Query 011675
Match_columns 480
No_of_seqs 281 out of 888
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 03:59:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011675.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011675hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02982 galactinol-raffinose 100.0 5E-134 1E-138 1085.9 41.0 448 25-479 21-555 (865)
2 PLN02711 Probable galactinol-- 100.0 3E-133 6E-138 1082.5 42.4 469 1-479 1-471 (777)
3 PLN02219 probable galactinol-- 100.0 6E-129 1E-133 1048.7 40.7 438 26-479 5-451 (775)
4 PLN02684 Probable galactinol-- 100.0 1E-128 2E-133 1045.8 38.7 434 26-479 5-450 (750)
5 PLN02355 probable galactinol-- 100.0 7E-128 1E-132 1042.6 40.0 441 26-479 5-459 (758)
6 PF05691 Raffinose_syn: Raffin 100.0 2E-126 4E-131 1037.3 37.8 447 28-479 1-454 (747)
7 PF02065 Melibiase: Melibiase; 99.9 4.4E-25 9.6E-30 231.0 19.7 224 177-462 5-240 (394)
8 COG3345 GalA Alpha-galactosida 99.9 3.3E-22 7.2E-27 210.7 14.2 261 135-463 209-491 (687)
9 PLN03231 putative alpha-galact 99.9 1.7E-21 3.6E-26 200.8 18.3 220 219-479 2-241 (357)
10 PLN02229 alpha-galactosidase 99.9 1.5E-21 3.3E-26 204.7 14.7 169 219-479 64-239 (427)
11 PLN02692 alpha-galactosidase 99.9 2.1E-21 4.6E-26 202.8 15.1 170 219-479 57-233 (412)
12 PLN02808 alpha-galactosidase 99.8 6.9E-21 1.5E-25 198.2 14.4 170 219-479 33-209 (386)
13 PLN02899 alpha-galactosidase 99.8 3.5E-20 7.5E-25 199.7 17.1 219 219-479 32-272 (633)
14 cd06592 GH31_glucosidase_KIAA1 99.6 1.7E-14 3.7E-19 146.6 12.9 152 215-417 10-166 (303)
15 KOG2366 Alpha-D-galactosidase 99.4 1.3E-12 2.8E-17 133.8 8.7 169 219-479 34-226 (414)
16 cd06593 GH31_xylosidase_YicI Y 99.2 2.9E-10 6.4E-15 115.6 14.3 152 213-417 6-160 (308)
17 PRK10658 putative alpha-glucos 99.1 8.3E-09 1.8E-13 115.4 21.3 177 179-417 238-419 (665)
18 PRK10426 alpha-glucosidase; Pr 99.0 3.9E-07 8.5E-12 101.7 29.5 213 135-418 147-365 (635)
19 cd06599 GH31_glycosidase_Aec37 99.0 3.9E-09 8.5E-14 108.2 12.7 154 213-416 6-168 (317)
20 cd06591 GH31_xylosidase_XylS X 98.9 1.1E-08 2.4E-13 104.9 13.5 151 213-416 6-159 (319)
21 cd06598 GH31_transferase_CtsZ 98.9 1.7E-08 3.7E-13 103.4 14.4 155 212-416 5-164 (317)
22 cd06595 GH31_xylosidase_XylS-l 98.9 1.5E-08 3.2E-13 102.8 11.6 150 213-416 7-159 (292)
23 PF01055 Glyco_hydro_31: Glyco 98.8 6.4E-08 1.4E-12 102.9 16.1 173 180-417 1-181 (441)
24 cd06594 GH31_glucosidase_YihQ 98.8 7.5E-08 1.6E-12 98.9 15.5 158 212-417 5-167 (317)
25 cd06597 GH31_transferase_CtsY 98.8 1.1E-07 2.4E-12 98.5 16.7 165 212-417 5-188 (340)
26 cd06602 GH31_MGAM_SI_GAA This 98.8 6.7E-08 1.4E-12 100.1 14.0 148 213-416 6-165 (339)
27 cd06604 GH31_glucosidase_II_Ma 98.7 7E-08 1.5E-12 99.7 10.3 151 212-416 5-159 (339)
28 cd06600 GH31_MGAM-like This fa 98.7 1.1E-07 2.3E-12 97.7 10.9 148 213-416 6-160 (317)
29 cd06589 GH31 The enzymes of gl 98.6 3.6E-07 7.8E-12 91.3 13.4 104 224-417 13-117 (265)
30 cd06601 GH31_lyase_GLase GLase 98.4 1.9E-06 4.2E-11 89.1 12.4 127 213-416 6-133 (332)
31 cd06603 GH31_GANC_GANAB_alpha 98.4 6.7E-07 1.5E-11 92.5 8.9 148 213-416 6-162 (339)
32 COG1501 Alpha-glucosidases, fa 98.4 2E-05 4.2E-10 89.8 19.2 201 177-442 234-452 (772)
33 PLN02763 hydrolase, hydrolyzin 98.3 3.2E-05 6.9E-10 89.5 20.4 202 135-416 126-336 (978)
34 PF10566 Glyco_hydro_97: Glyco 98.1 3.4E-05 7.3E-10 77.9 12.8 126 225-443 22-147 (273)
35 KOG1065 Maltase glucoamylase a 97.7 0.0013 2.8E-08 74.4 17.3 173 177-417 266-449 (805)
36 TIGR01515 branching_enzym alph 92.2 5.2 0.00011 45.1 16.6 141 232-415 153-297 (613)
37 PRK12568 glycogen branching en 87.8 16 0.00036 42.1 15.9 73 383-455 378-461 (730)
38 PF13200 DUF4015: Putative gly 86.7 6.9 0.00015 40.7 11.2 155 233-446 11-186 (316)
39 COG0296 GlgB 1,4-alpha-glucan 80.0 13 0.00027 42.3 10.5 97 310-421 212-311 (628)
40 PF00724 Oxidored_FMN: NADH:fl 79.9 47 0.001 34.5 14.2 169 232-448 33-218 (341)
41 cd06596 GH31_CPE1046 CPE1046 i 78.4 7.6 0.00016 39.4 7.4 32 232-263 42-73 (261)
42 PRK12313 glycogen branching en 77.8 67 0.0015 36.4 15.6 33 383-415 279-311 (633)
43 cd04734 OYE_like_3_FMN Old yel 77.6 59 0.0013 34.0 14.1 28 312-342 77-104 (343)
44 cd02932 OYE_YqiM_FMN Old yello 74.7 38 0.00083 35.0 11.8 28 312-342 77-104 (336)
45 cd06544 GH18_narbonin Narbonin 73.6 21 0.00045 35.8 9.2 27 390-416 97-123 (253)
46 PRK14705 glycogen branching en 72.7 23 0.0005 43.3 10.7 128 312-455 815-957 (1224)
47 PF02638 DUF187: Glycosyl hydr 72.5 50 0.0011 34.1 11.9 23 233-257 17-39 (311)
48 PRK10933 trehalose-6-phosphate 70.1 53 0.0012 36.7 12.3 35 383-418 171-205 (551)
49 PLN00196 alpha-amylase; Provis 66.9 1.3E+02 0.0029 32.5 14.1 35 214-250 25-59 (428)
50 cd02930 DCR_FMN 2,4-dienoyl-Co 66.8 54 0.0012 34.3 10.9 28 312-342 77-104 (353)
51 PRK14706 glycogen branching en 64.9 57 0.0012 37.2 11.3 72 383-454 276-356 (639)
52 cd02879 GH18_plant_chitinase_c 63.7 45 0.00098 34.0 9.4 31 386-416 88-118 (299)
53 PLN02447 1,4-alpha-glucan-bran 62.6 66 0.0014 37.5 11.3 68 383-450 360-440 (758)
54 PRK13523 NADPH dehydrogenase N 62.4 1.8E+02 0.0039 30.4 13.7 107 313-443 82-206 (337)
55 PRK05402 glycogen branching en 61.7 3E+02 0.0064 31.9 16.5 36 383-418 374-410 (726)
56 TIGR02402 trehalose_TreZ malto 60.8 2.5E+02 0.0053 31.4 15.2 35 383-417 211-248 (542)
57 PLN02784 alpha-amylase 59.9 2.2E+02 0.0048 33.8 14.9 80 215-329 504-583 (894)
58 PLN02361 alpha-amylase 56.7 2.8E+02 0.0061 29.8 14.5 81 213-329 11-91 (401)
59 PRK14582 pgaB outer membrane N 56.2 2E+02 0.0044 33.2 13.6 92 312-420 380-472 (671)
60 KOG1066 Glucosidase II catalyt 55.3 41 0.00088 38.8 7.7 97 176-324 326-424 (915)
61 cd04747 OYE_like_5_FMN Old yel 53.5 1.5E+02 0.0032 31.4 11.4 59 389-447 137-212 (361)
62 cd02871 GH18_chitinase_D-like 52.9 68 0.0015 32.9 8.6 65 387-458 91-155 (312)
63 PLN02960 alpha-amylase 52.6 98 0.0021 36.7 10.5 68 383-450 526-605 (897)
64 cd02803 OYE_like_FMN_family Ol 51.3 45 0.00097 34.0 7.0 28 389-416 134-164 (327)
65 COG1649 Uncharacterized protei 50.0 3E+02 0.0065 30.0 13.0 148 226-417 54-210 (418)
66 cd02929 TMADH_HD_FMN Trimethyl 49.2 2E+02 0.0044 30.4 11.6 55 389-443 143-214 (370)
67 cd02931 ER_like_FMN Enoate red 46.3 2.5E+02 0.0055 29.8 11.9 61 388-448 142-220 (382)
68 cd00598 GH18_chitinase-like Th 45.9 60 0.0013 30.4 6.5 31 386-416 84-114 (210)
69 PLN02803 beta-amylase 44.7 2.2E+02 0.0047 31.9 11.1 31 233-265 105-135 (548)
70 cd02875 GH18_chitobiase Chitob 44.4 37 0.00081 35.6 5.2 33 385-417 91-123 (358)
71 cd04733 OYE_like_2_FMN Old yel 43.0 2.1E+02 0.0046 29.6 10.5 27 312-341 82-108 (338)
72 cd02933 OYE_like_FMN Old yello 39.9 3.9E+02 0.0085 27.9 11.9 56 388-443 144-216 (338)
73 cd06545 GH18_3CO4_chitinase Th 39.4 49 0.0011 32.6 5.0 32 386-417 79-110 (253)
74 PLN00197 beta-amylase; Provisi 39.2 3.1E+02 0.0068 30.9 11.3 32 232-265 124-155 (573)
75 TIGR02104 pulA_typeI pullulana 38.6 3.2E+02 0.0068 30.9 11.7 33 384-416 290-322 (605)
76 PLN02411 12-oxophytodienoate r 38.3 3.9E+02 0.0085 28.5 11.8 56 388-443 157-229 (391)
77 cd06542 GH18_EndoS-like Endo-b 37.9 93 0.002 30.5 6.7 72 387-462 85-156 (255)
78 PLN03244 alpha-amylase; Provis 37.6 2.6E+02 0.0056 33.1 10.7 123 309-449 438-579 (872)
79 cd06548 GH18_chitinase The GH1 36.8 92 0.002 31.9 6.6 31 386-416 105-135 (322)
80 cd02874 GH18_CFLE_spore_hydrol 36.4 85 0.0018 31.9 6.3 31 386-416 83-113 (313)
81 PF13200 DUF4015: Putative gly 36.2 92 0.002 32.5 6.5 63 185-250 242-305 (316)
82 cd02872 GH18_chitolectin_chito 35.6 89 0.0019 32.4 6.4 31 386-416 92-122 (362)
83 PF00704 Glyco_hydro_18: Glyco 34.6 1.2E+02 0.0025 30.7 6.9 31 387-417 96-126 (343)
84 TIGR02403 trehalose_treC alpha 33.4 6.4E+02 0.014 28.1 12.9 35 383-418 164-198 (543)
85 cd04735 OYE_like_4_FMN Old yel 32.9 3.5E+02 0.0076 28.3 10.3 27 312-341 78-104 (353)
86 PLN02705 beta-amylase 32.1 5E+02 0.011 29.8 11.5 33 231-265 264-296 (681)
87 PLN02877 alpha-amylase/limit d 30.9 4.4E+02 0.0096 31.8 11.5 32 387-418 533-564 (970)
88 PRK10605 N-ethylmaleimide redu 29.3 5.2E+02 0.011 27.2 10.9 56 388-443 151-223 (362)
89 cd02876 GH18_SI-CLP Stabilin-1 28.5 1.3E+02 0.0029 30.7 6.2 29 386-414 88-116 (318)
90 TIGR02103 pullul_strch alpha-1 28.1 5.4E+02 0.012 30.8 11.7 32 384-415 467-498 (898)
91 PLN02801 beta-amylase 28.1 7.2E+02 0.016 27.8 11.8 32 232-265 34-65 (517)
92 cd06549 GH18_trifunctional GH1 28.0 1.4E+02 0.003 30.4 6.2 32 385-416 83-114 (298)
93 COG1472 BglX Beta-glucosidase- 27.9 90 0.002 33.5 5.0 66 386-451 93-172 (397)
94 PRK09993 C-lysozyme inhibitor; 27.7 32 0.0007 32.1 1.3 38 6-44 99-136 (153)
95 COG1902 NemA NADH:flavin oxido 27.4 5.5E+02 0.012 27.3 10.7 60 389-448 142-218 (363)
96 COG2894 MinD Septum formation 26.9 71 0.0015 32.2 3.6 27 229-257 94-120 (272)
97 cd06546 GH18_CTS3_chitinase GH 26.7 1.5E+02 0.0033 29.6 6.1 30 387-416 93-122 (256)
98 PLN02905 beta-amylase 25.3 7.3E+02 0.016 28.6 11.4 32 232-265 283-314 (702)
99 cd02873 GH18_IDGF The IDGF's ( 24.3 1.8E+02 0.004 31.1 6.5 31 386-416 101-131 (413)
100 cd02878 GH18_zymocin_alpha Zym 23.9 2.6E+02 0.0056 29.1 7.4 30 387-416 88-117 (345)
101 PF01136 Peptidase_U32: Peptid 23.7 95 0.0021 30.0 3.9 51 384-442 149-199 (233)
102 smart00636 Glyco_18 Glycosyl h 23.6 2.2E+02 0.0047 29.0 6.7 32 386-417 87-118 (334)
103 KOG2806 Chitinase [Carbohydrat 22.7 1.7E+02 0.0036 31.8 5.8 61 385-446 142-202 (432)
104 TIGR01370 cysRS possible cyste 22.2 2.9E+02 0.0062 28.9 7.2 73 384-459 139-214 (315)
105 TIGR02630 xylose_isom_A xylose 22.0 3.3E+02 0.0071 29.8 7.7 18 331-350 43-60 (434)
106 PRK05474 xylose isomerase; Pro 21.0 3.2E+02 0.007 29.9 7.4 54 331-412 44-98 (437)
107 cd08560 GDPD_EcGlpQ_like_1 Gly 20.7 1.7E+02 0.0036 31.1 5.2 25 391-415 323-347 (356)
No 1
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=5.1e-134 Score=1085.90 Aligned_cols=448 Identities=51% Similarity=0.933 Sum_probs=418.3
Q ss_pred eeeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccc-----------cccceeecccCCCCCccceeecccccCc
Q 011675 25 NIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVF-----------SNVGSFIGFDSFEPKSRHVVPIGKLKNI 93 (480)
Q Consensus 25 ~~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~-----------~~~g~~~g~~~~~~~~~~~~~lG~~~~~ 93 (480)
--.|+|+||+|+|+|+++|++||+||++||+++.+. ++++ ++.|+||||++++|+|||+++||+++++
T Consensus 21 ~~~~~l~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~-~~~~p~~~~~~~~~~~~~g~FlG~~~~~~~srhv~~lG~l~~~ 99 (865)
T PLN02982 21 PNYFDLSDGKLSVKGVPLLSDVPNNVTFTPFSSISI-SSDAPLPLLQRVQSNSHKGGFLGFTKESPSDRLTNSLGKFEGR 99 (865)
T ss_pred CceeEecCCeEEECCEEeecCCCCceEecCcccccc-cccCccccccccccccccceEEeeecCCCccceeeecccccCc
Confidence 348999999999999999999999999999888752 1222 2679999999999999999999999999
Q ss_pred ceEEEEEecccccccccCCCCCCCCcCceEEEEEcCCCCCccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeecc
Q 011675 94 RFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGD 173 (480)
Q Consensus 94 r~~al~R~k~wW~~pr~G~~~~~ip~etq~ll~~~~~~~~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~ 173 (480)
|||||||||+||||||+|++++|||.||||||+|.++ ...|+|+|||++|+||++||++.+++++||+|||+++|+++
T Consensus 100 rFms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~--~~~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ESg~~~V~~s 177 (865)
T PLN02982 100 DFLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPE--IDSYVLIIPLIEGSFRSALHPGEDGHVMICAESGSTKVKAS 177 (865)
T ss_pred eEEeeeehhhhccchhhcCCCCCCChhheEEEEEcCC--CceEEEEEEecCCceEEEecCCCCCCEEEEEecCCcccccc
Confidence 9999999999999999999999999999999999996 45799999999999999999999999999999999999999
Q ss_pred ccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcE
Q 011675 174 SFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGL 253 (480)
Q Consensus 174 ~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~ 253 (480)
++..++|||+|+|||++|++|++++|+|++||+++|+|++|.++|+||||||||||++||+++|++++++|+++|+||+|
T Consensus 178 ~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprf 257 (865)
T PLN02982 178 SFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRF 257 (865)
T ss_pred ccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCC--C----------------------------
Q 011675 254 VLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVS--P---------------------------- 303 (480)
Q Consensus 254 lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~--~---------------------------- 303 (480)
||||||||++.+|.++|.++.++++.+|+||++||.+|+||+||+++++ +
T Consensus 258 vIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~ 337 (865)
T PLN02982 258 LIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEK 337 (865)
T ss_pred EEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcccchhhhhh
Confidence 9999999999987655545556889999999999999999999997432 0
Q ss_pred ---------------------------C-----------------CCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccC
Q 011675 304 ---------------------------N-----------------GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCG 339 (480)
Q Consensus 304 ---------------------------~-----------------~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~G 339 (480)
| |++++.+.|||++|++||++|++||||||||||+|
T Consensus 338 ~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~G 417 (865)
T PLN02982 338 ARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCG 417 (865)
T ss_pred cccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccC
Confidence 0 01245567999999999999977999999999999
Q ss_pred CCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675 340 YWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418 (480)
Q Consensus 340 YWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l 418 (480)
|||||+|++ ++ ++++++|+.+||+.++|||+|+|++..+|+++++|++++.|||+||+||+++||||||||+|++|
T Consensus 418 YWGGV~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~L 494 (865)
T PLN02982 418 AWGGVRPGT---THLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTL 494 (865)
T ss_pred cccCcCCCC---CCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhH
Confidence 999999996 45 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccc-cccceeeeccCCCC
Q 011675 419 EILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLL-GTEAIALGRVGMTS 479 (480)
Q Consensus 419 ~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~-~~~s~~~~R~SDDF 479 (480)
++|++++|||++|+++||+||++|+++||++|++|+||||+|+++|+ ++++++. |+||||
T Consensus 495 e~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~-R~SDDF 555 (865)
T PLN02982 495 EYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMG-RVGDDF 555 (865)
T ss_pred HHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceee-eccccc
Confidence 99999999999999999999999999999999999999999999995 5677777 999999
No 2
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=2.8e-133 Score=1082.53 Aligned_cols=469 Identities=79% Similarity=1.320 Sum_probs=434.0
Q ss_pred CCCchhhhcccceeeecCCCCCcceeeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccccccceeecccCCCCC
Q 011675 1 MAPSISKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPK 80 (480)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 80 (480)
||||.||-.+|.--++|+ +..+.|+|+||+|+|+|+++|++||+||++||++.......-....|+||||++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~v~g~~~l~~vp~nv~~tp~~~~~~~~~~~~~~g~flG~~~~~~~ 76 (777)
T PLN02711 1 MAPSLSKSNSGAMGLVDG----LNPSLITLEGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPITVGAGSFVGFDAGEPK 76 (777)
T ss_pred CCCcccCCCCcccccccc----cccceEEEeCCeEEECCEEeecCCCCceEecCCCCcccccccccccceEEeeecCCCC
Confidence 899999999999888885 5667999999999999999999999999999977642111111225999999999999
Q ss_pred ccceeecccccCcceEEEEEecccccccccCCCCCCCCcCceEEEEEcCCCCCccEEEEeEeecCCeEEEeccCCCCcEE
Q 011675 81 SRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDLENETQLVILDNSTDTGRPYVLLLPIVEGPFRASLQPGADDYVD 160 (480)
Q Consensus 81 ~~~~~~lG~~~~~r~~al~R~k~wW~~pr~G~~~~~ip~etq~ll~~~~~~~~g~y~v~Lpl~~g~fra~L~~~~~~~l~ 160 (480)
|||+++||+++++|||||||||+||||||+|++++|||+||||||+|.+++ ...|+|+|||++|+||++||++.+++++
T Consensus 77 srhv~~~G~l~~~rfm~~fRfK~WWmt~~~G~~g~dip~eTQ~ll~e~~~~-~~~y~~~lP~~eg~fRa~Lq~~~~d~~~ 155 (777)
T PLN02711 77 SRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDVENETQMMILDKSDS-GRPYVLLLPLIEGPFRASLQPGEDDNVD 155 (777)
T ss_pred cceeeecccccCcEeeeeehhhhhccchhhcCCCCCCChhheEEEEEccCC-CceEEEEEeecCCceEEEecCCCCCcEE
Confidence 999999999999999999999999999999999999999999999999852 4679999999999999999999999999
Q ss_pred EEEeeCCceeeccccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHH
Q 011675 161 VCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEG 240 (480)
Q Consensus 161 l~~esg~~~v~~~~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~ 240 (480)
||+|||+++|+++++..+||||+|+|||++|++|+++|++|++||++|++|++|.++|+||||||||||++|||++|+++
T Consensus 156 ic~esg~~~v~~~~~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~g 235 (777)
T PLN02711 156 ICVESGSTKVCGSEFRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEG 235 (777)
T ss_pred EEEecCCcceeccccceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCcEEEEcCCcCcccCCCCCC-CcccccccccCCcCCccccCcccCCCCCCCCCCCCCCCCCCCcHHHHHH
Q 011675 241 VKGLVDGGCPPGLVLIDDGWQSISHDEDPI-DSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIR 319 (480)
Q Consensus 241 l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p-~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~~~~~GLk~~V~ 319 (480)
|++|+++|+||+|||||||||++.++++++ +++..+.+.+|+||.+||++|++|+|||++.+ .++.++.|||++|+
T Consensus 236 l~~L~~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~---~~~~~p~Glk~~v~ 312 (777)
T PLN02711 236 VKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVS---PKSLSNKGMGAFIR 312 (777)
T ss_pred HHHHHhCCCCccEEEEcCCcccccccCcccccccccccccccchhhhhhcccccccccccccc---ccCCCCCcHHHHHH
Confidence 999999999999999999999998764422 12335678899999999999999999997421 13468889999999
Q ss_pred HHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHH
Q 011675 320 DLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLH 399 (480)
Q Consensus 320 ~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~ 399 (480)
+||++|++||||||||||+||||||+|++++|+ ++++++|+++||+.+++||+++|++..+|+++++|++++.|||+||
T Consensus 313 ~iK~~~~~vk~VyVWHAL~GYWGGv~P~~~~~~-~~~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~Pe~~~~FY~~~h 391 (777)
T PLN02711 313 DLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLP-ESKVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLH 391 (777)
T ss_pred HHHhhCCCCCEEEEeeeccCcccCcCCCCCCCc-cceeeccccCcccccccccccccccccCcccccCHHHHHHHHHHHH
Confidence 999999779999999999999999999998877 6789999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCccccc-ccceeeeccCCC
Q 011675 400 SHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLG-TEAIALGRVGMT 478 (480)
Q Consensus 400 ~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~~-~~s~~~~R~SDD 478 (480)
+||+++||||||||+|++|++|++++|||++++++||+||++|++|||++|++|+||||+++++|++ ++++++ |+|||
T Consensus 392 s~Las~GVDgVKVDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~-R~SDD 470 (777)
T PLN02711 392 SHLQSVGIDGVKVDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLG-RVGDD 470 (777)
T ss_pred HHHHHcCCCeEEEchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCccccee-eeccc
Confidence 9999999999999999999999989999999999999999999999999999999999999999965 677777 99999
Q ss_pred C
Q 011675 479 S 479 (480)
Q Consensus 479 F 479 (480)
|
T Consensus 471 F 471 (777)
T PLN02711 471 F 471 (777)
T ss_pred c
Confidence 9
No 3
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=5.8e-129 Score=1048.73 Aligned_cols=438 Identities=38% Similarity=0.735 Sum_probs=416.4
Q ss_pred eeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccccccceeecccCCCCCccceeecccccCcceEEEEEecccc
Q 011675 26 IDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWW 105 (480)
Q Consensus 26 ~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~lG~~~~~r~~al~R~k~wW 105 (480)
..|+|+||+|+|+|+++|++||+||++||++.. ..+.|+||||++++|+|||+++||+++++|||||||||+||
T Consensus 5 ~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~------~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WW 78 (775)
T PLN02219 5 PKISINNGNLVVQGKTILTGVPDNIVLTPGSGN------GFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWW 78 (775)
T ss_pred ceeEEcCCeEEECCEEeeccCCCceEecCCCCC------CCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhc
Confidence 479999999999999999999999999997754 34689999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCceEEEEEcCCC----C----CccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeeccccce
Q 011675 106 TTHWVGSNGRDLENETQLVILDNSTD----T----GRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRS 177 (480)
Q Consensus 106 ~~pr~G~~~~~ip~etq~ll~~~~~~----~----~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~~~~~ 177 (480)
||||||++++|||.||||||+|.++. + ...|+|+|||++|+|||+||++++++++||+|||++.|+++++..
