LSANQCN-DSIFS 193
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHL 193
+ L + L+ L L LD+S++ S F LT +L+ L
Sbjct: 194 SITGFSSLKSLDLSYNEVTGSGLKVLSSRLKRLENLDLSDNQCNDSIFSSLTGFSSLKSL 253
Query: 194 DLS------SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
+LS SSM+ + + + L L + +G +L L NLE L L
Sbjct: 254 NLSYNQLTGSSMVSIEKNGYYSFLQYTKWILPLYPSDNFLSGFQVLVSGLRNLEELHLYS 313
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ 307
++++ +S +S +LK +D+S G T L+ L +LE L L
Sbjct: 314 NKLNNNILSSLSGFSTLKSLDLSYNKFTG--------------STGLKGLRNLEELYLGF 359
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLT-DVSLHQLSSLSKLTNLSIRD 355
+ +++ L LS F L L L N T + L L +L L NL D
Sbjct: 360 NKFNNSILSSLSGFSTLKSLDLSNNKFTGSIGLKGLRNLETL-NLEYTD 407
>gi|195154022|ref|XP_002017922.1| GL17042 [Drosophila persimilis]
gi|194113718|gb|EDW35761.1| GL17042 [Drosophila persimilis]
Length = 806
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 183 HKSAFLGIKGPLQALGLPGNALLSVPWNALSTLGALERLDLANNKI--KALGTADFVGLT 240
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L LE+L L G ++ DYA S S+ SL+ +D++
Sbjct: 241 NLGYLELSNNQISSISQRTFS-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLTA 299
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L + +LE LNL + + L+ F L+ LSLR+
Sbjct: 300 NNLNG-----------PLSAQTLAGMRNLESLNLNRNMIKSIQNKALANFSRLVSLSLRH 348
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 349 NQIDVLQDHAFYGLGALDSLDLSYNGIVAISSSSLQHLSRLTVLDLTHNFLRALTSDLI 407
>gi|229189511|ref|ZP_04316527.1| Internalin [Bacillus cereus ATCC 10876]
gi|228593956|gb|EEK51759.1| Internalin [Bacillus cereus ATCC 10876]
Length = 766
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|218185951|gb|EEC68378.1| hypothetical protein OsI_36520 [Oryza sativa Indica Group]
Length = 373
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 37 TGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLK 96
TG ++SL+NL LDL GL T +V L L+KLE+LDL G+ + + + L
Sbjct: 114 TGPDGRFPVFVASLRNLQYLDLSGLGFTGMVPYQLGNLSKLEFLDLSGTGMQSADISWLT 173
Query: 97 MFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCTIDSILEG--NENKAPLAK 145
L +L L+ W V I SL L+LS C++ + + N L K
Sbjct: 174 RLQWLKYLYLSSVNLSAISDWAHVVN--KIPSLTVLSLSGCSLTRVDHSLKHVNLTRLEK 231
Query: 146 ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLS 196
+ L+G F + + + L +LD+ ++ L RF +T M +L+ LD S
Sbjct: 232 LHLSGNDFSHPLSSCWFWILKTLIYLDLESTGLYGRFPNAITNMTSLQVLDFS 284
>gi|423366834|ref|ZP_17344267.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
gi|401087016|gb|EJP95231.1| hypothetical protein IC3_01936 [Bacillus cereus VD142]
Length = 760
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|149173875|ref|ZP_01852504.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
gi|148847405|gb|EDL61739.1| hypothetical protein PM8797T_05540 [Planctomyces maris DSM 8797]
Length = 525
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 42/364 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSS---LQNLSVLDLGG 60
L+ LDLS C + TDA K L +++L L L +T LT D + LS L++L+V G
Sbjct: 148 LEHLDLSGCRRFTDASGKSLAQLTSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKG 207
Query: 61 L--------PVTDLVLRSLQ-VLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
+ P+ + L L+ +L K E L L S LK P ++ +
Sbjct: 208 MWLNENTIVPLEKMPLEELEGMLIKDENLPLIAQMKS------LKSLPFEQDRSIKDDQL 261
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ L +I ++ LN+ + G + + L ++ +A +ET +S
Sbjct: 262 SYLTHIRQIKKLNI------VLTRGTSDTSQLIQL-----------QALPELETLSISLG 304
Query: 172 D-VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA-CVGANLRNLNLSNTRFSSAG 229
+ L R L K +L ++ +E ++ C NLN+ ++F
Sbjct: 305 NSTEGDPLDRSGLLALAKIPALKELGIGLVNVPILEAISHCTQVQKLNLNVDTSQFQPTD 364
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
+ L + L+ L++ + D + + + SL+ I + G+ Q +
Sbjct: 365 LAYLK-EMSRLKDLTVQIALVSDDLWATLGQVKSLEEISFN----WGWPPQKEPPPFSMT 419
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
SL LQNL L+ L+L V+D L L + L L L NA +T+ L QL LS+L
Sbjct: 420 SLKQLQNLPRLKGLDLNGFPVTDEGLGYLGQCRTLERLGLNNAPITNAGLLQLRHLSQLK 479
Query: 350 NLSI 353
LS
Sbjct: 480 KLSF 483
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 160/406 (39%), Gaps = 78/406 (19%)
Query: 39 LTADGIALLSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLK 96
T DG+ + L+ L LDL +TD +R L+ L +LE+LDL G + ++ L
Sbjct: 109 FTDDGLRYVGQLKKLRYLDLSVNYQLTDAGMRHLESLKQLEHLDLSGCRRFTDASGKSLA 168
Query: 97 MFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTF 153
L L L T +T L +S L L + NEN PL K+ L
Sbjct: 169 QLTSLRTLKLRQTSLTPDVLTALSQLPELKHLAVKYSKGMWLNENTIVPLEKMPL----- 223
Query: 154 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVG 212
E E L + +L + QMK+L+ L I DD + + +
Sbjct: 224 -EELEGMLIKDENL--------------PLIAQMKSLKSLPFEQDRSIKDDQLSYLTHI- 267
Query: 213 ANLRNLNLSNTRFSSAGVGILA-GHLPNLEILSLS------GTQIDDYAISYMSMMPSLK 265
++ LN+ TR +S ++ LP LE LS+S G +D + ++ +P+LK
Sbjct: 268 RQIKKLNIVLTRGTSDTSQLIQLQALPELETLSISLGNSTEGDPLDRSGLLALAKIPALK 327
Query: 266 FIDIS--NTDIKGFIQQVGAETDLVLS----------LTALQNLNHLERLNLEQTQVSD- 312
+ I N I I L L+ L L+ ++ L+ L ++ VSD
Sbjct: 328 ELGIGLVNVPILEAISHCTQVQKLNLNVDTSQFQPTDLAYLKEMSRLKDLTVQIALVSDD 387
Query: 313 --ATL-----------------------FPLSTFKELIHLS------LRNASLTDVSLHQ 341
ATL F +++ K+L +L L +TD L
Sbjct: 388 LWATLGQVKSLEEISFNWGWPPQKEPPPFSMTSLKQLQNLPRLKGLDLNGFPVTDEGLGY 447
Query: 342 LSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
L L L + +A +TN+GL + LK L +G + E A
Sbjct: 448 LGQCRTLERLGLNNAPITNAGLLQLRHLSQLKKLSFYGSKIDREPA 493
>gi|116109812|gb|ABJ74285.1| CG11136-like protein [Drosophila miranda]
gi|116109814|gb|ABJ74286.1| CG11136-like protein [Drosophila miranda]
gi|116109816|gb|ABJ74287.1| CG11136-like protein [Drosophila miranda]
gi|116109818|gb|ABJ74288.1| CG11136-like protein [Drosophila miranda]
gi|116109820|gb|ABJ74289.1| CG11136-like protein [Drosophila miranda]
gi|116109822|gb|ABJ74290.1| CG11136-like protein [Drosophila miranda]
gi|116109824|gb|ABJ74291.1| CG11136-like protein [Drosophila miranda]
gi|116109826|gb|ABJ74292.1| CG11136-like protein [Drosophila miranda]
gi|116109828|gb|ABJ74293.1| CG11136-like protein [Drosophila miranda]
gi|116109830|gb|ABJ74294.1| CG11136-like protein [Drosophila miranda]
gi|116109832|gb|ABJ74295.1| CG11136-like protein [Drosophila miranda]
gi|116109834|gb|ABJ74296.1| CG11136-like protein [Drosophila miranda]
gi|116109836|gb|ABJ74297.1| CG11136-like protein [Drosophila miranda]
gi|116109838|gb|ABJ74298.1| CG11136-like protein [Drosophila miranda]
gi|116109840|gb|ABJ74299.1| CG11136-like protein [Drosophila miranda]
gi|116109842|gb|ABJ74300.1| CG11136-like protein [Drosophila miranda]
gi|116109844|gb|ABJ74301.1| CG11136-like protein [Drosophila miranda]
gi|116109846|gb|ABJ74302.1| CG11136-like protein [Drosophila miranda]
Length = 473
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L+ + AL LDL+++ I ++ VG NL L LSN + SS + +L LE+
Sbjct: 168 LSTLGALNRLDLATNKI--KALGTADFVGLTNLVYLELSNNQISSISQRTFS-NLRKLEV 224
Query: 243 LSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
L L G ++ DYA S Y+S SL+ +D++ ++ G LS L + +L
Sbjct: 225 LKLGGNRLGDYAQSLRYLSQCLSLRQLDLTANNLNG-----------PLSAQTLAGMRNL 273
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
E LNL + + L+ F L+ LSLR+ + + H L L +L + +
Sbjct: 274 ESLNLNRNMIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFYGLGALDSLDLSYNGIVA 333
Query: 361 SGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
S + L +LDL +L LT D I
Sbjct: 334 ISSSSLQHLSRLTVLDLTHNFLRALTSDLI 363
>gi|229010725|ref|ZP_04167922.1| Internalin [Bacillus mycoides DSM 2048]
gi|228750399|gb|EEM00228.1| Internalin [Bacillus mycoides DSM 2048]
Length = 760
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|104646931|gb|ABF74089.1| disease resistance protein [Arabidopsis thaliana]
gi|104646933|gb|ABF74090.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCXRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|423601235|ref|ZP_17577235.1| hypothetical protein III_04037 [Bacillus cereus VD078]
gi|401230662|gb|EJR37168.1| hypothetical protein III_04037 [Bacillus cereus VD078]
Length = 760
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|365162122|ref|ZP_09358255.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363619035|gb|EHL70365.1| hypothetical protein HMPREF1014_03718 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 755
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L+ ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLSHLALRGNEF---SD 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLSHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 293
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 317
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|104646949|gb|ABF74098.1| disease resistance protein [Arabidopsis thaliana]
Length = 585
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+++ + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F +E L +S + I +++ C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG---AETD 286
I L +LE L LSG + + + M L++ D+ T IK + +G A
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEV 329
Query: 287 LVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
L S TA++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|104647005|gb|ABF74126.1| disease resistance protein [Arabidopsis thaliana]
Length = 586
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+++ + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F +E L +S + I +++ C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG---AETD 286
I L +LE L LSG + + + M L++ D+ T IK + +G A
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEV 329
Query: 287 LVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
L S TA++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|104646971|gb|ABF74109.1| disease resistance protein [Arabidopsis thaliana]
Length = 584
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+++ + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKNIPIGITLKSLETVGMS----GCSSLKHFPEISYNTRRLFLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F +E L +S + I +++ C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTNIEVLRISETSI--EAIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG---AETD 286
I L +LE L LSG + + + M L++ D+ T IK + +G A
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENIGNLVALEV 329
Query: 287 LVLSLTALQN-------LNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
L S TA++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTAIRRAPWSIARLTRLQVLAIGNSFYTSEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|423663695|ref|ZP_17638864.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
gi|401295595|gb|EJS01219.1| hypothetical protein IKM_04092 [Bacillus cereus VDM022]
Length = 760
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|224073422|ref|XP_002304093.1| predicted protein [Populus trichocarpa]
gi|222841525|gb|EEE79072.1| predicted protein [Populus trichocarpa]
Length = 969
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 187 MKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTRFSS--------AGVGILAGHL 237
K L+ LDL + ++G E + + LR L LS+ RF++ G+ +L+ L
Sbjct: 67 FKELQSLDLGYNGLVGCLENEGFQVLSSKLRELGLSDNRFNNDKSILSCFNGLKVLSSRL 126
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
LE L LSG Q +D ++ SLK +D+S Q+ A + L LQ+L
Sbjct: 127 KKLENLDLSGNQCNDTIFPALTGFSSLKSLDLSG-------NQLTASG--LRKLDFLQSL 177
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
L+ L+L+ T +S T F ST +E L L N SL L +L L LS+ +
Sbjct: 178 RSLKTLSLKDTNLSQGTFFNSSTLEE---LHLDNTSLPINFLQNTRALPALKVLSVGECD 234
Query: 358 L 358
L
Sbjct: 235 L 235
>gi|428315480|ref|YP_007113362.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239160|gb|AFZ04946.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 471
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 35/361 (9%)
Query: 52 NLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
NL++L L ++D+ L+ LT L L +W +QVSN LK LS L+L+ +
Sbjct: 137 NLTILQLDRNRISDIT--PLKFLTNLTELSIWYNQVSN--IYPLKNLTNLSVLDLSLNPL 192
Query: 112 TKLPNISSLECLNLSNCTIDSILEGNENK--APLAKISLAGTTFINEREAFLYIETSLLS 169
+ + +L LN + + N K L +SL GT I++ Y+ L+
Sbjct: 193 KDIKILENLRNLNTLGLVDNQVSNINHLKYLTSLTHLSL-GTNQISDISPLKYLNQ--LT 249
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
L +S + +S L + L L L+++ + D + NL L L+ R S
Sbjct: 250 ELGISRNQISDISPLKHLSKLTELFLNNNKVSDITPLQFL---TNLNTLWLNRNRVSDIS 306
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-------IQQVG 282
L L NL L L QI Y IS + + +LK +D++N I + +
Sbjct: 307 TLKL---LANLNTLYLINNQI--YDISPLRYLTNLKQVDLTNNKIFDLRMLDSINLTSLY 361
Query: 283 AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
+ + +++L+ + L+ L+L ++SD + PL + +L L L ++DVS L
Sbjct: 362 LTNNQIEDVSSLKFMKTLKVLSLADNKISDIS--PLKSLTKLTELYLSENQISDVS--PL 417
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWH 402
SL KLT L + + + S + KP +L L L G L + C + P +
Sbjct: 418 KSLIKLTRLDLANNRI--SDISMLKPLTNLLELYLEGNPLTNRN-----CPLVPDFRCRY 470
Query: 403 E 403
E
Sbjct: 471 E 471
>gi|423509242|ref|ZP_17485773.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
gi|402456533|gb|EJV88306.1| hypothetical protein IG3_00739 [Bacillus cereus HuA2-1]
Length = 759
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|290994068|ref|XP_002679654.1| LRR_RI domain-containing protein [Naegleria gruberi]
gi|284093272|gb|EFC46910.1| LRR_RI domain-containing protein [Naegleria gruberi]
Length = 338
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVL---RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF 103
+ L+NL+ LD+ + D ++ +S L KL +L++ +++ +G L +L
Sbjct: 86 IEKLKNLTYLDISENYIFDKLVNWGKSFGKLDKLTHLNISKNRIERKGIKYLTRMKQLRI 145
Query: 104 L-----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
L N+ + G+ + N++ L LN+S FI E+
Sbjct: 146 LDISCNNIDYCGLFLICNMNQLTNLNISR------------------------NFIKEKS 181
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
+L ++ + L+ L V + +++ FL+ L +LD+S ++IG++ ++ V + +L L
Sbjct: 182 IYL-VDLNQLTTLIVRQNDITQVSFLSNFTKLTNLDVSQNLIGNEGIKFVGEM-KHLTCL 239
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKG 276
+T F G + G L L L +S I + + ++S + L + + + D++G
Sbjct: 240 RACSTGFDEEGAKCI-GQLSQLTCLDVSHNSIKNQGVEFISQLSYLTDLTVIHCHIDLEG 298
Query: 277 --FIQQVGAETDLVLSL 291
FI ++ T L +SL
Sbjct: 299 VEFITKMNQLTRLDISL 315
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTAL 294
G L L L++S +I+ I Y++ M L+ +DIS +I L +
Sbjct: 114 GKLDKLTHLNISKNRIERKGIKYLTRMKQLRILDISCNNID------------YCGLFLI 161
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
N+N L LN+ + + + +++ L +L L +R +T VS LS+ +KLTNL +
Sbjct: 162 CNMNQLTNLNISRNFIKEKSIY-LVDLNQLTTLIVRQNDITQVSF--LSNFTKLTNLDVS 218
Query: 355 DAVLTNSGL 363
++ N G+
Sbjct: 219 QNLIGNEGI 227
>gi|402561579|ref|YP_006604303.1| internalin [Bacillus thuringiensis HD-771]
gi|401790231|gb|AFQ16270.1| internalin [Bacillus thuringiensis HD-771]
Length = 760
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ + L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMNNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +++
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVQ--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFVGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIRDAVLTN 360
LSSL L L + +T+
Sbjct: 434 --PLSSLVNLQKLDLEANYITD 453
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----NNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|46446627|ref|YP_007992.1| hypothetical protein pc0993 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400268|emb|CAF23717.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 42/205 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLS------ETG---------------- 38
+T L+ L L C KVTDAG+ HL S+ L+ L LS + G
Sbjct: 274 LTALQHLGLRGCDKVTDAGLAHLTSLRALQYLDLSFCRNITDAGLAHLTPLTALQRLLLK 333
Query: 39 ----LTADGIALLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGS-QVSNRGA 92
LT G+A L+ L+ L LDL +TD L L+ L L++LDL ++++ G
Sbjct: 334 KCENLTGAGLAHLTPLKALQYLDLSYWDNLTDDGLAHLRPLVALQHLDLANCYELTDAGL 393
Query: 93 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAK- 145
A L L+ L L W G+ L + +L+ LNLS+C N A LA
Sbjct: 394 AHLTPLVALTHLKLIWCHKLTDAGLAHLRPLVALKHLNLSSCR-------NLTDAGLAHL 446
Query: 146 ISLAGTTFINEREAFLYIETSLLSF 170
I L ++N + +T L SF
Sbjct: 447 IPLTALQYLNLSDCRKLTDTGLASF 471
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTAD-GIALLSSLQNLSVLDLGGLP 62
LK L C +TD G+ HL S++ L+ L L D G+A L+SL+ L LDL
Sbjct: 252 LKILTFETCQALTDDGLAHLASLTALQHLGLRGCDKVTDAGLAHLTSLRALQYLDLSFCR 311
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQ-VSNRGAAVLKMFPRLSFLNLAW------TGVTKL 114
+TD L L LT L+ L L + ++ G A L L +L+L++ G+ L
Sbjct: 312 NITDAGLAHLTPLTALQRLLLKKCENLTGAGLAHLTPLKALQYLDLSYWDNLTDDGLAHL 371
Query: 115 PNISSLECLNLSNC 128
+ +L+ L+L+NC
Sbjct: 372 RPLVALQHLDLANC 385
>gi|326486763|gb|ADZ76423.1| TLR3 [Epinephelus coioides]
Length = 909
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 51/387 (13%)
Query: 6 ELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL----GGL 61
EL + V++ + + L + TL + + LT D L SL+ L + + +
Sbjct: 296 ELSGNGMVRIEEGSFRWLSRLQTLILVDNNIKHLTKDTFRGLKSLEKLQLTNALASSHPI 355
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
P+ D S Q L+ LE L L + V N L L+++W+ T L NIS+
Sbjct: 356 PIIDDF--SFQPLSALESLILQRTAVRNITEHTFTGLTSLKELDMSWSSYTSLRNISNKT 413
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
++L+ +PL K++L GT A I+ S L + L +
Sbjct: 414 FISLAG-------------SPLRKLNLTGT-------AIAQIDPRSFSVLRNLTTLLLDY 453
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
F+ Q E + G D VE + + N + +NLS+ F ++P+L
Sbjct: 454 NFIKQNLTGEEFE------GLDQVEQIY-MSNNHQKINLSSDSFV---------NVPSLR 497
Query: 242 ILSLSGTQIDDYAI----SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 297
+L+L + I + AI S +P+L ++D+SN +I I+ E + L + LQ+
Sbjct: 498 VLTLGRSLIAE-AINCDPSPFRHLPNLTYLDLSNNNIAN-IRDNTFEGLVNLKVLKLQH- 554
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV 357
N+L RL + + LF +T + LI L L + L ++ L LS L NLS+ +
Sbjct: 555 NNLARL-WKSANLGGPVLFLKNTPRLLI-LDLDSNGLDEIPAEALRGLSDLHNLSLASNL 612
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLT 384
L + F +SL+ L+L + T
Sbjct: 613 LNSLQEFIFDDLKSLRFLNLQKNLITT 639
>gi|423647357|ref|ZP_17622927.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
gi|401286175|gb|EJR92008.1| hypothetical protein IKA_01144 [Bacillus cereus VD169]
Length = 760
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|290981600|ref|XP_002673518.1| predicted protein [Naegleria gruberi]
gi|284087102|gb|EFC40774.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 43/242 (17%)
Query: 16 TDAGMKHLLSISTLE--KLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
D G K + IS L L L + + G+ +S + LS L L G LR L
Sbjct: 154 VDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLFGNNFGSESLRHLVK 213
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--------TKLPNISSLECLNL 125
L+ L+YL L +++ + G L + L +L+L++ + +KL N+S LE +
Sbjct: 214 LSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQFISKLENLSQLELIR- 272
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CF 183
+I G FI++ + L+ L++ + + +
Sbjct: 273 ------------------NRIDERGVQFISKMKN--------LTKLNLGENPIRNIGALY 306
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL---PNL 240
L++MK L+ LDL + I D S+E + C+ NL+ LN+ T S V L L NL
Sbjct: 307 LSKMKQLKGLDLDGTKIDDFSIEHL-CLMKNLQYLNIERTNLSETKVETLKESLKLVKNL 365
Query: 241 EI 242
E+
Sbjct: 366 EL 367
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACV--------GANLRNLNLSN------------- 222
L+++ L HL+L+ +G +E ++ + +N+ + L N
Sbjct: 140 LSEISNLNHLNLNGVDLGGKCMEYISKLPLITLELEASNIDEIGLGNISQITTLSKLKLF 199
Query: 223 -TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----F 277
F S + L L NL+ LSL+ +IDD + Y+S++ SL+++ +S +I F
Sbjct: 200 GNNFGSESLRHLV-KLSNLKYLSLAYNKIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQF 258
Query: 278 IQQVGAETDLVL--------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
I ++ + L L + + + +L +LNL + + + LS K+L L L
Sbjct: 259 ISKLENLSQLELIRNRIDERGVQFISKMKNLTKLNLGENPIRNIGALYLSKMKQLKGLDL 318
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
+ D S+ L + L L+I L+ + + + K SLKL+
Sbjct: 319 DGTKIDDFSIEHLCLMKNLQYLNIERTNLSETKVETLK--ESLKLV 362
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
K+ D G+++L + +LE L LS + DG+ +S L+NLS L+L + + ++ +
Sbjct: 226 KIDDEGVEYLSLLQSLEYLSLSYNNIGNDGVQFISKLENLSQLELIRNRIDERGVQFISK 285
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
+ L L+L + + N GA L +L L+L T +
Sbjct: 286 MKNLTKLNLGENPIRNIGALYLSKMKQLKGLDLDGTKI 323
>gi|283779449|ref|YP_003370204.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
gi|283437902|gb|ADB16344.1| hypothetical protein Psta_1669 [Pirellula staleyi DSM 6068]
Length = 633
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK LDLS KVTD G++ L ++ L +L+L T +++ I ++ L+NL LDL + +
Sbjct: 499 LKWLDLS-LTKVTDTGLEQLDQLTQLNQLFLEGTAISSASIPAIARLRNLEELDLSKVNI 557
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
D L + L +L+ L L G+ V++ G A L L L+L T V+
Sbjct: 558 ADDDLAKIATLKQLKVLYLVGTPVTDAGLAKLVSLQNLEMLDLRGTRVS 606
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
LSL T + D ++ + LK++D+S T + TD T L+ L+ L +
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKV----------TD-----TGLEQLDQLTQ 522
Query: 303 LN---LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LN LE T +S A++ ++ + L L L ++ D L ++++L +L L + +T
Sbjct: 523 LNQLFLEGTAISSASIPAIARLRNLEELDLSKVNIADDDLAKIATLKQLKVLYLVGTPVT 582
Query: 360 NSGLGSFKPPRSLKLLDLHG 379
++GL ++L++LDL G
Sbjct: 583 DAGLAKLVSLQNLEMLDLRG 602
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 43/171 (25%)
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNEN 139
L L + V+++G A L F RL +L+L+ T VT D+ LE +
Sbjct: 478 LSLGRTTVTDQGLAQLGQFKRLKWLDLSLTKVT------------------DTGLEQLDQ 519
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM 199
L ++ L GT +S++S+ + +++ LE LDLS
Sbjct: 520 LTQLNQLFLEGTA--------------------ISSASIPA---IARLRNLEELDLSKVN 556
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQI 250
I DD + +A + L+ L L T + AG+ L L NLE+L L GT++
Sbjct: 557 IADDDLAKIATL-KQLKVLYLVGTPVTDAGLAKLVS-LQNLEMLDLRGTRV 605
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELELGYNQISNISPIAGLTALTSLELHENQLED--ISPISNLKNLTYLALYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|228938544|ref|ZP_04101152.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971423|ref|ZP_04132049.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978036|ref|ZP_04138415.1| Internalin [Bacillus thuringiensis Bt407]
gi|228781697|gb|EEM29896.1| Internalin [Bacillus thuringiensis Bt407]
gi|228788290|gb|EEM36243.1| Internalin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228821142|gb|EEM67159.1| Internalin [Bacillus thuringiensis serovar berliner ATCC 10792]
Length = 766
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|423472694|ref|ZP_17449437.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
gi|402427629|gb|EJV59734.1| hypothetical protein IEM_03999 [Bacillus cereus BAG6O-2]
Length = 752
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 276
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 277 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 225
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 342
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 280
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 341 QLSSLSKLTNLS-----IRD 355
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRD 475
>gi|242092912|ref|XP_002436946.1| hypothetical protein SORBIDRAFT_10g012050 [Sorghum bicolor]
gi|241915169|gb|EER88313.1| hypothetical protein SORBIDRAFT_10g012050 [Sorghum bicolor]
Length = 968
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 133/314 (42%), Gaps = 54/314 (17%)
Query: 23 LLSISTLEKLWLSET---GLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ LE L LS G T L SL+NL L+L G+P + V L L+KL+Y
Sbjct: 125 LLSLEHLEYLDLSMNSLEGATGQIPKFLGSLKNLEYLNLSGIPFSGRVPPHLGNLSKLQY 184
Query: 80 LDL-WGSQVSNRGAAVLKMFPRLSFLNLA---------WTGVTKLPNISSLECLNLSNCT 129
LD+ G+ + + L L +LNL W V + I SL L+LS+C
Sbjct: 185 LDISSGADTFSVDMSWLTRLQFLDYLNLKTVNLSTVADWPHVVNM--IPSLMFLDLSDCM 242
Query: 130 IDSILEG--NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLT 185
+ S + N L + L+G F + + + + L +L+++ + L
Sbjct: 243 LASANQSLRQLNHTDLEWLDLSGNYFHHRISSCWFWNLTSLEYLNLAFTGTYGHLPEALG 302
Query: 186 QMKALEHLDLSSSMIGDDSV---------------------------EMVACVGANLRNL 218
M +L+ +DLSS+ I V + C LR L
Sbjct: 303 SMISLQFIDLSSNKISMPMVNLENLCSLRIIHLESCFSYGNIEELIERLPRCSQNKLREL 362
Query: 219 NLSNTRFSSAGVGILA---GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
NL + + + G+L HL +L +L LS I +++ SL+ +D+S +
Sbjct: 363 NLQSNQLT----GLLPDFMDHLTSLFVLDLSWNNITGLLPAFLGNFTSLRTLDLSGNNFT 418
Query: 276 GFI-QQVGAETDLV 288
G + ++GA T+L
Sbjct: 419 GGLPYEIGALTNLA 432
>gi|218184060|gb|EEC66487.1| hypothetical protein OsI_32581 [Oryza sativa Indica Group]
Length = 1210
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 52/361 (14%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VT + K + + L+ L L L + LS+L NL+ L L G ++ + + L +
Sbjct: 248 QVTGSIPKEIGMLPNLQLLSLGNNTLNGEIPTTLSNLTNLATLYLWGNELSGPIPQKLCM 307
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN----ISSLECLNLSNC 128
LTK++YL+L +++++ A L +++ L L +T +P +++L+ L LSN
Sbjct: 308 LTKIQYLELNSNKLTSEIPACLSNLTKMNELYLDQNQITGSIPKEIGMLANLQVLQLSNN 367
Query: 129 TIDS-ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM 187
T+ I N LA + L G ++S + C LT+M
Sbjct: 368 TLSGEIPTALANLTNLATLKLYGN--------------------ELSGPIPQKLCTLTKM 407
Query: 188 KALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
+ L LS + + + E+ AC+ + L L + + + + G LPNL++L L
Sbjct: 408 QL---LSLSKNKL---TGEIPACLSNLTKVEKLYLYQNQVTGS-IPKEIGMLPNLQLLGL 460
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI-QQVGAETDL-VLSLTA---------- 293
++ + +S + +L + + + ++ G I Q++ T + LSL++
Sbjct: 461 GNNTLNGEIPTTLSNLTNLDTLSLWDNELSGHIPQKLCTLTKMQYLSLSSNKLTGEIPAC 520
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT-DVSLHQLSSLSKLTNLS 352
L NL +E+L L Q QV+ + + L L L N +L+ ++S ++LS LTNL+
Sbjct: 521 LSNLTKMEKLYLYQNQVTGSIPKEIGMLPNLQVLQLSNNTLSGEIS----TALSNLTNLA 576
Query: 353 I 353
I
Sbjct: 577 I 577
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 31/351 (8%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
K + ++ L+ L LS L + L++L NL+ L L G ++ + + L LTK++YL
Sbjct: 159 KEIGMLANLQSLNLSNNTLIGEIPITLANLTNLATLQLYGNELSGPIPQKLCTLTKMQYL 218
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--------LPNISSLECLNLSNCTIDS 132
L ++++ A L ++ L L VT LPN L+ L+L N T++
Sbjct: 219 SLSSNKLTGEIPACLSNLTKVEKLYLYQNQVTGSIPKEIGMLPN---LQLLSLGNNTLNG 275
Query: 133 ILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR---FCFLTQMK 188
+ N LA + L G L + T + +L+++++ L+ C L+ +
Sbjct: 276 EIPTTLSNLTNLATLYLWGNELSGPIPQKLCMLTK-IQYLELNSNKLTSEIPAC-LSNLT 333
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
+ L L + I + + + ANL+ L LSN S LA +L NL L L G
Sbjct: 334 KMNELYLDQNQITGSIPKEIGML-ANLQVLQLSNNTLSGEIPTALA-NLTNLATLKLYGN 391
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
++ + + ++ + +S + G I L NL +E+L L Q
Sbjct: 392 ELSGPIPQKLCTLTKMQLLSLSKNKLTGEIP------------ACLSNLTKVEKLYLYQN 439
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
QV+ + + L L L N +L LS+L+ L LS+ D L+
Sbjct: 440 QVTGSIPKEIGMLPNLQLLGLGNNTLNGEIPTTLSNLTNLDTLSLWDNELS 490
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 35/281 (12%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
+VT + K + + L+ L LS L+ + LS+L NL++L L G ++ + + L +
Sbjct: 536 QVTGSIPKEIGMLPNLQVLQLSNNTLSGEISTALSNLTNLAILSLWGNELSGPIPQKLCM 595
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI 133
LTK++YLDL ++++++ A PR F NL L N S L + C +
Sbjct: 596 LTKIQYLDLSSNKLTSKIPAC--SLPR-EFENLTGIADLWLDNNSFSGHLPANVCMGGRL 652
Query: 134 ----LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS-----FLDVSNSSLSRFCFL 184
+ GN P+ + SL T + + + + T +S + + + SLS F
Sbjct: 653 KTFMIGGNAFDGPIPR-SLKTCTSLVKLSVYNNLLTGDISEHFGVYPHLKSVSLSYNRFF 711
Query: 185 TQMKA-------LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
Q+ LE +D +MI L L+ +N S + G+L
Sbjct: 712 GQISPNWVASPQLEEMDFHKNMI------------TGLLRLDHNNI---SGEIPAEFGNL 756
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
+L ++LS Q+ Y + + + +L ++D+S ++ G I
Sbjct: 757 KSLYKINLSFNQLSGYLPAQLGKLSNLGYLDVSRNNLSGPI 797
>gi|125547014|gb|EAY92836.1| hypothetical protein OsI_14636 [Oryza sativa Indica Group]
Length = 668
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 54/330 (16%)
Query: 33 WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW-GSQVSNRG 91
+L G +SSL+NL L+ G+P+T +V L LTKL+YLDL G + +
Sbjct: 126 YLVVVGPAGQFPGFISSLRNLIYLNFSGMPLTGMVPPQLGNLTKLQYLDLSDGIDMYSTD 185
Query: 92 AAVLKMFPRLSFLNLAWTGVTKL---PNI----SSLECLNLSNC----TIDSILEGNENK 140
L P L +L+L+ ++++ P++ +L L L +C I SI++ N +
Sbjct: 186 IQWLTHLPSLRYLSLSNVNLSRISDWPHVMNMNVNLRALYLCDCFLTSAIQSIVQLNFTR 245
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLS-- 196
L ++ L+ F + + L +LD+S +++ S +++ +L+ LDLS
Sbjct: 246 --LEELDLSQNNFHQPLAYCWFWNLTSLKYLDLSGNNIVGSLPAAVSKFTSLDTLDLSEN 303
Query: 197 -----------------------SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGIL 233
+++ G+ + + +A + + L+ ++LS+ ++ VG
Sbjct: 304 QFFGCIPYEISMLTSLTRINLRVNNLTGEITEKHLAGLKS-LKTIDLSSNQYLKIVVGPE 362
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-----KGFIQQVGAETDLV 288
LE+ Q+ S++ M +K +DIS+T I F TDLV
Sbjct: 363 WQPPFRLEVAIFGSCQLGPMFPSWLQWMVDIKELDISSTGITDQLPHWFWTTFSKATDLV 422
Query: 289 L-------SLTALQNLNHLERLNLEQTQVS 311
+ SL A LERL L Q++
Sbjct: 423 ISSNNISGSLPANMETMSLERLYLGYNQIT 452
>gi|110755367|ref|XP_001120678.1| PREDICTED: toll-like receptor 13-like isoform 1 [Apis mellifera]
gi|328787378|ref|XP_003250935.1| PREDICTED: toll-like receptor 13-like isoform 2 [Apis mellifera]
Length = 671
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 169/420 (40%), Gaps = 58/420 (13%)
Query: 7 LDLSRCVKVTDAGMKHL-----LSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
LDL+ C G++HL + + L KL LS L L NL L L
Sbjct: 157 LDLNSC------GIRHLNTQFFHNTTNLNKLDLSHNPLGQIKPGPFDHLANLEYLKLNAC 210
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLAWTGVTKLP----- 115
+T + + L L L++ + + +VL RL +LN+ TG+T LP
Sbjct: 211 NLTHISSIAFAHLENLRELEMAENDLRTLSWTSVLAPLVRLEYLNIRKTGITNLPGDAFA 270
Query: 116 --------------------------NISSLECLNLSNCTIDSIL--EGNENKAPLAKIS 147
N+ SL+ L+LSNC + L E +N + L ++
Sbjct: 271 QNLYLRQLVLADNELWHLDVGNTLGHNLHSLQSLDLSNCNLQDRLSEEAFKNASKLRVLN 330
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM-KALEHLDLSSSMIGDDSVE 206
L+G + L L +SN SL R + K LE LD+S + + + V
Sbjct: 331 LSGNPMFAADLTVVLRHLPKLHKLSLSNCSLQRLPNAFHIFKHLEELDISHNPLTNAFVS 390
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 266
++ + + L L++S G A H+ L+ L LSG ++ + + L+
Sbjct: 391 LLNPLES-LEYLDMSYCNLGYVGNNTFA-HMTFLKKLILSGNKLHTLEEGLFANLTRLES 448
Query: 267 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQV-SDATLFPLSTFKELI 325
++++N D+K I L + L +L+ +V D L P + L
Sbjct: 449 LELNNCDLKTPIDPKVFGDRLTTDIIEL-------KLSGNSLEVPDDGPLLP-TQLSNLE 500
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS-GLGSFKPPRSLKLLDLHGGWLLT 384
L L N +LT ++ + ++ LT L++ ++ + L K R L+ LDL L T
Sbjct: 501 ILDLSNCNLTHLNENLFTTTKNLTQLNLSSNTISGTENLACLKKLRMLEHLDLSNNSLST 560
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 103/258 (39%), Gaps = 31/258 (12%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
H L TL L L+ G+ + NL+ LDL P+ + L LEYL
Sbjct: 147 HFLKCRTLLYLDLNSCGIRHLNTQFFHNTTNLNKLDLSHNPLGQIKPGPFDHLANLEYLK 206
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLA--------WTGVTKLPNISSLECLNLSNCTIDSI 133
L +++ + L L +A WT V L + LE LN+ I +
Sbjct: 207 LNACNLTHISSIAFAHLENLRELEMAENDLRTLSWTSV--LAPLVRLEYLNIRKTGITN- 263
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
L + A ++ + L + + L LDV N+ + +L+ L
Sbjct: 264 ---------LPGDAFAQNLYLRQ----LVLADNELWHLDVGNT------LGHNLHSLQSL 304
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
DLS+ + D E + LR LNLS +A + ++ HLP L LSLS +
Sbjct: 305 DLSNCNLQDRLSEEAFKNASKLRVLNLSGNPMFAADLTVVLRHLPKLHKLSLSNCSLQRL 364
Query: 254 AISYMSMMPSLKFIDISN 271
++ + L+ +DIS+
Sbjct: 365 PNAF-HIFKHLEELDISH 381
>gi|104646975|gb|ABF74111.1| disease resistance protein [Arabidopsis thaliana]
Length = 585
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + + P+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEEFPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|46445968|ref|YP_007333.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399609|emb|CAF23058.1| hypothetical protein pc0334 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 616
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGLP 62
L+ L+L C K+TD G+ HL S+ L+ L L LT G+A L L NL L+L P
Sbjct: 371 LQHLNLHWCDKLTDDGLAHLRSLVNLQHLNLHCCNKLTDAGLAHLRPLVNLQHLNLSKCP 430
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFP--RLSFLNLAWT------GVTK 113
+TD L L L L++LDL ++ GA + + P L +LNL G+
Sbjct: 431 KLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCCNELTDIGLMH 490
Query: 114 LPNISSLECLNLSNC 128
L + +L+ L+LS C
Sbjct: 491 LTPLVNLQHLDLSGC 505
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGL--TADGIALLSSLQNLSVLDLGGL 61
L+ L+LS+C K+TDAG+ HL + L+ L LS L T G+A L+ L +L L+L
Sbjct: 421 LQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAGLAYLAPLIDLQYLNLCCC 480
Query: 62 -PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TD+ L L L L++LDL G NL G+ L ++ +L
Sbjct: 481 NELTDIGLMHLTPLVNLQHLDLSGCD------------------NLTDAGLMHLTSLVNL 522
Query: 121 ECLNLSNC 128
+ LNL C
Sbjct: 523 QHLNLRCC 530
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKL---WLSETGLTADGIALLSSLQNLSVLDLG 59
L+ L+LS + +TDAG+ HL + L+ L W + LT DG+A L SL NL L+L
Sbjct: 345 LRHLNLSGDMSNLTDAGLAHLTPLVNLQHLNLHWCDK--LTDDGLAHLRSLVNLQHLNLH 402
Query: 60 GL-PVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFLNLAW-------TG 110
+TD L L+ L L++L+L ++++ G A L L L+L+W G
Sbjct: 403 CCNKLTDAGLAHLRPLVNLQHLNLSKCPKLTDAGLAHLTPLVNLQHLDLSWCPLNFTGAG 462
Query: 111 VTKLPNISSLECLNLSNC 128
+ L + L+ LNL C
Sbjct: 463 LAYLAPLIDLQYLNLCCC 480
>gi|384185344|ref|YP_005571240.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|410673634|ref|YP_006926005.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452197655|ref|YP_007477736.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|326939053|gb|AEA14949.1| internalin [Bacillus thuringiensis serovar chinensis CT-43]
gi|409172763|gb|AFV17068.1| internalin-A [Bacillus thuringiensis Bt407]
gi|452103048|gb|AGF99987.1| internalin, putative [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 760
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|297808737|ref|XP_002872252.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318089|gb|EFH48511.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 168/394 (42%), Gaps = 45/394 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSSL-QNLSVLDLGG 60
L+EL + +C+ ++D G+ ++ S L K+ L +D GI LL + + L LD+
Sbjct: 148 LRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKMCKGLKSLDVSY 207
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
L +T+ +RS+ +L KLE LD+ + + L FL G L +
Sbjct: 208 LKITNDSIRSIALLLKLEVLDMVSCPLIDDAG--------LQFLE---NGSPSLQEVDVT 256
Query: 121 ECLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
C +S + SI+ G+ + L +S +F+ +A +++T + VS+SS
Sbjct: 257 RCERVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLQYIKALKHLKTIWIDGAHVSDSS 316
Query: 178 LSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRF-SSAGVGILAG 235
L + ++L + LS + + D + A NL+ LNL+ F + + +A
Sbjct: 317 LVT--LSSSCRSLVEIGLSRCVDVTDIGMMGFARNCLNLKTLNLACCGFVTDVAISAVAQ 374
Query: 236 HLPNLEILSLSGTQ-IDDYAI----SYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
NLE L L I + + Y ++ L D + +G
Sbjct: 375 SCRNLETLKLESCHLITEKGLQSLGCYSKLLQELDLTDCYGVNDRG-------------- 420
Query: 291 LTALQNLNHLERLNLE-QTQVSDATLFPL-STFKELIHLSL-RNASLTDVSLHQLSSLSK 347
L + ++L+RL L T +SD +F + S +L+ L L R A D L LS K
Sbjct: 421 LEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCK 480
Query: 348 LTNLSIRDAV--LTNSGLGSFKPPRSLKLLDLHG 379
N I LT++G+ + L L+L G
Sbjct: 481 SLNRLILSYCCELTDTGVEQIRQLELLSHLELRG 514
>gi|77551578|gb|ABA94375.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
Length = 1500
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 23 LLSISTLEKLWLSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ L+ L LS L+ DG + S +NL L+L G+P +V L L+KL++
Sbjct: 105 LLSLEHLQHLDLSWNNLSGSDGHIPGFIGSFRNLRYLNLSGMPFIGVVPPQLGNLSKLQF 164
Query: 80 LDL---WGSQVSNR-GAAVLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNC 128
LDL G ++ +R G L+ P L +LNL ++ + N + SL LNLSNC
Sbjct: 165 LDLSSCIGLEMQSRSGMTWLRNIPLLQYLNLNSVDLSAVDNWLHVMNQLPSLRVLNLSNC 224
Query: 129 TI----DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-- 182
++ + + N L ++ L+G F + + + + L L +S + L
Sbjct: 225 SLQRADQKLTHLHNNFTRLERLDLSGNQFNHPAASCWFWNITSLKDLILSGNRLYGQLPD 284
Query: 183 FLTQMKALEHLDLS--------------------SSMIGDDSVEMVACVGANLRNL 218
L M +L+ LD S SS D ++E + + NLRNL
Sbjct: 285 ALADMTSLQVLDFSINRPVPISPIGLLPSSQAPPSSGDDDAAIEGITIMAENLRNL 340
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
S+L L LS+ LT + + L+NL+ +DL + L + +LT L Y+DL +
Sbjct: 393 FSSLVYLDLSQNYLTGQLPSEIGMLRNLTWMDLSYNGLVHLP-PEIGMLTNLAYIDLGHN 451
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDSILEGN-- 137
S+ + + M L +L+L++ + +++SLE + L +++ +++
Sbjct: 452 NFSHLPSEI-GMLSNLGYLDLSFNNLDGVITEKHFAHLASLESIYLPYNSLEIVVDPEWL 510
Query: 138 -----------------------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ + + ++ +A T+ + + + S ++LD+S
Sbjct: 511 PPFRLKYAYFYCCQMGPMFPKWLQTQVDIIELDIANTSIKDTFPEWFWTTVSKATYLDIS 570
Query: 175 NSSLSRFCFLTQMKA--LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
N+ + R T M+ LE L S++I + E+ NL L++SN S G
Sbjct: 571 NNQI-RGGLPTNMETMLLETFYLDSNLITGEIPELP----INLETLDISNNYLS----GP 621
Query: 233 LAGHL--PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L ++ PNL L+L QI + Y+ + +L+ +D+ N +G
Sbjct: 622 LPSNIGAPNLAHLNLYSNQISGHIPGYLCNLGALEALDLGNNRFEG 667
>gi|401414351|ref|XP_003871673.1| hypothetical protein LMXM_03_0010 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487892|emb|CBZ23136.1| hypothetical protein LMXM_03_0010 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 977
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 193/436 (44%), Gaps = 74/436 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-P 62
L+ L L C ++ D + L + L +++L+ TG++ + AL S L V+ +GG
Sbjct: 534 LQCLFLGGCSRIRDISL--LTQATQLREVYLTNTGIS-NIEALKPSAATLEVIAIGGCGR 590
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG----VTKLPNIS 118
++D+ L V TKL + LWG+ ++N A + L L++ G ++ L N +
Sbjct: 591 ISDIA--PLLVATKLRLVYLWGTNINNIHAIRFSI-SSLEVLDIGGCGRVSEISSLLNAT 647
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE----------REAFLYIETSLL 168
L + L N I SI + L + L G T I++ RE +Y+ + +
Sbjct: 648 KLREVRLHNTAIQSIEALRPSAGCLEWVELVGCTHISDISPLSTATKLRE--VYLTNTAV 705
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD------------DSVEMVACVGANLR 216
S +D S S + E DLS+ +S++ +A A+LR
Sbjct: 706 SSIDPLRCSASSLEVIALGNCAEVFDLSALATATKLREAYLWGTKINSIKALASSIASLR 765
Query: 217 NLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
L ++ T S + A L +++ + T ID + + + PSL+FI++S +
Sbjct: 766 ILEVTRCTNISDVSILSAAVRLRRVDLANTCITSID----ALVPVAPSLEFINVSGCPMI 821
Query: 276 GFIQQVGAETDLV---LSLTALQNLNHLERL--NLEQTQVS------DATLFPLSTFKEL 324
+GA T++ + L +LN L + LE+ VS D + L+T +L
Sbjct: 822 TDFAPLGAATNVKTVWMRKLRLDSLNALRPVTGTLEKVDVSGCLNLRDISALELAT--KL 879
Query: 325 IHLSLRNAS-------------LTDVSLHQLSSLSKLTNL----SIRDAVLTNSGLGSFK 367
+SL+N S LT V+ + +L+ + L +++ L+N+ + S +
Sbjct: 880 TEVSLQNTSIESLDALKSSAPVLTAVNANNCINLTSIEALVSATRLKEVKLSNTRISSLQ 939
Query: 368 PPRS----LKLLDLHG 379
P R+ L+++D+ G
Sbjct: 940 PLRASGACLQIVDISG 955
>gi|222616161|gb|EEE52293.1| hypothetical protein OsJ_34286 [Oryza sativa Japonica Group]
Length = 1561
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 23 LLSISTLEKLWLSETGLTA-DG--IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
LLS+ L+ L LS L+ DG + S +NL L+L G+P +V L L+KL++
Sbjct: 105 LLSLEHLQHLDLSWNNLSGSDGHIPGFIGSFRNLRYLNLSGMPFIGVVPPQLGNLSKLQF 164
Query: 80 LDL---WGSQVSNR-GAAVLKMFPRLSFLNLAWTGVTKLPN-------ISSLECLNLSNC 128
LDL G ++ +R G L+ P L +LNL ++ + N + SL LNLSNC
Sbjct: 165 LDLSSCIGLEMQSRSGMTWLRNIPLLQYLNLNSVDLSAVDNWLHVMNQLPSLRVLNLSNC 224
Query: 129 TI----DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-- 182
++ + + N L ++ L+G F + + + + L L +S + L
Sbjct: 225 SLQRADQKLTHLHNNFTRLERLDLSGNQFNHPAASCWFWNITSLKDLILSGNRLYGQLPD 284
Query: 183 FLTQMKALEHLDLS--------------------SSMIGDDSVEMVACVGANLRNL 218
L M +L+ LD S SS D ++E + + NLRNL
Sbjct: 285 ALADMTSLQVLDFSINRPVPISPIGLLPSSQAPPSSGDDDAAIEGITIMAENLRNL 340
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 46/286 (16%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
S+L L LS+ LT + + L+NL+ +DL + L + +LT L Y+DL +
Sbjct: 393 FSSLVYLDLSQNYLTGQLPSEIGMLRNLTWMDLSYNGLVHLP-PEIGMLTNLAYIDLGHN 451
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGV------TKLPNISSLECLNLSNCTIDSILEGN-- 137
S+ + + M L +L+L++ + +++SLE + L +++ +++
Sbjct: 452 NFSHLPSEI-GMLSNLGYLDLSFNNLDGVITEKHFAHLASLESIYLPYNSLEIVVDPEWL 510
Query: 138 -----------------------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ + + ++ +A T+ + + + S ++LD+S
Sbjct: 511 PPFRLKYAYFYCCQMGPMFPKWLQTQVDIIELDIANTSIKDTFPEWFWTTVSKATYLDIS 570
Query: 175 NSSLSRFCFLTQMKA--LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
N+ + R T M+ LE L S++I + E+ NL L++SN S G
Sbjct: 571 NNQI-RGGLPTNMETMLLETFYLDSNLITGEIPELP----INLETLDISNNYLS----GP 621
Query: 233 LAGHL--PNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L ++ PNL L+L QI + Y+ + +L+ +D+ N +G
Sbjct: 622 LPSNIGAPNLAHLNLYSNQISGHIPGYLCNLGALEALDLGNNRFEG 667
>gi|423455119|ref|ZP_17431972.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
gi|401134902|gb|EJQ42509.1| hypothetical protein IEE_03863 [Bacillus cereus BAG5X1-1]
Length = 752
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 225
L LD+SN+ ++ LT+MK D++S + + +E VA + L LN++N +
Sbjct: 288 LESLDLSNNKITNVAPLTEMK-----DVTSLYLAGNQIEDVAPLAKMEQLDYLNVANNKI 342
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 280
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 343 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 399
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 400 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 455
Query: 341 QLSSLSKLTNLS-----IRD 355
+S+L KL LS IRD
Sbjct: 456 PVSNLKKLVFLSFVANEIRD 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 244 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 299
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 276
+ V L + ++ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 300 N--VAPLT-EMKDVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 354
Query: 277 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 355 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 412
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
LS +L L+L N L D++ LSSL L L +
Sbjct: 413 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 447
>gi|423555811|ref|ZP_17532114.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
gi|401196153|gb|EJR03099.1| hypothetical protein II3_01016 [Bacillus cereus MC67]
Length = 691
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 43/217 (19%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ + F T +K L+HL L ++ I V++ V NL +L+LSN + +
Sbjct: 183 LKSLTVANAKIKDPSFFTNLKQLKHLALRANEI----VDVTPLVKMDNLESLDLSNNKIT 238
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 276
+ V L + N+ L L+G QI+D ++ ++ M L +++++N I
Sbjct: 239 N--VAPLT-EMKNVTSLYLAGNQIED--VAPLAKMEQLDYLNVANNKISNVAPLSKLKNV 293
Query: 277 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ G + DLVL+ L+ + LN L+ L + + ++ D T P
Sbjct: 294 TYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQELWIGKNEIKDVT--P 351
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
LS +L L+L N L D++ LSSL L L +
Sbjct: 352 LSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLE 386
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRF 225
L LD+SN+ ++ LT+MK + L L+ + I D VA + L LN++N +
Sbjct: 227 LESLDLSNNKITNVAPLTEMKNVTSLYLAGNQIED-----VAPLAKMEQLDYLNVANNKI 281
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTDIKGFIQQ 280
S+ V L+ L N+ LSL+G QI+D Y + L K D+S D +Q+
Sbjct: 282 SN--VAPLS-KLKNVTYLSLAGNQIEDITPLYTLPLKDLVLTRNKVKDLSGIDQLNQLQE 338
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+ + + +T L + L+ LNL ++ D T PLS+ L L L ++D L
Sbjct: 339 LWIGKNEIKDVTPLSKMTQLKVLNLPNNELKDIT--PLSSLVNLQKLDLEANYISD--LT 394
Query: 341 QLSSLSKLTNLS-----IRDA 356
+S+L KL LS IRD
Sbjct: 395 PVSNLKKLVFLSFVANEIRDV 415
>gi|224110020|ref|XP_002333160.1| predicted protein [Populus trichocarpa]
gi|222835013|gb|EEE73462.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 23/339 (6%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
+ +L NL LDL + + +L +L+ L ++DL G+Q++ + L +L+L
Sbjct: 266 IRNLTNLEYLDLSSNILGGSIPSTLGLLSNLNFVDLLGNQINGPIPLKIGNLTNLQYLHL 325
Query: 107 AWTGVT-----KLPNISSLECLNLSNCTID-SILEGNENKAPLAKISLAGTTFINEREAF 160
+T L N+ SL L+LS+ I+ SI +N L ++ L+ + +
Sbjct: 326 GGNKITGFIPFSLGNLKSLTMLDLSHNQINGSIPLEIQNLTNLKELYLSSNSISGSIPST 385
Query: 161 LYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
L + ++L+S LD+S++ ++ L + +L LDLS + I + S + NL+ L
Sbjct: 386 LGLLSNLIS-LDLSDNQITGLIPFLLGNLTSLIILDLSHNQI-NGSTPLETQNLTNLKEL 443
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
LS+ S + L G L NL L LS QI + + SL +D+S+ I G
Sbjct: 444 YLSSNSISGSIPSTL-GLLSNLISLDLSDNQITGLIPFLLGNLTSLIILDLSHNQING-- 500
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
ET QNL +L+ L L +S + L L L L N +T +
Sbjct: 501 -STPLET---------QNLTNLKELYLSSNSISGSIPSTLGLLSNLTFLDLSNNQITGLI 550
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L +L+ LT L + + S S K +L LDL
Sbjct: 551 PFLLDNLTNLTTLYLSHNQINGSIPSSLKYCNNLAYLDL 589
>gi|114568006|ref|YP_755160.1| leucine-rich repeat-containing protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114338941|gb|ABI69789.1| Leucine-rich repeat (LRR) protein-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 1351
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 64/312 (20%)
Query: 19 GMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLE 78
G++H S L+ L+L+ G+T + L SL+NL LD+ +TD L L L+ L+
Sbjct: 724 GIQHFTS---LQTLYLAGNGITD--LTPLQSLRNLQYLDISNNAITD--LGPLTKLSNLQ 776
Query: 79 YLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-GVTKLPNISSLECLNLSNCTIDSILEGN 137
LD +Q+++ A L L +L+ ++ GV L + +L + L++ I I + N
Sbjct: 777 GLDFSYNQLTDIQA--LANLTDLRYLDFSYNDGVGVLEPLRNL--IGLTDLFIAGIRDSN 832
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
+ L +S +T I A L L LD+SN+ L F+ Q+ L+ +D S+
Sbjct: 833 PAQVALCSVSSNQSTDIGAILAGL----KNLENLDISNNELPDITFVNQLPNLKTIDASN 888
Query: 198 SMIGDDS-VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
+ I D + +E L NLE +SL I +IS
Sbjct: 889 NTIVDTTPLET-----------------------------LSNLEKVSLYNNNIT--SIS 917
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 316
+ +PSL+ I+IS + G Q ++ L +L +L+L +SD L
Sbjct: 918 SLVKIPSLQEINISGNQVGGISQ--------------IEQLANLTKLDLTANPISD--LT 961
Query: 317 PLSTFKELIHLS 328
PL+ ++ + ++
Sbjct: 962 PLTLLQDTVEVN 973
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 53/216 (24%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD------------------DSVEMVA 209
L +LD+SN++++ LT++ L+ LD S + + D D V ++
Sbjct: 753 LQYLDISNNAITDLGPLTKLSNLQGLDFSYNQLTDIQALANLTDLRYLDFSYNDGVGVLE 812
Query: 210 ----CVG------ANLRNLNLSNTRF------SSAGVGILAGHLPNLEILSLSGTQIDDY 253
+G A +R+ N + S +G + L NLE L +S ++ D
Sbjct: 813 PLRNLIGLTDLFIAGIRDSNPAQVALCSVSSNQSTDIGAILAGLKNLENLDISNNELPD- 871
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
I++++ +P+LK ID SN + ++ T L+ L++LE+++L ++
Sbjct: 872 -ITFVNQLPNLKTIDASN--------------NTIVDTTPLETLSNLEKVSLYNNNIT-- 914
Query: 314 TLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKL 348
++ L L +++ + +S + QL++L+KL
Sbjct: 915 SISSLVKIPSLQEINISGNQVGGISQIEQLANLTKL 950
>gi|104646927|gb|ABF74087.1| disease resistance protein [Arabidopsis thaliana]
gi|104646941|gb|ABF74094.1| disease resistance protein [Arabidopsis thaliana]
gi|104646945|gb|ABF74096.1| disease resistance protein [Arabidopsis thaliana]
gi|104646947|gb|ABF74097.1| disease resistance protein [Arabidopsis thaliana]
gi|104646953|gb|ABF74100.1| disease resistance protein [Arabidopsis thaliana]
gi|104646955|gb|ABF74101.1| disease resistance protein [Arabidopsis thaliana]
gi|104646957|gb|ABF74102.1| disease resistance protein [Arabidopsis thaliana]
gi|104646963|gb|ABF74105.1| disease resistance protein [Arabidopsis thaliana]
gi|104646969|gb|ABF74108.1| disease resistance protein [Arabidopsis thaliana]
gi|104646993|gb|ABF74120.1| disease resistance protein [Arabidopsis thaliana]
gi|104647013|gb|ABF74130.1| disease resistance protein [Arabidopsis thaliana]
gi|104647015|gb|ABF74131.1| disease resistance protein [Arabidopsis thaliana]
gi|104647029|gb|ABF74138.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + + P+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEEFPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|296123881|ref|YP_003631659.1| serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
gi|296016221|gb|ADG69460.1| Serine/threonine protein kinase-related protein [Planctomyces
limnophilus DSM 3776]
Length = 1655
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 39 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
LT + QNLS L L + +TD LR+ + T + L L G V+++G +
Sbjct: 1435 LTPRDFEIFKGCQNLSDLQLLNMGITDEHLRAFEGTTSITKLKLDGQAVTSKGLSYFSGC 1494
Query: 99 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF----I 154
RL+FL++ W I S+ + + ++L GT I
Sbjct: 1495 KRLTFLSV-WATQADDKFIQSIASPDYT------------------YLNLGGTRITDASI 1535
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
E+ +E + L+F +++ + L + L +L L+ + + D S ++ +
Sbjct: 1536 AAFESLQNLEMATLNFTGLTDEGIEH---LASAENLTYLGLNHTRLTDASAKVFLKLN-Q 1591
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID-DYAISYMSMMPSLKFI 267
L L LSNT+FS G+ +L LPNL+ L+L T++ D + S+ P + +
Sbjct: 1592 LEELTLSNTQFSDQGLLLLVNALPNLKRLNLLETKVTADSVDKFQSLHPKCRIL 1645
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 13 VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
++TDA + S+ LE L+ TGLT +GI L+S +NL+ L L +TD +
Sbjct: 1528 TRITDASIAAFESLQNLEMATLNFTGLTDEGIEHLASAENLTYLGLNHTRLTDASAKVFL 1587
Query: 73 VLTKLEYLDLWGSQVSNRGAAVL-KMFPRLSFLNLAWTGVT 112
L +LE L L +Q S++G +L P L LNL T VT
Sbjct: 1588 KLNQLEELTLSNTQFSDQGLLLLVNALPNLKRLNLLETKVT 1628
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 146/376 (38%), Gaps = 42/376 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+ LDL ++T + ++S L L+ T + +A L L+ L L +
Sbjct: 1240 FRNLDLG-GTRITGKALAAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALYNTGI 1298
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLE 121
D +R + L L L+L GS+V+N L P L ++L +T VT + + +
Sbjct: 1299 GDEGVREICELKALRSLELQGSKVTNEVFFYLMKLPHLLSVDLRYTQVTPEAIESFRKQK 1358
Query: 122 CLNLSNCTIDSILEGNENKAPLAK---ISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
L C + N L K A F+ ++ +++++ + L + L
Sbjct: 1359 PLCEVKCDAGVLPRWEPNGDELVKNAKADRAAAAFVLKQGKYVWLDNAK-DPLHGDPAIL 1417
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
F +LE L ++ D C NL +L L N +GI HL
Sbjct: 1418 PPHLFKLTGISLEGL---KTLTPRDFEIFKGC--QNLSDLQLLN-------MGITDEHLR 1465
Query: 239 NLE------ILSLSGTQIDDYAISYMSMMPSLKFIDI--SNTDIKGFIQQVGAETDLVLS 290
E L L G + +SY S L F+ + + D K FIQ + A D
Sbjct: 1466 AFEGTTSITKLKLDGQAVTSKGLSYFSGCKRLTFLSVWATQADDK-FIQSI-ASPDYTY- 1522
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
LNL T+++DA++ + + L +L LTD + L+S LT
Sbjct: 1523 ------------LNLGGTRITDASIAAFESLQNLEMATLNFTGLTDEGIEHLASAENLTY 1570
Query: 351 LSIRDAVLTNSGLGSF 366
L + LT++ F
Sbjct: 1571 LGLNHTRLTDASAKVF 1586
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L+LS+C KVT A ++ ++ LE W G D +A L LDLGG +
Sbjct: 1195 LTHLELSQCEKVTGAAIRKFKHLTHLEA-WAVPVG--DDDLAPLKD-NPFRNLDLGGTRI 1250
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
T L + L+ L L + + N+ A LK RL+FL L TG+
Sbjct: 1251 TGKALAAFTNLSDLRSSRLAFTSIKNKDLAALKDCHRLTFLALYNTGI 1298
>gi|357511817|ref|XP_003626197.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501212|gb|AES82415.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 605
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 164/388 (42%), Gaps = 60/388 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGG 60
LKE+++ +C+ VTD G+ + + S LEKL L +D GI LLS +L+ LD+
Sbjct: 186 LKEINMDKCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSY 245
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
L VT+ LRS+ L KLE + G + + L FL G L I
Sbjct: 246 LKVTNESLRSIASLLKLEVFIMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVS 294
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL---------LSFL 171
C +S + S++ G+E G IN + L LS +
Sbjct: 295 RCNCVSPSGLLSVISGHE-----------GLEQINAGHCLSELSAPLTNGLKNLKHLSVI 343
Query: 172 DVSNSSLSRFCFL---TQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-S 226
+ +S F + K+L L LS IG ++ ++ VG NL L+L+ RF +
Sbjct: 344 RIDGVRVSDFILQIIGSNCKSLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVT 402
Query: 227 SAGVGILAGHLPNLEILSLSG----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQ 279
A + +A PNL L L T+I Y I S M+ L D S DI ++
Sbjct: 403 DAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLS 462
Query: 280 QVGAETDLVLSLTA----------LQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHL 327
+ L L L N L L+L + ++ D L L+T +L L
Sbjct: 463 RCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAML 522
Query: 328 SLRNAS-LTDVSLHQLSSLSKLTNLSIR 354
+L + +TD L +S+L +L++ +R
Sbjct: 523 NLAYCNRITDAGLKCISNLGELSDFELR 550
>gi|229144033|ref|ZP_04272449.1| Internalin [Bacillus cereus BDRD-ST24]
gi|228639430|gb|EEK95844.1| Internalin [Bacillus cereus BDRD-ST24]
Length = 755
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 273
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 274 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 330
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 331 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 379
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 380 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 428
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 429 --PLSSLVNLQKLDLE 442
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 293
