Query 011677
Match_columns 479
No_of_seqs 179 out of 1511
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:05:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otr_A Enolase; structural gen 100.0 9E-116 3E-120 897.6 41.4 428 44-478 1-443 (452)
2 3qtp_A Enolase 1; glycolysis, 100.0 1E-114 5E-119 889.2 44.4 428 44-479 5-440 (441)
3 3tqp_A Enolase; energy metabol 100.0 1E-99 3E-104 789.1 44.7 411 45-475 3-422 (428)
4 3uj2_A Enolase 1; enzyme funct 100.0 7E-100 2E-104 794.1 43.1 414 44-474 25-447 (449)
5 3qn3_A Enolase; structural gen 100.0 1.8E-99 6E-104 784.9 40.7 406 44-474 4-416 (417)
6 2al1_A Enolase 1, 2-phospho-D- 100.0 5.5E-97 2E-101 772.3 42.6 424 46-478 1-433 (436)
7 2akz_A Gamma enolase, neural; 100.0 2.1E-96 7E-101 768.5 42.5 423 46-478 1-430 (439)
8 2ptz_A Enolase; lyase, glycoly 100.0 8.3E-90 2.8E-94 719.4 43.3 422 44-475 3-431 (432)
9 2fym_A Enolase; RNA degradosom 100.0 8.4E-84 2.9E-88 675.3 43.6 415 45-478 1-430 (431)
10 1w6t_A Enolase; bacterial infe 100.0 3E-83 1E-87 672.8 42.4 421 44-477 11-441 (444)
11 2pa6_A Enolase; glycolysis, ly 100.0 4.3E-81 1.5E-85 654.6 43.3 415 44-479 8-427 (427)
12 1kko_A 3-methylaspartate ammon 100.0 1.5E-48 5.2E-53 406.3 16.3 327 62-465 51-410 (413)
13 1kcz_A Beta-methylaspartase; b 100.0 9.4E-48 3.2E-52 400.7 14.7 331 62-466 51-411 (413)
14 2qq6_A Mandelate racemase/muco 100.0 2.2E-46 7.4E-51 390.3 20.7 319 44-436 5-337 (410)
15 2ox4_A Putative mandelate race 100.0 3.2E-45 1.1E-49 380.7 24.7 315 45-436 3-336 (403)
16 4hnl_A Mandelate racemase/muco 100.0 3E-45 1E-49 382.7 21.8 320 38-437 19-351 (421)
17 2o56_A Putative mandelate race 100.0 5E-44 1.7E-48 372.2 25.3 316 44-436 3-342 (407)
18 2gl5_A Putative dehydratase pr 100.0 4.1E-44 1.4E-48 373.2 24.6 316 45-436 3-345 (410)
19 2poz_A Putative dehydratase; o 100.0 2.6E-43 8.9E-48 365.0 23.8 311 45-436 3-326 (392)
20 4hpn_A Putative uncharacterize 100.0 5.2E-42 1.8E-46 353.6 25.5 304 45-440 1-319 (378)
21 3tji_A Mandelate racemase/muco 100.0 1.8E-42 6.3E-47 361.1 21.9 316 38-436 19-351 (422)
22 3fcp_A L-Ala-D/L-Glu epimerase 100.0 3.6E-42 1.2E-46 355.0 22.8 301 44-436 4-321 (381)
23 2pp0_A L-talarate/galactarate 100.0 5.2E-42 1.8E-46 355.8 23.7 299 44-437 25-343 (398)
24 3rcy_A Mandelate racemase/muco 100.0 6.4E-42 2.2E-46 357.9 24.3 314 44-435 1-329 (433)
25 3t6c_A RSPA, putative MAND fam 100.0 9.6E-42 3.3E-46 357.3 25.4 321 33-436 14-369 (440)
26 3vcn_A Mannonate dehydratase; 100.0 3.9E-42 1.3E-46 359.1 22.0 312 42-437 21-357 (425)
27 4h1z_A Enolase Q92ZS5; dehydra 100.0 9.9E-42 3.4E-46 354.9 23.7 305 38-436 19-359 (412)
28 1wue_A Mandelate racemase/muco 100.0 2E-42 6.8E-47 357.6 18.0 293 44-434 19-325 (386)
29 3dgb_A Muconate cycloisomerase 100.0 7.6E-42 2.6E-46 352.6 22.2 299 45-435 6-321 (382)
30 4dwd_A Mandelate racemase/muco 100.0 1.4E-41 4.8E-46 351.5 24.0 306 44-436 2-317 (393)
31 3sbf_A Mandelate racemase / mu 100.0 1.8E-41 6.2E-46 351.9 24.1 310 44-436 5-330 (401)
32 1tkk_A Similar to chloromucona 100.0 9.3E-42 3.2E-46 350.3 21.1 296 45-435 1-312 (366)
33 3v3w_A Starvation sensing prot 100.0 2.5E-41 8.7E-46 352.8 24.7 310 44-436 22-355 (424)
34 4e4u_A Mandalate racemase/muco 100.0 6.1E-41 2.1E-45 348.7 26.8 317 45-436 1-328 (412)
35 3r4e_A Mandelate racemase/muco 100.0 2.1E-41 7E-46 353.1 22.9 309 44-436 16-349 (418)
36 2ovl_A Putative racemase; stru 100.0 5.6E-41 1.9E-45 345.1 25.7 297 44-436 1-313 (371)
37 3i4k_A Muconate lactonizing en 100.0 3.8E-41 1.3E-45 347.5 24.5 301 44-436 5-322 (383)
38 2qgy_A Enolase from the enviro 100.0 6.6E-41 2.3E-45 346.8 26.4 301 44-436 10-322 (391)
39 3jva_A Dipeptide epimerase; en 100.0 1E-41 3.6E-46 348.3 19.9 292 45-435 1-309 (354)
40 4h83_A Mandelate racemase/muco 100.0 3.8E-41 1.3E-45 348.0 24.2 299 44-437 19-333 (388)
41 2chr_A Chloromuconate cycloiso 100.0 9.4E-41 3.2E-45 343.3 26.5 298 45-435 1-315 (370)
42 3rr1_A GALD, putative D-galact 100.0 4.4E-41 1.5E-45 348.9 23.2 301 44-436 1-305 (405)
43 3bjs_A Mandelate racemase/muco 100.0 6.5E-41 2.2E-45 350.4 24.6 298 44-437 38-358 (428)
44 4e5t_A Mandelate racemase / mu 100.0 7E-41 2.4E-45 347.7 24.5 320 45-436 2-335 (404)
45 1rvk_A Isomerase/lactonizing e 100.0 5.3E-41 1.8E-45 346.6 23.4 304 45-437 1-324 (382)
46 3sjn_A Mandelate racemase/muco 100.0 5.2E-41 1.8E-45 345.5 22.7 301 44-437 2-322 (374)
47 1nu5_A Chloromuconate cycloiso 100.0 3.3E-41 1.1E-45 346.7 21.0 299 45-436 1-316 (370)
48 2p8b_A Mandelate racemase/muco 100.0 1.3E-41 4.3E-46 349.7 17.8 299 45-438 1-314 (369)
49 3r0u_A Enzyme of enolase super 100.0 4.8E-41 1.7E-45 345.9 21.7 295 44-434 2-314 (379)
50 1wuf_A Hypothetical protein LI 100.0 6.4E-42 2.2E-46 354.6 15.0 293 44-434 19-325 (393)
51 3i6e_A Muconate cycloisomerase 100.0 3E-41 1E-45 348.4 20.0 296 44-435 7-319 (385)
52 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 4.5E-42 1.5E-46 353.9 13.8 306 44-440 2-340 (377)
53 3tj4_A Mandelate racemase; eno 100.0 6.5E-41 2.2E-45 344.6 22.3 301 45-436 1-321 (372)
54 2qde_A Mandelate racemase/muco 100.0 7.4E-41 2.5E-45 347.1 22.6 298 45-436 3-317 (397)
55 2zad_A Muconate cycloisomerase 100.0 2.8E-41 9.7E-46 344.0 18.8 293 44-436 1-311 (345)
56 3tcs_A Racemase, putative; PSI 100.0 1.3E-40 4.4E-45 343.6 23.8 300 44-437 22-327 (388)
57 3toy_A Mandelate racemase/muco 100.0 9.7E-41 3.3E-45 344.2 22.2 295 44-436 26-335 (383)
58 2ps2_A Putative mandelate race 100.0 9.5E-41 3.2E-45 343.4 22.0 295 44-436 3-316 (371)
59 3cyj_A Mandelate racemase/muco 100.0 7.4E-41 2.5E-45 344.3 20.9 290 44-437 5-312 (372)
60 3mkc_A Racemase; metabolic pro 100.0 9.8E-41 3.4E-45 345.5 21.2 309 44-437 9-334 (394)
61 1sjd_A N-acylamino acid racema 100.0 1.5E-40 5.1E-45 341.5 22.3 293 45-436 1-309 (368)
62 1chr_A Chloromuconate cycloiso 100.0 7.2E-41 2.5E-45 344.1 19.9 299 45-436 1-316 (370)
63 3my9_A Muconate cycloisomerase 100.0 2.8E-41 9.6E-46 347.9 16.5 298 44-436 5-319 (377)
64 3ik4_A Mandelate racemase/muco 100.0 7.6E-41 2.6E-45 343.1 19.3 295 44-436 4-316 (365)
65 4e4f_A Mannonate dehydratase; 100.0 2.5E-40 8.4E-45 345.4 23.5 310 44-437 22-358 (426)
66 3mwc_A Mandelate racemase/muco 100.0 6.7E-40 2.3E-44 339.8 26.5 312 44-446 6-340 (400)
67 3s5s_A Mandelate racemase/muco 100.0 8.5E-41 2.9E-45 345.3 19.4 296 44-436 4-317 (389)
68 3ugv_A Enolase; enzyme functio 100.0 1.3E-40 4.5E-45 344.0 20.7 298 44-436 27-341 (390)
69 2og9_A Mandelate racemase/muco 100.0 3.7E-40 1.3E-44 341.4 23.7 299 44-437 12-330 (393)
70 3mqt_A Mandelate racemase/muco 100.0 2.1E-40 7.3E-45 343.1 21.8 309 44-437 4-329 (394)
71 3q45_A Mandelate racemase/muco 100.0 2.2E-40 7.6E-45 340.1 21.7 294 45-435 1-311 (368)
72 3dip_A Enolase; structural gen 100.0 5E-40 1.7E-44 341.8 24.5 324 44-436 3-340 (410)
73 3ozy_A Putative mandelate race 100.0 2.8E-40 9.6E-45 341.7 22.0 299 44-437 2-324 (389)
74 1r0m_A N-acylamino acid racema 100.0 1.1E-40 3.6E-45 343.5 18.6 292 44-435 7-314 (375)