T Consensus 79 mt~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~ 158 (775)
T PLN02219 79 MTQRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLH 158 (775)
T ss_pred cchhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccce
Confidence 99999999999999999999999852 0 124999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEc
Q 011675 178 VVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLID 257 (480)
Q Consensus 178 ~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIID 257 (480)
+|||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|+++|++|+++|+||+|||||
T Consensus 159 ~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viID 238 (775)
T PLN02219 159 LVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIID 238 (775)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeec
Q 011675 258 DGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (480)
Q Consensus 258 DGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl 337 (480)
||||++.++++ +..+.+.+|+||++||++|++|+||++.. ...+++.|||++|++||++|+ ||||||||||
T Consensus 239 DGwQsi~~~~~----~~~~~~~~g~qf~~rL~~f~en~KF~~~~----~~~~fp~Glk~~V~~iK~~~~-vk~V~VWHAL 309 (775)
T PLN02219 239 DGWQQIENKEK----DENCVVQEGAQFATRLTGIKENAKFQKND----QKNEQVSGLKHVVDDAKQRHN-VKQVYVWHAL 309 (775)
T ss_pred cCccccccccc----cccccccccchhhhhhccccccccccccc----cccCCCCcHHHHHHHHHhccC-CcEEEEeeec
Confidence 99999988644 22467889999999999999999999521 123678999999999999998 9999999999
Q ss_pred cCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 338 CGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 338 ~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+||||||+|++++|++ ++++.||+.+||+.+++||++++++..+|+++++|+++++|||+||+||+++||||||||+|+
T Consensus 310 ~GYWGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~ 389 (775)
T PLN02219 310 AGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQN 389 (775)
T ss_pred cceecCcCCCCcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhh
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccccccceeeeccCCCC
Q 011675 417 LLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTS 479 (480)
Q Consensus 417 ~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~~~~s~~~~R~SDDF 479 (480)
+|++|+.++++|++++++||+||++|++|||++|++|+||||+++++|+.++++++ ||||||
T Consensus 390 ~Le~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~-R~SDDF 451 (775)
T PLN02219 390 IIETLGAGHGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVV-RASDDF 451 (775)
T ss_pred hHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhccccccee-eccccc
Confidence 99999999999999999999999999999999999999999999999999999999 999999
No 4
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.1e-128 Score=1045.79 Aligned_cols=434 Identities=39% Similarity=0.718 Sum_probs=410.5
Q ss_pred eeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccccccceeecccCCCCCccceeecccccCcceEEEEEecccc
Q 011675 26 IDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWW 105 (480)
Q Consensus 26 ~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~lG~~~~~r~~al~R~k~wW 105 (480)
..|+|+||+|+|+|+++|++||+||++||++.. +.+.|+||||++++|+|||+++||+++++|||||||||+||
T Consensus 5 ~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~------~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WW 78 (750)
T PLN02684 5 PAVRISDGKLIVKNRTILTGVPDNVIATSGSES------GPVEGVFVGAVFDKENSKHVVSLGTLRDVRFMACFRFKLWW 78 (750)
T ss_pred ceeEEcCCeEEECCEEeeccCCCceEecCCCCC------CcCcceEEeeecCCcccceeeecccccCcEeehhhhhhhhh
Confidence 479999999999999999999999999997754 34689999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCceEEEEEcCCC-----C------CccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeeccc
Q 011675 106 TTHWVGSNGRDLENETQLVILDNSTD-----T------GRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDS 174 (480)
Q Consensus 106 ~~pr~G~~~~~ip~etq~ll~~~~~~-----~------~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~~ 174 (480)
||||||++++|||+||||||+|.+++ + ...|+|+|||++|+|||+||++.+++++||+|||+++|++++
T Consensus 79 mt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~Y~v~lPi~eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s~ 158 (750)
T PLN02684 79 MAQKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVYTVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRSS 158 (750)
T ss_pred cchhhcCCCCCCCchhEEEEEEcCCCcccccccccccCCcceEEEEEecCCceEEEecCCCCCcEEEEEecCCccccccc
Confidence 99999999999999999999999853 1 115999999999999999999999999999999999999999
Q ss_pred cceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEE
Q 011675 175 FRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLV 254 (480)
Q Consensus 175 ~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~l 254 (480)
+..+||||+|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+||+||
T Consensus 159 ~~~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~v 238 (750)
T PLN02684 159 FTHSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFV 238 (750)
T ss_pred cceeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEe
Q 011675 255 LIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVW 334 (480)
Q Consensus 255 IIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vW 334 (480)
|||||||++.+++++ .+ +. ..++||.+||++|++|+|||+. ..++.|||++|++||++|+ |||||||
T Consensus 239 IIDDGwQs~~~d~~~--~~--~~-~~~~q~~~rL~~f~en~KF~~~-------~~p~~Glk~~V~~iK~~~~-vk~V~VW 305 (750)
T PLN02684 239 IIDDGWQSVGGDPTV--EA--GD-EKKEQPLLRLTGIKENEKFKKK-------DDPNVGIKNIVNIAKEKHG-LKYVYVW 305 (750)
T ss_pred EEecccccccccccc--cc--cc-cccchhhhhhccCccccccccc-------cCCCccHHHHHHHHHhhcC-CcEEEEE
Confidence 999999999886541 11 22 3458999999999999999952 2344799999999999998 9999999
Q ss_pred eeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEc
Q 011675 335 HALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVD 413 (480)
Q Consensus 335 HAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD 413 (480)
|||+||||||+|++++|++ ++++.||+.+||+..++|+++++++.++|+++++|+++++|||+||+||+++||||||||
T Consensus 306 HAL~GYWGGv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD 385 (750)
T PLN02684 306 HAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVD 385 (750)
T ss_pred eeecccccccCCCCcchhhccccccccccCccccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEC
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccccccceeeeccCCCC
Q 011675 414 VIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTS 479 (480)
Q Consensus 414 ~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~~~~s~~~~R~SDDF 479 (480)
+|++|++|+.++++|++++++||+||++|++|||++|++|+||||++++||++++++++ |+||||
T Consensus 386 ~Q~~le~l~~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~sk~sav~-R~SDDF 450 (750)
T PLN02684 386 VQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAVV-RASDDF 450 (750)
T ss_pred hhhhHHHhhcccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhccccccee-eecccc
Confidence 99999999989999999999999999999999999999999999999999999999999 999999
No 5
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=6.5e-128 Score=1042.55 Aligned_cols=441 Identities=39% Similarity=0.710 Sum_probs=414.7
Q ss_pred eeeEeeCCeEEEcCeecccCCCCceEEccCCCcccccccccccceeecccCCCCCccceeecccccCcceEEEEEecccc
Q 011675 26 IDITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKSVFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWW 105 (480)
Q Consensus 26 ~~~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~lG~~~~~r~~al~R~k~wW 105 (480)
..|+|+||+|+|+|+++|++||+||++||++.. ..+.|+||||++++|+|||+++||+++++|||||||||+||
T Consensus 5 ~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~------~~~~g~f~g~~~~~~~srhv~~~G~l~~~rf~~~frfK~WW 78 (758)
T PLN02355 5 AGISVADGNLVVLGNRVLHDVHDNVLVTPASGG------ALINGAFIGVRSDQVGSRRVFPVGKLEDLRFMCVFRFKLWW 78 (758)
T ss_pred ceeEEeCCeEEECCEEeeccCCCceEecCCCCC------CcCcceEEeeecCCCccceeeecccccCcEeeeeehhhhhh
Confidence 479999999999999999999999999997754 34689999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCceEEEEEcCCC----------C--CccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeecc
Q 011675 106 TTHWVGSNGRDLENETQLVILDNSTD----------T--GRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGD 173 (480)
Q Consensus 106 ~~pr~G~~~~~ip~etq~ll~~~~~~----------~--~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~ 173 (480)
||||+|++++|||+||||||+|.+++ + ...|+|+|||++|+|||+||++++++++||+|||++.|+++
T Consensus 79 mt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~~Y~v~lPi~~g~fra~Lqg~~~~~l~ic~eSG~~~v~~~ 158 (758)
T PLN02355 79 MTQRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSVYTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDEF 158 (758)
T ss_pred ccccccCCCcCCChhheEEEEEcCCcccccccccccCCCCceeEEEEeecCCceEEEEecCCCCcEEEEEEcCCCccccc
Confidence 99999999999999999999999852 0 12499999999999999999999999999999999999999
Q ss_pred ccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcE
Q 011675 174 SFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGL 253 (480)
Q Consensus 174 ~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~ 253 (480)
++..+||+++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|+++|++|+++|+|++|
T Consensus 159 ~~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~ 238 (758)
T PLN02355 159 EGSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKF 238 (758)
T ss_pred cCceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCC-CCCCCCCcHHHHHHHHHhhcCCccEEE
Q 011675 254 VLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNG-GDSSDNKGMGAFIRDLKDEFKTVDQVY 332 (480)
Q Consensus 254 lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~-~~~~~~~GLk~~V~~ik~~~g~lk~V~ 332 (480)
||||||||++.+|.+ +..+.+++|+||++||.+|++|+|||+... .+ ..+.++.|||++|++||++|+ |||||
T Consensus 239 viIDDGwQs~~~d~~----~~~~~~~~~~q~~~rL~~f~~n~KF~~~~~-~~~~~~~~~~Glk~~V~~iK~~~~-vk~V~ 312 (758)
T PLN02355 239 VIIDDGWQSVGMDPT----GIECLADNSANFANRLTHIKENHKFQKNGK-EGHRVDDPALGLGHIVTEIKEKHS-LKYVY 312 (758)
T ss_pred EEEeccccccccccc----cccccccccchhhhhhcccccccccccccc-ccccccCCCCcHHHHHHHHHhhcC-CcEEE
Confidence 999999999976543 223677889999999999999999995210 00 013446899999999999998 99999
Q ss_pred EeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Q 011675 333 VWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVK 411 (480)
Q Consensus 333 vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVK 411 (480)
|||||+||||||+|++++|++ +++++||+.|||+.+++|+++++++..+|+++++|++++.|||+||+||+++||||||
T Consensus 313 VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVK 392 (758)
T PLN02355 313 VWHAITGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVK 392 (758)
T ss_pred EeeeecceecCcCCCCcccccccccccccccCCcccccCcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccccccceeeeccCCCC
Q 011675 412 VDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLLGTEAIALGRVGMTS 479 (480)
Q Consensus 412 vD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~~~~s~~~~R~SDDF 479 (480)
||+|+++++|+.++++|++++++||+||++|++|||++|++|+||||+|+++|++++++++ |+||||
T Consensus 393 VD~Q~~le~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~~k~sav~-R~SDDF 459 (758)
T PLN02355 393 VDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCMSHNTDGLYSAKRTAVI-RASDDF 459 (758)
T ss_pred EchhhhHHHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEecccCchhhcccccceee-eecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=1.7e-126 Score=1037.29 Aligned_cols=447 Identities=49% Similarity=0.910 Sum_probs=420.2
Q ss_pred eEeeCCeEEEcCeecccCCCCceEEccCCCcccccc--cccccceeecccCCCCCccceeecccccCcceEEEEEecccc
Q 011675 28 ITLEDSKLHANGHVFLSDVPDNVTLTPSTATATEKS--VFSNVGSFIGFDSFEPKSRHVVPIGKLKNIRFMSIFRFKVWW 105 (480)
Q Consensus 28 ~~~~~~~~~v~g~~~l~~~~~~v~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~~~~~~lG~~~~~r~~al~R~k~wW 105 (480)
|+|+||+|+|+|+++|++||+||++||.++..+..+ ..++.|+||||++.+|+|||+++||++++.|||||||||+||
T Consensus 1 ~~~~~~~l~v~g~~~l~~vp~nv~~~~~~~~~~~~~~~~~~~~g~f~g~~~~~~~sr~v~~lG~l~~~rfm~~fRfK~WW 80 (747)
T PF05691_consen 1 ISLSDGNLVVNGRPILTGVPDNVTLTPASGSDAPPPVFAGAVDGAFLGFTADEPSSRHVFSLGKLRGRRFMSLFRFKLWW 80 (747)
T ss_pred CEecCCeeEECCEEeecCCCcceEeccCccccccccccccCCCceEEcccCCCCCcceeEecccccCceeeehhhhhhhc
Confidence 689999999999999999999999999877621111 147789999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcCceEEEEEcCCC--CCccEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeeccccceEEEEEe
Q 011675 106 TTHWVGSNGRDLENETQLVILDNSTD--TGRPYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHL 183 (480)
Q Consensus 106 ~~pr~G~~~~~ip~etq~ll~~~~~~--~~g~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~~~~~~l~v~~ 183 (480)
|+||||++++|||+||||||+|.+++ +.+.|+|+|||++|+||++||++++++++||+|||++.|.++++..+|||++
T Consensus 81 m~p~~G~~g~dip~eTQ~ll~e~~~~~~~~~~Y~vlLPl~eg~FRa~Lqg~~~~~l~i~veSg~~~v~~s~~~~~l~v~~ 160 (747)
T PF05691_consen 81 MTPRMGTSGRDIPMETQFLLLESPDDSDEGAPYVVLLPLLEGSFRASLQGGEDDELEICVESGDPAVQTSSFDHALYVHA 160 (747)
T ss_pred cccccCCCcccCChhhheeeeecCcccCCccceEEEEEEecCceeeeeccCCCCcEEEEEecCCCccccccCceEEEEec
Confidence 99999999999999999999999942 2569999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcc
Q 011675 184 GDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSI 263 (480)
Q Consensus 184 g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~ 263 (480)
|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++||+++|+++|++|+++|+||+|||||||||++
T Consensus 161 g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDDGWQ~~ 240 (747)
T PF05691_consen 161 GDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDDGWQSV 240 (747)
T ss_pred cCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEecchhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCC-CCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCC
Q 011675 264 SHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNG-GDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWG 342 (480)
Q Consensus 264 ~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~-~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWg 342 (480)
.+++++|..+..+.+++|+||.+||.+|++|+||++.++ + .+++++.||+++|++||++|++||||||||||+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~--~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~GYWg 318 (747)
T PF05691_consen 241 DNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKS--GKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCGYWG 318 (747)
T ss_pred cccCcccccccccccccccccchhhhhhhhhhhhhhccC--CCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcceec
Confidence 998887777777889999999999999999999996431 0 1246889999999999999966999999999999999
Q ss_pred CCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhh
Q 011675 343 GLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEIL 421 (480)
Q Consensus 343 Gv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l 421 (480)
||+|++ +.+ ++++++|+.+||+..++||++++++..+|+++++|+++++|||+||+||+++||||||||+|++|++|
T Consensus 319 Gi~P~~--~~~~~~k~~~~~~spg~~~~~~d~~~d~~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l~~l 396 (747)
T PF05691_consen 319 GISPDG--MLAYNYKLVYPKLSPGLQGNMPDLAVDSIVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAILETL 396 (747)
T ss_pred CcCCCC--ccccccceeecccCCcccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhhhhh
Confidence 999975 556 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCcccc-cccceeeeccCCCC
Q 011675 422 CENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDFMLL-GTEAIALGRVGMTS 479 (480)
Q Consensus 422 ~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l~~-~~~s~~~~R~SDDF 479 (480)
+.++++|++++++||+||++|+++||++|++|+||||+|++||+ +++++++ |+||||
T Consensus 397 ~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh~~~~l~~~~~~~av~-R~SDDF 454 (747)
T PF05691_consen 397 GEGYGGRVELARAYQDALEASVARHFSGNGVINCMSHNPDNLYHSTKQSAVV-RNSDDF 454 (747)
T ss_pred hccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCccchhcccccccce-eccccc
Confidence 99999999999999999999999999999999999999999999 6788888 999999
No 7
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.93 E-value=4.4e-25 Score=230.95 Aligned_cols=224 Identities=19% Similarity=0.320 Sum_probs=149.6
Q ss_pred eEEEEEeCCCHHHHHHHHHH-HHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEE
Q 011675 177 SVVYVHLGDDPFKLVKDAMR-VVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVL 255 (480)
Q Consensus 177 ~~l~v~~g~dp~~~i~~A~~-~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lI 255 (480)
+.+++..+.+.+..|.+.++ .+++++..- ....+++| ++||||+++|+++|++.|++.++.+++.|++ +++
T Consensus 5 P~~~~~~s~~gl~~~s~~~h~~~r~~~~~~-~~~~~~~p-----v~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e--~fv 76 (394)
T PF02065_consen 5 PEAVASYSDQGLNGMSQRFHRFVRRHLLRP-PWRDKPPP-----VGWNSWEAYYFDITEEKILELADAAAELGYE--YFV 76 (394)
T ss_dssp --EEEEEESBHHHHHHHHHHHHHHHHTSTT-TTTTSS-------EEEESHHHHTTG--HHHHHHHHHHHHHHT-S--EEE
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHhcCCC-ccCCCCCc-----eEEEcccccCcCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 44566777788999999888 567775431 12234444 5799999999999999999999999999998 999
Q ss_pred EcCCcCcccCCCCCCCcccccccccCCcCCccccCcccC-CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEe
Q 011675 256 IDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVW 334 (480)
Q Consensus 256 IDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n-~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vW 334 (480)
||||||..+++.. ..+.+|..+ +||| +||++++++||++ | || +|+|
T Consensus 77 iDDGW~~~r~~d~-----------------~~~GdW~~~~~kFP-------------~Gl~~l~~~i~~~-G-mk-~GlW 123 (394)
T PF02065_consen 77 IDDGWFGGRDDDN-----------------AGLGDWEPDPKKFP-------------NGLKPLADYIHSL-G-MK-FGLW 123 (394)
T ss_dssp E-SSSBCTESTTT-----------------STTSBECBBTTTST-------------THHHHHHHHHHHT-T--E-EEEE
T ss_pred EcCccccccCCCc-----------------ccCCceeEChhhhC-------------CcHHHHHHHHHHC-C-Ce-EEEE
Confidence 9999999755422 346778854 8999 5999999999994 8 99 9999
Q ss_pred eeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccc---eec-----cCCCCCCHHHHHHHHHHHHHHHhhcC
Q 011675 335 HALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDK---IVN-----NGVGFVPPELVDQMYEGLHSHLEKVG 406 (480)
Q Consensus 335 HAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~---~~~-----~Gl~lv~P~~v~~fyd~l~~~La~~G 406 (480)
.++.- |.| +|++. ..+|||.... ... .-+++.+|+...++++.+.++|+++|
T Consensus 124 ~ePe~----v~~-------~S~l~---------~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~g 183 (394)
T PF02065_consen 124 FEPEM----VSP-------DSDLY---------REHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWG 183 (394)
T ss_dssp EETTE----EES-------SSCHC---------CSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT
T ss_pred ecccc----ccc-------hhHHH---------HhCccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHhcC
Confidence 54331 233 34432 2234443210 000 11689999998999999999999999
Q ss_pred CCEEEEcCcchhhhhhccCCC--hhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCc
Q 011675 407 IDGVKVDVIHLLEILCENYGG--RVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDF 462 (480)
Q Consensus 407 VDgVKvD~q~~l~~l~~~~gg--rv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~ 462 (480)
|||+|+|++..+...+....+ ..+.+.++|+-++ .+++.||+.-|.+|-|.+...
T Consensus 184 idYiK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~-~L~~~~P~v~iE~CssGG~R~ 240 (394)
T PF02065_consen 184 IDYIKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLD-RLRARFPDVLIENCSSGGGRF 240 (394)
T ss_dssp -SEEEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHH-HHHHHTTTSEEEE-BTTBTTT
T ss_pred CCEEEeccccCCCCCCCCCchHHHHHHHHHHHHHHH-HHHHhCCCcEEEeccCCCCcc
Confidence 999999998765433222111 2244455666554 789999999999999986443
No 8
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.3e-22 Score=210.70 Aligned_cols=261 Identities=20% Similarity=0.260 Sum_probs=183.7
Q ss_pred cEEEEeEeecCCeEEEeccCCCCcEEEEEe----eCC---ceeeccccceEEEEEeCCCHHHHHHHHHH-HHHHhhccCC
Q 011675 135 PYVLLLPIVEGPFRASLQPGADDYVDVCVE----SGS---TKVTGDSFRSVVYVHLGDDPFKLVKDAMR-VVRSHLGTFK 206 (480)
Q Consensus 135 ~y~v~Lpl~~g~fra~L~~~~~~~l~l~~e----sg~---~~v~~~~~~~~l~v~~g~dp~~~i~~A~~-~~~~~l~tf~ 206 (480)
.|.+-|.. .|+|++-.+-+..+...+..+ ++. +.-+..+...+|.+..+. ....|.++++ ++++++-. +
T Consensus 209 V~gf~l~~-Sgnf~~f~ev~q~~~~~Vq~g~l~~~~e~~l~~~e~f~tpe~lv~~edq-gl~~lsq~y~~~v~~~i~~-~ 285 (687)
T COG3345 209 VYGFGLTY-SGNFAAFVEVHQHPFFRVQDGILPFDGEWFLEEFESFVTPEVLVVLEDQ-GLNGLSQKYAELVRMEIVP-R 285 (687)
T ss_pred EEEEEEee-ccchhheeeeccCchhhhhhcccccCceEecccccccCCceEEEEEcCC-CcchHHHHHHHHHHhhcCc-c
Confidence 34444444 788888887766554332222 111 111112223333333333 3668888887 67776432 3
Q ss_pred CCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCc
Q 011675 207 LLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPC 286 (480)
Q Consensus 207 ~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~ 286 (480)
.+.+|++| .|||||+|+|.++|++.|++.++.+++.|++ +++||||||..++|+. .