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 294 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 363 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|423382828|ref|ZP_17360084.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|423530712|ref|ZP_17507157.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
gi|401643688|gb|EJS61382.1| hypothetical protein ICE_00574 [Bacillus cereus BAG1X1-2]
gi|402446046|gb|EJV77910.1| hypothetical protein IGE_04264 [Bacillus cereus HuB1-1]
Length = 760
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVTPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VTPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|380022016|ref|XP_003694851.1| PREDICTED: chaoptin-like [Apis florea]
Length = 1073
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 182/437 (41%), Gaps = 70/437 (16%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
+ +EKL +S L++ + + + L+ L LDL G + +L + L EYLDL +
Sbjct: 171 AKIEKLEISNGTLSSLPVEVFAPLKKLKRLDLHGNKIKELKRNQFKGLRDTEYLDLSHNL 230
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKA 141
+S + L ++ + N++ + L S L+ LNLS+ I L+ N +
Sbjct: 231 ISKLDGSHLADLTKMGWCNMSHNAIADLKRGTFARNSLLKVLNLSHNKIRK-LDSNTFRG 289
Query: 142 P--LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSS 197
L ++ L+ IN+ + + + +D++ + + + F Q++ E LD+S
Sbjct: 290 MRFLIRLYLSDNQ-INDVGRGTFGPVTRIGTIDLARNFIKKIDFQMFNQLQFAELLDVSE 348
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD----- 252
+ + +E ++ L ++LS S G + N+ +L LS ++++
Sbjct: 349 NFVT--VIEKLSFKDLYLTRIDLSRNEISKIEPGAFENCV-NITMLDLSHNKLENISKYS 405
Query: 253 -----YA----ISYMSM----------MPSLKFIDISNTDIKGFIQQVGAE------TDL 287
YA +SY + M LK +++S+ I +Q + DL
Sbjct: 406 FDSATYATELQLSYNQLTALNQVPLHNMTGLKVLNVSHNSIHSVPRQTFPKLYELHTIDL 465
Query: 288 V------LSLTALQNLNHLERLNLEQT---QVSDATLFPLSTFKELIHLSLRNASLTDVS 338
+ Q L L LNL ++ +T PL+T L+ L + LTDV+
Sbjct: 466 SHNNLSEIHNAVFQTLFSLRFLNLSHNSLDKIKPSTFGPLAT---LLELDMSYNRLTDVA 522
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 398
L+ L L++R+ LT F+ P SL LD WL + P +
Sbjct: 523 RSSLTRLPSCRRLTVRNNRLTK----IFQLPISLASLDFSENWL----------EEIPTV 568
Query: 399 EVWHELSVICPSDQIGS 415
+VW ++ + D G+
Sbjct: 569 DVWPTMNALLSLDLAGN 585
>gi|357141277|ref|XP_003572165.1| PREDICTED: receptor-like protein kinase HSL1-like [Brachypodium
distachyon]
Length = 978
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 153/356 (42%), Gaps = 32/356 (8%)
Query: 25 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 84
+ L LWL+ GL + A + +L+ L LDL +T + S+ L + ++L+
Sbjct: 189 GLPRLRVLWLAGCGLVGNIPASIGNLKRLVNLDLSTNNLTGEIPESIGGLESVVQIELYS 248
Query: 85 SQVSNRGAAVLKMFPRLSFLNLAWTGVT-KLPN----ISSLECLNLSNCTIDSILEGNEN 139
+++S R A L +L FL++A ++ ++P LE L+L + +
Sbjct: 249 NKLSGRVPAGLGKLKKLRFLDVAMNRLSGEIPPDLLLAPGLESLHLYENELSGRVPSTLG 308
Query: 140 KAP-LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS-----RFCFLTQMKALEHL 193
+AP L + L + E + + L F+D+S++ +S C +++ L L
Sbjct: 309 QAPALNDLRLFSNRLVGELPPE-FGKNCPLEFIDLSDNRISGRIPATLCSAGKLEQL--L 365
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
L++ + G E+ C L + L N R S V + LP+L +L L+G +
Sbjct: 366 ILNNELDGPIPAELGEC--RTLTRVRLPNNRLSGP-VPLDMWSLPHLYLLELAGNALSGT 422
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+++ +L + +S+ G + L +L NL L N + A
Sbjct: 423 VGPGIALAQNLSQLLLSDNHFAGVLPA---------ELGSLTNLVELSAANNGFSGPLPA 473
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS---GLGSF 366
TL LST L + LRN S++ + KLT L + D LT S GLG
Sbjct: 474 TLADLST---LGRIDLRNNSISGELPQGVRRWQKLTQLDLADNRLTGSIPPGLGEL 526
>gi|423629712|ref|ZP_17605460.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
gi|401266846|gb|EJR72915.1| hypothetical protein IK5_02563 [Bacillus cereus VD154]
Length = 760
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLFLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLFLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|390604154|gb|EIN13545.1| RNI-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 515
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 156/342 (45%), Gaps = 54/342 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIST--LEKLWLSETGLTADGIA-LLSSLQNLSVLDLGG 60
LK+L+L C KV DA + +S S L + L++T T IA L+ + +++ VL L G
Sbjct: 171 LKKLNLRGCTKV-DANVVATISRSCRLLTSVNLNQTSATPASIAALVLACRDIEVLKLAG 229
Query: 61 LPV--TDLVL-RSLQVLTKLEYLDLWG------SQVSNRGAAV---LKMFPRLSFLNLAW 108
+ TD R L + + E +L Q+ A++ LKM P L+ L+L++
Sbjct: 230 IQPNWTDAAFARFLSAVNETEGFELVKLRNLKLRQLGLGDASLHPLLKMVPNLNRLDLSF 289
Query: 109 TGVTKLP------NISSLECLNLSNCTI--DSILEGNENKAPLAKISLAGTTFINEREAF 160
TG+ LP +I LE L+L++ + D +L E+ L ++L R +
Sbjct: 290 TGIRHLPKVDPDFSIPPLEKLSLTSTMVFTDDVLTAMEHLPRLKTLNLGALGASQGRASL 349
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEM----------VA 209
S S L ++ + L LT + A DL S++G+ + M +A
Sbjct: 350 -----SNSSALTMTPAMLRE---LTSILAERCPDLEVVSLVGNTKLGMGSRDPAVRDFIA 401
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHL------PNLEILSLSGTQIDDYAISYMSMMPS 263
VG + LN++ G LAG L P +E L+LS T +DD A Y+S S
Sbjct: 402 QVGRRCKTLNMAA--IPGLRSGDLAGLLSEGEGPPRIETLNLSNTSVDDEAAQYISCCES 459
Query: 264 LKFIDISNTDI--KGFIQQVGAETDL-VLSLTALQNLNHLER 302
L+ ++++ T G + A L L LT+ + + ++R
Sbjct: 460 LQTLEVAGTKFTPAGLFPIIDACEKLQTLDLTSCRGIKTVDR 501
>gi|296502010|ref|YP_003663710.1| internalin [Bacillus thuringiensis BMB171]
gi|423588187|ref|ZP_17564274.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
gi|296323062|gb|ADH05990.1| internalin [Bacillus thuringiensis BMB171]
gi|401226695|gb|EJR33229.1| hypothetical protein IIE_03599 [Bacillus cereus VD045]
Length = 760
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|229043169|ref|ZP_04190893.1| Internalin [Bacillus cereus AH676]
gi|228726176|gb|EEL77409.1| Internalin [Bacillus cereus AH676]
Length = 766
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|357511813|ref|XP_003626195.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501210|gb|AES82413.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 679
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 164/388 (42%), Gaps = 60/388 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGG 60
LKE+++ +C+ VTD G+ + + S LEKL L +D GI LLS +L+ LD+
Sbjct: 186 LKEINMDKCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSY 245
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
L VT+ LRS+ L KLE + G + + L FL G L I
Sbjct: 246 LKVTNESLRSIASLLKLEVFIMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVS 294
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL---------LSFL 171
C +S + S++ G+E G IN + L LS +
Sbjct: 295 RCNCVSPSGLLSVISGHE-----------GLEQINAGHCLSELSAPLTNGLKNLKHLSVI 343
Query: 172 DVSNSSLSRFCFL---TQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-S 226
+ +S F + K+L L LS IG ++ ++ VG NL L+L+ RF +
Sbjct: 344 RIDGVRVSDFILQIIGSNCKSLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVT 402
Query: 227 SAGVGILAGHLPNLEILSLSG----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQ 279
A + +A PNL L L T+I Y I S M+ L D S DI ++
Sbjct: 403 DAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLS 462
Query: 280 QVGAETDLVLSLTA----------LQNLNHLERLNLEQ-TQVSDATLFPLST-FKELIHL 327
+ L L L N L L+L + ++ D L L+T +L L
Sbjct: 463 RCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAML 522
Query: 328 SLRNAS-LTDVSLHQLSSLSKLTNLSIR 354
+L + +TD L +S+L +L++ +R
Sbjct: 523 NLAYCNRITDAGLKCISNLGELSDFELR 550
>gi|157868400|ref|XP_001682753.1| hypothetical protein LMJF_19_1640 [Leishmania major strain
Friedlin]
gi|68126208|emb|CAJ07269.1| hypothetical protein LMJF_19_1640 [Leishmania major strain
Friedlin]
Length = 673
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 72/397 (18%)
Query: 3 CLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTA------------DGIALLSS 49
CLK L L C +++ G +L S S+L++ + G A GI LLS+
Sbjct: 274 CLKSLQLRECPRLSHLGWNQILNSQSSLQESSGQDGGCAALLSVSVFRCPAFQGIGLLSA 333
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV-----SNRGAAVLKMFPRLSFL 104
+L + ++ L +L+ LE LD+ G Q + RGA L+ L
Sbjct: 334 APHLREFRAQRVRISSL--DALRECRHLELLDVGGCQQVCCIEALRGAKALRY---LDLS 388
Query: 105 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
N A + + L ++LE +NLS C L+ E L ++ + T E + +
Sbjct: 389 NTAVSDIGALSQCTALERVNLSGCLRLRSLDSLECCTELRELQASRTNI----ETLIGLR 444
Query: 165 -TSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGD----------DSVEMVACV- 211
L +DVS ++L LT + L H+DLS + + D +SV + C
Sbjct: 445 LCRALKKVDVSGCAALRDAAALTHLSQLTHVDLSFTAVDDVSSLAYYSGLESVRLRGCRY 504
Query: 212 ------------GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYM 258
LR+L+LSNT S + P LE L ++G T++ D IS +
Sbjct: 505 LRDYSPPHNLEDAPPLRSLDLSNTSVCS--ISEWGRCPPRLEKLRMNGCTRLSD--ISVL 560
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
L+ +D+ NT + + L+ AL+ L R++ T++SD ++ L
Sbjct: 561 QSSTGLRIVDLGNTSVHSI-------SPLISCAPALEEL----RMH-GCTELSDISV--L 606
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+ L + L N S+ VS +L++ S+L L I D
Sbjct: 607 QSASRLRVVDLDNTSVRSVSPLRLAA-SELEELRIND 642
>gi|290971150|ref|XP_002668393.1| predicted protein [Naegleria gruberi]
gi|284081777|gb|EFC35649.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
++ Q+K L L++ I D+ VE +A + L +L +S S GV I++ L
Sbjct: 104 YIGQLKQLTSLEIQGMDIDDEHVESMAEL-KQLTSLYISGNYIGSEGVKIISESFNKLTK 162
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L++S ID+ Y+S + L ++I+ D +G + LS L HL
Sbjct: 163 LNISANYIDNVGAKYISQLKQLTSLEIACND------SIGDAGIIYLS-----GLEHLTN 211
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
L++ + ++ + F++L L++ S+ D L +S L KL L I + ++ G
Sbjct: 212 LDISRIKIGSGGAQYIGKFEQLTCLNINTCSIDDEVLQSISQLKKLIVLHISENEISIEG 271
>gi|229108884|ref|ZP_04238489.1| Internalin [Bacillus cereus Rock1-15]
gi|228674653|gb|EEL29892.1| Internalin [Bacillus cereus Rock1-15]
Length = 766
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 390
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 391 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|406867766|gb|EKD20804.1| F-box domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 705
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 190/443 (42%), Gaps = 67/443 (15%)
Query: 4 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETG-LTADGI-ALLSSLQNLSVLDLGG 60
+K L++++ +D + L S + +E+L L+ G LT GI LL+ +L LD+ G
Sbjct: 149 IKRLNMAQLADTCSDGSVLALQSCNRIERLTLTNCGGLTDSGIVGLLNGSSHLLALDISG 208
Query: 61 L-PVTDLVLRSLQV-LTKLEYLDLWG-SQVSNRG----AAVLKMFPRLSF---LNLAWTG 110
+ VT+ + SL KL+ L++ G +++SN A K RL L +
Sbjct: 209 VFEVTETSMYSLAANCHKLQGLNISGCTKISNASMIAVAQQCKYIKRLKLNECEQLEDSA 268
Query: 111 VTKL----PNISSL---ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
+T PNI + +C ++ N + +++E + L ++ LA I++ EAFL +
Sbjct: 269 ITAFAENCPNILEIDLHQCKSIGNAPVTALIEHGQT---LRELRLANCELISD-EAFLPL 324
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHL---DLSSSM-IGDDSVEMVACVGANLRNLN 219
T+ K EHL DL+S + + D +VE + V LRNL
Sbjct: 325 STN---------------------KTFEHLRILDLTSCVRLTDRAVEKIIEVAPRLRNLV 363
Query: 220 LSNTRFSSAGVGILAGHL-PNLEILSLSG-TQIDDYAISYMSM-MPSLKFIDISNTDIKG 276
+ R + I L NL L L QI D+A+ + +++ID+
Sbjct: 364 FAKCRNLTDNAVIAISKLGKNLHYLHLGHCNQITDFAVKKLVQSCNRIRYIDL------- 416
Query: 277 FIQQVGAETDLVL-SLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASL 334
G T L S+T L L L R+ L + + +++A++ L+ RNA+
Sbjct: 417 -----GCCTHLTDDSVTKLATLPKLRRIGLVKCSNITNASVDALAQSSSHAPRHYRNAAG 471
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
+Q SSL ++ +LS + NS + L L L G + QFC+
Sbjct: 472 VLCEHNQTSSLERV-HLSYCINLTLNSIIKLLNSCPKLTHLSLTGVQAFLRADLEQFCRE 530
Query: 395 HPRIEVWHELSVICPSDQIGSNG 417
P H+ +V C +G G
Sbjct: 531 APAEFTEHQRNVFCVFSGMGVFG 553
>gi|389592901|ref|XP_001681716.2| putative surface antigen protein [Leishmania major strain Friedlin]
gi|321399718|emb|CAJ02964.2| putative surface antigen protein [Leishmania major strain Friedlin]
Length = 560
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 185 TQMKALEHLDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP----- 238
++MK+L +L+L + + G + V+ A+LR LNL T+ S G LP
Sbjct: 251 SEMKSLTNLELEGTQVSGSLPPQWVSM--ASLRTLNLEGTQVS--------GTLPPGWSE 300
Query: 239 --NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE----TDLVLSLT 292
+L L L GTQ+ S + SL+ +++ T + G + +E T+L L T
Sbjct: 301 MKSLTNLELEGTQVSGTLPPGWSSIKSLRTLNLEGTQVSGTLPPGWSEMKSLTNLELEGT 360
Query: 293 --------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
+ L LNLE TQVS A K L +L L L+ +
Sbjct: 361 QVSGTLPPGWSEMKSLRTLNLEGTQVSGALPPGWGEMKSLTNLYLEGTQLSGSLPTEWRG 420
Query: 345 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+ LTNL + ++ S + SL+ LDL G
Sbjct: 421 MKSLTNLYLEGTQVSGSLPPQWSSLTSLRTLDLEG 455
>gi|340057619|emb|CCC51965.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 872
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 151/389 (38%), Gaps = 88/389 (22%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T L+ L L CV++ + L S+ L L +S + ++G L++L+ L VL L
Sbjct: 301 TSLQHLTLDNCVRLRS--INCLGSLHRLHTLTVSRNRMPSEGFKGLANLRGLEVLRFAVL 358
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
L L S+ + L LDL + +++ G A L +L L LA+
Sbjct: 359 NRI-LTLESIAGIQCLRELDLTDNWLTDEGCAFLAHCSQLEHLKLAY------------- 404
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
C ++S+ + A ++T LS+ V N
Sbjct: 405 CRSVSD--------------------------VRWVRALTSLQTLDLSYTSVLN------ 432
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
CFL +++ L+ S D V++ VG N L+
Sbjct: 433 CFLDSLRSCSSLEELSLAYCKDVVDISFVVGLNC------------------------LK 468
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLE 301
L +SGT +D+ +S + P+L + + ++ VGA L L
Sbjct: 469 SLDVSGTCVDESGLSSVGKCPALTNLSLRECRQVAGLKFVGA-------------LKQLI 515
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTN 360
LN E T + D + ++ ++L LS RN LTDV L L L L + A +T+
Sbjct: 516 NLNAEGTGMLDGNIDHITCCQKLEVLSFRNCPFLTDVRC--LKDLGGLKALDLAGAYVTD 573
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
G+ + SL+ +D+ G L+T L
Sbjct: 574 EGVSTLSHCTSLESIDVSGCCLITHFGFL 602
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 160/369 (43%), Gaps = 71/369 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP- 62
L L L C +V AG+K + ++ L L TG+ I ++ Q L VL P
Sbjct: 491 LTNLSLRECRQV--AGLKFVGALKQLINLNAEGTGMLDGNIDHITCCQKLEVLSFRNCPF 548
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----------GVT 112
+TD +R L+ L L+ LDL G+ V++ G + L L ++++ G+T
Sbjct: 549 LTD--VRCLKDLGGLKALDLAGAYVTDEGVSTLSHCTSLESIDVSGCCLITHFGFLIGLT 606
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFL-YIETSLLSF 170
KL N+ + +N+ N +D +L K+P + ++SL + R +F+ ++ + L+
Sbjct: 607 KLRNVVA-NGMNVVN--VDGLL-----KSPSMERVSLVES----RRLSFVGHVAAARLTE 654
Query: 171 LDVSNSSLSRF--------CF------LTQMKALEHLD------------LSSSMIGDDS 204
L V NS++S C+ L Q A+ L L S+ + +S
Sbjct: 655 LSVENSNISNVGINAVLEGCYSLQRLSLQQCPAISDLQGVSLLPKLQELLLRSTAVSRES 714
Query: 205 VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 264
V +A NLR L +S+ V IL L +L L LS T + + ++ +L
Sbjct: 715 VAQIA-ACENLRRLQISDC-ADVTDVNILCS-LQSLVDLDLSKTNVTTGGVKGLAQCSAL 771
Query: 265 KFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
K +++S + V ++ L L L L L +T V+D + L ++L
Sbjct: 772 KKLNLS-------------DCRFVTNINCLGKLPVLRELYLCRTSVTDRGIAGLQHCRQL 818
Query: 325 IHLSLRNAS 333
L+L S
Sbjct: 819 ETLTLTKCS 827
>gi|242347124|gb|ACS92628.1| toll-like receptor 2 type 2 [Anas platyrhynchos]
Length = 783
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 29/261 (11%)
Query: 109 TGVTKLPNISSLE---CLNLSNCTIDSILEGNENKA----PLAKISLAGTTFINEREAFL 161
T + K+P + +E C L D ++ N++++ + K+S+ + +A L
Sbjct: 272 TILEKVPRLVEVEMKDCRLLGTGRWDLEIQANQSQSLRVLTIEKLSIEEFYLFTDLQAVL 331
Query: 162 YIETSLLSFLDVSNSSLSRF-CFLT-QMKALEHLDLSSSMIGDDSVEMVACVGAN--LRN 217
+ SL + + V N+ + C L+ Q+ +LE+LDLS++++GD S+E AC G L+
Sbjct: 332 DL-VSLFTKITVENTKVFLVPCRLSKQLLSLEYLDLSANLLGDQSLEHSACPGGWPLLKT 390
Query: 218 LNLSNTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMPS-LKFIDISNTDIK 275
LNLS S + + HL NL +L +S + I + P+ LK++++S T I
Sbjct: 391 LNLSQNSLSDFKMTAKSLSHLRNLILLDISQNNFGE--IPDVCEWPANLKYLNLSRTQIP 448
Query: 276 GFIQQVGAETDLV-LSLTALQNLN----HLERLNLEQTQVS---DATLFPLSTFKELIHL 327
+ + +++ +S L+ N L+ L L + Q+ DA P L+ L
Sbjct: 449 KLTACIPSTLEVLDISANNLKEFNLHLPFLKELYLAKNQLKALPDAASIP-----NLVAL 503
Query: 328 SLRNASLTDVSLHQLSSLSKL 348
S+R L S +L S K+
Sbjct: 504 SIRGNKLNSFSKEELESFKKM 524
>gi|357511815|ref|XP_003626196.1| F-box/LRR-repeat protein [Medicago truncatula]
gi|355501211|gb|AES82414.1| F-box/LRR-repeat protein [Medicago truncatula]
Length = 623
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 164/388 (42%), Gaps = 60/388 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTAD-GIALLS-SLQNLSVLDLGG 60
LKE+++ +C+ VTD G+ + + S LEKL L +D GI LLS +L+ LD+
Sbjct: 186 LKEINMDKCLGVTDIGLAKIAVGCSKLEKLSLKWCLEISDLGIDLLSKKCFDLNFLDVSY 245
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
L VT+ LRS+ L KLE + G + + L FL G L I
Sbjct: 246 LKVTNESLRSIASLLKLEVFIMVGCYLVDDAG--------LQFLE---KGCPLLKAIDVS 294
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL---------LSFL 171
C +S + S++ G+E G IN + L LS +
Sbjct: 295 RCNCVSPSGLLSVISGHE-----------GLEQINAGHCLSELSAPLTNGLKNLKHLSVI 343
Query: 172 DVSNSSLSRFCFL---TQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF-S 226
+ +S F + K+L L LS IG ++ ++ VG NL L+L+ RF +
Sbjct: 344 RIDGVRVSDFILQIIGSNCKSLVELGLSKC-IGVTNMGIMQVVGCCNLTTLDLTCCRFVT 402
Query: 227 SAGVGILAGHLPNLEILSLSG----TQIDDYAI-SYMSMMPSLKFIDISNT-DIK-GFIQ 279
A + +A PNL L L T+I Y I S M+ L D S DI ++
Sbjct: 403 DAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLS 462
Query: 280 QVGAETDLVLSLTA----------LQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHL 327
+ L L L N L L+L + ++ D L L+T +L L
Sbjct: 463 RCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRCVRIGDDGLAALTTGCNKLAML 522
Query: 328 SLRNAS-LTDVSLHQLSSLSKLTNLSIR 354
+L + +TD L +S+L +L++ +R
Sbjct: 523 NLAYCNRITDAGLKCISNLGELSDFELR 550
>gi|46447283|ref|YP_008648.1| hypothetical protein pc1649 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400924|emb|CAF24373.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 521
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ L+L+ C K+TDAG+ HL + L+ L L LT+ G+ SL L L+L
Sbjct: 339 LTNLQYLNLNGCKKLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLS 398
Query: 60 GLP-VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TGV 111
G + D L L L L+YL+L + +++ G A L L L+L+W G+
Sbjct: 399 GCKFIRDNGLAHLTPLVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGL 458
Query: 112 TKLPNISSLECLNLSNC 128
L ++ +L+ LNLS C
Sbjct: 459 AHLVHLVALQYLNLSGC 475
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+ L+ L+LS+C +TDAG+ HL+ + L+ L LS LT G+A L L L L+L
Sbjct: 414 LVALQYLNLSQCTFLTDAGLAHLVPLVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLS 473
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDL 82
G + +++ L L LT L++L+L
Sbjct: 474 GCIYLSEAGLAHLAPLTSLQHLNL 497
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 29 LEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWG-S 85
+E L SE D L L + +NL VL L +TD L L LT L+YL+L G
Sbjct: 292 IEGLNFSENAYLTDAHLLALKNCKNLKVLQLQSCHHLTDTGLACLPSLTNLQYLNLNGCK 351
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWT------GVTKLPNISSLECLNLSNCTIDSILEGNEN 139
++++ G A L L +L+L + G+ ++ +L+ LNLS C
Sbjct: 352 KLTDAGLAHLTPLVNLQYLDLGFCDKLTSKGLGHFKSLIALQHLNLSGCKF--------- 402
Query: 140 KAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS--S 197
I G + A Y+ S +FL +++ L+ L + AL+HLDLS +
Sbjct: 403 ------IRDNGLAHLTPLVALQYLNLSQCTFL--TDAGLAH---LVPLVALKHLDLSWCN 451
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRF-SSAGVGILA 234
S+ +V V L+ LNLS + S AG+ LA
Sbjct: 452 SLTNAGLAHLVHLVA--LQYLNLSGCIYLSEAGLAHLA 487
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKL------WLSETGLTADGIALLSSLQNLS 54
+ LK LDLS C +T+AG+ HL+ + L+ L +LSE GL +A L+SLQ+L+
Sbjct: 439 LVALKHLDLSWCNSLTNAGLAHLVHLVALQYLNLSGCIYLSEAGLA--HLAPLTSLQHLN 496
Query: 55 VLD 57
+ D
Sbjct: 497 LED 499
>gi|403257103|ref|XP_003921176.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 707
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 168/384 (43%), Gaps = 72/384 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG----------------------- 91
TD L+ L + KL YLDL G +Q+S +G
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILHLTINDMPTLT 364
Query: 92 -AAVLKMFPRLSFL-NLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 148
V + + S + ++ +TG P+IS LS C + I EGN+ +I+
Sbjct: 365 DNCVKALVEKCSHITSMVFTGA---PHISDCTFKALSTCKLRKIRFEGNK------RITD 415
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEM 207
A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 416 ASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQ 471
Query: 208 V--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPS 263
+R LNLSN + S V L+ PNL LSL + + I+Y+ + S
Sbjct: 472 FLDGPASIRIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 531
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFK 322
L ID+S TDI + ++ L+ LERL++ +Q+SD + L+ +
Sbjct: 532 LVSIDLSGTDISN---EAFCKSSLI-----------LERLDVSYCSQLSDMIIKALAIYC 577
Query: 323 -ELIHLSLRNA-SLTDVSLHQLSS 344
L LS+ +TD ++ LS+
Sbjct: 578 INLTSLSIAGCPKITDSAMEMLSA 601
>gi|343423900|emb|CCD18013.1| leucine-rich repeat protein [Trypanosoma vivax Y486]
Length = 648
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 180/384 (46%), Gaps = 74/384 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLT-ADGIALLSSLQNLSVLDLGGL 61
L+ L LS C +TD + L +S+L L LS TG+T +++ SSL+ L + G
Sbjct: 22 LRMLYLSHCTGITD--VSPLSKLSSLRTLDLSHCTGITDVSPLSVFSSLEKLDLSHCTG- 78
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPNI 117
+TD+ L L+ L LDL + +LK F L L+++ T V+ L +
Sbjct: 79 -ITDV--SPLSKLSSLRTLDLSHCTGITNVSPLLK-FSSLRMLDISHCTGITNVSPLSEL 134
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSFL 171
SSL L+LS+CT G + +PL K S L+ T I + L + L L
Sbjct: 135 SSLRTLDLSHCT------GITDVSPLLKFSSLHTLDLSHCTGITDVSPLLMFSS--LRML 186
Query: 172 DVSNSS-LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG----------ANLRNLNL 220
D+S+ + ++ L+++ +L ++ + C G ++LR L++
Sbjct: 187 DISHCTGITNVSPLSKLSSLR------------TLYFLYCTGITNVSPLSELSSLRTLDI 234
Query: 221 SNTRFSSAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDI 274
S+ G+ ++ L +L +L LS D +S +S + +L+ +D+S+ TD+
Sbjct: 235 SHC----TGITDVSPLSELSSLRMLDLSHCT-DISNVSRLSKIIALQKLDLSHCTGVTDV 289
Query: 275 KGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIH 326
+ +G E L LS + L L+ L LNL T ++D + PLS F L
Sbjct: 290 SPLSKMIGLE-KLYLSHCTGITDVPPLSELSSLRMLNLSHCTGITDVS--PLSEFSSLHT 346
Query: 327 LSLRNAS-LTDVS-LHQLSSLSKL 348
L L + + +TDVS L +LSSL L
Sbjct: 347 LDLSHCTGITDVSPLSELSSLRTL 370
>gi|167523190|ref|XP_001745932.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775733|gb|EDQ89356.1| predicted protein [Monosiga brevicollis MX1]
Length = 2039
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 161/374 (43%), Gaps = 45/374 (12%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+STL L LS + A ++L L L L P+T L + L L+ LDL S
Sbjct: 403 LSTLTTLDLSNNSIGALTAHTFATLTALRTLRLRNNPITSLAGSAFVELLNLQTLDLEDS 462
Query: 86 QVSNRGAAVLKMFPRLSFLNL------------AWTGVTKLP------------------ 115
++ A RL+ L L A+ G+ +LP
Sbjct: 463 SLTTLPAQAFAGLSRLTSLALKSRAKIANMAVNAFVGLDRLPELDLSNQAIQEIDIGMFS 522
Query: 116 NISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
++SL L+LSN +++I N L+ ++ AG F N A + + L+ L++S
Sbjct: 523 GLTSLTKLDLSNNRLNTIQSTAFNPLENLSALNFAGNPF-NGVAASAFRGLTQLTALNLS 581
Query: 175 NSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
+ ++S T + + LDLS + + A + A L L+LSN R ++
Sbjct: 582 HCNVSTLIGGTFETLSRVTSLDLSGIKLRTLPSQAFAGLSA-LPELDLSNMRITTVAGNA 640
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
AG L L L L G I S + +P+LK +++S+ + + ++L
Sbjct: 641 FAG-LDALTTLKLLGNPITTIESSAFANLPALKALNLSHLGLSVL------PANTFVNLP 693
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
ALQNL L L S+ F + LS++ LT ++ H S L+ LT+L+
Sbjct: 694 ALQNLT-LTGNQLATLGASNQPAFVACPRIRSLDLSMQK--LTAITAHAFSGLTGLTSLN 750
Query: 353 IRDAVLTNSGLGSF 366
+R+ ++T+ G+F
Sbjct: 751 LRNNLITSLATGAF 764
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 179/425 (42%), Gaps = 88/425 (20%)
Query: 1 MTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
M L LDLS + + + +A + HL +++L+ T L A L L L+ LDL
Sbjct: 1536 MVALTTLDLSDTQLLALGNASVAHLPKLTSLKL----PTTLRQLASAALLDLPQLATLDL 1591
Query: 59 GGLPVTDLVLRSLQVLTKLEYL-----------------------DLWGSQVSNRGAAVL 95
V L +L L KL+ L DL G+Q++ A VL
Sbjct: 1592 SATQVQQLASGALSNLAKLDSLIVSPSLETLVPGCFTNMTGVTSLDLAGTQLAQLEAQVL 1651
Query: 96 KMFPRLSFLNLAWTGVTKLPNIS-----SLECLNLSNCTIDSILEGNENKAPLAKISLAG 150
P L +NL+ + V L ++ SL ++LSN I++ N ++ P +K
Sbjct: 1652 TGLPALETINLSVSAVRTLGPLAFAGPTSLSAVDLSNTMIEAWTTNNASQGPFSK----S 1707
Query: 151 TTFINEREAFLYIET---------SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 201
T ++ A + ++T S LS +D+S + + T + AL LS+
Sbjct: 1708 TAIVSLSSAGMVLKTLTPHGFDGLSHLSAMDLSAADI------TSIPALAFAGLSNVTAL 1761
Query: 202 DDSVEMVACVGA-------NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY- 253
+V + +G+ +L L+LSN ++ AG L L+ L++SG +
Sbjct: 1762 LLNVSRLTQLGSQGFTGLNHLLTLDLSNAPLATLPASGFAG-LTTLQTLNMSGAHVTALP 1820
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
A ++ + LK +D+S + L A + ++ L+RL L Q++
Sbjct: 1821 ADAFQGLNVQLKDLDLSGNKLA------------RLEAAAFKAVSGLQRLYLSGNQITQV 1868
Query: 314 TLFPLSTFKELIHLSLRNASLT---DVS-LHQLSSLSKLT--NLSI--------RDAVLT 359
L LIHL L + +L +VS L L+SL +L N+ I RDA +
Sbjct: 1869 DAQALGGLSTLIHLDLSDNALAAPLNVSVLAPLTSLQQLCLGNVKINCCGFEKLRDAGVI 1928
Query: 360 NSGLG 364
++G G
Sbjct: 1929 DAGCG 1933
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 50/332 (15%)
Query: 1 MTCLKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQ--NLSVL 56
++ L ELDLS R V L +++TL+ L T + + A L +L+ NLS L
Sbjct: 620 LSALPELDLSNMRITTVAGNAFAGLDALTTLKLLGNPITTIESSAFANLPALKALNLSHL 679
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF---PRLSFLNLAWTGVTK 113
L LP V L L+ L L G+Q++ GA+ F PR+ L+L+ +T
Sbjct: 680 GLSVLPANTFV-----NLPALQNLTLTGNQLATLGASNQPAFVACPRIRSLDLSMQKLTA 734
Query: 114 L-----PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 168
+ ++ L LNL N I S+ G A +L+ N ++ L+
Sbjct: 735 ITAHAFSGLTGLTSLNLRNNLITSLATG-------AFANLSAELASNAPSTLAHVLYLLV 787
Query: 169 SF----------LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
F LD+ N+ L+ + AL+ L L++ I + + + + A L+
Sbjct: 788 CFAALIKCQVTQLDIRNNKLTALASSSFDGLSALQSLSLANMAITKLPLGVFSGLNA-LQ 846
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L L T G +LA L L L L+ +Q+ +++ P L +D+S+T ++
Sbjct: 847 VLRLDGTGVQEIGAMVLA-PLSQLSTLWLNSSQLTTITTKWLASKPHLMQVDLSHTQLQK 905
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+ A ++L LE +NL+ T
Sbjct: 906 ------------VPTFAFEDLPALEAINLDNT 925
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 30/367 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+ +LD+ R K+T +S L+ L L+ +T + + S L L VL L G V
Sbjct: 797 VTQLDI-RNNKLTALASSSFDGLSALQSLSLANMAITKLPLGVFSGLNALQVLRLDGTGV 855
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NIS 118
++ L L++L L L SQ++ L P L ++L+ T + K+P ++
Sbjct: 856 QEIGAMVLAPLSQLSTLWLNSSQLTTITTKWLASKPHLMQVDLSHTQLQKVPTFAFEDLP 915
Query: 119 SLECLNLSNCTIDSILEGN--ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+LE +NL N + +EG+ N L + ++G + + + ++ L+ L +S+
Sbjct: 916 ALEAINLDNTAALTTVEGSAFANLPRLQSLVVSGGS-LETWASNALVDCPSLTTLTISHQ 974
Query: 177 SLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGIL 233
L+ L+ LDLS + I D + A VG NL L++ + G
Sbjct: 975 RLAALPTEAFAGASGLQALDLSYNNISD--IGKNAFVGLNNLTQLHIEGNPIAVLEEGAF 1032
Query: 234 AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLT 292
AG L Q D A + +++P+ F ++S + QV L L
Sbjct: 1033 AG---------LRRVQALDLAATAFTILPTNVFANMSA------LGQVTLPASLATLQSN 1077
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 352
AL +L L ++ T++S + L L ++L LT V+ + LS L +L
Sbjct: 1078 ALAHLPMLASVDFSHTKLSALPEYSLVDLPRLTTVALPPNRLTAVAANALSDCPGLLSLD 1137
Query: 353 IRDAVLT 359
+ + LT
Sbjct: 1138 LSNQQLT 1144
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 153/381 (40%), Gaps = 37/381 (9%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L+LS+ V+ A + +++L +L LS +GL L +++ LDL G +
Sbjct: 1467 LTALNLSQQALVSVAPAP-FVGLASLTQLNLSHSGLIHLPDQAFEGLSHVTSLDLSGNAL 1525
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPNISS 119
+ + Q + L LDL +Q+ G A + P+L+ L L T L ++
Sbjct: 1526 QWVGQAAFQGMVALTTLDLSDTQLLALGNASVAHLPKLTSLKLPTTLRQLASAALLDLPQ 1585
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
L L+LS + + G + LAK+ L + SL +L
Sbjct: 1586 LATLDLSATQVQQLASGALSN--LAKLD------------SLIVSPSL--------ETLV 1623
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
CF T M + LDL+ + + +++ + A L +NLS + + G AG +
Sbjct: 1624 PGCF-TNMTGVTSLDLAGTQLAQLEAQVLTGLPA-LETINLSVSAVRTLGPLAFAGPT-S 1680
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L + LS T I+ + + S P K I + G + + L+ L+H
Sbjct: 1681 LSAVDLSNTMIEAWTTNNASQGPFSKSTAIVSLSSAGMVLK-------TLTPHGFDGLSH 1733
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
L ++L ++ + + L L + LT + + L+ L L + +A L
Sbjct: 1734 LSAMDLSAADITSIPALAFAGLSNVTALLLNVSRLTQLGSQGFTGLNHLLTLDLSNAPLA 1793
Query: 360 NSGLGSFKPPRSLKLLDLHGG 380
F +L+ L++ G
Sbjct: 1794 TLPASGFAGLTTLQTLNMSGA 1814
>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
Length = 1279
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 69/386 (17%)
Query: 26 ISTLEKLWLSETGLT--ADGIALLSSLQNLSVLD--LGGLPVTDLVLRSLQVLTKLEYLD 81
+S+L+ L +S T L D I LSSLQ+L V D + LP S+ L+ L++LD
Sbjct: 265 LSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLP------DSIGQLSNLQHLD 318
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN----ISSLECLNLSNCTIDSILEGN 137
+ + ++ ++ ++ L L ++ + LP +SSL+ LNLS + ++ E
Sbjct: 319 VSDTSLNTLPDSIGQL-SNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEAL 377
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLS 196
+ L ++L+GT EA + + L L++S + L+ + Q+ +L+ L+LS
Sbjct: 378 CQLSSLQDLNLSGTGLTTLPEAICQLNS--LQDLNLSGTGLTTLPEAICQLNSLQDLNLS 435
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSS----------------AGVGILA-----G 235
+ G ++ C +L++LNLS T ++ +G G+ G
Sbjct: 436 GT--GLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIG 493
Query: 236 HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVG----------AET 285
L NL L S T + + + +L+F++ISNT + +G ++T
Sbjct: 494 QLTNLNNLMASNTALTTLP-DTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDT 552
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV-----SLH 340
DLV ++ L LE LN+ T + T P + L +L + N S TD+ S+
Sbjct: 553 DLVTLPESIGQLTSLEILNVSNTGL---TSLP-ESIGRLTNLQILNVSNTDLTSLPESIG 608
Query: 341 QLSSLSKLTNLSIRDAVLTNSGLGSF 366
QL SL KL ++N+GL S
Sbjct: 609 QLKSLIKLN--------VSNTGLTSL 626
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 165/335 (49%), Gaps = 63/335 (18%)
Query: 29 LEKLWLSETGLTA--DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
L+ L++S T LT + I LS+L+ L + G + + D S+ + L+ L++ +
Sbjct: 107 LQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPD----SIGEMPNLQDLNVSSTD 162
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
++ A++ ++ RL L+++ TG+T LP+ S+ L++ L +
Sbjct: 163 LTTLPASIGQL-TRLQHLDVSSTGLTSLPD--SIGQLSM-----------------LKHL 202
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC-FLTQMKALEHLDLSSSMIG--DD 203
++GT ++ + L LDVS++SL+ + Q+ +L+HLD+S + + D
Sbjct: 203 DVSGTDLATLPDSIGQLTN--LKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPD 260
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
S+ + ++L++L++S TR I+ L +L+ L +S T I++ S + + +
Sbjct: 261 SIGQL----SSLQHLDVSGTRLQILPDSIV--QLSSLQHLDVSDTSINNLPDS-IGQLSN 313
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--FPLSTF 321
L+ +D+S+T + +G L NL HLE VSDA+L P + +
Sbjct: 314 LQHLDVSDTSLNTLPDSIG----------QLSNLQHLE--------VSDASLNTLPETIW 355
Query: 322 K--ELIHLSLRNASLTDV--SLHQLSSLSKLTNLS 352
+ L L+L LT + +L QLSSL L NLS
Sbjct: 356 RLSSLQDLNLSGTGLTTLPEALCQLSSLQDL-NLS 389
>gi|229160381|ref|ZP_04288379.1| Internalin [Bacillus cereus R309803]
gi|228623105|gb|EEK79933.1| Internalin [Bacillus cereus R309803]
Length = 747
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 43/217 (19%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFS 226
L L V+N+ + F T +K L+HL L ++ I V++ + NL +L+LSN + +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRANEI----VDVTPLIKMDNLDSLDLSNNKIT 294
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG---------- 276
+ + + N++ L LSG QI+D ++ ++ M L +++++N I
Sbjct: 295 NVAPLV---EMKNVKSLYLSGNQIED--VTALAKMEQLDYLNLANNKITNVAPLSALKNV 349
Query: 277 -FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLFP 317
++ G + DLVL+ L+ + +N L +L++ + Q+ D T
Sbjct: 350 TYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGIDQMNQLSKLSIGKNQIEDVT--S 407
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
L+ +L L L N L D++ LSSL L L +
Sbjct: 408 LAKMTQLTELDLPNNELKDIT--PLSSLVNLQKLDLE 442
>gi|423481309|ref|ZP_17457999.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
gi|401146069|gb|EJQ53589.1| hypothetical protein IEQ_01087 [Bacillus cereus BAG6X1-2]
Length = 761
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVTN-AKIKDPSFFT---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKTLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I+ + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--ITPLYTLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + LN L+ L + + ++ D T PLS +L L+L N L D++
Sbjct: 387 -----------DLSGIDQLNQLQELWIGKNEIKDVT--PLSKMTQLKVLNLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVTNAKIKDPSFFTNLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKTLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
+ L L ++D VLT
Sbjct: 368 TPLYTLPLKDLVLT 381
>gi|229029099|ref|ZP_04185198.1| Internalin [Bacillus cereus AH1271]
gi|228732379|gb|EEL83262.1| Internalin [Bacillus cereus AH1271]
Length = 772
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLVEMKNVKSLYLSGNQIED--VTALAKM-EQLGYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL +L L L N L D++
Sbjct: 393 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLVKMTQLTELDLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ + + N++ L LSG QI+D
Sbjct: 305 TNVAPLV---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLGYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 374 KPLYSLPLKDLVLT 387
>gi|421888174|ref|ZP_16319282.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
gi|378966463|emb|CCF96030.1| leucine-rich-repeat type III effector protein (GALA5) [Ralstonia
solanacearum K60-1]
Length = 468
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 141/375 (37%), Gaps = 57/375 (15%)
Query: 4 LKELDLSRCVK-VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
LKELDLSRC +T AG+ HL + L +L L+ + G L++ L+ LD+G
Sbjct: 76 LKELDLSRCRGGITAAGIAHLNRLP-LVRLNLNGNRIGLAGAQRLANHPTLTALDVGRCR 134
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLEC 122
+ R L +L L++ +++ G L L+ L+++ G + E
Sbjct: 135 IGPEEARELAASARLTTLNVSRNRIGGEGVRALADCKTLTSLDVSENG------LGDAEA 188
Query: 123 LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
L + L N N+ +DV + C
Sbjct: 189 QRLGASERLTTLNVNRNR------------------------------IDVPGARALAAC 218
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
K L LD+ + IGD+ V+ + A L LN+ + GV LA L
Sbjct: 219 -----KTLTSLDIGGNSIGDEGVDAL-VANAQLTTLNVERAGVGAHGVQALA-DCKTLTS 271
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L + I D + ++ SL + I + A + L
Sbjct: 272 LRIDSNNIGDEGANTLAASISLTTLHSEGNGIGLAGAKALAANTM------------LTT 319
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNL V DA L L+ LS+R L+D +L++ LT L I D + ++G
Sbjct: 320 LNLGHNSVGDAGAQALFANTTLVWLSVRRNGLSDAGAIRLAASRTLTTLDIGDNAIKDAG 379
Query: 363 LGSFKPPRSLKLLDL 377
+ R+L L++
Sbjct: 380 ARALAANRTLTTLNV 394
>gi|290995863|ref|XP_002680502.1| predicted protein [Naegleria gruberi]
gi|284094123|gb|EFC47758.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 152 TFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
T++++REA + E + L+ L+VSNS + + +M L L++ ++ IG + + V+
Sbjct: 135 TYVHDREAKIISEMTQLTSLNVSNSIRIKKSIAYFREMNNLTCLNIGNNGIGVECAKHVS 194
Query: 210 CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ L L++ G ++ L L L +S I + Y+S + L +DI
Sbjct: 195 EM-KQLTILHICGNGIKFEGAKFIS-ELQQLTKLDVSSNNIGEQGAKYISQLKQLTNLDI 252
Query: 270 SNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 329
+ ++GA+ + + L RLN+ ++ +S K+LI+L++
Sbjct: 253 -------YSNRIGAQ-----GAKHISEMKQLTRLNISYNDINVEGAKYISEMKQLINLNI 300
Query: 330 RNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
++ D +S +++LTNL I + ++N+G
Sbjct: 301 TKNNIGDEGARHISGMNQLTNLFIGNNNISNAGF 334
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 4 LKELDLSRCVKVTDAGM-----KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL 58
+E++ C+ + + G+ KH+ + L L + G+ +G +S LQ L+ LD+
Sbjct: 169 FREMNNLTCLNIGNNGIGVECAKHVSEMKQLTILHICGNGIKFEGAKFISELQQLTKLDV 228
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
+ + + + L +L LD++ +++ +GA + +L+ LN+++ +
Sbjct: 229 SSNNIGEQGAKYISQLKQLTNLDIYSNRIGAQGAKHISEMKQLTRLNISYNDIN 282
>gi|71650734|ref|XP_814059.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878999|gb|EAN92208.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 934
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 351 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 410
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
+ + A L L +L L + + D +++ + P L +D +Q G T L
Sbjct: 411 SLQWLRA--LNQLRVLDLGYSSVTDDSLTALRFCPELAKLD---------LQWCGRITSL 459
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 346
+ AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 460 KCLVGAL--CDSLRELNLTETSVTDEGLVPLKYFAALEWISLEGCGAVSDVNV--LCNLT 515
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+L + + +TN G+ S ++L+++ + + LT+ + L
Sbjct: 516 RLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDASFL 558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 69/376 (18%)
Query: 25 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 83
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L LDL
Sbjct: 369 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLDLG 427
Query: 84 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN------ 137
S V++ L+ P L+ L+L W G I+SL+CL + C DS+ E N
Sbjct: 428 YSSVTDDSLTALRFCPELAKLDLQWCG-----RITSLKCLVGALC--DSLRELNLTETSV 480
Query: 138 --ENKAPLAK------ISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS---------- 179
E PL ISL G +++ + + L +DV + ++
Sbjct: 481 TDEGLVPLKYFAALEWISLEGCGAVSDVNVLCNL--TRLREVDVGRTRVTNRGVVSLSQC 538
Query: 180 --------RFC-------FLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNT 223
R C FL ++ LE +DLS + ++ + + GA +LR L L +
Sbjct: 539 QALRVMRMRQCYRLTDASFLGALQQLEEVDLSDCPVTNEGIAEL--FGARSLRKLRLQSC 596
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
S V L G L +L +L L T +D+ ++ P L + I ++ + +QQ
Sbjct: 597 HAVS-DVNFLGG-LEHLMLLDLHHTTVDEEGSVGLAQCPQLMTL-IMHSVLVHSLQQWN- 652
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR---NASLTDVSLH 340
TAL L L+RL+L T+V+ L + L LSLR N + D +
Sbjct: 653 --------TAL-FLPRLKRLDLSTTKVTSDALSFVRMCPILETLSLRGCKNITHLDFLIL 703
Query: 341 QLSSLSKLTNLSIRDA 356
Q SS + + + RDA
Sbjct: 704 QPSSGAGVCAIVPRDA 719
>gi|406830031|ref|ZP_11089625.1| leucine-rich repeat-containing protein [Schlesneria paludicola DSM
18645]
Length = 306
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ DA M + +++ LE L L T +T G+ +SSL++L L+L G VTD L SL L
Sbjct: 85 IGDAHMGVIGALTQLESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGL 144
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV--TKLPNISSLECLNL----SNC 128
T+L L+L +Q++ G L RL L L T V +P +S LE L +
Sbjct: 145 TELTSLNLNDTQINGLGLVYLSKLNRLEALYLQNTVVDFESIPPLSGLESLKILHLAGTK 204
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINE 156
T I+ L ++ L GT+ +E
Sbjct: 205 TGGGIVRAITGLPSLERLYLNGTSIKDE 232
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 134/315 (42%), Gaps = 60/315 (19%)
Query: 39 LTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
L ADG A S + V+ L +TD + L L L L S + + V+
Sbjct: 37 LEADGKASGSLGADGHVVSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGAL 96
Query: 99 PRLSFLNLAWTGVTK--LPNISSLEC---LNLSNCTIDSILEGNENKAPLAKISLAGTTF 153
+L L L T VT L +ISSLE LNL+ C S+ +G SLAG T
Sbjct: 97 TQLESLALDHTQVTDAGLQSISSLEHLRELNLAGC---SVTDGGLG-------SLAGLT- 145
Query: 154 INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA 213
E + L+ D + L +L+++ LE L L ++++ +S+ ++ +
Sbjct: 146 ----------ELTSLNLNDTQINGLG-LVYLSKLNRLEALYLQNTVVDFESIPPLSGL-E 193
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
+L+ L+L+ T+ V + G LP+LE L L+GT I D I P+L +
Sbjct: 194 SLKILHLAGTKTGGGIVRAITG-LPSLERLYLNGTSIKDEDI------PALAAV------ 240
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
QN H + L +E+T +SDA L P+ +L +L +
Sbjct: 241 -------------------LAQNCPHFKGLFVEKTALSDAALEPMHPLADLKEFTLIHVH 281
Query: 334 LTDVSLHQLSSLSKL 348
T V+ + L KL
Sbjct: 282 GTKVTKDGVVRLRKL 296
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI-KGFIQQVGAETDLVLSLTALQNLNH 299
++SLS + D A ++ P+L + ++++ I + +GA L
Sbjct: 52 HVVSLSSHSMTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGA-------------LTQ 98
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
LE L L+ TQV+DA L +S+ + L L+L S+TD L L+ L++LT+L++ D +
Sbjct: 99 LESLALDHTQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQIN 158
Query: 360 NSGL 363
GL
Sbjct: 159 GLGL 162
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+TD K L + L L L+++ + + ++ +L L L L VTD L+S+ L
Sbjct: 61 MTDDAAKQLTAFPALTTLALTDSPIGDAHMGVIGALTQLESLALDHTQVTDAGLQSISSL 120
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCT 129
L L+L G V++ G L L+ LNL T G+ L ++ LE L L N
Sbjct: 121 EHLRELNLAGCSVTDGGLGSLAGLTELTSLNLNDTQINGLGLVYLSKLNRLEALYLQNTV 180
Query: 130 ID 131
+D
Sbjct: 181 VD 182
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L+ L L +VTDAG++ + S+ L +L L+ +T G+ L+ L L+ L+L
Sbjct: 96 LTQLESLALDH-TQVTDAGLQSISSLEHLRELNLAGCSVTDGGLGSLAGLTELTSLNLND 154
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTK-LP 115
+ L L L L +LE L L + V L L L+LA T G+ + +
Sbjct: 155 TQINGLGLVYLSKLNRLEALYLQNTVVDFESIPPLSGLESLKILHLAGTKTGGGIVRAIT 214
Query: 116 NISSLECLNLSNCTI 130
+ SLE L L+ +I
Sbjct: 215 GLPSLERLYLNGTSI 229
>gi|290994522|ref|XP_002679881.1| leucine rich repeat protein [Naegleria gruberi]
gi|284093499|gb|EFC47137.1| leucine rich repeat protein [Naegleria gruberi]
Length = 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 46 LLSSLQNLSVLDLGGLP-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
++ ++ L+ LD+ + D + + L +L +L++ + + GA L +L+ L
Sbjct: 94 IIGKMKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQNNIGPEGAKYLSKLDQLTNL 153
Query: 105 NL-----AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
+ G + ++ L LN+SN I G E +++IS
Sbjct: 154 KINSNEIGPEGAKSISDMKQLTTLNISNNMI-----GMEGAKSISEIS------------ 196
Query: 160 FLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 217
S L+ LD+S++ +S F+++M L LD + + IGD + ++ + NLR
Sbjct: 197 ------SQLTILDISSNQISNEGLKFISEMSQLTSLDTNGNNIGDKGAKYLSEL-KNLRV 249
Query: 218 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 272
L++S G +++ LP L L++S +I + Y+S M L ++ISN
Sbjct: 250 LDISKNFVYDNGADLIS-KLPQLTNLNISFNEIGNQGAIYLSKMEKLTILNISNN 303
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 46/272 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+ C + D G K++ +++ L L +S+ + +G LS L L+ L +
Sbjct: 98 MKQLTFLDIRNCSMIDDKGAKYVSALNQLTFLNISQNNIGPEGAKYLSKLDQLTNLKINS 157
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ +S+ + +L L++ + + GA K +S S L
Sbjct: 158 NEIGPEGAKSISDMKQLTTLNISNNMIGMEGA---KSISEIS---------------SQL 199
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L++S+ +IS G FI+ E S L+ LD + +++
Sbjct: 200 TILDISS----------------NQISNEGLKFIS--------EMSQLTSLDTNGNNIGD 235
Query: 181 --FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
+L+++K L LD+S + + D+ ++++ + L NLN+S + G I +
Sbjct: 236 KGAKYLSELKNLRVLDISKNFVYDNGADLISKL-PQLTNLNISFNEIGNQG-AIYLSKME 293
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
L IL++S I Y+ M L ++I+
Sbjct: 294 KLTILNISNNLIGPAGAKYLGEMQQLTKLNIN 325
>gi|423643526|ref|ZP_17619144.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
gi|401274106|gb|EJR80084.1| hypothetical protein IK9_03471 [Bacillus cereus VD166]
Length = 760
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKALY-----SLPLTDLVLTRNK--- 384
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS L L L N L D++
Sbjct: 385 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTRLKQLHLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 368 KALYSLPLTDLVLTRNKVKDLSGIEQMKQLE 398
>gi|290980745|ref|XP_002673092.1| predicted protein [Naegleria gruberi]
gi|284086673|gb|EFC40348.1| predicted protein [Naegleria gruberi]
Length = 498
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 157/385 (40%), Gaps = 68/385 (17%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L ++ + G K++ + L L + +T DG +S ++ L+VL++ G
Sbjct: 176 MKQLKQLHIANN-NIGPEGAKYISGLEQLTFLNIRANEITVDGAKFISEMKQLTVLNIIG 234
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT----GVTKLPN 116
+ D + + + +L LD+ + + GA + ++ LN+ + GV
Sbjct: 235 NNICDEGAKFISGMKQLTNLDISVNNIGENGAKYVSEMMNITKLNIGFNSINDGVKCFGE 294
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+ L LN+++ I S G E + +++ L I +L+S + +
Sbjct: 295 MKQLTDLNVNSRCIGS--NGVEYISSFNQLT------------HLSIAKNLISLYEAMH- 339
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
++QMK L LD+S + IGD+ V+ ++
Sbjct: 340 -------ISQMKNLIKLDISDNDIGDNGVQSIS--------------------------E 366
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L L++S I I Y+ M +L ++ ++ +I GA+ +
Sbjct: 367 MNQLTELNVSSIDITPIGIQYICKMDNLTYLISAHNNI-------GAK-----GAKQISE 414
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+ HL +L++ V D +S ++L L + + D + L + +LT L+ D
Sbjct: 415 MKHLAQLSIYHNAVGDEGAKFISEMEQLTFLDIGYNEIGDEGVKFLCGMKQLTRLNTVDN 474
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGW 381
+++ G K R + L D G +
Sbjct: 475 NISDEGE---KYIREMNLADHVGIY 496
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 165/399 (41%), Gaps = 43/399 (10%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L++ + +G K++ S+ L L+++ L SL++L+ L + G
Sbjct: 103 MKELKKLNIEYNSNIDPSGFKYICSLEQLTDLYMTFCYFRLPIAKHLPSLKSLTYLLITG 162
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNIS 118
+ + + + +L+ L + + + GA + +L+FLN+ +T IS
Sbjct: 163 NYIGVEGAKYIGEMKQLKQLHIANNNIGPEGAKYISGLEQLTFLNIRANEITVDGAKFIS 222
Query: 119 SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 178
++ L + N ++I + G FI+ + ++ S V+N
Sbjct: 223 EMKQLTVLNIIGNNICD-------------EGAKFISGMKQLTNLDIS------VNNIGE 263
Query: 179 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANLRNLNLSNTRFSSAGVGILAGH 236
+ ++++M + L++ + I D V C G L +LN+++ S GV ++
Sbjct: 264 NGAKYVSEMMNITKLNIGFNSINDG----VKCFGEMKQLTDLNVNSRCIGSNGVEYISS- 318
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L LS++ I Y ++S M +L +DIS+ DI + ++
Sbjct: 319 FNQLTHLSIAKNLISLYEAMHISQMKNLIKLDISDNDIGDN------------GVQSISE 366
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
+N L LN+ ++ + + L +L + ++ Q+S + L LSI
Sbjct: 367 MNQLTELNVSSIDITPIGIQYICKMDNLTYLISAHNNIGAKGAKQISEMKHLAQLSIYHN 426
Query: 357 VLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQF-CKM 394
+ + G L LD+ G+ D ++F C M
Sbjct: 427 AVGDEGAKFISEMEQLTFLDI--GYNEIGDEGVKFLCGM 463
>gi|52144007|ref|YP_082821.1| internalin [Bacillus cereus E33L]
gi|51977476|gb|AAU19026.1| internalin [Bacillus cereus E33L]
Length = 772
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V ++A + L L
Sbjct: 285 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTVLAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 342 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ ++ + LE L + + ++ D T PLS +L L L N LTD++
Sbjct: 393 -----------DLSGIEQMKQLEELWIGKNEIKDIT--PLSKMTQLKELHLPNNELTDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
>gi|290996081|ref|XP_002680611.1| predicted protein [Naegleria gruberi]
gi|284094232|gb|EFC47867.1| predicted protein [Naegleria gruberi]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 145/362 (40%), Gaps = 88/362 (24%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S ++ D G K++ + L L +S+ + +G +S ++ L+ L++
Sbjct: 125 MKQLTSLDISEN-QIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLNISY 183
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
++D + + + +L L ++ + + + GA ++ +L+ LN+++
Sbjct: 184 NAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNS---------- 233
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLS 179
IS G FI+E + TSL + F ++S
Sbjct: 234 -------------------------ISDEGAKFISEMKQL----TSLDIVFNEISGEGAK 264
Query: 180 RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPN 239
F+++MK L LD+S + IGD+ V+ ++ +
Sbjct: 265 ---FISEMKQLTSLDISDNEIGDEGVKYLS--------------------------EMKQ 295
Query: 240 LEILSLSGT------QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA 293
L L++SG QI + ++S M L +DIS I GA+
Sbjct: 296 LTSLTISGNEITYCNQISEEGAKFISEMKQLTSLDIS----YNLISDEGAK--------Y 343
Query: 294 LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ + L LN+ +S +S K+L L + + + D +S + +LT+L+I
Sbjct: 344 ISEMKQLTSLNISYNSISGEGAKFISEMKQLTSLDIVSNRIGDEGAKYISEMKQLTSLNI 403
Query: 354 RD 355
D
Sbjct: 404 SD 405
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 21 KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYL 80
K + + L L +SE + +G +S ++ L+ LD+ + + D + + + +L L
Sbjct: 120 KFITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSL 179
Query: 81 DLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILE 135
++ + +S+ GA + +L L++ G + + L LN+S +I E
Sbjct: 180 NISYNAISDEGAKFISEMKQLMSLHIYKNLIGDEGAKYIREMKQLTSLNISYNSISD--E 237
Query: 136 GNENKAPLAK----------ISLAGTTFINE---------------REAFLYI-ETSLLS 169
G + + + + IS G FI+E E Y+ E L+
Sbjct: 238 GAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEGVKYLSEMKQLT 297
Query: 170 FLDVSNSSLSRFC---------FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
L +S + ++ +C F+++MK L LD+S ++I D+ + ++ + L +LN+
Sbjct: 298 SLTISGNEIT-YCNQISEEGAKFISEMKQLTSLDISYNLISDEGAKYISEM-KQLTSLNI 355
Query: 221 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
S S G ++ + L L + +I D Y+S M L ++IS+
Sbjct: 356 SYNSISGEGAKFIS-EMKQLTSLDIVSNRIGDEGAKYISEMKQLTSLNISD 405
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F+T+MK L LD+S + IGD+ + ++ + L +L++S+ G ++ + L
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEM-RQLTSLDISDIEIGDEGAKYIS-EMKQLTS 178
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L++S I D ++S M L + I K I GA+ ++ + L
Sbjct: 179 LNISYNAISDEGAKFISEMKQLMSLHI----YKNLIGDEGAK--------YIREMKQLTS 226
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LN+ +SD +S K+L L + ++ +S + +LT+L I D + + G
Sbjct: 227 LNISYNSISDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEMKQLTSLDISDNEIGDEG 286
Query: 363 LGSFKPPRSLKLLDLHG 379
+ + L L + G
Sbjct: 287 VKYLSEMKQLTSLTISG 303
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G K++ + L L +S ++ +G +S ++ L+ LD+ ++ + + +
Sbjct: 210 IGDEGAKYIREMKQLTSLNISYNSISDEGAKFISEMKQLTSLDIVFNEISGEGAKFISEM 269
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+L LD+ +++ + G L +L+ L ++ +T IS
Sbjct: 270 KQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEITYCNQISE--------------- 314
Query: 135 EGNENKAPLAKISLAGTTF--INEREAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKAL 190
EG + + + +++ ++ I++ A E L+ L++S +S+S F+++MK L
Sbjct: 315 EGAKFISEMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKFISEMKQL 374
Query: 191 EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LD+ S+ IGD+ + ++ + L +LN+S+ +F+S
Sbjct: 375 TSLDIVSNRIGDEGAKYISEM-KQLTSLNISDNQFNS 410
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 137/332 (41%), Gaps = 49/332 (14%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
++ ++ L+ LD+ + D + + + +L LD+ ++ + GA + +L+ LN
Sbjct: 121 FITEMKQLTSLDISENQIGDEGAKYISEMRQLTSLDISDIEIGDEGAKYISEMKQLTSLN 180
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
+++ IS G FI+E + +
Sbjct: 181 ISYNA-----------------------------------ISDEGAKFISEMKQLM---- 201
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
SL + ++ +++ + +MK L L++S + I D+ + ++ + L +L++
Sbjct: 202 SLHIYKNLIGDEGAKY--IREMKQLTSLNISYNSISDEGAKFISEM-KQLTSLDIVFNEI 258
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
S G ++ + L L +S +I D + Y+S M L + IS +I + Q+ E
Sbjct: 259 SGEGAKFIS-EMKQLTSLDISDNEIGDEGVKYLSEMKQLTSLTISGNEIT-YCNQISEEG 316
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+S + L L++ +SD +S K+L L++ S++ +S +
Sbjct: 317 AKFIS-----EMKQLTSLDISYNLISDEGAKYISEMKQLTSLNISYNSISGEGAKFISEM 371
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+LT+L I + + G + L L++
Sbjct: 372 KQLTSLDIVSNRIGDEGAKYISEMKQLTSLNI 403
>gi|428171120|gb|EKX40039.1| hypothetical protein GUITHDRAFT_50256, partial [Guillardia theta
CCMP2712]
Length = 302
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 24/310 (7%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
L G+T + S LQ L L LG +T L L L+YLDL G+++++
Sbjct: 3 LYSQGITNMTKGVFSGLQGLQSLSLGANELTSLPEGVFSGLEGLQYLDLSGNELTSLPEG 62
Query: 94 VLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEG-NENKAPLAKIS 147
V L L+L +T LP +S L+ LNL N + S+ EG L +S
Sbjct: 63 VFSGLSGLQGLSLG-NVLTSLPEGVFSELSGLQWLNLWNTQLTSLPEGVFSGLQGLQGLS 121
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSV 205
L G + E ++ S L +L++ ++ L+ + + L+ L L + +
Sbjct: 122 LVGNVLTSLPEG-VFSGLSGLQWLELWDTQLTSLPVGVFSGLSGLQGLYLGGNEL-TSLP 179
Query: 206 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK 265
E V + LR+L LS+ + +S G+ +G L L+ L LS TQ+ S + LK
Sbjct: 180 EGVFSGLSGLRSLELSHNQLTSLPEGVFSG-LSGLQGLYLSHTQLTSLPEGVFSGLSGLK 238
Query: 266 FIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
++ +S+ + + V L+ L+ L+L+ Q++ S +LI
Sbjct: 239 YLYLSHNQLTSLPEGV------------FSGLSGLQYLDLQYNQLTCIPSQAFSDSNDLI 286
Query: 326 HLSLRNASLT 335
++ L+N LT
Sbjct: 287 NVWLQNNHLT 296
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDALKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|356529873|ref|XP_003533511.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
TDR-like [Glycine max]
Length = 1187
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 44/281 (15%)
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIET 165
+W +T P S + L+LS+ + + + + L ++L+G F + ++ E
Sbjct: 73 SWRAITCHPKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFTGSFQYAIF-EL 131
Query: 166 SLLSFLDVSNSSL-SRFC-FLTQMKALEHLD-LSSSMIGDDSVEMVACVGANLRNLNLSN 222
+ L LD+S++S S F ++++K L H + S+S G E+ + LNL
Sbjct: 132 TELRTLDISHNSFNSTFPPGISKLKFLRHFNAYSNSFTGPLPQELTTL--RFIEQLNLGG 189
Query: 223 TRFSSAGVGILAGHLPNLEILSLSG--------------TQIDDYAISY----------M 258
+ FS G+ G P L+ L L+G +++ I Y +
Sbjct: 190 SYFSD-GIPPSYGTFPRLKFLDLAGNAFEGPLPPQLGHLAELEHLEIGYNNFSGTLPSEL 248
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
++P+LK++DIS+T+I G + + L NL LE L L + +++ L