75 3ddm_A Putative mandelate race 100.0 4.3E-40 1.5E-44 340.4 23.2 298 44-437 9-328 (392)
76 3u9i_A Mandelate racemase/muco 100.0 2.4E-41 8.2E-46 349.7 13.7 300 44-436 26-346 (393)
77 3stp_A Galactonate dehydratase 100.0 1.9E-40 6.4E-45 344.8 20.2 302 44-437 22-353 (412)
78 3qld_A Mandelate racemase/muco 100.0 8.4E-41 2.9E-45 345.2 17.4 298 45-440 1-319 (388)
79 2p3z_A L-rhamnonate dehydratas 100.0 3.3E-40 1.1E-44 343.0 22.0 271 63-437 71-346 (415)
80 3dg3_A Muconate cycloisomerase 100.0 3.3E-40 1.1E-44 338.8 21.6 295 45-436 1-312 (367)
81 3ro6_B Putative chloromuconate 100.0 5.2E-41 1.8E-45 343.4 15.5 296 45-436 1-313 (356)
82 2gdq_A YITF; mandelate racemas 100.0 6.7E-40 2.3E-44 338.3 22.4 295 44-438 3-312 (382)
83 1mdl_A Mandelate racemase; iso 100.0 6.8E-40 2.3E-44 335.6 22.2 296 44-437 3-312 (359)
84 4dxk_A Mandelate racemase / mu 100.0 5.8E-40 2E-44 340.4 21.6 322 45-437 1-338 (400)
85 4a35_A Mitochondrial enolase s 100.0 7E-40 2.4E-44 343.1 22.3 301 44-433 4-371 (441)
86 4e8g_A Enolase, mandelate race 100.0 1.1E-39 3.7E-44 337.2 23.4 297 44-437 22-336 (391)
87 2qdd_A Mandelate racemase/muco 100.0 9.1E-40 3.1E-44 336.9 21.2 295 45-437 3-315 (378)
88 2nql_A AGR_PAT_674P, isomerase 100.0 2.3E-39 7.8E-44 335.0 24.2 296 45-436 3-335 (388)
89 2zc8_A N-acylamino acid racema 100.0 3.8E-40 1.3E-44 338.7 18.2 291 45-435 1-307 (369)
90 3fv9_G Mandelate racemase/muco 100.0 2.4E-39 8.3E-44 334.2 24.3 301 44-437 2-321 (386)
91 3gd6_A Muconate cycloisomerase 100.0 1.2E-39 4.2E-44 337.0 22.1 303 45-436 1-315 (391)
92 3eez_A Putative mandelate race 100.0 1.8E-39 6.1E-44 334.5 23.0 296 44-437 2-315 (378)
93 3ekg_A Mandelate racemase/muco 100.0 5.6E-39 1.9E-43 331.8 25.6 273 62-437 59-335 (404)
94 4dye_A Isomerase; enolase fami 100.0 1.8E-39 6E-44 336.2 21.0 298 44-435 23-335 (398)
95 3go2_A Putative L-alanine-DL-g 100.0 6.3E-39 2.1E-43 333.5 22.9 319 44-437 2-338 (409)
96 3fxg_A Rhamnonate dehydratase; 100.0 8.6E-39 2.9E-43 333.7 23.9 273 62-437 65-340 (455)
97 2rdx_A Mandelate racemase/muco 100.0 1.2E-38 4E-43 328.7 24.6 293 45-435 3-311 (379)
98 2pgw_A Muconate cycloisomerase 100.0 6.9E-39 2.4E-43 331.0 22.5 294 44-436 3-318 (384)
99 3vdg_A Probable glucarate dehy 100.0 5.4E-39 1.8E-43 336.3 19.9 318 33-435 14-362 (445)
100 3vc5_A Mandelate racemase/muco 100.0 1.1E-38 3.7E-43 333.8 21.5 306 44-435 22-357 (441)
101 1tzz_A Hypothetical protein L1 100.0 4.8E-39 1.7E-43 333.0 17.6 300 44-437 5-340 (392)
102 2hxt_A L-fuconate dehydratase; 100.0 1.8E-38 6E-43 333.5 19.5 288 44-420 1-353 (441)
103 4h2h_A Mandelate racemase/muco 100.0 1.1E-37 3.8E-42 321.0 22.8 299 44-439 9-324 (376)
104 3va8_A Probable dehydratase; e 100.0 4.1E-38 1.4E-42 329.6 19.1 305 44-435 26-360 (445)
105 3p3b_A Mandelate racemase/muco 100.0 2.3E-38 7.9E-43 327.8 13.6 294 44-438 11-330 (392)
106 3mzn_A Glucarate dehydratase; 100.0 1.2E-37 4.1E-42 326.9 18.5 310 44-436 4-357 (450)
107 2hzg_A Mandelate racemase/muco 100.0 1.5E-38 5.1E-43 330.2 11.3 301 45-436 3-323 (401)
108 3p0w_A Mandelate racemase/muco 100.0 7.5E-38 2.6E-42 329.7 16.6 310 44-436 7-375 (470)
109 3pfr_A Mandelate racemase/muco 100.0 2.6E-37 8.8E-42 324.8 20.2 314 40-436 4-360 (455)
110 4g8t_A Glucarate dehydratase; 100.0 7.4E-37 2.5E-41 322.4 21.1 326 33-435 14-376 (464)
111 3ijl_A Muconate cycloisomerase 100.0 4.2E-37 1.4E-41 312.2 15.9 270 61-440 26-302 (338)
112 2oz8_A MLL7089 protein; struct 100.0 2.2E-36 7.5E-41 312.7 16.2 291 45-437 3-312 (389)
113 3v5c_A Mandelate racemase/muco 100.0 9.3E-36 3.2E-40 307.8 19.1 289 44-436 11-330 (392)
114 2okt_A OSB synthetase, O-succi 100.0 4.4E-35 1.5E-39 298.0 10.6 273 45-435 2-290 (342)
115 1jpd_X L-Ala-D/L-Glu epimerase 100.0 4.7E-34 1.6E-38 288.3 11.9 277 46-435 3-294 (324)
116 1r6w_A OSB synthase, O-succiny 100.0 6.8E-31 2.3E-35 264.9 12.0 264 46-436 2-284 (322)
117 4gfi_A Mandelate racemase/muco 100.0 6.2E-30 2.1E-34 258.7 18.9 268 61-442 30-299 (329)
118 2ozt_A TLR1174 protein; struct 100.0 3.1E-30 1.1E-34 261.1 10.8 284 61-467 28-325 (332)
119 3caw_A O-succinylbenzoate synt 100.0 1.2E-28 4.3E-33 249.2 12.8 236 61-433 26-268 (330)
120 2opj_A O-succinylbenzoate-COA 99.9 8E-22 2.7E-26 198.8 11.3 137 260-437 108-248 (327)
121 4f9k_A CAMP-dependent protein 98.0 3.5E-06 1.2E-10 67.0 3.6 40 3-42 40-79 (95)
122 2kyg_A CAMP-dependent protein 97.2 9.7E-05 3.3E-09 52.7 1.4 42 2-43 5-46 (50)
123 3g36_A Protein DPY-30 homolog; 97.1 0.00053 1.8E-08 49.7 4.8 40 2-42 8-47 (55)
124 2izx_A CAMP-dependent protein 97.1 0.0004 1.4E-08 47.3 3.4 35 9-43 4-38 (41)
125 2izy_A CAMP-dependent protein 96.8 0.00052 1.8E-08 49.7 2.5 39 5-43 3-41 (54)
126 3noy_A 4-hydroxy-3-methylbut-2 95.8 0.044 1.5E-06 54.5 10.3 131 314-465 44-176 (366)
127 3hgj_A Chromate reductase; TIM 91.5 0.78 2.7E-05 45.7 10.0 68 312-381 235-315 (349)
128 4din_B CAMP-dependent protein 90.4 0.0027 9.3E-08 64.4 -9.5 41 3-43 18-58 (381)
129 1z41_A YQJM, probable NADH-dep 88.9 1.1 3.6E-05 44.5 8.3 68 312-381 225-304 (338)
130 1ydn_A Hydroxymethylglutaryl-C 85.4 2.3 7.9E-05 41.1 8.4 123 312-445 22-177 (295)
131 3kru_A NADH:flavin oxidoreduct 84.8 3.3 0.00011 41.1 9.3 67 312-381 226-304 (343)
132 1zco_A 2-dehydro-3-deoxyphosph 84.8 8.9 0.0003 36.4 12.0 93 316-419 73-166 (262)
133 1ps9_A 2,4-dienoyl-COA reducta 82.5 2.8 9.7E-05 45.3 8.3 68 312-381 224-307 (671)
134 3lab_A Putative KDPG (2-keto-3 82.2 1 3.4E-05 41.9 3.9 108 314-442 23-138 (217)
135 3l5l_A Xenobiotic reductase A; 81.2 3 0.0001 41.7 7.4 67 313-381 243-322 (363)
136 1vr6_A Phospho-2-dehydro-3-deo 80.7 17 0.00057 36.1 12.5 91 316-417 156-247 (350)
137 3nvt_A 3-deoxy-D-arabino-heptu 78.1 10 0.00035 38.1 10.2 92 317-419 193-285 (385)
138 4g9p_A 4-hydroxy-3-methylbut-2 76.2 3.9 0.00014 41.2 6.3 103 315-427 37-153 (406)
139 4e38_A Keto-hydroxyglutarate-a 75.7 3.1 0.00011 38.9 5.2 108 314-442 44-153 (232)
140 1i4n_A Indole-3-glycerol phosp 75.4 7.5 0.00026 36.8 7.8 96 313-419 61-158 (251)
141 2wqp_A Polysialic acid capsule 75.3 5 0.00017 39.9 6.8 94 313-418 88-181 (349)
142 1vyr_A Pentaerythritol tetrani 73.5 3.6 0.00012 41.2 5.3 66 313-381 248-320 (364)
143 3aty_A Tcoye, prostaglandin F2 73.1 2.8 9.6E-05 42.2 4.4 66 312-381 262-333 (379)
144 1vs1_A 3-deoxy-7-phosphoheptul 72.6 11 0.00038 36.1 8.3 93 316-419 88-181 (276)
145 4af0_A Inosine-5'-monophosphat 71.6 3.4 0.00011 43.4 4.6 113 344-475 311-434 (556)
146 3tsm_A IGPS, indole-3-glycerol 71.2 14 0.00048 35.3 8.7 110 313-440 79-193 (272)
147 3eeg_A 2-isopropylmalate synth 69.9 7.6 0.00026 38.1 6.7 144 312-458 24-186 (325)
148 3ivs_A Homocitrate synthase, m 68.7 22 0.00075 36.2 10.0 130 311-444 56-201 (423)
149 3rmj_A 2-isopropylmalate synth 68.5 13 0.00046 37.1 8.2 144 312-458 30-192 (370)
150 3g8r_A Probable spore coat pol 68.5 10 0.00036 37.6 7.3 91 314-416 76-166 (350)
151 2nwr_A 2-dehydro-3-deoxyphosph 67.7 18 0.00061 34.4 8.6 96 314-420 59-155 (267)
152 3sz8_A 2-dehydro-3-deoxyphosph 67.5 15 0.0005 35.4 7.9 94 314-418 75-169 (285)