T Consensus 286 ~~~~kprP-----i~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd~-----------------~ 341 (687)
T COG3345 286 PRVKKPRP-----IGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDDL-----------------K 341 (687)
T ss_pred cccCCCCc-----ceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcch-----------------h
Confidence 45677777 7899999999999999999999999999987 9999999999888743 3
Q ss_pred cccCcccC-CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCC
Q 011675 287 RLLRYQEN-FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSP 364 (480)
Q Consensus 287 rl~~~~~n-~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~sp 364 (480)
.|+||--| +||| .|+..+++.|++ .| ++ +|+| +.|+ |.+ +|.+
T Consensus 342 slGDWlv~seKfP-------------sgiE~li~~I~e-~G-l~-fGIW---------lePe---mvs~dSdl------- 386 (687)
T COG3345 342 SLGDWLVNSEKFP-------------SGIEELIEAIAE-NG-LI-FGIW---------LEPE---MVSEDSDL------- 386 (687)
T ss_pred hhhceecchhhcc-------------ccHHHHHHHHHH-cC-Cc-ccee---------ecch---hcccchHH-------
Confidence 47788755 8999 599999999999 58 88 9999 7787 555 7775
Q ss_pred CcccccccccccceeccC-----------CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCCh-hHHH
Q 011675 365 GLELTMEDLAVDKIVNNG-----------VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGR-VDLA 432 (480)
Q Consensus 365 g~~~~~pd~a~~~~~~~G-----------l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggr-v~l~ 432 (480)
..++|||++. ++| +.+.+|.-+.+.+..+...|-..-||++|+|++.-+--++..+-+. +...
T Consensus 387 --frqHPDWvvk---~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqr 461 (687)
T COG3345 387 --FRQHPDWVVK---VNGYPLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQR 461 (687)
T ss_pred --HhhCCCeEEe---cCCccccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCCccccchH
Confidence 3568888753 222 4678899999999999999999999999999987655554433222 1222
Q ss_pred HHHHHHHHHHHHhccCCCceEeecCCCCCcc
Q 011675 433 KAYYKALTASVRKHFKGNGVIASMEHCNDFM 463 (480)
Q Consensus 433 ~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~l 463 (480)
...|+-.+ .+..+||.....+|.+....+=
T Consensus 462 y~ly~l~~-~l~~k~~~i~FeScasGg~r~d 491 (687)
T COG3345 462 YQLYRLFD-QLNLKFPHILFESCASGGERID 491 (687)
T ss_pred HHHHHHHH-HhhhcCCCchhhhhcccccccc
Confidence 23355444 5778999888999998885543
No 9
>PLN03231 putative alpha-galactosidase; Provisional
Probab=99.87 E-value=1.7e-21 Score=200.82 Aligned_cols=220 Identities=18% Similarity=0.152 Sum_probs=133.5
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCccc-C
Q 011675 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE-N 294 (480)
Q Consensus 219 ~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~-n 294 (480)
.|||+|||+|+++|||+.|++.++ +.+.|+. ..||+|||||+...+.+.. ..+ ....+.........+.+ .
T Consensus 2 pMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~--~~~--~~~~~~~~~d~~G~l~pd~ 76 (357)
T PLN03231 2 PRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWF--KTS--AKSPGYDLIDKWGRPLPDP 76 (357)
T ss_pred CCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCccccccccccc--ccc--cccccccccCCCCCcccCc
Confidence 489999999999999999999998 5555544 3599999999975321100 000 00000000011233444 4
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCC-CCCCcccc---c
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPK-LSPGLELT---M 370 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~-~spg~~~~---~ 370 (480)
+|||+.+ ..+|||+++++||++ | || +|+.... | +.-- ..+..+|. .+||..++ .
T Consensus 77 ~rFPs~~--------~~~G~k~lADyvHs~-G-LK-fGIY~~~-G----~~tc------a~~~~~pi~G~~Gs~g~~~~a 134 (357)
T PLN03231 77 KRWPSTT--------GGKGFAPIAAKVHAL-G-LK-LGIHVMR-G----ISTT------AVKKKTPILGAFKSNGHAWNA 134 (357)
T ss_pred ccCCCCc--------cccCcHHHHHHHHhC-C-cc-eEEEecC-C----ccch------hcccCCccCCCCcccccccch
Confidence 8999532 235999999999996 7 98 8887321 1 2110 00011111 23444333 2
Q ss_pred ccccccce-------eccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHH
Q 011675 371 EDLAVDKI-------VNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASV 443 (480)
Q Consensus 371 pd~a~~~~-------~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~ 443 (480)
.|++.... ...|++... ..++.||+.+.+.+++|||||||+|++..-. ....+...++.+||.++
T Consensus 135 ~Dia~~~~~c~~~~~~~~~v~~~~-~gaq~y~~~~a~~fA~WGVDylK~D~c~~~~------~~~~~~y~~m~~AL~~t- 206 (357)
T PLN03231 135 KDIALMDQACPWMQQCFVGVNTSS-EGGKLFIQSLYDQYASWGIDFIKHDCVFGAE------NPQLDEILTVSKAIRNS- 206 (357)
T ss_pred hhhccccccccccccccccccccc-hhHHHHHHHHHHHHHHhCCCEEeecccCCCC------cccHHHHHHHHHHHHHh-
Confidence 34332111 112445444 5889999999999999999999999753211 01223344667777665
Q ss_pred HhccCCCceEeecCCCCCcccc-----cccceeeeccCCCC
Q 011675 444 RKHFKGNGVIASMEHCNDFMLL-----GTEAIALGRVGMTS 479 (480)
Q Consensus 444 ~~~F~~~~iI~CMs~~~~~l~~-----~~~s~~~~R~SDDF 479 (480)
+|.|+.++|........ ++.+++| |+|+|+
T Consensus 207 -----GRpIv~Slc~g~~~~~~~~~~i~~~an~W-R~s~DI 241 (357)
T PLN03231 207 -----GRPMIYSLSPGDGATPGLAARVAQLVNMY-RVTGDD 241 (357)
T ss_pred -----CCCeEEEecCCCCCCchhhhhhhhhcCcc-cccCCc
Confidence 89999999976443221 2447899 999996
No 10
>PLN02229 alpha-galactosidase
Probab=99.86 E-value=1.5e-21 Score=204.69 Aligned_cols=169 Identities=18% Similarity=0.270 Sum_probs=116.8
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccC-
Q 011675 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN- 294 (480)
Q Consensus 219 ~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n- 294 (480)
.||||||++|++++||+.|++.++.+.+.|+. +++++||||||...+|.. .++.+|
T Consensus 64 pmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~--------------------G~l~~d~ 123 (427)
T PLN02229 64 QMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSK--------------------GQLVPDP 123 (427)
T ss_pred CceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCC--------------------CCEEECh
Confidence 38999999999999999999999986544444 459999999997654422 345554
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCccccccccc
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a 374 (480)
+||| +|||+++++||++ | || +|+| ..++.. .|...||..+.+
T Consensus 124 ~rFP-------------~G~k~ladyiH~~-G-lK-fGIy---------~d~G~~---------TC~~~pGS~g~e---- 165 (427)
T PLN02229 124 KTFP-------------SGIKLLADYVHSK-G-LK-LGIY---------SDAGVF---------TCQVRPGSLFHE---- 165 (427)
T ss_pred hhcC-------------CcHHHHHHHHHHC-C-Cc-eEEe---------ccCCCc---------ccCCCCCCccHH----
Confidence 7899 5999999999996 8 99 9998 333210 011223332211
Q ss_pred ccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEe
Q 011675 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (480)
Q Consensus 375 ~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~ 454 (480)
..+++ .+++|||||||+|.++... . ...+...++.+||.+. |+.|..
T Consensus 166 -------------~~DA~--------~fA~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~t------GRpI~~ 212 (427)
T PLN02229 166 -------------VDDAD--------IFASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNAT------GRSIFY 212 (427)
T ss_pred -------------HHHHH--------HHHHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHhh------CCCcEE
Confidence 12333 4599999999999985411 1 1123344566666654 889999
Q ss_pred ecCCCCC---cccccccceeeeccCCCC
Q 011675 455 SMEHCND---FMLLGTEAIALGRVGMTS 479 (480)
Q Consensus 455 CMs~~~~---~l~~~~~s~~~~R~SDDF 479 (480)
++|.+.. ..|-.+..++| |+|+|+
T Consensus 213 SlC~WG~~~p~~w~~~~~n~W-R~s~DI 239 (427)
T PLN02229 213 SLCEWGVDDPALWAGKVGNSW-RTTDDI 239 (427)
T ss_pred EecCCCCCCHHHHHHhhcCee-eccCCc
Confidence 9998633 22444678999 999997
No 11
>PLN02692 alpha-galactosidase
Probab=99.86 E-value=2.1e-21 Score=202.78 Aligned_cols=170 Identities=20% Similarity=0.225 Sum_probs=122.6
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc-cC
Q 011675 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-EN 294 (480)
Q Consensus 219 ~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n 294 (480)
.+|||||++|+++|+|+.|++.++.+.+.|+. +.+++||||||...+|.. .++. ++
T Consensus 57 pmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~--------------------G~~~~d~ 116 (412)
T PLN02692 57 PMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEK--------------------GNLVPKK 116 (412)
T ss_pred cceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCC--------------------CCeeeCh
Confidence 48999999999999999999999988777655 569999999998765532 2244 46
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCccccccccc
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a 374 (480)
+||| +|||+++++||++ | || +|+|.. ++. .+ |.. .
T Consensus 117 ~kFP-------------~G~k~ladyiH~~-G-LK-fGIy~d---------~G~-----~t----C~~------~----- 151 (412)
T PLN02692 117 STFP-------------SGIKALADYVHSK-G-LK-LGIYSD---------AGY-----FT----CSK------T----- 151 (412)
T ss_pred hhcC-------------CcHHHHHHHHHHC-C-Cc-eEEEec---------CCc-----cc----cCC------C-----
Confidence 8999 5999999999996 8 99 999942 221 00 100 0
Q ss_pred ccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEe
Q 011675 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (480)
Q Consensus 375 ~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~ 454 (480)
.| ..+.+|+...+.+++|||||||+|.+..- +.. ..+..+++.+||.+. |+.|+.
T Consensus 152 ------------~p-GS~g~e~~DA~~fA~WGvDylK~D~C~~~-----~~~-~~~~y~~m~~AL~~t------GRpI~~ 206 (412)
T PLN02692 152 ------------MP-GSLGHEEQDAKTFASWGIDYLKYDNCNND-----GSK-PTVRYPVMTRALMKA------GRPIFF 206 (412)
T ss_pred ------------CC-CchHHHHHHHHHHHhcCCCEEeccccCCC-----Ccc-hhHHHHHHHHHHHHh------CCCeEE
Confidence 01 23567777778889999999999997531 111 112233455566544 899999
Q ss_pred ecCCCCCc---ccccccceeeeccCCCC
Q 011675 455 SMEHCNDF---MLLGTEAIALGRVGMTS 479 (480)
Q Consensus 455 CMs~~~~~---l~~~~~s~~~~R~SDDF 479 (480)
++|.++.. .|..+..++| |+|+|+
T Consensus 207 SlC~wg~~~p~~w~~~~~n~W-R~s~DI 233 (412)
T PLN02692 207 SLCEWGDMHPALWGSKVGNSW-RTTNDI 233 (412)
T ss_pred EecCCCcCChhhhhhhcCCcc-cccccc
Confidence 99988542 2334678999 999997
No 12
>PLN02808 alpha-galactosidase
Probab=99.85 E-value=6.9e-21 Score=198.17 Aligned_cols=170 Identities=16% Similarity=0.205 Sum_probs=119.9
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCccc-C
Q 011675 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE-N 294 (480)
Q Consensus 219 ~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~-n 294 (480)
.||||||++|++++||+.|++.++.|++.|+. +++|+||||||...++.. .++.+ .
T Consensus 33 pmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~--------------------G~~~~d~ 92 (386)
T PLN02808 33 QMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ--------------------GNLVPKA 92 (386)
T ss_pred cceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC--------------------CCEeeCh
Confidence 38999999999999999999999997766665 569999999998755432 23444 4
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCccccccccc
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLA 374 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a 374 (480)
+||| +||++++++||++ | || +|+|.. ++.. ...- ..|
T Consensus 93 ~rFP-------------~G~~~lad~iH~~-G-lk-fGiy~~---------~G~~----tC~~----~~p---------- 129 (386)
T PLN02808 93 STFP-------------SGIKALADYVHSK-G-LK-LGIYSD---------AGTL----TCSK----TMP---------- 129 (386)
T ss_pred hhcC-------------ccHHHHHHHHHHC-C-Cc-eEEEec---------CCcc----ccCC----CCC----------
Confidence 8999 5999999999995 7 99 999942 2210 0000 011
Q ss_pred ccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEe
Q 011675 375 VDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIA 454 (480)
Q Consensus 375 ~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~ 454 (480)
..+.+|+...+.+++|||||||+|.++.- +. ...+...++.+||.++ ++.|..
T Consensus 130 ---------------Gs~~~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~~~~~y~~m~~AL~~t------GRpi~~ 182 (386)
T PLN02808 130 ---------------GSLGHEEQDAKTFASWGIDYLKYDNCENT-----GT-SPQERYPKMSKALLNS------GRPIFF 182 (386)
T ss_pred ---------------cchHHHHHHHHHHHHhCCCEEeecCcCCC-----Cc-cHHHHHHHHHHHHHHh------CCCeEE
Confidence 23566677777789999999999997531 11 1122233455555544 889999
Q ss_pred ecCCCCC-cc--cccccceeeeccCCCC
Q 011675 455 SMEHCND-FM--LLGTEAIALGRVGMTS 479 (480)
Q Consensus 455 CMs~~~~-~l--~~~~~s~~~~R~SDDF 479 (480)
++|.+.. .. |..+..++| |+|+|+
T Consensus 183 slc~wg~~~p~~w~~~~~n~W-R~s~Di 209 (386)
T PLN02808 183 SLCEWGQEDPATWAGDIGNSW-RTTGDI 209 (386)
T ss_pred EecCCCCCCHHHHHHhhcCcc-cccCCc
Confidence 9987531 11 234568899 999996
No 13
>PLN02899 alpha-galactosidase
Probab=99.84 E-value=3.5e-20 Score=199.67 Aligned_cols=219 Identities=13% Similarity=0.151 Sum_probs=131.3
Q ss_pred ccccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCccc-C
Q 011675 219 KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQE-N 294 (480)
Q Consensus 219 ~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~-n 294 (480)
.|||+|||.|+.+|||+.|++.++. .+.|+. +.||+|||||+....++. ..+. .|..-......+.+ .
T Consensus 32 PMGWNSWn~f~~~I~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~--~~~s-----~g~~~~D~~GrLvPDp 103 (633)
T PLN02899 32 PRGWNSYDSFSWIVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGA--YVDS-----LGFDVIDEWGRPIPDP 103 (633)
T ss_pred CCCCcchhhhccCCCHHHHHHHHHH-HHcchHhhCCeEEEEcccccccccccc--cccc-----ccccccCCCCCCccCc
Confidence 4899999999999999999999984 344444 359999999997543211 0000 00000011234454 4
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCccc-------ccCCCCCCcc
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTV-------VKPKLSPGLE 367 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l-------~~p~~spg~~ 367 (480)
+|||+.+ ..+|||++.++||.+ | || +|+. ...| +.--+ ...++.+ .|+.. |..
T Consensus 104 ~RFPSs~--------~g~GmK~LADYVHsk-G-LK-FGIY-~~~G----i~tcA--~~~~~PI~gs~~g~~y~~s--~~~ 163 (633)
T PLN02899 104 GRWPSSR--------GGKGFTEVAEKVHAM-G-LK-FGIH-VMRG----ISTQA--VNANTPILDAVKGGAYEES--GRQ 163 (633)
T ss_pred ccCCCCc--------cCCCcHHHHHHHHhC-C-cc-eEEE-ecCC----Ccccc--cccCCcccccccccccccc--ccc
Confidence 8999632 236999999999995 7 88 8887 2232 21000 0001100 01000 011
Q ss_pred cccccccccceecc----CC-CC-CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHH
Q 011675 368 LTMEDLAVDKIVNN----GV-GF-VPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTA 441 (480)
Q Consensus 368 ~~~pd~a~~~~~~~----Gl-~l-v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~ 441 (480)
-+..|++....+-. |. ++ .+++.++.||+.+++.+++|||||||+|.... + .+ ..+..+++.+||.+
T Consensus 164 ~~a~DIa~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-~----~~--~~~ey~~ms~AL~a 236 (633)
T PLN02899 164 WRAKDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-D----DF--DLEEITYVSEVLKE 236 (633)
T ss_pred cchhhccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-C----CC--ChHHHHHHHHHHHH
Confidence 22344432222211 11 11 12457799999999999999999999997532 1 11 22334667777776
Q ss_pred HHHhccCCCceEeecCCCCCcccc-----cccceeeeccCCCC
Q 011675 442 SVRKHFKGNGVIASMEHCNDFMLL-----GTEAIALGRVGMTS 479 (480)
Q Consensus 442 s~~~~F~~~~iI~CMs~~~~~l~~-----~~~s~~~~R~SDDF 479 (480)
+ ++.|+.++|.+.+.... .+.+++| |+++|+
T Consensus 237 T------GRPIvySLspG~~~~p~wa~~v~~~aNmW-RitgDI 272 (633)
T PLN02899 237 L------DRPIVYSLSPGTSATPTMAKEVSGLVNMY-RITGDD 272 (633)
T ss_pred h------CCCeEEEecCCcccchhhhhhhhccCccc-eecCCc
Confidence 5 89999999976443221 2446899 999996
No 14
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.57 E-value=1.7e-14 Score=146.64 Aligned_cols=152 Identities=24% Similarity=0.399 Sum_probs=106.9
Q ss_pred ccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc-c
Q 011675 215 PIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-E 293 (480)
Q Consensus 215 ~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~ 293 (480)
.++..+.||||++++..+|++.|++.++.+++.|+|...+.|||+||...+ +|+ +
T Consensus 10 ~~~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g------------------------~f~~d 65 (303)
T cd06592 10 RMFRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG------------------------DFDFD 65 (303)
T ss_pred HHhCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC------------------------ccccC
Confidence 457889999999999999999999999999999999999999999997532 244 3
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCccccccc
Q 011675 294 NFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMED 372 (480)
Q Consensus 294 n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd 372 (480)
++||| +++++|++||++ | +| +.+|..+. |.++++..+. ..+=...+...| ..|.
T Consensus 66 ~~~FP--------------dp~~mi~~l~~~-G-~k-~~l~i~P~-----i~~~s~~~~e~~~~g~~vk~~~g---~~~~ 120 (303)
T cd06592 66 PTKFP--------------DPKGMIDQLHDL-G-FR-VTLWVHPF-----INTDSENFREAVEKGYLVSEPSG---DIPA 120 (303)
T ss_pred hhhCC--------------CHHHHHHHHHHC-C-Ce-EEEEECCe-----eCCCCHHHHhhhhCCeEEECCCC---CCCc
Confidence 57999 478999999994 8 88 99995554 4444321111 000000011111 1111
Q ss_pred cccccee--ccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 373 LAVDKIV--NNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 373 ~a~~~~~--~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
. ...+ ..+ +++.+|+...++.+.+.+++.+.||||+|.|.+..
T Consensus 121 ~--~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 166 (303)
T cd06592 121 L--TRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGEA 166 (303)
T ss_pred c--cceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCCCc
Confidence 1 0011 011 58899988888887777777799999999999764
No 15
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.3e-12 Score=133.79 Aligned_cols=169 Identities=20% Similarity=0.292 Sum_probs=116.7
Q ss_pred ccccccccccccccC----------HHHHHHHHHHHHhCCCC---CcEEEEcCCcCcccCCCCCCCcccccccccCCcCC
Q 011675 219 KFGWCTWDAFYLTVQ----------PHGVMEGVKGLVDGGCP---PGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP 285 (480)
Q Consensus 219 ~~GWCTWdafy~~vt----------~~~I~~~l~~L~~~G~~---~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~ 285 (480)
.|||.+|+.|..+++ |.-+.+.++.+++.|.. ..++.|||+|-...++.+
T Consensus 34 ~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~----------------- 96 (414)
T KOG2366|consen 34 QMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSD----------------- 96 (414)
T ss_pred CcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCc-----------------
Confidence 489999999999888 99999999998887744 679999999999877644
Q ss_pred ccccCcccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCC
Q 011675 286 CRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPG 365 (480)
Q Consensus 286 ~rl~~~~~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg 365 (480)
.||. .+.++|| +|++++.+++|.+ | +| +| |..+. | +.+-..| ||
T Consensus 97 grLv--a~~~rFP-------------~Gi~~ladyvHs~-G-LK-lG-----------iYsD~-G--~~TC~g~----PG 140 (414)
T KOG2366|consen 97 GRLV--ADPSRFP-------------SGIKALADYVHSK-G-LK-LG-----------IYSDA-G--NFTCAGY----PG 140 (414)
T ss_pred cccc--cChhhcc-------------cchhhhhhchhhc-C-Cc-ee-----------eeecc-C--chhhccC----Cc
Confidence 2342 3458899 5999999999996 6 77 43 33332 1 2222222 23
Q ss_pred cccccccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh-hhhhccCCChhHHHHHHHHHHHHHHH
Q 011675 366 LELTMEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL-EILCENYGGRVDLAKAYYKALTASVR 444 (480)
Q Consensus 366 ~~~~~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l-~~l~~~~ggrv~l~~ay~~AL~~s~~ 444 (480)
+.+++. .+|+.| ++||||++|.|+.... .+. .+.-..+.+||.+.
T Consensus 141 S~~~e~-----------------~DA~tF--------A~WgvDylKlD~C~~~~~~~-------~~~Yp~ms~aLN~t-- 186 (414)
T KOG2366|consen 141 SLGHEE-----------------SDAKTF--------ADWGVDYLKLDGCFNNLITM-------PEGYPIMSRALNNT-- 186 (414)
T ss_pred ccchhh-----------------hhhhhh--------HhhCCcEEeccccccccccc-------cccchhHHHHHhcc--
Confidence 322221 356776 8999999999998652 111 12222344455443
Q ss_pred hccCCCceEeecCCCCCccc----------ccccceeeeccCCCC
Q 011675 445 KHFKGNGVIASMEHCNDFML----------LGTEAIALGRVGMTS 479 (480)
Q Consensus 445 ~~F~~~~iI~CMs~~~~~l~----------~~~~s~~~~R~SDDF 479 (480)
|+.++.+.|.++...- -++..+.| |+.||.
T Consensus 187 ----Grpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~W-R~~dDI 226 (414)
T KOG2366|consen 187 ----GRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSW-RTTDDI 226 (414)
T ss_pred ----CCceEEEeccCcccccCccCCCcchhhhhhhccc-cchhhh
Confidence 8899999888855432 12678899 999985
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.18 E-value=2.9e-10 Score=115.56 Aligned_cols=152 Identities=16% Similarity=0.205 Sum_probs=95.7
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-.|.|. -.|++.|++.++.+++.|||...++|||+|+... ++.+|+
T Consensus 6 ~P~wa~G~~~~~~~----y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~----------------------~~~~f~ 59 (308)
T cd06593 6 PPAWSFGLWLSRSF----YYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEF----------------------QWCDFE 59 (308)
T ss_pred CchHHHHHHHHccc----CCCHHHHHHHHHHHHHcCCCeeEEEEecccccCC----------------------cceeeE
Confidence 44444333335544 3899999999999999999999999999999432 134566
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCccccc
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTM 370 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~ 370 (480)
+.+||| .+++++++||+ .| +| +.+|..+. |.++++..++ ..+ -+....+ .+..
T Consensus 60 ~d~~~FP--------------d~~~~i~~l~~-~G-~~-~~~~~~P~-----i~~~~~~~~e~~~~-g~~v~~~--~g~~ 114 (308)
T cd06593 60 FDPDRFP--------------DPEGMLSRLKE-KG-FK-VCLWINPY-----IAQKSPLFKEAAEK-GYLVKKP--DGSV 114 (308)
T ss_pred ECcccCC--------------CHHHHHHHHHH-CC-Ce-EEEEecCC-----CCCCchhHHHHHHC-CeEEECC--CCCe
Confidence 347999 46899999999 48 88 99996543 4444322111 000 0000010 0111
Q ss_pred ccccccceeccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 371 EDLAVDKIVNNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 371 pd~a~~~~~~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
....+.. ...+ +++.+|+.. .+|.+.++.+.+.||||+|.|.+..