Sbjct: 249 GLLPNLKYLDISSTNISGNV------------IPELGNLTKLETLLLFKNRLTGEIPSTL 296
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 359
K L L L + LT Q++ L++LT L++ + LT
Sbjct: 297 GKLKSLKGLDLSDNELTGPIPTQVTMLTELTMLNLMNNNLT 337
>gi|254465977|ref|ZP_05079388.1| hypothetical protein RBY4I_2585 [Rhodobacterales bacterium Y4I]
gi|206686885|gb|EDZ47367.1| hypothetical protein RBY4I_2585 [Rhodobacterales bacterium Y4I]
Length = 350
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 128/301 (42%), Gaps = 67/301 (22%)
Query: 1 MTCLKELDLSRCVKV-TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
T LKEL L ++ + L ++ LE+L L +TA +A L+ L L L L
Sbjct: 7 FTHLKELTLMADLRFDAPVDLSPLAALPGLERLAL--VSITAPDLAPLTRLPGLKRLSLD 64
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS 118
+ D L +T LE+L +WG +V++ A + RL LN+A +GVT L +
Sbjct: 65 SVQAPDFT--PLAGMTGLEHLSVWGIKEVTDLSFA--RGLTRLQSLNIADSGVTDLSPLE 120
Query: 119 SLECLN------------------------LSNCTIDSI--------------------- 133
L+ L +SNC ++S+
Sbjct: 121 GLQDLEVFLAFNTQVSDLSPLAAANLRVAWISNCPVESVAALAASDRLEMLRADGTRLQS 180
Query: 134 LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
LEG +NK L + L+ T E + + L+ L + + +S LT + AL L
Sbjct: 181 LEGLQNKPALQTLILSDTPVA---ELAPIADAASLTELALDGTKVSDIAPLTGLSALRKL 237
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQID 251
L + + S+E +A G NLR L+L+NT V L G + NL LS+SGT I
Sbjct: 238 TLKGTAV--TSLEPLA--GKNLRELSLTNT-----AVAELDGVQDMENLWELSISGTGIR 288
Query: 252 D 252
D
Sbjct: 289 D 289
>gi|104647031|gb|ABF74139.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + + P+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEEFPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLGX---LVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|157864106|ref|XP_001687599.1| adenylate cyclase regulatory protein-like protein [Leishmania major
strain Friedlin]
gi|68223810|emb|CAJ02042.1| adenylate cyclase regulatory protein-like protein [Leishmania major
strain Friedlin]
Length = 572
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 170/397 (42%), Gaps = 72/397 (18%)
Query: 3 CLKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTA------------DGIALLSS 49
CLK L L C +++ G +L S S+L++ + G A GI LLS+
Sbjct: 173 CLKSLQLRECPRLSHLGWNQILNSQSSLQESSGQDGGCAALLSVSVFRCPAFQGIGLLSA 232
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV-----SNRGAAVLKMFPRLSFL 104
+L + ++ L +L+ LE LD+ G Q + RGA L+ L
Sbjct: 233 APHLREFRAQRVRISSL--DALRECRHLELLDVGGCQQVCCIEALRGAKALRY---LDLS 287
Query: 105 NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIE 164
N A + + L ++LE +NLS C L+ E L ++ + T E + +
Sbjct: 288 NTAVSDIGALSQCTALERVNLSGCLRLRSLDSLECCTELRELQASRTNI----ETLIGLR 343
Query: 165 -TSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGD----------DSVEMVACV- 211
L +DVS ++L LT + L H+DLS + + D +SV + C
Sbjct: 344 LCRALKKVDVSGCAALRDAAALTHLSQLTHVDLSFTAVDDVSSLAYYSGLESVRLRGCRY 403
Query: 212 ------------GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAISYM 258
LR+L+LSNT S + P LE L ++G T++ D IS +
Sbjct: 404 LRDYSPPHNLEDAPPLRSLDLSNTSVCS--ISEWGRCPPRLEKLRMNGCTRLSD--ISVL 459
Query: 259 SMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPL 318
L+ +D+ NT + + L+ AL+ L R++ T++SD ++ L
Sbjct: 460 QSSTGLRIVDLGNTSVHSI-------SPLISCAPALEEL----RMH-GCTELSDISV--L 505
Query: 319 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
+ L + L N S+ VS +L++ S+L L I D
Sbjct: 506 QSASRLRVVDLDNTSVRSVSPLRLAA-SELEELRIND 541
>gi|158336627|ref|YP_001517801.1| internalin A protein [Acaryochloris marina MBIC11017]
gi|158306868|gb|ABW28485.1| internalin A protein [Acaryochloris marina MBIC11017]
Length = 627
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 170/375 (45%), Gaps = 61/375 (16%)
Query: 14 KVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQ 72
K+ D +G+K L ++TL L + D ++L +L+ L L + TDL LQ
Sbjct: 173 KIVDISGLKDLTKLNTLN---LRSNAI--DDYSVLLNLKELRQLTVSVREATDLAF--LQ 225
Query: 73 VLTKLEYLDL----WGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
L L +LDL W S +S VL+ P+L+ L+L G ++ NI+ L L+L
Sbjct: 226 DLKDLTHLDLSYNHWISDIS-----VLRNLPKLTHLDL---GSNQISNIAVL--LDLQQL 275
Query: 129 TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMK 188
T S L N+ ++ +S+ T ER LDVS + ++ L ++
Sbjct: 276 THLS-LSSNQ----ISDVSVLQTLQGLER-------------LDVSANEIADIAILQNLQ 317
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L HLD+SS+ + D SV L LN+S+ +L G L L L +S
Sbjct: 318 GLTHLDISSNEVSDISVLQDLTT---LTQLNVSSNEI--IDYSVLQG-LTQLTSLDVSDN 371
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDLVLS------LTALQNLNHL 300
Q+ + IS + + SL +++S + +Q + L LS + LQN L
Sbjct: 372 QMSE--ISDLQGLHSLTSLNLSYNQLSDISVLQDLKQLATLNLSYNPVSDIAVLQNFKDL 429
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
LNL TQ++D L L K LI L L + +TD+S L L L L++ D L++
Sbjct: 430 TTLNLSFTQITD--LSHLQDLKGLISLDLHSNQITDIS--ALQDLEGLYRLNVSDNQLSD 485
Query: 361 -SGLGSFKPPRSLKL 374
+ L K SL L
Sbjct: 486 IAALRKLKGLFSLNL 500
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 35/390 (8%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
+L + L ++L T ++ + LS L+NL+ LDL + DL +Q L +L L
Sbjct: 113 YLQPTTNLTTVYLKTTNIS--DYSFLSDLKNLTHLDLSNNQIADLSF--IQDLKQLTSLG 168
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNL---AWTGVTKLPNISSLECLNLSNCTIDSILEGNE 138
L +++ + LK +L+ LNL A + L N+ L L +S + L +
Sbjct: 169 LASNKIVDISG--LKDLTKLNTLNLRSNAIDDYSVLLNLKELRQLTVS-VREATDLAFLQ 225
Query: 139 NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS 198
+ L + L+ +I++ + L+ LD+ ++ +S L ++ L HL LSS+
Sbjct: 226 DLKDLTHLDLSYNHWISDISVLRNLPK--LTHLDLGSNQISNIAVLLDLQQLTHLSLSSN 283
Query: 199 MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYM 258
I D SV + G L L++S A + IL +L L L +S ++ D IS +
Sbjct: 284 QISDVSV-LQTLQG--LERLDVSANEI--ADIAILQ-NLQGLTHLDISSNEVSD--ISVL 335
Query: 259 SMMPSLKFIDISNTDIKGF--IQQVGAETDLVLS------LTALQNLNHLERLNLEQTQV 310
+ +L +++S+ +I + +Q + T L +S ++ LQ L+ L LNL Q+
Sbjct: 336 QDLTTLTQLNVSSNEIIDYSVLQGLTQLTSLDVSDNQMSEISDLQGLHSLTSLNLSYNQL 395
Query: 311 SDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
SD ++ L K+L L+L ++D+++ L + LT L++ +T+ L + +
Sbjct: 396 SDISV--LQDLKQLATLNLSYNPVSDIAV--LQNFKDLTTLNLSFTQITD--LSHLQDLK 449
Query: 371 SLKLLDLHGGWLLTEDAILQFCKMHPRIEV 400
L LDLH +T+ + LQ + R+ V
Sbjct: 450 GLISLDLHSNQ-ITDISALQDLEGLYRLNV 478
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 32/213 (15%)
Query: 143 LAKISLAGTTFINEREAFLYIE-TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 201
L+ I+L+G + A Y++ T+ L+ + + +++S + FL+ +K L HLDLS++ I
Sbjct: 98 LSTIALSG----QDVTAASYLQPTTNLTTVYLKTTNISDYSFLSDLKNLTHLDLSNNQIA 153
Query: 202 DDSVEMVACVGANLRNL-NLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYM 258
D S +++L L++ +S + ++G L L L+L IDDY++ +
Sbjct: 154 DLSF---------IQDLKQLTSLGLASNKIVDISGLKDLTKLNTLNLRSNAIDDYSV--L 202
Query: 259 SMMPSLKFIDIS---NTDIKGFIQQVGAETDLVLS-------LTALQNLNHLERLNLEQT 308
+ L+ + +S TD+ F+Q + T L LS ++ L+NL L L+L
Sbjct: 203 LNLKELRQLTVSVREATDL-AFLQDLKDLTHLDLSYNHWISDISVLRNLPKLTHLDLGSN 261
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 341
Q+S+ + L ++L HLSL + ++DVS+ Q
Sbjct: 262 QISNIAV--LLDLQQLTHLSLSSNQISDVSVLQ 292
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 152/317 (47%), Gaps = 43/317 (13%)
Query: 43 GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS 102
IA+L LQ L+ L L ++D+ + LQ L LE LD+ +++++ A+L+ L+
Sbjct: 265 NIAVLLDLQQLTHLSLSSNQISDVSV--LQTLQGLERLDVSANEIAD--IAILQNLQGLT 320
Query: 103 FLNLAWTGVTK---LPNISSLECLNLS-NCTID-SILEGNENKAPLAKISLAGTTFINER 157
L+++ V+ L ++++L LN+S N ID S+L+G L +S + I++
Sbjct: 321 HLDISSNEVSDISVLQDLTTLTQLNVSSNEIIDYSVLQGLTQLTSL-DVSDNQMSEISDL 379
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG--ANL 215
+ L+ L++S + LS L +K L L+LS + + D +A + +L
Sbjct: 380 QGL-----HSLTSLNLSYNQLSDISVLQDLKQLATLNLSYNPVSD-----IAVLQNFKDL 429
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLE---ILSLSGTQIDDYAISYMSMMPSLKFIDISN- 271
LNLS T+ + HL +L+ L L QI D IS + + L +++S+
Sbjct: 430 TTLNLSFTQITDLS------HLQDLKGLISLDLHSNQITD--ISALQDLEGLYRLNVSDN 481
Query: 272 --TDIKGFIQQVGA-----ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
+DI + G + +L + ALQ+L L LN+ Q+SD ++ L L
Sbjct: 482 QLSDIAALRKLKGLFSLNLSINQILDIAALQDLTRLTSLNVSHNQLSDISV--LQGLTRL 539
Query: 325 IHLSLRNASLTDVSLHQ 341
L L + D+S+ Q
Sbjct: 540 NSLDLGANQIADISVLQ 556
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|423420629|ref|ZP_17397718.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
gi|401101196|gb|EJQ09187.1| hypothetical protein IE3_04101 [Bacillus cereus BAG3X2-1]
Length = 779
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 245 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 297
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 298 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 354
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 355 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 405
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 406 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 452
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 453 PLSNLVNLQKL 463
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 263 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 317
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L G + N++ L LSG QI+D
Sbjct: 318 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 341
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 342 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 386
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 387 KPLYSLPLKDLVLT 400
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 61 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 111
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 239 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 298
Query: 112 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 299 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 352
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 353 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 403
Query: 230 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 279
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 404 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 461
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 462 KLDLEANYISDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 514
>gi|51850115|dbj|BAD42399.1| leucine-rich repeat protein [Ralstonia solanacearum]
Length = 1035
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 36/231 (15%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 240
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 98 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 154
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
E L+++G +I D ++ PSLK ++ ++ G I GA L S T L
Sbjct: 155 ESLNVAGAEIGDGGARLLAANPSLKSLNAAS----GGISASGARM-LAESPT-------L 202
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 357
E L+L Q + DA L+ + L HL++RN +TDV L+ L +L + + V
Sbjct: 203 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDVGTRALALNPALVSLDLGNLVTET 262
Query: 358 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
+T G + RSLK L + G L +D + +
Sbjct: 263 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 313
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LDLS C V++AG+ +L + L L LS+TG+ G L++ +L+ L+L G
Sbjct: 633 VRHLDLSGCTGSAVSEAGLAYLARL-PLASLDLSDTGIGNRGAQALAASASLTSLNLSGN 691
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ +L T L LD+ + + N GA L L+ L L TG+ +E
Sbjct: 692 GIGTAGAEALGRNTVLTALDISANPIRNAGAQALASSRSLTSLELRDTGIED----GGIE 747
Query: 122 CLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L +N + S+ + GN+ ++++ A L+ L + L+
Sbjct: 748 AL-AANTVLRSLDISGND---------------LSDQSAAALAANRTLTSLKANGCGLTN 791
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L ++++L L++ S+ IGD V +A A+LR+LNLS + G+ LA
Sbjct: 792 DMAQQLARIRSLRTLEVGSNSIGDAGVLTIA-RNASLRSLNLSRNSITPQGLYPLA 846
>gi|403257101|ref|XP_003921175.1| PREDICTED: F-box/LRR-repeat protein 13 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 247 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 306
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLKM----FPRLS 102
TD L+ L + KL YLDL G +Q+S +G +L + P L+
Sbjct: 307 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILHLTINDMPTLT 364
Query: 103 -------------FLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 148
++ +TG P+IS LS C + I EGN+ +I+
Sbjct: 365 DNCVKALVEKCSHITSMVFTGA---PHISDCTFKALSTCKLRKIRFEGNK------RITD 415
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEM 207
A FI++ Y S + D + S L+ +K L L+L++ + IGD +
Sbjct: 416 ASFKFIDKN----YPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQ 471
Query: 208 V--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPS 263
+R LNLSN + S V L+ PNL LSL + + I+Y+ + S
Sbjct: 472 FLDGPASIRIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 531
Query: 264 LKFIDISNTDI 274
L ID+S TDI
Sbjct: 532 LVSIDLSGTDI 542
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 171/404 (42%), Gaps = 59/404 (14%)
Query: 20 MKHLLS----ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLV 67
+KH++ +STL++ L+ L G L +NL L++ P TD
Sbjct: 203 VKHMIPDKYIVSTLQRWRLNVLCLNFRGCLLRPKTFRSAGHCRNLQELNVSDCPTFTDES 262
Query: 68 LRSL-QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLS 126
+R + + + YL+L + ++NR +++ PR F NL N+S C +
Sbjct: 263 MRHISEGCPGVLYLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFT 310
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS---SLSRFCF 183
+ + + GN L + L+G T I+ + F YI S L ++ + +L+ C
Sbjct: 311 DKGLQYLNLGN-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGILHLTINDMPTLTDNCV 368
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF------SSAGVGILAGHL 237
++ H+ +SM+ + + C L L RF + A + +
Sbjct: 369 KALVEKCSHI---TSMVFTGAPHISDCTFKALSTCKLRKIRFEGNKRITDASFKFIDKNY 425
Query: 238 PNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLT 292
PNL + ++ + I D ++ +S + L ++++N D+ G Q + +
Sbjct: 426 PNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDV-GLRQFLDGPASI----- 479
Query: 293 ALQNLNHLERLNLEQ-TQVSDATLFPLS-TFKELIHLSLRNAS-LTDVSLHQLSSLSKLT 349
+ LNL Q+SD ++ LS L +LSLRN LT + + ++ L
Sbjct: 480 ------RIRELNLSNCVQLSDVSVMKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFSLV 533
Query: 350 NLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
++ + ++N GL + LK L + + +T+D I FCK
Sbjct: 534 SIDLSGTDISNEGLSVLSRHKKLKELSVSACYRITDDGIQAFCK 577
>gi|343414367|emb|CCD21012.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 1699
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 190/375 (50%), Gaps = 56/375 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L++LDLS C VTD + L + LEKL+LS TG+T + LS L +L +LDL
Sbjct: 797 LQKLDLSHCTGVTD--VSPLSKMIGLEKLYLSHCTGIT--DVPPLSELSSLRMLDLSHCT 852
Query: 63 -VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPN 116
+TD + L L+ L LDL + +++ + L L L+L+ TG+T L
Sbjct: 853 GITD--VSPLSELSSLHTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSE 908
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSF 170
+SSL L+LS+CT G + +PL+++S L+ T I + + + L
Sbjct: 909 LSSLRTLDLSHCT------GITDVSPLSELSSLRTLDLSHCTGITDVSPLSKLSS--LRT 960
Query: 171 LDVSNSS-LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
LD+S+ + ++ L+++ +L LDL S G V ++ + ++LR L+LS+ G
Sbjct: 961 LDLSHCTGITDVSPLSELSSLRTLDL-SHCTGITDVSPLSKL-SSLRTLDLSHC----TG 1014
Query: 230 VGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN----TDIKGFIQQVG 282
+ ++ L +L L LS T I D +S +S + SL+ +D+S+ TD+ +
Sbjct: 1015 ITDVSPLSELSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSKLSS 1072
Query: 283 AET-DL-----VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-L 334
T DL + ++ L L+ L L+L T ++D + PLS L L L + + +
Sbjct: 1073 LRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVS--PLSELSSLRTLDLSHCTGI 1130
Query: 335 TDVS-LHQLSSLSKL 348
TDVS L +LSSL L
Sbjct: 1131 TDVSPLSELSSLRTL 1145
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 84/389 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L+ LDLS C +TD + L S+L L LS TG+T ++ LS +L +LD+
Sbjct: 636 LRTLDLSHCTGITD--VSPLSKFSSLHTLDLSHCTGIT--NVSPLSKFSSLRMLDISHCT 691
Query: 63 -VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+T+ + L L+ L LDL T V+ L +SSL
Sbjct: 692 GITN--VSPLSKLSSLHTLDLSHCT--------------------GITDVSPLSKLSSLR 729
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI----ETSLLSFLDVSNSS 177
L+ S+CT G N +PL+++S T I+ + E S L LD+S+ +
Sbjct: 730 TLDFSHCT------GITNVSPLSELSSLRTLDISHCTGITDVSPLSELSSLRTLDLSHCT 783
Query: 178 -LSRFCFLTQMKALEHLDLS-----------SSMIGDDSVEMVACVG----------ANL 215
++ L+++ L+ LDLS S MIG + + + C G ++L
Sbjct: 784 DITNVSPLSKISTLQKLDLSHCTGVTDVSPLSKMIGLEKLYLSHCTGITDVPPLSELSSL 843
Query: 216 RNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISN- 271
R L+LS+ G+ ++ L +L L LS T I D +S +S + SL+ +D+S+
Sbjct: 844 RMLDLSHC----TGITDVSPLSELSSLHTLDLSHCTGITD--VSPLSELSSLRTLDLSHC 897
Query: 272 ---TDIKGFIQQVGAET-DL-----VLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTF 321
TD+ + T DL + ++ L L+ L L+L T ++D + PLS
Sbjct: 898 TGITDVSPLSELSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITDVS--PLSKL 955
Query: 322 KELIHLSLRNAS-LTDVS-LHQLSSLSKL 348
L L L + + +TDVS L +LSSL L
Sbjct: 956 SSLRTLDLSHCTGITDVSPLSELSSLRTL 984
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 179/365 (49%), Gaps = 59/365 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L+ LDLS C +TD + L +S+L L LS TG+T ++ LS L +L LDL
Sbjct: 935 LRTLDLSHCTGITD--VSPLSKLSSLRTLDLSHCTGIT--DVSPLSELSSLRTLDLSHCT 990
Query: 63 -VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPN 116
+TD+ L L+ L LDL + +++ + L L L+L+ TG+T L
Sbjct: 991 GITDV--SPLSKLSSLRTLDLSHCTGITD--VSPLSELSSLRTLDLSHCTGITDVSPLSE 1046
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS------LAGTTFINEREAFLYIETSLLSF 170
+SSL L+LS+CT G + +PL+K+S L+ T I + E S L
Sbjct: 1047 LSSLRTLDLSHCT------GITDVSPLSKLSSLRTLDLSHCTGITDVSPL--SELSSLRT 1098
Query: 171 LDVSNSS-LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
LD+S+ + ++ L+++ +L LDL S G V ++ + ++LR L+LS+ G
Sbjct: 1099 LDLSHCTGITDVSPLSELSSLRTLDL-SHCTGITDVSPLSEL-SSLRTLDLSHC----TG 1152
Query: 230 VGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD 286
+ ++ L +L L LS T I D +S +S + SL +++S+ G
Sbjct: 1153 ITDVSPLSELSSLRTLDLSHCTGITD--VSPLSKLSSLCTLELSH--CTGITD------- 1201
Query: 287 LVLSLTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLS 343
++ L L+ L L+L + ++D + PLS + L L + + +TDVS L LS
Sbjct: 1202 ----VSPLSELSSLRTLDLSHCRGITDVS--PLSELSNFVQLDLSHCTGITDVSPLSVLS 1255
Query: 344 SLSKL 348
SL L
Sbjct: 1256 SLRTL 1260
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 183/398 (45%), Gaps = 79/398 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLSSLQNLSVLDLGGLP 62
L LDLS C +T+ + L S+L L +S TG+T ++ LS L +L LDL
Sbjct: 659 LHTLDLSHCTGITN--VSPLSKFSSLRMLDISHCTGIT--NVSPLSKLSSLHTLDLSHCT 714
Query: 63 -VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTK---LPN 116
+TD+ L L+ L LD + ++N + L L L+++ TG+T L
Sbjct: 715 GITDV--SPLSKLSSLRTLDFSHCTGITN--VSPLSELSSLRTLDISHCTGITDVSPLSE 770
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS---------LAGTTFINEREAFLYIETSL 167
+SSL L+LS+CT N +PL+KIS G T ++ + +E
Sbjct: 771 LSSLRTLDLSHCT------DITNVSPLSKISTLQKLDLSHCTGVTDVSPLSKMIGLEKLY 824
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLS-----------SSMIGDDSVEMVACVG---- 212
LS + ++ L+++ +L LDLS S + ++++ C G
Sbjct: 825 LSHC----TGITDVPPLSELSSLRMLDLSHCTGITDVSPLSELSSLHTLDLSHCTGITDV 880
Query: 213 ------ANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSLS-GTQIDDYAISYMSMMPS 263
++LR L+LS+ G+ ++ L +L L LS T I D +S +S + S
Sbjct: 881 SPLSELSSLRTLDLSHC----TGITDVSPLSELSSLRTLDLSHCTGITD--VSPLSELSS 934
Query: 264 LKFIDISN----TDIKGFIQQVGAET-DL-----VLSLTALQNLNHLERLNLEQ-TQVSD 312
L+ +D+S+ TD+ + T DL + ++ L L+ L L+L T ++D
Sbjct: 935 LRTLDLSHCTGITDVSPLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTLDLSHCTGITD 994
Query: 313 ATLFPLSTFKELIHLSLRNAS-LTDVS-LHQLSSLSKL 348
+ PLS L L L + + +TDVS L +LSSL L
Sbjct: 995 VS--PLSKLSSLRTLDLSHCTGITDVSPLSELSSLRTL 1030
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 63/372 (16%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
CL+ LDLS C +TD + L +S L L LS GI +S L NLS L + GL
Sbjct: 359 CLRTLDLSHCTGITDVSL--LSKLSGLHTLGLSH----CTGITDVSPLSNLSGLRMLGLS 412
Query: 63 ----VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTK--- 113
+TD + L L+ L L L + +++ + L +F L L ++ TG+T
Sbjct: 413 HCTGITD--VSPLSELSSLRTLGLSHCTGITD--VSPLSVFSSLRTLGISHCTGITDVSP 468
Query: 114 LPNISSLECLNLSNCTIDSILEGNENKAPLA------KISLAGTTFINEREAFLYIETSL 167
L ++ L+ L LS+CT G + PL+ K+ L+ T I + + +
Sbjct: 469 LSKMNGLQKLYLSHCT------GITDVPPLSALSSFEKLDLSHCTGITDVSPLSVLSS-- 520
Query: 168 LSFLDVSNSS-LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
L LD+S+ + ++ L++M L+ L LS D + A ++ L+LS+
Sbjct: 521 LRTLDISHCTGITDVSPLSKMNGLQKLYLSHCTGITDVPPLSAL--SSFEKLDLSHC--- 575
Query: 227 SAGVGILA--GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
G+ ++ L +L L LS + ++ P LKF + DI
Sbjct: 576 -TGITDVSPLSKLSSLHTLDLS------HCTGITNVSPLLKFSSLRMLDISHCTG----- 623
Query: 285 TDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
+ +++ L L+ L L+L T ++D + PLS F L L L + + + +S
Sbjct: 624 ---ITNVSPLSELSSLRTLDLSHCTGITDVS--PLSKFSSLHTLDLSHCT----GITNVS 674
Query: 344 SLSKLTNLSIRD 355
LSK ++L + D
Sbjct: 675 PLSKFSSLRMLD 686
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|356566696|ref|XP_003551566.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Glycine max]
Length = 1188
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
S L+ L +S T + GI +++L LS+LDL + S+ L +L YLDL +
Sbjct: 362 SPLQTLIVSGTNFSG-GIPPINNLGQLSILDLSNCHFNGTLPSSMSRLRELTYLDLSFND 420
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVT-----KLPNISSLECLNLSNCTIDSILEGNENKA 141
+ + + L M L+ L+ G T + +L ++L + +D L +
Sbjct: 421 FTGQIPS-LNMSKNLTHLDFTRNGFTGSITYHFGGLRNLLQIDLQDNFLDGSLPSSLFSL 479
Query: 142 PLAK-ISLAGTTFINEREAFLYIETSLLSFLDVS----NSSLSRFCFLTQMKALEHLDLS 196
PL + I L+ F ++ + I +S L LD+S N S+ F Q+++L L+LS
Sbjct: 480 PLLRSIRLSNNNFQDQLNKYSNISSSKLEVLDLSGNDLNGSIPTDIF--QLRSLSVLELS 537
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFS----SAGVGILAGHLPNLEILSLSGTQIDD 252
S+ + V NL L LS+ S A VG+++ +PN++I+ L+ + +
Sbjct: 538 SNKLNGTLKLDVIHRLENLTTLGLSHNHLSIDTNFADVGLISS-IPNMKIVELASCNLTE 596
Query: 253 YAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLSLTALQNL 297
+ S++ + +D+S+ +I+G +I Q+ + L LS L NL
Sbjct: 597 FP-SFLRNQSKITTLDLSSNNIQGSIPTWIWQLNSLVQLNLSHNLLSNL 644
>gi|71668063|ref|XP_820975.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886340|gb|EAN99124.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 930
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 347 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 406
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
+ + A L L +L L + + D +++ + P L +D+ Q G T L
Sbjct: 407 SLQWLRA--LNQLRVLDLGYSSVTDDSLTALRFCPELAKLDL---------QWCGRITSL 455
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-ASLTDVSLHQLSSLS 346
+ + AL + L LNL +T V+D L PL F L +SL +++DV++ L +L+
Sbjct: 456 MCLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALEWISLEGCGAVSDVNV--LCNLT 511
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+L + + +TN G+ S ++L+++ + + LT+ L
Sbjct: 512 RLREVDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANFL 554
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 184/456 (40%), Gaps = 104/456 (22%)
Query: 25 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 83
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L LDL
Sbjct: 365 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLDLG 423
Query: 84 GSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN------ 137
S V++ L+ P L+ L+L W G I+SL CL + C DS+ E N
Sbjct: 424 YSSVTDDSLTALRFCPELAKLDLQWCG-----RITSLMCLVGALC--DSLRELNLTETSV 476
Query: 138 --------ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS---------- 179
++ A L ISL G +++ + + L +DV + ++
Sbjct: 477 TDEGLVPLKDFAALEWISLEGCGAVSDVNVLCNL--TRLREVDVGRTRVTNRGVVSLSQC 534
Query: 180 --------RFC-------FLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNT 223
R C FL ++ LE +DLS + ++ + A GA +LR L L +
Sbjct: 535 QALRVMRMRQCYRLTDANFLGALQQLEEVDLSDCPVTNEGI--AALFGARSLRKLRLQSC 592
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDD-----------------YAISYMSM------ 260
+ V L G L +L +L L T +D+ +++ S+
Sbjct: 593 -HAVNDVNFLGG-LEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHSLQQWNAA 650
Query: 261 --MPSLKFIDISNT----DIKGFIQQVGA-ETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+P LK +D+S T D F++ ET LSL +N+ HL+ L L+ + +
Sbjct: 651 LFLPRLKRLDLSTTKVTSDALSFLRMCPVLET---LSLRGCKNITHLDFLILQPSSGTGV 707
Query: 314 TLF------PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
P T ++I +N S + ++ D V+ ++ + +
Sbjct: 708 CAIVPRDVEPHDTVGDIIAGKEKNPD---------DGPSPIETMTTNDGVIKSTAVAAVV 758
Query: 368 PPRSLKLLDLHGGWLLTED-AILQFCKMHPRIEVWH 402
L+ L L G + E LQ+C R+ + H
Sbjct: 759 SRHRLRELTLSGTGVTDEGLRALQYCPGLERLRLAH 794
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 53/331 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ + + +C ++TDA L ++ LE++ LS+ +T +GIA L ++L L L
Sbjct: 537 LRVMRMRQCYRLTDANF--LGALQQLEEVDLSDCPVTNEGIAALFGARSLRKLRLQSCHA 594
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL---------AWTGVTKL 114
+ V L L L LDL + V G+ L P+L L + W L
Sbjct: 595 VNDV-NFLGGLEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHSLQQWNAALFL 653
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYIETSLLSFLDV 173
P + L+ L+ + T D++ P L +SL G I L FL +
Sbjct: 654 PRLKRLD-LSTTKVTSDAL--SFLRMCPVLETLSLRGCKNITH-----------LDFLIL 699
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIG-----DDSVEMVACVGANLRNLNLSNTRFSSA 228
SS + C + H + + G DD + + N S+A
Sbjct: 700 QPSSGTGVCAIVPRDVEPHDTVGDIIAGKEKNPDDGPSPIETMTTN------DGVIKSTA 753
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
+++ H L L+LSGT + D + + P L+ + +++ K F TD+
Sbjct: 754 VAAVVSRH--RLRELTLSGTGVTDEGLRALQYCPGLERLRLAH--CKNF-------TDVA 802
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
+ L+ L+ L+ L+L T V+ + L LS
Sbjct: 803 V----LRWLSQLKELDLSATGVTGSGLAKLS 829
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ G +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFGFNQLTDIT--PLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDALKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|444725325|gb|ELW65894.1| Toll-like receptor 13 [Tupaia chinensis]
Length = 950
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 34/353 (9%)
Query: 50 LQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT 109
L+NL++L+L + V S Q L+ LE L L +Q+++ RL L+L+
Sbjct: 109 LENLTLLNLVENKIQS-VNTSFQGLSNLETLLLSHNQITHIHKNAFVPLVRLKRLSLSRN 167
Query: 110 GVTKLPNI-------SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 162
++ N+ LE L+L+N +I S+ + L +SL G + + L
Sbjct: 168 FISNFSNVLEAVQHLPCLEHLDLTNNSIMSLDHSPTSLVSLTYLSLQGNKLMELNFSVLS 227
Query: 163 IETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLN 219
+ L+ LDVS +S +L + L+ L+LS + +EM++ NLR ++
Sbjct: 228 LPN--LTTLDVSRNSHQAIQNVYLETLPQLKSLNLSGVQV---QLEMLSVKHLQNLREID 282
Query: 220 LSNTRFSSAGVGI-----LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
LSN S + + L +L LE L D I +++ L F+D+
Sbjct: 283 LSNGELRSGHLNLSTVCHLLRNLLILETLVFQKNATDAGGIKHLANCTRLLFLDL----- 337
Query: 275 KGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
G +DLV L+ + + L+RL+L + Q+S + S+ + L L L +
Sbjct: 338 -------GQTSDLVDLNDSEFNAMPSLQRLHLNKCQLSFVSNRTWSSLQNLTALDLSHNM 390
Query: 334 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED 386
S L L +LS+ +T +FK SLK L+L G W++ D
Sbjct: 391 FNSFPDFAFSPLKCLQSLSLSRNPITELNNMAFKGLNSLKELNLAGCWIVAID 443
>gi|49481764|ref|YP_034811.1| internalin protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49333320|gb|AAT63966.1| possible internalin protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 954
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 114 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISNLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 232 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 404
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|290993787|ref|XP_002679514.1| predicted protein [Naegleria gruberi]
gi|284093131|gb|EFC46770.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 123/296 (41%), Gaps = 55/296 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T LK L+L + D G++ +S LE L L LT+ + L + +L LDL
Sbjct: 1 ITTLKSLNLHH-NNIEDEGVE-FISDLKLESLGLCRCALTSKSTSFLCKITSLKKLDLSE 58
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK------L 114
+ D L +LT LE LDL + + + +L L L +++ L
Sbjct: 59 NIINDECGFYLSMLTDLEELDLHDNSIEGKCFKEFSSLKKLKTLKLCQNRISQEEAMIYL 118
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
SL+ LNLS +N + I L+ T + E E L+ ++
Sbjct: 119 SQTVSLKSLNLS-----------QNNIGQSSIHLSNLTNLKELE---------LNLCKIT 158
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE------------MVAC---------VG- 212
LS F + +K LE L +S + +G D E + C +G
Sbjct: 159 KGGLS---FFSNLKKLEILKISQNSLGYDDFEELSHLVRLRILSIFGCGLEKNSTNFIGN 215
Query: 213 -ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
LRNL + + AG+ L+G L NL+IL L T+I D I ++S M L+ +
Sbjct: 216 IKTLRNLEMFSNNIYDAGLASLSG-LVNLQILKLDSTRITDTGIQHLSQMKELEIL 270
>gi|196034771|ref|ZP_03102179.1| internalin protein [Bacillus cereus W]
gi|195992814|gb|EDX56774.1| internalin protein [Bacillus cereus W]
Length = 984
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 114 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 232 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|397646482|gb|EJK77289.1| hypothetical protein THAOC_00890 [Thalassiosira oceanica]
Length = 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 59/322 (18%)
Query: 10 SRCVKVTDAGM------------------------KHLLSISTLEKLWLSETGLTADGIA 45
S+C +TD G+ + SI+ L+ L L+ +T DG+
Sbjct: 365 SQCDLITDDGLIFLGELDLLEELSLGNKSCGMAIQQRNRSIA-LKTLRLARCAITNDGLD 423
Query: 46 LLSSLQNLSVLDLGGLPVTDLVL-RSLQVLTK---------------LEYLDLWGSQVSN 89
L LQ+L LD+ G ++ L SL+ LT LE L+L +Q+S+
Sbjct: 424 YLEQLQSLEDLDINGCSLSSTALGESLEKLTNLNSLDASHCPGILPGLEVLNLADTQISD 483
Query: 90 RGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTIDSILEGNENKAPLAKIS 147
+ + L L+L + V+ L +++SLE L+ N +DS G+E + +++
Sbjct: 484 NAMSKVAKLAGLRSLSLFYCNVSSRGLRHLASLEKLDSLN--LDSRDIGDEGRP--NRVT 539
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS--SSMIGDDSV 205
G ++I + + ++ + D+ + + + ALE L+LS S+ +
Sbjct: 540 DLGCSYIAKIKTLTTLQLAGGGVGDLGCA------HIATIDALESLNLSQNESITNRGAA 593
Query: 206 EMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI-SYMSMMPSL 264
+ A +NLR LNLSNTR +S + G L L+ L+L G ++D I S +P+L
Sbjct: 594 SLAAL--SNLRALNLSNTRVTSNALKFFHG-LSKLQSLALYGCIMEDSPIESLQDEVPTL 650
Query: 265 KFIDISNTDIKGFIQQVGAETD 286
+ + ++N + + +G + D
Sbjct: 651 RCLRLNNANDNDGVIGIGHDYD 672
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNH 299
L+ L L+ I + + Y+ + SL+ +DI+ + + T L SL L NLN
Sbjct: 407 LKTLRLARCAITNDGLDYLEQLQSLEDLDINGCSL--------SSTALGESLEKLTNLNS 458
Query: 300 L------------ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
L E LNL TQ+SD + ++ L LSL +++ L L+SL K
Sbjct: 459 LDASHCPGILPGLEVLNLADTQISDNAMSKVAKLAGLRSLSLFYCNVSSRGLRHLASLEK 518
Query: 348 LTNLSI---------RDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
L +L++ R +T+ G ++L L L GG +
Sbjct: 519 LDSLNLDSRDIGDEGRPNRVTDLGCSYIAKIKTLTTLQLAGGGV 562
>gi|449435625|ref|XP_004135595.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 169/382 (44%), Gaps = 47/382 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGG 60
LKE+ L +C+ VTD G+ ++ LE+L L +D G+ LL NL LDL
Sbjct: 146 LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSY 205
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGS--------QVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L VT+ LRS+ L KLE L + G Q G LK ++ G+T
Sbjct: 206 LKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLT 265
Query: 113 K-LPNISSLECLNLSNC----TIDSILEGNENKAPLAKISLAGT----TFIN--EREAFL 161
L LE L+ S C + DSI +N L I L GT TF N
Sbjct: 266 SILRGHDGLEQLDASYCISELSTDSIYS-LKNLKCLKAIRLDGTQLSSTFFNVISVHCEY 324
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNL 220
+E L L V+++++ + +++ +L+ L+L+ I D ++ A L +L L
Sbjct: 325 LVELGLSKCLGVTDANIIQ--LISRCISLKVLNLTCCHSITDAAISKTATSCLKLMSLKL 382
Query: 221 -SNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDY---AISYMSMMPSLKFIDISNTDIK 275
S + + LA + P+LE L L+ ++D +S S + SLK +N K
Sbjct: 383 ESCNMITERSLDQLALNCPSLEELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDK 442
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNAS 333
G I ++G N + L+L + + DA L LS+ K+L+ L+L +
Sbjct: 443 GLI-KIGL------------NCKRIHELDLYRCLGIGDAGLEALSSGCKKLMKLNLSYCN 489
Query: 334 -LTDVSLHQLSSLSKLTNLSIR 354
LTD + + L +L L IR
Sbjct: 490 KLTDRGMGYIGHLEELCVLEIR 511
>gi|229120202|ref|ZP_04249453.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
gi|228663243|gb|EEL18832.1| hypothetical protein bcere0016_5180 [Bacillus cereus 95/8201]
Length = 1019
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 114 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 247 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 306
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 307 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 361
Query: 232 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 362 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 404
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 405 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 450
>gi|302804592|ref|XP_002984048.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
gi|300148400|gb|EFJ15060.1| hypothetical protein SELMODRAFT_445748 [Selaginella moellendorffii]
Length = 657
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 57/384 (14%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETGLTADGIALLSSLQNLS-----VLD 57
L +LD+SRC V+DAG+ L + +LE+L LS + D LL++ Q VLD
Sbjct: 256 LLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDD--LLATFQKFDHLQSIVLD 313
Query: 58 -----LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
GLP + R + L +L G V++RG A + G T
Sbjct: 314 GCEIARNGLP---FIARGCKQLKELSLSKCRG--VTDRGIAAVAQ------------GCT 356
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER------EAFLYIETS 166
L ++ C L++ ++ I +++ L + + + I E E +E
Sbjct: 357 ALHKLNLTCCRELTDASLCRI---SKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEEL 413
Query: 167 LLSFLDVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR- 224
+ ++S++ L ++++ AL L L S I D V + NLR L+ ++
Sbjct: 414 DFTECNMSDTGLK---YISKCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKG 470
Query: 225 FSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
AGV +A P L++L LS ++I D ++ +S + L+ + +++G + + +
Sbjct: 471 IGDAGVAAIASGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRV-----ELRGCV--LVS 523
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
T L + + + L ++ +Q+ +A + LS F L + N S +S L
Sbjct: 524 STGLAVMASGCKRLTEIDIKRC--SQIGNAGVSALSFFCP--GLRMMNISYCPISNAGLL 579
Query: 344 SLSKLTNL-SIRDAVLTNSGLGSF 366
SL +L+ L S+R L N + F
Sbjct: 580 SLPRLSCLQSVRLVHLKNVTVDCF 603
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 172/415 (41%), Gaps = 76/415 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-------------------------- 37
L ++DLS C + D+ + L IS L+ L L+
Sbjct: 129 LTDVDLSYCSNLKDSDVLALAQISNLQALRLTGCHSITDIGLGCLAAGCKMLKLLTLKGC 188
Query: 38 -GLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAV 94
G+T GIAL++ + + L LDL VTD L S+ L LE L+L + V + G
Sbjct: 189 LGITDIGIALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRS 248
Query: 95 LKMFPRLSFLNLAWTGVTKLPNIS------------SLECLNLSNCTI--DSILEGNENK 140
LK R S L L V++ N+S SLE L LS C+I D +L +
Sbjct: 249 LKRSCR-SLLKL---DVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKF 304
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSN---------SSLSRFCFLTQMKALE 191
L I L G F+ L L +S +++++ C AL
Sbjct: 305 DHLQSIVLDGCEIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGC-----TALH 359
Query: 192 HLDLSSSM-IGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L+L+ + D S+ ++ L +L + S + + G+ L P LE L +
Sbjct: 360 KLNLTCCRELTDASLCRISKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECN 419
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
+ D + Y+S +L+ + + GF + TD ++ + N L L+ +++
Sbjct: 420 MSDTGLKYISKCTALRSLKL------GFCSTI---TDKGVAHIGARCCN-LRELDFYRSK 469
Query: 310 -VSDATLFPL-STFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
+ DA + + S +L L L S +TD SL LS L +L + +R VL +S
Sbjct: 470 GIGDAGVAAIASGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRVELRGCVLVSS 524
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 30/154 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK LDLS C K+TD ++ L + L+++ L G L+SS L+V+ G +
Sbjct: 486 LKLLDLSYCSKITDCSLQSLSQLRELQRVELR-------GCVLVSS-TGLAVMASGCKRL 537
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-PRLSFLNLAWT-----GVTKLPNI 117
T++ ++ SQ+ N G + L F P L +N+++ G+ LP +
Sbjct: 538 TEIDIKRC-------------SQIGNAGVSALSFFCPGLRMMNISYCPISNAGLLSLPRL 584
Query: 118 SSLEC---LNLSNCTIDSILEGNENKAPLAKISL 148
S L+ ++L N T+D + +N L + L
Sbjct: 585 SCLQSVRLVHLKNVTVDCFVTVLQNCKSLKNVKL 618
>gi|148235993|ref|NP_001082850.1| leucine rich repeat and Ig domain containing 4b precursor [Danio
rerio]
Length = 604
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 302
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV------SLHQLSSL----------- 345
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 346 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 375
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|414586492|tpg|DAA37063.1| TPA: hypothetical protein ZEAMMB73_067914 [Zea mays]
Length = 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C +TD+ MK+L ++ L +L LS ++A G++ L L L L+L G VT + L +
Sbjct: 243 CNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRGLHKLGHLNLEGCAVTAVCLEVI 302
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L L L+L + + G LK +L L+L + +T
Sbjct: 303 SELASLVLLNLSRCGICDEGCENLKGLTKLKALSLGFNQIT 343
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 33/174 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDL---- 58
++ L C ++++ G+K L S L L + + +TA+G ++L NL LDL
Sbjct: 161 MQSLACDYCDQISEHGLKTLSGFSNLTSLSIKKCAAVTAEGAKAFANLVNLVNLDLERCP 220
Query: 59 ---GGL------------------PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKM 97
GGL +TD ++ L LT L L L ++S G + L+
Sbjct: 221 KINGGLIHLKGLKKLEKLNLRYCNGITDSDMKYLSDLTNLRELQLSSCKISAFGVSYLRG 280
Query: 98 FPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
+L LNL VT + ++SL LNLS C I EG EN L K+
Sbjct: 281 LHKLGHLNLEGCAVTAVCLEVISELASLVLLNLSRCGICD--EGCENLKGLTKL 332
>gi|402081470|gb|EJT76615.1| SCF E3 ubiquitin ligase complex F-box protein grrA [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 829
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 196/439 (44%), Gaps = 79/439 (17%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSET-GLTADG-IALLSSLQNLSVLDLGG 60
+K L+L+ KV D + L + +E+L L+ GLT G IAL+ +L LD+
Sbjct: 167 IKRLNLAALADKVNDGSVMPLSGCNRVERLTLTSCKGLTDSGLIALVQDNSHLLALDMSS 226
Query: 61 L-PVTDL-VLRSLQVLTKLEYLDLWG-SQVSNRGAAVL----KMFPRLSFLNLAWTGVTK 113
+ +TD +L + +L+ L++ G +++SN AVL + RL + G T
Sbjct: 227 VDQITDASILAIAEHCKRLQGLNVSGCTRISNDSMAVLAQSCRYIKRLKLNDCRQLGDTA 286
Query: 114 L-------PN---ISSLECLNLSNCTIDSILEGNENKA-PLAKISLAGTTFINEREAFLY 162
+ PN I ++C N+ N +I S+L +KA L ++ L I++
Sbjct: 287 IQAFAESCPNLLEIDLMQCRNVGNASITSVL----SKALSLRELRLVFCDLIDDG----- 337
Query: 163 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLS 221
+FL + N T+ + L LDL+S S + D +VE + V +RNL LS
Sbjct: 338 ------AFLSLPN---------TRFEHLRILDLTSCSALTDRAVEKIINVAPRVRNLVLS 382
Query: 222 NTR-FSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYM-SMMPSLKFIDISNTDIKGFI 278
R + A V +A NL + L I D A+ + + +++ID+
Sbjct: 383 KCRNITDAAVHAIAELGKNLHYVHLGHCHNITDEAVKKLVAKCNRIRYIDL--------- 433
Query: 279 QQVGAETDLV-LSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNASLTD 336
G T L S+T L L L+R+ L + + ++D ++F L+ + H R+A
Sbjct: 434 ---GCCTHLTDDSVTQLATLPKLKRIGLVKCSGITDESIFALAKANQR-HRQRRDAQGNP 489
Query: 337 V--SLHQLSSLSKL-----TNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+ S + SSL ++ TNL+++ + L NS PR L L L G + +
Sbjct: 490 IQNSYYSQSSLERVHLSYCTNLTLKGIIRLLNSC------PR-LTHLSLTGVQAFLREDL 542
Query: 389 LQFCKMHPRIEVWHELSVI 407
FC+ P H+ +V
Sbjct: 543 SAFCRDAPPEFTEHQRNVF 561
>gi|302753328|ref|XP_002960088.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
gi|300171027|gb|EFJ37627.1| hypothetical protein SELMODRAFT_437235 [Selaginella moellendorffii]
Length = 657
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 47/379 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETG-LTADGIALLSSLQNLSVLDLGGL 61
L +LD+SRC V+DAG+ L + +LE+L LS +T D +A +L + L G
Sbjct: 256 LLKLDVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKFDHLQSIVLDGC 315
Query: 62 PVTD----LVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI 117
+ + R + L +L G V++RG A + G T L +
Sbjct: 316 EIARNGLPFIARGCKQLKELSLSKCRG--VTDRGIAAVAQ------------GCTALHKL 361
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER------EAFLYIETSLLSFL 171
+ C L++ ++ I +++ L + + + I E E +E +
Sbjct: 362 NLTCCRELTDASLCRI---SKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTEC 418
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAG 229
++S++ L ++++ AL L L S I D V + NLR L+ ++ AG
Sbjct: 419 NMSDTGLK---YISKCTALRSLKLGFCSTITDKGVAHIGARCCNLRELDFYRSKGIGDAG 475
Query: 230 VGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
V +A P L++L LS ++I D ++ +S + L+ + +++G + + + T L
Sbjct: 476 VAAIASGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRL-----ELRGCV--LVSSTGLA 528
Query: 289 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ + + L ++ +Q+ +A + LS F L + N S +S L SL +L
Sbjct: 529 VMASGCKRLTEIDIKRC--SQIGNAGVSALSFFCP--GLRMMNISYCPISKAGLLSLPRL 584
Query: 349 TNL-SIRDAVLTNSGLGSF 366
+ L S+R L N + F
Sbjct: 585 SCLQSVRLVHLKNVTVDCF 603
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 172/415 (41%), Gaps = 76/415 (18%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-------------------------- 37
L ++DLS C + D+ + L IS L+ L L+
Sbjct: 129 LTDVDLSYCSNLKDSDVLALAQISNLQALRLTGCHSITDIGLGCLAAGCKMLKLLTLKGC 188
Query: 38 -GLTADGIALLS-SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG-SQVSNRGAAV 94
G+T GIAL++ + + L LDL VTD L S+ L LE L+L + V + G
Sbjct: 189 LGITDIGIALVAVNCKQLRTLDLSYTEVTDEGLASIATLHSLEVLNLVSCNNVDDGGLRS 248
Query: 95 LKMFPRLSFLNLAWTGVTKLPNIS------------SLECLNLSNCTI--DSILEGNENK 140
LK R S L L V++ N+S SLE L LS C+I D +L +
Sbjct: 249 LKRSCR-SLLKL---DVSRCSNVSDAGLAALATSHLSLEQLTLSYCSIITDDLLATFQKF 304
Query: 141 APLAKISLAGTTFINEREAFLYIETSLLSFLDVSN---------SSLSRFCFLTQMKALE 191
L I L G F+ L L +S +++++ C AL
Sbjct: 305 DHLQSIVLDGCEIARNGLPFIARGCKQLKELSLSKCRGVTDRGIAAVAQGC-----TALH 359
Query: 192 HLDLSSSM-IGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
L+L+ + D S+ ++ L +L + S + + G+ L P LE L +
Sbjct: 360 KLNLTCCRELTDASLCRISKDCKGLESLKMESCSLITEDGLCGLGEGCPRLEELDFTECN 419
Query: 250 IDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQ 309
+ D + Y+S +L+ + + GF + TD ++ + N L L+ +++
Sbjct: 420 MSDTGLKYISKCTALRSLKL------GFCSTI---TDKGVAHIGARCCN-LRELDFYRSK 469
Query: 310 -VSDATLFPL-STFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
+ DA + + S +L L L S +TD SL LS L +L L +R VL +S
Sbjct: 470 GIGDAGVAAIASGCPKLKLLDLSYCSKITDCSLQSLSQLRELQRLELRGCVLVSS 524
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK LDLS C K+TD ++ L + L++L L G L+SS L+V+ G +
Sbjct: 486 LKLLDLSYCSKITDCSLQSLSQLRELQRLELR-------GCVLVSS-TGLAVMASGCKRL 537
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF-PRLSFLNLAWTGVTK-----LPNI 117
T++ ++ SQ+ N G + L F P L +N+++ ++K LP +
Sbjct: 538 TEIDIKRC-------------SQIGNAGVSALSFFCPGLRMMNISYCPISKAGLLSLPRL 584
Query: 118 SSLEC---LNLSNCTIDSILEGNENKAPLAKISL 148
S L+ ++L N T+D + +N L + L
Sbjct: 585 SCLQSVRLVHLKNVTVDCFVTVLQNCKSLKNVKL 618
>gi|213627601|gb|AAI71652.1| Hypothetical LOC559074 [Danio rerio]
Length = 604
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ + LE LDLS ++I VE + NLR L + N R VG+ +G L NL L
Sbjct: 78 FSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKILPVGVFSG-LSNLRRL 135
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHLER 302
+S +I L F+D + D+ Q E DLV +S A L L+
Sbjct: 136 DISENEI-------------LVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKE 182
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV------SLHQLSSL----------- 345
LN++++ ++ LS + L L LR +++ + LHQL +L
Sbjct: 183 LNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEML 242
Query: 346 --SKLTNLSIRDAVLTNSGLGS--FKPPRSLKLL 375
+ L L++ VLTN L + + P R L L
Sbjct: 243 NSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYL 276
>gi|423460691|ref|ZP_17437488.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
gi|401140744|gb|EJQ48300.1| hypothetical protein IEI_03831 [Bacillus cereus BAG5X2-1]
Length = 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 187 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 239
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 240 VTPLVKMDNLASLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 296
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 297 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK--- 345
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 346 ---------VKDLSGIDQMKQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 394
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 395 PLSNLVNLQKL 405
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 205 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLASLDLSNNKI 259
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 260 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 283
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 284 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 328
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 329 KPLYSLPLKDLVLTRNKV 346
>gi|218901747|ref|YP_002449581.1| internalin protein [Bacillus cereus AH820]
gi|218535468|gb|ACK87866.1| internalin protein [Bacillus cereus AH820]
Length = 1012
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 114 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 233 IKDVSGLEYMTNLENLTLEEVKLENIKFISNLRQLKSVSITYAELEDIGPLAELEHIESL 292
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+AG
Sbjct: 293 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISNAG-- 347
Query: 232 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L G L NL+ +S + + + +++ M L ++G + ++
Sbjct: 348 -LEGVHQLKNLKTFEISNNGLSN--VEHINGMNKL--------------IELGLSKNELV 390
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
LT L L+ L++LNLE+ +SD T PLS L L L + + DV
Sbjct: 391 DLTPLSKLSGLQKLNLEENFISDIT--PLSQLTSLYDLKLGSNEIRDV 436
>gi|421888173|ref|ZP_16319281.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
gi|378966462|emb|CCF96029.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum K60-1]
Length = 466
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 8/271 (2%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L LD+ R + DAG+ L L S G+ G+ L++ ++ LD+
Sbjct: 198 TLTALDIRRNA-IGDAGVAAFARNKKLTALNASSNGIGPAGVRALAANTTIATLDISDNE 256
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNI 117
+ D R+L T L LD S + G L L+ L+L++ G L
Sbjct: 257 IGDEGARALAGHTALTKLDASDSGIGPEGTRALATSMTLASLDLSYNEIGAEGAEALGEN 316
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
++L L++ + + + I A + + L+ L++SN+
Sbjct: 317 TTLTTLHVCGNALGHREAALLAASATLTTLDLSSNAIGSAGARAFGTNTTLTKLNLSNNG 376
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
+ R L LD+S++ IGD + +++A L LN S+ R AG LAG+
Sbjct: 377 IERVSAWANNSKLTKLDISNNRIGDAAAQVLADS-RTLTTLNASSNRIGDAGASALAGNT 435
Query: 238 PNLEILSLSGTQIDDYAISYMSMMPSLKFID 268
L L++S +I + + + +LK ++
Sbjct: 436 -TLATLNVSFNRIGEAGLLALEANTTLKKLE 465
>gi|319881517|gb|ADV75085.1| TLR2B [Oceanodroma leucorhoa]
Length = 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 166 SLLSFLDVSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 221
SLL+ + V N+ + C L+Q + +LE+LDLS++++GD S+E AC G +L+ LNLS
Sbjct: 97 SLLTKVTVENTKVFLVPCRLSQKLLSLEYLDLSANLLGDQSLEHSACQGGWPSLQTLNLS 156
Query: 222 NTRFSSAGVGILA-GHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQ 279
S + + + HL NL +L +S D I + P +LK++++S+T I
Sbjct: 157 QNSLSDLEMTVKSLSHLRNLILLDISQNNFGD--IPDVCEWPQTLKYLNLSSTQIPKLTT 214
Query: 280 QVGAETDLVLSLTA-------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
+ + VL ++A LQ L +L+ L L + Q+ L + L+ +S+R
Sbjct: 215 CIPPTLE-VLDVSANNLKEFGLQ-LPYLKELYLAKNQLK--ALPGAAPVPNLVAMSIRRN 270
Query: 333 SLTDVSLHQLSSLSKLTNLSIRD 355
L S + S K+ L D
Sbjct: 271 KLNGFSREEFESFRKMELLDASD 293
>gi|383847709|ref|XP_003699495.1| PREDICTED: slit homolog 2 protein-like [Megachile rotundata]
Length = 1401
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 167/407 (41%), Gaps = 74/407 (18%)
Query: 4 LKELDLS--RCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
L+ELDLS R ++ +K L LE L LSE L+ + L L VL+L
Sbjct: 672 LRELDLSGNRFIRFPTDYLKPL---QFLEMLDLSENALSRVDEFAFARLGRLRVLNLASN 728
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ + + T+L+ LDL + + L+ RL +L +T LP
Sbjct: 729 RIESVDDLAFHNSTQLQLLDLSANSIEALSERTLEGLLRLEHFDLRNNRLTSLP------ 782
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF-LYIETSLLSFLDVSNSSLSR 180
D+I + + + I L+G IN+ L ++ LS L+++ + + +
Sbjct: 783 ---------DTIFDPTRVRV-VESIDLSGNR-INQIPILSLRKQSGSLSSLNLARNKMVQ 831
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNL 240
L+HLDLS + + +++++ + LR+LNL+NT A ++ P L
Sbjct: 832 LFDQDVPSNLKHLDLSDNPLSENAIDRILGEAKILRSLNLANT----AVKRLVRLETPFL 887
Query: 241 EILSLSGTQIDD--------------------------YAISYMSMMPSLKFIDISNTDI 274
E L LSG + D +AI + +P L+++D+S +
Sbjct: 888 ERLDLSGNDLTDVPRDALERTTMLQTLDLSRNKFPDLNHAIGTLKTLPVLRWLDVSGNEA 947
Query: 275 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL-SLRNAS 333
K +++ T+ + L L LNL + + D T + FK L L SL +
Sbjct: 948 K------------IVNETSFEGLTALRFLNL--SDLPDCTRIEKNAFKPLTKLRSLSAYN 993
Query: 334 LTDVSLHQLSSLSKLTN------LSIRDAVLTNSGLGSFKPPRSLKL 374
+ L + K N + ++D+ ++N L PR KL
Sbjct: 994 YPKLGYFDLQGILKGMNRLETLDVEVKDSTVSNEQLSIRAHPRLTKL 1040
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|46447142|ref|YP_008507.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400783|emb|CAF24232.1| hypothetical protein pc1508 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 657
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 80/388 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG-GL 61
LK L L C +TD G+ HL + L+ L L + LT G+A LS L+NL L+L
Sbjct: 336 LKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHSK 395
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
T+ L L L L++L+L+G + NL G+T L ++ +L+
Sbjct: 396 HFTNAGLAHLSPLAALQHLNLFGCE------------------NLTGDGLTHLSSLVALQ 437
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRF 181
L L+ C N A LA ++ + ++ L+F D N + +
Sbjct: 438 HLGLNFCR-------NLTDAGLAHLA-----------PLVTLQHLDLNFCD--NLTDTGL 477
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
LT + L+HL+L RNL + AG+ L+ L NL+
Sbjct: 478 AHLTSLVTLQHLNLGWC-----------------RNL-------TDAGLVHLSP-LENLQ 512
Query: 242 ILSLSGT-QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS-LTALQNLNH 299
L L+ + D +++++ + +L+ ++ +++ TD L+ LT L L +
Sbjct: 513 HLDLNDCYNLTDAGLAHLTPLVALQHLN---------LRRCRKLTDAGLAHLTPLVALQY 563
Query: 300 LERLNLEQTQVSDATLFPLSTFKELIHLSLR-NASLTDVSLHQLSSLSKLTNLSIRDAV- 357
L+ ++DA L L+ L HL L +LTD L L+ L+ L L +
Sbjct: 564 LDLFGCR--NLTDAGLTHLTPLIALQHLYLGLCNNLTDRGLAHLTPLAVLQRLDLSFCSN 621
Query: 358 LTNSGLGSFKPPRSLKLLDLHGGWLLTE 385
LTN+GL P +LK LDL G LT+
Sbjct: 622 LTNAGLRHLSPLVALKYLDLSGCENLTD 649
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+ L+ LDL+ C +TD G+ HL S+ TL+ L L LT G+ LS L+NL LDL
Sbjct: 458 LVTLQHLDLNFCDNLTDTGLAHLTSLVTLQHLNLGWCRNLTDAGLVHLSPLENLQHLDLN 517
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGV 111
+TD L L L L++L+L ++++ G A L L +L NL G+
Sbjct: 518 DCYNLTDAGLAHLTPLVALQHLNLRRCRKLTDAGLAHLTPLVALQYLDLFGCRNLTDAGL 577
Query: 112 TKLPNISSLECLNLSNC 128
T L + +L+ L L C
Sbjct: 578 THLTPLIALQHLYLGLC 594
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 34/162 (20%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET----------------------- 37
+ L+ L L C +TDAG+ +L + L+ L LS +
Sbjct: 358 LVALQHLSLFDCENLTDAGLAYLSPLENLQHLNLSHSKHFTNAGLAHLSPLAALQHLNLF 417
Query: 38 ---GLTADGIALLSSLQNLSVLDLGGL-PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGA 92
LT DG+ LSSL L L L +TD L L L L++LDL + +++ G
Sbjct: 418 GCENLTGDGLTHLSSLVALQHLGLNFCRNLTDAGLAHLAPLVTLQHLDLNFCDNLTDTGL 477
Query: 93 AVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNC 128
A L L LNL W G+ L + +L+ L+L++C
Sbjct: 478 AHLTSLVTLQHLNLGWCRNLTDAGLVHLSPLENLQHLDLNDC 519
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 291 LTALQNLNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKL 348
L L+N +L+ L LE + ++D L LS L HLSL + +LTD L LS L L
Sbjct: 327 LLVLKNCKNLKALYLEGCKNLTDTGLAHLSPLVALQHLSLFDCENLTDAGLAYLSPLENL 386
Query: 349 TNLSIRDAV-LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAI 388
+L++ + TN+GL P +L+ L+L G LT D +
Sbjct: 387 QHLNLSHSKHFTNAGLAHLSPLAALQHLNLFGCENLTGDGL 427
>gi|104646999|gb|ABF74123.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DL RC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNIVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|428317664|ref|YP_007115546.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428241344|gb|AFZ07130.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 782
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 182/407 (44%), Gaps = 47/407 (11%)
Query: 25 SISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG 84
+++ L L+L G + IA LS+L NL+ L+L +TD+ L LT L YL+L
Sbjct: 73 ALTNLTALYLQ--GSQINDIASLSALTNLTYLNLESNQITDIT--PLSALTNLTYLNLNH 128
Query: 85 SQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE-----CLNLSNCTIDSILEGNEN 139
+Q+++ L L+ L+L + +T + +S+L CL + T + L G N
Sbjct: 129 NQITD--ITPLSGLTNLTILSLEYNQITDITGLSALTNLTDLCLGCNQITDITGLLGLTN 186
Query: 140 KAPLAKISLAGT--TFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
L ++SL T + A + L+ L + N ++ L+ + L L +S
Sbjct: 187 ---LTRVSLNNNEITDVTPLSAL-----TNLTKLGIENQEITDISPLSALTNLTELSISD 238
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNLEILSL--SGTQIDDY 253
+I + + NL L F S G+ ++ L NL LS+ + T +
Sbjct: 239 GIIDISPLSAL----TNLTEL------FISEGITDISPLSALTNLTKLSIIYNDTITEIS 288
Query: 254 AISYMSMMPSLKFIDISNTDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+S ++ + SL F+ TDI + + + + +TAL L +L LNL