153 1vli_A Spore coat polysacchari 65.4 7.9 0.00027 39.0 5.7 94 313-418 98-192 (385)
154 1nvm_A HOA, 4-hydroxy-2-oxoval 63.5 16 0.00055 36.0 7.6 125 311-445 25-171 (345)
155 3fs2_A 2-dehydro-3-deoxyphosph 63.3 13 0.00044 36.0 6.6 95 314-419 96-191 (298)
156 2qkf_A 3-deoxy-D-manno-octulos 63.1 16 0.00055 35.0 7.3 95 315-420 71-166 (280)
157 3gr7_A NADPH dehydrogenase; fl 61.7 13 0.00043 36.8 6.4 68 312-381 225-304 (340)
158 3tml_A 2-dehydro-3-deoxyphosph 61.6 13 0.00044 35.9 6.2 94 315-419 73-173 (288)
159 2cw6_A Hydroxymethylglutaryl-C 61.1 20 0.00067 34.5 7.6 129 311-444 22-177 (298)
160 1ydo_A HMG-COA lyase; TIM-barr 58.7 36 0.0012 32.9 9.0 131 311-446 23-180 (307)
161 2ztj_A Homocitrate synthase; ( 57.6 42 0.0014 33.5 9.6 125 311-441 20-162 (382)
162 1o60_A 2-dehydro-3-deoxyphosph 57.5 20 0.00069 34.5 6.9 94 315-419 74-168 (292)
163 1pii_A N-(5'phosphoribosyl)ant 56.8 13 0.00044 38.2 5.7 96 313-419 68-165 (452)
164 3tnp_B CAMP-dependent protein 56.8 2.3 7.8E-05 43.2 0.0 34 10-43 7-40 (416)
165 3ffs_A Inosine-5-monophosphate 56.6 12 0.00041 37.8 5.4 110 343-475 173-296 (400)
166 1icp_A OPR1, 12-oxophytodienoa 55.7 5 0.00017 40.3 2.3 66 313-381 253-327 (376)
167 4ab4_A Xenobiotic reductase B; 55.6 22 0.00077 35.3 7.1 64 315-381 241-305 (362)
168 3igs_A N-acetylmannosamine-6-p 54.9 28 0.00097 32.2 7.3 112 312-440 32-153 (232)
169 3gka_A N-ethylmaleimide reduct 54.5 24 0.00083 35.0 7.2 64 315-381 249-313 (361)
170 3ble_A Citramalate synthase fr 54.3 30 0.001 33.9 7.8 129 312-444 37-190 (337)
171 3usb_A Inosine-5'-monophosphat 52.0 16 0.00055 38.2 5.5 98 336-445 278-390 (511)
172 3q58_A N-acetylmannosamine-6-p 51.9 40 0.0014 31.1 7.8 112 312-440 32-153 (229)
173 4avf_A Inosine-5'-monophosphat 51.0 17 0.00057 37.8 5.5 106 328-445 239-363 (490)
174 3hv2_A Response regulator/HD d 51.0 99 0.0034 25.1 9.7 103 260-402 21-128 (153)
175 2gou_A Oxidoreductase, FMN-bin 47.9 22 0.00075 35.3 5.6 67 312-381 246-319 (365)
176 3qja_A IGPS, indole-3-glycerol 47.7 14 0.00048 35.2 4.0 113 313-443 72-189 (272)
177 3f4w_A Putative hexulose 6 pho 47.5 37 0.0013 30.3 6.7 118 314-443 11-134 (211)
178 2ftp_A Hydroxymethylglutaryl-C 45.8 46 0.0016 31.9 7.5 129 311-444 25-180 (302)
179 4a29_A Engineered retro-aldol 44.5 41 0.0014 31.8 6.5 93 313-418 64-160 (258)
180 3ewb_X 2-isopropylmalate synth 43.6 50 0.0017 31.6 7.3 134 311-447 22-174 (293)
181 1wa3_A 2-keto-3-deoxy-6-phosph 40.4 68 0.0023 28.3 7.3 108 314-443 20-131 (205)
182 1wv2_A Thiazole moeity, thiazo 40.1 94 0.0032 29.4 8.2 114 312-441 83-214 (265)
183 4fo4_A Inosine 5'-monophosphat 40.1 21 0.00071 35.6 4.0 109 344-475 138-261 (366)
184 2r14_A Morphinone reductase; H 38.9 24 0.00083 35.2 4.3 67 312-381 251-325 (377)
185 2c6q_A GMP reductase 2; TIM ba 38.8 24 0.00081 34.9 4.1 92 343-446 149-255 (351)
186 4fxs_A Inosine-5'-monophosphat 36.2 40 0.0014 35.0 5.5 94 340-445 257-365 (496)
187 3glc_A Aldolase LSRF; TIM barr 34.4 54 0.0018 31.6 5.8 50 396-445 156-211 (295)
188 1vhc_A Putative KHG/KDPG aldol 32.9 1.3E+02 0.0046 27.4 8.0 107 314-442 27-136 (224)
189 3fdb_A Beta C-S lyase, putativ 32.3 1E+02 0.0034 29.4 7.5 93 315-417 90-189 (377)
190 2rjn_A Response regulator rece 31.6 2E+02 0.0069 23.1 8.6 102 261-402 15-121 (154)
191 1vc4_A Indole-3-glycerol phosp 31.0 50 0.0017 30.9 4.9 91 313-417 65-160 (254)
192 3fsl_A Aromatic-amino-acid ami 30.3 1.4E+02 0.0048 28.7 8.3 98 315-418 104-213 (397)
193 3dzz_A Putative pyridoxal 5'-p 29.4 1.1E+02 0.0037 29.3 7.2 97 315-417 94-199 (391)
194 3khj_A Inosine-5-monophosphate 28.3 42 0.0015 33.2 4.0 90 344-445 135-238 (361)
195 3kcn_A Adenylate cyclase homol 28.2 2.3E+02 0.0079 22.7 8.3 78 314-401 35-117 (151)
196 1w8s_A FBP aldolase, fructose- 27.9 48 0.0016 31.2 4.1 54 397-450 124-186 (263)
197 1rqb_A Transcarboxylase 5S sub 27.2 99 0.0034 32.4 6.7 122 312-444 43-196 (539)
198 3r2g_A Inosine 5'-monophosphat 27.2 76 0.0026 31.4 5.6 61 317-381 100-166 (361)
199 4dq6_A Putative pyridoxal phos 27.0 1.2E+02 0.0042 28.9 7.2 95 315-417 99-203 (391)
200 2hsa_B 12-oxophytodienoate red 26.8 39 0.0013 34.0 3.4 66 313-381 257-345 (402)
201 2r6o_A Putative diguanylate cy 26.7 69 0.0024 30.5 5.1 121 317-451 130-272 (294)
202 3o1n_A 3-dehydroquinate dehydr 26.4 2.5E+02 0.0084 26.5 8.9 127 313-448 49-201 (276)
203 2v82_A 2-dehydro-3-deoxy-6-pho 25.9 3.3E+02 0.011 23.8 9.6 107 314-442 17-127 (212)
204 1o94_A Tmadh, trimethylamine d 25.7 1.7E+02 0.0058 31.5 8.6 39 342-381 279-318 (729)
205 2cu0_A Inosine-5'-monophosphat 25.6 20 0.0007 37.0 1.1 89 344-446 258-360 (486)
206 3t7v_A Methylornithine synthas 23.6 1.8E+02 0.0062 27.9 7.6 115 312-431 90-223 (350)
207 2yci_X 5-methyltetrahydrofolat 23.4 1.9E+02 0.0066 27.2 7.5 112 314-438 32-162 (271)
208 2m1l_A Cyclin-dependent kinase 23.4 47 0.0016 24.6 2.3 31 440-472 5-37 (69)
209 3jte_A Response regulator rece 22.9 2.8E+02 0.0094 21.8 9.8 103 261-402 11-118 (143)
210 2vp8_A Dihydropteroate synthas 22.8 58 0.002 31.7 3.7 97 311-422 60-171 (318)
211 3dxi_A Putative aldolase; TIM 22.4 5E+02 0.017 24.9 10.4 139 311-458 19-178 (320)
212 3k13_A 5-methyltetrahydrofolat 22.3 2.5E+02 0.0085 26.9 8.1 55 351-419 81-141 (300)
213 3l8a_A METC, putative aminotra 21.9 79 0.0027 31.1 4.7 96 315-416 128-232 (421)
214 1t3i_A Probable cysteine desul 21.8 1.7E+02 0.0058 28.1 7.1 97 315-418 99-206 (420)
215 3f9t_A TDC, L-tyrosine decarbo 21.5 1E+02 0.0035 29.4 5.3 84 329-418 123-208 (397)
216 1ypf_A GMP reductase; GUAC, pu 21.3 1.6E+02 0.0054 28.5 6.6 107 326-445 114-241 (336)
217 3dyd_A Tyrosine aminotransfera 21.1 67 0.0023 31.8 3.9 95 314-418 126-231 (427)
218 1sfl_A 3-dehydroquinate dehydr 20.9 3.5E+02 0.012 24.7 8.6 128 314-448 15-167 (238)
219 3k30_A Histamine dehydrogenase 20.7 2.5E+02 0.0085 29.9 8.6 67 312-381 240-321 (690)
220 3gt7_A Sensor protein; structu 20.5 3.3E+02 0.011 21.8 8.1 102 260-402 14-122 (154)
No 1
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=9.1e-116 Score=897.59 Aligned_cols=428 Identities=53% Similarity=0.845 Sum_probs=415.6
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
|++|++|.+|+|+||||+|||+|+|+|++|.+|+++|||+|||.+||.++||+++.+|.|+|+.+||++||+.|+|+|+|
T Consensus 1 m~~I~~i~areildSrGnpTvEv~v~~~~G~~ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Lig 80 (452)
T 3otr_A 1 MVVIKDIVAREILDSRGNPTIEVDVSTEGGVFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALLG 80 (452)
T ss_dssp CCCCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CCcceEEEEEEEEcCCCCEEEEEEEEECCccEEEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHH-hhhccCC-----CCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCC--CcccccceEEee
Q 011677 124 MDPILQSQIDQAMI-DLDKTEK-----KGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKT--NLTLPVPAFTVI 195 (479)
Q Consensus 124 ~d~~~~~~id~~l~-~~~~~~~-----~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~--~~~~Pvp~~~~i 195 (479)
+|+.||++||+.|. ++|||+| ++++|+||+.|||+|+|+|+|+.+|+|||+|||++.+.. ...+|+|++|+|