T Consensus 115 ~~~~~w~-g~~~~~Dftnp~a~-~w~~~~~~~~~~~Gid~~~~D~~e~ 160 (308)
T cd06593 115 WQWDLWQ-PGMGIIDFTNPDAC-KWYKDKLKPLLDMGVDCFKTDFGER 160 (308)
T ss_pred eeecccC-CCcccccCCCHHHH-HHHHHHHHHHHHhCCcEEecCCCCC
Confidence 1000000 0011 578888655 5666677788889999999999754
No 17
>PRK10658 putative alpha-glucosidase; Provisional
Probab=99.08 E-value=8.3e-09 Score=115.35 Aligned_cols=177 Identities=20% Similarity=0.249 Sum_probs=112.8
Q ss_pred EEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcC
Q 011675 179 VYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDD 258 (480)
Q Consensus 179 l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDD 258 (480)
.|+-.|++|-+++++..++. +. +.-+|.+.-++-.|+ .|+.+.+++.|++.++.+++.|||...+.||.
T Consensus 238 yy~~~G~tp~~v~~~Yt~LT----Gr-----p~lpP~WalG~w~s~--~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~ 306 (665)
T PRK10658 238 YFVIDGPTPKEVLDRYTALT----GR-----PALPPAWSFGLWLTT--SFTTNYDEATVNSFIDGMAERDLPLHVFHFDC 306 (665)
T ss_pred EEEEeCCCHHHHHHHHHHHh----CC-----CCCCchhhhheeeec--ccccCCCHHHHHHHHHHHHHcCCCceEEEEch
Confidence 46778999988888765432 21 223456655553344 35566789999999999999999999999999
Q ss_pred CcCcccCCCCCCCcccccccccCCcCCccccCcc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeec
Q 011675 259 GWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHAL 337 (480)
Q Consensus 259 GWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl 337 (480)
+|+.... |.+|+ ++++||+ .++|+++||++ | +| +.+|.-+
T Consensus 307 ~w~~~~~----------------------~~~f~wd~~~FPd--------------p~~mi~~L~~~-G-~k-~~~~i~P 347 (665)
T PRK10658 307 FWMKEFQ----------------------WCDFEWDPRTFPD--------------PEGMLKRLKAK-G-LK-ICVWINP 347 (665)
T ss_pred hhhcCCc----------------------eeeeEEChhhCCC--------------HHHHHHHHHHC-C-CE-EEEeccC
Confidence 9986421 44566 5689995 46999999995 7 98 8899433
Q ss_pred cCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccC---CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEc
Q 011675 338 CGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNG---VGFVPPELVDQMYEGLHSHLEKVGIDGVKVD 413 (480)
Q Consensus 338 ~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~G---l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD 413 (480)
. |.++++..+. ..+=.+.+...|. .+.++.+. ++ ++.+||+...+| .+.++.|.+.|||++|.|
T Consensus 348 ~-----i~~~s~~f~e~~~~gy~vk~~~G~-----~~~~~~W~-g~~~~~Dftnp~ar~W~-~~~~~~l~d~Gvdgfw~D 415 (665)
T PRK10658 348 Y-----IAQKSPLFKEGKEKGYLLKRPDGS-----VWQWDKWQ-PGMAIVDFTNPDACKWY-ADKLKGLLDMGVDCFKTD 415 (665)
T ss_pred C-----cCCCchHHHHHHHCCeEEECCCCC-----EeeeeecC-CCceeecCCCHHHHHHH-HHHHHHHHhcCCcEEEec
Confidence 2 4444321111 0000001111111 11111111 22 588899765555 555566778999999999
Q ss_pred Ccch
Q 011675 414 VIHL 417 (480)
Q Consensus 414 ~q~~ 417 (480)
....
T Consensus 416 ~gE~ 419 (665)
T PRK10658 416 FGER 419 (665)
T ss_pred CCce
Confidence 8654
No 18
>PRK10426 alpha-glucosidase; Provisional
Probab=98.99 E-value=3.9e-07 Score=101.66 Aligned_cols=213 Identities=14% Similarity=0.164 Sum_probs=124.9
Q ss_pred cEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeeccccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 011675 135 PYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPP 214 (480)
Q Consensus 135 ~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P 214 (480)
.|.+++ ++...+.+.-+..+...+.+.++. .-+|+-.|++|.++|++..+..-+ ...+|
T Consensus 147 ~ygv~~---dn~~~~~fd~~~~~~~~~~~~~~~---------~d~y~~~G~~~~~vi~~yt~ltGr---------~p~~P 205 (635)
T PRK10426 147 KYYCHV---DNSAYMNFDFSAPEYHELELWEDK---------ATLRFECADTYISLLEKLTALFGR---------QPELP 205 (635)
T ss_pred CEEEEE---cCCCcEEEEecCCCccEEEEEeCC---------eeEEEEeCCCHHHHHHHHHHhhCC---------CCCCC
Confidence 366654 555555554333333345554432 234667899988888776554221 12245
Q ss_pred cccc-ccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCC-ccccCcc
Q 011675 215 PIVD-KFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMP-CRLLRYQ 292 (480)
Q Consensus 215 ~~~d-~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~-~rl~~~~ 292 (480)
.+.- ++-| .++ -+++.|++.++.+++.|||...+.||| |+..... .|. +-+.+|+
T Consensus 206 ~Wal~G~~~----g~~--~~~~~v~~v~~~~r~~~IP~d~i~ldd-w~~~~~~----------------~~g~~~~~~~~ 262 (635)
T PRK10426 206 DWAYDGVTL----GIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQD-WSGIRMT----------------SFGKRLMWNWK 262 (635)
T ss_pred hhhccCccc----ccc--CCHHHHHHHHHHHHHcCCCeeEEEEec-ccccccc----------------cccccccccce
Confidence 4432 4322 222 257889999999999999999999985 9865431 011 1234566
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCccccc
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTM 370 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~ 370 (480)
+.++|| ..+.+|++||++ | +| +.+|.-+. |.++.+..+. ..+=.+.+...|.
T Consensus 263 ~d~~~FP--------------dp~~mi~~L~~~-G-~k-~v~~i~P~-----v~~~~~~y~e~~~~gy~vk~~~g~---- 316 (635)
T PRK10426 263 WDSERYP--------------QLDSRIKQLNEE-G-IQ-FLGYINPY-----LASDGDLCEEAAEKGYLAKDADGG---- 316 (635)
T ss_pred EChhhCC--------------CHHHHHHHHHHC-C-CE-EEEEEcCc-----cCCCCHHHHHHHHCCcEEECCCCC----
Confidence 468999 467999999995 7 88 88883322 3333221111 0000011111111
Q ss_pred cccccccee-ccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675 371 EDLAVDKIV-NNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418 (480)
Q Consensus 371 pd~a~~~~~-~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l 418 (480)
+-+ .+... ..+ ++++||+...+|.+.+++.|.+.||||+|.|++..+
T Consensus 317 ~~~-~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~~ 365 (635)
T PRK10426 317 DYL-VEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEYL 365 (635)
T ss_pred EEE-eEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCCC
Confidence 100 00000 112 588999888888888889999999999999997643
No 19
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.98 E-value=3.9e-09 Score=108.16 Aligned_cols=154 Identities=19% Similarity=0.207 Sum_probs=102.9
Q ss_pred CCcccccccccccccccc---ccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCcccc
Q 011675 213 PPPIVDKFGWCTWDAFYL---TVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLL 289 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~---~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~ 289 (480)
+|.+.-++-.|.|. |. +.+++.|++.++.+++.+||...+.||++|++.... . +.
T Consensus 6 pP~walG~~~sr~~--Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~-~-------------------~~ 63 (317)
T cd06599 6 VPRWSLGYSGSTMY--YTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGG-K-------------------RY 63 (317)
T ss_pred CchHHHHHHhcCCC--CCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCC-c-------------------ee
Confidence 45666677788883 43 467999999999999999999999999999986321 1 12
Q ss_pred Ccc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcc
Q 011675 290 RYQ-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLE 367 (480)
Q Consensus 290 ~~~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~ 367 (480)
+|+ +.++||+ .++||++||++ | +| +.+|.-+. |.++++..+. ..+ -+..... .
T Consensus 64 ~f~~d~~~FPd--------------p~~mi~~L~~~-g-~k-~~~~i~P~-----i~~~~~~y~e~~~~-g~~v~~~--~ 118 (317)
T cd06599 64 VFNWNKDRFPD--------------PAAFVAKFHER-G-IR-LAPNIKPG-----LLQDHPRYKELKEA-GAFIKPP--D 118 (317)
T ss_pred eeecCcccCCC--------------HHHHHHHHHHC-C-CE-EEEEeCCc-----ccCCCHHHHHHHHC-CcEEEcC--C
Confidence 244 4589994 67999999995 7 88 78895444 4444322222 111 1111110 1
Q ss_pred cccccccccceeccC----CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 368 LTMEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 368 ~~~pd~a~~~~~~~G----l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+..|.+. . ...| +++.+|+...+|.+.+.+.|.+.||||+|.|.+.
T Consensus 119 g~~~~~~--~-~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 119 GREPSIG--Q-FWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred CCCccee--c-ccCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 1122111 0 1122 5889998877777777799999999999999874
No 20
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.93 E-value=1.1e-08 Score=104.87 Aligned_cols=151 Identities=15% Similarity=0.145 Sum_probs=101.1
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-+|.|.- -+++.|++.++.+++.++|...++||..|+... +|.+|+
T Consensus 6 ~P~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~----------------------~~~~f~ 59 (319)
T cd06591 6 MPKWAYGFWQSKERY----KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQ----------------------GWGEWK 59 (319)
T ss_pred CchHHHHHHHhcccC----CCHHHHHHHHHHHHHhCCCccEEEEechhhcCC----------------------CceeEE
Confidence 456666677788742 389999999999999999999999999887532 234566
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCccccc
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTM 370 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~ 370 (480)
+.+|||+ .+++|++||++ | +| |.+|.-+. |.++.+..+. ..+-.+.+...| ..
T Consensus 60 ~d~~~FPd--------------p~~mi~~L~~~-G-~k-v~~~i~P~-----v~~~~~~y~e~~~~g~~v~~~~g---~~ 114 (319)
T cd06591 60 FDPERFPD--------------PKAMVRELHEM-N-AE-LMISIWPT-----FGPETENYKEMDEKGYLIKTDRG---PR 114 (319)
T ss_pred EChhhCCC--------------HHHHHHHHHHC-C-CE-EEEEecCC-----cCCCChhHHHHHHCCEEEEcCCC---Ce
Confidence 4689994 67999999994 7 87 77884332 4444322111 111011111111 11
Q ss_pred ccccccceeccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 371 EDLAVDKIVNNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 371 pd~a~~~~~~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+...|. ...+ +++.+|+...+|++.+++.|.+.||||+|.|.+.
T Consensus 115 ~~~~w~--g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 115 VTMQFG--GNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred eeeeCC--CCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 100000 0012 5889999888889999999999999999999985
No 21
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.92 E-value=1.7e-08 Score=103.43 Aligned_cols=155 Identities=19% Similarity=0.200 Sum_probs=99.3
Q ss_pred CCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCc
Q 011675 212 TPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY 291 (480)
Q Consensus 212 ~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~ 291 (480)
-+|.+.-++-.|+|. | -+++.|++.++.+++.+||...+.||++|+..+.+.. ...+|
T Consensus 5 l~P~wa~G~~~s~~~--y--~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~------------------~~~~f 62 (317)
T cd06598 5 LPPRWALGNWASRFG--Y--RNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG------------------HMGNL 62 (317)
T ss_pred CCchHHHHHHHhcCC--C--CCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC------------------ceeee
Confidence 356666677778874 2 3799999999999999999999999999997643211 13346
Q ss_pred c-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-Ccccc-cCCCCCCccc
Q 011675 292 Q-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVV-KPKLSPGLEL 368 (480)
Q Consensus 292 ~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~-~p~~spg~~~ 368 (480)
+ +.+|||+ .+++|++||++ | +| |.+|.-+. |.++.+..+. ..+-. ..+...|
T Consensus 63 ~wd~~~FPd--------------p~~mi~~L~~~-G-~k-~~~~v~P~-----v~~~~~~y~e~~~~g~l~~~~~~~--- 117 (317)
T cd06598 63 DWDRKAFPD--------------PAGMIADLAKK-G-VK-TIVITEPF-----VLKNSKNWGEAVKAGALLKKDQGG--- 117 (317)
T ss_pred EeccccCCC--------------HHHHHHHHHHc-C-Cc-EEEEEcCc-----ccCCchhHHHHHhCCCEEEECCCC---
Confidence 6 4689995 57999999995 7 88 88994333 4443322111 11100 0011101
Q ss_pred cccccccccee-ccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 369 TMEDLAVDKIV-NNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 369 ~~pd~a~~~~~-~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.|-.. +-+. ..+ ++++||+. ..+|.+.++.+.+.|||++|.|.+.
T Consensus 118 -~~~~~-~~w~g~~~~~Dftnp~a-~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 118 -VPTLF-DFWFGNTGLIDWFDPAA-QAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred -CEeee-eccCCCccccCCCCHHH-HHHHHHHHHHhhhCCccEEEecCCC
Confidence 11100 0000 112 58889975 5666667777889999999999975
No 22
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.87 E-value=1.5e-08 Score=102.76 Aligned_cols=150 Identities=19% Similarity=0.287 Sum_probs=100.9
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-+|.|. | .|++.|++.++.+++.|||...+.||++|+....... ...++.+|+
T Consensus 7 ~P~walG~~qsr~~--y--~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~---------------~~~~~~~ft 67 (292)
T cd06595 7 LPRYAFGNWWSRYW--P--YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSK---------------YGSGWTGYS 67 (292)
T ss_pred CchHHHHhHhhCCc--C--CCHHHHHHHHHHHHHhCCCccEEEEeccccccccccc---------------ccCCcceeE
Confidence 55666677778874 2 3899999999999999999999999999997532100 002355677
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCC--CCCCcccc
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPK--LSPGLELT 369 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~--~spg~~~~ 369 (480)
++++||+ .+++|++||++ | +| +.+| +.|... ...... .|.+ ...++...
T Consensus 68 ~d~~~FPd--------------p~~mi~~Lh~~-G-~k-~v~~---------v~P~~~-~~~~~~-~y~~~~~~~~~~~~ 119 (292)
T cd06595 68 WNRKLFPD--------------PEKLLQDLHDR-G-LK-VTLN---------LHPADG-IRAHED-QYPEMAKALGVDPA 119 (292)
T ss_pred EChhcCCC--------------HHHHHHHHHHC-C-CE-EEEE---------eCCCcc-cCCCcH-HHHHHHHhcCCCcc
Confidence 5689994 57999999995 7 88 7799 445321 110110 0100 00111000
Q ss_pred cccccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 370 MEDLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 370 ~pd~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.. .... +++++|+...+|++.+++.|.+.|||++|.|.+.
T Consensus 120 ~~----~~~~---~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E 159 (292)
T cd06595 120 TE----GPIL---FDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQ 159 (292)
T ss_pred cC----CeEE---ecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCC
Confidence 00 0000 4789999888999999999999999999999864
No 23
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.84 E-value=6.4e-08 Score=102.89 Aligned_cols=173 Identities=22% Similarity=0.342 Sum_probs=104.4
Q ss_pred EEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCC
Q 011675 180 YVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDG 259 (480)
Q Consensus 180 ~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDG 259 (480)
|+=.|++|-++|++..+..- ....+|.+.-++-+|.|.. -|++.|.+.++.+++.++|...+.||++
T Consensus 1 y~~~G~~~~~v~~~y~~ltG---------~~~~pP~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~ 67 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTG---------RPPLPPRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDD 67 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHS---------SS----GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GG
T ss_pred CEEeCcCHHHHHHHHHHHHC---------CCCCCchhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccc
Confidence 34468888777777655532 1334666766777777764 5699999999999999999999999999
Q ss_pred cCcccCCCCCCCcccccccccCCcCCccccCcc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeecc
Q 011675 260 WQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALC 338 (480)
Q Consensus 260 WQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~ 338 (480)
|+.... +|+ +.++|| +++.+++.||++ | +| +.+|..+.
T Consensus 68 ~~~~~~------------------------~f~~d~~~FP--------------d~~~~~~~l~~~-G-~~-~~~~~~P~ 106 (441)
T PF01055_consen 68 YQDGYG------------------------DFTWDPERFP--------------DPKQMIDELHDQ-G-IK-VVLWVHPF 106 (441)
T ss_dssp GSBTTB------------------------TT-B-TTTTT--------------THHHHHHHHHHT-T--E-EEEEEESE
T ss_pred cccccc------------------------cccccccccc--------------chHHHHHhHhhC-C-cE-EEEEeecc
Confidence 998543 234 357999 678999999995 7 88 88995543
Q ss_pred CCCCCCCCCCC---CCCC-CcccccCCCCCCcccccccccccceec--cC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Q 011675 339 GYWGGLRPNIP---GLPE-KTTVVKPKLSPGLELTMEDLAVDKIVN--NG-VGFVPPELVDQMYEGLHSHLEKVGIDGVK 411 (480)
Q Consensus 339 GYWgGv~P~~~---~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~--~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVK 411 (480)
|.+++. .... ..+=.+.+...| .+ .....+. .+ +++.+|+...+|.+.+..++...||||+|
T Consensus 107 -----v~~~~~~~~~~~~~~~~~~~v~~~~g----~~--~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w 175 (441)
T PF01055_consen 107 -----VSNDSPDYENYDEAKEKGYLVKNPDG----SP--YIGRVWPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWW 175 (441)
T ss_dssp -----EETTTTB-HHHHHHHHTT-BEBCTTS----SB---EEEETTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEE
T ss_pred -----cCCCCCcchhhhhHhhcCceeecccC----Cc--ccccccCCcccccCCCChhHHHHHHHHHHHHHhccCCceEE
Confidence 544432 1111 000000011111 11 1111110 11 58899987666667777776677999999
Q ss_pred EcCcch
Q 011675 412 VDVIHL 417 (480)
Q Consensus 412 vD~q~~ 417 (480)
.|.+..
T Consensus 176 ~D~~E~ 181 (441)
T PF01055_consen 176 LDFGEP 181 (441)
T ss_dssp EESTTT
T ss_pred eecCCc
Confidence 999644
No 24
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.83 E-value=7.5e-08 Score=98.87 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=98.7
Q ss_pred CCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCc
Q 011675 212 TPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY 291 (480)
Q Consensus 212 ~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~ 291 (480)
-+|.+.-++-+|.+.. +++.|++.++.+++.|||...+.|| .|+....... + .+-+.+|
T Consensus 5 ~~P~wa~G~~~~~~~~-----s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~--g-------------~~~~~~f 63 (317)
T cd06594 5 ELPDWAYGGAILGLQG-----GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSF--G-------------DRLWWNW 63 (317)
T ss_pred CCchhhhCcEEeeeeC-----CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccc--c-------------ceeeeee
Confidence 3566666665666432 9999999999999999999999999 5875321100 0 0113345
Q ss_pred c-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCC-CC-CcccccCCCCCCccc
Q 011675 292 Q-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGL-PE-KTTVVKPKLSPGLEL 368 (480)
Q Consensus 292 ~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~-~~-~s~l~~p~~spg~~~ 368 (480)
+ +.++||+ .++||++||++ | +| |.+|.-+. |.++.... +. ..+=++.+...|
T Consensus 64 ~~d~~~FPd--------------p~~mi~~Lh~~-G-~~-~~~~i~P~-----v~~~~~~~y~~~~~~g~~vk~~~g--- 118 (317)
T cd06594 64 EWDPERYPG--------------LDELIEELKAR-G-IR-VLTYINPY-----LADDGPLYYEEAKDAGYLVKDADG--- 118 (317)
T ss_pred EEChhhCCC--------------HHHHHHHHHHC-C-CE-EEEEecCc-----eecCCchhHHHHHHCCeEEECCCC---
Confidence 5 5689994 67999999995 7 88 88893322 43332211 11 000001111111
Q ss_pred ccccccccceec-cC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 369 TMEDLAVDKIVN-NG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 369 ~~pd~a~~~~~~-~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
.|-+. ..+.. .+ +++.+|+...+|.+.+..++.+.||||+|.|++..
T Consensus 119 -~~~~~-~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~ 167 (317)
T cd06594 119 -SPYLV-DFGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEY 167 (317)
T ss_pred -Ceeee-ccCCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCCC
Confidence 11000 00010 11 58899998888889999888999999999999864
No 25
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.83 E-value=1.1e-07 Score=98.51 Aligned_cols=165 Identities=16% Similarity=0.238 Sum_probs=96.4
Q ss_pred CCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC-----CCCCCCcccccccccCCcCCc
Q 011675 212 TPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH-----DEDPIDSEGINRTAAGEQMPC 286 (480)
Q Consensus 212 ~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~-----d~~~p~~~~~~~~~~g~q~~~ 286 (480)
-+|.+.-++..|.|. -.+++.|++.++.+++.|||...|.||| ||.... |.+ .-. .++...|.
T Consensus 5 lpP~walG~~~sr~~----Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~-y~~-----~~~~~~~~- 72 (340)
T cd06597 5 LLPKWAFGLWMSANE----WDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQ-YTP-----KDGGAPLS- 72 (340)
T ss_pred CCchHHhhhhhhccC----CCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccch-hcc-----cccCCcce-
Confidence 356666677788874 3689999999999999999999999996 997431 100 000 00001111
Q ss_pred cccC--cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCC-----------CCCC
Q 011675 287 RLLR--YQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIP-----------GLPE 353 (480)
Q Consensus 287 rl~~--~~~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~-----------~~~~ 353 (480)
+.+ |...++|| ..+.+|++||++ | +| |.+|.-+. |.++.. ++++
T Consensus 73 -~~~~~f~~~~~FP--------------dp~~mi~~Lh~~-G-~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~ 129 (340)
T cd06597 73 -YDDFSFPVEGRWP--------------NPKGMIDELHEQ-G-VK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQ 129 (340)
T ss_pred -ecccccCccccCC--------------CHHHHHHHHHHC-C-CE-EEEEecCc-----cccccccccccchhHHHHHHC
Confidence 122 32236788 467999999995 7 87 88995443 333210 0000
Q ss_pred CcccccCCCCCCcccccccccccceeccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 354 KTTVVKPKLSPGLELTMEDLAVDKIVNNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 354 ~s~l~~p~~spg~~~~~pd~a~~~~~~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
+.- + +...|..-..|. .|. ...+ ++++||+...+|.+.+..++.+.||||+|.|+...
T Consensus 130 g~~-v--k~~~G~~~~~~~-~W~--g~~~~~Dftnp~a~~Ww~~~~~~~~~~~Gidg~w~D~~E~ 188 (340)
T cd06597 130 NYL-V--QRGVGKPYRIPG-QWF--PDSLMLDFTNPEAAQWWMEKRRYLVDELGIDGFKTDGGEH 188 (340)
T ss_pred CEE-E--EcCCCCcccccc-ccC--CCceeecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCc
Confidence 110 0 111110000010 000 0011 58899988777766666666789999999998753
No 26
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.80 E-value=6.7e-08 Score=100.10 Aligned_cols=148 Identities=18% Similarity=0.254 Sum_probs=98.3
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-+|.|.. -+++.|++.++.+++.++|...+.||++|+...+ +|+
T Consensus 6 pP~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~------------------------~f~ 57 (339)
T cd06602 6 PPYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRR------------------------DFT 57 (339)
T ss_pred CchHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCcc------------------------cee
Confidence 567777778888853 3789999999999999999999999999996543 244
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCccc-------cc-CCCC
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTV-------VK-PKLS 363 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l-------~~-p~~s 363 (480)
+.++||+++ ++.+|++||++ | +| |.+|.-+. |.++... .++.. -+ .+..