Sbjct: 289 PLSALTNLTSLYFLYTQITDITALSALTNLTYLYLSDNQITDITALSALTNLTYLNLSNN 348
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 368
Q++D + LS L +L+L N +TD++ LS+L+ LT L + +T+ L
Sbjct: 349 QITD--IAALSALTNLTYLNLSNNQITDIT--ALSALTNLTELHLETNQITDLNLSI--- 401
Query: 369 PRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGS 415
+ K L L + + AI K++ I + ++C S Q+ S
Sbjct: 402 ELTQKYLTLSTTPIDSPTAIETAKKLYAAIGLEAPEVIVCSSPQVVS 448
>gi|290978509|ref|XP_002671978.1| predicted protein [Naegleria gruberi]
gi|284085551|gb|EFC39234.1| predicted protein [Naegleria gruberi]
Length = 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 15/232 (6%)
Query: 69 RSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNC 128
+S+ L L LD+ S++ N G + L+ LN+ + + I +L+ L +
Sbjct: 57 KSISDLKNLTTLDIGYSRIGNEGLESIGQLENLTRLNIRSNNIGLVEPIINLKTLTALDI 116
Query: 129 TIDSILEGNENKAPLAKISLAGTTF-----INEREAFLYIETSLLSFLDVSNSSLSR--F 181
+SI GNE ++K++ + F INE A E L+ LD++ S++
Sbjct: 117 GENSI--GNEGVKSISKLTELTSLFIDYDDINEEGAKYLCELPNLTILDLTGSNIGDEGA 174
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
F+ Q L+HL LS + I + V ++ + L +L LS G+ L+ L L
Sbjct: 175 KFIGQSTKLKHLFLSLADISNVGVNYLSSLNE-LVDLILSLNDIGDEGLKHLS-SLKMLN 232
Query: 242 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVL 289
L++SG QI D + ++ M +LK I I+N + + IQ++ TDL L
Sbjct: 233 YLNVSGNQITDEGVVFIREMENLKRISITNNLLTAVGENLIQEMSITTDLDL 284
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L+ L++ ++++ + +K L LD+ + IG++ V+ ++ + L +L + +
Sbjct: 89 LTRLNIRSNNIGLVEPIINLKTLTALDIGENSIGNEGVKSISKL-TELTSLFIDYDDINE 147
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G L LPNL IL L+G+ I D ++ LK + +S DI VG
Sbjct: 148 EGAKYLC-ELPNLTILDLTGSNIGDEGAKFIGQSTKLKHLFLSLADI----SNVG----- 197
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ L +LN L L L + D L LS+ K L +L++ +TD + + +
Sbjct: 198 ---VNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVSGNQITDEGVVFIREMEN 254
Query: 348 LTNLSIRDAVLTNSG 362
L +SI + +LT G
Sbjct: 255 LKRISITNNLLTAVG 269
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ + G+K + ++ L L++ + +G L L NL++LDL G + D + +
Sbjct: 121 IGNEGVKSISKLTELTSLFIDYDDINEEGAKYLCELPNLTILDLTGSNIGDEGAKFIGQS 180
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLS--FLNLAWTGVTKLPNISSLECLNLSNCTIDS 132
TKL++L L + +SN G L L L+L G L ++SSL+ LN N +
Sbjct: 181 TKLKHLFLSLADISNVGVNYLSSLNELVDLILSLNDIGDEGLKHLSSLKMLNYLNVS--- 237
Query: 133 ILEGNENKAPLAKISLAGTTFINERE 158
GN+ I+ G FI E E
Sbjct: 238 ---GNQ-------ITDEGVVFIREME 253
>gi|195589250|ref|XP_002084368.1| GD12868 [Drosophila simulans]
gi|194196377|gb|EDX09953.1| GD12868 [Drosophila simulans]
Length = 534
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 152/356 (42%), Gaps = 38/356 (10%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPR------ 100
LS L L + + GG+ + D + LQ L+ L+L +Q+ + + FP
Sbjct: 73 LSRLLELDLSESGGVTLGD---KGLQDFKALQKLNLTHAQLDELKS---EQFPNPSEIIN 126
Query: 101 --LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
+S+ ++ + ++LE N S I +++E N K + K+ T N +E
Sbjct: 127 FDVSYNDILAISTKLMSGFANLEYANFSENLI-AVIEPNAFKH-MKKLRFLDLT-TNYQE 183
Query: 159 AFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACVGANL 215
E + L FL +SN++L F C + LE L L S+ + + ++M + NL
Sbjct: 184 NITLGENANLRFLSISNNNLRDFQWCHFRGLPKLEELHLHSNWL--EHLDMGIFYALPNL 241
Query: 216 RNLNLSNTR-FSSAGVGILA-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKFI--D 268
R LN+SN F +A G + L++L S + DD + + +L
Sbjct: 242 RVLNVSNNNLFEIKRTLFMAPGEVAPLDLLDYSSNNVKVLDDSVFCRLKKLRTLNLWLNQ 301
Query: 269 ISNTDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL--FPLS 319
I+ + F+ + VL NL LE+L+L + + L F
Sbjct: 302 INRIHPRAFLGLSSLQTLHLQGNKISVLPDDVFANLTALEKLDLSKNNIKKLGLRVFGER 361
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
++LI+L L N + D+ LSS+ + L +R L + L F P R L+LL
Sbjct: 362 ILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLL 417
>gi|15896525|ref|NP_349874.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738484|ref|YP_004637931.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459994|ref|YP_005672414.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026357|gb|AAK81214.1|AE007824_3 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510683|gb|ADZ22319.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336293297|gb|AEI34431.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 849
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 23/195 (11%)
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
S L+ LD+SN++LS FL+ + L++L+LSS+ I D + ++ + NL L+LS +
Sbjct: 598 SNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIAD--ISALSNL-TNLNQLDLSTNQI 654
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-SNT--DI---KGF-- 277
S+ +L L IL+L+ +I+D IS ++ + L+ + + SNT DI K F
Sbjct: 655 SNISS---LNNLIGLNILNLNSNKIND--ISSLTNLKQLQTLSLNSNTIQDIDVLKNFTV 709
Query: 278 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
+ +G + + ++ L NLN L+ ++L Q+++ + T + +H L N + D+
Sbjct: 710 LNVLGLSNNKITDISTLANLNSLKNISLSNNQITNISCLCNLTNAQYLH--LENNQINDI 767
Query: 338 SLHQLSSLSKLTNLS 352
S+L+KL NL+
Sbjct: 768 -----SALNKLKNLA 777
>gi|423392277|ref|ZP_17369503.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
gi|401634924|gb|EJS52686.1| hypothetical protein ICG_04125 [Bacillus cereus BAG1X1-3]
Length = 760
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 40/295 (13%)
Query: 61 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 111
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 220 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 279
Query: 112 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 280 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 333
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 334 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 384
Query: 230 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 279
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 385 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 442
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++ E + + L+ NLN L L+ ++ D P+ + +++++N +
Sbjct: 443 KLDLEANYISDLSPASNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 495
>gi|255581263|ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
gi|223528936|gb|EEF30930.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis]
Length = 912
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 184/407 (45%), Gaps = 50/407 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA--DGIALLSSLQNLSVLDLGGL 61
L+EL L + +++ ++ ++ + +++L+ L LS GLT + L L +L VLD+
Sbjct: 179 LEELYLDK-IELENSFLQTVGVMTSLKVLSLSGCGLTGALPNVQGLCELIHLRVLDVSSN 237
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQ----VSNRGAAVLKMFPRLSFLNLAWT---GVTKL 114
++ L LT L+ LDL +Q +SN +LK L N + +
Sbjct: 238 EFHGILPWCLSNLTSLQLLDLSSNQFVGDISNSPLKILKSLVDLDVSNNHFQVPFSLGPF 297
Query: 115 PNISSLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLSFL 171
N S+L+ + N I LE + AP L I +G FLY + +L F+
Sbjct: 298 FNHSNLKHIRGQNNAI--YLEAELHSAPRFQLISIIFSGYGICGTFPNFLYHQNNL-QFV 354
Query: 172 DVSNSSL-SRF--CFLTQMKALEHLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
D+S+ SL F LT LE LDL ++S+ G + + V NL L++SN
Sbjct: 355 DLSHLSLKGEFPNWLLTNNTRLEILDLVNNSLSGHLQLPLHPHV--NLLALDISNNHVHD 412
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--- 284
+ LP LE+L++S D S M SL+ +D+SN + G I + A
Sbjct: 413 HIPLEIGTFLPKLELLNMSSNGFDGSIPSSFGNMNSLRILDLSNNQLSGSIPEHLATGCF 472
Query: 285 --TDLVLSLTALQ--------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
L+LS +LQ NL +L L L++ S P S LS S+
Sbjct: 473 SLNTLILSNNSLQGQMFSKQFNLTNLWWLELDKNHFSGRI--PKS-------LSKSALSI 523
Query: 335 TDVSLHQLSSL--SKLTNLS-IRDAVLTNSGLGSFKPPRSLKLLDLH 378
D+S + LS + + NLS +++ +L+N+ L K P ++ LH
Sbjct: 524 MDLSDNHLSGMIPGWIGNLSYLQNLILSNNRL---KGPIPVEFCQLH 567
>gi|161333858|ref|NP_796050.2| F-box/LRR-repeat protein 13 isoform b [Mus musculus]
gi|61213702|sp|Q8CDU4.2|FXL13_MOUSE RecName: Full=F-box/LRR-repeat protein 13; AltName: Full=F-box and
leucine-rich repeat protein 13
Length = 790
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 72/258 (27%)
Query: 7 LDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 61
L+L+ C+++ D G+KH + L +L L+ L D I L NL L+L
Sbjct: 507 LNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNC 566
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TDL + + + L +DL G+ +SN G +L KL +S
Sbjct: 567 EHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVS 613
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+C+N+++ I + Y +TSLL
Sbjct: 614 DCVNITDFGIRA-----------------------------YCKTSLL------------ 632
Query: 181 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLP 238
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+
Sbjct: 633 ---------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCH 683
Query: 239 NLEILSLSGT-QIDDYAI 255
L IL +SG Q+ D I
Sbjct: 684 YLHILDISGCIQLTDQII 701
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 331 LQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRYFHNLQNLSLAYC 390
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
TD L+ L + KL YLDL G +++ PR+S + L + P
Sbjct: 391 RKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QVLVEKCPRISSVVLIGS-----P 438
Query: 116 NISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+IS LS+C + I EGN+ +IS A I+ Y + + +D
Sbjct: 439 HISDSAFKALSSCDLKKIRFEGNK------RISDACFKSIDRN----YPGINHIYMVDCK 488
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSNTR-FSSAGV 230
+ S L+ +K L L+L++ + IGD ++ LR LNL+N + V
Sbjct: 489 GLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSV 548
Query: 231 GILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 272
L+ PNL L+L + + D AI Y++ M SL +D+S T
Sbjct: 549 IRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGT 591
>gi|170037242|ref|XP_001846468.1| leucine-rich repeat-containing protein 1 [Culex quinquefasciatus]
gi|167880302|gb|EDS43685.1| leucine-rich repeat-containing protein 1 [Culex quinquefasciatus]
Length = 831
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+ LE L+LS + + LL+ L L L+L G+ +T L + L LE LDL +
Sbjct: 473 LEDLESLFLSNNPVGTLDVKLLTKLPRLEALELAGMALTTLPIGIFDNLADLEELDLGYN 532
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWTGVTKL-PNI-SSLECLNLSNCTIDSILEGNE----- 138
Q+ + + + L L LA G+ L P + L LN ID L GNE
Sbjct: 533 QLKTLDSYIFRNLFSLETLLLAENGIESLSPELFYGLRNLN----EID--LSGNELTTLE 586
Query: 139 -----NKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL----------SRFCF 183
N L K+ +A F+ + +LL LD+S++ L S F
Sbjct: 587 THVFRNCLNLEKLDIASNKFVTFNLPQMSFAKTLLD-LDISDNMLTTITVTEDLESLFAN 645
Query: 184 LTQMKALEHL-----DLSSSMIGDDSVEMVACV--GANLRNLNLSNTRFSSAGVGILAGH 236
Q+ LE + DL+ + ++ + V+ + +L LN+S F+ +G L G
Sbjct: 646 DNQITGLESVASPSHDLTMLSLANNRLSDVSTILMFTDLEYLNISRNNFNQLDLGRLTGS 705
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L LE+L++S I ++ S+K +D+S+ ++
Sbjct: 706 LDELEVLNVSHCGISSLGNPNIANQESMKVLDLSHNEL 743
>gi|423667107|ref|ZP_17642136.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|423676859|ref|ZP_17651798.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
gi|401304551|gb|EJS10103.1| hypothetical protein IKO_00804 [Bacillus cereus VDM034]
gi|401307120|gb|EJS12577.1| hypothetical protein IKS_04402 [Bacillus cereus VDM062]
Length = 760
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L +++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKEIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|290980460|ref|XP_002672950.1| predicted protein [Naegleria gruberi]
gi|284086530|gb|EFC40206.1| predicted protein [Naegleria gruberi]
Length = 331
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L FL + + F+++MK L LD+S + I + ++++ + L +LN++
Sbjct: 112 LKFLGYLLGGIEKLKFISEMKQLISLDISYNRIDGEGAKLISEM-KQLTSLNINGNVIGG 170
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
G ++G + L L + +I Y+S M L +DI Q+G E
Sbjct: 171 EGAKFISG-MKQLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGN-------QIGDEEVK 222
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
++S + L LN+ + DA + K+L L++ + D ++ + +
Sbjct: 223 LIS-----EMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGAKYINEMKQ 277
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
LT+L+I + N+G + L LD+ G + E A
Sbjct: 278 LTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGA 317
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+++MK L L+++ ++IG + + ++ + L +L + N R G ++ + L L
Sbjct: 152 ISEMKQLTSLNINGNVIGGEGAKFISGM-KQLTSLYIYNNRIGGEGAKYIS-EMKQLISL 209
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLSLTAL----- 294
+ G QI D + +S M L ++I+N I FI + T L +S +
Sbjct: 210 DIGGNQIGDEEVKLISEMKQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVIGDEGA 269
Query: 295 ---QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L LN+ + ++ +A +S K+L L + + +S + +L +L
Sbjct: 270 KYINEMKQLTSLNITRNEIGNAGAKFISEMKQLTSLDIAGNRIGGEGAKFISEMKQLISL 329
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ G K + + L L++ + +G +S ++ L LD+GG + D ++ + +
Sbjct: 168 IGGEGAKFISGMKQLTSLYIYNNRIGGEGAKYISEMKQLISLDIGGNQIGDEEVKLISEM 227
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSIL 134
+L L++ + + + GA + +L+ LN+++ +
Sbjct: 228 KQLTSLNIANNVIGDAGAKFIGDMKQLTSLNISYNVI----------------------- 264
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSL-LSFLDVSNSSLSRFCFLTQMKALEHL 193
G+E G +INE + TSL ++ ++ N+ F+++MK L L
Sbjct: 265 -GDE-----------GAKYINEMKQL----TSLNITRNEIGNAGAK---FISEMKQLTSL 305
Query: 194 DLSSSMIGDDSVEMVA 209
D++ + IG + + ++
Sbjct: 306 DIAGNRIGGEGAKFIS 321
>gi|26325522|dbj|BAC26515.1| unnamed protein product [Mus musculus]
Length = 745
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 72/258 (27%)
Query: 7 LDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 61
L+L+ C+++ D G+KH + L +L L+ L D I L NL L+L
Sbjct: 462 LNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNC 521
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TDL + + + L +DL G+ +SN G +L KL +S
Sbjct: 522 EHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVS 568
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+C+N+++ I + Y +TSLL
Sbjct: 569 DCVNITDFGIRA-----------------------------YCKTSLL------------ 587
Query: 181 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLP 238
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+
Sbjct: 588 ---------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCH 638
Query: 239 NLEILSLSGT-QIDDYAI 255
L IL +SG Q+ D I
Sbjct: 639 YLHILDISGCIQLTDQII 656
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 286 LQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPKYFHNLQNLSLAYC 345
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
TD L+ L + KL YLDL G +++ PR+S + L + P
Sbjct: 346 EKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QVLVEKCPRISSVVLIGS-----P 393
Query: 116 NISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+IS LS+C + I EGN+ +IS A I+ Y + + +D
Sbjct: 394 HISDSAFKALSSCDLKKIRFEGNK------RISDACFKSIDRN----YPGINHIYMVDCK 443
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSNTR-FSSAGV 230
+ S L+ +K L L+L++ + IGD ++ LR LNL+N + V
Sbjct: 444 GLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSV 503
Query: 231 GILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 272
L+ PNL L+L + + D AI Y++ M SL +D+S T
Sbjct: 504 IRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGT 546
>gi|290985427|ref|XP_002675427.1| predicted protein [Naegleria gruberi]
gi|284089023|gb|EFC42683.1| predicted protein [Naegleria gruberi]
Length = 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 33/260 (12%)
Query: 12 CVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
C ++ G K+L + L L + E + +G L+S + L+ L++G + + +
Sbjct: 82 CNRIGVEGAKYLSEMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIGGEGAKFI 141
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLS 126
+ +L LD+ + + GA + +L+ LN++ G + + L LN+S
Sbjct: 142 SEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNIS 201
Query: 127 NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FL 184
N I G E G I+E + L+ LD+SN+ + +
Sbjct: 202 NNQI-----GGE-----------GVKLISEMKQ--------LTSLDISNNQIGDEGAKLI 237
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
++MK L L++S + IGD+ + ++ + L++L++S + G +++ + L L+
Sbjct: 238 SEMKQLTSLNISGNRIGDEGAKSMSEM-KQLKSLDISYNQIGDEGTKLIS-EMKQLISLN 295
Query: 245 LSGTQIDDYAISYMSMMPSL 264
+ +I D + Y+ M L
Sbjct: 296 IRANRIGDEGVKYIREMKQL 315
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 16/242 (6%)
Query: 150 GTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEM 207
G I + EA L E L+ L++S++ + +++MK L L++ + IG + +
Sbjct: 33 GKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNICCNRIGVEGAKY 92
Query: 208 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
++ + L +LN+ G +++ L L++ TQI ++S M L +
Sbjct: 93 LSEM-KQLISLNICENEIGDEGAKLIS-ETRQLTSLNIGFTQIGGEGAKFISEMKQLTSL 150
Query: 268 DISNT--DIKG--FIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATL 315
DIS+ ++G FI ++ T L +S + + L LN+ Q+ +
Sbjct: 151 DISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQLTSLNISNNQIGGEGV 210
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
+S K+L L + N + D +S + +LT+L+I + + G S + LK L
Sbjct: 211 KLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIGDEGAKSMSEMKQLKSL 270
Query: 376 DL 377
D+
Sbjct: 271 DI 272
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 31/322 (9%)
Query: 158 EAFLYIETSLLSFLDVSNSSLS--RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 215
EA L E L L++ + + +++MK L L++S ++IGD+ ++++ + L
Sbjct: 17 EAKLISEMKQLISLNIGKNEIGDEEAKLISEMKQLTSLNISDNLIGDEGAKLISEM-KQL 75
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
+LN+ R G L+ + L L++ +I D +S L ++I T I
Sbjct: 76 TSLNICCNRIGVEGAKYLS-EMKQLISLNICENEIGDEGAKLISETRQLTSLNIGFTQIG 134
Query: 276 G----FIQQVGAETDLVLS--LTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
G FI ++ T L +S L ++ + L LN+ + D +S K+
Sbjct: 135 GEGAKFISEMKQLTSLDISDNLIGVEGAKFISEMKQLTSLNISDNLIGDEGAKLISEMKQ 194
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 383
L L++ N + + +S + +LT+L I + + + G + L L++ G +
Sbjct: 195 LTSLNISNNQIGGEGVKLISEMKQLTSLDISNNQIGDEGAKLISEMKQLTSLNISGNRIG 254
Query: 384 TEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSF 443
E A K ++ L + +QIG G S +KQ ++
Sbjct: 255 DEGA-----KSMSEMKQLKSLDI--SYNQIGDEGTKL------ISEMKQLISLNIRANRI 301
Query: 444 LDQRLKYSRE--ELLELQYSSL 463
D+ +KY RE +L L Y L
Sbjct: 302 GDEGVKYIREMKQLTSLTYKGL 323
>gi|229022889|ref|ZP_04179409.1| Internalin [Bacillus cereus AH1272]
gi|228738424|gb|EEL88900.1| Internalin [Bacillus cereus AH1272]
Length = 760
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKLTDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 -LHQLSSLSKL 348
L L +L KL
Sbjct: 434 PLSNLVNLQKL 444
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ L+ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L G + N++ L LSG QI+D
Sbjct: 299 TN--VAPLIG-MKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 61 LPVTDLVLRSLQVL--TKLEYL-DLWGSQVSNRGAAVLKMFPRLSFLN-LAWTG-----V 111
L V DL L + ++L + L+Y+ +L V+N F L LN LA G V
Sbjct: 220 LQVKDLFLNTNEILDYSALKYMPNLKSLTVANAKLTDPSFFANLKQLNHLALRGNEFSDV 279
Query: 112 TKLPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
T L + +LE L+LSN I ++ L G +N + + L+G I + A +E L
Sbjct: 280 TPLVKMDNLESLDLSNNKITNVAPLIGMKN---VKSLYLSGNQ-IEDVTALAKMEQ--LD 333
Query: 170 FLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
+L+++N+ ++ L+ +K + +L L+ + I D + L++L L+ +
Sbjct: 334 YLNLANNKITNVAPLSALKNVTYLTLAGNQIED----IKPLYSLPLKDLVLTRNK----- 384
Query: 230 VGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 279
V L+G + L L + QI+D ++ ++ M L +D+ N ++K +Q
Sbjct: 385 VKDLSGIDQMNQLNKLFIGKNQIED--VTPLAKMTQLTELDLPNNELKDITPLSNLVNLQ 442
Query: 280 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++ E + + L+ + NLN L L+ ++ D P+ + +++++N +
Sbjct: 443 KLDLEANYITDLSPVSNLNKLVYLSFVANEIRDVR--PVIELSKKAYINVQNQKV 495
>gi|195378686|ref|XP_002048114.1| GJ13783 [Drosophila virilis]
gi|194155272|gb|EDW70456.1| GJ13783 [Drosophila virilis]
Length = 1556
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 26/348 (7%)
Query: 45 ALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFL 104
ALL +L L LD+ G +++L +L+ LE L L +Q+ L P L L
Sbjct: 352 ALLDALPTLRFLDMSGNLLSELPYGALRGHGTLEQLHLNNNQLRLIERDALMAMPALREL 411
Query: 105 NLAWTGVT-KLP----NISSLECLNLSN---CTIDSILEGNENKAPLAKISLAGTTFINE 156
+ ++ +LP N+ L+ L+L+ +DS L +S G T +
Sbjct: 412 RMRNNSLSSELPLPFWNLPGLKGLDLAQNQFVRVDSQLLAGLPSLRRLDLSENGLTDL-- 469
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
A + SLL L++S++ LS T M ++ +S + ++ + +
Sbjct: 470 -AANTFRHNSLLETLNISSNELSHIHPGTFMHLERLFEVDASF--NQLSAIIPGLPQIVE 526
Query: 217 NLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK 275
++L R ++ G + LPNL +L LS QI+ A P L+ + ++ ++
Sbjct: 527 RISLRGNRIAALPAAGSKSLQLPNLRMLDLSQNQIEQLARHGFQAAPQLRVLSLAQNQLR 586
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLT 335
+L T+ + LE L+L+ Q+ A L EL +L+L++ L
Sbjct: 587 ------------LLEDTSFIGIQRLELLHLQDNQLGQADERALLPLAELRNLNLQSNKLE 634
Query: 336 DVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 383
++ + S+ S+L L + ++ + +F RSL+ LDL G LL
Sbjct: 635 SITDNFFSNNSRLEQLDLSRNLIRSISPTAFDNQRSLEYLDLSGNALL 682
>gi|335427390|ref|ZP_08554321.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334895063|gb|EGM33243.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1451
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 95/370 (25%), Positives = 159/370 (42%), Gaps = 70/370 (18%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL----------------QNLSVLDL 58
V DAG+K + L+ ++++E +T + L+SL NL+ +DL
Sbjct: 1013 VEDAGLKQ----AILDDMYITEGPVTTEMAESLTSLYAGFYYIRSVEGLQYFTNLTKIDL 1068
Query: 59 GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV-LKMFPRLSFLNLAWTGVTKLPNI 117
++D+ L+ L LE ++L + S+ + +K L N T ++ L N+
Sbjct: 1069 LYNDISDIT--PLENLPLLEDINLNNNNFSDLSSLQNIKTLKNLWLENNNITDLSVLANL 1126
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
S+L+ L LSN + S L N A L + L+ E F + L+ L +S +
Sbjct: 1127 SNLDSLYLSNNQV-SDLTPLINLANLQNVYLSNNQVTTLPENFSNMLN--LNGLHLSGNQ 1183
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
++ L+ AL LDLS++ I D L N +L FS
Sbjct: 1184 ITDVTPLSTAPALIELDLSNNQITD------------LTNYDLLTYLFS----------- 1220
Query: 238 PNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGF-----IQQVGAETDLVLSL 291
L+L+ I D ++ ++ + SL+ + +D+ + + AE + + L
Sbjct: 1221 -----LNLNDNSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTNLTHLYAENNAISDL 1275
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
T L NLN + L L Q+SD T LS+ +L +L + N +TD LS L NL
Sbjct: 1276 TPLTNLNKIWYLVLNGNQISDLT--ALSSLTDLSYLRMNNNQITD--------LSPLQNL 1325
Query: 352 SIRDAVLTNS 361
+ D L N+
Sbjct: 1326 RLSDLQLNNN 1335
Score = 44.3 bits (103), Expect = 0.14, Method: Composition-based stats.
Identities = 87/359 (24%), Positives = 155/359 (43%), Gaps = 65/359 (18%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLV------------ 67
+ L +I TL+ LWL +T +++L++L NL L L V+DL
Sbjct: 1098 LSSLQNIKTLKNLWLENNNIT--DLSVLANLSNLDSLYLSNNQVSDLTPLINLANLQNVY 1155
Query: 68 LRSLQVLT---------KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN-- 116
L + QV T L L L G+Q+++ L P L L+L+ +T L N
Sbjct: 1156 LSNNQVTTLPENFSNMLNLNGLHLSGNQITD--VTPLSTAPALIELDLSNNQITDLTNYD 1213
Query: 117 -ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET---SLLSFLD 172
++ L LNL++ +I + PLA ++ + +N + + L+ L
Sbjct: 1214 LLTYLFSLNLNDNSISDL-------TPLANLTKLSSLRLNNNQISDLTPLGGLTNLTHLY 1266
Query: 173 VSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
N+++S LT + + +L L+ + I D + +L L ++N + +
Sbjct: 1267 AENNAISDLTPLTNLNKIWYLVLNGNQISDLTALSSL---TDLSYLRMNNNQITD----- 1318
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
L L+ L LS Q+++ IS +S + + +T I + +D+ +
Sbjct: 1319 ----LSPLQNLRLSDLQLNNNLISDLSYLAN-------STSISKLLLNNNQISDI----S 1363
Query: 293 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ N L L L+ +SD + T EL++ LRN ++DV+ L+SL+ L L
Sbjct: 1364 VISNFTGLRTLELDDNMISDLSALSSQTNLELLY--LRNNLISDVT--PLTSLTTLWRL 1418
>gi|219519351|gb|AAI45293.1| F-box and leucine-rich repeat protein 13 [Mus musculus]
Length = 745
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 72/258 (27%)
Query: 7 LDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 61
L+L+ C+++ D G+KH + L +L L+ L D I L NL L+L
Sbjct: 462 LNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNC 521
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TDL + + + L +DL G+ +SN G +L KL +S
Sbjct: 522 EHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVS 568
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+C+N+++ I + Y +TSLL
Sbjct: 569 DCVNITDFGIRA-----------------------------YCKTSLL------------ 587
Query: 181 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLP 238
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+
Sbjct: 588 ---------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCH 638
Query: 239 NLEILSLSGT-QIDDYAI 255
L IL +SG Q+ D I
Sbjct: 639 YLHILDISGCIQLTDQII 656
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 286 LQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRYFHNLQNLSLAYC 345
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
TD L+ L + KL YLDL G +++ PR+S + L + P
Sbjct: 346 RKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QVLVEKCPRISSVVLIGS-----P 393
Query: 116 NISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+IS LS+C + I EGN+ +IS A I+ Y + + +D
Sbjct: 394 HISDSAFKALSSCDLKKIRFEGNK------RISDACFKSIDRN----YPGINHIYMVDCK 443
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSNTR-FSSAGV 230
+ S L+ +K L L+L++ + IGD ++ LR LNL+N + V
Sbjct: 444 GLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSV 503
Query: 231 GILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 272
L+ PNL L+L + + D AI Y++ M SL +D+S T
Sbjct: 504 IRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGT 546
>gi|72386459|ref|XP_843654.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|62360673|gb|AAX81083.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei]
gi|70800186|gb|AAZ10095.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 706
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L L+LS + G+ + LPN+ LSL GT +D I +S L +D S
Sbjct: 218 LEELSLSGCKNIKKGLEHICA-LPNVRKLSLRGTAANDACILSLSGSTHLADLDCSECMN 276
Query: 275 KGFIQQVGAETDL-VLSLTALQNLN----------HLERLNLEQTQVSDATLFPLSTFKE 323
I+ +G + L VLSL N+ +L LNL T + D + +STFK+
Sbjct: 277 ISDIKALGKISPLEVLSLEKCINMKEGLEELAAIPNLRELNLASTCIDDECVIKVSTFKQ 336
Query: 324 LIHLSLRNA-SLTDVSLHQLSSLSKLTNLSI 353
L+HL+ N ++TD+ L+ + L LSI
Sbjct: 337 LVHLNCENCLAVTDI--QPLAKMKTLEYLSI 365
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 36/281 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLP 62
L+ L L +C+ + + G++ L +I L +L L+ T + + + +S+ + L L+ L
Sbjct: 289 LEVLSLEKCINMKE-GLEELAAIPNLRELNLASTCIDDECVIKVSTFKQLVHLNCENCLA 347
Query: 63 VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNI 117
VTD+ + L + LEYL + GS+ G + P+L+ LNL V L
Sbjct: 348 VTDI--QPLAKMKTLEYLSIGGSRNIEVGVRQVCGNPKLTGLNLGGVVVRDVDVMFLREF 405
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS- 176
LNLS C L + L + L G N ++ L E ++ LD +
Sbjct: 406 EGFVTLNLSGCARMKGLYALDGCTRLRTLILRGCK--NVKDITLLRECKDITTLDFTGCI 463
Query: 177 SLS-----RFCF------LTQMKALEHLDLSSSMIGDDSVEMVACV----------GANL 215
SLS R C L++ L+HL +VEM+ C NL
Sbjct: 464 SLSDLRPLRNCGSLKMLNLSECARLKHLTGVEECKKLATVEMIDCKTLEDISALRGCTNL 523
Query: 216 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSG-TQIDDYAI 255
LNL N + + +L G NL+ L L+G ++IDD+++
Sbjct: 524 ETLNLCNC-GGNPDLSVL-GACKNLKTLRLTGSSKIDDFSM 562
>gi|290971190|ref|XP_002668408.1| predicted protein [Naegleria gruberi]
gi|284081802|gb|EFC35664.1| predicted protein [Naegleria gruberi]
Length = 286
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S R F+++MK L LD+S ++IG + + ++ + L +LN+ + S G ++
Sbjct: 122 SRERVKFISEMKQLTSLDISHNLIGYEGAKYISEM-KQLTSLNIYYNQISDKGAKYIS-E 179
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
+ L +L++ +I D Y+S M L +++SN +I+ GA+ +
Sbjct: 180 MKQLILLNIGSNRIGDEGAKYISEMKQLTSLNVSNNEIR----DEGAK--------FISE 227
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L LN+ + ++S +S K+LI L++ + ++D +S + +LT+L
Sbjct: 228 MKQLTSLNVYKNRISVEGAKYISEMKQLILLNIGSNRISDEGAKYISEMKQLTSL 282
>gi|195341377|ref|XP_002037286.1| GM12844 [Drosophila sechellia]
gi|194131402|gb|EDW53445.1| GM12844 [Drosophila sechellia]
Length = 1224
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 178/418 (42%), Gaps = 49/418 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ +DLSRC + L + L+ ++L++ L +L N+S +DL +
Sbjct: 378 LQVIDLSRC-NIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSHNRI 436
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVS-------NRGAAV-----------------LKMFP 99
+ + + KL+ LDL G+Q+S N G + ++ P
Sbjct: 437 GSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHP 496
Query: 100 RLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
RL + A + P + LE ++LS+ + +I E + + P ++ L +
Sbjct: 497 RLREIRAANNKFSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQL 556
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVG 212
+ + ++ L LD++N++L R T + LE L+L + + + S +
Sbjct: 557 DMVSEMAFHNSTQLQILDLANNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFERTK 616
Query: 213 AN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID--- 268
L N+NL++ RF A + L + + LS +I + S+M ++K ID
Sbjct: 617 LQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELP-GDDSIMVNIKRIDLSF 675
Query: 269 --ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER-----LNLEQTQVSDAT--LFPLS 319
+S+ + + + +L L+ T ++NL LE LNL ++ + +F
Sbjct: 676 NPLSSKAVHNVLNEPKTVRELSLAGTGIENLELLETPFLQFLNLSHNKLKNVKPEVFQRV 735
Query: 320 TFKELIHLSLRN-ASLTDVSLH--QLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
T E + LS SL D+S+ QL L L + +++ S G + RSL+L
Sbjct: 736 TLLETLDLSSNQLESLEDLSMAWPQLQVLQSLDVSNNSFEIVSQSNFGKLEMLRSLRL 793
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 150/353 (42%), Gaps = 66/353 (18%)
Query: 1 MTCLKELDLSRCVKV-----TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSV 55
+ L++LDLS T AG++ STL L LS+ LT G A L L
Sbjct: 279 LQSLQKLDLSENFFAVINADTFAGLE-----STLMALKLSQNRLTGLGGAPWV-LPELRS 332
Query: 56 LDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-- 113
LDL G +T+L + L L+ L+L G+ ++ A+ K RL ++L+ + +
Sbjct: 333 LDLSGNTLTELPSTIFEELENLQSLNLSGNHLTPLTGALFKPLDRLQVIDLSRCNIRQIS 392
Query: 114 ---LPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLS 169
L + L+ + L++ + + +G+ N ++ I L+ + R ++ L
Sbjct: 393 GDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSHNRIGSIRSG-AFVNVMKLQ 451
Query: 170 FLDVSNSSLSRFC--FLTQMKALEHLDLSS---SMIGDDSVEMVACVGANLRNLNLSNTR 224
LD+ + LS F + +E LD+S S + S + LR + +N +
Sbjct: 452 KLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFR----IHPRLREIRAANNK 507
Query: 225 FSSAGVGILA-----------------------GHLPNLEILSLSGTQIDDYAISYMSMM 261
FS +++ LP L +L ++ Q+D +S M+
Sbjct: 508 FSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLD--MVSEMAFH 565
Query: 262 PS--LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
S L+ +D++N + + ++G T + L LE+LNLE ++S+
Sbjct: 566 NSTQLQILDLANNN----LDRIGERT--------FEGLVRLEQLNLEGNRLSE 606
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 136/321 (42%), Gaps = 25/321 (7%)
Query: 71 LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNL 125
L VL L LDL G+++ +LK L + +T +P S+L L+L
Sbjct: 156 LHVLKNLRILDLSGNKIKLIEEGLLKGCVDLKEFYIDRNSLTSVPTNSLNGPSALRHLSL 215
Query: 126 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--F 183
I S+L + N +I I ++ + + + ++ + +S
Sbjct: 216 RQNQIGSLLADSFNAQRQLEIIDLRHNVIRSIDSLAFKGLQKIREIKLAGNRISHLNSDV 275
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++++L+ LDLS + + + A + + L L LS R + G+G LP L L
Sbjct: 276 FEKLQSLQKLDLSENFFAVINADTFAGLESTLMALKLSQNRLT--GLGGAPWVLPELRSL 333
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTA--LQNLNHLE 301
LSG + + +PS F ++ N +Q + + + LT + L+ L+
Sbjct: 334 DLSGNTLTE--------LPSTIFEELEN------LQSLNLSGNHLTPLTGALFKPLDRLQ 379
Query: 302 RLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS 361
++L + + + L+ ++L H+ L + L ++ +L ++++ + + +
Sbjct: 380 VIDLSRCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSHNRIGSI 439
Query: 362 GLGSFKPPRSLKLLDLHGGWL 382
G+F L+ LDLHG L
Sbjct: 440 RSGAFVNVMKLQKLDLHGNQL 460
>gi|423637920|ref|ZP_17613573.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
gi|401272722|gb|EJR78713.1| hypothetical protein IK7_04329 [Bacillus cereus VD156]
Length = 760
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|404449942|ref|ZP_11014929.1| putative internalin A [Indibacter alkaliphilus LW1]
gi|403764421|gb|EJZ25322.1| putative internalin A [Indibacter alkaliphilus LW1]
Length = 502
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 49/187 (26%)
Query: 213 ANLRNLNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
ANL LN++NT+ SS +AG NLE+L+L+ T + D +S + + LK +++
Sbjct: 69 ANLTELNVANTQVSS-----IAGLEKATNLEVLNLNFTNVTD--MSPIQDLTGLKELNLW 121
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLN----------------HLERLNLEQTQVSD-- 312
N D++G + A D V +L L+ L+ +L+ LNL + VSD
Sbjct: 122 NLDLEG---EGAAILDFVQNLNELEFLDLRETPTSDISRLAGKSNLKHLNLREANVSDLS 178
Query: 313 -------------------ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ PL L +LSLRNA + D Q S +KL +I
Sbjct: 179 PLSGMTQFEYLNFNRCGNITDISPLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVESNI 238
Query: 354 RDAVLTN 360
R+ +T+
Sbjct: 239 RNTGITD 245
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 44 IALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLS- 102
IA L NL VL+L VTD+ +Q LT L+ L+LW + GAA+L L+
Sbjct: 84 IAGLEKATNLEVLNLNFTNVTDM--SPIQDLTGLKELNLWNLDLEGEGAAILDFVQNLNE 141
Query: 103 --FLNLAWT---GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
FL+L T +++L S+L+ LNL + + +PL+ ++
Sbjct: 142 LEFLDLRETPTSDISRLAGKSNLKHLNLREANVSDL-------SPLSGMT---------- 184
Query: 158 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA----CVGA 213
F Y L+F N ++ L M L +L L ++ +GD+ + + V +
Sbjct: 185 -QFEY-----LNFNRCGN--ITDISPLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVES 236
Query: 214 NLRNLNLSN 222
N+RN +++
Sbjct: 237 NIRNTGITD 245
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L+ L+V+N+ +S L + LE L+L+ + + D S + G L+ LNL N
Sbjct: 71 LTELNVANTQVSSIAGLEKATNLEVLNLNFTNVTDMS-PIQDLTG--LKELNLWNLDLEG 127
Query: 228 AGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFIQ 279
G IL +L LE L L T D IS ++ +LK +++ ++ G Q
Sbjct: 128 EGAAILDFVQNLNELEFLDLRETPTSD--ISRLAGKSNLKHLNLREANVSDLSPLSGMTQ 185
Query: 280 -------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
+ G TD+ + L + +L L+L +V D S + +L+ ++RN
Sbjct: 186 FEYLNFNRCGNITDI----SPLDGMVNLYYLSLRNAEVGDEQFKQFSQYTKLVESNIRNT 241
Query: 333 SLTDVS 338
+TD++
Sbjct: 242 GITDIT 247
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 54/317 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF S++ ++ L + LE LD+SS+ + D SV +A + NL +L
Sbjct: 156 -------LSF---SSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIA 202
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 332 ASLTDVSLHQLSSLSKL 348
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 31 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 88
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 89 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 141
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 142 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 198
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 199 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 252
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 253 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 310
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 311 LTYLTLYFNNISDIS--PVSSLTKL 333
>gi|228920141|ref|ZP_04083490.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228839597|gb|EEM84889.1| Internalin [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 766
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEFA---D 284
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 285 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 341
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 342 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 392
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 393 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 439
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 440 --PLSSLVNLQKLDLE 453
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 305 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 374 KPLYSLPLKDLVLTRNNV 391
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 54/317 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
L+ S++ ++ L + LE LD+SS+ + D SV +A + NL +L
Sbjct: 156 ----------LNFSSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIA 202
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 332 ASLTDVSLHQLSSLSKL 348
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
>gi|104646991|gb|ABF74119.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + + P+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEEFPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMXX 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 30 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 87
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 88 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 140
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 141 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 197
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 198 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 251
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 252 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 309
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 310 LTYLTLYFNNISDIS--PVSSLTKL 332
>gi|296209865|ref|XP_002751719.1| PREDICTED: F-box/LRR-repeat protein 13 [Callithrix jacchus]
Length = 825
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 337 LQELNVSDCPTFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRHFHNLQNLSLAYC 396
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRGAA------------VLKMFPRLS 102
TD L+ L + KL YLDL G +Q+S +G ++ P L+
Sbjct: 397 RRF--TDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGILHLIINDMPTLT 454
Query: 103 -------------FLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 148
++ +TG P+IS LS C + I EGN+ +I+
Sbjct: 455 DNCVKALVEKCSHITSMIFTGA---PHISDCTFKALSTCKLRKIRFEGNK------RITD 505
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEM 207
A F+++ Y + S + D + S L+ +K L L+L++ + IGD +
Sbjct: 506 ASFKFMDKN----YPDLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDVGLRQ 561
Query: 208 V--ACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPS 263
+R LNLSN + S V L+ PNL LSL + + I+Y+ + S
Sbjct: 562 FLDGPASIRIRELNLSNCVQLSDVSVLKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFS 621
Query: 264 LKFIDISNTDI 274
L ID+S TDI
Sbjct: 622 LVSIDLSGTDI 632
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 164/393 (41%), Gaps = 53/393 (13%)
Query: 26 ISTLEKLWLSETGLTADGIAL-------LSSLQNLSVLDLGGLPV-TDLVLRSL-QVLTK 76
+STL++ L+ L G L S +NL L++ P TD +R + +
Sbjct: 303 VSTLQRWHLNVLRLNFRGCLLRPKTFRSASHCRNLQELNVSDCPTFTDESMRHISEGCPG 362
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEG 136
+ YL+L + ++NR +++ PR F NL N+S C ++ + + G
Sbjct: 363 VLYLNLSNTTITNR---TMRLLPR-HFHNLQ--------NLSLAYCRRFTDKGLQYLNLG 410
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIE---TSLLSFLDVSNSSLSRFCFLTQMKALEHL 193
N L + L+G T I+ + F YI T +L + +L+ C ++ H+
Sbjct: 411 N-GCHKLIYLDLSGCTQISV-QGFRYIANSCTGILHLIINDMPTLTDNCVKALVEKCSHI 468
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRF------SSAGVGILAGHLPNLEILSLSG 247
+SMI + + C L L RF + A + + P+L + ++
Sbjct: 469 ---TSMIFTGAPHISDCTFKALSTCKLRKIRFEGNKRITDASFKFMDKNYPDLSHIYMAD 525
Query: 248 TQ-IDDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLTALQNLNHLER 302
+ I D ++ +S + L ++++N D+ G Q + + + L N
Sbjct: 526 CKGITDSSLRSLSPLKQLTVLNLANCVRIGDV-GLRQFLDGPASIRIRELNLSNC----- 579
Query: 303 LNLEQTQVSDATLFPLST-FKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTN 360
Q+SD ++ LS L +LSLRN LT + + ++ L ++ + ++N
Sbjct: 580 -----VQLSDVSVLKLSERCPNLNYLSLRNCEHLTAQGIAYIVNIFSLVSIDLSGTDISN 634
Query: 361 SGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
L + LK L + + +T+D I FCK
Sbjct: 635 EDLNVLSRHKKLKELSVSACYRITDDGIQAFCK 667
>gi|301052969|ref|YP_003791180.1| internalin [Bacillus cereus biovar anthracis str. CI]
gi|300375138|gb|ADK04042.1| internalin [Bacillus cereus biovar anthracis str. CI]
Length = 659
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 119 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 171
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L+ LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 172 VTPLVKMDHLNSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 228
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 229 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 277
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 278 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 326
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 327 --PLSSLVNLQKLDLE 340
>gi|423638533|ref|ZP_17614185.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
gi|401270849|gb|EJR76868.1| hypothetical protein IK7_04941, partial [Bacillus cereus VD156]
Length = 853
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 436
>gi|343420997|emb|CCD18942.1| leucine-rich repeat protein, putative [Trypanosoma vivax Y486]
Length = 623
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 190/404 (47%), Gaps = 81/404 (20%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLT-ADGIALLSSLQNLSVLDLGGL 61
L+ LDLS C +TD L+S L ++LS TG+T ++ LS L+ L+++ G
Sbjct: 225 LRTLDLSHCTGITDVLPLSLMS--NLCSVYLSHCTGITDVPPLSKLSRLETLNLMYCTG- 281
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLA-WTGVTKLP---N 116
+TD+ L L++LE L+L + + +++ + L + L L L+ TG+T +P
Sbjct: 282 -ITDV--SPLSKLSRLETLNLMYCTGITD--VSPLSLMSNLCSLYLSHCTGITDVPPLSK 336
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+S LE LNL CT G + +PL+ + S L LDVS
Sbjct: 337 LSRLETLNLMYCT------GITDVSPLSLM-------------------SRLEMLDVSGC 371
Query: 177 S-LSRFCFLTQMKALEHLDLS-SSMIGDDS-----VEMVACVGANLRNLNLSNTRFSSAG 229
+ ++ L+ + L LDLS + I D S +E+ ANL + L++ S
Sbjct: 372 TGITDVSPLSDLSNLRTLDLSYCTGITDVSPLSEIIEL-----ANLYMIGLTSITDVS-- 424
Query: 230 VGILAGHLPNLEILSLSG-TQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV 288
L + LE+L LSG T I D +S +S + L+ +D ++ TD
Sbjct: 425 ---LLKKVKKLEVLYLSGCTSITD--VSPLSTLSGLEKLD---------LRYCTGITD-- 468
Query: 289 LSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLS 346
++ L L+ LE+L+L T ++D + PLST L L L + +TDVS LS+LS
Sbjct: 469 --VSPLSTLSGLEKLDLRYCTGITDVS--PLSTLSGLGKLDLSGCTGITDVS--PLSTLS 522
Query: 347 KLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQ 390
+L L + + S + S R L+ +L L DA+L+
Sbjct: 523 RLETLDLSECPGVMSDVDSLCSLRMLR--ELRLSRLAINDAVLR 564
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 191/401 (47%), Gaps = 61/401 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLT-ADGIALLSSLQNLSVLDLGGL 61
L+ LDLS C +TD L+ S L ++LS TG+T ++ LS L+ L+++ G
Sbjct: 18 LRTLDLSHCTGITDVLPLSLM--SNLCSVYLSHCTGITDVPPLSKLSRLETLNLMYCTG- 74
Query: 62 PVTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW----TGVTKLPN 116
+TD + L L++LE L+L + + +++ + L RL LNL + T V+ L
Sbjct: 75 -ITD--VSPLSKLSRLETLNLMYCTGITD--VSPLSKLSRLETLNLMYCTGITDVSPLSL 129
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSN 175
IS+L L+LS+CT G + PL+ +S + +++ + S LS L+ N
Sbjct: 130 ISNLRTLDLSHCT------GITDVLPLSLMSNLCSLYLSHCTGITDVPPLSKLSRLETLN 183
Query: 176 ----SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGV 230
+ ++ L+++ LE L+L G V ++ + +NLR L+LS+ T +
Sbjct: 184 LMYCTGITDVSPLSKLSRLETLNLMYC-TGITDVSPLSLI-SNLRTLDLSHCTGITDVLP 241
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN-TDIKGFIQQVGAETDLVL 289
L +L ++ + +G D +S +S + +L + + TD+
Sbjct: 242 LSLMSNLCSVYLSHCTGIT-DVPPLSKLSRLETLNLMYCTGITDV--------------- 285
Query: 290 SLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSK 347
+ L L+ LE LNL T ++D + PLS L L L + + +TDV LS LS+
Sbjct: 286 --SPLSKLSRLETLNLMYCTGITDVS--PLSLMSNLCSLYLSHCTGITDVP--PLSKLSR 339
Query: 348 LTNLSIRDAVLTNSGLGSFKP---PRSLKLLDLHGGWLLTE 385
L L++ + +G+ P L++LD+ G +T+
Sbjct: 340 LETLNL----MYCTGITDVSPLSLMSRLEMLDVSGCTGITD 376
>gi|332661885|ref|YP_004451355.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
gi|332337382|gb|AEE54482.1| small GTP-binding protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1141
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 143/336 (42%), Gaps = 89/336 (26%)
Query: 47 LSSLQNLSVLDLGGLPVTDLV--------------------LRSLQVLTKLEYLDLWGSQ 86
LS+L NLS LDL V+DL LRSL+ L L L L ++
Sbjct: 198 LSALSNLSFLDLSFTQVSDLSGLSTLSNLSSLNLRDTYSSDLRSLRPLINLSDLKLSSTE 257
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKI 146
VS+ +VL LS L+L++T V+ L +S+L
Sbjct: 258 VSD--LSVLAHLHNLSSLHLSYTQVSDLSALSAL-------------------------- 289
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVE 206
S LSFLD+S++ +S L+ + L L+LS++ I D S
Sbjct: 290 -------------------SNLSFLDLSDTQVSDLSALSALYNLSFLNLSNTQISDLSA- 329
Query: 207 MVACVGANLRN-LNLSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDY-AISYMSMMP 262
LR+ LNLS SS + L HL NL ++L+ T D A+S +S +
Sbjct: 330 --------LRHLLNLSIIDLSSTELTDLTTLRHLQNLNSINLNKTHASDLSALSNLSNLS 381
Query: 263 SLKFIDISNTDIKGF-----IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
L D +D+ + + V L+AL NL +L L+L T+V D L P
Sbjct: 382 ELYLSDTQASDLSALSALFNLNSLNLSYTQVSGLSALANLQNLSSLDLGDTEVFD--LSP 439
Query: 318 LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L+ + L L L + + D+S + +LSKL L++
Sbjct: 440 LANLQNLSSLDLSDTEVVDLS--PMINLSKLKYLNL 473
>gi|290985429|ref|XP_002675428.1| predicted protein [Naegleria gruberi]
gi|284089024|gb|EFC42684.1| predicted protein [Naegleria gruberi]
Length = 451
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 152/340 (44%), Gaps = 48/340 (14%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
+S ++ L+ L + G + D + + + +L LD+ + + + GA L +L LN
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEMKQLTSLDISANLIGDEGAKYLSEMKQLISLN 186
Query: 106 LAWT----GVTKLPNISSLECLNLSNCTIDSILEGNE---NKAPLAKISLAGTTFINERE 158
+ G + + L L++S +D +EG + L +++ G I
Sbjct: 187 IGKNEIDEGAKYISEMKQLASLDISYTQVD--VEGAKCIREMRQLTSLNICGNR-IGIEG 243
Query: 159 AFLYIETSLLSFLDVSNS--SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA------- 209
L E L+ L++ S + +++MK L L++S+++IGD+ ++++
Sbjct: 244 VKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLIS 303
Query: 210 -CVGAN---------------LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
+ AN LR+LN+SN R GV +++ + L L++ +I +
Sbjct: 304 LNIRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVKLIS-EMKQLISLNIRSNRISNE 362
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+S M L ++ISN +I ET L+ + L++L+ ++ Q + A
Sbjct: 363 GTKLISEMRQLTLLNISNNEIG------DEETKLISEMKQLKSLD----ISYNQIGIEGA 412
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L +S K+L L++ + + +S + +LT++++
Sbjct: 413 KL--ISEMKQLTSLNIADNRIGGEGAKLISEMKQLTSITL 450
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F+++MK L L +S + IGD+ ++++ + L +L++S G L+ + L
Sbjct: 127 FISKMKQLTSLSISGNGIGDEEAKLISEM-KQLTSLDISANLIGDEGAKYLS-EMKQLIS 184
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKGF--IQQVGAETDL--------VLS 290
L++ +ID+ A Y+S M L +DIS T D++G I+++ T L +
Sbjct: 185 LNIGKNEIDEGA-KYISEMKQLASLDISYTQVDVEGAKCIREMRQLTSLNICGNRIGIEG 243
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
+ + + L LN+ ++ + +S K+L L++ N + D +S + +L +
Sbjct: 244 VKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLIS 303
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L+IR + N G R L+ L++
Sbjct: 304 LNIRANRIVNQGAKFISEMRQLRSLNI 330
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 115/244 (47%), Gaps = 37/244 (15%)
Query: 3 CLKEL----DLSRC-VKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 57
C++E+ L+ C ++ G+K + + L L + E+ + +G L+S ++ L+ L+
Sbjct: 222 CIREMRQLTSLNICGNRIGIEGVKLISEMRQLTSLNIGESDIGIEGTKLISEMKQLTSLN 281
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLA-----WTGVT 112
+ + D + + + +L L++ +++ N+GA + +L LN++ GV
Sbjct: 282 ISNNLIGDEGAKLISEMKQLISLNIRANRIVNQGAKFISEMRQLRSLNISNNRIGIEGVK 341
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
+ + L LN+ + +IS GT I+E L+ L+
Sbjct: 342 LISEMKQLISLNIRS----------------NRISNEGTKLISEMRQ--------LTLLN 377
Query: 173 VSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
+SN+ + +++MK L+ LD+S + IG + ++++ + L +LN+++ R G
Sbjct: 378 ISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKLISEM-KQLTSLNIADNRIGGEGA 436
Query: 231 GILA 234
+++
Sbjct: 437 KLIS 440
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNL 240
++++MK L LD+S + + VE C+ L +LN+ R GV +++ + L
Sbjct: 198 YISEMKQLASLDISYTQV---DVEGAKCIREMRQLTSLNICGNRIGIEGVKLIS-EMRQL 253
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN---- 296
L++ + I +S M L ++ISN I ++ +E ++SL N
Sbjct: 254 TSLNIGESDIGIEGTKLISEMKQLTSLNISNNLIGDEGAKLISEMKQLISLNIRANRIVN 313
Query: 297 --------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
+ L LN+ ++ + +S K+LI L++R+ +++ +S + +L
Sbjct: 314 QGAKFISEMRQLRSLNISNNRIGIEGVKLISEMKQLISLNIRSNRISNEGTKLISEMRQL 373
Query: 349 TNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
T L+I + + + + LK LD+ + E A L
Sbjct: 374 TLLNISNNEIGDEETKLISEMKQLKSLDISYNQIGIEGAKL 414
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 54/317 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 57 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 111
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 112 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ---- 155
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF S++ ++ L + LE LD+SS+ + D SV +A + NL +L
Sbjct: 156 -------LSF---SSNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIA 202
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 203 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 256
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 314
Query: 332 ASLTDVSLHQLSSLSKL 348
+++D+S +SSL+KL
Sbjct: 315 NNISDIS--PVSSLTKL 329
>gi|87308228|ref|ZP_01090370.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
gi|87289310|gb|EAQ81202.1| hypothetical protein DSM3645_21562 [Blastopirellula marina DSM
3645]
Length = 438
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ELDL+ K+TD G+ +L +S LE L LSET +++ S LQ+L L L +
Sbjct: 286 LRELDLTGS-KITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLHNTKL 344
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSL 120
+ + L LE++DL S V L+ P+L + L T G LP + L
Sbjct: 345 DGQAMVDIAKLKNLEWIDLSKSNVQGEQLLELRKLPKLRGVVLMNTPIGAADLPYLKQL 403
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV- 230
+ +S F L +++ LE ++ + +I A +G L NLN N R S +
Sbjct: 124 TKASSDSFFGLEELRKLEQVEFTDLVINQ------AVIGGLRGLPNLNQFNIRNSELALP 177
Query: 231 -GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIKGFIQQVGAET 285
+ P L+ L + G + D I + +P+L+ + +S I F +
Sbjct: 178 WALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQFTINDFRRLADLPN 237
Query: 286 DLVLSLT-----------ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+ LSL A Q L +++LN+ QT + + L + F L L L + +
Sbjct: 238 LVDLSLVRSSLPDESCPLATQQLK-IQKLNVGQTGIGNQFLSTIGDFPNLRELDLTGSKI 296
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLH 378
TD L LS LS+L +L++ + ++++ F +SL+ L LH
Sbjct: 297 TDGGLAYLSELSQLESLTLSETNISSAAAKHFSQLQSLRELHLH 340
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 145/329 (44%), Gaps = 47/329 (14%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
D G++ + ++S L+ L +++T ++D L L+ L ++ L + V+ L+ L
Sbjct: 104 DKGIRVVTTLSPLKALLIAKTKASSDSFFGLEELRKLEQVEFTDLVINQAVIGGLRGLPN 163
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFL-------NLAWTG-VTKLPNISSLE--C---- 122
L ++ S+++ A + FP+L L + A G V +P + L+ C
Sbjct: 164 LNQFNIRNSELALPWALDERSFPQLKTLLIDGGKADAALIGEVCSIPTLQQLQLSCPVGQ 223
Query: 123 ---------LNLSNCTIDSILEGN--ENKAPLAKISL------AGTTFINEREAFLYIET 165
+L N S++ + + PLA L G T I + +
Sbjct: 224 FTINDFRRLADLPNLVDLSLVRSSLPDESCPLATQQLKIQKLNVGQTGIGNQFLSTIGDF 283
Query: 166 SLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
L LD++ S ++ +L+++ LE L LS + I + + + + +LR L+L NT
Sbjct: 284 PNLRELDLTGSKITDGGLAYLSELSQLESLTLSETNISSAAAKHFSQL-QSLRELHLHNT 342
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
+ + +A L NLE + LS + + + + +P L+ + + NT I GA
Sbjct: 343 KLDGQAMVDIA-KLKNLEWIDLSKSNVQGEQLLELRKLPKLRGVVLMNTPI-------GA 394
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSD 312
L L+ L H++ + +E+T +++
Sbjct: 395 A-----DLPYLKQLYHIDEIYVEETNLTN 418
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 160/362 (44%), Gaps = 37/362 (10%)
Query: 9 LSRCVKVTDAGMKH-----LLSISTLEKLWLSETGLTADGIALLSSLQNLSVL---DLGG 60
LS K+T G+ + S+S L KL + GL+ + I+ + SL NL+ L DL G
Sbjct: 103 LSNLTKLTSLGLSKNKISDIKSLSNLTKL--TSLGLSKNKISDIKSLSNLTKLTKLDLVG 160
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT---KLPNI 117
++D L LTKL LDLWG+Q+S+ L L+FLNL ++ L N+
Sbjct: 161 NQISDTT--PLSNLTKLTSLDLWGNQISD--IKPLSNLTNLTFLNLVGNKISDIKPLSNL 216
Query: 118 SSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSS 177
+ L L LS I I + N L K+ L G + + L+ LD+ +
Sbjct: 217 TKLTSLGLSKNKISDI-KSLSNFTNLTKLDLVGNQI---SDTTPLSNLTKLTSLDLWGNQ 272
Query: 178 LSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHL 237
+S L+ + L L L + I + ++ ++ + NL +L LS + S +L
Sbjct: 273 ISDIKPLSNLTNLTFLILWGNQISN--IKPLSNL-TNLTSLTLSLNQISDIKP---LSNL 326
Query: 238 PNLEILSLSGTQIDDYA------ISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL 291
NL L L G +I D + S K DI + + + + +
Sbjct: 327 TNLTYLDLWGNKISDIKPLSNLTNLTYLYLLSNKISDIKPLSNLTNLTLLFLSLNQISDI 386
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L +L L L + Q+SD + PLS L L L ++D+ LS+L+ LT L
Sbjct: 387 KPLSSLTNLTFLILSKNQISD--IKPLSNLTNLTSLGLSENKISDI--KPLSNLTNLTYL 442
Query: 352 SI 353
S+
Sbjct: 443 SL 444
>gi|345783005|ref|XP_852464.2| PREDICTED: F-box/LRR-repeat protein 13 [Canis lupus familiaris]
Length = 1050
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 45/370 (12%)
Query: 40 TADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVL-KM 97
T ++L +LQ L+V D L TD +R + + + YL+L + ++NR +L +
Sbjct: 553 TLRSVSLCRNLQELNVSDCPTL--TDESMRYISEGCAGVLYLNLSNTTITNRTMRLLPRY 610
Query: 98 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 157
FP L L+LA+ K + L LNL N L + L+G T I+
Sbjct: 611 FPNLQNLSLAY--CRKFTD-KGLRYLNLGN-----------GCHKLIYLDLSGCTQISV- 655