T Consensus 81 ~d~~dQ~~iD~~m~~~lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nvi 160 (452)
T 3otr_A 81 KDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVI 160 (452)
T ss_dssp CCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEE
T ss_pred CChHhHHHHHHHHHHHhcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEEe
Confidence 99999999999999 9999999 999999999999999999999999999999999876555 578999999999
Q ss_pred cCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHh
Q 011677 196 SGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINR 275 (479)
Q Consensus 196 ~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~ 275 (479)
|||+|++|++++|||||+|.++.+++|+++++.|+|++||++|+.|||...++|||||||+|++++.+++|++|.+|+++
T Consensus 161 nGG~ha~n~l~~QEfmi~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~t~vgDEGgfap~~~~~~eaL~ll~~Ai~~ 240 (452)
T 3otr_A 161 NGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKA 240 (452)
T ss_dssp ECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCCcCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCce---eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 276 TGIPSSKW---SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 276 ~g~~~~~i---iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+||+ ++| +|||+| ||+.++|+|+++|++|++++++.+|++|++++|.+|+++|||.||||||+++||++|++|++
T Consensus 241 aGy~-~~i~i~lD~Aasefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~ 319 (452)
T 3otr_A 241 AGYE-GKIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTK 319 (452)
T ss_dssp HTCT-TTSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHH
T ss_pred cCCC-ceEEEccccchHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHH
Confidence 9998 665 999999 99877899999999988777778999999999999999999999999999999999999999
Q ss_pred hh---hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 352 IC---QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 352 ~~---~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++ +||+|||+++||+++++++++.++||++ +||++|+|||||+++++++|+++|+.||+||+||||+|+++
T Consensus 320 ~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~I------lIKvnQIGgITEalka~~lA~~~G~~vmvshrSGETeD~~i 393 (452)
T 3otr_A 320 DVGEKTQVIGDDILVTNILRIEKALKDKACNCL------LLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFI 393 (452)
T ss_dssp HHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHH
T ss_pred hhCCCeEEEeCccccCCHHHHHHHHhcCCCCEE------EeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchhHH
Confidence 98 9999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccccCC
Q 011677 429 ADLSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDYRQC 478 (479)
Q Consensus 429 ~dlAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 478 (479)
+|||||++++|||+|+|||+||++||||||||||||++.++|+|++||+|
T Consensus 394 AdLaVgl~~gqIKtGap~rsER~aKyNqLlrIeeelg~~a~~~g~~~~~~ 443 (452)
T 3otr_A 394 ADLVVGLRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGESFRHP 443 (452)
T ss_dssp HHHHHHTTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGTTSC
T ss_pred HHHHHHcCCCccccCCCcchhHHHHHHHHHHHHHHhCccceecccccCCC
Confidence 99999999999999999999999999999999999999999999999987
No 2
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-114 Score=889.19 Aligned_cols=428 Identities=52% Similarity=0.830 Sum_probs=413.5
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
.|.|++|.+|+|+||||+|||+|+|+|++|.+|+++|||+|||.+||.++||+|+.+|.|+|+.+|+++||+.|+|+|+|
T Consensus 5 ~m~I~~i~ar~ildsrGnptvev~v~~~~g~~ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~~vn~~iap~Lig 84 (441)
T 3qtp_A 5 SMSIQKVHAREILDSRGNPTIEVEITTGKGMFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLG 84 (441)
T ss_dssp TTBCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEEECCCCCEEEEEEEEECCCcEEEecccCCCCCcceeEeecCCCcccccCccHHHHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+|+.||++||+.|.++|+|+|++++|+||+.|||+|+|+|+|+.+|+|||+|||++.+.....+|+|++|+||||+|++|
T Consensus 85 ~~~~dQ~~iD~~m~~lDgT~nks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~~nvinGG~ha~n 164 (441)
T 3qtp_A 85 KNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGN 164 (441)
T ss_dssp CBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEEEEEEECGGGCSS
T ss_pred CChhhHHHHHHHHHhccCCCCccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccceEeeecCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999976656677999999999999999999
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW 283 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i 283 (479)
++++|||||+|.++.+++|+++++.|+|++||++|+.|||...++|||||||+|++++.+++|++|.+|++++||+ ++|
T Consensus 165 ~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~t~vgdEGgfap~~~~~~eaL~ll~~Ai~~aGy~-~~i 243 (441)
T 3qtp_A 165 ALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYT-GKI 243 (441)
T ss_dssp SCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCSSHHHHHHHHHHHHHHHTCT-TTC
T ss_pred ccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCcccCCCCCCHHHHHHHHHHHHHHcCCC-ceE
Confidence 9999999999999999999999999999999999999999888999999999999999999999999999999998 665
Q ss_pred ---eecccc-cccccCceeeccCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh--hh
Q 011677 284 ---SDCKSS-MHNIYSTKYDLDFKSP--NKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC--QQ 355 (479)
Q Consensus 284 ---iD~aa~-~~~~~~g~Y~~~~~~~--~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~ 355 (479)
+|||+| ||+.++|+|+++|++| ++|++..+|++|++++|.+++++|||.||||||+++||++|++|++++ +|
T Consensus 244 ~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~ 323 (441)
T 3qtp_A 244 EIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQ 323 (441)
T ss_dssp EEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSE
T ss_pred EEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCce
Confidence 999999 9976579999999887 556666889999999999999999999999999999999999999998 99
Q ss_pred hhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhc
Q 011677 356 VVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGL 435 (479)
Q Consensus 356 I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~ 435 (479)
|+|||+++||+++++++++.++||++ +||++|+|||||+++++++|+++|+.+|+||++|||+|++++|||||+
T Consensus 324 IvGDEl~vTn~~~i~~~Ie~~a~n~I------lIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgETeDt~iAdLAVal 397 (441)
T 3qtp_A 324 IVGDDLLVTNPARVQMAMDKNACNSV------LIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFIADLVVGL 397 (441)
T ss_dssp EEESTTTTTCHHHHHHHHHHTCCSEE------EECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHT
T ss_pred EEeccccccCHHHHHHHHHcCCCCEE------EecccccccHHHHHHHHHHHHHcCCeEEEeCCCCCccHhHHHHHHHHh
Confidence 99999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccccCCC
Q 011677 436 ASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDYRQCL 479 (479)
Q Consensus 436 ~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 479 (479)
+++|||+|+|||+||++||||||||||||+. ++|+|++||+|.