T Consensus 58 ~d~~~FPdp~------------~~~mi~~L~~~-G-~k-~~~~i~P~-----v~~~~~~--~~~~~~~e~~~~g~~v~~~ 115 (339)
T cd06602 58 LDPVRFPGLK------------MPEFVDELHAN-G-QH-YVPILDPA-----ISANEPT--GSYPPYDRGLEMDVFIKND 115 (339)
T ss_pred cccccCCCcc------------HHHHHHHHHHC-C-CE-EEEEEeCc-----cccCcCC--CCCHHHHHHHHCCeEEECC
Confidence 357999642 37999999995 7 88 88994433 4332100 01110 00 0001
Q ss_pred CCcccccccccccceec--cC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 364 PGLELTMEDLAVDKIVN--NG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 364 pg~~~~~pd~a~~~~~~--~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.| .|-+. ..+. .+ +++.||+...+|.+.+..++.+.||||+|.|.+.
T Consensus 116 ~g----~~~~~--~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 165 (339)
T cd06602 116 DG----SPYIG--KVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNE 165 (339)
T ss_pred CC----CEEEE--EeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 11 11000 0110 11 5889998877777777777888999999999975
No 27
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.69 E-value=7e-08 Score=99.74 Aligned_cols=151 Identities=15% Similarity=0.188 Sum_probs=93.7
Q ss_pred CCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCc
Q 011675 212 TPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRY 291 (480)
Q Consensus 212 ~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~ 291 (480)
-+|.+.-++-.|.|.. -|++.|++.++.+++.|||...+.||++|+.... .|
T Consensus 5 l~P~walG~~~s~~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~------------------------~f 56 (339)
T cd06604 5 LPPKWALGYQQSRWSY----YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYR------------------------VF 56 (339)
T ss_pred CCchHHHhHHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCC------------------------ce
Confidence 3566665666666653 3899999999999999999999999999996432 23
Q ss_pred c-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccc
Q 011675 292 Q-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELT 369 (480)
Q Consensus 292 ~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~ 369 (480)
+ +.++||+ .+.+++++|++ | +| +.+|+.+.- .+.|..+...+ ..+=.+.+...|
T Consensus 57 ~~d~~~fPd--------------p~~m~~~l~~~-g-~~-~~~~~~P~v---~~~~~~~~~~e~~~~g~~v~~~~g---- 112 (339)
T cd06604 57 TWDKERFPD--------------PKELIKELHEQ-G-FK-VVTIIDPGV---KVDPGYDVYEEGLENDYFVKDPDG---- 112 (339)
T ss_pred eeccccCCC--------------HHHHHHHHHHC-C-CE-EEEEEeCce---eCCCCChHHHHHHHCCeEEECCCC----
Confidence 3 3579994 67999999995 7 88 889954430 01121111111 000000011111
Q ss_pred ccccccccee-ccC-CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 370 MEDLAVDKIV-NNG-VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 370 ~pd~a~~~~~-~~G-l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.|-+. ..+. ..+ +++.+|+...+ |.+.++.+.+.||||+|.|.+.
T Consensus 113 ~~~~~-~~w~g~~~~~Dftnp~a~~w-w~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 113 ELYIG-RVWPGLSAFPDFTNPKVREW-WGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred CEEEE-EecCCCccccCCCChHHHHH-HHHHHHHHhhCCCceEeecCCC
Confidence 11000 0000 111 58899977665 5556666779999999999874
No 28
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.68 E-value=1.1e-07 Score=97.69 Aligned_cols=148 Identities=17% Similarity=0.213 Sum_probs=97.5
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-.|.|. | -|++.|++.++.+++.++|...+.||++|++...+ ..|
T Consensus 6 pP~walG~~~sr~~--y--~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~----------------------f~~- 58 (317)
T cd06600 6 PPMWALGYHISRYS--Y--YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL----------------------FTW- 58 (317)
T ss_pred CchHHHHHHhcCCC--C--CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc----------------------eee-
Confidence 45666677788877 2 37999999999999999999999999999864321 123
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCC--CCCCC-CcccccCCCCCCcccc
Q 011675 293 ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNI--PGLPE-KTTVVKPKLSPGLELT 369 (480)
Q Consensus 293 ~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~--~~~~~-~s~l~~p~~spg~~~~ 369 (480)
+.++||+ .+++|+++|++ | +| |.+|.-+. |.++. +.... ..+ -+....++ +
T Consensus 59 d~~~FPd--------------p~~~i~~l~~~-g-~k-~~~~~~P~-----i~~~~~~~~~~~~~~~-~~~v~~~~--g- 112 (317)
T cd06600 59 DPYRFPE--------------PKKLIDELHKR-N-VK-LVTIVDPG-----IRVDQNYSPFLSGMDK-GKFCEIES--G- 112 (317)
T ss_pred chhcCCC--------------HHHHHHHHHHC-C-CE-EEEEeecc-----ccCCCCChHHHHHHHC-CEEEECCC--C-
Confidence 4678994 57999999995 7 88 88995433 33321 11111 000 00011110 0
Q ss_pred cccccccceeccC----CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 370 MEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 370 ~pd~a~~~~~~~G----l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.|-+. .. ..| +++.+|+...+|.+.+...+.+.||||+|.|.+.
T Consensus 113 ~~~~~--~~-w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~E 160 (317)
T cd06600 113 ELFVG--KM-WPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNE 160 (317)
T ss_pred CeEEE--ee-cCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCC
Confidence 11110 11 122 5889998888887777777779999999999975
No 29
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.65 E-value=3.6e-07 Score=91.30 Aligned_cols=104 Identities=23% Similarity=0.394 Sum_probs=80.3
Q ss_pred cccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc-cCCCCCCCCC
Q 011675 224 TWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-ENFKFRDYVS 302 (480)
Q Consensus 224 TWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n~KFp~~~~ 302 (480)
.|-+-+...+++.|++.++.+++.++|...+.|||+|+...++ ..|+ +.++||+
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~----------------------f~~~~d~~~Fpd--- 67 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGD----------------------FTFDWDAGKFPN--- 67 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCce----------------------eeeecChhhCCC---
Confidence 3444444679999999999999999999999999999976542 1023 3578994
Q ss_pred CCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccC
Q 011675 303 PNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNG 382 (480)
Q Consensus 303 ~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~G 382 (480)
.+.+|++||++ | +| |.+| +.|..
T Consensus 68 -----------p~~~i~~l~~~-g-~~-~~~~---------~~P~v---------------------------------- 90 (265)
T cd06589 68 -----------PKSMIDELHDN-G-VK-LVLW---------IDPYI---------------------------------- 90 (265)
T ss_pred -----------HHHHHHHHHHC-C-CE-EEEE---------eChhH----------------------------------
Confidence 67999999994 7 87 8888 55530
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
..+|.+.+.+.+.+.||||+|.|.+..
T Consensus 91 --------~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 117 (265)
T cd06589 91 --------REWWAEVVKKLLVSLGVDGFWTDMGEP 117 (265)
T ss_pred --------HHHHHHHHHHhhccCCCCEEeccCCCC
Confidence 456666666667899999999999754
No 30
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.43 E-value=1.9e-06 Score=89.14 Aligned_cols=127 Identities=16% Similarity=0.159 Sum_probs=91.3
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-.|.|.- -|++.|++.++.+++.+||...+.||++|+...+ +|.
T Consensus 6 pP~WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~------------------------~Ft 57 (332)
T cd06601 6 KPRYALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYR------------------------TFT 57 (332)
T ss_pred CchHHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCC------------------------cee
Confidence 456666777888863 3899999999999999999999999999996432 244
Q ss_pred -cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccc
Q 011675 293 -ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTME 371 (480)
Q Consensus 293 -~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~p 371 (480)
+.++||+ .+++|++||++ | +| +.+| +.|... . ....| .+ +..
T Consensus 58 ~d~~~FPd--------------p~~mv~~L~~~-G-~k-lv~~---------i~P~i~---~--g~~~~--~~---~~~- 100 (332)
T cd06601 58 TNGGGFPN--------------PKEMFDNLHNK-G-LK-CSTN---------ITPVIS---Y--GGGLG--SP---GLY- 100 (332)
T ss_pred ecCCCCCC--------------HHHHHHHHHHC-C-Ce-EEEE---------ecCcee---c--CccCC--CC---cee-
Confidence 4578994 57999999995 7 87 6677 344321 0 00000 00 111
Q ss_pred cccccceeccCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 372 DLAVDKIVNNGVGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 372 d~a~~~~~~~Gl~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+..+|+. +.+|.++++.|.+.|||+++.|++.
T Consensus 101 -----------pDftnp~a-r~wW~~~~~~l~~~Gv~~~W~DmnE 133 (332)
T cd06601 101 -----------PDLGRPDV-REWWGNQYKYLFDIGLEFVWQDMTT 133 (332)
T ss_pred -----------eCCCCHHH-HHHHHHHHHHHHhCCCceeecCCCC
Confidence 25678865 4567888889999999999999863
No 31
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=98.43 E-value=6.7e-07 Score=92.51 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=94.8
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
+|.+.-++-+|.|.. -|++.|++.++.+++.++|...+.||++|+...++ ..|
T Consensus 6 pP~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~----------------------f~~- 58 (339)
T cd06603 6 PPLFSLGYHQCRWNY----KDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRY----------------------FTW- 58 (339)
T ss_pred CchHHHHHHhcCCCC----CCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCc----------------------eEe-
Confidence 556777777887762 47999999999999999999999999999854321 123
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCC--CCCCCCCccccc-CCCCCCcccc
Q 011675 293 ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPN--IPGLPEKTTVVK-PKLSPGLELT 369 (480)
Q Consensus 293 ~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~--~~~~~~~s~l~~-p~~spg~~~~ 369 (480)
+.+|||+ .+.+|++||++ | +| |.+|.-+. |.++ .+..+.-.+.-+ .+...|
T Consensus 59 d~~~FPd--------------p~~mi~~L~~~-G-~k-~~~~~~P~-----v~~~~~~~~y~e~~~~g~~vk~~~g---- 112 (339)
T cd06603 59 DKKKFPD--------------PEKMQEKLASK-G-RK-LVTIVDPH-----IKRDDGYYVYKEAKDKGYLVKNSDG---- 112 (339)
T ss_pred CcccCCC--------------HHHHHHHHHHC-C-CE-EEEEecCc-----eecCCCCHHHHHHHHCCeEEECCCC----
Confidence 4689994 57999999995 7 98 88994332 3222 111010000001 011111
Q ss_pred cccccccceeccC----CCCCCHHHHHHHHHHHHHHHh--hcCCCEEEEcCcc
Q 011675 370 MEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLE--KVGIDGVKVDVIH 416 (480)
Q Consensus 370 ~pd~a~~~~~~~G----l~lv~P~~v~~fyd~l~~~La--~~GVDgVKvD~q~ 416 (480)
.+ .. .. ...| +++.+|+...+|.+.+...+. +.||||++.|.+.
T Consensus 113 ~~-~~-~~-~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 113 GD-FE-GW-CWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred CE-EE-EE-ECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 01 00 01 1122 488899888777776666665 5799999999864
No 32
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.36 E-value=2e-05 Score=89.79 Aligned_cols=201 Identities=21% Similarity=0.302 Sum_probs=125.1
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEE
Q 011675 177 SVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLI 256 (480)
Q Consensus 177 ~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lII 256 (480)
.-.||-+|++|-++++.-... .| + +.-+|.|. || |.|-..+..-+|+.|.+.++..++..||...+.+
T Consensus 234 ldyyv~~G~~~~~vi~~yt~l----TG--k---p~l~P~Wa--~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~l 301 (772)
T COG1501 234 LDYYVIAGPTPKDVLEKYTDL----TG--K---PPLPPKWA--LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVL 301 (772)
T ss_pred EEEEEEeCCCHHHHHHHHHHh----hC--C---CCCCCcee--cC-CCceeccccccHHHHHHHHhhcccccCcceEEEE
Confidence 446888999985554443333 22 1 22345554 45 7788888888999999999999999999999999
Q ss_pred cCC-cCcccCCCCCCCcccccccccCCcCCccccCcc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEe
Q 011675 257 DDG-WQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVW 334 (480)
Q Consensus 257 DDG-WQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vW 334 (480)
|=. |-+. |..|+ +..+||+ .+.|++++|++ | +| +-+|
T Consensus 302 D~~~~~~~------------------------~~~F~wd~~~FP~--------------pk~mi~~l~~~-G-ik-l~~~ 340 (772)
T COG1501 302 DIDFWMDN------------------------WGDFTWDPDRFPD--------------PKQMIAELHEK-G-IK-LIVI 340 (772)
T ss_pred eehhhhcc------------------------ccceEECcccCCC--------------HHHHHHHHHhc-C-ce-EEEE
Confidence 975 5541 34466 4589995 46999999996 7 99 7788
Q ss_pred eeccCCCCCCCCCCCCCCCCcccccCCCCCCccccccc---ccccceeccC--CCCCCHHHHHHHHHHHHHHHhhcCCCE
Q 011675 335 HALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMED---LAVDKIVNNG--VGFVPPELVDQMYEGLHSHLEKVGIDG 409 (480)
Q Consensus 335 HAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd---~a~~~~~~~G--l~lv~P~~v~~fyd~l~~~La~~GVDg 409 (480)
|.|... .++.+..-..+.|..-..|+ +-++.+...+ ++.+||+...+|.+..+..|.+.|||+
T Consensus 341 ---------i~P~i~---~d~~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g 408 (772)
T COG1501 341 ---------INPYIK---QDSPLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDG 408 (772)
T ss_pred ---------eccccc---cCCchHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccE
Confidence 444321 11111000011121111111 1122222122 488899887777778889999999999
Q ss_pred EEEcCcchhhhhh--ccCCChh---------HHHHHHHHHHHHH
Q 011675 410 VKVDVIHLLEILC--ENYGGRV---------DLAKAYYKALTAS 442 (480)
Q Consensus 410 VKvD~q~~l~~l~--~~~ggrv---------~l~~ay~~AL~~s 442 (480)
++.|++.-.-..+ .+.+... -.++++++|+++.
T Consensus 409 ~W~D~nEp~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~ 452 (772)
T COG1501 409 FWNDMNEPEPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKEL 452 (772)
T ss_pred EEccCCCCccccccccccccCHHHHhcchhHHHHHHHHHHHHhh
Confidence 9999985432211 1122222 4456777777644
No 33
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=98.34 E-value=3.2e-05 Score=89.47 Aligned_cols=202 Identities=16% Similarity=0.237 Sum_probs=119.8
Q ss_pred cEEEEeEeecCCeEEEeccCCCCcEEEEEeeCCceeeccccceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 011675 135 PYVLLLPIVEGPFRASLQPGADDYVDVCVESGSTKVTGDSFRSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPP 214 (480)
Q Consensus 135 ~y~v~Lpl~~g~fra~L~~~~~~~l~l~~esg~~~v~~~~~~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P 214 (480)
.|.|| .++..++.+.-+....+.+. +... -..++...|.+|-++|++...+. +. ..-+|
T Consensus 126 ~yGVf---~dns~~~~fDlg~~~~~~f~--a~~~-------y~~i~~G~gptp~eVi~~Yt~LT----Gr-----p~mpP 184 (978)
T PLN02763 126 ALGVL---ADTTRRCEIDLRKESIIRII--APAS-------YPVITFGPFPSPEALLTSLSHAI----GT-----VFMPP 184 (978)
T ss_pred EEEEE---EeCCCcEEEEEcCCceEEEE--ecCc-------eEEEEecCCCCHHHHHHHHHHHh----CC-----CCCCc
Confidence 57665 46666666643333332232 2211 12222344578888887766653 21 23356
Q ss_pred ccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc-c
Q 011675 215 PIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-E 293 (480)
Q Consensus 215 ~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~ 293 (480)
.|.-++-+|.|.. -+++.|++.++.+++.+||...+.||..|.... ..|. +
T Consensus 185 ~WALGy~qSR~~Y----~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~------------------------~~FTwD 236 (978)
T PLN02763 185 KWALGYQQCRWSY----ESAKRVAEIARTFREKKIPCDVVWMDIDYMDGF------------------------RCFTFD 236 (978)
T ss_pred hHHhheeeccCCC----CCHHHHHHHHHHHHHcCCCceEEEEehhhhcCC------------------------CceeEC
Confidence 7777788898872 378999999999999999999999999997532 2244 3
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-Cccc---ccCCCCCCcccc
Q 011675 294 NFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTV---VKPKLSPGLELT 369 (480)
Q Consensus 294 n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l---~~p~~spg~~~~ 369 (480)
.++||+ .++|++++|++ | +| + ||..-. ||..+. +... +..+ .+.+...|
T Consensus 237 ~~rFPd--------------P~~mv~~Lh~~-G-~k-v-v~iidP----gI~~d~-gY~~y~eg~~~~~fvk~~~G---- 289 (978)
T PLN02763 237 KERFPD--------------PKGLADDLHSI-G-FK-A-IWMLDP----GIKAEE-GYFVYDSGCENDVWIQTADG---- 289 (978)
T ss_pred cccCCC--------------HHHHHHHHHHC-C-CE-E-EEEEcC----CCccCC-CCHHHHhHhhcCeeEECCCC----
Confidence 579994 57999999995 7 88 3 442111 233211 0000 0000 00000001
Q ss_pred cccccccceeccC----CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 370 MEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 370 ~pd~a~~~~~~~G----l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.|-+ .. ...| .++.+|+. +.+|.++++.|.+.||||++.|++.
T Consensus 290 ~~y~--G~-vWpG~~~fpDFTnP~a-r~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 290 KPFV--GE-VWPGPCVFPDFTNKKT-RSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred CeeE--ee-ecCCCccccCCCCHHH-HHHHHHHHHHHhcCCCcEEEccCCC
Confidence 0100 01 1122 37788854 5577888888989999999999974
No 34
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=98.12 E-value=3.4e-05 Score=77.90 Aligned_cols=126 Identities=17% Similarity=0.277 Sum_probs=77.4
Q ss_pred ccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCC
Q 011675 225 WDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPN 304 (480)
Q Consensus 225 Wdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~ 304 (480)
+..|....|-+..++.++-.++.|++ +++||+||..-..+.. .++. +.-|.
T Consensus 22 ~~~~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~--------------------~d~~--~~~~~----- 72 (273)
T PF10566_consen 22 GVGFKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD--------------------FDFT--KPIPD----- 72 (273)
T ss_dssp SBSS-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT----------------------TT---B-TT-----
T ss_pred CCCCcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc--------------------cccc--ccCCc-----
Confidence 34455678999999999999999999 9999999997322211 1121 12221
Q ss_pred CCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccCCC
Q 011675 305 GGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVG 384 (480)
Q Consensus 305 ~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~ 384 (480)
..|+.+|++.|+| | |+ |-||---.++|+. . .
T Consensus 73 -------~dl~elv~Ya~~K-g-Vg-i~lw~~~~~~~~~---------------------------~------------~ 103 (273)
T PF10566_consen 73 -------FDLPELVDYAKEK-G-VG-IWLWYHSETGGNV---------------------------A------------N 103 (273)
T ss_dssp ---------HHHHHHHHHHT-T--E-EEEEEECCHTTBH---------------------------H------------H
T ss_pred -------cCHHHHHHHHHHc-C-CC-EEEEEeCCcchhh---------------------------H------------h
Confidence 3799999999997 7 66 6677110000000 0 0
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHH
Q 011675 385 FVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASV 443 (480)
Q Consensus 385 lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~ 443 (480)
+ +. + .++..+.++++||.|||+|.-. . ...+..+-|++.++++.
T Consensus 104 ~---~~-~--~~~~f~~~~~~Gv~GvKidF~~------~---d~Q~~v~~y~~i~~~AA 147 (273)
T PF10566_consen 104 L---EK-Q--LDEAFKLYAKWGVKGVKIDFMD------R---DDQEMVNWYEDILEDAA 147 (273)
T ss_dssp H---HC-C--HHHHHHHHHHCTEEEEEEE--S------S---TSHHHHHHHHHHHHHHH
T ss_pred H---HH-H--HHHHHHHHHHcCCCEEeeCcCC------C---CCHHHHHHHHHHHHHHH
Confidence 0 11 1 2677788999999999999932 1 34466778888888664
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.0013 Score=74.40 Aligned_cols=173 Identities=20% Similarity=0.346 Sum_probs=115.8
Q ss_pred eEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEE
Q 011675 177 SVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLI 256 (480)
Q Consensus 177 ~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lII 256 (480)
.-+|+=.|..|..+++|..+.+-+ +-..|-|-=++--|-|. -.+.+.|++.++...+.|+|.....+
T Consensus 266 lD~y~flGptPe~vvqQy~q~iG~---------P~m~pYWslGf~~~Rwg----Y~nls~~~dvv~~~~~agiPld~~~~ 332 (805)
T KOG1065|consen 266 LDFYVFLGPTPEGVVQQYLQLIGR---------PAMPPYWSLGFQLCRWG----YKNLSVVRDVVENYRAAGIPLDVIVI 332 (805)
T ss_pred EEEEEecCCChHHHHHHHHHHhCC---------ccCCchhhccceecccc----cccHHHHHHHHHHHHHcCCCcceeee
Confidence 345666778899999988876532 22345566666677776 45788899999999999999999999
Q ss_pred cCCcCcccCCCCCCCcccccccccCCcCCccccCcc-cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCccEEEEee
Q 011675 257 DDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ-ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWH 335 (480)
Q Consensus 257 DDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~-~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWH 335 (480)
|+-|++..+| |. +..+|| +|+.+|++||+ .| +|+| +|.
T Consensus 333 DiDyMd~ykD------------------------FTvd~~~fp--------------~~~~fv~~Lh~-~G-~kyv-lii 371 (805)
T KOG1065|consen 333 DIDYMDGYKD------------------------FTVDKVWFP--------------DLKDFVDDLHA-RG-FKYV-LII 371 (805)
T ss_pred ehhhhhcccc------------------------eeeccccCc--------------chHHHHHHHHh-CC-CeEE-EEe
Confidence 9999987654 55 347898 59999999999 47 9966 552
Q ss_pred eccCCCCCCCCCCC------CCCCCcccccCCCCCCcccccccccccceeccC----CCCCCHHHHHHHHHHHHHHHhhc
Q 011675 336 ALCGYWGGLRPNIP------GLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNG----VGFVPPELVDQMYEGLHSHLEKV 405 (480)
Q Consensus 336 Al~GYWgGv~P~~~------~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~G----l~lv~P~~v~~fyd~l~~~La~~ 405 (480)
-++ |.-+.. +++++.-+... .| ++. .+...+ .| .+.++|+.+.++-+++..+-...
T Consensus 372 dP~-----is~~~~y~~y~~g~~~~v~I~~~---~g----~~~-~lg~vw-P~~~~fpDftnp~~~~Ww~~~~~~fh~~v 437 (805)
T KOG1065|consen 372 DPF-----ISTNSSYGPYDRGVAKDVLIKNR---EG----SPK-MLGEVW-PGSTAFPDFTNPAVVEWWLDELKRFHDEV 437 (805)
T ss_pred CCc-----cccCccchhhhhhhhhceeeecc---cC----chh-hhcccC-CCcccccccCCchHHHHHHHHHHhhcccC
Confidence 111 222221 11111111111 11 111 111111 12 36789999999999998888899
Q ss_pred CCCEEEEcCcch
Q 011675 406 GIDGVKVDVIHL 417 (480)
Q Consensus 406 GVDgVKvD~q~~ 417 (480)
++||++.|+...
T Consensus 438 p~dg~wiDmnE~ 449 (805)
T KOG1065|consen 438 PFDGFWIDMNEP 449 (805)
T ss_pred CccceEEECCCc
Confidence 999999999755
No 36
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=92.19 E-value=5.2 Score=45.11 Aligned_cols=141 Identities=15% Similarity=0.130 Sum_probs=71.1
Q ss_pred cCHHHHHHHH-HHHHhCCCCCcEEEE-cCCcCcccCCCCCCCcccccccccCCcCCccccC-cccCCCCCCCCCCCCCCC
Q 011675 232 VQPHGVMEGV-KGLVDGGCPPGLVLI-DDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLR-YQENFKFRDYVSPNGGDS 308 (480)
Q Consensus 232 vt~~~I~~~l-~~L~~~G~~~~~lII-DDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~-~~~n~KFp~~~~~~~~~~ 308 (480)
-|-.+|.+.+ +-|++.|+. .|.| --..+..... -|.+ -.+ +..+.+|.+.