Query: 158 EAFLYIETSLLSFLDVSNS---SLSRFCFLTQMKAL-EHLDLSSSMIGDDSVEMVACVGA 213
+ F I S + ++ + +L+ C +KAL E +S++ + + C
Sbjct: 656 QGFRNIANSCTGIMHLTINDMPTLTDNC----VKALAEKCTRITSIVFIGAPHISDCAFK 711
Query: 214 NLRNLNLSNTRF------SSAGVGILAGHLPNL-EILSLSGTQIDDYAISYMSMMPSLKF 266
L NL RF + A + + PN+ I + +I D ++ +S + L
Sbjct: 712 ALSTCNLRKIRFEGNKRITDACFKYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTV 771
Query: 267 IDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLS-TFKEL 324
++++N I+ I VG + L ++ + LNL +SDA++ LS L
Sbjct: 772 LNLANC-IR--IGDVGLKQFLDGPVST-----RIRELNLSNCIHLSDASIVKLSERCSNL 823
Query: 325 IHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLL 383
+LSLRN LTD+ + + + L ++ + ++N GL S + LK L L + +
Sbjct: 824 NYLSLRNCEYLTDLGIEHIVYIFSLVSVDLSGTNISNEGLMSLSRHKKLKELSLSECYKI 883
Query: 384 TEDAILQFCK 393
T+ I FCK
Sbjct: 884 TDVGIQAFCK 893
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 41/304 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C +TD M+++ + + L LS T +T + LL +LQNLS+
Sbjct: 563 LQELNVSDCPTLTDESMRYISEGCAGVLYLNLSNTTITNRTMRLLPRYFPNLQNLSLAYC 622
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWG-SQVSNRG--------AAVLKM----FPRLS 102
TD LR L + KL YLDL G +Q+S +G ++ + P L+
Sbjct: 623 RKF--TDKGLRYLNLGNGCHKLIYLDLSGCTQISVQGFRNIANSCTGIMHLTINDMPTLT 680
Query: 103 --FLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
+ T++ +I + ++S+C ++ N L KI G I + F
Sbjct: 681 DNCVKALAEKCTRITSIVFIGAPHISDCAFKALSTCN-----LRKIRFEGNKRITD-ACF 734
Query: 161 LYIETSL-----LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACVG 212
YI + + +D + L+ +K L L+L++ + IGD ++ V
Sbjct: 735 KYIHKNYPNINHIYMVDCKRITDGSLMSLSPLKQLTVLNLANCIRIGDVGLKQFLDGPVS 794
Query: 213 ANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDIS 270
+R LNLSN S A + L+ NL LSL + + D I ++ + SL +D+S
Sbjct: 795 TRIRELNLSNCIHLSDASIVKLSERCSNLNYLSLRNCEYLTDLGIEHIVYIFSLVSVDLS 854
Query: 271 NTDI 274
T+I
Sbjct: 855 GTNI 858
>gi|104647011|gb|ABF74129.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DL RC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|242044720|ref|XP_002460231.1| hypothetical protein SORBIDRAFT_02g025040 [Sorghum bicolor]
gi|241923608|gb|EER96752.1| hypothetical protein SORBIDRAFT_02g025040 [Sorghum bicolor]
Length = 1223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L + LE+L LS LT + A + S +L LDL G ++ + S+ L +L YL L
Sbjct: 581 LCRLKNLERLALSNNSLTGEIPACIGSATSLGELDLSGNMLSGAIPSSIGSLAELRYLFL 640
Query: 83 WGSQVSNRGAAVLKMFPRLSFLNL---AWTGVT--KLPNIS--SLECLNLSNCTIDSILE 135
G+++S L + L ++L + TGV + P I+ +L LNLS + L
Sbjct: 641 QGNKLSGAIPPSLGRYATLLVIDLSNNSLTGVIPDEFPGIAKTTLWTLNLSRNQLGGKLP 700
Query: 136 -GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEH 192
G N + KI L+ F E F + L+ LD+S++SL+ L ++K+LE
Sbjct: 701 TGLSNMQQVQKIDLSRNNF--NGEIFSLGDCIALTVLDLSHNSLAGDLPSTLDKLKSLES 758
Query: 193 LDLSSSMI-GDDSVEMVACVGANLRNLNLSNTRF----SSAGVGILAGHLPNLEILSLSG 247
LD+S++ + G+ + + C L+ LNLS F S G + G L L LSG
Sbjct: 759 LDVSNNHLSGEIPMSLTDC--QMLKYLNLSYNDFWGVVPSTGPFVNFGCLSYLGNRRLSG 816
Query: 248 TQIDDYAISYMSMMPSLKFIDI 269
+ + S S KF+ I
Sbjct: 817 PVLRRCRGRHRSWYQSRKFLVI 838
>gi|168030611|ref|XP_001767816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680898|gb|EDQ67330.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 628
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 184/411 (44%), Gaps = 36/411 (8%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE-TGLTADGIALLS-SLQNLSVLDLGGL 61
L++L L C VTD+G+ L L L L +GL GI ++ Q L ++DL
Sbjct: 136 LQKLKLDSCRDVTDSGLSSLSRCKGLRILGLKYCSGLGDFGIQNVAIGCQRLYIIDLSFT 195
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVL----KMFPRLSF---LNLAWTGVTK 113
V+D L SL +L LE L L V+++G + L K +L+ LN++ G+ +
Sbjct: 196 EVSDKGLASLALLKHLECLSLISCINVTDKGLSCLRNGCKSLQKLNVAKCLNVSSQGIIE 255
Query: 114 LPNIS-SLECLNLSNCT-IDSILEGNENK-APLAKISLAGTTFINEREAFL------YIE 164
L S L+ LNLS C I ++L + K L + L G + + + E
Sbjct: 256 LTGSSVQLQELNLSYCKLISNVLFASFQKLKTLQVVKLDGCVIGDSNLSLIGSGCIELKE 315
Query: 165 TSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNT 223
SL V+++ + +T L+ LDL+ I D +++ VA L +L + N
Sbjct: 316 LSLSKCQGVTDAGVVGV--VTSCTGLQKLDLTCCRDITDTALKAVATSCTGLLSLRMENC 373
Query: 224 RFSSA-GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-DIK-GFIQQ 280
+A G+ ++ LE L L+ ++D + + L+ + + DI +
Sbjct: 374 LLVTAEGLIMIGKSCVYLEELDLTDCNLNDNGLKSIGRCRGLRLLKVGYCMDITYAGLAS 433
Query: 281 VGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 340
+GA + T L+ L+ + + V A + ++++LS +S+TD SLH
Sbjct: 434 IGA------TCTNLRELDCYRSVGISDEGV--AAIASGCKRLKVVNLSY-CSSITDASLH 484
Query: 341 QLSSLSKLTNLSIRDAV-LTNSGLGSFKPP-RSLKLLDLHGGWLLTEDAIL 389
L+ LS L L +R +T++G+ + L+ LD+ + + +L
Sbjct: 485 SLALLSDLVQLELRACSQITSAGISYIGASCKHLRELDVKRCKFVGDHGVL 535
>gi|104646977|gb|ABF74112.1| disease resistance protein [Arabidopsis thaliana]
gi|104646979|gb|ABF74113.1| disease resistance protein [Arabidopsis thaliana]
gi|104646981|gb|ABF74114.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DL RC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|434404320|ref|YP_007147205.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428258575|gb|AFZ24525.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 864
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 182/368 (49%), Gaps = 54/368 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L+ L L R V++ D + L S+++L+ L +S +G+ L L +L L L
Sbjct: 371 MNWLESLSL-RQVQIKD--ISPLTSLNSLKNLAISRKPF--EGLQPLGELTSLESLSLDR 425
Query: 61 LPVTDLV-LRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS- 118
+ +TDL + S Q L +L L+ + N A + P L L+L T VT ++
Sbjct: 426 MQITDLAPIISCQSLKRLS-LNYTPLETVNDIAKI----PSLQHLSLDSTKVTNFQPLAL 480
Query: 119 --SLECLNLSNCTIDSILEGNENKAPLAKIS-----LAGTTFINEREAFLYIETSLLSFL 171
SLE L++S+ I+ I PL+ I+ +A + + ++ L L
Sbjct: 481 LPSLEYLSISDNQIEDI-------TPLSSITGLKDLIAERINLEDWSPLQQMQN--LEKL 531
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSV--EMVACVGANLRNLNLSNTRFSSAG 229
V +SS+S FL + L+ L+LS + + D S ++V LR L+L NT +
Sbjct: 532 SVQDSSVSDISFLAPISKLQILNLSGTRVVDVSPLQQLV-----ELRELSLFNTEVN--D 584
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQV 281
+ +L G L +L+ L L + + D+ S +S +P+++ + +S++ I ++++
Sbjct: 585 IRVLVG-LNHLKTLYLDSSAVRDF--SPLSHLPTIESLSLSSSSIIDLSWLPNLTNLKEL 641
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD----V 337
+ V ++AL+ L +LE+LNL++T + + + L+T +LI L+L + + D +
Sbjct: 642 CLDYTEVADISALETLPNLEKLNLKKTDIQNFS--KLTTLSKLISLNLHSCEVEDLSWLI 699
Query: 338 SLHQLSSL 345
SLH + L
Sbjct: 700 SLHDIQEL 707
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 61/342 (17%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDL 82
L + LEKL + ++ ++ I+ L+ + L +L+L G V D+ LQ L +L L L
Sbjct: 522 LQQMQNLEKLSVQDSSVS--DISFLAPISKLQILNLSGTRVVDV--SPLQQLVELRELSL 577
Query: 83 WGSQVSN--------------RGAAVLKMFPRLSFLNLAWTGVTK---------LPNISS 119
+ ++V++ ++ ++ F LS L + LPN+++
Sbjct: 578 FNTEVNDIRVLVGLNHLKTLYLDSSAVRDFSPLSHLPTIESLSLSSSSIIDLSWLPNLTN 637
Query: 120 LE--CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFLDVSNS 176
L+ CL+ + S LE N L K++L T N F + T S L L++ +
Sbjct: 638 LKELCLDYTEVADISALETLPN---LEKLNLKKTDIQN----FSKLTTLSKLISLNLHSC 690
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
+ +L + ++ L LS + I D + ++A + A L+ L+LS T S + H
Sbjct: 691 EVEDLSWLISLHDIQELILSRTGIQD--INLLAAL-AYLKVLDLSETEVESINALADSAH 747
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
L E+L +S T++ +I ++ +L+ ++++ T ++ L+ L+N
Sbjct: 748 L---EVLDISETKVQ--SIEALTNARALRSLNLNLTSVEN--------------LSPLKN 788
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
LE L++ +T VSD ++ L+ FK L L +RN S+ D S
Sbjct: 789 SLQLEELSIWRTPVSDLSV--LNNFKHLKKLDIRNTSVEDFS 828
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423579623|ref|ZP_17555734.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
gi|401218085|gb|EJR24770.1| hypothetical protein IIA_01138 [Bacillus cereus VD014]
Length = 760
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNYLALRGNEFA---D 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ LT+MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLTEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ ++K
Sbjct: 336 NLANNKIKN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNNVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + + L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDEMKQLNKLFVGKNQIKDVT--PLTKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 58/198 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L +L L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNYLALRGNEFADVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ V L + N++ L LSG QI+D
Sbjct: 299 TN--VAPLT-EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKIKNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGL 363
L +L ++D VLT + +
Sbjct: 368 KPLYSLPLKDLVLTRNNV 385
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDSLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF------- 277
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 278 -IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ ++ T+ + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGTNQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|104646937|gb|ABF74092.1| disease resistance protein [Arabidopsis thaliana]
gi|104646967|gb|ABF74107.1| disease resistance protein [Arabidopsis thaliana]
gi|104646995|gb|ABF74121.1| disease resistance protein [Arabidopsis thaliana]
gi|104647009|gb|ABF74128.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DL RC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 56/317 (17%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 67 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 124
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 125 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 163
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + +LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 164 --LSF----GNQVTDLKPLANLTSLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 214
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----- 279
S +GILA NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 215 SDITPLGILA----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANDQISNLAPLSGLT 268
Query: 280 -----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++GA + + +++ L L L L L + Q+ D + P+S K L +L+L ++
Sbjct: 269 KLTELKLGA--NQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNI 324
Query: 335 TDVSLHQLSSLSKLTNL 351
+D+S +SSL+KL L
Sbjct: 325 SDIS--PVSSLTKLQRL 339
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 172
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|423524772|ref|ZP_17501245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
gi|401168998|gb|EJQ76245.1| hypothetical protein IGC_04155 [Bacillus cereus HuA4-10]
Length = 752
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMDNLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + + V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 386
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++
Sbjct: 387 -----------DLSGIDQMNQLNKLFIGKNQIKDVT--PLAKMTQLTELDLPNNELKDIT 433
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 434 --PLSSLVNLQKLDLE 447
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DNLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|328869082|gb|EGG17460.1| hypothetical protein DFA_08455 [Dictyostelium fasciculatum]
Length = 713
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 74/323 (22%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSL---------- 50
MT L L+L+ +++D +K + ++ L L L TG+T G+ LLS L
Sbjct: 371 MTNLTSLNLT-GTRISDVSLKFIRRLTLLRSLSLRNTGITEKGVLLLSPLSKLESLDLTN 429
Query: 51 --------------QNLSVL-------------DLGGLPVTDLVL--------RSLQVLT 75
NL+ L D+ LP+T L L S+ LT
Sbjct: 430 LLLTDTSMLTVATFSNLNTLLLGNALVTEKGINDISNLPITTLSLLHCKKINNASMVYLT 489
Query: 76 K----LEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTID 131
K LE LD+ G+ V G LK F +L L +LPN C D
Sbjct: 490 KYQNTLESLDITGTMVMGMGFIHLKRFKKLRDL--------QLPN---------RLCITD 532
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA-- 189
++ ++ ++K+ L+ T I + ++ L L +SN+ +S T +K
Sbjct: 533 DTIKHLDSLEFISKLHLSDYTQITSITSIPNLKR--LVDLSLSNTKISDDSIPTILKYLN 590
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ 249
LEHL+L + + D V +A + L L+LS+T+ + L+G + L+ L++S +
Sbjct: 591 LEHLNLDRTNVTDFGVSQLAVL--QLTTLSLSSTKINGTCFPELSG-ITLLKWLNVSNNE 647
Query: 250 IDDYAISYMSMMPSLKFIDISNT 272
IDD + + +P L+FID+ T
Sbjct: 648 IDDAKVPALFKLPELQFIDLRGT 670
>gi|227815825|ref|YP_002815834.1| internalin, partial [Bacillus anthracis str. CDC 684]
gi|227007550|gb|ACP17293.1| internalin [Bacillus anthracis str. CDC 684]
Length = 526
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 45/218 (20%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 4 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 58
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG--------- 276
++ I + N++ L LSG QI+D ++ ++ M L +++++N I
Sbjct: 59 TNVAPLI---EMKNVKSLYLSGNQIED--VTALAKMEQLDYLNLANNKITNVAPLSALKN 113
Query: 277 --FIQQVGAE------------TDLVLS------LTALQNLNHLERLNLEQTQVSDATLF 316
++ G + TDLVL+ L+ ++ + LE L + + ++ D T
Sbjct: 114 VTYLTLAGNQIEDIKPLYSLPLTDLVLTRNKVKDLSGIEQMKQLEELWIGKNEIKDVT-- 171
Query: 317 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
PLS +L L L N L D++ LSSL L L +
Sbjct: 172 PLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLE 207
>gi|195127626|ref|XP_002008269.1| GI11909 [Drosophila mojavensis]
gi|193919878|gb|EDW18745.1| GI11909 [Drosophila mojavensis]
Length = 1550
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 28/362 (7%)
Query: 32 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
++ +E G ALL +L L LD+ G +++L +L+ LE L L +Q+ +
Sbjct: 339 IYNNEIGHVEALRALLDALPTLRFLDMSGNLLSELPYGALRGHGTLEQLHLNNNQLRSIE 398
Query: 92 AAVLKMFPRLSFLNLAWTGVT---KLP--NISSLECLNLSN---CTIDS-ILEGNENKAP 142
L P L L + ++ LP N+ L+ L+L+ +DS +L G
Sbjct: 399 RDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFVRVDSQLLAG---LPS 455
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
L ++ L+ + + A + SLL L++S++ L+ T M ++ +S +
Sbjct: 456 LRRLDLSENGLV-DLAANSFRHNSLLETLNISSNELTHIYPGTFMHLERLFEVDASY--N 512
Query: 203 DSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
M+ + + ++L R SS G + LPNL +L LS I+
Sbjct: 513 QLTAMIPGLPQIVERISLRGNRISSLPPAGSKSLQLPNLRMLDLSQNLIEQLPRHGFQAA 572
Query: 262 PSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
P L+ + ++ ++ +L T+ + LE L+L+ Q+S A L
Sbjct: 573 PELRVLSLAQNQLR------------LLEDTSFIGIQRLELLHLQDNQLSQADERALLPL 620
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGW 381
EL +L+L++ L ++ + S+ S+L L + ++ +F RSL+ LDL G
Sbjct: 621 AELRNLNLQSNKLESITDNFFSNNSRLEQLDLSRNLIRTISPTAFDNQRSLEYLDLSGNA 680
Query: 382 LL 383
LL
Sbjct: 681 LL 682
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|148671256|gb|EDL03203.1| F-box and leucine-rich repeat protein 13 [Mus musculus]
Length = 648
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 72/258 (27%)
Query: 7 LDLSRCVKVTDAGMKHLL---SISTLEKLWLSETGLTADG--IALLSSLQNLSVLDLGGL 61
L+L+ C+++ D G+KH + L +L L+ L D I L NL L+L
Sbjct: 365 LNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNC 424
Query: 62 P-VTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+TDL + + + L +DL G+ +SN G +L KL +S
Sbjct: 425 EHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRH-------------RKLREVSVS 471
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
+C+N+++ I + Y +TSLL
Sbjct: 472 DCVNITDFGIRA-----------------------------YCKTSLL------------ 490
Query: 181 FCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAGVGILAGHLP 238
LEHLD+S S + DD ++ +A + +LN++ + + AG+ IL+
Sbjct: 491 ---------LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAGMEILSARCH 541
Query: 239 NLEILSLSGT-QIDDYAI 255
L IL +SG Q+ D I
Sbjct: 542 YLHILDISGCIQLTDQII 559
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSETGLTADGIALL----SSLQNLSVLDL 58
L+EL++S C TD M+H+ + L LS T +T + LL +LQNLS+
Sbjct: 189 LQELNVSDCQSFTDESMRHISEGCPGVLYLNLSNTTITNRTMRLLPRYFHNLQNLSLAYC 248
Query: 59 GGLPVTDLVLRSLQV---LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP 115
TD L+ L + KL YLDL G +++ PR+S + L + P
Sbjct: 249 RKF--TDKGLQYLNLGNGCHKLIYLDLSGCT-----QVLVEKCPRISSVVLIGS-----P 296
Query: 116 NISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+IS LS+C + I EGN+ +IS A I+ Y + + +D
Sbjct: 297 HISDSAFKALSSCDLKKIRFEGNK------RISDACFKSIDRN----YPGINHIYMVDCK 346
Query: 175 NSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMV--ACVGANLRNLNLSNTR-FSSAGV 230
+ S L+ +K L L+L++ + IGD ++ LR LNL+N + V
Sbjct: 347 GLTDSSLKSLSLLKQLTVLNLTNCIRIGDIGLKHFFDGPASIRLRELNLTNCSLLGDSSV 406
Query: 231 GILAGHLPNLEILSLSGTQ-IDDYAISYMSMMPSLKFIDISNT 272
L+ PNL L+L + + D AI Y++ M SL +D+S T
Sbjct: 407 IRLSERCPNLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGT 449
>gi|196035360|ref|ZP_03102765.1| putative internalin [Bacillus cereus W]
gi|195992037|gb|EDX56000.1| putative internalin [Bacillus cereus W]
Length = 765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
>gi|423552836|ref|ZP_17529163.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
gi|401185449|gb|EJQ92543.1| hypothetical protein IGW_03467 [Bacillus cereus ISP3191]
Length = 765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 432
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
>gi|254726170|ref|ZP_05187952.1| putative internalin [Bacillus anthracis str. A1055]
Length = 682
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 142 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 194
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 195 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 251
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 252 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 300
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 301 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 349
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 350 --PLSSLVNLQKLDLE 363
>gi|49480077|ref|YP_035555.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49331633|gb|AAT62279.1| internalin [Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|118476901|ref|YP_894052.1| internalin [Bacillus thuringiensis str. Al Hakam]
gi|118416126|gb|ABK84545.1| internalin [Bacillus thuringiensis str. Al Hakam]
Length = 777
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|334145937|ref|YP_004508864.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
gi|333803091|dbj|BAK24298.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
Length = 1384
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 35/380 (9%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
++ L S+++L +L+LS G + L++L +L+ L L G + L L LT L
Sbjct: 234 LEGLDSLTSLTELYLS--GNQIAKLEGLNALTSLTELYLSGNQIAKL--EGLNALTSLTG 289
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNI---SSLECLNLSNCTIDSILEG 136
L+L G+Q+S + L L+ LNL+ + KL + +SL L+L I + LEG
Sbjct: 290 LNLSGNQISKLES--LASLTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQI-AKLEG 346
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS 196
++ L ++ L G I + E + + L+ LD+S + +S+ L + +L LDLS
Sbjct: 347 LDHLTSLTRLDLRGNQ-IRKLEGLDSLTS--LTQLDLSGNQISKLESLNALTSLTELDLS 403
Query: 197 SSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS 256
+ I ++E +A + +L L+LS+ + + G+ A L +L L L G QI +
Sbjct: 404 DNQIA--TLESLASL-TSLTELDLSDNQIAKLE-GLNA--LTSLTGLDLRGNQI--AKLE 455
Query: 257 YMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQT 308
+ + SL +D+ I+ + Q+ + + L +L L L L+L
Sbjct: 456 GLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDN 515
Query: 309 QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 368
Q+ ATL L+ L L L + + L L+SL+ LT L + D + + L K
Sbjct: 516 QI--ATLEGLNALTSLTRLDLSDNQI--AKLESLASLTSLTRLDLSDNQI--AKLEGLKD 569
Query: 369 PRSLKLLDLHGGWLLTEDAI 388
L+ LD+ G + + D I
Sbjct: 570 LTQLQELDVSGNDIQSVDDI 589
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 178/416 (42%), Gaps = 68/416 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTA-DGIALLSSLQNLSVLD-- 57
+T L LDLS G+ HL S++ L+ LS + +G+ L+SL L + D
Sbjct: 108 LTSLTRLDLSYNQIRKFEGLDHLASLTELD---LSGNQIAKLEGLNALTSLTRLDLSDNQ 164
Query: 58 ---LGGL----PVTDLVLRSLQV--------LTKLEYLDLWGSQVSNRGAAVLKMFPRLS 102
L GL +T+L L Q+ LT L LDL G+Q++ L L+
Sbjct: 165 IAKLEGLDSLTSLTELYLSGNQIAKLEGLDHLTSLTRLDLRGNQIAKLEG--LDHLTSLT 222
Query: 103 FLNLAWTGVTKLPNISSLECLN---LSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
LNL+ + KL + SL L LS I + LEG L ++ L+G I + E
Sbjct: 223 GLNLSGNQIRKLEGLDSLTSLTELYLSGNQI-AKLEGLNALTSLTELYLSGNQ-IAKLEG 280
Query: 160 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
+ + L+ L++S + +S+ L + +L L+LS + I A L LN
Sbjct: 281 LNALTS--LTGLNLSGNQISKLESLASLTSLTRLNLSDNQI------------AKLEGLN 326
Query: 220 ----LSNTRFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
L+ + L G HL +L L L G QI + + + SL +D+S
Sbjct: 327 ALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQI--RKLEGLDSLTSLTQLDLSGNQ 384
Query: 274 IKGFIQQVGAETDL---------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
I ++ + A T L + +L +L +L L L+L Q+ A L L+ L
Sbjct: 385 ISK-LESLNALTSLTELDLSDNQIATLESLASLTSLTELDLSDNQI--AKLEGLNALTSL 441
Query: 325 IHLSLRNASLTDVSLHQLSSLSKLTNLSIR-DAVLTNSGLGSFKPPRSLKLLDLHG 379
L LR + L L L+ LT L +R + + GL S SL LDL G
Sbjct: 442 TGLDLRGNQI--AKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLT---SLTQLDLSG 492
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|228926459|ref|ZP_04089531.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228833283|gb|EEM78848.1| Internalin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 771
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|30261431|ref|NP_843808.1| internalin, partial [Bacillus anthracis str. Ames]
gi|49184263|ref|YP_027515.1| internalin, partial [Bacillus anthracis str. Sterne]
gi|254682509|ref|ZP_05146370.1| internalin, putative [Bacillus anthracis str. CNEVA-9066]
gi|254733925|ref|ZP_05191639.1| internalin, putative [Bacillus anthracis str. Western North America
USA6153]
gi|254740385|ref|ZP_05198076.1| internalin, putative [Bacillus anthracis str. Kruger B]
gi|254753775|ref|ZP_05205810.1| internalin, putative [Bacillus anthracis str. Vollum]
gi|254758872|ref|ZP_05210899.1| internalin, putative [Bacillus anthracis str. Australia 94]
gi|386735134|ref|YP_006208315.1| Internalin [Bacillus anthracis str. H9401]
gi|421507112|ref|ZP_15954033.1| internalin [Bacillus anthracis str. UR-1]
gi|421637928|ref|ZP_16078525.1| internalin [Bacillus anthracis str. BF1]
gi|30255285|gb|AAP25294.1| putative internalin [Bacillus anthracis str. Ames]
gi|49178190|gb|AAT53566.1| internalin, putative [Bacillus anthracis str. Sterne]
gi|384384986|gb|AFH82647.1| Internalin [Bacillus anthracis str. H9401]
gi|401822764|gb|EJT21913.1| internalin [Bacillus anthracis str. UR-1]
gi|403395487|gb|EJY92726.1| internalin [Bacillus anthracis str. BF1]
Length = 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 2 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 54
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 55 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 111
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 112 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 160
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 161 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 209
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 210 --PLSSLVNLQKLDLE 223
>gi|229120968|ref|ZP_04250210.1| Internalin [Bacillus cereus 95/8201]
gi|228662628|gb|EEL18226.1| Internalin [Bacillus cereus 95/8201]
Length = 771
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423387697|ref|ZP_17364949.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
gi|401627891|gb|EJS45747.1| hypothetical protein ICE_05439, partial [Bacillus cereus BAG1X1-2]
Length = 865
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423531450|ref|ZP_17507895.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
gi|402444333|gb|EJV76220.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB1-1]
Length = 1016
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|320164611|gb|EFW41510.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 853
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 53/382 (13%)
Query: 32 LWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
L LS +T + + L L+VL L +T + + + L L LDL + +++
Sbjct: 63 LRLSSNQITGIAPSAFTGLTALTVLSLSYNQITSIPVSAFAGLDALTRLDLSSNLITSIS 122
Query: 92 AAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLAKI 146
A+ L+ LNL +T +P +++L L LSN I SI N L+ +
Sbjct: 123 ASAFPSLTALTELNLQGNLITSIPASLFTGLTALRWLPLSNNQITSIAANAFNG--LSAV 180
Query: 147 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ------------------MK 188
+L +Y++T+ ++ D+S ++ + LT+ +
Sbjct: 181 TL------------IYLQTNQIT--DLSPATFTGLAALTELYLMGNQITSIHASTFAGLT 226
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
+LE+LDL + I + + A L L L + + + AG L LEIL+L G
Sbjct: 227 SLENLDLQDNKITEVPASAFTDLSA-LTGLTLQDNQITEIPASAFAG-LTVLEILNLQGN 284
Query: 249 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSL------------TALQN 296
QI + + + + +L+ +++ + I A+ + SL +
Sbjct: 285 QITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDNNITSIPASVFTG 344
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L+ L L L +++D + ++ L L L++ +T++S + + L+ LT L +
Sbjct: 345 LSALNELKLHTNKITDLSASVFASLTALAVLELQSNQITEISANAFTGLTALTKLDLSSC 404
Query: 357 VLTNSGLGSFKPPRSLKLLDLH 378
+T+ + +F +L+ L LH
Sbjct: 405 QITSFSVDAFTSLTALRDLYLH 426
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 25/252 (9%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++T +++LE L L + +T + + L L+ L L +T++ +
Sbjct: 213 QITSIHASTFAGLTSLENLDLQDNKITEVPASAFTDLSALTGLTLQDNQITEIPASAFAG 272
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNC 128
LT LE L+L G+Q++N V L LNL +T +P ++++L L+L +
Sbjct: 273 LTVLEILNLQGNQITNIPETVFADLTALETLNLQDNQITSIPASAFADLTALRSLDLQDN 332
Query: 129 TIDSILEG--------NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
I SI NE K KI+ + A ++ + L+ L++ ++ ++
Sbjct: 333 NITSIPASVFTGLSALNELKLHTNKIT--------DLSASVFASLTALAVLELQSNQITE 384
Query: 181 FC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
T + AL LDLSS I SV+ + A LR+L L + +S G L
Sbjct: 385 ISANAFTGLTALTKLDLSSCQITSFSVDAFTSLTA-LRDLYLHFNQITSIPASAFTG-LT 442
Query: 239 NLEILSLSGTQI 250
L +L L+ QI
Sbjct: 443 ALYVLILAYNQI 454
>gi|290981770|ref|XP_002673604.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
gi|284087189|gb|EFC40860.1| hypothetical protein NAEGRDRAFT_58930 [Naegleria gruberi]
Length = 494
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 168 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
L++LDVS + +S L+Q+ L HL+++ ++IG + + ++ + LR L + F
Sbjct: 251 LTYLDVSWNYISDEGAKVLSQLSQLTHLNVNCTIIGIEGAKYISKL-TKLRTLIAARNNF 309
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF-------I 278
G + + L L +S I + I Y+S M L ++I++ I F I
Sbjct: 310 WIEGCQYFS-EMEQLTALDVSHNSIGNTGIKYLSKMKQLTELNINDNAINQFGTEESKLI 368
Query: 279 QQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
+++ T L +S +TA+ ++ L LN+ ++ A +S + L L +
Sbjct: 369 RELSQLTKLSISSNNIGIEGVTAISTMSQLRTLNIFFNRIGLAGAKLISGMQNLTVLDIC 428
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
N + ++S + +LT L I ++ N G + K + LK L
Sbjct: 429 NNDIGTNGAKEISKMKQLTKLDIARNMIGNEGAKALKSMKQLKSL 473
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 62/259 (23%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
+S L L+ L++ V + + + +L YLD+ + +S+ GA VL +L+ LN+
Sbjct: 221 ISQLHQLTCLNISSNNVGFNTFKPIGNVKQLTYLDVSWNYISDEGAKVLSQLSQLTHLNV 280
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF------ 160
NCTI I EG + + L K+ T I R F
Sbjct: 281 --------------------NCTIIGI-EGAKYISKLTKLR----TLIAARNNFWIEGCQ 315
Query: 161 LYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLD------------------------ 194
+ E L+ LDVS++S+ +L++MK L L+
Sbjct: 316 YFSEMEQLTALDVSHNSIGNTGIKYLSKMKQLTELNINDNAINQFGTEESKLIRELSQLT 375
Query: 195 ---LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQID 251
+SS+ IG + V ++ + + LR LN+ R AG +++G + NL +L + I
Sbjct: 376 KLSISSNNIGIEGVTAISTM-SQLRTLNIFFNRIGLAGAKLISG-MQNLTVLDICNNDIG 433
Query: 252 DYAISYMSMMPSLKFIDIS 270
+S M L +DI+
Sbjct: 434 TNGAKEISKMKQLTKLDIA 452
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 17 DAGMKHLLSISTLEKL-----WLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL 71
+ G++ + +IST+ +L + + GL G L+S +QNL+VLD+ + + +
Sbjct: 383 NIGIEGVTAISTMSQLRTLNIFFNRIGLA--GAKLISGMQNLTVLDICNNDIGTNGAKEI 440
Query: 72 QVLTKLEYLDLWGSQVSNRGAAVLKMFPRL-----SFLNLAW 108
+ +L LD+ + + N GA LK +L +F N+ W
Sbjct: 441 SKMKQLTKLDIARNMIGNEGAKALKSMKQLKSLRNTFNNIIW 482
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|224113693|ref|XP_002332513.1| predicted protein [Populus trichocarpa]
gi|222832619|gb|EEE71096.1| predicted protein [Populus trichocarpa]
Length = 949
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 23/237 (9%)
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQ-----MKALEHLDLSSSMIGDDSVEMVACVGA 213
A L+ L LD+S++ L CF Q LE L+LS + D S+ +
Sbjct: 99 ASLFFPFRELQSLDLSSTGLVG-CFENQGFEVLSSKLELLNLSDNRFNDKSILSCLTGLS 157
Query: 214 NLRNLNLSNTRFSSA----GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
L++L+LS+ + + + G I + HL LE L LS +D +SY+ SLK +++
Sbjct: 158 TLKSLDLSHNQLTGSASFYGFEIKSSHLRKLENLDLSYNMFNDNILSYLGGFSSLKSLNL 217
Query: 270 SNTDIKGFIQQVGAET-DLVLSLTALQNLN--HLERLNLEQTQVSDATLFPLSTFKELIH 326
S + G G+ +L+ SL L +L L+ NL T +S T F +T +EL
Sbjct: 218 SGNMLLGSTTVNGSRKLELLHSLGVLPSLKTLSLKDTNLSWTSISQETFFNSTTLEELY- 276
Query: 327 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNS----GLGSFKPPRSLKLLDLHG 379
L SL L + +L L LS+ + L ++ GL K +L+ LDL+G
Sbjct: 277 --LDRTSLPINFLQNIGALPALKVLSVGECDLHDTLPAQGLCELK---NLEQLDLYG 328
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|104647025|gb|ABF74136.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 164/361 (45%), Gaps = 48/361 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DLSRC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLSRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + + P+ IS
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEEFPSSIS 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 T 335
T
Sbjct: 390 T 390
>gi|423516081|ref|ZP_17492562.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
gi|401165924|gb|EJQ73234.1| hypothetical protein IG7_01151 [Bacillus cereus HuA2-4]
Length = 766
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLNYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLNYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|299067411|emb|CBJ38610.1| leucine-rich-repeat type III effector protein (GALA6) [Ralstonia
solanacearum CMR15]
Length = 620
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 18/304 (5%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LD S+ + +AG + L + L +L L+ + G+ L+ +L+ LDLGG +
Sbjct: 285 LTSLDASKN-GIGNAGAEALAKNTVLRELNLAHNMIGTPGVRALAGNTSLTELDLGGNRL 343
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNIS 118
D L L L + +++ GA L L+ L+L++ G L +
Sbjct: 344 GDAGALELAGNRSLLSLKVDHNEIGGGGAQALARHATLTSLDLSYNAIGLWGAGALGANT 403
Query: 119 SLECLNLSNCTIDS----ILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+L LNLS C IDS L N++ LA++ L G +I + A + L+ LD+S
Sbjct: 404 TLSVLNLSFCGIDSHSACALACNKS---LAELYLNG-NWIGDYGALELAKNRTLTLLDLS 459
Query: 175 NSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
+ + L +AL L L+ + I DD +A L L+LS R + G
Sbjct: 460 RNGIRNAGAEALGGNQALTSLKLAGNGIDDDGAAALARH-PRLTTLDLSRNRIGAEGARH 518
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 292
LA L L LS +I +S +L +++S+ I + A++ + SL
Sbjct: 519 LA-QSATLAELDLSQNRIGPDGAEALSQSTALITLNVSHNAIGEAGARSLADSASLTSLD 577
Query: 293 ALQN 296
A +N
Sbjct: 578 ARRN 581
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 53 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 110
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 111 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 163
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 164 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 220
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 221 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 274
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 275 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 332
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 333 LTYLTLYFNNISDIS--PVSSLTKL 355
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKL 348
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKL 278
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|449087282|ref|YP_007419723.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|449021039|gb|AGE76202.1| hypothetical protein HD73_0623 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 991
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 347
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|293351022|ref|XP_002727661.1| PREDICTED: similar to toll-like receptor 13 [Rattus norvegicus]
gi|149055554|gb|EDM07138.1| rCG38186 [Rattus norvegicus]
Length = 956
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 152/370 (41%), Gaps = 59/370 (15%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
L NL L L +T + + L KL+YL L +++SN +
Sbjct: 135 FEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLSRNRISNFSGIL------------ 182
Query: 107 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
V LP + L+ +N S +D +P + +SL +F E + S
Sbjct: 183 --EAVQHLPCLEHLDLINNSIMYLD--------HSPRSLVSLTHLSF--EGNNLTELNFS 230
Query: 167 LLSFLDVSNSSLSRF-------CFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNL 218
LS +++N S S+ +L + L+ L+LS +++ +EM++ N+R +
Sbjct: 231 TLSLPNLTNLSASQNGHGVIQDVYLKTLPQLQSLNLSGTVV---KLEMLSAKHLQNVRVM 287
Query: 219 NLSNTRFSSAG-----VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD 273
+LSN V L +LP LEIL + I ++ L F+D+
Sbjct: 288 DLSNRELKHGHLNMKIVCYLLRNLPMLEILFFHKNATNAEGIKQLAKCTRLLFLDL---- 343
Query: 274 IKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 332
G +DLV L+ + L L+RLNL + Q+S + S+ + L L L +
Sbjct: 344 --------GQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHN 395
Query: 333 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTED--AILQ 390
S L +L LS+ +T +F SLK L+L W++T D + Q
Sbjct: 396 KFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQ 455
Query: 391 FCKMHPRIEV 400
F P +EV
Sbjct: 456 F----PNLEV 461
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L ++++L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L ++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNDISDIS--PVSSLTKLQRL 366
>gi|218902536|ref|YP_002450370.1| putative internalin [Bacillus cereus AH820]
gi|218536306|gb|ACK88704.1| putative internalin [Bacillus cereus AH820]
Length = 779
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
>gi|423422719|ref|ZP_17399750.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
gi|401118704|gb|EJQ26533.1| hypothetical protein IE5_00408, partial [Bacillus cereus BAG3X2-2]
Length = 815
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 26/176 (14%)
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
E + FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N
Sbjct: 287 ELEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANN 343
Query: 224 RFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ S+ LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 344 QISNDN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE------ 392
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 --------NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|229183622|ref|ZP_04310845.1| Internalin [Bacillus cereus BGSC 6E1]
gi|228599865|gb|EEK57462.1| Internalin [Bacillus cereus BGSC 6E1]
Length = 771
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|17548893|ref|NP_522233.1| GALA protein [Ralstonia solanacearum GMI1000]
Length = 981
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 240
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 44 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 100
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
E L+++G +I D ++ PSLK ++ ++ I ++ AE+ L
Sbjct: 101 ESLNVAGAEIGDGGARLLAANPSLKSLNAASGGISASGARMLAESPT------------L 148
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 357
E L+L Q + DA L+ + L HL++RN +TD+ L+ L +L + + V
Sbjct: 149 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDLGTRALALNPALVSLDLGNLVTET 208
Query: 358 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
+T G + RSLK L + G L +D + +
Sbjct: 209 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 259
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LDLS C V++AG+ +L + L L LS+TG+ G L++ +L+ L+L G
Sbjct: 579 VRHLDLSGCTGSAVSEAGLAYLARL-PLASLDLSDTGIGNRGAQALAASASLTSLNLSGN 637
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ +L T L LD+ + + N GA L L+ L L TG+ +E
Sbjct: 638 GIGTAGAEALGRNTVLTALDISANPIRNAGAQALAGSRSLTSLELRDTGIED----GGIE 693
Query: 122 CLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L +N + S+ + GN+ ++++ A L+ L + L+
Sbjct: 694 AL-AANTVLRSLDISGND---------------LSDQSAAALAANRTLTSLKANGCGLTN 737
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L ++++L L++ S+ IGD V +A A+LR+LNLS + G+ LA
Sbjct: 738 DMAQQLARIRSLRTLEVGSNSIGDAGVLTIA-RNASLRSLNLSRNPITPQGLYPLA 792
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 45/261 (17%)
Query: 109 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 168
T ++ L N+++L L L N I I + +N L ++ + G T + S+L
Sbjct: 8 TDISPLANLTNLTGLTLFNNQITDI-DALKNLTNLNRLEITGNTIS---------DISVL 57
Query: 169 SFLDVSNSSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
S L +SL + F L + LE LD+SS+ + D SV +A + NL L
Sbjct: 58 SGL----TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLERLI 110
Query: 220 LSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 111 ATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLA 164
Query: 279 QQVGAE--TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLR 330
G T+L L + N++ +E L L + Q+ D + P+S K L +L+L
Sbjct: 165 PLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLALY 222
Query: 331 NASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 223 FNNISDIS--PVSSLTKLQRL 241
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|190410015|ref|YP_001965539.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
gi|125631045|gb|ABN47046.1| probable peroxidase protein [Sinorhizobium meliloti SM11]
Length = 1174
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 41/371 (11%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLP 62
L+E+DLS +V D L + LE+ LS T +GI L + + L++ G P
Sbjct: 825 SLREIDLSHT-RVGDDVAGALGDLRFLEQANLSNTHTMDEGICRLMNAP-IRTLEIYGRP 882
Query: 63 VT---------DLVLRSLQVLTKLEY---------LDLWGSQVSNRGAAVLKMFPRLSFL 104
V + L+S+++ + ++ LD+ + S V + RLS
Sbjct: 883 VAAQGLTAIAQNRTLKSVKLTSDADWTGLAEINAELDMQTPERSE--GRVPQSLRRLSLR 940
Query: 105 NLAWTGVT-KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYI 163
+ + + +L N +L+ L + + D+ E N K L + R + L
Sbjct: 941 GMLTSSLADELGNSQNLKSLGIDSIGADAGFESNFFK--LEDFIAENAGLDDPRISVLLA 998
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
+ S+ + L +S + L + + L+L + + D + M+ + L ++L +T
Sbjct: 999 KPSI-AGLYLSGNPLGKALGGPLSNTIHTLELRETQVSDAEIPMIGKL-PRLHCIDLPHT 1056
Query: 224 RFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
R ++ G+ LAG NL+ L+L GTQ+D ++ M++ P L + + G
Sbjct: 1057 RVTAKGIAELAGMSVNLQSLALDGTQVDTGSVGAMALAPRLLELYL-----------YGD 1105
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
E D AL L L+L T +SD + L+ L LSL +A+L+D +L L
Sbjct: 1106 EVD--TRTIALLGSVRLRELHLLGTNISDDAVPHLAAIAGLRFLSL-DANLSDDALLALR 1162
Query: 344 SLSKLTNLSIR 354
SL +S+R
Sbjct: 1163 SLRPHLLVSLR 1173
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 29/257 (11%)
Query: 35 SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAV 94
+ T LT + L +L +L L L G+PV+D L S + +L LDL G+ VS++G
Sbjct: 689 AATQLTGSIVQWLEALTSLRSLSLRGIPVSDDDLNSTNLWKRLSRLDLSGTAVSDKGVTS 748
Query: 95 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
L +S L+L+ T +T + ++ + +D ++S G
Sbjct: 749 LASAFAISELSLSRTEIT---DEAAAAVFSRPRQAVD---------VSWTQVSQTGIVTG 796
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
EA ++ + LD+ +S S +L +L +DLS + +GDD VA +
Sbjct: 797 QSPEA---LQKGNFAGLDIDDSFAS---WLRAAASLREIDLSHTRVGDD----VAGALGD 846
Query: 215 LRNL---NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI-S 270
LR L NLSNT G+ L + P + L + G + ++ ++ +LK + + S
Sbjct: 847 LRFLEQANLSNTHTMDEGICRLM-NAP-IRTLEIYGRPVAAQGLTAIAQNRTLKSVKLTS 904
Query: 271 NTDIKGFIQQVGAETDL 287
+ D G + ++ AE D+
Sbjct: 905 DADWTG-LAEINAELDM 920
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 168 LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN-LNLSNTR 224
LS LD+S +++S L A+ L LS + I D E A V + R +++S T+
Sbjct: 731 LSRLDLSGTAVSDKGVTSLASAFAISELSLSRTEITD---EAAAAVFSRPRQAVDVSWTQ 787
Query: 225 FSSAGVGILAGHLPN-LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA 283
S GI+ G P L+ + +G IDD S++ SL+ ID+S+T +VG
Sbjct: 788 VSQ--TGIVTGQSPEALQKGNFAGLDIDDSFASWLRAAASLREIDLSHT-------RVGD 838
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSD 312
+ AL +L LE+ NL T D
Sbjct: 839 DV-----AGALGDLRFLEQANLSNTHTMD 862
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|218235426|ref|YP_002365348.1| internalin protein [Bacillus cereus B4264]
gi|218163383|gb|ACK63375.1| internalin protein [Bacillus cereus B4264]
Length = 994
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N + S+
Sbjct: 289 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANNQISN 345
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 346 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 390
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 391 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEICDV 436
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|218187578|gb|EEC70005.1| hypothetical protein OsI_00548 [Oryza sativa Indica Group]
Length = 1018
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 149/369 (40%), Gaps = 51/369 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L L SRC +T + L ++ L KL L E + +S+ NLS L L
Sbjct: 407 LTSLTILQFSRC-GLTGSIPSFLGKLTKLRKLVLYECNFSGKLPQHISNFTNLSTLFLNS 465
Query: 61 LP-VTDLVLRSLQVLTKLEYLDLWGSQ---VSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
V + L SL L L YLD+ + V + + P+L L L+ +TK P+
Sbjct: 466 NNLVGTMKLASLWGLQHLRYLDISDNNLVVVDGKVNSSSTHIPKLQILALSGCNITKFPD 525
Query: 117 I----SSLECLNLSNCTIDSILEG----NENKAPLAKISLAGTTFI-------------- 154
L L+LS I + + N + +A + LA F
Sbjct: 526 FLRSQDELLWLDLSKNQIHGAIPSWAWESWNDSGVASLILAHNKFTSVGSNPFIPLQIDW 585
Query: 155 -----NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
N E + I FLD SN+ S F L H+ L ++ + S E+
Sbjct: 586 LDLSNNMFEGTIPIPQGSARFLDYSNNMFSSIPF-NFTAHLSHVTLFNAPGNNFSGEIPP 644
Query: 210 --CVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
C L+ L+LSN FS + L ++ ++IL+L+ Q+D + S +
Sbjct: 645 SFCTATELQYLDLSNNNFSGSIPSCLIENVNGIQILNLNANQLDGEIPDTIKEGCSFHAL 704
Query: 268 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELI 325
S I+G L SL A QN LE L+ + Q++D +FP +S + L
Sbjct: 705 YFSGNRIEG---------QLPRSLLACQN---LEILDAGKNQIND--IFPCWMSKLRRLQ 750
Query: 326 HLSLRNASL 334
L L++ L
Sbjct: 751 VLVLKSNKL 759
>gi|194750965|ref|XP_001957800.1| GF23837 [Drosophila ananassae]
gi|190625082|gb|EDV40606.1| GF23837 [Drosophila ananassae]
Length = 703
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 170/410 (41%), Gaps = 47/410 (11%)
Query: 7 LDLSRCVKVTDAGM--KHLLSISTLEKL----WLS------ETGLTADGIALLSSLQNLS 54
+DL C + +A + + S L + W S +TGL + A L +L L
Sbjct: 187 IDLQECENLGNASYLCREIESFEQLSRYVGKNWRSVKIVNEQTGLDNEFEAKLPALSGLI 246
Query: 55 VLDL---GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
LDL GG+ LQ T+L+ L+L Q+ + ++ L++++ +
Sbjct: 247 RLDLSKSGGVTFNG---NGLQDFTELQELNLTSCQLEELQEQHFPIGSKIVNLDVSFNDI 303
Query: 112 T-----KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETS 166
K+ ++SL N SN I I E N + L TT NE+E E +
Sbjct: 304 QLITGQKMSRLASLVYGNFSNNLIAEI-EPNSFRDMKNLRFLDFTT--NEQENITLGENA 360
Query: 167 LLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
L +L +SN+++ F C L + LE L L S+ + + + + + L+ LN+SN
Sbjct: 361 NLQYLSISNNNVRDFHWCRLRGLPKLEELHLHSNWLENLDIGIFYHL-PKLQVLNVSNNN 419
Query: 225 FSSAGVGILAGH---LPNLEILSLSGTQIDDYAISYMSMMPSLKFID-----ISNTDIKG 276
+ G +P LE+L S + S + +LK ++ I+ +
Sbjct: 420 LYEINRPLFMGPKDPMP-LELLDYSSNNVKVLEDSVFCRLGNLKTLNLWLNLINKIHPRA 478
Query: 277 FIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSD--ATLFPLSTFKELIHL 327
F+ Q+ +L NL LER++L + + A +F + + L
Sbjct: 479 FVGLTSLQSLQLQGNKISILPDDVFANLTSLERIDLSRNNIKKLGARVFGDTLLRHFTML 538
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L N ++ D+ LSSL L L ++ L + + F P R L+ L L
Sbjct: 539 DLSNNNIMDLHPLALSSLPFLMELRLKRNRLVSLDIRLFAPMRRLQFLTL 588
>gi|443316011|ref|ZP_21045475.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442784393|gb|ELR94269.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 437
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 57/320 (17%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
++ L S++ LE L+L +T I L L NL+ L L G V D+ + L LT LE+
Sbjct: 117 IQPLASLTKLESLFLESNQIT--NIQSLGGLHNLTWLSLSGNQVVDV--QPLSNLTGLEW 172
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN-- 137
L L +Q+ + A L L L L++ + ++ +S+LE L + L GN
Sbjct: 173 LFLDDNQIVD--VAPLATLQNLERLLLSYNQIVEIGALSALEKLQ------NLYLNGNQI 224
Query: 138 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
E+ PL+ + R L++L++ + + L ++ L L L
Sbjct: 225 EDVQPLSGL----------RN---------LAWLELKENQVMNIQPLADLENLRWLGLDD 265
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 257
+ I D V+ +A + + L+NL L+ + + V LA L NLE L L QI D I
Sbjct: 266 NQIVD--VQPLAAL-STLKNLYLNGNQITD--VSSLAA-LTNLESLVLGDNQIVD--IQS 317
Query: 258 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
+S++ +L F+ +S I ++++ L L LERL L Q+ D P
Sbjct: 318 LSLLENLTFLVLSGNQI--------------VNVSPLSALVRLERLGLNDNQIQDVQ--P 361
Query: 318 LSTFKELIHLSLRNASLTDV 337
L+T L L L N + DV
Sbjct: 362 LATLTNLSVLVLSNNQIVDV 381
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLAGLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290972233|ref|XP_002668860.1| predicted protein [Naegleria gruberi]
gi|284082393|gb|EFC36116.1| predicted protein [Naegleria gruberi]
Length = 296
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
+++ + L HL ++ + IGD+ + + + L +L++ + + S GV + G L NL
Sbjct: 69 YISSLNQLTHLSININNIGDEGAKYIGQI-KQLTDLSICDNKIGSEGVKYI-GQLKNLLK 126
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDLVLS-------- 290
L +S +I D ++S M L +DIS+ +I +I ++ DL++S
Sbjct: 127 LYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHLIDLMISDNNIDSMG 186
Query: 291 --------LTALQNLNH------------LERL-NLE--QTQVSDATLFPLSTFKELIHL 327
LT+L+ N+ +E+L NLE + ++ D + LS K+L L
Sbjct: 187 AKHISQMKLTSLEVYNNTIDVEGAKYLSEMEQLTNLEISKNEIGDKGVQFLSGMKQLTSL 246
Query: 328 SLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ ++DV + + L +LS+ D ++ + + + L LD+
Sbjct: 247 DINENKISDVGAKYILEMKNLIDLSVFDNEISEDIIERLREMKQLTYLDI 296
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 50/334 (14%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L L + + +G +S L N+S LD+ G + + + + +L L ++ +
Sbjct: 4 LTNLNVRHNDIDEEGAKYISELMNVSTLDISGNSINKRGAKYIGEMKQLTDLGMYCCSIG 63
Query: 89 NRGAAVLKMFPRLSFL-----NLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPL 143
G + +L+ L N+ G + I L +LS C
Sbjct: 64 VEGTKYISSLNQLTHLSININNIGDEGAKYIGQIKQL--TDLSICD-------------- 107
Query: 144 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
KI G +I + + L + S D + F+++M L LD+SS I
Sbjct: 108 NKIGSEGVKYIGQLKNLLKLYVSCNEIGD------NGAQFISEMNQLTKLDISSVNITPI 161
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS--GTQIDDYAISYMSMM 261
++ ++ + +L +L +S+ S G A H+ +++ SL ID Y+S M
Sbjct: 162 GIKYISKM-EHLIDLMISDNNIDSMG----AKHISQMKLTSLEVYNNTIDVEGAKYLSEM 216
Query: 262 PSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLS 319
L ++IS +I KG + L + L L++ + ++SD +
Sbjct: 217 EQLTNLEISKNEIGDKG--------------VQFLSGMKQLTSLDINENKISDVGAKYIL 262
Query: 320 TFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
K LI LS+ + +++ + +L + +LT L I
Sbjct: 263 EMKNLIDLSVFDNEISEDIIERLREMKQLTYLDI 296
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 56/261 (21%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ D G K++ I L L + + + ++G+ + L+NL
Sbjct: 86 IGDEGAKYIGQIKQLTDLSICDNKIGSEGVKYIGQLKNL--------------------- 124
Query: 75 TKLEYLDLWGS--QVSNRGAAVLKMFPRLSFLNLAWTGVT--KLPNISSLECLNLSNCTI 130
L L+ S ++ + GA + +L+ L+++ +T + IS +E L I
Sbjct: 125 -----LKLYVSCNEIGDNGAQFISEMNQLTKLDISSVNITPIGIKYISKMEHL------I 173
Query: 131 DSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMK 188
D ++ N + AK +I L+ L+V N+++ +L++M+
Sbjct: 174 DLMISDNNIDSMGAK----------------HISQMKLTSLEVYNNTIDVEGAKYLSEME 217
Query: 189 ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
L +L++S + IGD V+ ++ + L +L+++ + S G + + NL LS+
Sbjct: 218 QLTNLEISKNEIGDKGVQFLSGM-KQLTSLDINENKISDVGAKYIL-EMKNLIDLSVFDN 275
Query: 249 QIDDYAISYMSMMPSLKFIDI 269
+I + I + M L ++DI
Sbjct: 276 EISEDIIERLREMKQLTYLDI 296
>gi|228932710|ref|ZP_04095583.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228826968|gb|EEM72729.1| Internalin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 760
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 83
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 84 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 136
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 137 SSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 193
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 194 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 247
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 248 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 305
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 306 LTYLTLYFNNISDIS--PVSSLTKL 328
>gi|290984835|ref|XP_002675132.1| predicted protein [Naegleria gruberi]
gi|284088726|gb|EFC42388.1| predicted protein [Naegleria gruberi]
Length = 259
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 143 LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMI 200
L +S++ NE A L + + L LDV S + ++QM L +LD+ + +
Sbjct: 4 LTSLSISRNQIGNEGAALLS-QLTKLKKLDVGTSHIGNQGAKSISQMSQLTYLDICKNPL 62
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
G + VE ++ NL LN+S ++AG +++ L NL L++ +I + I +
Sbjct: 63 GIEGVESISTNLKNLTFLNMSYNNINTAGAKLIS-QLENLTELNVGCNEIHNDGIDSICK 121
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
+ L +DI + T S+ L L +L LN+ V+ +
Sbjct: 122 LKLLTSLDIQ------------SNTFHASSVKCLGELQNLRLLNIGYNHVTPDLAKCIGE 169
Query: 321 FKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
KEL +L++R + D + ++S L KLT L + L++ G
Sbjct: 170 LKELTYLNIRFNYVGDEGMKEISKLKKLTFLDVAQNGLSSEG 211
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L EL++ C ++ + G+ + + L L + A + L LQNL +L++G V
Sbjct: 101 LTELNVG-CNEIHNDGIDSICKLKLLTSLDIQSNTFHASSVKCLGELQNLRLLNIGYNHV 159
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT 112
T + + + L +L YL++ + V + G + +L+FL++A G++
Sbjct: 160 TPDLAKCIGELKELTYLNIRFNYVGDEGMKEISKLKKLTFLDVAQNGLS 208
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 50/249 (20%)
Query: 26 ISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS 85
+ L L +S + +G ALLS LTKL+ LD+ S
Sbjct: 1 MENLTSLSISRNQIGNEGAALLSQ------------------------LTKLKKLDVGTS 36
Query: 86 QVSNRGAAVLKMFPRLSFLNLAWT--GVTKLPNISSLECLNLSNCTIDSILEGNENKAPL 143
+ N+GA + +L++L++ G+ + +IS+ NL N T ++ N
Sbjct: 37 HIGNQGAKSISQMSQLTYLDICKNPLGIEGVESIST----NLKNLTFLNMSYNN------ 86
Query: 144 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
I+ AG I++ E + + ++ N + C ++K L LD+ S+
Sbjct: 87 --INTAGAKLISQLENLTELN---VGCNEIHNDGIDSIC---KLKLLTSLDIQSNTFHAS 138
Query: 204 SVEMVACVGANLRNLNLSNTRFS--SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMM 261
SV+ C+G L+NL L N ++ + + G L L L++ + D + +S +
Sbjct: 139 SVK---CLGE-LQNLRLLNIGYNHVTPDLAKCIGELKELTYLNIRFNYVGDEGMKEISKL 194
Query: 262 PSLKFIDIS 270
L F+D++
Sbjct: 195 KKLTFLDVA 203
>gi|228945027|ref|ZP_04107388.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228814696|gb|EEM60956.1| Internalin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 771
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 231 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 283
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 284 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 340
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 341 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 389
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 390 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 438
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 439 --PLSSLVNLQKLDLE 452
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290981165|ref|XP_002673301.1| predicted protein [Naegleria gruberi]
gi|284086884|gb|EFC40557.1| predicted protein [Naegleria gruberi]
Length = 357
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 35/214 (16%)
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECLNLSNCTID 131
L +L YL++ + + + GA + L+FL++ ++ L N S+ E +L++ I+
Sbjct: 161 LRQLTYLNIGNNDIGDEGAKHISQLKLLTFLDVYENRISNVGLVNFSN-ELQHLTHLNIN 219
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKA 189
S +I +A L IE L+ L++ ++SL ++++MK
Sbjct: 220 S-------------------NYIFSDDAKLLIEMKQLTHLNIGDNSLQEEGAKWISEMKQ 260
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS---LS 246
L++L++S ++I + ++ + C NL LN+S G+ LPNLE L+ +S
Sbjct: 261 LKYLNISRNLIRSEGMKYI-CELTNLTTLNVSQNSIKDKGI----EKLPNLEKLTELNIS 315
Query: 247 GTQIDDYAISYMSMMPSLKFIDI---SNTDIKGF 277
I + ++ + L F+D+ D+KGF
Sbjct: 316 YNNISNKGAKLINELKQLTFLDMDCNEGGDMKGF 349
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 49/90 (54%)
Query: 17 DAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTK 76
+ G K + + L+ L +S + ++G+ + L NL+ L++ + D + L L K
Sbjct: 249 EEGAKWISEMKQLKYLNISRNLIRSEGMKYICELTNLTTLNVSQNSIKDKGIEKLPNLEK 308
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
L L++ + +SN+GA ++ +L+FL++
Sbjct: 309 LTELNISYNNISNKGAKLINELKQLTFLDM 338
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 186 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 245
Q++ L +L++ ++ IGD+ + ++ + L L++ R S+ G+ + L +L L++
Sbjct: 160 QLRQLTYLNIGNNDIGDEGAKHISQLKL-LTFLDVYENRISNVGLVNFSNELQHLTHLNI 218
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL 305
+ I + M L ++I + + Q+ GA+ + + L+ LN+
Sbjct: 219 NSNYIFSDDAKLLIEMKQLTHLNIGDNSL----QEEGAK--------WISEMKQLKYLNI 266