T Consensus 398 ~~gqIKtGap~rseR~aKyNqLlrIeeelg~-a~~~g~~~~~~~ 440 (441)
T 3qtp_A 398 NCKQIKTGAPCRSERLCKYNQLMRIEEELGN-IPYAGKNWRNST 440 (441)
T ss_dssp TCEEEECCCSCSHHHHHHHHHHHHHHHHHSS-CCBCTTCCBCCC
T ss_pred CCCccccCCCcchhHHHHHHHHHHHHHHhCc-CeecccccccCC
Confidence 9999999999999999999999999999998 999999999984
No 3
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=1e-99 Score=789.07 Aligned_cols=411 Identities=43% Similarity=0.696 Sum_probs=383.1
Q ss_pred ceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 45 SVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
.+|++|.+|+|+||+|+|||+|+|+|++|++ ++++|||+|||.+||.++||+|+++|.|+++.++++.|++.|+|.|+|
T Consensus 3 ~~i~~~~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~LiG 82 (428)
T 3tqp_A 3 ATITDINAHEILDSRANPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALLG 82 (428)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred ceEEEEEEEEEEcCCCCCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+|++||+.|.+++++++++++|.||++|||+||||++||.+|+|||+||||. ..+.++|+|+|++++||.|+++
T Consensus 83 ~d~~~~~~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG~--~~~~~~pvp~~~~inGG~ha~~ 160 (428)
T 3tqp_A 83 QDPRSQEEIDRIMIELDGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLGGD--GGPFSMPVPMMNIINGGAHATN 160 (428)
T ss_dssp CCTTCHHHHHHHHHHHHCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTT--TCCCCBCEEEEEEEECC----C
T ss_pred CCccCHHHHHHHHHHhcCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhCCC--CCCceeeeEEEEEecCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999972 2245799999999999999999
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCC-c
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSS-K 282 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~-~ 282 (479)
++++||||++|.++.+++++++++.++|+++|..|+.| | ..+++|++|+|.|++++++++|+.+.+|++++||+++ +
T Consensus 161 ~~~~qefmi~P~ga~~~~ea~~~~~egy~~lK~~l~~~-g-~~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G~d 238 (428)
T 3tqp_A 161 NLDFQEFMIVPVGAPTFAEALRYGAEVFHALKKRLVSR-G-LMSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPGKD 238 (428)
T ss_dssp CCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTT
T ss_pred ccchhHHhhcCcchhhHHHHHHHHHHHHHhHhhhhccc-c-cccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccCCc
Confidence 99999999999999999999999999999999999877 6 4789999999999998889999999999999998764 4
Q ss_pred e---eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---hh
Q 011677 283 W---SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---QQ 355 (479)
Q Consensus 283 i---iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~~ 355 (479)
+ +|+|+| || ++|+|+++ ++.||++|+++++.+++++|||.||||||+++|+++|++|++++ +|
T Consensus 239 v~l~vD~aase~~--~~g~Y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ 308 (428)
T 3tqp_A 239 IYLALDAASSELY--QNGRYDFE--------NNQLTSEEMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQ 308 (428)
T ss_dssp BEEEEECCGGGSE--ETTEECCS--------SSCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSE
T ss_pred eEEEEecchhhhc--cCCceecc--------ccccCHHHHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcc
Confidence 4 999999 99 57999985 36899999999998889999999999999999999999999998 56
Q ss_pred hhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhc
Q 011677 356 VVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGL 435 (479)
Q Consensus 356 I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~ 435 (479)
|+|||++++++++++++++.+++|++ +||++|+|||||+++++++|+++|+++|+||++|||+|++++|||||+
T Consensus 309 ivGDel~vt~~~~~~~~i~~~a~d~i------~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~iadLaVa~ 382 (428)
T 3tqp_A 309 LVGDDIFVTNPDILEKGIKKNIANAI------LVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIADLAVAT 382 (428)
T ss_dssp EEESTTTTTCHHHHHHHHHTTCCSEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHT
T ss_pred eeccccccCCHHHHHHHHHhCCCCEE------EecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHc
Confidence 78999988999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccc
Q 011677 436 ASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDY 475 (479)
Q Consensus 436 ~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~ 475 (479)
+++|||+|+|+|+||++||||||||||||++.++|+|++.
T Consensus 383 ~~~~ik~G~p~r~er~akyn~llriee~l~~~~~~~~~~~ 422 (428)
T 3tqp_A 383 DARQIKTGSLCRSDRVAKYNRLLQIERELNDQAPYAGKEA 422 (428)
T ss_dssp TCEEEECCCSSSHHHHHHHHHHHHHHHHHTTSSCBCGGGG
T ss_pred CCCcccCCCCcchhHHHHHhHHHHHHHHhCcccEecCccc
Confidence 9999999999999999999999999999999999999753
No 4
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=6.5e-100 Score=794.12 Aligned_cols=414 Identities=45% Similarity=0.727 Sum_probs=390.7
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV 122 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li 122 (479)
.|+|++|++|+|+||+|+|||+|+|+|++|++ ++++|||+|||.+||.++||+++++|.|+++.++++.|++.|+|.|+
T Consensus 25 ~m~I~~i~~r~i~dsrg~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av~~v~~~iap~Li 104 (449)
T 3uj2_A 25 YLEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILS 104 (449)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHT
T ss_pred ceEEEEEEEEEEECCCCCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 123 GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 123 G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
|+||.+|++||+.|.+++++++++++|.||++|||+||||++||.+|+|||+|||| ..+.++|+|+|++++||.|++
T Consensus 105 G~d~~~~e~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG---~~~~~lpvp~~n~inGG~ha~ 181 (449)
T 3uj2_A 105 GMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLGG---LNANRLPVPMMNILNGGAHAA 181 (449)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHG---GGCCBCCEECEEEEECSTTSS
T ss_pred cCCccCHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhCC---CCCCceeeeeEEEecCcccCC
Confidence 99999999999999999999999999999999999999999999999999999998 445789999999999999999
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCC-
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSS- 281 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~- 281 (479)
+++++||||++|.++.+++++++++.++|+++|..||.| | ..+++|++|+|.|+++++++.|++|++|++++||+++
T Consensus 182 ~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~-g-~~t~vGdeggfap~~~~~~e~l~~i~~AIr~agy~~G~ 259 (449)
T 3uj2_A 182 NTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSK-G-LATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPGR 259 (449)
T ss_dssp SSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-T-CCCCBCTTSCBCCCCSCHHHHHHHHHHHHHHTTCCBTT
T ss_pred CccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhc-C-CccccCCCCCcCCCccCHHHHHHHHHHHHHHhccccCC
Confidence 999999999999999999999999999999999999877 6 5689999999999998899999999999999998764
Q ss_pred ce---eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---h
Q 011677 282 KW---SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---Q 354 (479)
Q Consensus 282 ~i---iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~ 354 (479)
++ +|+|++ ||+.++|+|+++ + .++.||++|+++++++++++|||.||||||+++|+++|++|++++ +
T Consensus 260 dv~l~vD~aase~~~~~~g~Y~l~--~----~~~~~t~~eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~i 333 (449)
T 3uj2_A 260 DFVLAMDAASSEWKGEKKGEYILP--K----CKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKI 333 (449)
T ss_dssp TBEEEEECCGGGCBCSSTTEEECT--T----TCCEEEHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTS
T ss_pred ceEEEEEcchhhhccccCceeecc--C----cccccCHHHHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCc
Confidence 44 999999 997667999975 2 125789999999998889999999999999999999999999998 7
Q ss_pred hhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhh
Q 011677 355 QVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVG 434 (479)
Q Consensus 355 ~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~ 434 (479)
||+|||+++||+++++++++.+++|++ +||++|+|||||+++++++|+++|+++|+||++|||+|++++|||||
T Consensus 334 pI~gDE~~~tn~~~~~~~i~~~a~d~i------~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~iadLaVa 407 (449)
T 3uj2_A 334 QLVGDDLFVTNTERLNKGIKERCGNSI------LIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVA 407 (449)
T ss_dssp EEEESTTTTTCHHHHHHHHHTTCCSEE------EECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHH
T ss_pred eEECCcceeCCHHHHHHHHHcCCCCEE------EECccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHH
Confidence 899999988889999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCcc
Q 011677 435 LASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGED 474 (479)
Q Consensus 435 ~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~ 474 (479)
++++|||+|+|+|+||++||||||||||||++.++|+|+.