T Consensus 153 g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~-------------wGY~----~~~y~~~~~~~Gt~-------- 205 (613)
T TIGR01515 153 LSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGS-------------WGYQ----VTGYYAPTSRFGTP-------- 205 (613)
T ss_pred CCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCC-------------CCCC----cccCcccccccCCH--------
Confidence 5678888875 999999998 4443 1111110000 0000 011 2234566532
Q ss_pred CCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCC
Q 011675 309 SDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVP 387 (480)
Q Consensus 309 ~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~ 387 (480)
..||.||+++|++ | |+ |-+.-.+.= +.++...+.. +..-.|....+ .....+.| +. .-++.-+
T Consensus 206 ---~dlk~lV~~~H~~-G-i~-VilD~V~NH----~~~~~~~~~~~~~~~~y~~~~~-~~~~~~~w--~~---~~~~~~~ 269 (613)
T TIGR01515 206 ---DDFMYFVDACHQA-G-IG-VILDWVPGH----FPKDDHGLAEFDGTPLYEHKDP-RDGEHWDW--GT---LIFDYGR 269 (613)
T ss_pred ---HHHHHHHHHHHHC-C-CE-EEEEecccC----cCCccchhhccCCCcceeccCC-ccCcCCCC--CC---ceecCCC
Confidence 5899999999995 8 98 777733220 1111111111 10000100000 00111111 11 1135567
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEcCc
Q 011675 388 PELVDQMYEGLHSHLEKVGIDGVKVDVI 415 (480)
Q Consensus 388 P~~v~~fyd~l~~~La~~GVDgVKvD~q 415 (480)
|+..+.+.+.+.-.+.+.||||+.+|+-
T Consensus 270 ~~Vr~~l~~~~~~W~~ey~iDG~R~D~v 297 (613)
T TIGR01515 270 PEVRNFLVANALYWAEFYHIDGLRVDAV 297 (613)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCH
Confidence 7665666666666677899999999984
No 37
>PRK12568 glycogen branching enzyme; Provisional
Probab=87.77 E-value=16 Score=42.13 Aligned_cols=73 Identities=26% Similarity=0.440 Sum_probs=46.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc-hhhh---------hhccCCChhHH-HHHHHHHHHHHHHhccCCCc
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH-LLEI---------LCENYGGRVDL-AKAYYKALTASVRKHFKGNG 451 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~-~l~~---------l~~~~ggrv~l-~~ay~~AL~~s~~~~F~~~~ 451 (480)
+++-+|+....+.+.+.-.|.+.||||+-+|+-. ++.. +...+|++..+ +..+.+-|...+.+.+|+.-
T Consensus 378 ~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~ 457 (730)
T PRK12568 378 YNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVL 457 (730)
T ss_pred cccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeE
Confidence 3667887777778877788889999999999743 3310 11123444332 33466667777888888754
Q ss_pred eEee
Q 011675 452 VIAS 455 (480)
Q Consensus 452 iI~C 455 (480)
+|+=
T Consensus 458 ~IAE 461 (730)
T PRK12568 458 TIAE 461 (730)
T ss_pred EEEE
Confidence 4443
No 38
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=86.75 E-value=6.9 Score=40.72 Aligned_cols=155 Identities=17% Similarity=0.175 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEc----CCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCCCCC
Q 011675 233 QPHGVMEGVKGLVDGGCPPGLVLID----DGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDS 308 (480)
Q Consensus 233 t~~~I~~~l~~L~~~G~~~~~lIID----DGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~ 308 (480)
+++.+.+.++.+++.++. .++|| +|.-.... +.|. .....+..++
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s--~~~~----------------~~~~ga~~~~----------- 59 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDS--QVPL----------------AREIGAVKPY----------- 59 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecC--CCch----------------hhhccccccc-----------
Confidence 568899999999999999 99997 11111100 0000 0001112222
Q ss_pred CCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccc----ee--ccC
Q 011675 309 SDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDK----IV--NNG 382 (480)
Q Consensus 309 ~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~----~~--~~G 382 (480)
...++.+++.+|++ | |- +=-|...+ - ++.+ ...+|+++... ++ ..|
T Consensus 60 --i~D~~~l~~~l~e~-g-IY-~IARIv~F-------k-------D~~l---------a~~~pe~av~~~~G~~w~d~~~ 111 (316)
T PF13200_consen 60 --IKDLKALVKKLKEH-G-IY-PIARIVVF-------K-------DPVL---------AEAHPEWAVKTKDGSVWRDNEG 111 (316)
T ss_pred --ccCHHHHHHHHHHC-C-CE-EEEEEEEe-------c-------ChHH---------hhhChhhEEECCCCCcccCCCC
Confidence 24899999999994 7 53 32332211 1 1111 12345555411 12 134
Q ss_pred CCCCCH--HHHHHHHHHHHHHHhhcCCCEEEEcCcchhh-----hhhccC---C-ChhHHHHHHHHHHHHHHHhc
Q 011675 383 VGFVPP--ELVDQMYEGLHSHLEKVGIDGVKVDVIHLLE-----ILCENY---G-GRVDLAKAYYKALTASVRKH 446 (480)
Q Consensus 383 l~lv~P--~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~-----~l~~~~---g-grv~l~~ay~~AL~~s~~~~ 446 (480)
..-+|| +.+..+--++-..+++.|||-|-+|-..+=+ .+.-.. . .|++....+.+...+.++.+
T Consensus 112 ~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~~~~~~~l~y~~~~~~~~r~~aI~~Fl~~a~~~l~~~ 186 (316)
T PF13200_consen 112 EAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIRFPDEGRLSGLDYSENDTEESRVDAITDFLAYAREELHPY 186 (316)
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeeeeecCCCCcccccccCCCCCcchHHHHHHHHHHHHHHHHhHc
Confidence 556777 7888888899999999999999999865533 111111 1 26666666655555555433
No 39
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=80.03 E-value=13 Score=42.26 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=55.4
Q ss_pred CCCcHHHHHHHHHhhcCCccEEEEe-eeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCC-
Q 011675 310 DNKGMGAFIRDLKDEFKTVDQVYVW-HALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFV- 386 (480)
Q Consensus 310 ~~~GLk~~V~~ik~~~g~lk~V~vW-HAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv- 386 (480)
.|++||++|+..|+ .| |--+-=| ++= +.|++..+.. +....+....|. .+.+++|- ..+.-.
T Consensus 212 tPedfk~fVD~aH~-~G-IgViLD~V~~H------F~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg------~~i~~~g 276 (628)
T COG0296 212 TPEDFKALVDAAHQ-AG-IGVILDWVPNH------FPPDGNYLARFDGTFLYEHEDPR-RGEHTDWG------TAIFNYG 276 (628)
T ss_pred CHHHHHHHHHHHHH-cC-CEEEEEecCCc------CCCCcchhhhcCCccccccCCcc-cccCCCcc------cchhccC
Confidence 34699999999999 47 6533335 122 2254444444 333332222222 33444432 222222
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhh
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEIL 421 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l 421 (480)
.+|...-|.....-.|.+..|||+-||+-+.+-++
T Consensus 277 r~EVR~Fll~nal~Wl~~yHiDGlRvDAV~smly~ 311 (628)
T COG0296 277 RNEVRNFLLANALYWLEEYHIDGLRVDAVASMLYL 311 (628)
T ss_pred cHHHHHHHHHHHHHHHHHhCCcceeeehhhhhhcc
Confidence 45555555777778889999999999997654433
No 40
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=79.87 E-value=47 Score=34.52 Aligned_cols=169 Identities=19% Similarity=0.351 Sum_probs=85.2
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCCCCCCCC
Q 011675 232 VQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDN 311 (480)
Q Consensus 232 vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~~~~ 311 (480)
++++...+.....+++|+- .+|+..- . +... |..+...+.-+. .+..
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~-~-v~~~--------------~~~~~~~~~i~~-d~~i-------------- 79 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEAT-A-VSPE--------------GRGFPGQPGIWD-DEQI-------------- 79 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEE-E-SSGG--------------GSSSTTSEBSSS-HHHH--------------
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEeccc-c-cccc--------------cccccccchhch-hhHH--------------
Confidence 7788999999999999985 6666431 1 1111 011111121111 1222
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccCCCCCCHHHH
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELV 391 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v 391 (480)
.|+|.+++.||+ +|..=.+=+||+ |.+.. |.. ..... .-|.....+..... .+.... --...+++
T Consensus 80 ~~~k~l~~~vh~-~Ga~i~~QL~H~--G~~~~--~~~---~~~~~-~~psa~~~~~~~~~--~~~~~~----~~mt~~eI 144 (341)
T PF00724_consen 80 PGLKKLADAVHA-HGAKIIAQLWHA--GRQAN--PEY---SGDPP-VGPSAPSALPSPIK--FMGYPP----REMTEEEI 144 (341)
T ss_dssp HHHHHHHHHHHH-TTSEEEEEEE----GGGSS--GCC---SGGGC-EESSCSSSSSTTTT--ETSCEE----EE--HHHH
T ss_pred HHHHHHHHHHHh-cCccceeecccc--ccccC--ccc---CCCCc-cCcccccccCcccc--cCCCCC----eeCCHHHH
Confidence 399999999999 573434557996 44443 111 00000 00100000000000 000000 01234677
Q ss_pred HHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhhc--------cCCC----hhHHHHHHHHHHHHHHHhccC
Q 011675 392 DQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILCE--------NYGG----RVDLAKAYYKALTASVRKHFK 448 (480)
Q Consensus 392 ~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~~--------~~gg----rv~l~~ay~~AL~~s~~~~F~ 448 (480)
.+.-++|- +...++|+|||-+-+.+ +++.+-. .||| |..+.....+|+.+.+-..|+
T Consensus 145 ~~ii~~f~~AA~~A~~AGfDGVEIH~ahGyLl~qFLSp~~N~RtDeYGGs~ENR~Rf~~Eii~aIr~~vg~d~~ 218 (341)
T PF00724_consen 145 EEIIEDFAQAARRAKEAGFDGVEIHAAHGYLLSQFLSPLTNRRTDEYGGSLENRARFLLEIIEAIREAVGPDFP 218 (341)
T ss_dssp HHHHHHHHHHHHHHHHTT-SEEEEEESTTSHHHHHHSTTT---SSTTSSSHHHHHHHHHHHHHHHHHHHTGGGE
T ss_pred HHHHHHHHHHHHHHHHhccCeEeecccchhhhhheeeeccCCCchhhhhhhchhhHHHHHHHHHHHHHhcCCce
Confidence 77766664 55668999999999855 3332211 4554 667777777777777766664
No 41
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=78.36 E-value=7.6 Score=39.35 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=27.2
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcc
Q 011675 232 VQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSI 263 (480)
Q Consensus 232 vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~ 263 (480)
-++..+.+.++.-++..+|.+|+|-+||.+..
T Consensus 42 ~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~ 73 (261)
T cd06596 42 STTDDARKVADKYKENDMPLGWMLPNDGYGCG 73 (261)
T ss_pred cchhhHHHHHHHHHhcCCCceeeccCCCCcch
Confidence 34566888899999999999999999998864
No 42
>PRK12313 glycogen branching enzyme; Provisional
Probab=77.75 E-value=67 Score=36.38 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=25.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCc
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVI 415 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q 415 (480)
++.-+|+..+.+.+.+.-.+.+.||||+-+|+-
T Consensus 279 ~n~~~~~vr~~l~~~~~~W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 279 FDLGKNEVRSFLISSALFWLDEYHLDGLRVDAV 311 (633)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCh
Confidence 456678776777777777777899999999964
No 43
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=77.62 E-value=59 Score=33.98 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=21.2
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWG 342 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWg 342 (480)
.+|+.+++.+|+ +|..=.+=+||+ |+++
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~Ql~H~--G~~~ 104 (343)
T cd04734 77 PGFRRLAEAVHA-HGAVIMIQLTHL--GRRG 104 (343)
T ss_pred HHHHHHHHHHHh-cCCeEEEeccCC--CcCc
Confidence 399999999999 674446678885 6554
No 44
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=74.66 E-value=38 Score=35.03 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=20.7
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWG 342 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWg 342 (480)
.+|+.+++.+|+ +|..=.+=+||+ |.++
T Consensus 77 ~~~~~l~~~vh~-~G~~~~~QL~H~--G~~~ 104 (336)
T cd02932 77 EALKRIVDFIHS-QGAKIGIQLAHA--GRKA 104 (336)
T ss_pred HHHHHHHHHHHh-cCCcEEEEccCC--CcCC
Confidence 389999999999 673336778994 5543
No 45
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=73.65 E-value=21 Score=35.84 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 390 LVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 390 ~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
-+..|.+.+.+++..+|+|||-+|...
T Consensus 97 ~~~~fv~S~~~~l~~~~fDGiDiDwE~ 123 (253)
T cd06544 97 WVSNAVSSLTSIIQTYNLDGIDIDYEH 123 (253)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeeccc
Confidence 457789999999999999999999964
No 46
>PRK14705 glycogen branching enzyme; Provisional
Probab=72.71 E-value=23 Score=43.25 Aligned_cols=128 Identities=21% Similarity=0.365 Sum_probs=67.9
Q ss_pred CcHHHHHHHHHhhcCCccEEEEe---eeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVW---HALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVP 387 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vW---HAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~ 387 (480)
++||.+|+++|++ | |+-|.=| |...-.|+ ... +..-.|--..+ -.+.+++|- ... +++-+
T Consensus 815 ~dfk~lVd~~H~~-G-I~VILD~V~nH~~~d~~~--------l~~fdg~~~y~~~d~-~~g~~~~Wg--~~~---fn~~~ 878 (1224)
T PRK14705 815 DEFRFLVDSLHQA-G-IGVLLDWVPAHFPKDSWA--------LAQFDGQPLYEHADP-ALGEHPDWG--TLI---FDFGR 878 (1224)
T ss_pred HHHHHHHHHHHHC-C-CEEEEEeccccCCcchhh--------hhhcCCCcccccCCc-ccCCCCCCC--Cce---ecCCC
Confidence 5899999999995 7 8855555 32211121 111 11000100011 012344431 111 35556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhh----------hccCCChhHH-HHHHHHHHHHHHHhccCCCceEee
Q 011675 388 PELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEIL----------CENYGGRVDL-AKAYYKALTASVRKHFKGNGVIAS 455 (480)
Q Consensus 388 P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l----------~~~~ggrv~l-~~ay~~AL~~s~~~~F~~~~iI~C 455 (480)
|+....+.+.+.-.|.+.+|||+-+|+-..+-++ ...+||+..+ +-.+.+-|.+.+.+.+|+.-+|+=
T Consensus 879 ~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 879 TEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 7666666677777778899999999994332121 1234554422 334555566667777886544443
No 47
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=72.54 E-value=50 Score=34.11 Aligned_cols=23 Identities=17% Similarity=0.262 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEc
Q 011675 233 QPHGVMEGVKGLVDGGCPPGLVLID 257 (480)
Q Consensus 233 t~~~I~~~l~~L~~~G~~~~~lIID 257 (480)
+++.+.+.++.|++.|+. .|+++
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~q 39 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQ 39 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEE
Confidence 899999999999999987 66664
No 48
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=70.14 E-value=53 Score=36.65 Aligned_cols=35 Identities=20% Similarity=0.537 Sum_probs=24.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l 418 (480)
+..-+|+....++ +..+++.+.||||+-+|+-..+
T Consensus 171 Ln~~np~V~~~l~-~~~~~W~~~GvDGfRlDa~~~i 205 (551)
T PRK10933 171 LNWENPAVRAELK-KVCEFWADRGVDGLRLDVVNLI 205 (551)
T ss_pred cCCCCHHHHHHHH-HHHHHHHHCCCcEEEEcchhhc
Confidence 4566786555555 5555656899999999986554
No 49
>PLN00196 alpha-amylase; Provisional
Probab=66.90 E-value=1.3e+02 Score=32.55 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=28.4
Q ss_pred CccccccccccccccccccCHHHHHHHHHHHHhCCCC
Q 011675 214 PPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCP 250 (480)
Q Consensus 214 P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~ 250 (480)
..++..|=|.+|..-+. .-.+|.+.|+.|++.|+.
T Consensus 25 ~v~~Q~F~W~~~~~~gg--~~~~i~~kldyL~~LGvt 59 (428)
T PLN00196 25 QVLFQGFNWESWKQNGG--WYNFLMGKVDDIAAAGIT 59 (428)
T ss_pred CEEEEeeccCCCCCCCc--CHHHHHHHHHHHHHcCCC
Confidence 47889999999876332 357799999999999987
No 50
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=66.78 E-value=54 Score=34.25 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=20.6
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWG 342 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWg 342 (480)
.||+.+++.+|+ +|..=.+=+||+ |.+.
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~QL~h~--G~~~ 104 (353)
T cd02930 77 AGHRLITDAVHA-EGGKIALQILHA--GRYA 104 (353)
T ss_pred HHHHHHHHHHHH-cCCEEEeeccCC--CCCC
Confidence 499999999999 573435678885 5443
No 51
>PRK14706 glycogen branching enzyme; Provisional
Probab=64.92 E-value=57 Score=37.21 Aligned_cols=72 Identities=25% Similarity=0.303 Sum_probs=46.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhh--------hccCCChhH-HHHHHHHHHHHHHHhccCCCceE
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEIL--------CENYGGRVD-LAKAYYKALTASVRKHFKGNGVI 453 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l--------~~~~ggrv~-l~~ay~~AL~~s~~~~F~~~~iI 453 (480)
+++-+|+..+.+.+.+.-.+.+.+|||+-+|+-..+-++ ...+|++.. -+-.+.+.|...+.+.+|+.-+|
T Consensus 276 ~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~i 355 (639)
T PRK14706 276 FDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMMI 355 (639)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 456677666666677777778999999999974432111 122445442 34567777777787878865444
Q ss_pred e
Q 011675 454 A 454 (480)
Q Consensus 454 ~ 454 (480)
+
T Consensus 356 A 356 (639)
T PRK14706 356 A 356 (639)
T ss_pred E
Confidence 4
No 52
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=63.73 E-value=45 Score=33.96 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+|+....|-+.+-+++.++|+|||=+|...
T Consensus 88 ~~~~~R~~fi~siv~~l~~~~fDGidiDWE~ 118 (299)
T cd02879 88 SDPTARKAFINSSIKVARKYGFDGLDLDWEF 118 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCceeecccC
Confidence 4677889999999999999999999999854
No 53
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=62.57 E-value=66 Score=37.52 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhh------------ccCCChh-HHHHHHHHHHHHHHHhccCC
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILC------------ENYGGRV-DLAKAYYKALTASVRKHFKG 449 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~------------~~~ggrv-~l~~ay~~AL~~s~~~~F~~ 449 (480)
+++-+|+....+.+.+.-.+.+.+|||+.+|+-..+-++. ..+|+++ .-+-.|.+-+...+.+.+|+
T Consensus 360 ~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~ 439 (758)
T PLN02447 360 FNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPE 439 (758)
T ss_pred ecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCC
Confidence 3556776655556666666678999999999865443321 1133333 23445777777778888885
Q ss_pred C
Q 011675 450 N 450 (480)
Q Consensus 450 ~ 450 (480)
.
T Consensus 440 ~ 440 (758)
T PLN02447 440 A 440 (758)
T ss_pred e
Confidence 3
No 54
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=62.39 E-value=1.8e+02 Score=30.40 Aligned_cols=107 Identities=16% Similarity=0.245 Sum_probs=56.5
Q ss_pred cHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccCCCCCCHHHH
Q 011675 313 GMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELV 391 (480)
Q Consensus 313 GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v 391 (480)
+++.+++.+|+ +|..=.+=+||+ |.+... . .... -+.+..+ .....| . -...+++
T Consensus 82 ~~r~l~d~vh~-~G~~i~~QL~H~--G~~~~~--~--~~~~~ps~~~~~-----~~~~~p---------~---~mt~eeI 137 (337)
T PRK13523 82 GLHKLVTFIHD-HGAKAAIQLAHA--GRKAEL--E--GDIVAPSAIPFD-----EKSKTP---------V---EMTKEQI 137 (337)
T ss_pred HHHHHHHHHHh-cCCEEEEEccCC--CCCCCC--C--CCccCCCCCCCC-----CCCCCC---------C---cCCHHHH
Confidence 89999999999 674435667885 544321 0 0000 0111000 000011 1 1224666
Q ss_pred HHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhh-h-------ccCCC----hhHHHHHHHHHHHHHH
Q 011675 392 DQMYEGLH---SHLEKVGIDGVKVDVIH--LLEIL-C-------ENYGG----RVDLAKAYYKALTASV 443 (480)
Q Consensus 392 ~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l-~-------~~~gg----rv~l~~ay~~AL~~s~ 443 (480)
.++-++|- +.+.++|+|+|-+-+.+ +++.+ . ..||| |..+.....+++.+.+
T Consensus 138 ~~ii~~f~~aA~~a~~aGfDgVeih~ahGyLl~qFlSp~~N~RtD~yGGslenR~Rf~~eii~~ir~~~ 206 (337)
T PRK13523 138 KETVLAFKQAAVRAKEAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDAVKEVW 206 (337)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCcCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 66666664 56678999999998764 22221 1 13454 5566666666666554
No 55
>PRK05402 glycogen branching enzyme; Provisional
Probab=61.75 E-value=3e+02 Score=31.93 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=27.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcC-cchh
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDV-IHLL 418 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~-q~~l 418 (480)
+++-+|+..+.+.+.+.-.+.+.||||+-+|+ .+++
T Consensus 374 ~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v~~~~ 410 (726)
T PRK05402 374 FNYGRNEVRNFLVANALYWLEEFHIDGLRVDAVASML 410 (726)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCHHHhh
Confidence 35667877677777777777789999999996 3443
No 56
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=60.80 E-value=2.5e+02 Score=31.40 Aligned_cols=35 Identities=23% Similarity=0.469 Sum_probs=25.6
Q ss_pred CCCCCH---HHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 383 VGFVPP---ELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 383 l~lv~P---~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
+.+-+| +....+.+.+.-.+.+.||||+-+|+-..