Query: 306 EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS 365
+ + + + L L++ S+ D + +L +L KLT L+I ++N G
Sbjct: 267 SRNLIRSEGMKYICELTNLTTLNVSQNSIKDKGIEKLPNLEKLTELNISYNNISNKGAKL 326
Query: 366 FKPPRSLKLLDL 377
+ L LD+
Sbjct: 327 INELKQLTFLDM 338
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 26 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 83
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 84 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 136
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 137 SSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 193
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 194 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 247
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 248 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 305
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 306 LTYLTLYFNNISDIS--PVSSLTKL 328
>gi|46447568|ref|YP_008933.1| hypothetical protein pc1934 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401209|emb|CAF24658.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 261
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQNLSVLDLG 59
+T L+ LDLS C+ +TD G+ HL ++ L+ L LS LT G+A L+ L L L L
Sbjct: 100 LTSLQHLDLSNCMNLTDDGLVHLTPLTALQHLVLSGCDNLTDAGLAHLTPLTALQTLGLR 159
Query: 60 GLP--VTDLVLRSLQVLTKLEYLDL-WGSQVSNRGAAVLKMFPRLSFLNLAW------TG 110
+T L L LT L+ LDL + + + G A L L L L W G
Sbjct: 160 RWCQNLTGDGLAHLAPLTALQTLDLSYCKNLKDAGLAHLTPLTALQTLGLKWCSKLTDAG 219
Query: 111 VTKLPNISSLECLNLSNC 128
+ L +++L+ L+LS+C
Sbjct: 220 LAHLKPLAALQHLDLSHC 237
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 19/210 (9%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE----TGLTADGIALLSSLQNLSVLDLG 59
L+ L+LSRC ++TDAG+ HL ++ L+ L LS T +ALL++LQ+L++ +
Sbjct: 28 LQHLNLSRCSRLTDAGLAHLTPLTALQHLGLSYCENLTDAGLAHLALLTALQDLALANCK 87
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGAAVLKMFPRLSFL------NLAWTGVT 112
L TD+ L L LT L++LDL +++ G L L L NL G+
Sbjct: 88 HL--TDVGLVHLTPLTSLQHLDLSNCMNLTDDGLVHLTPLTALQHLVLSGCDNLTDAGLA 145
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI-NEREAFLYIETSLLSFL 171
L +++L+ L L + +G + APL + ++ N ++A L T L +
Sbjct: 146 HLTPLTALQTLGLRRWCQNLTGDGLAHLAPLTALQTLDLSYCKNLKDAGLAHLTPLTALQ 205
Query: 172 DVSNSSLSR-----FCFLTQMKALEHLDLS 196
+ S+ L + AL+HLDLS
Sbjct: 206 TLGLKWCSKLTDAGLAHLKPLAALQHLDLS 235
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + L +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLEL 115
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|228914000|ref|ZP_04077622.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228845605|gb|EEM90634.1| Internalin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 779
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 239 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 291
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 292 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 348
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 349 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 397
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 398 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 446
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 447 --PLSSLVNLQKLDLE 460
>gi|95108203|emb|CAD17823.3| lrr-gala family type III effector protein (gala 2) [Ralstonia
solanacearum GMI1000]
Length = 1035
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA---GVGILAGHLPNL 240
L+ ++ HL+ S + GD ++ + + LR+L+LS S+ + LAG LP L
Sbjct: 98 LSGLRDHPHLE-SVHLKGDFTLADLKALPTTLRHLDLSECTGSAKSFRAIAYLAG-LP-L 154
Query: 241 EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHL 300
E L+++G +I D ++ PSLK ++ ++ I ++ AE+ L
Sbjct: 155 ESLNVAGAEIGDGGARLLAANPSLKSLNAASGGISASGARMLAESPT------------L 202
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAV--- 357
E L+L Q + DA L+ + L HL++RN +TD+ L+ L +L + + V
Sbjct: 203 ESLDLTQNAIGDAGAQALAGSRSLRHLAVRNGLVTDLGTRALALNPALVSLDLGNLVTET 262
Query: 358 ---------------LTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCK 393
+T G + RSLK L + G L +D + +
Sbjct: 263 GNQVEQDGYDKTANNITAQGAWALAQNRSLKSLSVQGNDLCGDDGVRALAR 313
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 4 LKELDLSRCV--KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
++ LDLS C V++AG+ +L + L L LS+TG+ G L++ +L+ L+L G
Sbjct: 633 VRHLDLSGCTGSAVSEAGLAYLARL-PLASLDLSDTGIGNRGAQALAASASLTSLNLSGN 691
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLE 121
+ +L T L LD+ + + N GA L L+ L L TG+ +E
Sbjct: 692 GIGTAGAEALGRNTVLTALDISANPIRNAGAQALAGSRSLTSLELRDTGIED----GGIE 747
Query: 122 CLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
L +N + S+ + GN+ ++++ A L+ L + L+
Sbjct: 748 AL-AANTVLRSLDISGND---------------LSDQSAAALAANRTLTSLKANGCGLTN 791
Query: 181 FCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
L ++++L L++ S+ IGD V +A A+LR+LNLS + G+ LA
Sbjct: 792 DMAQQLARIRSLRTLEVGSNSIGDAGVLTIA-RNASLRSLNLSRNPITPQGLYPLA 846
>gi|229090382|ref|ZP_04221625.1| Internalin [Bacillus cereus Rock3-42]
gi|228692965|gb|EEL46683.1| Internalin [Bacillus cereus Rock3-42]
Length = 760
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 220 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 272
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 273 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 329
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 330 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 378
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 379 ---------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKDIT 427
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 428 --PLSSLVNLQKLDLE 441
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 45/261 (17%)
Query: 109 TGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLL 168
T ++ L N+++L L L N I I + +N L ++ + G T + S+L
Sbjct: 132 TDISPLANLTNLTGLTLFNNQITDI-DALKNLTNLNRLEITGNTIS---------DISVL 181
Query: 169 SFLDVSNSSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 219
S L +SL + F L + LE LD+SS+ + D + ++A + NL L
Sbjct: 182 SGL----TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLERLI 234
Query: 220 LSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 235 ATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTSLDVANNQISNLA 288
Query: 279 QQVGAE--TDLVLSLTALQNLNHLE------RLNLEQTQVSDATLFPLSTFKELIHLSLR 330
G T+L L + N++ +E L L + Q+ D + P+S K L +L+L
Sbjct: 289 PLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLED--ISPISNLKNLTYLALY 346
Query: 331 NASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 347 FNNISDIS--PVSSLTKLQRL 365
>gi|423507131|ref|ZP_17483714.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
gi|402444993|gb|EJV76870.1| hypothetical protein IG1_04688, partial [Bacillus cereus HD73]
Length = 800
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 26/176 (14%)
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 223
E + FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + LR L ++N
Sbjct: 287 ELEHIEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LRTLTVANN 343
Query: 224 RFSSAGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ S+ LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 344 QISNDN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE------ 392
Query: 282 GAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 --------NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|407410013|gb|EKF32614.1| hypothetical protein MOQ_003536 [Trypanosoma cruzi marinkellei]
Length = 835
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 22/196 (11%)
Query: 210 CVGANLRNLNLSNTRFSSAGVGIL--AGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 267
C +LR L+LS T SA + +L L L + S SG + +S++ + SLK +
Sbjct: 378 CALTSLRFLDLSKTHVRSADLQLLTVCQRLEELHVASCSGVK----DVSFVEGLLSLKHL 433
Query: 268 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNL------------EQTQVSDATL 315
D+++T IK Q L+ +LQ+ L ++ E T+V DA +
Sbjct: 434 DLTDTSIKDAGTQ-SLRKCTALTFLSLQDCRFLTDIHFVEPLNNLLSLNLEGTEVVDANI 492
Query: 316 FPLSTFKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKL 374
PL +L LSLR+ LTDV L L L +L + +T+ G+ SL+
Sbjct: 493 IPLMHCTKLELLSLRHCLFLTDVRC--LRELKALKSLDLSGTYVTDEGISDVSQCISLER 550
Query: 375 LDLHGGWLLTEDAILQ 390
+DL L+T L+
Sbjct: 551 IDLSECCLITHFEFLR 566
>gi|83749484|ref|ZP_00946474.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
inhibitor (RI)-like subfamily. [Ralstonia solanacearum
UW551]
gi|83723838|gb|EAP71026.1| cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease
inhibitor (RI)-like subfamily. [Ralstonia solanacearum
UW551]
gi|332322076|gb|AEE41039.1| GALA4 type III effector [Ralstonia solanacearum]
Length = 460
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 56/287 (19%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 42
L+ELDLS C +T G+ HLL++ L++L +S L AD
Sbjct: 144 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCELNADSARLLAGHPTLTTLNLRRNA 202
Query: 43 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
G+A + + L+ L++ + + +R+L T + LD+ +++ + GA L
Sbjct: 203 IGDAGVAAFARNKKLTTLNVSSNGIGPVGVRALAANTTITTLDISNNEIGDEGARALASN 262
Query: 99 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 138
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 263 TALTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLHACGNE 322
Query: 139 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
A++ A TT I A + + L L++SN+ + R
Sbjct: 323 LGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGK 382
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L LDLS++ IGD + +++A L LN+ + R G LAG+
Sbjct: 383 LTTLDLSNNQIGDTAAQVLA-ASHTLTTLNVGSNRIGDTGACALAGN 428
>gi|302793791|ref|XP_002978660.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
gi|300153469|gb|EFJ20107.1| hypothetical protein SELMODRAFT_109190 [Selaginella moellendorffii]
Length = 735
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 156/373 (41%), Gaps = 68/373 (18%)
Query: 26 ISTLEKLWLSE---TGLTADGIALLSSLQNLSVLDLG-----GLPVTDLVLRSLQVLTKL 77
+S+LE W SE TG +G A L+NL+VL+L GLP L +L +
Sbjct: 355 LSSLEVFWASENLLTGRVPEGFA--RGLKNLTVLELSMNNLTGLPTNMAKLVNLNGV--- 409
Query: 78 EYLDLWGSQVSNRGA-AVLKMFPRLSFLNLAWTGVT-KLPN-ISSLECLNLSNCTIDSIL 134
YLD + + + A + L P LS ++L+ + +P+ +S L LN+ ++D +
Sbjct: 410 -YLD--NNDIRSFDAISGLATLPELSTISLSRCKLQGPIPSCLSHLRTLNVHGNSMDGSI 466
Query: 135 EGNENK-------------------APLAKIS-------LAGTTFINEREAFLYIETSLL 168
K A LA+++ L+G F + + TSL
Sbjct: 467 PSTFGKLLRLEVLDLGSNFFSGALPASLAQLASTLRTLDLSGYRFEGPFPSVIGKLTSLR 526
Query: 169 SFL----DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
+ D S S+ FL +K L L+L S S+ NL+ L+LS+
Sbjct: 527 KLILERADASAGSIP--SFLANLKNLTVLNLQGSWF-TGSIPSSLSKLKNLQTLDLSDGF 583
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
+ + G L NLE L LSGT+ + +P L+F+DISNT + I
Sbjct: 584 RLTGSIPAFLGSLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIP----- 638
Query: 285 TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL-RNASLTDV---SLH 340
L L LE L + T+ + L K+L L L +NA + S
Sbjct: 639 -------VELGKLTSLETLRISGTKAAGRIPDTLGNLKKLKVLELSQNAGMRGPIPSSFG 691
Query: 341 QLSSLSKLTNLSI 353
QLSSL +L+ SI
Sbjct: 692 QLSSLKELSVSSI 704
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 129/291 (44%), Gaps = 21/291 (7%)
Query: 100 RLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA-PLAKISLAGTTFINERE 158
+L L L T +L ++S L LN+ ++D + K L + L F
Sbjct: 71 KLESLGLTGTLSPELGSLSHLRTLNVHGNSMDGPIPSTFGKLLRLEVLDLGSNFFSGALP 130
Query: 159 AFLYIETSLLSFLDVSN--SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
A L S L LD+S S+ S FL ++ L L+L S S+ NL+
Sbjct: 131 ASLAQLASTLQTLDLSADASAGSIPSFLANLENLTILNLQGSWF-TGSIPSSLSKLKNLQ 189
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
L+LS+ + + G L NLE L LSGT+ + +P L+F+DISNT +
Sbjct: 190 TLDLSDGLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSS 249
Query: 277 FIQ-QVGAETDL-VLSLTA----------LQNLNHLERLNLEQTQVSDATLFPLSTFKEL 324
I ++G T L L ++ L NL L+ L L Q + S+F +L
Sbjct: 250 SIPVKIGKLTSLETLRISGTKAAGRIPDTLGNLKKLKVLELSQNAGMRGPI--PSSFGQL 307
Query: 325 IHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
L + S T ++ SSL +L+ L ++ V++NS GS P SL LL
Sbjct: 308 SSLEELSVSSTGLTGQIPSSLGQLSRL-VKLDVMSNSLSGSI--PESLGLL 355
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG- 59
+T L++L L R + L ++ L L L + T + LS L+NL LDL
Sbjct: 522 LTSLRKLILERADASAGSIPSFLANLKNLTVLNLQGSWFTGSIPSSLSKLKNLQTLDLSD 581
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KL 114
G +T + L L LEYLDL G++ S L P+L FL+++ T V+ +L
Sbjct: 582 GFRLTGSIPAFLGSLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLDISNTLVSSSIPVEL 641
Query: 115 PNISSLECLNLSN 127
++SLE L +S
Sbjct: 642 GKLTSLETLRISG 654
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 47 LSSLQNLSVLDLG-GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLN 105
LS L+NL LDL GL +T + L L LEYLDL G++ S L P+L FL+
Sbjct: 182 LSKLKNLQTLDLSDGLRLTGSIPAFLGGLQNLEYLDLSGTKFSGSIPPSLGNLPKLRFLD 241
Query: 106 LAWTGVT-----KLPNISSLECLNLSN 127
++ T V+ K+ ++SLE L +S
Sbjct: 242 ISNTLVSSSIPVKIGKLTSLETLRISG 268
>gi|421897505|ref|ZP_16327873.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
solanacearum MolK2]
gi|206588711|emb|CAQ35674.1| lrr-gala family type III effector protein (gala 4) [Ralstonia
solanacearum MolK2]
Length = 460
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 56/287 (19%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 42
L+ELDLS C +T G+ HLL++ L++L +S L AD
Sbjct: 144 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCELNADSARLLAGHPTLTTLNLRRNA 202
Query: 43 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
G+A + + L+ L++ + + +R+L T + LD+ +++ + GA L
Sbjct: 203 IGDAGVAAFARNKKLTTLNVSSNGIGPVGVRALAANTTITTLDISNNEIGDEGARALASN 262
Query: 99 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 138
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 263 TALTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLHACGNE 322
Query: 139 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
A++ A TT I A + + L L++SN+ + R
Sbjct: 323 LGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGK 382
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L LDLS++ IGD + +++A L LN+ + R G LAG+
Sbjct: 383 LTTLDLSNNQIGDTAAQVLA-ASHTLTTLNVGSNRIGDTGACALAGN 428
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 57/296 (19%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIGDI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----------QVGAETDLVLSLTALQ 295
+G Q+ D I ++ + +L +D++N I ++GA + + +++ L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGA--NQISNISPLA 229
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 230 GLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|196229523|ref|ZP_03128388.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
gi|196226755|gb|EDY21260.1| hypothetical protein CfE428DRAFT_1553 [Chthoniobacter flavus
Ellin428]
Length = 582
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 139/353 (39%), Gaps = 44/353 (12%)
Query: 34 LSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAA 93
L ET LT A+L SL + L L G V D V+ L+ L+ L L G++ S G A
Sbjct: 215 LDETPLTTADYAILDSLSEVPELTLSGTAVKDSVMEKLRPFHTLKSLTLNGAKPSPAGYA 274
Query: 94 VLKMFPRLSFLNLAWTGVTKLPNISSLEC-----LNLSNCTI-DSILEGNENKAPLAKIS 147
VL P L L L T + +C L L+N TI D+ L +I
Sbjct: 275 VLPSLPELRDLQLNDTDTKDEAMKTVFQCRKLQHLRLANLTITDAAFADIGKLTALEEIG 334
Query: 148 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQM-------KALEHLDLSSSMI 200
L I + E L + L F L+ M K LE + + ++ +
Sbjct: 335 LTALDKIGSPAFAHFPECRALKRV-----YLGGFIVLSGMIENLGKCKDLEAITMPAAGL 389
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMS 259
D V + + L++L+LSN+ + A + H L LSLS ++D +
Sbjct: 390 KDADVAPLGTL-MKLKSLDLSNSAVTGAFIDSWQQH-SQLTSLSLSNAAGVNDSTCKEIE 447
Query: 260 -MMPSLKFIDISNTDIKGF------------------IQQVGAETDLVLSLTALQNLNHL 300
P L+ + + GF + G D V L+ + L
Sbjct: 448 HTFPKLEQLTV-KIAASGFSSEGVAALARLRALRSVRFEGDGFNDDCVSELSHCETLTS- 505
Query: 301 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L++ + Q+++A + L+ + L LSL +TDV++ + L N+ I
Sbjct: 506 --LSIVKAQLTEAGVVALARYPHLADLSLNYPPITDVAMKAFARCKDLKNIRI 556
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNHITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|229154996|ref|ZP_04283110.1| Internalin [Bacillus cereus ATCC 4342]
gi|228628554|gb|EEK85267.1| Internalin [Bacillus cereus ATCC 4342]
Length = 766
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 390
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 391 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 437
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|163939236|ref|YP_001644120.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
gi|163861433|gb|ABY42492.1| NEAr transporter [Bacillus weihenstephanensis KBAB4]
Length = 766
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|390443606|ref|ZP_10231395.1| hypothetical protein A3SI_05724 [Nitritalea halalkaliphila LW7]
gi|389666402|gb|EIM77853.1| hypothetical protein A3SI_05724 [Nitritalea halalkaliphila LW7]
Length = 626
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
L I+ L+ L + E L +A +S L+ L +D+ + DL + +T LEYLD
Sbjct: 28 ELYKIANLDSLIIRENPLIT-SLAPISVLRELKYIDMSRTEIEDL--GPISNVTYLEYLD 84
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGV---TKLPNISSLECLNLSNCTIDSILEGNE 138
+ G+QV R LK RL LN++ T V ++L N+ +LE L + S N
Sbjct: 85 ISGAQV--RDLQFLKYSDRLKALNISDTRVDDISELGNLKNLEVLRAERTPVVSFSVLNS 142
Query: 139 NKAPLAKISLAGTTFINEREAFLYI-ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 197
A L K+ L + F N F +I E L LD + L F + ++ L+ LDL
Sbjct: 143 FTA-LRKLYLRESGFNN----FEHIQELKQLEILDAGKNFLINFDLIASLEGLQELDLRE 197
Query: 198 SMIGD 202
+ + D
Sbjct: 198 TNLVD 202
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 22 HLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLD 81
HL I+ KL + T + + +A L NL L + P+ DL LQ T LE L
Sbjct: 457 HLHRITAQHKLQIERTRV--EDLAPLEVFNNLRSLHVFDAPLYDL--SHLQHFTLLEELQ 512
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISS---LECLNLSNCTIDSILEGNE 138
L SQV + + L RL L+L+ TG++ L +++ LE LN+S + + L G E
Sbjct: 513 L--SQVPLQDLSPLLSLGRLKSLDLSNTGISDLRELTAFPQLERLNISGTNVKN-LRGVE 569
Query: 139 NKAPLAKISLAGTT 152
+ L +I LA TT
Sbjct: 570 SLLELREIDLANTT 583
>gi|376265270|ref|YP_005117982.1| internalin [Bacillus cereus F837/76]
gi|364511070|gb|AEW54469.1| internalin, putative [Bacillus cereus F837/76]
Length = 759
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 385
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 386 -----------DLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDIVMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|168185063|ref|ZP_02619727.1| ABC transporter permease protein [Clostridium botulinum Bf]
gi|182671889|gb|EDT83850.1| ABC transporter permease protein [Clostridium botulinum Bf]
Length = 1355
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 176/405 (43%), Gaps = 65/405 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
+KELD G++++ + LEKL LS T + I+LL L NL +++ +
Sbjct: 357 IKELDFHNAHIEKLNGIENM---TALEKLNLSGTDIK--DISLLKCLINLKEVNISNTSI 411
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+D+ +L+ + YL+L + V+ V++ F + L ++ T + +P +SSL L
Sbjct: 412 SDIT--ALKNSIYIRYLNLNETNVTT--LQVIEKFQYIERLYVSGTKINTVPQLSSLLEL 467
Query: 124 NLSNCTIDSI-----LEG----NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+LSNC I+ I L N +K L +F++ E L +L ++
Sbjct: 468 DLSNCNINDISFINYLHNLTYLNVDKLKYKSNILGNISFVSSLEK--------LEYLSIA 519
Query: 175 NSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLS------NTRFSS 227
N+ + L + L LD++ + I + V +G + N ++
Sbjct: 520 NTDVVNIDVLKNLINLRKLDITGCAQINTQVLNHVEIIGNEIVNFGDKVLEREIRELINN 579
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAET 285
I L ++ L LSG I D + + M +L ++D+SN +I I+++
Sbjct: 580 YSEPIYKRQLSSITKLELSGRGIVD--LQGLESMENLTYLDLSNNEISNIDSIKKLANLK 637
Query: 286 DLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 339
LVL S+ ++++L +LE L+L + D T L +L L L + VS+
Sbjct: 638 KLVLHKNKIGSIKSIESLKYLEELDLSNNLIGDIT--ALGGLSQLTRLDLSRNGI--VSI 693
Query: 340 HQLSSLSKLTNL------------------SIRDAVLTNSGLGSF 366
+ L SL L L S+R+ L NSG+ +F
Sbjct: 694 NSLGSLINLQYLSLYENKISEGEEYLKKLYSLRELYLKNSGVSNF 738
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 57/296 (19%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----------QVGAETDLVLSLTALQ 295
+G Q+ D I ++ + +L +D++N I ++GA + + +++ L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGA--NQISNISPLA 229
Query: 296 NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 230 GLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 5 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 62
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 63 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 115
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 116 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 172
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 173 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 226
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 227 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 284
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 285 LTYLTLYFNNISDIS--PVSSLTKLQRL 310
>gi|431930507|ref|YP_007243553.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
gi|431828810|gb|AGA89923.1| TIR domain-containing protein [Thioflavicoccus mobilis 8321]
Length = 1283
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 66/408 (16%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+ CL+ LD S K+++ G L ++ L+ L S T + AD + L+ L NL LD G
Sbjct: 95 LPCLRRLDCSG-AKLSNLGF--LAGLTALQYLKCSSTQV-AD-LTPLAGLTNLQALDCGC 149
Query: 61 LPVTDLV-------LRSLQV-------------LTKLEYLDLWGSQVSNRGAAVLKMFPR 100
PVTDL LRSL LT L+ LD ++V++ A L
Sbjct: 150 TPVTDLTPLAGLTNLRSLDCAYTPVAGLEPLADLTTLKSLDCRHTRVAD--LAPLAGLTE 207
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L FL+ T V L ++SL L +C +++ A LA + F +
Sbjct: 208 LQFLDCGDTRVADLEPVASLANLQSLDCGGTRVVDLTP-LAGLANLQALDCGFTQVADLA 266
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS---------------- 204
+ L LD ++ ++ L + L+ L + + D +
Sbjct: 267 PLASLTNLQSLDCRSAPVTDLGPLASLGNLQSLICQFTPVADLAPLAGLTNLLSLNCWNT 326
Query: 205 ----VEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM 260
+ +A +G NL++LN S+T A + LAG L NL L +G+ + D A ++
Sbjct: 327 PVIDLAPLASIG-NLQSLNCSST--PVADLASLAG-LTNLRSLECAGSPVTDLAP--LAG 380
Query: 261 MPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
+ +L+ +D T + ++ + V L L L +L+ L QT V+D
Sbjct: 381 LTNLRSLDCEGTPVADLGPLINLTNLRSLDCGFTRVTDLAPLAGLTNLQSLICRQTPVAD 440
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 360
L PL+ L + N +TD++ L+ L+ + +L + ++N
Sbjct: 441 --LAPLAALNNLQSFACGNTRITDLT--PLADLANMESLDCGETPISN 484
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 56/325 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQA-DRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKL 348
L +L+L +++D+S +SSL+KL
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKL 363
>gi|290996590|ref|XP_002680865.1| predicted protein [Naegleria gruberi]
gi|284094487|gb|EFC48121.1| predicted protein [Naegleria gruberi]
Length = 304
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 156 EREAFLYIET-SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
E E+ Y++ + L L+ S S L++MK+L L L+ ++ +E ++ + +
Sbjct: 95 EAESVAYLKKLTNLKELNCSPDSYGTSAHLSEMKSLNSLILNVKYNKEEDIENISKLTS- 153
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L +L L N+ +S G L+ ++ + L+LSG I D + + + +L F+++S +
Sbjct: 154 LNHLKLWNSNINSKGAEFLS-NISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSYNGL 212
Query: 275 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
+T L NL L LNL + D +S F L +L LRN +
Sbjct: 213 SDS------------GITNLGNLRKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQI 260
Query: 335 TDVSLHQLSSLSKLTNLSIRDAVL 358
T + LS+L+ L +L +R+ L
Sbjct: 261 TKNGANYLSNLNSLYSLDLRENKL 284
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
+ G + L +IS+ L LS + G+ + L NL+ L+L ++D + +L L
Sbjct: 164 INSKGAEFLSNISSFTSLNLSGNVIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNL 223
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNISSLECLNLSNCT 129
KL L+L G+ + ++GA ++ F L +L L +TK L N++SL L+L
Sbjct: 224 RKLTDLNLNGNNIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDLRENK 283
Query: 130 IDSILE 135
+D +E
Sbjct: 284 LDYKIE 289
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
++ L+LS V + DAG+ ++ ++ L L LS GL+ GI L +L+ L+ L+L G
Sbjct: 175 ISSFTSLNLSGNV-IRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNG 233
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL 106
+ D + + + L+YL L +Q++ GA L L L+L
Sbjct: 234 NNIEDQGAKIISKFSHLKYLQLRNNQITKNGANYLSNLNSLYSLDL 279
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 34/283 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LDLS VTDA +K + I ++ +L + T + I +S ++ L L LG L +
Sbjct: 35 LTALDLSYNELVTDAHVKEISLIPSMRRLNIFCTDIGKQSIVYISEMKLLESLILGELRL 94
Query: 64 TDLVLRSLQVLTKLEYL----DLWGSQVSNRGAAVLKMFPRLS--FLNLAWTGVTKLPNI 117
+ L+ LT L+ L D +G+ +A L L+ LN+ + + NI
Sbjct: 95 EAESVAYLKKLTNLKELNCSPDSYGT------SAHLSEMKSLNSLILNVKYNKEEDIENI 148
Query: 118 SSLECLN---LSNCTIDSILEGNE---NKAPLAKISLAGTTFINEREAFLYIETSL--LS 169
S L LN L N I+S +G E N + ++L+G R+A L L L+
Sbjct: 149 SKLTSLNHLKLWNSNINS--KGAEFLSNISSFTSLNLSGNVI---RDAGLVNIGKLANLT 203
Query: 170 FLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
FL++S + LS L ++ L L+L+ + I D ++++ ++L+ L L N + +
Sbjct: 204 FLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISKF-SHLKYLQLRNNQITK 262
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLK--FID 268
G L+ +L +L L L ++ DY I + P+++ FI+
Sbjct: 263 NGANYLS-NLNSLYSLDLRENKL-DYKIE--KIFPNVRRLFIE 301
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLE 241
++++MK LE L L + +SV + + NL+ LN S + ++ HL ++
Sbjct: 76 VYISEMKLLESLILGELRLEAESVAYLKKL-TNLKELNCSPDSYGTSA------HLSEMK 128
Query: 242 -----ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KG--FIQQVGAETDLVLS-- 290
IL++ + +D I +S + SL + + N++I KG F+ + + T L LS
Sbjct: 129 SLNSLILNVKYNKEED--IENISKLTSLNHLKLWNSNINSKGAEFLSNISSFTSLNLSGN 186
Query: 291 ------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
L + L +L LNL +SD+ + L ++L L+L ++ D +S
Sbjct: 187 VIRDAGLVNIGKLANLTFLNLSYNGLSDSGITNLGNLRKLTDLNLNGNNIEDQGAKIISK 246
Query: 345 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
S L L +R+ +T +G SL LDL L
Sbjct: 247 FSHLKYLQLRNNQITKNGANYLSNLNSLYSLDLRENKL 284
>gi|196046515|ref|ZP_03113740.1| putative internalin [Bacillus cereus 03BB108]
gi|196022699|gb|EDX61381.1| putative internalin [Bacillus cereus 03BB108]
Length = 759
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK--- 385
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
L+ ++ + LE L + + +++D T PLS +L L L N L D++
Sbjct: 386 -----------DLSGIEQMKQLEELWIGKNEITDVT--PLSKMTQLKELHLPNNELKDIT 432
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F +K L HL L + D + V+M +L +L+LSN +
Sbjct: 243 LKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----DHLDSLDLSNNKI 297
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 298 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 321
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 322 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 366
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 367 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 397
>gi|47566217|ref|ZP_00237245.1| Rab family protein [Bacillus cereus G9241]
gi|47556770|gb|EAL15101.1| Rab family protein [Bacillus cereus G9241]
Length = 755
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 271
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 272 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 328
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 329 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 379
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 380 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 426
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 427 IT--PLSSLVNLQKLDLE 442
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 293
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 294 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 363 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 393
>gi|423454102|ref|ZP_17430955.1| hypothetical protein IEE_02846 [Bacillus cereus BAG5X1-1]
gi|423468774|ref|ZP_17445518.1| hypothetical protein IEM_00080 [Bacillus cereus BAG6O-2]
gi|401137072|gb|EJQ44656.1| hypothetical protein IEE_02846 [Bacillus cereus BAG5X1-1]
gi|402440125|gb|EJV72118.1| hypothetical protein IEM_00080 [Bacillus cereus BAG6O-2]
Length = 510
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVG---------A 283
HL +LE +++ T ++D +S + MPSLK +DISNTDIK F + Q +
Sbjct: 304 AHLQHLEEMNIKKTSVND--LSALVEMPSLKKLDISNTDIKDFSLLPQFRKLESLSVHIS 361
Query: 284 ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLS 343
+ +++++ + L HL L LE V++ L L +LI + N S+ D + +
Sbjct: 362 NREQLIAISKINTLKHLRILGLE--NVNEVELLVLQNLNKLITIEFEN-SIVD-NFNCFK 417
Query: 344 SLSKLTNLSIRDAVLTNSG-LGSFKPPRSLKLLDLHGG 380
+ L N+ ++D + N LG K LK L+L G
Sbjct: 418 DNTALQNIKLKDTNVKNGNVLGRLK---GLKELELDGA 452
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|290996013|ref|XP_002680577.1| predicted protein [Naegleria gruberi]
gi|284094198|gb|EFC47833.1| predicted protein [Naegleria gruberi]
Length = 395
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 18/277 (6%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L LD+S + G K + + L L + L + L+ L+ LD+ G +
Sbjct: 102 LTNLDISHN-SIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLKQLTKLDISGNNI 160
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK-----LPNIS 118
D +S+ L +L LD+ + +SN G L +L +LN+++ V + + N+
Sbjct: 161 DDEGAKSIGQLKQLTKLDISVNYLSNVGVKHLSDLQQLIYLNVSYNDVDEEVAKDIYNMK 220
Query: 119 SLECLNL--SNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYI-ETSLLSFLDVS 174
L LN+ ++ I+S + G + + + G + F +I + L+ LD+S
Sbjct: 221 KLSKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLG----NDGFEFISKLKHLTMLDIS 276
Query: 175 NSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 232
+ ++ L++M+ L LD+ + IGD + ++ + L +LN N F + G
Sbjct: 277 ENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISML-KKLTDLNARNNEFGNEGAKY 335
Query: 233 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
++ + L IL + + D I ++ M +LK + I
Sbjct: 336 IS-EMMQLTILQVDENKFGDEGIIAITKMKNLKKLRI 371
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 42/306 (13%)
Query: 97 MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTF--I 154
+ P+L+ L L+ + I + L + N + + I++G E L +++ + +
Sbjct: 29 LMPKLTELKLSKHTFNDIEPIGKFKQLTILNISDNPIMKGVEAIGLLKQLTELDVRYCRM 88
Query: 155 NEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKAL---------------------- 190
E + + + L+ LD+S++S+ F F+ +MK L
Sbjct: 89 GEEGSKIISKLGQLTNLDISHNSIRSKGFKFICEMKQLIILKVQYNKLEKSSSNQIEDLK 148
Query: 191 --EHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGT 248
LD+S + I D+ + + + L L++S S+ GV L+ L L L++S
Sbjct: 149 QLTKLDISGNNIDDEGAKSIGQL-KQLTKLDISVNYLSNVGVKHLS-DLQQLIYLNVSYN 206
Query: 249 QIDDYAISYMSMMPSLKFIDISNTD--IKGF--IQQVGAETDLVLSLTALQN-------- 296
+D+ + M L ++I D I+ F I ++ L + L N
Sbjct: 207 DVDEEVAKDIYNMKKLSKLNIGGNDLNIESFSMIGKMDHLKKLEFGVVGLGNDGFEFISK 266
Query: 297 LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDA 356
L HL L++ + Q++D LS + L L + S+ D + +S L KLT+L+ R+
Sbjct: 267 LKHLTMLDISENQINDNGAELLSRMEHLTKLDVGFNSIGDRGIRSISMLKKLTDLNARNN 326
Query: 357 VLTNSG 362
N G
Sbjct: 327 EFGNEG 332
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M LK+L+ V + + G + + + L L +SE + +G LLS +++L+ LD+G
Sbjct: 243 MDHLKKLEFG-VVGLGNDGFEFISKLKHLTMLDISENQINDNGAELLSRMEHLTKLDVGF 301
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL--------AWTGVT 112
+ D +RS+ +L KL L+ ++ N GA + +L+ L + +T
Sbjct: 302 NSIGDRGIRSISMLKKLTDLNARNNEFGNEGAKYISEMMQLTILQVDENKFGDEGIIAIT 361
Query: 113 KLPNISSLECL 123
K+ N+ L
Sbjct: 362 KMKNLKKLRIF 372
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|449485666|ref|XP_004157239.1| PREDICTED: F-box/LRR-repeat protein 3-like [Cucumis sativus]
Length = 640
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 168/382 (43%), Gaps = 47/382 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLL-SISTLEKLWLSETGLTAD-GIALLSS-LQNLSVLDLGG 60
LKE+ L +C+ VTD G+ ++ LE+L L +D G+ LL NL LDL
Sbjct: 146 LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGLELLCKKCFNLRFLDLSY 205
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGS--------QVSNRGAAVLKMFPRLSFLNLAWTGVT 112
L VT+ LRS+ L KLE L + G Q G LK ++ G+T
Sbjct: 206 LKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQFLEHGCPFLKKLDISRCDGISSYGLT 265
Query: 113 K-LPNISSLECLNLSNC----TIDSILEGNENKAPLAKISLAGT----TFIN--EREAFL 161
L LE L+ S C + DSI +N L I L GT TF N
Sbjct: 266 SILRGHDGLEQLDASYCISELSTDSIYS-LKNLKCLKAIRLDGTQLSSTFFNVISVHCEY 324
Query: 162 YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSM-IGDDSVEMVACVGANLRNLNL 220
+E L L V+++++ + ++ +L+ L+L+ I D ++ A L +L L
Sbjct: 325 LVELGLSKCLGVTDANIIQ--LTSRCISLKVLNLTCCHSITDAAISKTATSCLKLMSLKL 382
Query: 221 -SNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDY---AISYMSMMPSLKFIDISNTDIK 275
S + + LA + P+LE L L+ ++D +S S + SLK +N K
Sbjct: 383 ESCNMITERSLDQLALNCPSLEELDLTDCCGVNDKGLECLSRCSQLLSLKLGLCTNITDK 442
Query: 276 GFIQQVGAETDLVLSLTALQNLNHLERLNLEQT-QVSDATLFPLST-FKELIHLSLRNAS 333
G I ++G N + L+L + + DA L LS+ K+L+ L+L +
Sbjct: 443 GLI-KIGL------------NCKRIHELDLYRCLGIGDAGLEALSSGGKKLMKLNLSYCN 489
Query: 334 -LTDVSLHQLSSLSKLTNLSIR 354
LTD + + L +L L IR
Sbjct: 490 KLTDRGMGYIGHLEELCVLEIR 511
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 278
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 279 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKL 348
+S +SSL+KL
Sbjct: 305 IS--PVSSLTKL 314
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|423576853|ref|ZP_17552972.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
gi|401206603|gb|EJR13391.1| hypothetical protein II9_04074 [Bacillus cereus MSX-D12]
Length = 766
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|229132224|ref|ZP_04261081.1| Internalin [Bacillus cereus BDRD-ST196]
gi|228651272|gb|EEL07250.1| Internalin [Bacillus cereus BDRD-ST196]
Length = 766
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 31/267 (11%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + T S N L ++L G F +
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVAN-AKITDPSFFA---NLKQLNHLALRGNEF---SD 278
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 279 VTPLVKMENLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 335
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNTD 273
NL+N + + V L+ L N+ L+L+G QI+D Y + L K D+S D
Sbjct: 336 NLANNKITD--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLKDLVLTRNKVKDLSGID 392
Query: 274 IKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 333
+ ++ + + +T L + L L+L ++ D T PLS L L L
Sbjct: 393 QMNQLNKLFIGKNQIEDVTTLAKMTQLTELDLPNNELKDIT--PLSNLVNLQKLDLEANY 450
Query: 334 LTDVSLHQLSSLSKLTNLS-----IRD 355
++D+S +S L+KL LS IRD
Sbjct: 451 ISDLS--PVSKLNKLVYLSFVANEIRD 475
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 58/194 (29%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ ++ F +K L HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKITDPSFFANLKQLNHLALRGNEFSDVTPLVKM-----ENLESLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL +++D PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITDVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLT 359
L +L ++D VLT
Sbjct: 368 KPLYSLPLKDLVLT 381
>gi|228984504|ref|ZP_04144681.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775207|gb|EEM23596.1| Internalin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 766
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDHLESLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK- 390
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 391 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKELHLPNNELKD 437
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M +L +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DHLESLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L + D VLT + + +K L+
Sbjct: 374 KPLYSLPLTDLVLTRNKVKDLSGIEQMKQLE 404
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|206967913|ref|ZP_03228869.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
gi|206736833|gb|EDZ53980.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus
AH1134]
Length = 1086
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + L+ L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LKTLTVANNQISN 347
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 278
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 279 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDINPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 52/312 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK------GFI 278
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 279 QQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
+ G + + + +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTGLKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKL 348
+S +SSL+KL
Sbjct: 291 IS--PVSSLTKL 300
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + L +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290990752|ref|XP_002678000.1| predicted protein [Naegleria gruberi]
gi|284091610|gb|EFC45256.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 11 RCVKVTDAGM---KHLLSISTLEK----LWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
R VKV A + K L++ +L K L ++E GL L+S L+ L+ LD+G V
Sbjct: 87 RNVKVNYANLIRDKQFLTVLSLMKNLTCLSINENGLKEKEAKLISKLKELTYLDIGKNSV 146
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
+ + + L+ L + + + GA + +L+ L + W + ++ E +
Sbjct: 147 GRKGAKYISKMKNLKTLQIPLNNIGPNGAISISKMKQLTSLVICWNMI----DLEGFEAI 202
Query: 124 ----NLSNCTIDSILEGNENKAPLA--------------KISLAGTTFINEREAFLYIET 165
NL I G E L+ +I+ G ++ E + + +
Sbjct: 203 ARMNNLKYLKISGYYNGPEGMRLLSSGLVNLTSLDVSRNEINPEGAKYLGEMKNLIELRA 262
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
+ + L F++Q++ L LD+ S++I + + + NL+ LN+S T+
Sbjct: 263 TF------NIVELGGIKFISQLRNLTLLDVQSNIIESEGARFIKKL-KNLKILNVSATKM 315
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
++ G + G + L L +S +S +P+L +DIS+ +I
Sbjct: 316 NATGANYI-GEMTQLTELDISYNHFGVEGARAISRLPNLVILDISSNNI 363
>gi|301126468|ref|XP_002909849.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101999|gb|EEY60051.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 427
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLSSLQN--LSVLDLGG 60
LKE++L+ C +TD ++ L ++S L + L +T I LL+ Q+ L+ ++LG
Sbjct: 88 LKEVNLTGCSSLTDESVEQLANLSGLTSVALKGCYQVTDKSIKLLTESQSNSLTSVNLGY 147
Query: 61 LPV-TDLVLRSLQV-LTKLEYLDLWG-SQVSNRGAAVLKMFPRLSFLNLAWT-------- 109
V +D + ++ L+KL YL+L G SQV + G L L LNL +
Sbjct: 148 CKVVSDEGITAIASNLSKLNYLNLRGCSQVGDNGIRALARLKNLQTLNLWYCNQGALTDG 207
Query: 110 GVTKLPNISSLECLNLSNCT 129
G++ L ++SL LNLSNC+
Sbjct: 208 GISALAEVTSLTSLNLSNCS 227
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETG-LTADGIALLSSLQNLSVLDLG 59
+T L L+LS C ++TD G+ L ++ L L ++ G +T G L+ L NL LD+
Sbjct: 215 VTSLTSLNLSNCSQLTDEGISSLSTLVKLRHLEIANVGEVTDQGFLALAPLVNLVTLDVA 274
Query: 60 G-LPVTDLVLRSLQVLTKLEYLDLW-GSQVSNRGAAVLKMFPRLSFLNLAWTG------- 110
G +TD L KL +LW S++ + ++ ++ FLN G
Sbjct: 275 GCYNITDAGTEVLVNFPKLASCNLWYCSEIGDATFQHMESLTKMRFLNFMKCGKVTDRGL 334
Query: 111 --VTKLPNISSLE---CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
+ KL N++SL+ C N+++ ++ + + N L + L G + I +
Sbjct: 335 RSIAKLRNLTSLDMVSCFNVTDEGLNELSKLNR----LKSLYLGGCSGIRDEGIAALSHL 390
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIG 201
S L LD+SN C KAL +D + + G
Sbjct: 391 SSLVILDLSN------CRQVGNKALLGIDDGTGVSG 420
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|298709905|emb|CBJ26245.1| Leucine rich repeat protein [Ectocarpus siliculosus]
Length = 262
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
L + AL+HL L+++ + E + + +L L+L N + G L NLE L
Sbjct: 65 LGNLGALQHLALNANWLSGHIPEELGAL-RHLEMLSLHNNWLEGP-IPEQLGSLTNLEKL 122
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
L ++ + + + L+ + +S + GFI + L +L+HL+ L
Sbjct: 123 LLFNNRLTGSIPTKLGALAKLEKLALSLNRLTGFIPK------------ELGDLSHLQML 170
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
+L Q+ L EL L L N LT+ QL ++KL + I LT S
Sbjct: 171 HLGDNQLDGPIPETLGALGELKELGLNNNKLTETIPKQLGDMTKLERVWISRNELTGSLP 230
Query: 364 GSFKPPRSLKLLDLH 378
PR+LKLL LH
Sbjct: 231 PELAYPRALKLLHLH 245
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|229195625|ref|ZP_04322391.1| Internalin [Bacillus cereus m1293]
gi|228587874|gb|EEK45926.1| Internalin [Bacillus cereus m1293]
Length = 772
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTTLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 392
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 393 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 437
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTTLVKM-----DNLDSLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 374 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 404
>gi|12581504|gb|AAG59625.1| GU1 [Trypanosoma brucei]
gi|261333153|emb|CBH16148.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 846
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 160/375 (42%), Gaps = 66/375 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LD R + DA + +++ LE L L D + L L+NL LDL G V
Sbjct: 488 LVKLDTER-TGIMDANVCQVVACKKLEFLSFRYCHLLTD-VKCLEGLRNLKTLDLAGTNV 545
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL--E 121
T+ + SL LEY+D+ + + L FL LPN+ + +
Sbjct: 546 TNEGISSLPKCVSLEYVDV----------SECCLITHLEFLR-------PLPNLQQVVAD 588
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD--------V 173
+NL++ + G L +++L NE + + L +L +
Sbjct: 589 QMNLTD------IGGLTGAPSLRRVTL------NESKRLGTVGEVRLPYLQELSLRKSTI 636
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVG 231
SN+ + L ++L+HLD+ SV ++ + NLR L L N R + +
Sbjct: 637 SNAGIRS--LLASCRSLQHLDMQHC----HSVTELSALSQLPNLRELLLRNIRVTGEFMT 690
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVG---- 282
+A + NL L ++ D ++ +S + SL+ ID+S T IKG +
Sbjct: 691 HIASCV-NLRKLQMTECA-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSKCYALRKL 748
Query: 283 --AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS- 338
+E V ++ L L L L+LE+T V+D + LS +L L+L S +T+V
Sbjct: 749 NLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCSRITNVER 808
Query: 339 LHQLSSLSKLTNLSI 353
LH SSL L +
Sbjct: 809 LH--SSLPHLEEFDV 821
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 183/433 (42%), Gaps = 96/433 (22%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-- 61
L+ + L C+K+ + L S+ L L +S + +G+ L L++L VL
Sbjct: 277 LQYVMLDNCMKLR--SLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNR 334
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNISSL 120
P + SL L +L+ D W V + G A +L L L+ V+ + +++L
Sbjct: 335 PTAVEFISSLGSLVELDLRDNW---VGDAGCASFVHCRQLQQLKLSCCRRVSDVRWLAAL 391
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
CL T+D L+ ++ + R +E ++ DV S
Sbjct: 392 TCLR----TLD-----------LSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVS--- 433
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVA-CVG---------ANLRNLNLSNT-----RF 225
FL++++ L+HLDLS + IG+ +++ + C G +++++L+ T +
Sbjct: 434 --FLSELRLLKHLDLSGTDIGEQNLDPIGQCEGLTFLLLKDCSSVKDLHFLETLRELVKL 491
Query: 226 SSAGVGILAGH-----------------------------LPNLEILSLSGTQIDDYAIS 256
+ GI+ + L NL+ L L+GT + + IS
Sbjct: 492 DTERTGIMDANVCQVVACKKLEFLSFRYCHLLTDVKCLEGLRNLKTLDLAGTNVTNEGIS 551
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA--- 313
+ SL+++D+S E L+ L L+ L +L+++ +Q ++D
Sbjct: 552 SLPKCVSLEYVDVS-------------ECCLITHLEFLRPLPNLQQVVADQMNLTDIGGL 598
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSL 372
T P S + ++ S R ++ +V L L LS+R + ++N+G+ S RSL
Sbjct: 599 TGAP-SLRRVTLNESKRLGTVGEV------RLPYLQELSLRKSTISNAGIRSLLASCRSL 651
Query: 373 KLLDLHGGWLLTE 385
+ LD+ +TE
Sbjct: 652 QHLDMQHCHSVTE 664
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|290970038|ref|XP_002668017.1| predicted protein [Naegleria gruberi]
gi|284081041|gb|EFC35273.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 20 MKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEY 79
+K + + L L +S + G+ +S ++ L+ LD+ +D + + + +L
Sbjct: 70 LKFISDMKRLTSLDISFNQIGVQGVKFISGMKQLTSLDISFNQASDEGAKYISEMKQLTS 129
Query: 80 LDLWGSQVSNRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSIL 134
L + + + + GA + +L+ LNL + G + + L L++S+ ID
Sbjct: 130 LGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSNLID--- 186
Query: 135 EGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD 194
+ G FI E + TSL + + +++ +++MK L L+
Sbjct: 187 -------------VEGVKFIKEMKQL----TSLNIYYNGIGVEGAKY--ISEMKQLTSLN 227
Query: 195 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 254
++++ IGD+ + ++ + L +L +S + G + + L L++SG +I D
Sbjct: 228 ITNNEIGDEGAKYISEM-KQLISLIISRNQIGDEGAKYIC-EMEQLTSLNISGNEIGDEG 285
Query: 255 ISYMSMMPSLKFIDIS 270
Y+S M L +DIS
Sbjct: 286 AKYISDMKQLTSLDIS 301
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
F++ MK L LD+S + D+ + ++ + L +L +S G ++ + L
Sbjct: 96 FISGMKQLTSLDISFNQASDEGAKYISEM-KQLTSLGISKNLIGDEGAKYIS-EMKQLTS 153
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNT--DIKG--FIQQVGAETDL--------VLS 290
L+L +I D Y+S M L +DIS+ D++G FI+++ T L V
Sbjct: 154 LNLYYNEICDEGAKYISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEG 213
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
+ + L LN+ ++ D +S K+LI L + + D + + +LT+
Sbjct: 214 AKYISEMKQLTSLNITNNEIGDEGAKYISEMKQLISLIISRNQIGDEGAKYICEMEQLTS 273
Query: 351 LSIRDAVLTNSGLGSFKPPRSLKLLDL 377
L+I + + G + L LD+
Sbjct: 274 LNISGNEIGDEGAKYISDMKQLTSLDI 300
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S + +D G K++ + L L +S+ + +G +S ++ L+ L+L
Sbjct: 100 MKQLTSLDIS-FNQASDEGAKYISEMKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYY 158
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV-----TKLP 115
+ D + + + +L LD+ + + G +K +L+ LN+ + G+ +
Sbjct: 159 NEICDEGAKYISEMEQLTSLDISSNLIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYIS 218
Query: 116 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 175
+ L LN++N I G+E G +I+E + + + ++S + +
Sbjct: 219 EMKQLTSLNITNNEI-----GDE-----------GAKYISEMKQLISL---IISRNQIGD 259
Query: 176 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVA 209
C +M+ L L++S + IGD+ + ++
Sbjct: 260 EGAKYIC---EMEQLTSLNISGNEIGDEGAKYIS 290
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 14/223 (6%)
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
S + F++ MK L LD+S + IG V+ ++ + L +L++S + S G ++
Sbjct: 66 SFEKLKFISDMKRLTSLDISFNQIGVQGVKFISGM-KQLTSLDISFNQASDEGAKYIS-E 123
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDLVLS-- 290
+ L L +S I D Y+S M L +++ +I +I ++ T L +S
Sbjct: 124 MKQLTSLGISKNLIGDEGAKYISEMKQLTSLNLYYNEICDEGAKYISEMEQLTSLDISSN 183
Query: 291 ------LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSS 344
+ ++ + L LN+ + +S K+L L++ N + D +S
Sbjct: 184 LIDVEGVKFIKEMKQLTSLNIYYNGIGVEGAKYISEMKQLTSLNITNNEIGDEGAKYISE 243
Query: 345 LSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ +L +L I + + G L L++ G + E A
Sbjct: 244 MKQLISLIISRNQIGDEGAKYICEMEQLTSLNISGNEIGDEGA 286
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDINPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L ++++L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISSLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|356536441|ref|XP_003536746.1| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
Length = 419
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 40/279 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSET-GLTADGI-ALLSSLQNLSVLD 57
TCLK L+L C +TDAGMK + +S L+ L +S LT G+ A+ +L +L
Sbjct: 109 FTCLKILNLHNCKGITDAGMKAIGEGLSLLQSLDVSYCRKLTDKGLSAVAKGCCDLRILH 168
Query: 58 LGGLP-VTDLVLRSLQVLTK-LEYLDLWG-SQVSNRGAAVLKMFPR-LSFL------NLA 107
+ G V D VL +L + LE L L G + +++ G L R + FL N++
Sbjct: 169 MAGCRFVNDGVLEALSKYCRNLEELGLQGCTSITDNGLINLASGCRQIRFLDINKCSNVS 228
Query: 108 WTGV--------TKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREA 159
GV + L + L+C + + TI SI E N L + + G ++ +A
Sbjct: 229 DVGVSSFSSACSSSLKTLKLLDCYKIGDETILSIAEFCGN---LETLIIGGCRDVSA-DA 284
Query: 160 FLYIETSLLS---------FLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVA 209
+ T+ S L+ S+SSLS C L+Q + LE LD+ + D + ++++
Sbjct: 285 IKSLATACGSSLKNLRMDWCLNTSDSSLS--CVLSQCRNLEALDIGCCEELTDAAFQLMS 342
Query: 210 CV--GANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 245
G +L+ L +SN + + AG+GI+ G +L+ L +
Sbjct: 343 NEEPGLSLKILKVSNCPKITVAGIGIIVGKCTSLQYLDV 381
>gi|149173873|ref|ZP_01852502.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
gi|148847403|gb|EDL61737.1| hypothetical protein PM8797T_05530 [Planctomyces maris DSM 8797]
Length = 473
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 185 TQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
T+++ALE + G + E + +G NL++L + T FS AG+ L+G L L
Sbjct: 203 TELRALE-------LWGPITDECLKPLGKLKNLKHLIVVGT-FSDAGLKHLSG-LKQLTR 253
Query: 243 LSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER 302
L L Q+ ++ + P L+ S + G T L L L L
Sbjct: 254 LVLHSDQMTGSGLNSFAEAPELREFGFSGSP-------AGNAT-----LKQLDQLPGLAV 301
Query: 303 LNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
LNL V+DA L + +L LSL+N+++TD L L + L L + +TN+G
Sbjct: 302 LNLSTPSVNDAVLQTMPDLPQLEALSLKNSNITDKGLDALVKVKNLRELVLYSTEITNAG 361
Query: 363 LGSFKPPRSLKLLDL 377
L +P + L+LL L
Sbjct: 362 LIRLEPLQQLRLLVL 376
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L + N L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D SV +A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|18568223|gb|AAL75966.1|AF467462_1 PpaB [Danio rerio]
Length = 392
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 69/317 (21%)
Query: 4 LKELDLSRCVKVTDAGMKHLL--SISTLEKLWLSETGLTADGI--ALLSSLQNLSVLDLG 59
++ L+LS C +TD G+ H I +L L LS D + L+NL VL+LG
Sbjct: 90 IESLNLSGCYNLTDNGLGHAFVQEIPSLRVLNLSLCKQITDSSLGRIAQYLKNLEVLELG 149
Query: 60 GLP---------------------------VTDLVLRSLQVLTK--------LEYLDLWG 84
G V+D+ + L +T+ LEYL L
Sbjct: 150 GCSNITNTGLLLIAWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLSLEYLTLQD 209
Query: 85 SQ--VSNRGAAVLKMFPRLSFLNLAW------TGVTKLPNISSLECLNLSNCTIDSILEG 136
Q + K +L LNL++ G+ L +++SL LNL +C D+I +
Sbjct: 210 CQKLTDLSLKHISKGLTKLKVLNLSFCGGISDAGMIHLSHMTSLWSLNLRSC--DNISDT 267
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD-VSNSSLSRFCFLTQMKALEHLDL 195
+ + L+G +SF D + + SL+ C + L+ L L
Sbjct: 268 GIMHLAMGTLRLSGLD---------------VSFCDKIGDQSLA--CIAQGLYQLKSLSL 310
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSN-TRFSSAGVGILAGHLPNLEILSLSG-TQIDDY 253
S I DD + + LR LN+ R + G+ ++A HL L + L G T+I
Sbjct: 311 CSCHISDDGINRMVRQMHELRTLNIGQCVRITDKGLELIADHLTQLTGIDLYGCTKITKR 370
Query: 254 AISYMSMMPSLKFIDIS 270
+ ++ +P LK ++
Sbjct: 371 GLERITQLPCLKVFNLG 387
>gi|71748370|ref|XP_823240.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832908|gb|EAN78412.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 846
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 160/375 (42%), Gaps = 66/375 (17%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +LD R + DA + +++ LE L L D + L L+NL LDL G V
Sbjct: 488 LVKLDTER-TGIMDANVCQVVACKKLEFLSFRYCHLLTD-VKCLEGLRNLKTLDLAGTNV 545
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL--E 121
T+ + SL LEY+D+ + + L FL LPN+ + +
Sbjct: 546 TNEGISSLPKCVSLEYVDV----------SECCLITHLEFLR-------PLPNLQQVVAD 588
Query: 122 CLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD--------V 173
+NL++ + G L +++L NE + + L +L +
Sbjct: 589 QMNLTD------IGGLTGAPSLRRVTL------NESKRLGTVGEVRLPYLQELSLRKSTI 636
Query: 174 SNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVG 231
SN+ + L ++L+HLD+ SV ++ + NLR L L N R + +
Sbjct: 637 SNAGIRS--LLASCRSLQHLDMQHC----HSVTELSALSQLPNLRELLLRNIRVTGEFMT 690
Query: 232 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD-----IKGFIQQVG---- 282
+A + NL L ++ D ++ +S + SL+ ID+S T IKG +
Sbjct: 691 HIASCV-NLRKLQMTECA-DITDVNCLSALQSLEDIDLSRTSVTTEGIKGLSKCYALRKL 748
Query: 283 --AETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS-LTDVS- 338
+E V ++ L L L L+LE+T V+D + LS +L L+L S +T+V
Sbjct: 749 NLSECRYVTNVNCLGKLPFLRELHLEKTNVTDKGIAGLSNCIQLETLALTKCSRITNVER 808
Query: 339 LHQLSSLSKLTNLSI 353
LH SSL L +
Sbjct: 809 LH--SSLPHLEEFDV 821
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 183/433 (42%), Gaps = 96/433 (22%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL-- 61
L+ + L C+K+ + L S+ L L +S + +G+ L L++L VL
Sbjct: 277 LQYVMLDNCMKLR--SLNCLGSLRNLRTLIVSRNRIPEEGVQGLRKLRDLEVLRFSVFNR 334
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNISSL 120
P + SL L +L+ D W V + G A +L L L+ V+ + +++L
Sbjct: 335 PTAVEFISSLGSLVELDLRDNW---VGDAGCASFVHCRQLQQLKLSCCRRVSDVRWLAAL 391
Query: 121 ECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR 180
CL T+D L+ ++ + R +E ++ DV S
Sbjct: 392 TCLR----TLD-----------LSHTNVRSRWLESLRACRYLVELNVAYCRDVVEVS--- 433
Query: 181 FCFLTQMKALEHLDLSSSMIGDDSVEMVA-CVG---------ANLRNLNLSNT-----RF 225
FL++++ L+HLDLS + IG+ +++ + C G +++++L+ T +
Sbjct: 434 --FLSELRLLKHLDLSGTDIGEQNLDPIGRCEGLTFLLLKDCSSVKDLHFLETLRELVKL 491
Query: 226 SSAGVGILAGH-----------------------------LPNLEILSLSGTQIDDYAIS 256
+ GI+ + L NL+ L L+GT + + IS
Sbjct: 492 DTERTGIMDANVCQVVACKKLEFLSFRYCHLLTDVKCLEGLRNLKTLDLAGTNVTNEGIS 551
Query: 257 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA--- 313
+ SL+++D+S E L+ L L+ L +L+++ +Q ++D
Sbjct: 552 SLPKCVSLEYVDVS-------------ECCLITHLEFLRPLPNLQQVVADQMNLTDIGGL 598
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGS-FKPPRSL 372
T P S + ++ S R ++ +V L L LS+R + ++N+G+ S RSL
Sbjct: 599 TGAP-SLRRVTLNESKRLGTVGEV------RLPYLQELSLRKSTISNAGIRSLLASCRSL 651
Query: 373 KLLDLHGGWLLTE 385
+ LD+ +TE
Sbjct: 652 QHLDMQHCHSVTE 664
>gi|402553188|ref|YP_006594459.1| internalin [Bacillus cereus FRI-35]
gi|401794398|gb|AFQ08257.1| internalin [Bacillus cereus FRI-35]
Length = 760
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLKQ------LKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPIVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 386
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 387 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPIVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|365163588|ref|ZP_09359694.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
gi|363615357|gb|EHL66823.1| hypothetical protein HMPREF1014_05157, partial [Bacillus sp.