T Consensus 408 ~~~~~ik~G~~~r~er~akyn~llriee~l~~~~~~~~~~ 447 (449)
T 3uj2_A 408 LNTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAVYPGFT 447 (449)
T ss_dssp TTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGCBCCGGG
T ss_pred hCCCcccCCCCchhhHHHHHHHHHHHHHHhccccEeCCcc
Confidence 9999999999999999999999999999999999999975
No 5
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=1.8e-99 Score=784.87 Aligned_cols=406 Identities=42% Similarity=0.664 Sum_probs=385.5
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV 122 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li 122 (479)
|++|++|++|+|+||+|+|||+|+|+|++|.+ ++++|||+|||.+||.++||++ ++|.|+++.+++++|++.|+|.|+
T Consensus 4 ~~~i~~i~~r~i~dsrG~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~-~~y~gkgv~~av~~v~~~iap~Li 82 (417)
T 3qn3_A 4 MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDND-ERFGGKGVLKAVANVNETIADEIL 82 (417)
T ss_dssp CSBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCS-TGGGGTCCHHHHHHHHTHHHHHHT
T ss_pred CceeeEEEEEEEEcCCCCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCC-ccccCccHHHHHHHHHHHHHHHHC
Confidence 66899999999999999999999999999987 9999999999999999999999 899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 123 GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 123 G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
|+||.+|++||+.|.+++++++++++|+||++|||+||||++||.+|+|||+|||| ..+.++|+|++++++||.|++
T Consensus 83 G~d~~~~~~id~~m~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLGG---~~~~~lPv~~~nvinGG~ha~ 159 (417)
T 3qn3_A 83 GLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLGG---ANASILPVPMCNIINGGAHAN 159 (417)
T ss_dssp TSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHG---GGCCEECEEEEEEEECGGGSS
T ss_pred CCCccCHHHHHHHHHHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhCC---CCCcceeeeeeeeecCcccCC
Confidence 99999999999999999999999999999999999999999999999999999998 446799999999999999999
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCC-
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSS- 281 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~- 281 (479)
+++++||||++|.++.+++++++++.|+|+++|..|+.| |. .+++|++|+|.|+++++++.++.|.+|++++|++|+
T Consensus 160 ~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~k-g~-~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy~~dv 237 (417)
T 3qn3_A 160 NNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANS-GH-STALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRV 237 (417)
T ss_dssp SSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTCTTTE
T ss_pred CcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhc-Cc-ccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999987 64 689999999999998889999999999999998742
Q ss_pred ce-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---hhh
Q 011677 282 KW-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---QQV 356 (479)
Q Consensus 282 ~i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~~I 356 (479)
.| +|+|++ || ++|+|+++ ++.||++|++++|++++++|||.||||||+++|+++|++|++++ +||
T Consensus 238 ~l~vD~~ase~~--~~g~y~l~--------~~~~t~~eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI 307 (417)
T 3qn3_A 238 KIALDVASTEFF--KDGKYHME--------GKAFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQL 307 (417)
T ss_dssp EEEEECCGGGGE--ETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEE
T ss_pred eEEEECCchhhc--cCCeeecC--------CCccCHHHHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCce
Confidence 45 999999 99 47999985 25789999999999989999999999999999999999999998 899
Q ss_pred hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcC
Q 011677 357 VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLA 436 (479)
Q Consensus 357 ~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~ 436 (479)
+|||+++||+++++++++.+++|++ +||++|+|||||+++++++|+++|+.+|+||++|||+|++++|||||++
T Consensus 308 ~gDE~~~tn~~~~~~~i~~~a~d~i------~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~iadlava~~ 381 (417)
T 3qn3_A 308 VGDDLFVTNEDILREGIIKKMANAV------LIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALN 381 (417)
T ss_dssp EESTTTTTCHHHHHHHHHHTCCSEE------EECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTT
T ss_pred ecCCcccCCHHHHHHHHHhCCCCEE------EecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHHHHHHHhC
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCcc
Q 011677 437 SGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGED 474 (479)
Q Consensus 437 ~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~ 474 (479)
++|||+|+|+|+||++||||||||||||++ |.|.+
T Consensus 382 ~~~ik~G~~~r~er~akyn~llriee~l~~---~~~~~ 416 (417)
T 3qn3_A 382 TGQIKTGALARGERTAKYNRLLEIEFESDE---YLGEK 416 (417)
T ss_dssp CSEEECCCSCSHHHHHHHHHHHHHTTTCCE---ECTTC
T ss_pred CCccccCCCcchhHHHHHHHHHHHHHHhcc---ccccC
Confidence 999999999999999999999999999973 55654
No 6
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=5.5e-97 Score=772.26 Aligned_cols=424 Identities=52% Similarity=0.845 Sum_probs=400.5
Q ss_pred eeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc--C
Q 011677 46 VITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV--G 123 (479)
Q Consensus 46 ~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li--G 123 (479)
.|++|++|+|+||+|+|+|+|+|+|++|+.++++|+|+|||.+|+.+++|+++.+|.|+++.++++.|++.|+|.|+ |
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~G 80 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKAN 80 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHT
T ss_pred CeeEEEEEEEEcCCCCcEEEEEEEECCceEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHCC
Confidence 48999999999999999999999999993388999999999999999999999999999999999999999999999 9
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCC--CcccccceEEeecCCccC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKT--NLTLPVPAFTVISGGKHA 201 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~--~~~~Pvp~~~~i~GG~~~ 201 (479)
+||.+|++||+.|.+++++.+++++++||++||||||||++||.+|+|||+|||.+.|.. +.++|+|+|++++||.|+
T Consensus 81 ~d~~~~~~i~~~m~~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~inGg~ha 160 (436)
T 2al1_A 81 IDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHA 160 (436)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGGS
T ss_pred CChhhHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEeecCcccc
Confidence 999999999999999999988899999999999999999999999999999999211144 568999999999999999
Q ss_pred CCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCC
Q 011677 202 GNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSS 281 (479)
Q Consensus 202 ~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~ 281 (479)
++++++||||++|.++.+++++++++.++|+++|..|+.|+|...+++|++|+|.|+.++++++++.|+++++++|++ +
T Consensus 161 ~~~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~-g 239 (436)
T 2al1_A 161 GGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHD-G 239 (436)
T ss_dssp SSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCT-T
T ss_pred CCccccccceecCcccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCC-c
Confidence 999999999999999999999999999999999999999988766889999999999988999999999999999985 4
Q ss_pred c--e-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhh
Q 011677 282 K--W-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQV 356 (479)
Q Consensus 282 ~--i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I 356 (479)
+ | +|++++ || ++++|+++|++|+++.++.||++|++++|.+++++|||.||||||+++||++|++|++++ +||
T Consensus 240 ~v~l~vD~aase~~--~n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI 317 (436)
T 2al1_A 240 KVKIGLDCASSEFF--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQI 317 (436)
T ss_dssp TCEEEEECCGGGGE--ETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEE
T ss_pred ceEEEEechhhhhc--cCCceEEecccccccccccCCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeE
Confidence 4 4 999999 99 578999988776555668899999999999999999999999999999999999999999 999
Q ss_pred hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcC
Q 011677 357 VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLA 436 (479)
Q Consensus 357 ~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~ 436 (479)
+|||+++||+++++++++.+++|++ +||++|+|||||+++++++|+++|+.+|+||+++||+|++++|||||++
T Consensus 318 ~gDE~~vt~~~~~~~~i~~~a~d~i------~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~~ 391 (436)
T 2al1_A 318 VADDLTVTNPKRIATAIEKKAADAL------LLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLR 391 (436)
T ss_dssp EESTTTTTCHHHHHHHHHTTCCSEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTT
T ss_pred EECCcccCCHHHHHHHHHhCCCCEE------EechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHhc
Confidence 9999988899999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccccCC
Q 011677 437 SGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDYRQC 478 (479)
Q Consensus 437 ~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 478 (479)
++|||+|+|+|+||++||||||||||||++.++|+|++|++|
T Consensus 392 ~~~ik~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 433 (436)
T 2al1_A 392 TGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHG 433 (436)
T ss_dssp CSEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGCTTG
T ss_pred CCcCcCCCCccchHHHHHHHHHHHHHHhccccEeCccccCCC
Confidence 999999999999999999999999999999999999999886
No 7
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=2.1e-96 Score=768.50 Aligned_cols=423 Identities=58% Similarity=0.952 Sum_probs=400.1
Q ss_pred eeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc--C
Q 011677 46 VITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV--G 123 (479)
Q Consensus 46 ~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li--G 123 (479)
+|++|++|+|+||+|+|+|+|+|+|++|+.++++|+|+|||++||.+++|+++.+|.|+++.+++..|++.|+|.|+ |
T Consensus 1 ~I~~v~~r~i~dsrg~~tv~V~V~t~~G~G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~G 80 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKGLFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSG 80 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTEEEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHC
T ss_pred CeeEEEEEEEEcCCCCceEEEEEEECCCceEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhCC
Confidence 48999999999999999999999999998788999999999999999999988899999999999999999999999 9
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+|++||+.|.+++++.+++++++||++|||+||||++||.+|+|||+|||.+.|..+.++|+|++++++||.|+++
T Consensus 81 ~d~~~~~~i~~~m~~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~inGg~ha~~ 160 (439)
T 2akz_A 81 LSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGN 160 (439)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSSS
T ss_pred CChhhHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEecCcccccc
Confidence 99999999999999999998889999999999999999999999999999999922114456899999999999999999
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCc-
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSK- 282 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~- 282 (479)
++++||||++|.++.+++++++++.++|+++|..|+.|+|...+++|++|+|.|++++++++++.|+++++++|++ ++
T Consensus 161 ~~~~qefmi~p~~a~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~-g~v 239 (439)
T 2akz_A 161 KLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYT-EKI 239 (439)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCT-TTC
T ss_pred ccccccceecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCc-cce
Confidence 9999999999999999999999999999999999999999777889999999999888999999999999999985 44
Q ss_pred -e-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhc
Q 011677 283 -W-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVG 358 (479)
Q Consensus 283 -i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~g 358 (479)
| +|++++ || ++++|++++++| .+.++.||++|++++|.+++++|||.||||||+++||++|++|++++ +||+|
T Consensus 240 ~l~vD~a~se~~--~~g~y~l~~~~~-~~~~~~~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~g 316 (439)
T 2akz_A 240 VIGMDVAASEFY--RDGKYDLDFKSP-TDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVG 316 (439)
T ss_dssp EEEEECCGGGGE--ETTEECTTTTSS-CCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEE
T ss_pred EEEEechHhhhc--cCCeeEEecccc-ccccccCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEe
Confidence 4 999999 98 478999987665 44567899999999999999999999999999999999999999999 99999
Q ss_pred CCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCC
Q 011677 359 DDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASG 438 (479)
Q Consensus 359 de~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~ 438 (479)
||+++||+++++++++.+++|++ +||++|+|||||+++++++|+++|+.+|+||+++||+|++++|||||++++
T Consensus 317 DE~~vt~~~~~~~~i~~~a~d~i------~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~~ 390 (439)
T 2akz_A 317 DDLTVTNPKRIERAVEEKACNCL------LLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTG 390 (439)
T ss_dssp STTTTTCHHHHHHHHHTTCCSEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCS
T ss_pred CCCccCCHHHHHHHHHhCCCCEE------EechhhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcCC
Confidence 99988899999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccccCC
Q 011677 439 QIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDYRQC 478 (479)
Q Consensus 439 ~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 478 (479)
|||+|+|+|+||++||||||||||+|++++.|+|++||+|
T Consensus 391 ~ik~G~~~r~er~~kyn~llriee~l~~~~~~~~~~~~~~ 430 (439)
T 2akz_A 391 QIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNP 430 (439)
T ss_dssp EEECCCSCSHHHHHHHHHHHHHHHHHGGGCCBCGGGTTCG
T ss_pred cccCCCCccchhHHHHHHHHHHHHHhccCcEecCccCCCc
Confidence 9999999999999999999999999999999999999986
No 8
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=8.3e-90 Score=719.44 Aligned_cols=422 Identities=51% Similarity=0.812 Sum_probs=390.4
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV 122 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li 122 (479)
||+|++|++++|++++++|+|+|+|+|++| + ++.+|+++|||.+|+.+++|+++++|.|+++.+++..|++.|+|.|+
T Consensus 3 ~m~I~~i~~~~v~~~~~~p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li 81 (432)
T 2ptz_A 3 HMTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALI 81 (432)
T ss_dssp TTSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCEEEEEEEEEEecCCCCcEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999999 6 88999999999999999999998999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 123 GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 123 G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
|+||.+|++||+.|.+++++.++++++.||++|||+||||++||.+|+|||+|||.+.|..+.++|+|+|++++||.|++
T Consensus 82 G~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~~~~i~gg~~a~ 161 (432)
T 2ptz_A 82 GRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAG 161 (432)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEECSTTSS
T ss_pred CCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeEEEEecCccccc
Confidence 99999999999999999998888899999999999999999999999999999992111444579999999999999999
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCC-C
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPS-S 281 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~-~ 281 (479)
+.+++||+|++|.++.+++++++++.++|+++|..++.|+|...+++|++|+|.|+++++++.++.+.+|++++|++. .