T Consensus 211 ~n~~~~~~~~vr~~i~~~~~~W~~e~~iDGfR~D~~~~ 248 (542)
T TIGR02402 211 INFDGPGSDEVRRYILDNALYWLREYHFDGLRLDAVHA 248 (542)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHhCCcEEEEeCHHH
Confidence 455666 55556677777777789999999998543
No 57
>PLN02784 alpha-amylase
Probab=59.94 E-value=2.2e+02 Score=33.83 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=47.0
Q ss_pred ccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccC
Q 011675 215 PIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQEN 294 (480)
Q Consensus 215 ~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n 294 (480)
.++..|=|.+|.. ..--.+|.+.++.|++.|+. .|-|==-.++... .|++ ...|.+ -+
T Consensus 504 VmlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWLpP~~~s~s~--------------~GY~-p~D~y~--ld 561 (894)
T PLN02784 504 ILCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWLPPPTESVSP--------------EGYM-PKDLYN--LN 561 (894)
T ss_pred EEEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEeCCCCCCCCC--------------CCcC-cccccc--cC
Confidence 3567787877753 12257889999999999987 3322111111110 0111 112322 35
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCcc
Q 011675 295 FKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVD 329 (480)
Q Consensus 295 ~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk 329 (480)
.+|-.. ..|+.+|+.+|++ | |+
T Consensus 562 s~yGT~-----------~ELk~LI~a~H~~-G-Ik 583 (894)
T PLN02784 562 SRYGTI-----------DELKDLVKSFHEV-G-IK 583 (894)
T ss_pred cCcCCH-----------HHHHHHHHHHHHC-C-CE
Confidence 677642 4799999999994 8 88
No 58
>PLN02361 alpha-amylase
Probab=56.71 E-value=2.8e+02 Score=29.84 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=48.5
Q ss_pred CCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcc
Q 011675 213 PPPIVDKFGWCTWDAFYLTVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQ 292 (480)
Q Consensus 213 ~P~~~d~~GWCTWdafy~~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~ 292 (480)
.+.++..|=|.+|+. --=.+|.+.|+.|++.|+. .|-|===.++.... |.+ ...+.+
T Consensus 11 ~~v~lQ~F~W~~~~~----~~w~~i~~kl~~l~~lG~t--~iwl~P~~~~~~~~--------------GY~-~~d~y~-- 67 (401)
T PLN02361 11 REILLQAFNWESHKH----DWWRNLEGKVPDLAKSGFT--SAWLPPPSQSLAPE--------------GYL-PQNLYS-- 67 (401)
T ss_pred CcEEEEEEeccCCcc----HHHHHHHHHHHHHHHcCCC--EEEeCCCCcCCCCC--------------CCC-cccccc--
Confidence 456888888887642 1337899999999999986 22221101111100 110 111322
Q ss_pred cCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhhcCCcc
Q 011675 293 ENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDEFKTVD 329 (480)
Q Consensus 293 ~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~~g~lk 329 (480)
-+.+|.+. ..|+.+|+.+|++ | ||
T Consensus 68 ~~~~~Gt~-----------~el~~li~~~h~~-g-i~ 91 (401)
T PLN02361 68 LNSAYGSE-----------HLLKSLLRKMKQY-N-VR 91 (401)
T ss_pred cCcccCCH-----------HHHHHHHHHHHHc-C-CE
Confidence 35677642 4799999999994 7 88
No 59
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=56.17 E-value=2e+02 Score=33.18 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=53.5
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccCCCCCCHHHH
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPPELV 391 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P~~v 391 (480)
.++..+.=.|+.+.| || ||-|..+..+=.+ +..+..+ .+. +...| ...+|++. ..+.--+| .+
T Consensus 380 d~f~~~aw~l~~r~~-v~-v~AWmp~~~~~~~--~~~~~~~---~~~-~~~~~--~~~~~~~~------~rl~P~~p-e~ 442 (671)
T PRK14582 380 DLFNRVAWQLRTRAG-VN-VYAWMPVLSFDLD--PTLPRVK---RLD-TGEGK--AQIHPEQY------RRLSPFDD-RV 442 (671)
T ss_pred CCcCHHHHHHHHhhC-CE-EEEeccceeeccC--CCcchhh---hcc-ccCCc--cccCCCCC------cCCCCCCH-HH
Confidence 477788888877778 98 9999766542111 1110000 010 11111 11233331 12333345 67
Q ss_pred HHHHHHHHHHHhh-cCCCEEEEcCcchhhh
Q 011675 392 DQMYEGLHSHLEK-VGIDGVKVDVIHLLEI 420 (480)
Q Consensus 392 ~~fyd~l~~~La~-~GVDgVKvD~q~~l~~ 420 (480)
+++..+++.-|+. +.||||-+|--.+|..
T Consensus 443 r~~i~~i~~dla~~~~~dGilf~Dd~~l~d 472 (671)
T PRK14582 443 RAQVGMLYEDLAGHAAFDGILFHDDAVLSD 472 (671)
T ss_pred HHHHHHHHHHHHHhCCCceEEecccccccc
Confidence 8888888888887 5999999999877643
No 60
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=55.31 E-value=41 Score=38.77 Aligned_cols=97 Identities=21% Similarity=0.517 Sum_probs=66.1
Q ss_pred ceEEEEEeCCCHHHHHHHHHHHHHHhhccCCCCCCCCCCcccccccc--ccccccccccCHHHHHHHHHHHHhCCCCCcE
Q 011675 176 RSVVYVHLGDDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGW--CTWDAFYLTVQPHGVMEGVKGLVDGGCPPGL 253 (480)
Q Consensus 176 ~~~l~v~~g~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GW--CTWdafy~~vt~~~I~~~l~~L~~~G~~~~~ 253 (480)
..-|++-.|..|-+++++.-+.. + ..++|.++. +|| |-|| -.+|+.|++-=+.+-+..+|..+
T Consensus 326 iiDvFi~lGP~~~Dv~~qyaaLT----G------~~~LPplFs-iGYHQcRWN----Y~DE~DV~~Vd~~FDehdiP~Dv 390 (915)
T KOG1066|consen 326 IIDVFIFLGPKPSDVFRQYAALT----G------TTPLPPLFS-IGYHQCRWN----YNDEEDVLTVDQGFDEHDIPYDV 390 (915)
T ss_pred cEEEEEEeCCChhHHHHHHHhhc----C------CCCCCchhh-cchhhcccc----ccchhhhhhhhcCccccCCccce
Confidence 34467788988887776654332 2 234665543 666 9998 25789999988999999999777
Q ss_pred EEEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHhh
Q 011675 254 VLIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSPNGGDSSDNKGMGAFIRDLKDE 324 (480)
Q Consensus 254 lIIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~~~~~~~~~~GLk~~V~~ik~~ 324 (480)
+=+| +...+. .|...| +..|||+|+ .|+++|.+|
T Consensus 391 iWLD-----IEhtdg-----------------KrYFTW-Dk~~FP~P~--------------~Ml~kLa~k 424 (915)
T KOG1066|consen 391 IWLD-----IEHTDG-----------------KRYFTW-DKHKFPNPK--------------DMLKKLASK 424 (915)
T ss_pred EEEe-----eeecCC-----------------ceeEee-ccccCCCHH--------------HHHHHHHhc
Confidence 6554 443211 133334 478999864 899999887
No 61
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=53.48 E-value=1.5e+02 Score=31.41 Aligned_cols=59 Identities=27% Similarity=0.559 Sum_probs=35.1
Q ss_pred HHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhh--------ccCCC----hhHHHHHHHHHHHHHHHhcc
Q 011675 389 ELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILC--------ENYGG----RVDLAKAYYKALTASVRKHF 447 (480)
Q Consensus 389 ~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~--------~~~gg----rv~l~~ay~~AL~~s~~~~F 447 (480)
++++.+-++|- +...++|+|||-+-+.+ +++.+- ..||| |..+.....+|+.+.+-..|
T Consensus 137 ~eI~~ii~~f~~AA~~a~~aGfDgVeih~ahGyLl~qFLSp~~N~RtDeYGGslenR~Rf~~eii~air~~vG~d~ 212 (361)
T cd04747 137 ADIDDVIAAFARAAADARRLGFDGIELHGAHGYLIDQFFWAGTNRRADGYGGSLAARSRFAAEVVKAIRAAVGPDF 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccchHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 56666666654 45567899999999866 232211 14554 55666666666655543333
No 62
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=52.91 E-value=68 Score=32.89 Aligned_cols=65 Identities=15% Similarity=0.272 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCC
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEH 458 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~ 458 (480)
+++....|.+.+.+++.++|+|||=+|..... .. .+..+....|.++|+ .+++.|+. +.+-+|+.
T Consensus 91 ~~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~----~~-~~~~~~~~~~~~~lk-~lr~~~~~-~~~lT~AP 155 (312)
T cd02871 91 HTAQEDNFVDSIVAIIKEYGFDGLDIDLESGS----NP-LNATPVITNLISALK-QLKDHYGP-NFILTMAP 155 (312)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEecccCC----cc-CCcHHHHHHHHHHHH-HHHHHcCC-CeEEEECC
Confidence 45678999999999999999999999996531 11 111233344555554 45666654 56666664
No 63
>PLN02960 alpha-amylase
Probab=52.58 E-value=98 Score=36.71 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=42.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccC---CC---------hhHHHHHHHHHHHHHHHhccCCC
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENY---GG---------RVDLAKAYYKALTASVRKHFKGN 450 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~---gg---------rv~l~~ay~~AL~~s~~~~F~~~ 450 (480)
+++-+|+..+.+.+.+.-.|.+.+|||+-+|+-..+-++..++ .| .-.-+-.|.+-|...+.+.+|+.
T Consensus 526 fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~v 605 (897)
T PLN02960 526 FKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYVDRDALIYLILANEMLHQLHPNI 605 (897)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcccccCCccCCchHHHHHHHHHHHHHhhCCCe
Confidence 3566777666667777777889999999999865543332111 01 01123345666666677767754
No 64
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=51.28 E-value=45 Score=34.01 Aligned_cols=28 Identities=29% Similarity=0.555 Sum_probs=19.9
Q ss_pred HHHHHHHHHHH---HHHhhcCCCEEEEcCcc
Q 011675 389 ELVDQMYEGLH---SHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 389 ~~v~~fyd~l~---~~La~~GVDgVKvD~q~ 416 (480)
+++...-++|- +...++|+|+|++.+.+
T Consensus 134 ~ei~~~i~~~~~aA~~a~~aGfDgveih~~~ 164 (327)
T cd02803 134 EEIEQIIEDFAAAARRAKEAGFDGVEIHGAH 164 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcchh
Confidence 55555555554 55668999999999853
No 65
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.96 E-value=3e+02 Score=29.96 Aligned_cols=148 Identities=14% Similarity=0.118 Sum_probs=74.2
Q ss_pred ccccc-ccCHHHHHHHHHHHHhCCCCCcEE-EEcCCcCcccCCCCCCCcccccccccCCcCCccccCcccCCCCCCCCCC
Q 011675 226 DAFYL-TVQPHGVMEGVKGLVDGGCPPGLV-LIDDGWQSISHDEDPIDSEGINRTAAGEQMPCRLLRYQENFKFRDYVSP 303 (480)
Q Consensus 226 dafy~-~vt~~~I~~~l~~L~~~G~~~~~l-IIDDGWQ~~~~d~~~p~~~~~~~~~~g~q~~~rl~~~~~n~KFp~~~~~ 303 (480)
++... -.+++.+.+.++.|...|+..-++ ++-||---.... ... |.... ...+.
T Consensus 54 n~~~~v~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~-----------------~~p-~s~~~-~~~~~----- 109 (418)
T COG1649 54 NADSRVLFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSA-----------------VLP-WSDGL-PGVLG----- 109 (418)
T ss_pred cCCCcccccHHHHHHHHHHHHHcCCceeEEEEecCcccccccc-----------------ccc-cccCc-CcccC-----
Confidence 34443 468899999999999999996555 443333221110 000 11111 00000
Q ss_pred CCCCCCCCCcHHHHHHHHHhhcCCccEEEEeeeccCCCCCCCCCCCCCCC-CcccccCCCCCCcccccccccccceeccC
Q 011675 304 NGGDSSDNKGMGAFIRDLKDEFKTVDQVYVWHALCGYWGGLRPNIPGLPE-KTTVVKPKLSPGLELTMEDLAVDKIVNNG 382 (480)
Q Consensus 304 ~~~~~~~~~GLk~~V~~ik~~~g~lk~V~vWHAl~GYWgGv~P~~~~~~~-~s~l~~p~~spg~~~~~pd~a~~~~~~~G 382 (480)
....-+=|+.+|++.|++ + |+ |--|- .|....+.. .-....|.+ +....|++.. ....|
T Consensus 110 ---~~~g~DpLa~~I~~AHkr-~-l~-v~aWf---------~~~~~a~~~s~~~~~~p~~---~~~~~~~~~~--~~~~~ 169 (418)
T COG1649 110 ---VDPGYDPLAFVIAEAHKR-G-LE-VHAWF---------NPYRMAPPTSPLTKRHPHW---LTTKRPGWVY--VRHQG 169 (418)
T ss_pred ---CCCCCChHHHHHHHHHhc-C-Ce-eeech---------hhcccCCCCChhHhhCCCC---cccCCCCeEE--EecCC
Confidence 011113589999999997 6 88 87773 333211111 111112221 1112232221 00111
Q ss_pred ---CCCCCH--HHHHHHHHHHH-HHHhhcCCCEEEEcCcch
Q 011675 383 ---VGFVPP--ELVDQMYEGLH-SHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 383 ---l~lv~P--~~v~~fyd~l~-~~La~~GVDgVKvD~q~~ 417 (480)
....|| .+++.|+-++. .....+.|||+-+|--+.
T Consensus 170 ~~~~~~ldPg~Pevq~~i~~lv~evV~~YdvDGIQfDd~fy 210 (418)
T COG1649 170 WGKRVWLDPGIPEVQDFITSLVVEVVRNYDVDGIQFDDYFY 210 (418)
T ss_pred ceeeeEeCCCChHHHHHHHHHHHHHHhCCCCCceecceeec
Confidence 122333 35677766665 555689999999998655
No 66
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=49.21 E-value=2e+02 Score=30.37 Aligned_cols=55 Identities=20% Similarity=0.256 Sum_probs=32.9
Q ss_pred HHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhh--------hccCCC----hhHHHHHHHHHHHHHH
Q 011675 389 ELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEIL--------CENYGG----RVDLAKAYYKALTASV 443 (480)
Q Consensus 389 ~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l--------~~~~gg----rv~l~~ay~~AL~~s~ 443 (480)
+++.+.-++|- +...++|+|||-+-+.+ +|+.+ ...||| |..+.....+|+.+.+
T Consensus 143 ~eI~~ii~~f~~AA~ra~~aGfDgVEih~ahGyLl~QFlSp~~N~RtD~yGGslenR~Rf~~eii~aIr~~v 214 (370)
T cd02929 143 DDIKRVRRWYVDAALRARDAGFDIVYVYAAHGYLPLQFLLPRYNKRTDEYGGSLENRARFWRETLEDTKDAV 214 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHhhCccccCCccccCCChHhhhHHHHHHHHHHHHHc
Confidence 56666655553 45567999999998765 22221 113454 5566666666665554
No 67
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.
Probab=46.33 E-value=2.5e+02 Score=29.78 Aligned_cols=61 Identities=25% Similarity=0.447 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH---HHHhhcCCCEEEEcCc---chhhhhhc--------cCCC----hhHHHHHHHHHHHHHHHhccC
Q 011675 388 PELVDQMYEGLH---SHLEKVGIDGVKVDVI---HLLEILCE--------NYGG----RVDLAKAYYKALTASVRKHFK 448 (480)
Q Consensus 388 P~~v~~fyd~l~---~~La~~GVDgVKvD~q---~~l~~l~~--------~~gg----rv~l~~ay~~AL~~s~~~~F~ 448 (480)
.+++..+-++|- +...++|+|||-+-+. ++++.+-. .||| |..+.....+++.+++-..|+
T Consensus 142 ~~eI~~ii~~f~~AA~ra~~AGfDgVEih~ah~GyLl~qFLSp~~N~RtDeyGGslenR~rf~~eii~~vr~~~g~~f~ 220 (382)
T cd02931 142 TEEVETFVGKFGESAVIAKEAGFDGVEIHAVHEGYLLDQFTISLFNKRTDKYGGSLENRLRFAIEIVEEIKARCGEDFP 220 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEeccccChHHHHhcCCccCCCCCcCCCCHHHHhHHHHHHHHHHHHhcCCCce
Confidence 356666666664 4555799999999873 34443221 3454 556666666656555444443
No 68
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=45.86 E-value=60 Score=30.36 Aligned_cols=31 Identities=29% Similarity=0.360 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+++....|.+.+-+++.++|+|||=+|...
T Consensus 84 ~~~~~~~~f~~~~~~~v~~~~~DGidiD~E~ 114 (210)
T cd00598 84 SDPASRAAFANSLVSFLKTYGFDGVDIDWEY 114 (210)
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCceEEeeeC
Confidence 4667889999999999999999999999964
No 69
>PLN02803 beta-amylase
Probab=44.74 E-value=2.2e+02 Score=31.94 Aligned_cols=31 Identities=19% Similarity=0.434 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC
Q 011675 233 QPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH 265 (480)
Q Consensus 233 t~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~ 265 (480)
+++.|.+.|+.|+..|+. =|+||==|--+..
T Consensus 105 ~~~~l~~~L~~LK~~GVd--GVmvDVWWGiVE~ 135 (548)
T PLN02803 105 KPRAMNASLMALRSAGVE--GVMVDAWWGLVEK 135 (548)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEeeeeeecc
Confidence 679999999999999998 8888866666554
No 70
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=44.37 E-value=37 Score=35.65 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=29.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 385 FVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 385 lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
+.+|+....|-+.+.+++.++|+|||=+|....
T Consensus 91 l~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p 123 (358)
T cd02875 91 ISNPTYRTQWIQQKVELAKSQFMDGINIDIEQP 123 (358)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCeEEEcccCC
Confidence 457788889999999999999999999999754
No 71
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=43.04 E-value=2.1e+02 Score=29.58 Aligned_cols=27 Identities=11% Similarity=0.035 Sum_probs=19.9
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYW 341 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYW 341 (480)
.||+.+++.+|+ +|..=.+=+||+ |.+
T Consensus 82 ~~~~~l~~~vh~-~G~~~~~Ql~h~--G~~ 108 (338)
T cd04733 82 EAFREWAAAAKA-NGALIWAQLNHP--GRQ 108 (338)
T ss_pred HHHHHHHHHHHh-cCCEEEEEccCC--CcC
Confidence 399999999999 673335667984 544
No 72
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.
Probab=39.91 E-value=3.9e+02 Score=27.85 Aligned_cols=56 Identities=20% Similarity=0.430 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhh--------ccCCC----hhHHHHHHHHHHHHHH
Q 011675 388 PELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILC--------ENYGG----RVDLAKAYYKALTASV 443 (480)
Q Consensus 388 P~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~--------~~~gg----rv~l~~ay~~AL~~s~ 443 (480)
.+++.++-++|- +...++|+|||-+-+.+ +|..+- ..||| |..+.....+|+.+.+
T Consensus 144 ~~eI~~ii~~f~~aA~~a~~aGfDgVeih~ahGyLl~qFlSp~~N~R~D~yGGslenR~rf~~eii~air~~v 216 (338)
T cd02933 144 TEEIPGIVADFRQAARNAIEAGFDGVEIHGANGYLIDQFLRDGSNKRTDEYGGSIENRARFLLEVVDAVAEAI 216 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchhHHHhcCCccCCCCCcCCCcHHHhhhHHHHHHHHHHHHh
Confidence 355555555553 56668999999998765 333221 13454 5556655665555444
No 73
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=39.36 E-value=49 Score=32.63 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
.+|+....|.+.+.+++.++|+|||=+|....
T Consensus 79 ~~~~~r~~fi~~lv~~~~~~~~DGIdiDwE~~ 110 (253)
T cd06545 79 NDPAKRKALVDKIINYVVSYNLDGIDVDLEGP 110 (253)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCceeEEeecc
Confidence 46778889999999999999999999999653
No 74
>PLN00197 beta-amylase; Provisional
Probab=39.17 E-value=3.1e+02 Score=30.92 Aligned_cols=32 Identities=13% Similarity=0.315 Sum_probs=26.3
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC
Q 011675 232 VQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH 265 (480)
Q Consensus 232 vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~ 265 (480)
.+++.|.+.|+.|+..|+. =|.||==|--+..
T Consensus 124 ~~~~~l~~~L~~LK~~GVd--GVmvDvWWGiVE~ 155 (573)
T PLN00197 124 NRRKAMKASLQALKSAGVE--GIMMDVWWGLVER 155 (573)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEeeeeeeecc
Confidence 4778999999999999998 8888866665554
No 75
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=38.60 E-value=3.2e+02 Score=30.90 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 384 GFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 384 ~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
..-+|+....+.+.+.-.+.+.||||+-+|+-.
T Consensus 290 ~~~~~~v~~~i~~~~~~W~~e~~iDGfR~D~~~ 322 (605)
T TIGR02104 290 ASEREMMRKFIVDSVLYWVKEYNIDGFRFDLMG 322 (605)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCCEEEEechh
Confidence 334665555556666666667999999999753
No 76
>PLN02411 12-oxophytodienoate reductase
Probab=38.27 E-value=3.9e+02 Score=28.49 Aligned_cols=56 Identities=20% Similarity=0.448 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhhc--------cCCC----hhHHHHHHHHHHHHHH
Q 011675 388 PELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILCE--------NYGG----RVDLAKAYYKALTASV 443 (480)
Q Consensus 388 P~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~~--------~~gg----rv~l~~ay~~AL~~s~ 443 (480)
.+++...-++|- +...++|+|||-+=+-+ +++.+-. .||| |..+.....+|+.+.+
T Consensus 157 ~~eI~~ii~~f~~AA~rA~~AGFDGVEIH~AhGYLl~QFLSp~tN~RtDeYGGSlENR~RF~lEIi~aVr~~v 229 (391)
T PLN02411 157 TSEIPEVVEHYRQAALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQVVQAVVSAI 229 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCCCcCCCCHHHHhHHHHHHHHHHHHHc
Confidence 367777766664 45557999999998754 3333211 3554 5555555555555443
No 77
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=37.93 E-value=93 Score=30.53 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhccCCCceEeecCCCCCc
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKHFKGNGVIASMEHCNDF 462 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~F~~~~iI~CMs~~~~~ 462 (480)
+++....|.+.+..++..+|+|||=+|....... ..+....-...|...++ .+++.|+..+-+-++...+..
T Consensus 85 ~~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~---~~~~~~~~~~~~~~lv~-~Lr~~~~~~~kllt~~~~~~~ 156 (255)
T cd06542 85 SDAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYG---KNGTSQPSNEAFVRLIK-ELRKYMGPTDKLLTIDGYGQA 156 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeeecccC---CCCCCcchHHHHHHHHH-HHHHHhCcCCcEEEEEecCCc
Confidence 4577899999999999999999999998643210 01101112233444333 456666533345556544433
No 78
>PLN03244 alpha-amylase; Provisional
Probab=37.58 E-value=2.6e+02 Score=33.10 Aligned_cols=123 Identities=9% Similarity=0.045 Sum_probs=64.4
Q ss_pred CCCCcHHHHHHHHHhhcCCccEEEEe-eeccCCCCCCCCCC-CCCCC-C--cccccCCCCCCcccccccccccceeccCC
Q 011675 309 SDNKGMGAFIRDLKDEFKTVDQVYVW-HALCGYWGGLRPNI-PGLPE-K--TTVVKPKLSPGLELTMEDLAVDKIVNNGV 383 (480)
Q Consensus 309 ~~~~GLk~~V~~ik~~~g~lk~V~vW-HAl~GYWgGv~P~~-~~~~~-~--s~l~~p~~spg~~~~~pd~a~~~~~~~Gl 383 (480)
+.+++||.+|+++|+ .| |+-+.=| |.-++ |+. .++.. + ....+-. +-.+.++.| +.. -+
T Consensus 438 GTPeDLK~LVD~aH~-~G-I~VILDvV~NH~~------~d~~~GL~~fDGt~~~Yf~~---~~~g~~~~W--Gs~---~f 501 (872)
T PLN03244 438 GTPDDFKRLVDEAHG-LG-LLVFLDIVHSYAA------ADEMVGLSLFDGSNDCYFHT---GKRGHHKHW--GTR---MF 501 (872)
T ss_pred CCHHHHHHHHHHHHH-CC-CEEEEEecCccCC------CccccchhhcCCCccceecc---CCCCccCCC--CCc---ee
Confidence 567799999999999 48 8744445 21111 111 01111 0 1111110 101222222 221 13
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCC--------------hhHHHHHHHHHHHHHHHhccCC
Q 011675 384 GFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGG--------------RVDLAKAYYKALTASVRKHFKG 449 (480)
Q Consensus 384 ~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~gg--------------rv~l~~ay~~AL~~s~~~~F~~ 449 (480)
++-+|+..+.+.+.+.-.+.+.+|||+-+|+-..+-++. +|- .-.-+-.|.+-+...+.+.+|+
T Consensus 502 nyg~~EVr~FLLsna~yWleEyhIDGFRfDaVtSMLY~d--~G~~~f~g~~~~y~n~~~d~dAv~fL~laN~~ih~~~P~ 579 (872)
T PLN03244 502 KYGDLDVLHFLISNLNWWITEYQIDGFQFHSLASMIYTH--NGFASFNGDLDDYCNQYVDKDALMYLILANEILHALHPK 579 (872)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCcCcceeecchhheeec--cccccccCCccccccccCCchHHHHHHHHHHHHHHhCCC
Confidence 455676655556777777789999999999864433322 210 0012345666666777778875
No 79
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=36.84 E-value=92 Score=31.93 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+++....|-+.+.+++.+.|+|||=+|...