7_6_55CFAA_CT2]
Length = 869
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
+ FL + N+ +S L+QMK ++ LDL+S+ I D ++ + V + L+ L ++N + S+
Sbjct: 291 IEFLTLRNNKISDLSPLSQMKKIKMLDLNSNYIKD--IKPLFTVKS-LKTLTVANNQISN 347
Query: 228 AGVGILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
LAG L N++ LSLS + + I +++ M L +D++ +++
Sbjct: 348 DN---LAGIEQLKNVKNLSLSNNGLTN--IEHITSMKKLVELDLAKNELE---------- 392
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L L+ ++ LNLE+ +SD T PLS +L L L + + DV
Sbjct: 393 ----NIEPLSRLSTVQSLNLEENYISDIT--PLSHLTDLYDLKLGSNEIRDV 438
>gi|339233720|ref|XP_003381977.1| putative leucine Rich repeat-containing domain protein [Trichinella
spiralis]
gi|316979164|gb|EFV61992.1| putative leucine Rich repeat-containing domain protein [Trichinella
spiralis]
Length = 958
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 23 LLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSL-QVLTKLEYLD 81
L ++ LEK+ +S L + L V+ ++ L SL +V LE LD
Sbjct: 134 LKALKNLEKIDISNNALVDLTEYAFEHNEALKVIRAKNNKISTLSPNSLNEVKNILELLD 193
Query: 82 LWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA 141
L G+Q+ A L+ F +L L+L+ + K+PN L+ +N+ D L GN+ A
Sbjct: 194 LSGNQLIQVPAQNLRSFQKLRVLDLSDNLIDKIPN---LQFMNMPELR-DLRLGGNKIAA 249
Query: 142 --PLAKISLAGTTFIN-EREAFLYIETSL------LSFLDVSNSSLSR-----FCFLTQM 187
PLA +++ +N R A +ET+ L LD+S + L++ F L ++
Sbjct: 250 VMPLAFMNIPKLEVLNLTRNAITTMETNPIQQFENLEILDLSWNKLNKLNASSFKDLAKL 309
Query: 188 KALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 247
K L HL + I + M + LR +NL+N + LPNL L L+
Sbjct: 310 KEL-HLQNNEIQIVE---TMAVSDNSELRMINLANNKIKELYKNAF-DQLPNLNTLILTN 364
Query: 248 TQIDDYAISYMSMMPSLKFIDISNTDI----KGFIQQVGAETDL--------VLSLTALQ 295
Q+ + +S MP+L+ + + + I KG + + T L +L +
Sbjct: 365 NQLHEIDQGMLSGMPNLQQLKLRSNKILKIEKGAFETMPLLTMLDVSDNLLEILPVEVFH 424
Query: 296 NLNHLERLNLEQTQVSD 312
NLN L L+L ++ +
Sbjct: 425 NLNRLFWLDLSNNRIRN 441
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D SV +A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|357448529|ref|XP_003594540.1| hypothetical protein MTR_2g030380 [Medicago truncatula]
gi|355483588|gb|AES64791.1| hypothetical protein MTR_2g030380 [Medicago truncatula]
Length = 1048
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 51/375 (13%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSE---TGLTADGIALLSSLQNLSVLD 57
M +K LDLSR ++ A L +++L L LS TG G L+SSL L D
Sbjct: 149 MASIKSLDLSRNA-LSGALPSSLPKLNSLVSLNLSYNRLTGKIPKGFELISSLDKL---D 204
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQV--SNRGAAVLKMFPRLSFLNLAWTGVTKL- 114
L G + +L+ Y+DL + + S+ G + + + +LNL+ +T +
Sbjct: 205 LHGNMFDGPLDVEFMLLSSASYVDLSDNMLLSSSSGKFLPGISESIKYLNLSHNQLTGIL 264
Query: 115 ------PNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE-REAFLYIETSL 167
P L+ L+LS ++ L G + L + L+ F L ++ +
Sbjct: 265 VGGAEQPVFQDLKVLDLSYNQLNGELPGFDFVYDLQILKLSNNRFSGFIPNGLLKGDSLV 324
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRN--------- 217
L+ LD+S ++LS + L L+LSS+ G+ + +C +L N
Sbjct: 325 LTELDLSANNLSGPLSMITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKFEGNLTR 384
Query: 218 -LNLSNTRFSSAGVGILAGHLPN-------LEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
L N + G LAG++P L L+LS ++ D ++ P L+ +DI
Sbjct: 385 MLKWGNIEYLDLGRNRLAGNVPEVTPQFLRLNYLNLSNNRLSDDLPKVLTQYPKLRVLDI 444
Query: 270 SNTDIKGF----------IQQVGAETDLV---LSLTALQNLNHLERLNLEQTQVSDATLF 316
S+ +KG +Q++ E +L+ ++L++ + +HL+ L+L Q+S + F
Sbjct: 445 SSNQLKGVLLTELFTMPTLQELHLENNLINGGINLSSSLDQSHLQVLDLSHNQLS--SFF 502
Query: 317 PLSTFKELIHLSLRN 331
P F L L + N
Sbjct: 503 P-DEFGSLTSLRVLN 516
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|195378110|ref|XP_002047830.1| GJ11710 [Drosophila virilis]
gi|194154988|gb|EDW70172.1| GJ11710 [Drosophila virilis]
Length = 536
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 159/390 (40%), Gaps = 60/390 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+L+ C ++ + KH ++L L +S L AL+ L NL + +
Sbjct: 101 LQRLNLTHC-QLEELRSKHFADNASLLNLDVSHNDLLIIERALMRQLPNLVYANFSNNLI 159
Query: 64 TDLVLRSLQVLTKLEYLDL---------WGSQVSNRGAAV------------LKMFPRLS 102
++ + + L LE+LDL GS + R ++ L+ P+L
Sbjct: 160 ANVEFDAFKDLKYLEFLDLNTNEQENITLGSNANLRYLSISNNNVRDFLWCRLRGLPKLQ 219
Query: 103 FLNLA--WTGVTKLPNISSLECLNLSNCTIDSILEGNEN--------KAPLAKISLAGTT 152
L+L W V + +L L + N + ++I E N PL ++ +
Sbjct: 220 ELHLHSNWLEVLDMGIFYALPELRVLNVSNNNIYEIQRNLFVGPAPDVYPLLRVLDYSSN 279
Query: 153 FINEREAFLY-----IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEM 207
+ E +++ +ET L F +S S + F LT++++L+ + G+ V++
Sbjct: 280 NVKALEDYVFSRLHHLETLNLWFNQISKVSPTAFRGLTELQSLQ-------LQGNKIVQL 332
Query: 208 VACVGAN---LRNLNLSNTRFSSAGVGILAGH-LPNLEILSLSGTQIDDYAISYMSMMPS 263
V N L+ L+LS G + G L NL L LS ID S +P
Sbjct: 333 PDEVFGNLTALQVLDLSKNNIRQLGANVFGGSVLRNLSFLDLSNNNIDQLHPLAFSSLPF 392
Query: 264 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
L+ + + + L + L L L L + ++ D LSTF +
Sbjct: 393 LQELRLRRNKLTS------------LDIRMFAPLRRLRVLTLSENRLMDIEADLLSTFDK 440
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
L L + N LT + + + LS+L ++SI
Sbjct: 441 LTELQINNNQLTYLPVLEEQLLSQLRHISI 470
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 23/254 (9%)
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACV 211
NE+E + L +L +SN+++ F C L + L+ L L S+ + + ++M +
Sbjct: 181 NEQENITLGSNANLRYLSISNNNVRDFLWCRLRGLPKLQELHLHSNWL--EVLDMGIFYA 238
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPN----LEILSLSGTQI---DDYAISYMSMMPSL 264
LR LN+SN + G P+ L +L S + +DY S + + +L
Sbjct: 239 LPELRVLNVSNNNIYEIQRNLFVGPAPDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETL 298
Query: 265 -----KFIDISNTDIKGFIQ----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSD--A 313
+ +S T +G + Q+ + L NL L+ L+L + + A
Sbjct: 299 NLWFNQISKVSPTAFRGLTELQSLQLQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGA 358
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
+F S + L L L N ++ + SSL L L +R LT+ + F P R L+
Sbjct: 359 NVFGGSVLRNLSFLDLSNNNIDQLHPLAFSSLPFLQELRLRRNKLTSLDIRMFAPLRRLR 418
Query: 374 LLDLHGGWLLTEDA 387
+L L L+ +A
Sbjct: 419 VLTLSENRLMDIEA 432
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 30/291 (10%)
Query: 110 GVTKLPNISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLL 168
G N +SL+ LNL++C ++ + + + A L + ++ + A + + L
Sbjct: 91 GRYGFRNFASLQRLNLTHCQLEELRSKHFADNASLLNLDVSHNDLLIIERALMR-QLPNL 149
Query: 169 SFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFS 226
+ + SN+ ++ F +K LE LDL++ ++ + ANLR L++SN
Sbjct: 150 VYANFSNNLIANVEFDAFKDLKYLEFLDLNT----NEQENITLGSNANLRYLSISNNNVR 205
Query: 227 SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ---VGA 283
L G LP L+ L L ++ + +P L+ +++SN +I IQ+ VG
Sbjct: 206 DFLWCRLRG-LPKLQELHLHSNWLEVLDMGIFYALPELRVLNVSNNNIYE-IQRNLFVGP 263
Query: 284 ETDLVLSLTALQ---------------NLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 328
D+ L L L+HLE LNL Q+S + EL L
Sbjct: 264 APDVYPLLRVLDYSSNNVKALEDYVFSRLHHLETLNLWFNQISKVSPTAFRGLTELQSLQ 323
Query: 329 LRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPP--RSLKLLDL 377
L+ + + +L+ L L + + G F R+L LDL
Sbjct: 324 LQGNKIVQLPDEVFGNLTALQVLDLSKNNIRQLGANVFGGSVLRNLSFLDL 374
>gi|300704108|ref|YP_003745710.1| leucine-rich-repeat type III effector protein (gala4) [Ralstonia
solanacearum CFBP2957]
gi|299071771|emb|CBJ43095.1| leucine-rich-repeat type III effector protein (GALA4) [Ralstonia
solanacearum CFBP2957]
Length = 461
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 56/287 (19%)
Query: 4 LKELDLSRCV-KVTDAGMKHLLSISTLEKLWLSETGLTAD-------------------- 42
L+ELDLS C +T G+ HLL++ L++L +S L AD
Sbjct: 145 LRELDLSLCEGPITAVGIAHLLALP-LDRLDVSGCELNADSARLLAGHPTLTTLNLRRNA 203
Query: 43 ----GIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMF 98
G+A + + L+ L++ + +R+L T + LD+ +++ + GA L
Sbjct: 204 IDDAGVAAFARNKKLTTLNVSSNGIGPAGVRALAANTTITTLDISNNEIGDEGALALASN 263
Query: 99 PRLSFLN-----LAWTGVTKLPNISSLECLNLS--------------NCTIDSILE-GNE 138
L+ L+ + G L ++L L+LS N T+ ++ GNE
Sbjct: 264 TTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYNAIEAEGVEALGRNTTLRTLHACGNE 323
Query: 139 NKAPLAKISLAGTTF---------INEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKA 189
A++ A TT I A + + L L++SN+ + R
Sbjct: 324 LGHREAELLAANTTLTVLNLSSNAIGNAGARAFGANTTLVELNLSNNGIERVPEWADNGK 383
Query: 190 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
L LDLS++ IGD + +++A L LN+ + R G LAG+
Sbjct: 384 LTTLDLSNNQIGDTAAQVLAA-SRTLTTLNVGSNRIGDTGACALAGN 429
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 35/242 (14%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGL 61
T + LD+S ++ D G L S +TL +L S+ G+ +G L++ L+ LDL
Sbjct: 240 TTITTLDISNN-EIGDEGALALASNTTLTRLDASDCGIGPEGTQALATSTTLTSLDLSYN 298
Query: 62 PVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAW-----TGVTKLPN 116
+ + +L T L L G+++ +R A +L L+ LNL+ G
Sbjct: 299 AIEAEGVEALGRNTTLRTLHACGNELGHREAELLAANTTLTVLNLSSNAIGNAGARAFGA 358
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
++L LNLSN I+ + E + + L+ LD+SN+
Sbjct: 359 NTTLVELNLSNNGIERVPE--------------------------WADNGKLTTLDLSNN 392
Query: 177 SLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA 234
+ L + L L++ S+ IGD +A L LN+S R AG+ LA
Sbjct: 393 QIGDTAAQVLAASRTLTTLNVGSNRIGDTGACALAG-NTTLTTLNVSLNRIGKAGMLALA 451
Query: 235 GH 236
+
Sbjct: 452 AN 453
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 56/328 (17%)
Query: 58 LGGLPVTDLVLRS-LQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPN 116
LG VTD V ++ L +T L+ D G + S G L +++F N T +T L N
Sbjct: 61 LGKTNVTDTVSQTDLDQVTTLQ-ADRLGIK-SIDGVEYLNNLTQINFSNNQLTDITPLKN 118
Query: 117 ISSLECLNLSNCTIDSILEGNENKAPLAKIS-LAGTTFINEREAFL----------YIET 165
++ L + ++N I I PLA ++ L G T N + + +E
Sbjct: 119 LTKLVDILMNNNQIADI-------TPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 171
Query: 166 SLLSFLDVSN----SSLSRFCF---------LTQMKALEHLDLSSSMIGDDSVEMVACVG 212
S + D+S +SL + F L + LE LD+SS+ + D + ++A +
Sbjct: 172 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL- 228
Query: 213 ANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN 271
NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N
Sbjct: 229 TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 282
Query: 272 TDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 323
I G T+L L +++ L L L L L + Q+ D + P+S K
Sbjct: 283 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKN 340
Query: 324 LIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L +L+L +++D+S +SSL+KL L
Sbjct: 341 LTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|196040684|ref|ZP_03107983.1| internalin [Bacillus cereus NVH0597-99]
gi|196028474|gb|EDX67082.1| internalin [Bacillus cereus NVH0597-99]
Length = 644
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 38/256 (14%)
Query: 103 FLN----LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINERE 158
FLN L ++ + +PN+ SL N + S N L ++L G F +
Sbjct: 225 FLNTNEILDYSALKYMPNLKSLTVAN-AKIKDPSFFA---NLKQLNHLALRGNEF---SD 277
Query: 159 AFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L L
Sbjct: 278 VTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDYL 334
Query: 219 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
NL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 335 NLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLTDLVLTRNK--- 383
Query: 279 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 338
V L+ ++ + LE L + + ++ D T PLS +L L L N L D++
Sbjct: 384 ---------VKDLSGIEQMKQLEELWIGKNEIKDIT--PLSKMTQLKELHLPNNELKDIT 432
Query: 339 LHQLSSLSKLTNLSIR 354
LSSL L L +
Sbjct: 433 --PLSSLVNLQKLDLE 446
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|229016676|ref|ZP_04173611.1| Internalin [Bacillus cereus AH1273]
gi|228744612|gb|EEL94679.1| Internalin [Bacillus cereus AH1273]
Length = 490
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 26/182 (14%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
L LD+SN+ ++ L MK ++ L LS + I D V +A + L LNL+N + ++
Sbjct: 18 LESLDLSNNKITNVAPLIGMKNVKSLYLSGNQIED--VTALAKM-EQLDYLNLANNKITN 74
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 75 --VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK------------ 116
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLS 346
L+ + +N L +L + + Q+ D T PL+ +L L L N L D++ L L +L
Sbjct: 117 --DLSGIDQMNQLNKLFIGKNQIEDVT--PLAKMTQLTELDLPNNELKDITPLSNLVNLQ 172
Query: 347 KL 348
KL
Sbjct: 173 KL 174
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 57/327 (17%)
Query: 37 TGLTADGIAL-----LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
T L AD + + L L NL+ ++ +TD+ L+ LTKL + + +Q+++
Sbjct: 12 TTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADIT 69
Query: 92 A-AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 150
A L L+ N T + L N+++L L LS+ TI I +L+G
Sbjct: 70 PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSG 117
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
T + + LSF + ++ L + LE LD+SS+ + D SV +A
Sbjct: 118 LTNLQQ-----------LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAK 160
Query: 211 VGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D+
Sbjct: 161 L-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDL 213
Query: 270 SNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+N I G T+L L +++ L L L L L + Q+ D + P+S
Sbjct: 214 ANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNL 271
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKL 348
K L +L+L +++D+S +SSL+KL
Sbjct: 272 KNLTYLTLYFNNISDIS--PVSSLTKL 296
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNKVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|260830796|ref|XP_002610346.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
gi|229295711|gb|EEN66356.1| hypothetical protein BRAFLDRAFT_136091 [Branchiostoma floridae]
Length = 305
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 24/236 (10%)
Query: 170 FLDVSNSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
+LD++ +S S +F L+Q L+ + L + + D + + NL +L L+ R
Sbjct: 2 YLDLTGNSFSTVEGSQFSGLSQ---LQEIRLDRNGVTDLDRDAFRSL-ENLYSLRLAGNR 57
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT-----DIKGFIQ 279
++ L +LP L+ L L I + S +PSL +D+S+ D F
Sbjct: 58 LTTVPQQALQ-YLPVLKHLHLQQNSIRSVSEDDFSGLPSLTQLDLSDNLIAEVDTSAFTP 116
Query: 280 QVGAETDLVLSLTALQNLNH--------LERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
E L LSL L L H L RL L+ T ++D T L F L L L +
Sbjct: 117 LSNLEV-LNLSLNPLSQLRHGPDQGLPWLRRLYLQHTAITDVTAEMLKGFSNLTDLELGS 175
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDA 387
+ V+ S L L +R+ +TN G+F P L+ L L L+ D+
Sbjct: 176 CRIQSVAADAFSPTRGLAYLGLRNNSITNIAAGTFAPLSKLETLYLDDNGLVGLDS 231
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLTGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|195574935|ref|XP_002105438.1| GD21488 [Drosophila simulans]
gi|194201365|gb|EDX14941.1| GD21488 [Drosophila simulans]
Length = 962
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 175/411 (42%), Gaps = 49/411 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ +DLSRC + L + L+ ++L++ L +L N+S +DL +
Sbjct: 548 LQVIDLSRC-NIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNLWNISSIDLSNNRI 606
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVS-------NRGAAV-----------------LKMFP 99
+ + + KL+ LDL G+Q+S N G + ++ P
Sbjct: 607 GSIRSGAFVNVMKLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIHP 666
Query: 100 RLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
RL + A + P + LE ++LS+ + +I E + + P ++ L +
Sbjct: 667 RLREIRAANNKFSFFPAELISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQL 726
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVG 212
+ + ++ L LD++N++L R T + LE L+L + + + S +
Sbjct: 727 DMVSEMAFHNSTQLQILDLANNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFERTK 786
Query: 213 AN-LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID--- 268
L N+NL++ RF A + L + + LS +I + S+M ++K ID
Sbjct: 787 LQMLENINLAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELP-GDDSIMVNIKRIDLSF 845
Query: 269 --ISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER-----LNLEQTQVSDAT--LFPLS 319
+S+ + + + +L L+ T ++NL LE LNL ++ + +F
Sbjct: 846 NPLSSKAVHNVLNEPKTVRELSLAGTGIENLELLETPFLQFLNLSHNKLKNVKPEVFQRV 905
Query: 320 TFKELIHLSLRN-ASLTDVSLH--QLSSLSKLTNLSIRDAVLTNSGLGSFK 367
T E + LS SL D+S+ QL L L + +++ S GS++
Sbjct: 906 TLLETLDLSSNQLESLEDLSMAWPQLQVLQSLDVSNNSFEIVSQSNFGSWR 956
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 40/400 (10%)
Query: 3 CLKELDLSRCVKVTDAGMKHLLS-----ISTLEKLWLSETGLTADGIALLSSLQNLSVLD 57
K L R +K+ + HL S + +L+KL LSE L+++ L L+
Sbjct: 251 AFKGLQKIREIKLAGNRISHLNSDVFEKLQSLQKLDLSENFFGQFPTVALAAVPGLKHLN 310
Query: 58 LGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT----- 112
L + L +QV+ LE LD+ + +++ + L +L+L+ +
Sbjct: 311 LSSNMLQQLDYTHMQVVRSLESLDISRNTITSITPGTFREMGALKYLDLSLNSLRTIEDD 370
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET-SLLSFL 171
L + SL+ L + + I + + P L R A L E L
Sbjct: 371 ALEGLDSLQTLIIKDNNILLVPGSALGRLP----QLTSLQLDYNRVAALSAEILGSLQAG 426
Query: 172 DVSNSSLSRFCF-------LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 224
D++ SLSR +L LDLS + + + + A + + L L LS R
Sbjct: 427 DITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNR 486
Query: 225 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
+ G+G LP L L LSG + + +PS F ++ N +Q +
Sbjct: 487 LT--GLGGAPWVLPELRSLDLSGNTLTE--------LPSTIFEELEN------LQSLNLS 530
Query: 285 TDLVLSLTA--LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
+ + LT + L+ L+ ++L + + + L+ ++L H+ L + L ++
Sbjct: 531 GNHLTPLTGALFKPLDRLQVIDLSRCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSF 590
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL 382
+L ++++ + + + + G+F L+ LDLHG L
Sbjct: 591 VNLWNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHGNQL 630
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 60/324 (18%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
STL L LS+ LT G A L L LDL G +T+L + L L+ L+L G+
Sbjct: 475 STLMALKLSQNRLTGLGGAPWV-LPELRSLDLSGNTLTELPSTIFEELENLQSLNLSGNH 533
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----------------------------NI 117
++ A+ K RL ++L+ + ++ N+
Sbjct: 534 LTPLTGALFKPLDRLQVIDLSRCNIRQISGDLLAGLQDLKHIYLNDNQLQELQDGSFVNL 593
Query: 118 SSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFL--YIETSL-LSFLDV 173
++ ++LSN I SI G N L K+ L G N+ AF Y T + LD+
Sbjct: 594 WNISSIDLSNNRIGSIRSGAFVNVMKLQKLDLHG----NQLSAFKGEYFNTGTGIEELDI 649
Query: 174 SNSSLSRFCFLTQMK---ALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
S++ LS + F + + L + +++ E+++ + L +++LS+ + +
Sbjct: 650 SDNQLS-YLFPSSFRIHPRLREIRAANNKFSFFPAELISTLQY-LEHIDLSHNQLKTIEE 707
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPS--LKFIDISNTDIKGFIQQVGAETDLV 288
A LP L +L ++ Q+D +S M+ S L+ +D++N ++ ++G T
Sbjct: 708 LDFA-RLPRLRVLLVANNQLD--MVSEMAFHNSTQLQILDLANNNLD----RIGERT--- 757
Query: 289 LSLTALQNLNHLERLNLEQTQVSD 312
+ L LE+LNLE ++S+
Sbjct: 758 -----FEGLVRLEQLNLEGNRLSE 776
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L+ L+LS F LA +P L+ L+LS + ++M ++ SL+ +DIS I
Sbjct: 282 LQKLDLSENFFGQFPTVALAA-VPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTI 340
Query: 275 ----KGFIQQVGAETDLVLSLTALQNL--NHLERLNLEQTQV---SDATLFP---LSTFK 322
G +++GA L LSL +L+ + + LE L+ QT + ++ L P L
Sbjct: 341 TSITPGTFREMGALKYLDLSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLP 400
Query: 323 ELIHLSLRNASLTDVSLHQLSSLSK--LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGG 380
+L L L + +S L SL +T LS+ V+ GSF+ SL LDL G
Sbjct: 401 QLTSLQLDYNRVAALSAEILGSLQAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGN 460
Query: 381 WLLTEDA 387
L +A
Sbjct: 461 SLAVINA 467
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKIS-LA 149
G L +++F N T +T L N++ L + ++N I I PLA ++ L
Sbjct: 8 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADI-------TPLANLTNLT 60
Query: 150 GTTFINEREAFL----------YIETSLLSFLDVSN----SSLSRFCF---------LTQ 186
G T N + + +E S + D+S +SL + F L
Sbjct: 61 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLAN 120
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSL 245
+ LE LD+SS+ + D + ++A + NL +L +N + S +GIL NL+ LSL
Sbjct: 121 LTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQISDITPLGILT----NLDELSL 173
Query: 246 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDLVL------SLTALQNL 297
+G Q+ D I ++ + +L +D++N I G T+L L +++ L L
Sbjct: 174 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGL 231
Query: 298 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
L L L + Q+ D + P+S K L +L+L +++D+S +SSL+KL L
Sbjct: 232 TALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRL 281
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 24 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 81
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 82 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 120
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 121 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 171
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 172 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 225
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 226 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 283
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 284 IS--PVSSLTKLQRL 296
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPIAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-RGAAVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|356563009|ref|XP_003549759.1| PREDICTED: EIN3-binding F-box protein 1-like [Glycine max]
Length = 639
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 167/362 (46%), Gaps = 41/362 (11%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIST-LEKLWLSETGLTAD-GIA-LLSSLQNLSVLDLGG 60
L L + C + + G++ + + T L+ + L + L D G++ LL+S NLS + L
Sbjct: 240 LTTLTIESCPNIGNEGLQAIARLCTKLQSISLKDCPLVGDHGVSSLLASASNLSRVKLQT 299
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-AWTGVTKLPNISS 119
L +TD SL V+ +G ++N + LK F + A G+ KL +++
Sbjct: 300 LKITDF---SLAVICH------YGKAITNLVLSGLKNVTERGFWVMGAAQGLQKLVSLTV 350
Query: 120 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 179
C +++ +I++I +G N L ++ L F+++ + + +S + +
Sbjct: 351 TSCRGITDTSIEAIGKGCIN---LKQLCLHRCCFVSD-SGLVAFAKAAVSLESLQLEECN 406
Query: 180 RF------CFLTQMKA-LEHLDLSSSMIGDDSVEMVACV---GANLRNLNLSNT-RFSSA 228
RF L +K L+ L L M G ++M C+ +LR+L + F SA
Sbjct: 407 RFTQSGIIVALANIKTKLKSLSLVKCM-GVKDIDMEVCMLSPCESLRSLVIQKCPGFGSA 465
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFID--ISNTDIKGFIQQVGAETD 286
+ ++ P L+ L+L+G Y I+ ++P L+ + + N ++ G TD
Sbjct: 466 SLAMIGKLCPRLQHLNLTGL----YGITDAGLLPLLENCEAGLVNVNLTGCWNL----TD 517
Query: 287 LVLSLTALQNLNHLERLNLEQT-QVSDATLFPLS-TFKELIHLSLRNASLTDVSLHQLSS 344
V+S A + LE LNL+ +++DA+L ++ F L L + +++D + LS
Sbjct: 518 KVVSALARLHGGTLEVLNLDGCWKITDASLVAIANNFLVLNDLDVSKCAISDAGIALLSR 577
Query: 345 LS 346
S
Sbjct: 578 AS 579
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 50/257 (19%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSIS-TLEKLWLSETG-LTADGIALL-----SSLQNLSVL 56
LK+L L RC V+D+G+ + +LE L L E T GI + + L++LS++
Sbjct: 371 LKQLCLHRCCFVSDSGLVAFAKAAVSLESLQLEECNRFTQSGIIVALANIKTKLKSLSLV 430
Query: 57 DLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVL----KMFPRLSFLNLAWTGVT 112
G+ D+ + L L L + + G+A L K+ PRL LNL TG+
Sbjct: 431 KCMGVKDIDMEVCMLSPCESLRSLVI--QKCPGFGSASLAMIGKLCPRLQHLNL--TGLY 486
Query: 113 KLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLD 172
+ + L L NC +A L ++L G + ++
Sbjct: 487 GITDAGLLPLLE--NC-----------EAGLVNVNLTGCWNLTDKVV------------- 520
Query: 173 VSNSSLSRFCFLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
S+L+R LE L+L I D S+ +A L +L++S S AG+
Sbjct: 521 ---SALARL----HGGTLEVLNLDGCWKITDASLVAIANNFLVLNDLDVSKCAISDAGIA 573
Query: 232 ILA-GHLPNLEILSLSG 247
+L+ LP+L++LSLSG
Sbjct: 574 LLSRASLPSLQVLSLSG 590
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|283778456|ref|YP_003369211.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
gi|283436909|gb|ADB15351.1| hypothetical protein Psta_0665 [Pirellula staleyi DSM 6068]
Length = 397
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 14 KVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQV 73
++ D +K + I +++ L + + +T +G+ + +NL+ L++ +TD L+SL
Sbjct: 169 EIEDDHLKAVAGIPSVQHLQVIRSSITDEGLQHFAERENLATLEIYVAAITDAGLKSLVN 228
Query: 74 LTKLEYLDLWGSQVSNRGAAVLKMFP-----RLSFLNLAWTGVTKLPNISSLECLNLSNC 128
L KL L+L G+ V+++ + F RL +++ G+T L LE L +S C
Sbjct: 229 LPKLRKLELLGTSVTDQSMPTIGRFRSLRQLRLDAHSISDEGLTFLSRNEKLEVLLVSGC 288
Query: 129 TIDSILEGNENKAPLAKISL--AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQ 186
ID G L + L A +T IN+ L+ L++ S ++
Sbjct: 289 PIDGT--GFAKLCELQNLRLVDASSTNINDEGLAAIASLPGLTLLEIRQSKVT------- 339
Query: 187 MKALEHLDLSSSM 199
K L+HL+ S +
Sbjct: 340 GKGLQHLERSEQL 352
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 43/261 (16%)
Query: 16 TDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLT 75
TD + L+ + L + +S+T ++ G+A L+S + L + L G + D L+++ +
Sbjct: 123 TDKCIDELIKVHQLRGVSISKTSISPAGLARLASCRELVSISLWGPEIEDDHLKAVAGIP 182
Query: 76 KLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILE 135
+++L + S +++ G L+ F + N+++LE D+ L+
Sbjct: 183 SVQHLQVIRSSITDEG---LQHF-------------AERENLATLEIY--VAAITDAGLK 224
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDL 195
N L K+ L GT S D S ++ RF ++L L L
Sbjct: 225 SLVNLPKLRKLELLGT-----------------SVTDQSMPTIGRF------RSLRQLRL 261
Query: 196 SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI 255
+ I D+ + ++ L L +S G L L NL ++ S T I+D +
Sbjct: 262 DAHSISDEGLTFLS-RNEKLEVLLVSGCPIDGTGFAKLC-ELQNLRLVDASSTNINDEGL 319
Query: 256 SYMSMMPSLKFIDISNTDIKG 276
+ ++ +P L ++I + + G
Sbjct: 320 AAIASLPGLTLLEIRQSKVTG 340
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 16/169 (9%)
Query: 212 GANLRNLNLSNTRFSSAGVGILAGH-LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 270
GAN+ + R +S+G I H L + +SL G D I + + L+ + IS
Sbjct: 86 GANVLTVT---ARGTSSGDDIEGVHQLHGIRDISLHGRAFTDKCIDELIKVHQLRGVSIS 142
Query: 271 NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 330
T I L L + L ++L ++ D L ++ + HL +
Sbjct: 143 KTSIS------------PAGLARLASCRELVSISLWGPEIEDDHLKAVAGIPSVQHLQVI 190
Query: 331 NASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
+S+TD L + L L I A +T++GL S L+ L+L G
Sbjct: 191 RSSITDEGLQHFAERENLATLEIYVAAITDAGLKSLVNLPKLRKLELLG 239
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|104646987|gb|ABF74117.1| disease resistance protein [Arabidopsis thaliana]
Length = 588
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 48/363 (13%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
LK++DL RC + + + L + LE+L LS + + +L+ LS L
Sbjct: 49 LKKMDLFRCKYLVE--VPDLSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-- 104
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSF----LNLAWTGVTKLPN-IS 118
+ L+ + + L+ L+ G G + LK FP +S+ L L+ T + +LP+ I
Sbjct: 105 --IQLKDIPIGITLKSLETVGMS----GCSSLKHFPEISWNTRRLYLSSTKIEELPSSIR 158
Query: 119 SLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
L CL ++S+C T+ S L + L ++L G + L TSL + L
Sbjct: 159 RLSCLVKLDMSDCQRLRTLPSYLG---HLVSLKSLNLDGCRRLENLPDTLQNLTSLET-L 214
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS-NTRFSSAGV 230
+VS L+ F ++E L +S + I + + C + LR+L++S N R +S V
Sbjct: 215 EVS-GCLNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQLRSLDISENKRLASLPV 271
Query: 231 GILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFIQQVG------- 282
I L +LE L LSG + + + + M L++ D+ T IK + +G
Sbjct: 272 SI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVALEV 329
Query: 283 ---AETDLVLSLTALQNLNHLERLNLEQTQVSDATLF-----PLSTFKELIHLSLRNASL 334
+ T + + ++ L L+ L + + + L PLS F +L LSL N ++
Sbjct: 330 LQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLSNMNM 389
Query: 335 TDV 337
T++
Sbjct: 390 TEI 392
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 9 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 66
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 67 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 105
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 106 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 156
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 157 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 211 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 268
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 269 IS--PVSSLTKLQRL 281
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 56/317 (17%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 37 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 94
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 95 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 133
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 134 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 184
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----- 279
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 185 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 238
Query: 280 -----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++GA + + +++ L L L L L + Q+ D + P+S K L +L+L ++
Sbjct: 239 KLTELKLGA--NQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNI 294
Query: 335 TDVSLHQLSSLSKLTNL 351
+D+S +SSL+KL L
Sbjct: 295 SDIS--PVSSLTKLQRL 309
>gi|407859465|gb|EKG07051.1| hypothetical protein TCSYLVIO_001824 [Trypanosoma cruzi]
Length = 929
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 227
LS S+ S +RF + AL LDLS + + ++ + L L+L R
Sbjct: 346 LSLCMSSSVSCTRFLRHRSLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE 405
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDL 287
+ + A L L +L+L + + D +++ + P L +D+ Q G T L
Sbjct: 406 SLQWLRA--LNQLRVLNLGYSSVTDDSLTALRFCPELAKLDL---------QWCGRITSL 454
Query: 288 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 347
+ AL + L LNL +T V+D L PL F L +SL L+ L +L++
Sbjct: 455 KYLVGAL--CDSLRELNLTETSVTDEGLVPLKDFAALELISLEGCGAVS-DLNVLCNLTR 511
Query: 348 LTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
L + + +TN G+ S ++L+++ + + LT+ L
Sbjct: 512 LREMDVGRTRVTNRGVVSLSQCQALRVMRMRQCYRLTDANFL 553
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 158/368 (42%), Gaps = 55/368 (14%)
Query: 25 SISTLEKLWLSETGLTADGIAL-LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLW 83
S+ L L LS T +T +G+ +S L LS L L G + L+ L+ L +L L+L
Sbjct: 364 SLCALRDLDLSYTQVTEEGMYRDVSKLNKLSRLSLEGCRKIE-SLQWLRALNQLRVLNLG 422
Query: 84 GSQVSNRGAAVLKMFPRLSFLNLAWTG-VTKLPNI-----SSLECLNLSNCTI-DSILEG 136
S V++ L+ P L+ L+L W G +T L + SL LNL+ ++ D L
Sbjct: 423 YSSVTDDSLTALRFCPELAKLDLQWCGRITSLKYLVGALCDSLRELNLTETSVTDEGLVP 482
Query: 137 NENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS----------------- 179
++ A L ISL G +++ + + L +DV + ++
Sbjct: 483 LKDFAALELISLEGCGAVSDLNVLCNL--TRLREMDVGRTRVTNRGVVSLSQCQALRVMR 540
Query: 180 -RFC-------FLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFSSAGV 230
R C FL ++ LE +DLS + ++ + GA +LR L L + + + V
Sbjct: 541 MRQCYRLTDANFLGALQQLEEVDLSDCPVTNEGI--AGLFGARSLRKLRLQSC-HAVSDV 597
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
L G L +L +L L T +D+ ++ P L + + + + Q
Sbjct: 598 NFLGG-LEHLMLLDLHHTTVDEEGSVGLAQCPQLMTLIMHSVLVHSLQQ----------- 645
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR---NASLTDVSLHQLSSLSK 347
A L L+RL+L T+V+ L L L LSLR N + D + Q SS +
Sbjct: 646 WNAALFLPRLKRLDLSTTKVTSDALSFLRMCPVLETLSLRGCKNITHLDFLILQPSSGAG 705
Query: 348 LTNLSIRD 355
+ + RD
Sbjct: 706 VCAIVPRD 713
>gi|290976637|ref|XP_002671046.1| predicted protein [Naegleria gruberi]
gi|284084611|gb|EFC38302.1| predicted protein [Naegleria gruberi]
Length = 350
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 153/331 (46%), Gaps = 45/331 (13%)
Query: 13 VKVTDAGMKHLLSISTLEKLWL---SETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLR 69
+ D G K + +S LEKL + S+ +T GI + ++ L+ L++ + D ++
Sbjct: 33 IGYNDIGYKAVEYLSKLEKLTILNISKCKITNLGIESMIGMKQLTSLEISENGIDDSGVK 92
Query: 70 SLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK--LPNISSLECL-NLS 126
SL L++L LD+ +++ G + L+ L++ G+ + + I L+ L NLS
Sbjct: 93 SLIELSQLTKLDIDHNEIRTEGCKCISQMKNLTDLSVGLNGIDEEGIKFICELKQLTNLS 152
Query: 127 NCTIDSI-LEGNENKAPLAK-ISL-AGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 183
I + ++G ++ L + ISL G +I + A +
Sbjct: 153 AHAIQIVSVDGVQSITSLKQLISLNIGDNWIGDAGAKV---------------------- 190
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+++MK L+ L + S++IG D + ++ + NL L++S G +++G L L L
Sbjct: 191 ISEMKQLKTLYMHSTLIGIDGTKSISEM-TNLTFLDISANNLGDEGAKLISG-LNQLIKL 248
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+S I + +S + L +D+ I ET+ SL+ L+ HL RL
Sbjct: 249 WISEISIGNEGAESISKLEKLTELDVHRNSI---------ETEGAKSLSKLK---HLTRL 296
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++ + + D+ + LS K+L HL++ + +
Sbjct: 297 DISENFIEDSGVKYLSKMKKLKHLNVYDNGI 327
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT L LD+S + D G K + ++ L KLW+SE + +G +S L+ L+ LD+
Sbjct: 218 MTNLTFLDIS-ANNLGDEGAKLISGLNQLIKLWISEISIGNEGAESISKLEKLTELDVHR 276
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGV 111
+ +SL L L LD+ + + + G L +L LN+ G+
Sbjct: 277 NSIETEGAKSLSKLKHLTRLDISENFIEDSGVKYLSKMKKLKHLNVYDNGI 327
>gi|195430008|ref|XP_002063049.1| GK21713 [Drosophila willistoni]
gi|194159134|gb|EDW74035.1| GK21713 [Drosophila willistoni]
Length = 833
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 156 EREAFLYIETSLLSFLDVSNSSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-A 213
+ AFL I+ L + N+ LS + L+ + ALE LDL+++ I ++ VG
Sbjct: 203 HKSAFLGIKGPLQALGLPGNALLSVPWNALSSLSALERLDLANNKI--KALGTADFVGLG 260
Query: 214 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISN 271
NL L LSN + SS + +L L +L L G ++ DYA S S+ +L+ +D++
Sbjct: 261 NLIYLELSNNQISSISQRTFS-NLRQLSVLKLGGNRLGDYAQSLKSLSQCLNLRELDLTA 319
Query: 272 TDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
++ G LS L L LE LNL + + L+ F L+ LSLR+
Sbjct: 320 NNLNG-----------PLSEQTLPGLRILETLNLNRNMIKSIQNKALANFSRLVSLSLRH 368
Query: 332 ASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWL--LTEDAI 388
+ + H L L +L + + S + L +LDL +L LT D I
Sbjct: 369 NQIDVLQDHAFYGLGSLDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLI 427
>gi|22347570|gb|AAM95930.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821297|gb|ACL37776.1| internalin A [Listeria monocytogenes]
gi|219821303|gb|ACL37780.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|72385483|ref|XP_846409.1| leucine-rich repeat protein (LRRP) [Trypanosoma brucei TREU927]
gi|9366582|emb|CAB95344.1| leucine-rich repeat protein (LRRP), putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 1449
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 175/418 (41%), Gaps = 54/418 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L+ L+LS C+++TD + L S + +E+L L+ GI ++ +L L VL + + +
Sbjct: 376 LERLNLSYCIQLTD--INPLSSATAIEELNLNGCRRITRGIGVVWALPKLRVLHMKDVQL 433
Query: 64 TDLVLRSL-----------------------QVLTKLEYLDLWGSQVSNRGAAVLKMFPR 100
D V+ SL + LE L++ G L P
Sbjct: 434 EDSVIGSLGNGNSFVRLSLENCAGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTLPY 493
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-----LEGNENKAPLAKISLAGTTFIN 155
L LN+ ++ L +L T++SI +E N L K+SL G T I+
Sbjct: 494 LRVLNVKEVHISSLDFTGIGASKSLLQLTLESITGLIDVEALANILTLEKLSLHGCTGID 553
Query: 156 EREAFL----YIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACV 211
L ++ LS + N SL C M +L +L M +V ++ +
Sbjct: 554 AGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSL-NLSHCWKMT---NVSHISSL 609
Query: 212 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL------- 264
A L LNL+N +AG + L L + LS T I D IS+ S +L
Sbjct: 610 EA-LNELNLNNCFGINAGWEAIE-KLQQLHVAILSNTHITDRDISHFSKCKNLVTLDLSF 667
Query: 265 --KFIDISNTDIKGFIQQVGAET--DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
K +D++ ++++ ++ ++ L+ L L L LN++ ++ D+ + L
Sbjct: 668 CNKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVELEDSVIGSLGN 727
Query: 321 FKELIHLSLRNA-SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+ LSL + DV+ LS+L L L++ SG+G+ L++LDL
Sbjct: 728 GNSFVRLSLEHCKGFGDVT--PLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDL 783
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 194/439 (44%), Gaps = 74/439 (16%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L +L +S C +TDA + ++ LE+L ++ GI L L L +LDL G+PV
Sbjct: 305 LSKLSVSECNNITDA--TPISQLAALEELNVNSCYHITKGIGTLGMLLRLRMLDLSGVPV 362
Query: 64 TDLVLR------SLQVL-----------------TKLEYLDLWGSQVSNRGAAVLKMFPR 100
D L+ SL+ L T +E L+L G + RG V+ P+
Sbjct: 363 EDNCLKDLCDCGSLERLNLSYCIQLTDINPLSSATAIEELNLNGCRRITRGIGVVWALPK 422
Query: 101 LSFLN-----LAWTGVTKLPNISSLECLNLSNC----------TIDSILEGNENKAP--L 143
L L+ L + + L N +S L+L NC +I ++ E N K +
Sbjct: 423 LRVLHMKDVQLEDSVIGSLGNGNSFVRLSLENCAGFGDMTLLSSIVTLEELNIQKCADII 482
Query: 144 AKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD 203
+ + GT Y+ +L+ +V SSL F + K+L L L S+ G
Sbjct: 483 SGVGCLGT--------LPYLR--VLNVKEVHISSLD-FTGIGASKSLLQLTL-ESITGLI 530
Query: 204 SVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPS 263
VE +A + L L+L AG+G L G+LP L++L LSGT D+ ++ + + +
Sbjct: 531 DVEALANI-LTLEKLSLHGCTGIDAGIGCL-GNLPQLKMLDLSGTNTDNESLRSLCLSQT 588
Query: 264 LKFIDISN----TDIKGFIQQVGAETDLVLS--------LTALQNLNHLERLNLEQTQVS 311
+ +++S+ T++ I + A +L L+ A++ L L L T ++
Sbjct: 589 MVSLNLSHCWKMTNV-SHISSLEALNELNLNNCFGINAGWEAIEKLQQLHVAILSNTHIT 647
Query: 312 DATLFPLSTFKELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPR 370
D + S K L+ L L + L DV+ LS+++ L L++ GL
Sbjct: 648 DRDISHFSKCKNLVTLDLSFCNKLLDVT--TLSNITTLEELNLDSCSNIRKGLSVLGELP 705
Query: 371 SLKLLDLHGGWLLTEDAIL 389
L +L++ G L ED+++
Sbjct: 706 RLCVLNIKGVEL--EDSVI 722
>gi|229138115|ref|ZP_04266713.1| Internalin [Bacillus cereus BDRD-ST26]
gi|228645460|gb|EEL01694.1| Internalin [Bacillus cereus BDRD-ST26]
Length = 772
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 232 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 282
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 283 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 339
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D I + +P LK + ++ +K
Sbjct: 340 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIED--IKPLYSLP-LKDLVLTRNKVK- 392
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 393 -------------DLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 437
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 438 IT--PLSSLVNLQKLDLE 453
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 250 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 304
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 305 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 328
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 329 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 373
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 374 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 404
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|124002318|ref|ZP_01687171.1| leucine-rich protein [Microscilla marina ATCC 23134]
gi|123992147|gb|EAY31515.1| leucine-rich protein [Microscilla marina ATCC 23134]
Length = 1282
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 26/281 (9%)
Query: 1 MTCLKELDLSRCVKVTD-AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLG 59
+T L++L+L R KV+ + HL +++ L+ LSET +T I L+ L+ L L L
Sbjct: 458 LTGLQKLEL-RATKVSKIENLNHLPALTELD---LSETAITK--IEGLTGLEGLKELSLS 511
Query: 60 GLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNIS- 118
+T + +L L+KLE L L S +S L P+L L L + L N+
Sbjct: 512 KNKITKI--ENLAGLSKLEKLSLCASNLSK--IENLTGLPKLRELCLEKNAIECLENLRG 567
Query: 119 --SLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNS 176
+L+ L+L+N I I + N LA+++L+ I + L+ LD+S +
Sbjct: 568 LPALKELDLNNNQITHI-QPNALPTQLAELNLSQNQLIKVEH---LAGVTGLTELDLSEN 623
Query: 177 SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 236
++S+ + ALE LDLS + I +E + + NLR +N+ + + +
Sbjct: 624 NISKIENFEDLPALETLDLSYNKI--TRLENLTAL-PNLREVNIYQNQITEIATDAVTRQ 680
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF 277
L L+ L QI I + L +D+ N IK F
Sbjct: 681 LQELD---LEQNQIS--TIEILVNFTGLSQVDVGNNQIKWF 716
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 185/422 (43%), Gaps = 69/422 (16%)
Query: 20 MKHLLSISTLEKLWLSETGLTA-------------------------------------- 41
+++L +++ LEKLW++ TG+
Sbjct: 298 LENLDTLTELEKLWMNHTGIKKIENLDKLTKLTHLSLMCSKVTKIENLEALTQLTSLSLH 357
Query: 42 ----DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWG---SQVSNRGAAV 94
I L +L NL+ L + G V + +L LT+L+ L L G S++ N G +
Sbjct: 358 ATKISKIENLEALTNLTKLRVDGNKVAK--IENLDNLTQLDDLMLGGNPISKIENLGHLI 415
Query: 95 LKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFI 154
+L LA T + L + +LE L+L I++I E E L K+ L T +
Sbjct: 416 --KLRKLDLGGLAITKIENLEGLRTLEQLDLGGSQIETI-ENLEGLTGLQKLELRATK-V 471
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGAN 214
++ E ++ L+ LD+S +++++ LT ++ L+ L LS + I +E +A + +
Sbjct: 472 SKIENLNHLPA--LTELDLSETAITKIEGLTGLEGLKELSLSKNKI--TKIENLAGL-SK 526
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
L L+L + S + L G LP L L L I+ + + +P+LK +D++N I
Sbjct: 527 LEKLSLCASNLSK--IENLTG-LPKLRELCLEKNAIE--CLENLRGLPALKELDLNNNQI 581
Query: 275 KGFIQQVGAETDLV---LSLTALQNLNHLERL-NLEQTQVSDATLFPLSTFKELIHLSLR 330
IQ T L LS L + HL + L + +S+ + + F++L L
Sbjct: 582 T-HIQPNALPTQLAELNLSQNQLIKVEHLAGVTGLTELDLSENNISKIENFEDLPALETL 640
Query: 331 NASLTDVS-LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAIL 389
+ S ++ L L++L L ++I +T + + R L+ LDL + T + ++
Sbjct: 641 DLSYNKITRLENLTALPNLREVNIYQNQITE--IATDAVTRQLQELDLEQNQISTIEILV 698
Query: 390 QF 391
F
Sbjct: 699 NF 700
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 57/327 (17%)
Query: 37 TGLTADGIAL-----LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
T L AD + + L L NL+ ++ +TD+ L+ LTKL + + +Q+++
Sbjct: 16 TTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADIT 73
Query: 92 A-AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 150
A L L+ N T + L N+++L L LS+ TI I +L+G
Sbjct: 74 PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSG 121
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
T + + LSF + ++ L + LE LD+SS+ + D SV +A
Sbjct: 122 LTNLQQ-----------LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAK 164
Query: 211 VGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D+
Sbjct: 165 L-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDL 217
Query: 270 SNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+N I G T+L L +++ L L L L L + Q+ D + P+S
Sbjct: 218 ANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNL 275
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKL 348
K L +L+L +++D+S +SSL+KL
Sbjct: 276 KNLTYLTLYFNNISDIS--PVSSLTKL 300
>gi|290975580|ref|XP_002670520.1| predicted protein [Naegleria gruberi]
gi|284084080|gb|EFC37776.1| predicted protein [Naegleria gruberi]
Length = 265
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
MK L LD+SS+ IGD ++ + NL L + G ++ L L IL +S
Sbjct: 1 MKQLTALDISSNRIGDGGAMLIGGL-KNLITLQIYENHLGPNGAKSIS-ELKQLTILDIS 58
Query: 247 GTQIDDYAISYMS-MMPSLKFIDISNTDI--KGFIQQVGAETDLVLSLTALQ-------- 295
+I D + +S M L +DIS I KG + V + +L+ Q
Sbjct: 59 HNRIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLVEMKNLKILAFYDCQLSTKQAET 118
Query: 296 --NLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 353
+ + L++ ++ L + K+LI L L +T + +S L +LT L+I
Sbjct: 119 ISKMKQITELDISYNLTNNEILKSIGEMKQLIKLYLVKNGITSHQVEIISQLKQLTVLNI 178
Query: 354 RDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKM 394
+ + N G+ + L LD+ + E +L CKM
Sbjct: 179 SENEIRNEGVVYISGLKQLTELDISNNGIGYE-GVLSICKM 218
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
++++K L LD+S + I D+ V+ ++ L NL++S S G+ L + NL+IL
Sbjct: 46 ISELKQLTILDISHNRIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLV-EMKNLKIL 104
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDIS----NTDIKGFIQQVGAETDLVL--------SL 291
+ Q+ +S M + +DIS N +I I ++ L L +
Sbjct: 105 AFYDCQLSTKQAETISKMKQITELDISYNLTNNEILKSIGEMKQLIKLYLVKNGITSHQV 164
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ L L LN+ + ++ + + +S K+L L + N + + + +++LT L
Sbjct: 165 EIISQLKQLTVLNISENEIRNEGVVYISGLKQLTELDISNNGIGYEGVLSICKMTQLTKL 224
Query: 352 SIRDAVLTNSGLGSFKPPRSLKLLD 376
SI + + P +L++LD
Sbjct: 225 SIYNNPI---------PEEALRILD 240
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 18/247 (7%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
M L LD+S ++ D G + + L L + E L +G +S L+ L++LD+
Sbjct: 1 MKQLTALDISSN-RIGDGGAMLIGGLKNLITLQIYENHLGPNGAKSISELKQLTILDISH 59
Query: 61 LPVTDLVLRSL-QVLTKLEYLDLWGSQVSNRGAAVL---KMFPRLSFLNLAWT-----GV 111
+ D ++S+ + + +L LD+ +S +G L K L+F + + +
Sbjct: 60 NRIRDEGVKSISEKMDQLTNLDISFVGISEKGLVPLVEMKNLKILAFYDCQLSTKQAETI 119
Query: 112 TKLPNISSLEC-LNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 170
+K+ I+ L+ NL+N + IL+ L K+ L I + + + L+
Sbjct: 120 SKMKQITELDISYNLTN---NEILKSIGEMKQLIKLYLV-KNGITSHQVEIISQLKQLTV 175
Query: 171 LDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
L++S + + +++ +K L LD+S++ IG + V + C L L++ N
Sbjct: 176 LNISENEIRNEGVVYISGLKQLTELDISNNGIGYEGV-LSICKMTQLTKLSIYNNPIPEE 234
Query: 229 GVGILAG 235
+ IL G
Sbjct: 235 ALRILDG 241
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 57/327 (17%)
Query: 37 TGLTADGIAL-----LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSN-R 90
T L AD + + L L NL+ ++ +TD+ L+ LTKL + + +Q+++
Sbjct: 30 TTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADIT 87
Query: 91 GAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 150
A L L+ N T + L N+++L L LS+ TI I +L+G
Sbjct: 88 PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSG 135
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
T + + LSF + ++ L + LE LD+SS+ + D SV +A
Sbjct: 136 LTNLQQ-----------LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAK 178
Query: 211 VGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D+
Sbjct: 179 L-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDL 231
Query: 270 SNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+N I G T+L L +++ L L L L L + Q+ D + P+S
Sbjct: 232 ANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNL 289
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKL 348
K L +L+L +++D+S +SSL+KL
Sbjct: 290 KNLTYLTLYFNNISDIS--PVSSLTKL 314
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|386771470|ref|NP_001246845.1| Toll-9, isoform B [Drosophila melanogaster]
gi|383292027|gb|AFH04516.1| Toll-9, isoform B [Drosophila melanogaster]
Length = 826
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 45/304 (14%)
Query: 90 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 148
RG ++ P ++AW K+P + L+ +SNC+I+ + E N + L ++ +
Sbjct: 163 RGNNFAELIPDAEAQSIAWATFPKMPRLVELD---ISNCSIEYVSKEAFRNVSNLRRLFM 219
Query: 149 AGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE---------------- 191
+ + + F Y++ + +LD+S ++ + + Q+ LE
Sbjct: 220 SDNKIMTISHDTFYYVQG--VQYLDLSFTNFLTYSYQLQLPTLEMALSLIYGLKIQQNVF 277
Query: 192 -------HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+LDLS S + +S A +G L+ L+L T I + LE L
Sbjct: 278 KYLPELIYLDLSHSKMTRNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKNTV--LEGLD 335
Query: 245 LSGTQIDDYAI---SYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTA 293
LSG Y I ++ + +LK++ ++IK +Q +G + + +LT
Sbjct: 336 LSGNPYLSYNIIDDAFDGIANTLKYLYFERSNIKDLEWSKSLKNLQVLGLAGNNINALTP 395
Query: 294 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
Q+L LE L+L V + L L+LR+ ++ +S L +L L
Sbjct: 396 AMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRVLNLRSNTINMLSNEMLKDFERLDYL 455
Query: 352 SIRD 355
S+ D
Sbjct: 456 SLGD 459
>gi|343421641|emb|CCD18751.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 518
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 161/381 (42%), Gaps = 47/381 (12%)
Query: 4 LKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPV 63
L L+L+ C ++TD ++ L SI TLE++ LS + G+A L SL L L+L V
Sbjct: 158 LTHLNLTECSRLTD--VEPLASIKTLEQVNLSGSFPGVRGLAALGSLPRLRELNLKHTAV 215
Query: 64 TDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECL 123
TD L++L L L L + T VT L ISSL+ +
Sbjct: 216 TDDCLKTLSASKTLVRLFLVDCR--------------------RLTDVTPLVKISSLQVV 255
Query: 124 NLSNCT-IDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC 182
+LS+C+ I + G + L +SL GT +E+ L SL S L+
Sbjct: 256 DLSDCSGITKGMGGFGTLSGLYALSLTGTALTDEQLQELCASQSLESLSIKRCKLLTDVG 315
Query: 183 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILA--GHLPNL 240
L + L LD+S D V C + LR L F+ L P L
Sbjct: 316 VLGFVTTLRELDMSEC----DGVARGFCSFSALRELRSLYMTFTCVTNECLCEISKCPQL 371
Query: 241 EILSLSGT-QIDDYAISYMSMMPSLKFIDISNT----DIKGFIQQVGAETDLVLSLTALQ 295
LS++G ++ D IS +S + +L+ ++++ D G + + L +S TA+
Sbjct: 372 VKLSVAGCKKLTD--ISCLSQVHTLEDLNVNMCEHIEDGLGVLGGLEELRTLRMSFTAVG 429
Query: 296 N--------LNHLERLNLEQTQ-VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLS 346
N LER LE + ++D + L+ + L+ L+L + +L L
Sbjct: 430 NDELRLVCKSKTLERSELEGCERITDVS--ALAVAQSLMFLNLDRCQKVVTGVGELGKLP 487
Query: 347 KLTNLSIRDAVLTNSGLGSFK 367
L +S++ +T + S K
Sbjct: 488 ALRVVSLQGVSVTEDDMKSLK 508
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 235 GHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN----TDIKGF-----IQQVGAET 285
G +P L +L+L + D + ++ SL ++++ TD++ ++QV
Sbjct: 129 GRMPCLRVLTLHRVGVTDDFLCSLTTSGSLTHLNLTECSRLTDVEPLASIKTLEQVNLSG 188
Query: 286 DL--VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA-SLTDVSLHQL 342
V L AL +L L LNL+ T V+D L LS K L+ L L + LTDV+ L
Sbjct: 189 SFPGVRGLAALGSLPRLRELNLKHTAVTDDCLKTLSASKTLVRLFLVDCRRLTDVT--PL 246
Query: 343 SSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFC 392
+S L + + D G+G F L L L G LT++ + + C
Sbjct: 247 VKISSLQVVDLSDCSGITKGMGGFGTLSGLYALSLTGTA-LTDEQLQELC 295
>gi|290988772|ref|XP_002677066.1| predicted protein [Naegleria gruberi]
gi|284090672|gb|EFC44322.1| predicted protein [Naegleria gruberi]
Length = 289
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+++++ L +L++ ++ I D+ +E ++ + NL +L +S+ R +S ++ L NL +L
Sbjct: 102 ISELRNLTYLNIGNNPINDEGIESISQLD-NLTDLTVSSLRITSKSAKFIS-KLNNLTLL 159
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
+++ I D ++S + SLK +DIS + G I +GA+ ++ L+ L L
Sbjct: 160 NIAYNNIGDEGAKFISEIKSLKILDIS---LNG-ISPIGAK--------SISELDQLTVL 207
Query: 304 NLEQT-QVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 362
+ Q + D +S K+L L +++ + + +S + KLT+L I + + G
Sbjct: 208 YISQNFSIGDEGARMISEMKQLNELYIQDCFIGNAGAISISRMDKLTHLDISENEIQIEG 267
Query: 363 LGSFKPPRSLKLLDLHG 379
+ + L L + G
Sbjct: 268 ESVIRDMKHLSYLSIEG 284
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLSDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959500|gb|ABI27277.1| internalin A [Listeria monocytogenes]
gi|112959502|gb|ABI27278.1| internalin A [Listeria monocytogenes]
gi|112959510|gb|ABI27282.1| internalin A [Listeria monocytogenes]
gi|112959512|gb|ABI27283.1| internalin A [Listeria monocytogenes]
gi|112959524|gb|ABI27289.1| internalin A [Listeria monocytogenes]
gi|112959530|gb|ABI27292.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|320165520|gb|EFW42419.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 694
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 176/417 (42%), Gaps = 35/417 (8%)
Query: 28 TLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQV 87
T L LS +T+ + ++L L+ LDL +TD+ + L L L L G+ +
Sbjct: 68 TTTSLSLSINQITSIPASAFANLTALTELDLTVNQITDISANAFAGLAALTMLFLPGNNI 127
Query: 88 SNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSI-LEGNENKA 141
+ A V L LNL+ + +P +++L+ LNL + I SI G + A
Sbjct: 128 TGIPANVFAGLTALLVLNLSGNQLASIPADAFTGLTALQTLNLQSNQITSISAAGFADLA 187
Query: 142 PLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSM 199
L + L+G + A + S L F+D+SN+ ++ T + AL L LS++
Sbjct: 188 ALKSLGLSGNR-LGSNLANAFTNQSALGFIDLSNNQITSLLADAFTGLAALNTLFLSNNN 246
Query: 200 IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQ---IDDYAIS 256
I V + A L+ L++S +F+S AG L L LSLS Q I +A +
Sbjct: 247 ITSIPANAVTGLTA-LKYLDVSGNQFTSFPASSFAG-LTALTYLSLSNNQATSISAWAFT 304
Query: 257 YMSMMPSL-----KFIDISNTDIKGF--IQQVGAETDLVLSL--TALQNLNHLERLNLEQ 307
++ + SL +F DIS G + ++G + + S+ +AL +L L L+L
Sbjct: 305 GLTALTSLQLSNNQFTDISANAFAGLPALMELGLAGNQLTSIPTSALLDLTLLNFLSLSA 364
Query: 308 TQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
Q++ + L L L LT + S L+ L LS+ T G F+
Sbjct: 365 NQITSIPASAFTGLTALFSLILSRNQLTSIPAAAFSGLTLLNILSLDTNPFTTLPPGLFQ 424
Query: 368 PPRSLKLLDLHGGWLLTEDAILQFCKMHPRIEVWHELSVICPSDQIGSNGPSPSRTS 424
G D L + + P + E +V PS ++ P P TS
Sbjct: 425 ------------GLPNDIDLSLYYESLSPNNFSFGENTVAPPSTYGSADEPYPCDTS 469
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|356518354|ref|XP_003527844.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
protein kinase At2g25790-like [Glycine max]
Length = 984
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 31/364 (8%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
MT L+ L L+ ++ D + + + +L+ ++L L+ + + + L +L+ LDL
Sbjct: 206 MTTLEYLTLASN-QLVDKIPEEIGVMKSLKWIYLGYNNLSDEIPSSIGELLSLNHLDLVY 264
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVT-----KLP 115