T Consensus 105 ~~~~~r~~Fi~siv~~l~~~~fDGidiDwE~ 135 (322)
T cd06548 105 ATEASRAKFADSAVDFIRKYGFDGIDIDWEY 135 (322)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCeEEECCcC
Confidence 3677888999999999999999999999864
No 80
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=36.43 E-value=85 Score=31.86 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
-+|+....|.+.+.+++.++|+|||-+|...
T Consensus 83 ~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~ 113 (313)
T cd02874 83 SNPEARQRLINNILALAKKYGYDGVNIDFEN 113 (313)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCcEEEeccc
Confidence 4677788999999999999999999999965
No 81
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=36.18 E-value=92 Score=32.50 Aligned_cols=63 Identities=19% Similarity=0.373 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHHhhccCCCCCCCCCCcccccccccccccc-ccccCHHHHHHHHHHHHhCCCC
Q 011675 185 DDPFKLVKDAMRVVRSHLGTFKLLDEKTPPPIVDKFGWCTWDAF-YLTVQPHGVMEGVKGLVDGGCP 250 (480)
Q Consensus 185 ~dp~~~i~~A~~~~~~~l~tf~~~~~k~~P~~~d~~GWCTWdaf-y~~vt~~~I~~~l~~L~~~G~~ 250 (480)
.+||++++++.+..++.+..... ..+-+| |+..|.. +|-.= +...+++.|.+.++++.+.|+.
T Consensus 242 ~~PY~~v~~~~~~~~~~~~~~~~-~~~~RP-WlQ~Ft~-~~~~~~~~~Yg~~ev~aQI~A~~d~g~~ 305 (316)
T PF13200_consen 242 LEPYEIVYRSLKRAKERLRGLEG-PAIIRP-WLQDFTA-SWLGKNYKEYGPEEVRAQIQALKDAGIE 305 (316)
T ss_pred cChHHHHHHHHHHHHHHhhcCCC-CCeEec-ccccccc-cccccCccccCHHHHHHHHHHHHHcCCC
Confidence 58999999999988876543211 223344 3332321 33222 5678999999999999999997
No 82
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=35.60 E-value=89 Score=32.39 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+|+....|-+.+.+++.++|+|||=+|...
T Consensus 92 ~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~ 122 (362)
T cd02872 92 ASPENRKTFIKSAIAFLRKYGFDGLDLDWEY 122 (362)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeeeeeec
Confidence 4567788999999999999999999999854
No 83
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....
Probab=34.62 E-value=1.2e+02 Score=30.68 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
+++....|.+.+-+++.++|+|||-+|....
T Consensus 96 ~~~~r~~f~~~i~~~l~~y~~DGidiD~e~~ 126 (343)
T PF00704_consen 96 NPAKRQNFINNIVSFLKKYGFDGIDIDWEYP 126 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHHT-SEEEEEESST
T ss_pred cHHHHHHHHHhhhhhhcccCcceeeeeeeec
Confidence 5678899999999999999999999999654
No 84
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=33.36 E-value=6.4e+02 Score=28.09 Aligned_cols=35 Identities=26% Similarity=0.586 Sum_probs=25.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675 383 VGFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418 (480)
Q Consensus 383 l~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l 418 (480)
++.-+|+....+++- .+++.+.||||+-+|+-..+
T Consensus 164 ln~~np~v~~~i~~~-~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 164 LNWENPEVREELKDV-VNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred cCCCCHHHHHHHHHH-HHHHHHcCCCEEEEeeehhh
Confidence 456678666666654 55666789999999986554
No 85
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=32.85 E-value=3.5e+02 Score=28.28 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=20.5
Q ss_pred CcHHHHHHHHHhhcCCccEEEEeeeccCCC
Q 011675 312 KGMGAFIRDLKDEFKTVDQVYVWHALCGYW 341 (480)
Q Consensus 312 ~GLk~~V~~ik~~~g~lk~V~vWHAl~GYW 341 (480)
.+++.+++.+|+ +|..=.+=+||+ |.+
T Consensus 78 ~~~~~l~~~vh~-~G~~i~~QL~h~--G~~ 104 (353)
T cd04735 78 PGLRKLAQAIKS-KGAKAILQIFHA--GRM 104 (353)
T ss_pred HHHHHHHHHHHh-CCCeEEEEecCC--CCC
Confidence 499999999999 574446778886 544
No 86
>PLN02705 beta-amylase
Probab=32.05 E-value=5e+02 Score=29.79 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=26.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC
Q 011675 231 TVQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH 265 (480)
Q Consensus 231 ~vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~ 265 (480)
=.+++.|.+.|+.|+..|+. =|+||==|--+..
T Consensus 264 l~~~~al~a~L~aLK~aGVd--GVmvDVWWGiVE~ 296 (681)
T PLN02705 264 LVDPEGVRQELSHMKSLNVD--GVVVDCWWGIVEG 296 (681)
T ss_pred ccCHHHHHHHHHHHHHcCCC--EEEEeeeeeEeec
Confidence 35789999999999999998 8888866665544
No 87
>PLN02877 alpha-amylase/limit dextrinase
Probab=30.87 E-value=4.4e+02 Score=31.82 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcchh
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIHLL 418 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l 418 (480)
+|.....+.|.+.-.+.++||||+-+|.-..+
T Consensus 533 ~~mvrklIlDsl~yW~~ey~VDGFRFDlmg~i 564 (970)
T PLN02877 533 HYMVDRLIVDDLLNWAVNYKVDGFRFDLMGHL 564 (970)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCEEEEEccccc
Confidence 34344455777777777899999999996553
No 88
>PRK10605 N-ethylmaleimide reductase; Provisional
Probab=29.29 E-value=5.2e+02 Score=27.21 Aligned_cols=56 Identities=25% Similarity=0.345 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhhc--------cCCC----hhHHHHHHHHHHHHHH
Q 011675 388 PELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILCE--------NYGG----RVDLAKAYYKALTASV 443 (480)
Q Consensus 388 P~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~~--------~~gg----rv~l~~ay~~AL~~s~ 443 (480)
.+++.+.-++|- +...++|+|||-+-+.+ +++.+-. .||| |..+.....+|+.+.+
T Consensus 151 ~~eI~~ii~~f~~AA~rA~~AGfDGVEIh~ahGyLl~qFLSp~~N~RtDeYGGslENR~Rf~~Eiv~aVr~~v 223 (362)
T PRK10605 151 LEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAGIAEW 223 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHhcCCcCCCCCCcCCCcHHHHHHHHHHHHHHHHHHc
Confidence 356666655553 55668999999999865 3333211 3454 5555555555555443
No 89
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=28.48 E-value=1.3e+02 Score=30.66 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcC
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDV 414 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~ 414 (480)
.+|+....|-+.+.+++.++|+|||=+|.
T Consensus 88 ~~~~~R~~fi~s~~~~~~~~~~DGidiD~ 116 (318)
T cd02876 88 NDEQEREKLIKLLVTTAKKNHFDGIVLEV 116 (318)
T ss_pred cCHHHHHHHHHHHHHHHHHcCCCcEEEec
Confidence 46778889999999999999999999993
No 90
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=28.12 E-value=5.4e+02 Score=30.84 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCc
Q 011675 384 GFVPPELVDQMYEGLHSHLEKVGIDGVKVDVI 415 (480)
Q Consensus 384 ~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q 415 (480)
..-+|.....+.+.+.-.+.++||||+-+|.-
T Consensus 467 a~e~~~Vrk~iiDsl~~W~~ey~VDGFRfDlm 498 (898)
T TIGR02103 467 ATEHRMMAKLIVDSLVVWAKDYKVDGFRFDLM 498 (898)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEech
Confidence 34467555666777777777999999999974
No 91
>PLN02801 beta-amylase
Probab=28.05 E-value=7.2e+02 Score=27.84 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=25.4
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC
Q 011675 232 VQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH 265 (480)
Q Consensus 232 vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~ 265 (480)
.+++.|.+.|+.|+..|+. =|.+|==|--+..
T Consensus 34 ~~~~~l~~~L~~LK~~GVd--GVmvDVWWGiVE~ 65 (517)
T PLN02801 34 EDEEGLEKQLKRLKEAGVD--GVMVDVWWGIVES 65 (517)
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEeeeeeeecc
Confidence 4688999999999999997 7777765555543
No 92
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=27.97 E-value=1.4e+02 Score=30.39 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 385 FVPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 385 lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+.+|+....|.+.+-+++.+.|+|||-+|...
T Consensus 83 l~~~~~R~~fi~~iv~~~~~~~~dGidiD~E~ 114 (298)
T cd06549 83 LADPSARAKFIANIAAYLERNQADGIVLDFEE 114 (298)
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCCCEEEecCC
Confidence 35788888999999999999999999999964
No 93
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]
Probab=27.95 E-value=90 Score=33.49 Aligned_cols=66 Identities=32% Similarity=0.421 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEE---EcCcc--hhhhhhcc-CCChh----HHHHHHHHHHH----HHHHhccCCCc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVK---VDVIH--LLEILCEN-YGGRV----DLAKAYYKALT----ASVRKHFKGNG 451 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVK---vD~q~--~l~~l~~~-~ggrv----~l~~ay~~AL~----~s~~~~F~~~~ 451 (480)
-+|+.++.....+-+-|+..||+-.- +|..+ .....++. |+..+ .++.+|.++|+ .+..||||+.+
T Consensus 93 ~~~~la~~~g~~~A~Elra~Gin~~fAPvlDv~~~p~~~ri~ersfgeDP~lv~~l~~a~i~Glq~~gv~at~KHFpGhG 172 (397)
T COG1472 93 WDPELARKVGRVIAKELRALGINLDFAPVLDVARDPRWGRIGERSFGEDPELVALLAAAFIKGLQGAGVAATIKHFPGHG 172 (397)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCccccceeecccCCCcCccccccCCCCHHHHHHHHHHHHHHHhhCCceeeeccccCCC
Confidence 46899999999999999999988543 34432 22223333 44433 56677777776 34566666654
No 94
>PRK09993 C-lysozyme inhibitor; Provisional
Probab=27.67 E-value=32 Score=32.15 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=32.6
Q ss_pred hhhcccceeeecCCCCCcceeeeEeeCCeEEEcCeeccc
Q 011675 6 SKVASGVRTLVDGSDNQSTNIDITLEDSKLHANGHVFLS 44 (480)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~l~ 44 (480)
+|.+.||+..||..+++-+..=+-+.|+- ++.|+++|-
T Consensus 99 kk~a~Gvlv~vd~k~~~~~l~WL~~~d~~-sidg~tvl~ 136 (153)
T PRK09993 99 SNQMTGVFSTIDEKTSQEKLTWLNVNDAL-SIDGKTVLF 136 (153)
T ss_pred CcceEEEEEEcCCCcChhheeeecCCCCc-ccccceeeH
Confidence 46789999999999999888888887775 999999874
No 95
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
Probab=27.44 E-value=5.5e+02 Score=27.28 Aligned_cols=60 Identities=27% Similarity=0.495 Sum_probs=36.2
Q ss_pred HHHHHHHHHHH---HHHhhcCCCEEEEcCcc--hhhhhhc--------cCCC----hhHHHHHHHHHHHHHHHhccC
Q 011675 389 ELVDQMYEGLH---SHLEKVGIDGVKVDVIH--LLEILCE--------NYGG----RVDLAKAYYKALTASVRKHFK 448 (480)
Q Consensus 389 ~~v~~fyd~l~---~~La~~GVDgVKvD~q~--~l~~l~~--------~~gg----rv~l~~ay~~AL~~s~~~~F~ 448 (480)
+++.+.-++|- +.-.++|+|||-+=.-+ +|+.+-. .||| |..+....-+|..+.+-..|+
T Consensus 142 ~eI~~ii~~f~~AA~rA~~AGFDgVEIH~AhGYLi~qFlsp~tN~RtD~YGGSlENR~Rf~~EVv~aVr~~vg~~~~ 218 (363)
T COG1902 142 EEIEEVIEDFARAARRAKEAGFDGVEIHGAHGYLLSQFLSPLTNKRTDEYGGSLENRARFLLEVVDAVREAVGADFP 218 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchHHHHhcCCccCCCCCccCCcHHHHHHHHHHHHHHHHHHhCCCce
Confidence 45555555553 33346999999998854 2322111 3555 667777777777777766553
No 96
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=26.86 E-value=71 Score=32.18 Aligned_cols=27 Identities=26% Similarity=0.321 Sum_probs=24.3
Q ss_pred ccccCHHHHHHHHHHHHhCCCCCcEEEEc
Q 011675 229 YLTVQPHGVMEGVKGLVDGGCPPGLVLID 257 (480)
Q Consensus 229 y~~vt~~~I~~~l~~L~~~G~~~~~lIID 257 (480)
...+|+|++++.+++|++.++. |+|||
T Consensus 94 Kdalt~E~v~~vv~eL~~~~fD--yIi~D 120 (272)
T COG2894 94 KDALTPEGVKKVVNELKAMDFD--YIIID 120 (272)
T ss_pred cccCCHHHHHHHHHHHHhcCCC--EEEec
Confidence 3478999999999999998887 99999
No 97
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.
Probab=26.67 E-value=1.5e+02 Score=29.60 Aligned_cols=30 Identities=27% Similarity=0.519 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+++....|++.+.+++.++|+|||-+|...
T Consensus 93 ~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~ 122 (256)
T cd06546 93 DDEDFERYYGQLRDMIRRRGLDGLDLDVEE 122 (256)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeec
Confidence 456778999999999999999999999953
No 98
>PLN02905 beta-amylase
Probab=25.32 E-value=7.3e+02 Score=28.65 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=26.2
Q ss_pred cCHHHHHHHHHHHHhCCCCCcEEEEcCCcCcccC
Q 011675 232 VQPHGVMEGVKGLVDGGCPPGLVLIDDGWQSISH 265 (480)
Q Consensus 232 vt~~~I~~~l~~L~~~G~~~~~lIIDDGWQ~~~~ 265 (480)
.+++.|.+.|+.|+..|+. =|.||==|--+..
T Consensus 283 ~~~~al~a~L~aLK~aGVd--GVmvDVWWGiVE~ 314 (702)
T PLN02905 283 ADPDGLLKQLRILKSINVD--GVKVDCWWGIVEA 314 (702)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEeeeeeeeec
Confidence 4678999999999999998 8888866655544
No 99
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=24.32 E-value=1.8e+02 Score=31.11 Aligned_cols=31 Identities=23% Similarity=0.324 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
.+++....|-+.+.++|.++|+|||=+|...
T Consensus 101 ~~~~~R~~Fi~siv~~l~~~~fDGidiDWEy 131 (413)
T cd02873 101 ESSESRNAFINSAHSLLKTYGFDGLDLAWQF 131 (413)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEeeeeC
Confidence 4677888999999999999999999999863
No 100
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin is a heterotrimeric enzyme that inhibits yeast cell cycle progression. The zymocin alpha subunit has a chitinase activity that is essential for holoenzyme action from the cell exterior while the gamma subunit contains the intracellular toxin responsible for G1 phase cell cycle arrest. The zymocin alpha and beta subunits are thought to act from the cell's exterior by docking to the cell wall-associated chitin, thus mediating gamma-toxin translocation. The alpha subunit has an eight-stranded TIM barrel fold similar to that of family 18 glycosyl hydrolases such as hevamine, chitolectin, and chitobiase.
Probab=23.85 E-value=2.6e+02 Score=29.05 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCEEEEcCcc
Q 011675 387 PPELVDQMYEGLHSHLEKVGIDGVKVDVIH 416 (480)
Q Consensus 387 ~P~~v~~fyd~l~~~La~~GVDgVKvD~q~ 416 (480)
+|+....|-+.+.+++..+|+|||-+|...
T Consensus 88 ~~~~R~~Fi~si~~~~~~~~fDGidiDwE~ 117 (345)
T cd02878 88 KPANRDTFANNVVNFVNKYNLDGVDFDWEY 117 (345)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceeecccC
Confidence 788889999999999999999999999974
No 101
>PF01136 Peptidase_U32: Peptidase family U32 This is family U32 in the peptidase classification. ; InterPro: IPR001539 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belonging to MEROPS peptidase family U32 (clan U-). The type example is collagenase (gene prtC) from Porphyromonas gingivalis (Bacteroides gingivalis) [], which is an enzyme that degrades type I collagen and that seems to require a metal cofactor. The product of PrtC is evolutionary related to a number of uncharacterised proteins with a well conserved region containing two cysteines.; GO: 0008233 peptidase activity, 0006508 proteolysis
Probab=23.74 E-value=95 Score=29.97 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHH
Q 011675 384 GFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTAS 442 (480)
Q Consensus 384 ~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s 442 (480)
.+.++++ .-.++.+ .-|.+.||+.+|+|....-. .--.+.+++|++||...
T Consensus 149 ~i~n~~~-l~l~~~l-~~L~~~Gv~~~rI~~r~~~~------~~~~~iv~~Y~~~l~~~ 199 (233)
T PF01136_consen 149 HILNSKD-LCLLDEL-PELKDAGVDSFRIDGRTESP------EYIEEIVKAYREALDNP 199 (233)
T ss_pred cccCHHH-hhHHHHH-HHHHHcCCCEEEEcCccCCH------HHHHHHHHHHHHHHHHH
Confidence 4556544 3333333 34678999999999964310 00237788899988853
No 102
>smart00636 Glyco_18 Glycosyl hydrolase family 18.
Probab=23.62 E-value=2.2e+02 Score=28.98 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCEEEEcCcch
Q 011675 386 VPPELVDQMYEGLHSHLEKVGIDGVKVDVIHL 417 (480)
Q Consensus 386 v~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~ 417 (480)
.+++....|-+.+.+++.++|+|||=+|....
T Consensus 87 ~~~~~r~~fi~~i~~~~~~~~~DGidiDwE~~ 118 (334)
T smart00636 87 SDPASRKKFIDSIVSFLKKYGFDGIDIDWEYP 118 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEECCcCC
Confidence 45778889999999999999999999998653
No 103
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism]
Probab=22.71 E-value=1.7e+02 Score=31.75 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHHHHHHHHHHHHHhc
Q 011675 385 FVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAKAYYKALTASVRKH 446 (480)
Q Consensus 385 lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~ay~~AL~~s~~~~ 446 (480)
+.+|+.-..|.+...++|.++|+|||-+|.+.-. .-......-..+.+..+.|++.-..+.
T Consensus 142 ~s~~~~r~~FI~Sii~fl~~~~fDGvDL~We~P~-~~~~d~~~~~~~i~elr~~~~~~~~~~ 202 (432)
T KOG2806|consen 142 LSDRMIRAKFIESVVSFIKDYGFDGVDLAWEWPL-FTPSDQLEFSRFIQELRSAFARETLKS 202 (432)
T ss_pred hcChHHHHHHHHHHHHHHHHcCCCceeeeeECCC-CchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 4577888999999999999999999999997531 000011123477777777777554443
No 104
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=22.21 E-value=2.9e+02 Score=28.89 Aligned_cols=73 Identities=22% Similarity=0.250 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCEEEEcCcchhhhhhccCCChhHHHH---HHHHHHHHHHHhccCCCceEeecCCC
Q 011675 384 GFVPPELVDQMYEGLHSHLEKVGIDGVKVDVIHLLEILCENYGGRVDLAK---AYYKALTASVRKHFKGNGVIASMEHC 459 (480)
Q Consensus 384 ~lv~P~~v~~fyd~l~~~La~~GVDgVKvD~q~~l~~l~~~~ggrv~l~~---ay~~AL~~s~~~~F~~~~iI~CMs~~ 459 (480)
++-+|+ -+.|..+....|.+.|+|||-.|+--..........++....+ .+-++|.+.+++.+|+ ++-++-.+
T Consensus 139 d~~~~~-W~~il~~rl~~l~~kGfDGvfLD~lDsy~~~~~~~~~~~~~~~~m~~~i~~Ia~~ar~~~P~--~~II~NnG 214 (315)
T TIGR01370 139 KYWDPE-WKAIAFSYLDRVIAQGFDGVYLDLIDAFEYWAENGDNRPGAAAEMIAFVCEIAAYARAQNPQ--FVIIPQNG 214 (315)
T ss_pred ecccHH-HHHHHHHHHHHHHHcCCCeEeeccchhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHCCC--EEEEecCc
Confidence 556664 4556555567778999999999985443333221122333232 3445554555777775 44444333
No 105
>TIGR02630 xylose_isom_A xylose isomerase. Members of this family are the enzyme xylose isomerase (5.3.1.5), which interconverts D-xylose and D-xylulose.
Probab=22.03 E-value=3.3e+02 Score=29.78 Aligned_cols=18 Identities=39% Similarity=0.709 Sum_probs=15.2
Q ss_pred EEEeeeccCCCCCCCCCCCC
Q 011675 331 VYVWHALCGYWGGLRPNIPG 350 (480)
Q Consensus 331 V~vWHAl~GYWgGv~P~~~~ 350 (480)
|+.||+++ |.|..|.+.+
T Consensus 43 ~~~Wht~~--~~G~DpFG~~ 60 (434)
T TIGR02630 43 VAYWHTFC--GDGGDPFGDG 60 (434)
T ss_pred eeecccCC--CCCCCCCCCc
Confidence 89999987 8999998743
No 106
>PRK05474 xylose isomerase; Provisional
Probab=20.99 E-value=3.2e+02 Score=29.86 Aligned_cols=54 Identities=22% Similarity=0.362 Sum_probs=33.3
Q ss_pred EEEeeeccCCCCCCCCCCCCCCCCcccccCCCCCCcccccccccccceeccCCCCCCH-HHHHHHHHHHHHHHhhcCCCE
Q 011675 331 VYVWHALCGYWGGLRPNIPGLPEKTTVVKPKLSPGLELTMEDLAVDKIVNNGVGFVPP-ELVDQMYEGLHSHLEKVGIDG 409 (480)
Q Consensus 331 V~vWHAl~GYWgGv~P~~~~~~~~s~l~~p~~spg~~~~~pd~a~~~~~~~Gl~lv~P-~~v~~fyd~l~~~La~~GVDg 409 (480)
|+.||+++ |.|-.|.+.+.. ..|-. ...+| +.|..=.+..+.++++.|+.|
T Consensus 44 ~~~Wht~~--~~G~DpFG~~T~-----~rpw~---------------------~~~d~~~~a~~k~d~afe~~~kLg~~~ 95 (437)
T PRK05474 44 VAYWHTFC--WPGADPFGGGTF-----QRPWD---------------------QPGDALDLAKAKADAAFEFFTKLGVPY 95 (437)
T ss_pred eeecccCC--CCCCCCCCCccc-----cCCCc---------------------CCCCHHHHHHHHHHHHHHHHHHhCCCe
Confidence 89999987 899999874311 11100 01122 444554566667788888888
Q ss_pred EEE
Q 011675 410 VKV 412 (480)
Q Consensus 410 VKv 412 (480)
+-+
T Consensus 96 ~~F 98 (437)
T PRK05474 96 YCF 98 (437)
T ss_pred ecc
Confidence 764
No 107
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=20.68 E-value=1.7e+02 Score=31.05 Aligned_cols=25 Identities=32% Similarity=0.320 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhcCCCEEEEcCc
Q 011675 391 VDQMYEGLHSHLEKVGIDGVKVDVI 415 (480)
Q Consensus 391 v~~fyd~l~~~La~~GVDgVKvD~q 415 (480)
...+++.+..++.+.|||||-.|.=
T Consensus 323 ~~~~~~~~~~~~~~~GvDGvftD~p 347 (356)
T cd08560 323 DGDMYNVLDVLARDVGILGIFSDWP 347 (356)
T ss_pred cccHHHHHHHHHHhcCCCEEEccCC
Confidence 3456666777778999999999984
Done!