+T + SL LT+L+YL L+ +++S + +L L+L+ ++ ++
Sbjct: 265 NNLTGPIPHSLGHLTELQYLFLYQNKLSGPIPGSIFELKKLISLDLSDNSLSGEISERVV 324
Query: 116 NISSLECLNL-SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVS 174
+ LE L+L SN +I +G + L + L E L ++L + LD+S
Sbjct: 325 QLQRLEILHLFSNKFTGNIPKGVASLPRLQVLQLWSNGLTGEIPEELGRHSNL-TVLDLS 383
Query: 175 NSSLS-----RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAG 229
++LS C+ + L + S+S G+ + +C +LR + L N FS
Sbjct: 384 TNNLSGKIPDSICYSGSLFKL--ILFSNSFEGEIPKSLTSC--RSLRRVRLQNNTFSGKL 439
Query: 230 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
L+ LP + L +SG Q+ MPSL+ + ++N + G I L
Sbjct: 440 PSELST-LPEIYFLDISGNQLSGRIDDRKWHMPSLQMLSLANNNFSGEIPNTFGTQKL-- 496
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 349
E L+L Q S + + EL+ L LRN L ++ S KL
Sbjct: 497 -----------EDLDLSHNQFSGSIPLGFKSLSELVELKLRNNKLFGDIPEEICSCKKLV 545
Query: 350 NLSI 353
+L +
Sbjct: 546 SLDL 549
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959446|gb|ABI27250.1| internalin A [Listeria monocytogenes]
gi|112959466|gb|ABI27260.1| internalin A [Listeria monocytogenes]
gi|112959470|gb|ABI27262.1| internalin A [Listeria monocytogenes]
gi|112959474|gb|ABI27264.1| internalin A [Listeria monocytogenes]
gi|112959476|gb|ABI27265.1| internalin A [Listeria monocytogenes]
gi|112959478|gb|ABI27266.1| internalin A [Listeria monocytogenes]
gi|112959484|gb|ABI27269.1| internalin A [Listeria monocytogenes]
gi|112959486|gb|ABI27270.1| internalin A [Listeria monocytogenes]
gi|112959492|gb|ABI27273.1| internalin A [Listeria monocytogenes]
gi|112959494|gb|ABI27274.1| internalin A [Listeria monocytogenes]
gi|112959504|gb|ABI27279.1| internalin A [Listeria monocytogenes]
gi|112959516|gb|ABI27285.1| internalin A [Listeria monocytogenes]
gi|112959532|gb|ABI27293.1| internalin A [Listeria monocytogenes]
gi|112959534|gb|ABI27294.1| internalin A [Listeria monocytogenes]
gi|112959540|gb|ABI27297.1| internalin A [Listeria monocytogenes]
gi|112959544|gb|ABI27299.1| internalin A [Listeria monocytogenes]
gi|112959550|gb|ABI27302.1| internalin A [Listeria monocytogenes]
gi|112959554|gb|ABI27304.1| internalin A [Listeria monocytogenes]
gi|112959558|gb|ABI27306.1| internalin A [Listeria monocytogenes]
gi|112959560|gb|ABI27307.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|423371410|ref|ZP_17348750.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
gi|401103236|gb|EJQ11221.1| hypothetical protein IC5_00466 [Bacillus cereus AND1407]
Length = 766
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|206977546|ref|ZP_03238440.1| putative internalin [Bacillus cereus H3081.97]
gi|206744264|gb|EDZ55677.1| putative internalin [Bacillus cereus H3081.97]
Length = 766
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMPQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|85679218|gb|ABC72025.1| InlA [Listeria monocytogenes]
gi|85679232|gb|ABC72032.1| InlA [Listeria monocytogenes]
Length = 794
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|112959506|gb|ABI27280.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|222095062|ref|YP_002529122.1| internalin [Bacillus cereus Q1]
gi|375283399|ref|YP_005103837.1| internalin [Bacillus cereus NC7401]
gi|221239120|gb|ACM11830.1| internalin [Bacillus cereus Q1]
gi|358351925|dbj|BAL17097.1| internalin [Bacillus cereus NC7401]
Length = 761
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 221 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 271
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 272 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 328
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 329 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 379
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 380 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 426
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 427 IT--PLSSLVNLQKLDLE 442
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 239 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 293
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 294 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 317
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 318 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 362
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 363 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 393
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 45 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 102
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 103 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 141
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 142 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 192
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 193 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 246
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 247 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 304
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 305 IS--PVSSLTKLQRL 317
>gi|405968131|gb|EKC33230.1| Slit-like protein 1 protein [Crassostrea gigas]
Length = 874
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 19/330 (5%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L+ L L L++ A S L+ + VL L + + V SL L L+ L L G+ ++
Sbjct: 179 LQVLGLGRNPLSSVPKATFSVLRKVMVLTLDNAGLDNAVWFSLPNLHTLKDLQLQGNVIT 238
Query: 89 NRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKAPL 143
+L L L+L G+T+LP N++ L L+L+ + I G
Sbjct: 239 KLNKTILSNLRYLQNLDLGNNGLTELPSDIFHNLNELRFLHLNQNKLQEIKNGTFMGLVN 298
Query: 144 A-KISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGD 202
A + L+G I E E ++ + + LD+S ++L+R L + ++ L+L S+ I
Sbjct: 299 ALNLDLSGNE-IKEIEKTVFYDLESVLKLDISENNLTRIPNLRMSRTVQWLNLCSNHIQK 357
Query: 203 DSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMP 262
S + +L +LN+S R G + H+P L+ L LS I I +
Sbjct: 358 LSSGSFEGL-KHLEHLNISKNRLIDIKNGSFS-HIPRLKTLDLSFNNIQYIQIDAFDGLQ 415
Query: 263 ----------SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSD 312
L+ I + +K + + L + L + ++E +++ ++ +
Sbjct: 416 LLSELILHNNVLETISVEFLPLKNLLSIDLSYNKLSMKLKSGIFPKNIESIDISDNKIDE 475
Query: 313 ATLFPLSTFKELIHLSLRNASLTDVSLHQL 342
+ F + ++ L LSL+N LT + ++ L
Sbjct: 476 VSQFAIKNYQTLRKLSLQNNKLTTIKMNDL 505
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 156/330 (47%), Gaps = 57/330 (17%)
Query: 37 TGLTADGIAL-----LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG 91
T L AD + + L L NL+ ++ +TD+ L+ LTKL + + +Q+++
Sbjct: 79 TTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADIT 136
Query: 92 A-AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAG 150
A L L+ N T + L N+++L L LS+ TI I +L+G
Sbjct: 137 PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSG 184
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 210
T + + LSF + ++ L + LE LD+SS+ + D SV +A
Sbjct: 185 LTNLQQ-----------LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAK 227
Query: 211 VGANLRNLNLSNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 269
+ NL +L +N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D+
Sbjct: 228 L-TNLESLIATNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDL 280
Query: 270 SNTDIKGFIQQVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTF 321
+N I G T+L L +++ L L L L L + Q+ D + P+S
Sbjct: 281 ANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNL 338
Query: 322 KELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
K L +L+L +++D+S +SSL+KL L
Sbjct: 339 KNLTYLTLYFNNISDIS--PVSSLTKLQRL 366
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|219821255|gb|ACL37748.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 97 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 154
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 155 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 193
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 194 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 244
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 245 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 298
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 299 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 356
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 357 IS--PVSSLTKLQRL 369
>gi|219821300|gb|ACL37778.1| internalin A [Listeria monocytogenes]
gi|219821378|gb|ACL37830.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LKYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|22347548|gb|AAM95919.1| internalin A precursor [Listeria monocytogenes]
gi|22347558|gb|AAM95924.1| internalin A precursor [Listeria monocytogenes]
gi|22347560|gb|AAM95925.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|22347562|gb|AAM95926.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|125538950|gb|EAY85345.1| hypothetical protein OsI_06723 [Oryza sativa Indica Group]
Length = 958
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 148/354 (41%), Gaps = 57/354 (16%)
Query: 4 LKELDLSRCVKVTDAGM------KHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLD 57
L LDLS+ + G+ + L S+S L L LS TGL + L +L L LD
Sbjct: 113 LAYLDLSQNNLIGGDGVSPSPLPRFLGSLSDLRYLNLSFTGLAGEIPPQLGNLTRLRHLD 172
Query: 58 L----GGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTK 113
L GGL D+ L ++ LEYLD+ V N A+V W GV
Sbjct: 173 LSSNVGGLYSGDISW--LSGMSSLEYLDM---SVVNLNASV------------GWAGVVS 215
Query: 114 LPNISSLECLNLSNCTIDSI--LEGNENKAPLAKISLAGTTFINEREA-FLYIETSLLSF 170
N+ SL L LS+C + + N L K+ L+ T IN A + + L++
Sbjct: 216 --NLPSLRVLALSDCGLTAAPSPPARANLTRLQKLDLS-TNVINTSSANSWFWDVPTLTY 272
Query: 171 LDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
LD+S ++LS L M L L+L G+D V M+ L L + + +S
Sbjct: 273 LDLSGNALSGVFPDALGNMTNLRVLNLQ----GNDMVGMIPATLQRLCGLQVVDLTVNSV 328
Query: 229 G--VGILAGHLP-----NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 281
+ LP L++L LS + + ++ M L +D+S + G
Sbjct: 329 NGDMAEFMRRLPRCVFGKLQVLQLSAVNMSGHLPKWIGEMSELTILDLSFNKLSG----- 383
Query: 282 GAETDLVLSLTALQNLNHLE-RLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++ L + +L NL L NL +S+ L + E I LSL N S+
Sbjct: 384 ----EIPLGIGSLSNLTRLFLHNNLLNGSLSEEHFADLVSL-EWIDLSLNNLSM 432
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 61/286 (21%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+T L++LDLS V T + + TL L LS L+ L ++ NL VL+L G
Sbjct: 242 LTRLQKLDLSTNVINTSSANSWFWDVPTLTYLDLSGNALSGVFPDALGNMTNLRVLNLQG 301
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNLAWTGVTKLPNISSL 120
+ ++ +LQ L L+ +DL + V+ A ++ PR F L + L
Sbjct: 302 NDMVGMIPATLQRLCGLQVVDLTVNSVNGDMAEFMRRLPRCVFGKL---------QVLQL 352
Query: 121 ECLNLSNCTIDSILEGNE------------NKAPLAKISLAGTTFINEREAFLYIETSLL 168
+N+S I E +E + PL SL+ T L++ +LL
Sbjct: 353 SAVNMSGHLPKWIGEMSELTILDLSFNKLSGEIPLGIGSLSNLT-------RLFLHNNLL 405
Query: 169 SFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 228
N SLS F + +LE +DLS L NL++
Sbjct: 406 ------NGSLSEEHF-ADLVSLEWIDLS------------------LNNLSMEIKPSWKP 440
Query: 229 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
++ + P++ Q+ + +++ PS+K++DISN I
Sbjct: 441 PCKLVYAYFPDV--------QMGPHFPAWIKHQPSIKYLDISNAGI 478
>gi|356575411|ref|XP_003555835.1| PREDICTED: F-box/LRR-repeat protein 2-like [Glycine max]
Length = 418
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 54/286 (18%)
Query: 1 MTCLKELDLSRCVKVTDAGMK----HLLSISTLEKLWLSETGLTADGI-ALLSSLQNLSV 55
TCLK L+L C +TDAGMK HL + +L+ + + LT G+ A+ +L +
Sbjct: 109 FTCLKILNLHNCKGITDAGMKAIGEHLSLLQSLDVSYCRK--LTDKGLSAVAKGCCDLRI 166
Query: 56 LDLGGLP-VTDLVLRSL-QVLTKLEYLDLWG-SQVSNRGAAVLKM-FPRLSFL------N 105
L + G VTD VL +L + LE L L G + +++ G L R+ FL N
Sbjct: 167 LHMAGCRFVTDGVLEALSKNCGNLEELGLHGCTSITDNGLINLASGCRRIRFLDINKCSN 226
Query: 106 LAWTGV--------TKLPNISSLECLNLSNCTIDSILE-----------GNENKAPLAKI 146
GV + L + L+C + + TI S+ E G + + A
Sbjct: 227 ATDVGVSSVSRACSSSLKTLKLLDCYKIGDETILSLAEFCGNLETLIIGGCRDVSADAIR 286
Query: 147 SLA---GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSS-MIGD 202
SLA G++ N R + L++S+SSLS C L+Q + LE LD+ + D
Sbjct: 287 SLAAACGSSLKNLRMDWC---------LNISDSSLS--CVLSQCRNLEALDIGCCEELTD 335
Query: 203 DSVEMVACV--GANLRNLNLSNT-RFSSAGVGILAGHLPNLEILSL 245
+ ++++ G +L+ L +SN + + AG+GI+ G +L+ L +
Sbjct: 336 AAFQLLSNEEPGLSLKILKISNCPKITVAGIGIIVGKCTSLQYLDV 381
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 93 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 150
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 151 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 189
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 190 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 240
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 241 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 294
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 295 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 352
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 353 IS--PVSSLTKLQRL 365
>gi|406830743|ref|ZP_11090337.1| hypothetical protein SpalD1_03864 [Schlesneria paludicola DSM
18645]
Length = 304
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 164 ETSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLS 221
E + FL ++ L L ++L+ L +S + I DDS +++ LR+L +
Sbjct: 71 ELPAIEFLGTGDTELQPATLRALQGKRSLKRLSISFAKISDDSAKLLG----TLRSLEVL 126
Query: 222 NTRFSSAGVGILAGHLPNL---EILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 278
R + G + NL + L+LS DD A+ + MP LK + + + F+
Sbjct: 127 ELRAQVEIHPKVLGEVFNLTSLKELTLSDRLADDPAMEELRRMPYLKTLTVRSV----FV 182
Query: 279 QQVG-AETDLVLSLTAL----------QNLNHLERLNLEQT-----QVSDATLFPLSTFK 322
G A V SL L + + HL L+L V+D L L FK
Sbjct: 183 SDAGLASLRQVKSLRNLRILLGPKVTEEGVRHLSELDLADLDITYLNVTDKELKSLRKFK 242
Query: 323 ELIHLSLRNAS-LTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 367
L L L +A+ +TD ++ LS LS+L L I DA L+ +G+G +
Sbjct: 243 GLKGLRLVSAAKVTDEAVPFLSELSELKRLDIADAKLSKAGIGQLE 288
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 18 AGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDL-GGLPVTDLVLRSLQVLTK 76
A ++ L +L++L +S ++ D LL +L++L VL+L + + VL + LT
Sbjct: 88 ATLRALQGKRSLKRLSISFAKISDDSAKLLGTLRSLEVLELRAQVEIHPKVLGEVFNLTS 147
Query: 77 LEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVTKLPNISSLECLNLSNCTID 131
L+ L L + L+ P L L + + G+ L + SL L
Sbjct: 148 LKELTLSDRLADDPAMEELRRMPYLKTLTVRSVFVSDAGLASLRQVKSLRNLR------- 200
Query: 132 SILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE 191
IL G K++ G ++E L + +++L+V++ L L + K L+
Sbjct: 201 -ILLG-------PKVTEEGVRHLSE----LDLADLDITYLNVTDKELKS---LRKFKGLK 245
Query: 192 HLDL-SSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEI 242
L L S++ + D++V ++ + + L+ L++++ + S AG+G L LPN +I
Sbjct: 246 GLRLVSAAKVTDEAVPFLSEL-SELKRLDIADAKLSKAGIGQLERALPNCKI 296
>gi|219821261|gb|ACL37752.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|290989491|ref|XP_002677371.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
gi|284090978|gb|EFC44627.1| Hypothetical protein NAEGRDRAFT_67509 [Naegleria gruberi]
Length = 350
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 184 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 243
+ +MK L L ++ + + +++ + +NL LN+SN R + G L + L L
Sbjct: 138 IKEMKQLTVLSIAKNSMQSGGAKLLRNL-SNLTILNISNNRIGNEGWKYLCS-MKQLTKL 195
Query: 244 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERL 303
++SGT I ISY++ P+L ++ S F Q+V + + LT L +N++ +
Sbjct: 196 NISGTNISSEGISYLTNFPNLTELNFSGNTSLRFSQKVQEQLSELKYLTKLV-INYIHPI 254
Query: 304 NLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 363
++ Q + ++L LSL++ + D S +S KLT L + L+++
Sbjct: 255 PIDDLQY-------IHKLEKLTSLSLKSNFMYDASAIHISKCEKLTYLDVAINNLSDAAA 307
Query: 364 GSFKPPRSLKLLDLHGGWL 382
+F +LK L++ +L
Sbjct: 308 EAFSHLPNLKYLNISENYL 326
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 49/277 (17%)
Query: 29 LEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVS 88
L KL L + A L +L L+ L++ + + + S++ LTKL L + + +
Sbjct: 72 LTKLDLRRNFIHAKLAEHLGNLHQLTDLNVDDSFIVEPAIDSIRYLTKLSTLSINSNNLK 131
Query: 89 NRGAAVLKMFPRLSFLNLAWT-----GVTKLPNISSLECLNLSNCTIDSILEGNE----- 138
+ ++K +L+ L++A G L N+S+L LN+SN I GNE
Sbjct: 132 TKELKIIKEMKQLTVLSIAKNSMQSGGAKLLRNLSNLTILNISNNRI-----GNEGWKYL 186
Query: 139 -NKAPLAKISLAGTTFINEREAFL----------YIETSLLSFLDVSNSSLSRFCFLTQM 187
+ L K++++GT +E ++L + + L F LS +LT++
Sbjct: 187 CSMKQLTKLNISGTNISSEGISYLTNFPNLTELNFSGNTSLRFSQKVQEQLSELKYLTKL 246
Query: 188 -------------------KALEHLDLSSSMIGDDS-VEMVACVGANLRNLNLSNTRFSS 227
+ L L L S+ + D S + + C L L+++ S
Sbjct: 247 VINYIHPIPIDDLQYIHKLEKLTSLSLKSNFMYDASAIHISKC--EKLTYLDVAINNLSD 304
Query: 228 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL 264
A + HLPNL+ L++S + + + MP L
Sbjct: 305 AAAEAFS-HLPNLKYLNISENYLSKKGVELLRNMPQL 340
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 238 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 295
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 296 IS--PVSSLTKLQRL 308
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959438|gb|ABI27246.1| internalin A [Listeria monocytogenes]
gi|112959450|gb|ABI27252.1| internalin A [Listeria monocytogenes]
gi|112959456|gb|ABI27255.1| internalin A [Listeria monocytogenes]
gi|112959496|gb|ABI27275.1| internalin A [Listeria monocytogenes]
gi|112959498|gb|ABI27276.1| internalin A [Listeria monocytogenes]
gi|112959526|gb|ABI27290.1| internalin A [Listeria monocytogenes]
gi|112959528|gb|ABI27291.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|423606867|ref|ZP_17582760.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
gi|401241057|gb|EJR47449.1| hypothetical protein IIK_03448 [Bacillus cereus VD102]
Length = 766
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|317495623|ref|ZP_07953990.1| hypothetical protein HMPREF0432_00592 [Gemella morbillorum M424]
gi|316914242|gb|EFV35721.1| hypothetical protein HMPREF0432_00592 [Gemella morbillorum M424]
Length = 982
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 22/139 (15%)
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK--GFIQQ------VGAETDLVLSL 291
L+ L +S T I DY S++ +P+L+ ID S D++ F++ V A + + ++
Sbjct: 628 LKQLYVSRTGIKDY--SFIKNIPTLEGIDFSENDVQDISFLKDYPNLKLVAAAGNNIKNI 685
Query: 292 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHL---SLRNASLTDV-SLHQLSSLSK 347
L+NL +LE LNL+ ++SD +S K+L HL SL N ++T + +L+ S LS+
Sbjct: 686 DVLKNLKNLESLNLDNNKISD-----ISALKDLAHLKAVSLENNNITKLDALNNKSELSR 740
Query: 348 L---TNLSIRDAVLTNSGL 363
L N + A L N+ L
Sbjct: 741 LFLSNNSGLELATLKNNNL 759
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|223698871|gb|ACN19154.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 9 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 66
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 67 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 105
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 106 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 156
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 157 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 211 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 268
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 269 IS--PVSSLTKLQRL 281
>gi|217958905|ref|YP_002337453.1| putative internalin [Bacillus cereus AH187]
gi|423354088|ref|ZP_17331714.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|423569655|ref|ZP_17545901.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
gi|217066693|gb|ACJ80943.1| putative internalin [Bacillus cereus AH187]
gi|401087798|gb|EJP95998.1| hypothetical protein IAU_02163 [Bacillus cereus IS075]
gi|401205874|gb|EJR12672.1| hypothetical protein II7_02877 [Bacillus cereus MSX-A12]
Length = 766
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ V L+ L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITNVA--PLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|56698247|ref|YP_168620.1| hypothetical protein SPO3424 [Ruegeria pomeroyi DSS-3]
gi|56679984|gb|AAV96650.1| leucine rich repeat protein [Ruegeria pomeroyi DSS-3]
Length = 556
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 19/150 (12%)
Query: 215 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 274
LR+L+L+NT+ S + LA L L LSL+ TQ+ D I+ ++ + L + ++NT +
Sbjct: 49 LRDLDLNNTQVSD--IAPLAA-LTRLNALSLNDTQVSD--IAPLAALTRLTMLSLNNTQV 103
Query: 275 KGFIQQVGAETDL---------VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 325
I + A T L V + L L L L+L +TQVSD + L+ L
Sbjct: 104 SD-IAPLAALTRLTGLWLHNTQVSDIAPLAALTRLTGLSLNKTQVSD--IAALAALTRLT 160
Query: 326 HLSLRNASLTDVSLHQLSSLSKLTNLSIRD 355
LSL N ++D++ L+SL++LT LS+ +
Sbjct: 161 TLSLNNTQVSDIA--PLASLTRLTTLSLEN 188
>gi|423409412|ref|ZP_17386561.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
gi|401655354|gb|EJS72886.1| hypothetical protein ICY_04097, partial [Bacillus cereus BAG2X1-3]
Length = 776
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 38/257 (14%)
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLSRF 181
++N +D L+ + NK L + + INE +E L I+T + S ++
Sbjct: 187 VANVIVDKKLQQHINKYNLDRKN------INEPITKEDLLKIKTLTI----YSGEGINEI 236
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPN 239
L MK LE L L + + D ++ + L+ L+LS+ S +L N
Sbjct: 237 AGLEYMKNLEKLTLRETNVTD-----ISAISELRYLKFLDLSSNLIESIQP---VSNLEN 288
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ--QVGAETDLVLSLTALQNL 297
L++L L +I D ++ +S M +K +D+ +IK V + +L L+ + NL
Sbjct: 289 LDMLFLRDNKIAD--LTPLSQMKKIKTLDLIGNNIKDLTPLFTVASVKELYLANNQISNL 346
Query: 298 NHLERLN------LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ +E+LN + Q+SD P+S +LI L + ++ L D+S LS L KL L
Sbjct: 347 SGIEKLNNVKLLWIGNNQISDVE--PISKMSKLIELEIADSDLKDIS--PLSKLGKLQVL 402
Query: 352 SIRDAVLTN-SGLGSFK 367
++ + +++ S LG K
Sbjct: 403 NLEENFISDISALGELK 419
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959536|gb|ABI27295.1| internalin A [Listeria monocytogenes]
gi|112959546|gb|ABI27300.1| internalin A [Listeria monocytogenes]
Length = 734
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|195127591|ref|XP_002008252.1| GI11918 [Drosophila mojavensis]
gi|193919861|gb|EDW18728.1| GI11918 [Drosophila mojavensis]
Length = 923
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 35/198 (17%)
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISLAGTTFIN-EREAFLYI 163
+AW LPN+ LE +SNC+I+ + + +N L K+ ++ + + + F YI
Sbjct: 270 IAWATFPSLPNLLELE---ISNCSIEYVSRKAFKNVTNLRKLFISNNKIMTIDIDTFYYI 326
Query: 164 ETSLLSFLDVSNSSLSRFCFLTQMKALE-----------------------HLDLSSSMI 200
L +LD+S +++ + +L M LE +LDLS S I
Sbjct: 327 PK--LQYLDLSFTNVLNYNYLFSMPTLEMIFNLVYGLKIHQAAFKYLPDLIYLDLSHSKI 384
Query: 201 GDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAI---SY 257
+S +G L+ L+L T F G+ + LE L LSG Y I ++
Sbjct: 385 TKNSAVAFTYLGDKLKYLSLCYTSFPMMSNGLFKNTI--LEGLDLSGNPFVSYNILDDAF 442
Query: 258 MSMMPSLKFIDISNTDIK 275
S +LKF+ ++++K
Sbjct: 443 DSTSETLKFLFFEHSNLK 460
>gi|44888781|gb|AAS48162.1| LRR protein WM1.2 [Aegilops tauschii]
Length = 1060
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 152/363 (41%), Gaps = 60/363 (16%)
Query: 46 LLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS---QVSNRGAAVLKMFPRLS 102
LL + NL L+L G+P T V L L+KL+YLDL + S+ + + +LS
Sbjct: 142 LLGFMGNLRYLNLSGIPFTGTVPSQLGNLSKLQYLDLGQTGEFSDSDMYSTDITWLTKLS 201
Query: 103 FL------NLAWTGVTKLPN----ISSLECLNLSNCTIDSILEG--NENKAPLAKISLAG 150
FL + G+ P+ I SL ++LS C++ S + + N L K+ L+
Sbjct: 202 FLKFLRMRGITLEGIGDWPHTLNRIPSLRVIDLSLCSLHSANQSLPHLNLTKLEKLDLSL 261
Query: 151 TTFINEREAFLYIETSLLSFLDVSNSSL-SRFC-FLTQMKALEHLDLSSS------MIGD 202
F + + + + L +L + ++SL +F L M +L+ LD+S + MIG
Sbjct: 262 NYFEHSLGSGWFWKAISLKYLALGHNSLFGQFPDTLGNMTSLQVLDVSYNWNPDMMMIGK 321
Query: 203 -----DSVEMV-------------------ACVGANLRNLNLSNTRFSSAGVGILAGHLP 238
S+E++ C NL+ L+LS+ F+ L G
Sbjct: 322 LLKNLCSLEIIDLDGNEISGEIEVLMESWPQCTWKNLQELDLSSNTFTGTLPNFL-GDFT 380
Query: 239 NLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLN 298
+L LSLSG + + + L +D+S+ G I+ L NL
Sbjct: 381 SLRTLSLSGNSLAGPIPPQLGNLTCLTSLDLSSNHFTGSIRD------------ELGNLR 428
Query: 299 HLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 358
+L L L+ +++ + L L + L + LT ++ L+ LT+L + L
Sbjct: 429 YLTALELQGNEITGSIPLQLGNLTCLTSIDLGDNHLTGSIPAEVGKLTYLTSLDLSSNHL 488
Query: 359 TNS 361
S
Sbjct: 489 NGS 491
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 44/314 (14%)
Query: 1 MTCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGG 60
+TCL LDLS T + L ++ L L L +T L +L L+ +DLG
Sbjct: 403 LTCLTSLDLSSN-HFTGSIRDELGNLRYLTALELQGNEITGSIPLQLGNLTCLTSIDLGD 461
Query: 61 LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGAAVLKMFPRLSFLNL-----AWTGVT--- 112
+T + + LT L LDL + ++ G+ +M ++ ++L ++TGV
Sbjct: 462 NHLTGSIPAEVGKLTYLTSLDLSSNHLN--GSVPTEMGSLINLISLDLRNNSFTGVITGE 519
Query: 113 KLPNISSLECLNLSNCTIDSILE--------------GNENKAPL----------AKISL 148
N++SL+ ++LS + +L G+ PL ++++
Sbjct: 520 HFANLTSLKQIDLSYNNLKMVLNSDWRAPFTLESASFGSCQMGPLFPPWLQQLKTTQLNI 579
Query: 149 AGTTFINEREAFLYIETSLLSFLDVSNSSL--SRFCFLTQMKALEHLDLSSSMIGDDSVE 206
+ E + + S ++ LD+SN+ + S + M A E L LSS+ +
Sbjct: 580 SSNGLKGEFPDWFWSAFSNVTHLDISNNQINGSLPAHMDSM-AFEELHLSSNRLAGP--- 635
Query: 207 MVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKF 266
+ + N+ L++SN FS L P L++L + I Y + + L++
Sbjct: 636 -IPTLPINITLLDISNNTFSETIPSNLVA--PGLKVLCMQSNNIGGYIPESVCKLEQLEY 692
Query: 267 IDISNTDIKGFIQQ 280
+D+SN ++G I Q
Sbjct: 693 LDLSNNILEGKIPQ 706
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|112959518|gb|ABI27286.1| internalin A [Listeria monocytogenes]
gi|112959520|gb|ABI27287.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|307219284|gb|ADN39447.1| RT09985p [Drosophila melanogaster]
Length = 588
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 45/304 (14%)
Query: 90 RGAAVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSI-LEGNENKAPLAKISL 148
RG ++ P ++AW K+P + L+ +SNC+I+ + E N + L ++ +
Sbjct: 139 RGNNFAELIPDAEAQSIAWATFPKMPRLVELD---ISNCSIEYVSKEAFRNVSNLRRLFM 195
Query: 149 AGTTFIN-EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALE---------------- 191
+ + + F Y++ + +LD+S ++ + + Q+ LE
Sbjct: 196 SDNKIMTISHDTFYYVQG--VQYLDLSFTNFLTYSYQLQLPTLEMALSLIYGLKIQQNVF 253
Query: 192 -------HLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILS 244
+LDLS S + +S A +G L+ L+L T I + LE L
Sbjct: 254 KYLPELIYLDLSHSKMTRNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKNTV--LEGLD 311
Query: 245 LSGTQIDDYAI---SYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTA 293
LSG Y I ++ + +LK++ ++IK +Q +G + + +LT
Sbjct: 312 LSGNPYLSYNIIDDAFDGIANTLKYLYFERSNIKDLEWSKSLKNLQVLGLAGNNINALTP 371
Query: 294 --LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
Q+L LE L+L V + L L+LR+ ++ +S L +L L
Sbjct: 372 AMFQSLESLEILDLSSNHVGNWYRSAFHNNSALRVLNLRSNTINMLSNEMLKDFERLDYL 431
Query: 352 SIRD 355
S+ D
Sbjct: 432 SLGD 435
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|423607623|ref|ZP_17583516.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
gi|401239997|gb|EJR46402.1| hypothetical protein IIK_04204, partial [Bacillus cereus VD102]
Length = 814
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 114 LPNISSLECL-NLSNCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFL 171
+ ++S LE + NL N T++ + LE + + L ++ T+ + E + L
Sbjct: 235 IEDVSGLEYMKNLENLTLEEVKLENIKFISDLRQLKSLSITYGELEDIGPLAELEHIESL 294
Query: 172 DVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVG 231
+ N+ +S L+QMK ++ LDL+S+ I D A +LR L ++N + S+A
Sbjct: 295 SLRNNKISDLSPLSQMKKIKLLDLNSNYIKDIKPLFTA---KSLRTLTVANNQISNAN-- 349
Query: 232 ILAG--HLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVL 289
LAG L N++ LSLS + + I +++ M L +D+S +++
Sbjct: 350 -LAGIEQLKNVKSLSLSNNGLTN--IEHITPMKKLVELDLSKNELE-------------- 392
Query: 290 SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 337
++ L ++ ++ LNLE+ +SD T PLS L L L + + DV
Sbjct: 393 NIEPLSRMSTVQSLNLEENYISDIT--PLSQLTGLYDLKLASNEIRDV 438
>gi|223698625|gb|ACN18990.1| internalin A [Listeria monocytogenes]
gi|223698736|gb|ACN19064.1| internalin A [Listeria monocytogenes]
gi|223698739|gb|ACN19066.1| internalin A [Listeria monocytogenes]
gi|223698847|gb|ACN19138.1| internalin A [Listeria monocytogenes]
gi|223698904|gb|ACN19176.1| internalin A [Listeria monocytogenes]
gi|223698955|gb|ACN19210.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 9 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 66
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 67 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 105
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 106 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 156
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 157 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 210
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 211 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 268
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 269 IS--PVSSLTKLQRL 281
>gi|112959552|gb|ABI27303.1| internalin A [Listeria monocytogenes]
gi|112959556|gb|ABI27305.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 31 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 88
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 89 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 127
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 128 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 178
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 179 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 232
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 233 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 290
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 291 IS--PVSSLTKLQRL 303
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|313485056|gb|ADR53002.1| InlA [Listeria monocytogenes]
Length = 789
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|22347566|gb|AAM95928.1| internalin A precursor [Listeria monocytogenes]
Length = 746
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 38 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 95
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 96 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 134
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 135 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 185
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 186 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 239
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 240 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 297
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 298 IS--PVSSLTKLQRL 310
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|219821390|gb|ACL37838.1| internalin A [Listeria monocytogenes]
Length = 744
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 56/317 (17%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 36 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 93
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 94 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 132
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 133 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 183
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ----- 279
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 184 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 237
Query: 280 -----QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASL 334
++GA + + +++ L L L L L + Q+ D + P+S K L +L+L ++
Sbjct: 238 KLTELKLGA--NQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNI 293
Query: 335 TDVSLHQLSSLSKLTNL 351
+D+S +SSL+KL L
Sbjct: 294 SDIS--PVSSLTKLQRL 308
>gi|130774815|gb|ABO32420.1| InlA [Listeria monocytogenes]
gi|194239404|emb|CAQ76842.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|85679270|gb|ABC72051.1| InlC2 [Listeria monocytogenes]
Length = 547
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 26/190 (13%)
Query: 171 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGV 230
L++ ++ ++ L + + L+LS + + +V +A + + ++ L+L++T+ + V
Sbjct: 102 LELKDNQITNLTPLKNLTKITELELSGNPL--KNVSAIAGLQS-IKTLDLTSTQITD--V 156
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLS 290
LAG L NL++L L QI D IS ++ + +L+++ I NT +
Sbjct: 157 TPLAG-LSNLQVLYLDLNQITD--ISPLAGLTNLQYLSIGNTQVS--------------D 199
Query: 291 LTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTN 350
LT L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L
Sbjct: 200 LTPLANLSKLTNLRADDNKISD--ISPLASLPNLIEVHLKDNQISDVS--PLANLSNLFI 255
Query: 351 LSIRDAVLTN 360
+++ + +TN
Sbjct: 256 VTLTNQTITN 265
>gi|194761256|ref|XP_001962845.1| GF15644 [Drosophila ananassae]
gi|190616542|gb|EDV32066.1| GF15644 [Drosophila ananassae]
Length = 1238
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLD-LSSSMIGDDSVEMVACVG-ANLRNLNLSNTRF 225
L L +S + L+ C L ++ + HL+ L G ++ VG + LR LN+S+
Sbjct: 228 LKVLKISGNRLAN-CNLINLQNMNHLEELHLDRNGLKTLPQRFLVGLSELRLLNISHNLL 286
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
S I AG L LE L +SG ++ L+ +D+S+ + F A
Sbjct: 287 SELPRDIFAGAL-KLERLLISGNRLTVLPFQLFQTAGDLQVLDLSDNRLLSFPDNFFARN 345
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
HL +L+L++ Q+ L +EL HL L SL + SL
Sbjct: 346 ------------GHLRQLHLQRNQLKSLGKQSLYNLRELRHLDLSQNSLASIDRKAFESL 393
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDL 377
+L L+I LT F+P SLK LDL
Sbjct: 394 GRLLALNISGNNLTMLSSTIFQPLHSLKQLDL 425
>gi|147769371|emb|CAN72496.1| hypothetical protein VITISV_010511 [Vitis vinifera]
Length = 1241
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 20/278 (7%)
Query: 136 GNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHL 193
GN +K + ++S G + E F S L +D SN+SL+ L+ + L L
Sbjct: 253 GNLSKLNILQLSSNGISGPIPTEIF---NISSLQEIDFSNNSLTGEIPSNLSHCRELRVL 309
Query: 194 DLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDY 253
LS + + + + +NL L LS + + G+ G+L NL IL L I
Sbjct: 310 SLSFNQFTGGIPQAIGSL-SNLEGLYLSYNKLT-GGIPREIGNLSNLNILQLGSNGISGP 367
Query: 254 AISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDA 313
+ + + SL+ ID SN + G L + ++L +L+ L L Q +S
Sbjct: 368 IPAEIFNISSLQIIDFSNNSLSG-----------SLPMDICKHLPNLQGLYLLQNHLSGQ 416
Query: 314 TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLK 373
LS EL++LSL ++ +LSKL ++S+R L S SF +LK
Sbjct: 417 LPTTLSLCGELLYLSLAVNKFRGSIPREIGNLSKLEDISLRSNSLVGSIPTSFGNLMALK 476
Query: 374 LLDLHGGWL--LTEDAILQFCKMHPRIEVWHELSVICP 409
LDL +L +AI ++ + V + LS P
Sbjct: 477 YLDLGMNFLTGTVPEAIFNISELQILVLVQNHLSGSLP 514
>gi|328786015|ref|XP_394034.4| PREDICTED: slit homolog 1 protein-like [Apis mellifera]
Length = 1071
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 186/437 (42%), Gaps = 70/437 (16%)
Query: 27 STLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQ 86
+ +EKL +S L++ + L+ L+ L LD+ G + +L + L EYLDL +
Sbjct: 171 AKIEKLEISNGTLSSLPVEALAPLKKLKRLDMHGNKIKELKRNQFKGLRDTEYLDLSHNL 230
Query: 87 VSNRGAAVLKMFPRLSFLNLAWTGVTKLP-----NISSLECLNLSNCTIDSILEGNENKA 141
+S + L ++ + N++ + L S L+ LNLS+ I L+ N +
Sbjct: 231 ISKLDGSHLADLTKMGWCNMSHNAIADLKRGTFARNSLLKVLNLSHNKIRK-LDSNTFRG 289
Query: 142 P--LAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSR--FCFLTQMKALEHLDLSS 197
L ++ L+ IN+ + + + +D++ + + + F Q++ E LD+S
Sbjct: 290 MRFLIRLYLSDNQ-INDVGRGTFGPVTRIGTIDLARNFIKKIDFQMFNQLQFAELLDVSE 348
Query: 198 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDD----- 252
+ + VE ++ L ++LS S G + N+ +L LS ++++
Sbjct: 349 NFVT--VVEKLSFKDLYLTRIDLSRNEISKIEPGAFENCV-NITLLDLSHNKLENISKYS 405
Query: 253 -----YA----ISYMSM----------MPSLKFIDISNTDIKGFIQQVGAE------TDL 287
YA +SY + M LK +++SN I +Q + DL
Sbjct: 406 FDSATYATELQLSYNQLTSLNQVPLHNMTGLKVLNVSNNLIHSVPRQTFPKLYELHTIDL 465
Query: 288 V------LSLTALQNLNHLERLNLEQT---QVSDATLFPLSTFKELIHLSLRNASLTDVS 338
+ Q L L LNL ++ +T PL+T L+ L + LTDV+
Sbjct: 466 SHNNLSEIHNAVFQTLFSLRSLNLSYNSLERIKPSTFGPLAT---LLELDMSYNRLTDVA 522
Query: 339 LHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHPRI 398
L+ L +L++R+ LT F+ P SL LD +E+++ + P +
Sbjct: 523 RSSLTRLPSCRSLTVRNNRLTK----IFQLPISLASLD------FSENSLEEI----PTV 568
Query: 399 EVWHELSVICPSDQIGS 415
+VW ++ + D G+
Sbjct: 569 DVWPTMNALLSLDLTGN 585
>gi|223006802|gb|ACM69358.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 55/320 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 92 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 146
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 147 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ---- 190
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 191 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 236
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 237 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 290
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 291 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 348
Query: 332 ASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 349 NNISDIS--PVSSLTKLQRL 366
>gi|356551924|ref|XP_003544322.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 652
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 56/372 (15%)
Query: 4 LKELDLSRCVKVTDAGMKHL-LSISTLEKLWLSET-GLTADGIA-LLSSLQNLSVLDLGG 60
L++L L C+ + D G+ L S +++ L LS+ + GIA L S QNL L L
Sbjct: 229 LEDLILEHCLGIEDHGLATLQASCKSMKMLNLSKCQNIGHIGIASLTSGSQNLEKLILSS 288
Query: 61 --LPVTDLVLRSLQVLTKLEYLDLWGSQVSNRG-AAVLKMFPRLSFLNLA-WTGVT--KL 114
+ TDL + LQ ++L+ + L + G A+ + L LNL+ GVT L
Sbjct: 289 SVIVTTDLA-KCLQSFSRLQSVKLDSCLGTKSGLKAIGNLGASLKELNLSKCVGVTDENL 347
Query: 115 PNI----SSLECLNLSNC---TIDSILEGNENKAPLAKISLAGTTFINEREAFLYI-ETS 166
P + LE L+++ C T SI + L + + + ++ RE FL+I
Sbjct: 348 PFLVQPHKDLEKLDITCCHTITHASISSLTNSCLRLTSLRMESCSLVS-REGFLFIGRCQ 406
Query: 167 LLSFLDVSNS--------SLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNL 218
LL LDV+++ S+SR L+ +K L + S MI D+ ++ +A + L+ L
Sbjct: 407 LLEELDVTDTEIDDQGLQSISRCTKLSSLK----LGICS-MITDNGLKHIASSCSKLKQL 461
Query: 219 NL-SNTRFSSAGVGILAGHLPNLEILSLS-GTQIDDYAISYMSMMPSLKFIDISNT---D 273
+L ++R + G+ +A P+LE+++++ + D ++ ++S L+ ++I
Sbjct: 462 DLYRSSRITDEGIVAIALGCPSLEVVNIAYNSNTTDTSLEFLSKCQKLRTLEIRGCPRIS 521
Query: 274 IKGFIQQVGA----------------ETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP 317
KG V +T ++ QNL H++ L V+D L
Sbjct: 522 PKGLSNIVARCRYLEMLDIKKCHKINDTGMIQLAQHSQNLKHIK---LSYCSVTDVGLIA 578
Query: 318 LSTFKELIHLSL 329
L++ L H+S+
Sbjct: 579 LASISCLQHISI 590
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 161/406 (39%), Gaps = 101/406 (24%)
Query: 2 TCLKELDLSRCVKVTDAGMKHLLSISTLEKLWLSET-GLTADGIALLS------------ 48
TCL E DLS +TD K + LE+L L G+T GI ++
Sbjct: 126 TCLVEADLSNRPDLTDVAAKAIAEAVNLERLCLGRCKGITDLGIGCIAVRCSKLRHVGLR 185
Query: 49 ---------------SLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGS-QVSNRGA 92
+ + LDL LP+T+ L + L LE L L + + G
Sbjct: 186 WCIRVTDFGAGLIAIKCKEIRSLDLSYLPITEKCLNHILQLEHLEDLILEHCLGIEDHGL 245
Query: 93 AVLKMFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTT 152
A L+ A K+ N+S +C N+ + I S+ G++N L K+ L+ +
Sbjct: 246 ATLQ----------ASCKSMKMLNLS--KCQNIGHIGIASLTSGSQN---LEKLILSSSV 290
Query: 153 FINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 212
+ T L L S SR L+ + L S + ++ + +G
Sbjct: 291 IVT---------TDLAKCLQ----SFSR---------LQSVKLDSCLGTKSGLKAIGNLG 328
Query: 213 ANLRNLNLSNTRFSSAGVGILAGHLP-------NLEILSLSGTQ-IDDYAISYMS----M 260
A+L+ LNLS VG+ +LP +LE L ++ I +IS ++
Sbjct: 329 ASLKELNLSKC------VGVTDENLPFLVQPHKDLEKLDITCCHTITHASISSLTNSCLR 382
Query: 261 MPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLST 320
+ SL+ S +GF+ + LE L++ T++ D L +S
Sbjct: 383 LTSLRMESCSLVSREGFL--------------FIGRCQLLEELDVTDTEIDDQGLQSISR 428
Query: 321 FKELIHLSLRNASL-TDVSL-HQLSSLSKLTNLSI-RDAVLTNSGL 363
+L L L S+ TD L H SS SKL L + R + +T+ G+
Sbjct: 429 CTKLSSLKLGICSMITDNGLKHIASSCSKLKQLDLYRSSRITDEGI 474
>gi|384179362|ref|YP_005565124.1| internalin [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324325446|gb|ADY20706.1| internalin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 766
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 42/258 (16%)
Query: 103 FLN----LAWTGVTKLPNISSLECLN--LSNCTIDSILEGNENKAPLAKISLAGTTFINE 156
FLN L ++ + +PN+ SL N + + + + L+ L ++L G F
Sbjct: 226 FLNTNEILDYSALKYMPNLKSLTVANAKIKDPSFFTSLK------QLKHLALRGNEF--- 276
Query: 157 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 216
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 277 SDVTPLVKMDNLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLD 333
Query: 217 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 276
LNL+N + ++ + L N+ L+L+G QI+D Y SL D+ T K
Sbjct: 334 YLNLANNKITNV---VPLSALKNVTYLTLAGNQIEDIKPLY-----SLPLKDLVLTRNK- 384
Query: 277 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
V L+ ++ + LE L + + ++ D T PLS +L L L N L D
Sbjct: 385 -----------VKDLSGIEQMKQLEELWIGKNEIKDVT--PLSKMTQLKQLHLPNNELKD 431
Query: 337 VSLHQLSSLSKLTNLSIR 354
++ LSSL L L +
Sbjct: 432 IT--PLSSLVNLQKLDLE 447
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 58/211 (27%)
Query: 168 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDS--VEMVACVGANLRNLNLSNTRF 225
L L V+N+ + F T +K L+HL L + D + V+M NL +L+LSN +
Sbjct: 244 LKSLTVANAKIKDPSFFTSLKQLKHLALRGNEFSDVTPLVKM-----DNLDSLDLSNNKI 298
Query: 226 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET 285
++ I + N++ L LSG QI+D
Sbjct: 299 TNVAPLI---EMKNVKSLYLSGNQIED--------------------------------- 322
Query: 286 DLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 345
+TAL + L+ LNL ++++ + PLS K + +L+L + +Q+ +
Sbjct: 323 -----VTALAKMEQLDYLNLANNKITN--VVPLSALKNVTYLTL--------AGNQIEDI 367
Query: 346 SKLTNLSIRDAVLTNSGLGSFKPPRSLKLLD 376
L +L ++D VLT + + +K L+
Sbjct: 368 KPLYSLPLKDLVLTRNKVKDLSGIEQMKQLE 398
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 55/320 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 92 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 146
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 147 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ---- 190
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 191 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 236
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 237 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 290
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 291 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 348
Query: 332 ASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 349 NNISDIS--PVSSLTKLQRL 366
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|225452694|ref|XP_002276873.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 783
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 187 MKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLS 246
+ L HLDLS + + + + + + L +L+LS+ + + + G L L L LS
Sbjct: 123 LTKLTHLDLSYNQLNGNIPQQMYTL-TELTHLDLSSNQMTGP-IPHQIGTLTELIFLHLS 180
Query: 247 GTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ-VGAETDLV---LSLT--------AL 294
G ++ S + L +D+S+ + G I +G T+L+ LS T +L
Sbjct: 181 GNELTGAIPSSFGRLTKLTHLDLSSNQLTGPIPHPIGTLTELIFLHLSWTELTGAIPSSL 240
Query: 295 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
+L L L+L Q++ + + T EL HL L N L+ HQ+ +L++LT L +
Sbjct: 241 GHLTKLTHLDLSYNQLNGSISHQMYTLTELTHLDLSNNQLSGSIPHQIGTLTELTYLDLS 300
Query: 355 DAVLTN---SGLGSFKPPRSLKL 374
+ LT S LGS SL L
Sbjct: 301 WSELTGAMPSSLGSLTKLTSLNL 323
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L + N L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|290975915|ref|XP_002670687.1| predicted protein [Naegleria gruberi]
gi|284084248|gb|EFC37943.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 15 VTDAGMKHLLSISTLEKLWLSETGLTADGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVL 74
V + G+ L+S +L L++S + DG +S+L+ L++L++ + + + + L
Sbjct: 117 VFNCGVFDLMS-KSLTTLYISRNNIENDGAKHISALKQLTLLNISSNNIEEEGAKYIGKL 175
Query: 75 TKLEYLDLWGSQVSNRGAAVLKMFPRLSFL-----NLAWTGVT---KLPNISSLECLNLS 126
KL YLD+ + + + GA + +L+ L N+ G KL N++ LE +
Sbjct: 176 EKLTYLDISKNDIRSNGALYISELKQLTSLVISSNNIDEEGAAHLIKLTNLTELETVR-- 233
Query: 127 NCTIDSILEGNENKAPLAK--------ISLA-GTTFINEREAFLYIETSLLSFLDV-SNS 176
NE A AK I+L FI + A E L+ L++ SN
Sbjct: 234 ----------NEFGAEGAKHISEMKQLINLNINDNFIGDEGAKYISEMKQLTILNIGSNE 283
Query: 177 SLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVAC-VGANLRNLNL---SNTRFSSAGV 230
R F Q+ L L I D+S++ AC + L+NLNL S + G
Sbjct: 284 ITDRVNFENFGQLNQLTEL-----YIEDNSIQTNACKYISQLQNLNLLDISGNNVDAEGA 338
Query: 231 GILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTD----IKGFIQQVGAETD 286
++ + L L + + + ++S M L+++ + + D +K I+++ + D
Sbjct: 339 KYIS-QMNQLTELEIHTNSLGNEGAKHISTMKELEYLYLCDNDVSVEVKQHIREIYQDID 397
Query: 287 LVLSL 291
++L+L
Sbjct: 398 VILNL 402
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 237 LPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG----FIQQVGAETDLVLS-- 290
L L +L++S I++ Y+ + L ++DIS DI+ +I ++ T LV+S
Sbjct: 151 LKQLTLLNISSNNIEEEGAKYIGKLEKLTYLDISKNDIRSNGALYISELKQLTSLVISSN 210
Query: 291 ---------LTALQNLNHLE---------------------RLNLEQTQVSDATLFPLST 320
L L NL LE LN+ + D +S
Sbjct: 211 NIDEEGAAHLIKLTNLTELETVRNEFGAEGAKHISEMKQLINLNINDNFIGDEGAKYISE 270
Query: 321 FKELIHLSLRNASLTD-VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHG 379
K+L L++ + +TD V+ L++LT L I D + + ++L LLD+ G
Sbjct: 271 MKQLTILNIGSNEITDRVNFENFGQLNQLTELYIEDNSIQTNACKYISQLQNLNLLDISG 330
Query: 380 GWLLTEDA 387
+ E A
Sbjct: 331 NNVDAEGA 338
>gi|423398544|ref|ZP_17375745.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
gi|401647022|gb|EJS64634.1| hypothetical protein ICU_04238, partial [Bacillus cereus BAG2X1-1]
Length = 779
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 38/257 (14%)
Query: 125 LSNCTIDSILEGNENKAPLAKISLAGTTFINE---REAFLYIETSLLSFLDVSNSSLSRF 181
++N +D L+ + NK L + + INE +E L I+T + S ++
Sbjct: 187 VANVIVDKKLQQHINKYNLDRKN------INEPITKEDLLKIKTLTI----YSGEGINEI 236
Query: 182 CFLTQMKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGVGILAGHLPN 239
L MK LE L L + + D ++ + L+ L+LS+ S +L N
Sbjct: 237 AGLEYMKNLEKLTLRETNVTD-----ISAISELRYLKFLDLSSNLIESIQP---VSNLEN 288
Query: 240 LEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDLVLSLTALQNL 297
L++L L +I D ++ +S M +K +D+ +IK + V + +L L+ + NL
Sbjct: 289 LDMLFLRDNKIAD--LTPLSQMKKIKTLDLIGNNIKDLTPLFTVASVKELYLANNQISNL 346
Query: 298 NHLERLN------LEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 351
+ +E+LN + Q+SD P+S +LI L + ++ L D+S LS L KL L
Sbjct: 347 SGIEKLNNVKLLWIGNNQISDVE--PISKMSKLIELEIADSDLKDIS--PLSKLGKLQVL 402
Query: 352 SIRDAVLTN-SGLGSFK 367
++ + +++ S LG K
Sbjct: 403 NLEENFISDISALGELK 419
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 55/320 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 92 DGVEYLN---NLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTG 146
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 147 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ---- 190
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 191 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 236
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 237 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 290
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 291 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 348
Query: 332 ASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 349 NNISDIS--PVSSLTKLQRL 366
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTSLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|324096390|gb|ADY17724.1| RT11110p [Drosophila melanogaster]
Length = 517
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 155 NEREAFLYIETSLLSFLDVSNSSLSRF--CFLTQMKALEHLDLSSSMIGDDSVEM-VACV 211
N +E E + L FL +SN++L F C L + LE L L S+ + + ++M +
Sbjct: 163 NYQENITLGENANLRFLSISNNNLRDFQWCHLRVLPKLEELHLHSNWL--EHLDMGIFYA 220
Query: 212 GANLRNLNLSNTR-FSSAGVGILA-GHLPNLEILSLSGTQI---DDYAISYMSMMPSLKF 266
NLR LN+SN F +A G + LE+L S + DD + + +L
Sbjct: 221 LPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDSVFCRLKKLRTLNL 280
Query: 267 I--DISNTDIKGFIQ-------QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATL-- 315
I+ + F+ + +L NL LE+L+L + + L
Sbjct: 281 WLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKLDLSKNNIQKLGLRV 340
Query: 316 FPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLL 375
F ++LI+L L N + D+ LSS+ + L +R L + L F P R L+LL
Sbjct: 341 FGERILRKLIYLDLSNNYIADLHPLALSSMPFIKELRLRRNRLVSLDLRMFAPLRQLQLL 400
Query: 376 DLH 378
++
Sbjct: 401 TIN 403
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 52/315 (16%)
Query: 47 LSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPRLSFLN 105
L L NL+ ++ +TD+ L+ LTKL + + +Q+++ A L L+ N
Sbjct: 94 LEYLNNLTQINFSNNQLTDIT--PLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFN 151
Query: 106 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 165
T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 152 NQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ--------- 190
Query: 166 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 225
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L +N +
Sbjct: 191 --LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIATNNQI 241
Query: 226 SS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE 284
S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G
Sbjct: 242 SDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLT 295
Query: 285 --TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 336
T+L L +++ L L L L L + Q+ D + P+S K L +L+L +++D
Sbjct: 296 KLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD 353
Query: 337 VSLHQLSSLSKLTNL 351
+S +SSL+KL L
Sbjct: 354 IS--PVSSLTKLQRL 366
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 151/320 (47%), Gaps = 55/320 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 92 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 146
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 147 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ---- 190
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF + ++ L + LE LD+SS+ + D SV +A + NL +L
Sbjct: 191 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIA 236
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 237 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 290
Query: 280 QVGAE--TDLVLSLTALQN------LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L + N L L L L + Q+ D + P+S K L +L+L
Sbjct: 291 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 348
Query: 332 ASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 349 NNISDIS--PVSSLTKLQRL 366
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 55/320 (17%)
Query: 42 DGIALLSSLQNLSVLDLGGLPVTDLVLRSLQVLTKLEYLDLWGSQVSNRGA-AVLKMFPR 100
DG+ L+ NL+ ++ +TD+ L+ LTKL + + +Q+++ A L
Sbjct: 92 DGVEYLN---NLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLANLTNLTG 146
Query: 101 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAF 160
L+ N T + L N+++L L LS+ TI I +L+G T + +
Sbjct: 147 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI------------SALSGLTNLQQ---- 190
Query: 161 LYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL 220
LSF + ++ L + LE LD+SS+ + D + ++A + NL +L
Sbjct: 191 -------LSF----GNQVTDLKPLANLTTLERLDISSNKVSD--ISVLAKL-TNLESLIA 236
Query: 221 SNTRFSS-AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQ 279
+N + S +GIL NL+ LSL+G Q+ D I ++ + +L +D++N I
Sbjct: 237 TNNQISDITPLGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP 290
Query: 280 QVGAE--TDLVL------SLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN 331
G T+L L +++ L L L L L + Q+ D + P+S K L +L+L
Sbjct: 291 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYF 348
Query: 332 ASLTDVSLHQLSSLSKLTNL 351
+++D+S +SSL+KL L
Sbjct: 349 NNISDIS--PVSSLTKLQRL 366
>gi|369938141|gb|AEX25765.1| toll-like receptor 2 type 2 [Gallus gallus]
Length = 732
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 182 CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLSNTRFSSAGV-GILAGHL 237
C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNLS S + G HL
Sbjct: 350 CKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNLSQNSLSDLKMTGKSLFHL 409
Query: 238 PNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFIQQVGAETDLVLSLTALQN 296
NL +L +S + I M P +LK++++S+T I + + + VL ++A
Sbjct: 410 RNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLTTCIPSTLE-VLDVSA--- 463
Query: 297 LNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 354
N+L+ L+ + + L L T E + N +S ++L+S SK L++R
Sbjct: 464 -NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMSISRNKLNSFSK-EELTVR 519
Query: 355 DAVLTNSGLGSFKPPRSL 372
A + + L + RSL
Sbjct: 520 GAQVGSVQLSLMECHRSL 537
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,573,803,683
Number of Sequences: 23463169
Number of extensions: 251412991
Number of successful extensions: 820915
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 12279
Number of HSP's that attempted gapping in prelim test: 756893
Number of HSP's gapped (non-prelim): 53566
length of query: 480
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 334
effective length of database: 8,933,572,693
effective search space: 2983813279462
effective search space used: 2983813279462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)