T Consensus 162 ~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~Air~~G~~g~v 241 (432)
T 2ptz_A 162 NALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKF 241 (432)
T ss_dssp SSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTTSC
T ss_pred CCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHHHHHHhCCcCCc
Confidence 999999999999999999999999999999999999888887668999999999988878889998788998899841 3
Q ss_pred ce-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---hhh
Q 011677 282 KW-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---QQV 356 (479)
Q Consensus 282 ~i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~~I 356 (479)
.| +|+|++ ||+..+++|++.++.+ +++.|++++++++|.+++++|||.||||||+++|+++|++|++++ +||
T Consensus 242 ~l~vDan~~~~~~~~~~~y~~~~~~~---~~~~~~a~~~~~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI 318 (432)
T 2ptz_A 242 AICMDCAASETYDEKKQQYNLTFKSP---EPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQI 318 (432)
T ss_dssp EEEEECCGGGGEETTTTEEETTTTSS---SCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEE
T ss_pred EEEEECcccccccccCceeEeecccc---ccCCCCHHHHHHHHHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeE
Confidence 45 999999 8864458998843211 025689999999999999999999999999999999999999997 899
Q ss_pred hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcC
Q 011677 357 VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLA 436 (479)
Q Consensus 357 ~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~ 436 (479)
+|||++++|+++++++++.+++|++ +||++|+|||||+++++++|+++|+++|+||+++||++++++|||||++
T Consensus 319 ~gDe~~v~~~~~~~~~i~~~a~d~i------~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~a~lava~~ 392 (432)
T 2ptz_A 319 VGDDLTVTNTERIKMAIEKKACNSL------LLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALG 392 (432)
T ss_dssp EESTTTTTCHHHHHHHHHTTCCSEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHT
T ss_pred EecCcccCCHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHHHHHHHHhC
Confidence 9999888899999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccc
Q 011677 437 SGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDY 475 (479)
Q Consensus 437 ~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~ 475 (479)
++|+|+|+|+|+||++||||||||||+|++.++|+|++|
T Consensus 393 ~~~ik~G~~~r~er~~kyn~llrie~~l~~~~~~~~~~~ 431 (432)
T 2ptz_A 393 SGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKFGFPGW 431 (432)
T ss_dssp CSEEECCSSCSHHHHHHHHHHHHHHHHHCTTCEESCGGG
T ss_pred CCCCCCCCCccchhHHHHHHHHHHHHHhccCcCccCCCC
Confidence 999999999999999999999999999999999999886
No 9
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=8.4e-84 Score=675.32 Aligned_cols=415 Identities=47% Similarity=0.733 Sum_probs=386.9
Q ss_pred ceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 45 SVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
|+|++|++++|+||+|+++|+|+|+|++|++ ++++|+++++|..|+.+++|+++++|.|+++.+++..|++.|+|.|+|
T Consensus 1 ~~I~~v~~~~v~~srg~~~v~V~v~td~G~~Gge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~~~i~~~l~p~LiG 80 (431)
T 2fym_A 1 SKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIG 80 (431)
T ss_dssp CBEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTT
T ss_pred CeeEEEEEEEEEcCCCCeeEEEEEEECCCCccceecCcccccCcccceeccCCcccccccccHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999987 778999999999999999999989999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcc----cccceEEeecCCc
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLT----LPVPAFTVISGGK 199 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~----~Pvp~~~~i~GG~ 199 (479)
+||.++++||+.|.++++++++++++.+|++|||+||||++||.+|+|||+||||. .+.+ +|+|+|++++||.
T Consensus 81 ~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~---~~~~~~~~~pv~~~~~~~gg~ 157 (431)
T 2fym_A 81 KDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAEL---NGTPGKYSMPVPMMNIINGGE 157 (431)
T ss_dssp SBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHH---TTCTTCCCCCEECEEEEECGG
T ss_pred CCHHHHHHHHHHHHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhcCc---ccccccccccceeEeeccCcc
Confidence 99999999999999988888888899999999999999999999999999999984 2334 9999999999999
Q ss_pred cCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCC
Q 011677 200 HAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIP 279 (479)
Q Consensus 200 ~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~ 279 (479)
|+++++++++||++|.++..++++++++.++|+++|..++.| |. ..++|++|+|.|+++++.++|++||++++++|++
T Consensus 158 ~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~-g~-~~kvG~~gg~~~~~~~d~~~l~~vreai~~~g~~ 235 (431)
T 2fym_A 158 HADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAK-GM-NTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYE 235 (431)
T ss_dssp GSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCC
T ss_pred ccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhc-Cc-ccccCcccCCCCCccchHHHHHHHHHHHHHhccC
Confidence 999999999999999889999999999999999999999876 63 3789999999999998999999999999999998
Q ss_pred CC-c--e-eecccc-cccccCceeeccCCCCCCCCC-CCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh
Q 011677 280 SS-K--W-SDCKSS-MHNIYSTKYDLDFKSPNKSGQ-NFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC 353 (479)
Q Consensus 280 ~~-~--i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~-~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~ 353 (479)
|+ + | +|+++| ||+ +++|++..+ + +.||.+++++++.++.++|+|.||||||+++|+++|++|++++
T Consensus 236 ~G~dv~l~vDaaas~~~~--~~~Y~~~~~------n~~~~t~~~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~ 307 (431)
T 2fym_A 236 LGKDITLAMDCAASEFYK--DGKYVLAGE------GNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVL 307 (431)
T ss_dssp BTTTBEEEEECCGGGGEE--TTEEEEGGG------TTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHH
T ss_pred CCCccEEEEeechhhccc--cCceeeccC------CCCCCCHHHHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHh
Confidence 63 3 4 999999 994 799998632 3 6799999999988865559999999999999999999999987
Q ss_pred ---hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHH
Q 011677 354 ---QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIAD 430 (479)
Q Consensus 354 ---~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~d 430 (479)
+||++||++++++++++++++.+++|++ +||++|+|||||+++++++|+++|+++|++|+++||++++++|
T Consensus 308 ~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i------~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~ 381 (431)
T 2fym_A 308 GDKIQLVGDDLFVTNTKILKEGIEKGIANSI------LIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIAD 381 (431)
T ss_dssp TTTSEEEESTTTTTCHHHHHHHHHTTCCSEE------EECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHH
T ss_pred CCCCeEEeCCcccCCHHHHHHHHHhCCCCEE------EECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHH
Confidence 8999999667889999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccC-ccccCC
Q 011677 431 LSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAG-EDYRQC 478 (479)
Q Consensus 431 lAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~-~~~~~~ 478 (479)
||++++++|+|+|+|+|+||++|||||||||++|++++.|.| ++||++
T Consensus 382 la~a~~~~~i~~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 430 (431)
T 2fym_A 382 LAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQ 430 (431)
T ss_dssp HHHHTTCEEEECCCSCSHHHHHHHHHHHHHHHHHGGGSCCCGGGGSTTC
T ss_pred HHHhcCCCccccCCCccchHHHHHHHHHHHHHHhccCceecChhhccCC
Confidence 999999999999999999999999999999999999999999 779876
No 10
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=3e-83 Score=672.81 Aligned_cols=421 Identities=43% Similarity=0.708 Sum_probs=383.0
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV 122 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li 122 (479)
|..|++|++|+|+||+|+|+|+|+|+|++|++ ++++|+++++|..|+.+++|+++++|.|+++.+++..|++.|+|.|+
T Consensus 11 ~~~i~~~~~r~i~dsrg~~~v~V~V~td~G~~Gge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~~i~~~l~p~Li 90 (444)
T 1w6t_A 11 MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII 90 (444)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT
T ss_pred hhhcceeEEEEEEcCCCCceEEEEEEECCCCEeeEecccccccccceeeeeccCcccccccccHHHHHHHHHHHHHHHHc
Confidence 77899999999999999999999999999988 66789999999999999999999999999999999999989999999
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 123 GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 123 G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
|+||.++++||+.|.+++++.++++++.+|++|||+||||++||.+|+|||+|||| ..+.++|+|++++++||.|++
T Consensus 91 G~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG---~~~~~vp~~~~~~~~gg~~a~ 167 (444)
T 1w6t_A 91 GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLGG---FNTKVLPTPMMNIINGGSHSD 167 (444)
T ss_dssp TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHC---TTCCEECEECEEEEECGGGCS
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCcccccccccceeccccccc
Confidence 99999999999999988888777888899999999999999999999999999998 345689999999999999999
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCC-
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSS- 281 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~- 281 (479)
+++++||||++|.+..+++++++++.++|+++|..++.| |. .+++|++|+|.++++++.++|++||++++++||.|+
T Consensus 168 ~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~k-g~-~~kvG~~gg~~~~~~~d~~~l~avreav~~agy~pG~ 245 (444)
T 1w6t_A 168 APIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR-GL-ETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGK 245 (444)
T ss_dssp SSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHT-TC-CCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTT
T ss_pred cccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhc-CC-ccccCCCCCCCCchHhHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999989999999999999999999999887 64 378999999999998899999999999999998863
Q ss_pred c--e-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---h
Q 011677 282 K--W-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---Q 354 (479)
Q Consensus 282 ~--i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~ 354 (479)
+ | +|+|+| ||+.++++|+++ ++.+. ....||++|+++++.+++++|+|.||||||+++|+++|++|++++ +
T Consensus 246 dv~L~vDaaas~~~~~~n~~y~~~-~n~~~-~~~~~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~i 323 (444)
T 1w6t_A 246 DVFLGFDCASSEFYDKERKVYDYT-KFEGE-GAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKV 323 (444)
T ss_dssp TBEEEEECCGGGGBC--CCCEETH-HHHCT-TCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTS
T ss_pred CcEEEEEccchhcccccCCceeec-cccCc-ccCCCCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCC
Confidence 3 4 999999 996558889862 11000 002389999999998877789999999999999999999999987 8
Q ss_pred hhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhh
Q 011677 355 QVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVG 434 (479)
Q Consensus 355 ~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~ 434 (479)
||++||++++++++++++++.+++|++ +||++|+|||||+++++++|+++|+++|+||+++||.+++++|||++
T Consensus 324 pIa~dE~~~~~~~~~~~~i~~~a~d~i------~ik~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a~lava 397 (444)
T 1w6t_A 324 QLVGDDFFVTNTDYLARGIQEGAANSI------LIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVA 397 (444)
T ss_dssp EEEESTTTTTCHHHHHHHHHHTCCSEE------EECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHH
T ss_pred eEEeCCcccCCHHHHHHHHHcCCCCEE------EEcccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHHHHHh
Confidence 999999867889999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccC-ccccC
Q 011677 435 LASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAG-EDYRQ 477 (479)
Q Consensus 435 ~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~-~~~~~ 477 (479)
++++++|+|+|+|+||++||||||||||+|++++.|.| ++|++
T Consensus 398 ~~~~~i~~G~~~r~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~ 441 (444)
T 1w6t_A 398 TNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLKSFYN 441 (444)
T ss_dssp TTCCEEECCCSSSHHHHHHHHHHHHHHHHHGGGCEECGGGGCTT
T ss_pred cCCCcccCCCCcccccHHHHHHHHHHHHHhccccccCChhhhcc
Confidence 99999999999999999999999999999999999999 77864
No 11
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.3e-81 Score=654.57 Aligned_cols=415 Identities=48% Similarity=0.757 Sum_probs=387.7
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCce-eeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhc
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMF-RASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALV 122 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~-~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~Li 122 (479)
+|+|++|+++.+.+++|+++|+|+|+|++|++ .+++|++++||.+|+.+++|+++ +|.|+++.+++..|++.|+|.|+
T Consensus 8 ~MkI~~i~~~~v~~s~g~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~-~~~g~~~~~~~~~i~~~l~p~Li 86 (427)
T 2pa6_A 8 RFEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEK-RFGGKGVLMAVENVNSIIRPEIL 86 (427)
T ss_dssp GGBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSS-GGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCEEEEEEEEEEEcCCCCceEEEEEEECCCCeeeEecccccccCcceeEeecCCcc-ccccccHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999987 77899999999999999999985 99999999999999989999999
Q ss_pred CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 123 GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 123 G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
|+||.++++||+.|.+++++.++++++.+|++|||+||||+.||.+|+|||+|||| ..+.++|+|++++++||.|++
T Consensus 87 G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLGg---~~~~~vp~~~~~~~~gg~~~~ 163 (427)
T 2pa6_A 87 GYDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLGG---FNSYVMPVPMMNVINGGKHAG 163 (427)
T ss_dssp TCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHC---SCCCEECEECEEEEECSTTTS
T ss_pred CCCHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhcC---ccccccccchhcccccccccc
Confidence 99999999999999988777766778889999999999999999999999999998 345689999999999999998
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCC-C
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPS-S 281 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~-~ 281 (479)
+++++||+|+.|.++..++++.++..++|+++|..++.|+|...+++|++|+|.|+++++.++++.||++++.+|+++ .
T Consensus 164 ~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~~G~~~~~ 243 (427)
T 2pa6_A 164 NDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDEV 243 (427)
T ss_dssp SSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCTTTC
T ss_pred CCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHHhCCCCCc
Confidence 999999999999889999999999999999999999889898778899999999888888999999999998888731 4
Q ss_pred ce-eecccc-cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhc
Q 011677 282 KW-SDCKSS-MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVG 358 (479)
Q Consensus 282 ~i-iD~aa~-~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~g 358 (479)
.| +|++++ || +|+.|+++ ++.||++|+++++.+++++|+|.|||||++++|+++|++|++++ +||++
T Consensus 244 ~L~vDa~as~~~--~n~~~~~~--------n~~~~~~~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~ 313 (427)
T 2pa6_A 244 VFALDAAASEFY--KDGYYYVE--------GKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVG 313 (427)
T ss_dssp EEEEECCGGGGE--ETTEEEET--------TEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEE
T ss_pred EEEEEcchhccc--cCCceeec--------CCCCCHHHHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEe
Confidence 56 999999 99 48999875 36899999999988789999999999999999999999999999 99999
Q ss_pred CCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCC
Q 011677 359 DDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASG 438 (479)
Q Consensus 359 de~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~ 438 (479)
||++++++++++++++.+++|++ +||++|+||||++++++++|+++|+++|+||+++||.+++++||+++..++
T Consensus 314 dE~~~~~~~~~~~~i~~~a~d~i------~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~ 387 (427)
T 2pa6_A 314 DDLFVTNVERLRKGIEMKAANAL------LLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSG 387 (427)
T ss_dssp STTTTTCHHHHHHHHHHTCCSEE------EECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCS
T ss_pred CccccCCHHHHHHHHHhCCCCEE------EEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCC
Confidence 99878889999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccccCCC
Q 011677 439 QIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDYRQCL 479 (479)
Q Consensus 439 ~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~~~~~ 479 (479)
++|+|+|+|+||++||||||||||+|++ ++|+|++|++|+
T Consensus 388 ~~~~G~~~~~er~~kyn~llri~~~~~~-~~~~~~~~~~~~ 427 (427)
T 2pa6_A 388 QIKTGAPARGERTAKYNQLIRIEQELGL-SKYAGRNFRCPF 427 (427)
T ss_dssp EEECCSSCSHHHHHHHHHHHHHHHHSSS-CEECGGGCSCCC
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHhcc-cccccccccCCC
Confidence 9999999999999999999999999998 999999898875
No 12
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=1.5e-48 Score=406.29 Aligned_cols=327 Identities=15% Similarity=0.115 Sum_probs=242.4
Q ss_pred ceEEEEEEeCCCceeeecCCCCCCCceeeeeecc-----CCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 011677 62 PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRD-----GDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAM 136 (479)
Q Consensus 62 ~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d-----~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l 136 (479)
++++|+|+|++|++ |+||+.++.. .+ +.|.+++ ....+++.++|.|+|+|+.+++++|+.|
T Consensus 51 ~~v~V~v~td~G~~----------G~GE~~~~~~sGa~~r~-~~~~~~~---~~~~i~~~l~p~LiG~d~~~~~~i~~~l 116 (413)
T 1kko_A 51 ECVSVQLILENGAV----------AVGDCAAVQYSGAGGRD-PLFLAEH---FIPFLNDHIKPLLEGRDVDAFLPNARFF 116 (413)
T ss_dssp EEEEEEEEETTSCE----------EEEEECCCTTTTSTTCC-CCCCHHH---HHHHHHHHTHHHHTTCBCSCSHHHHHHH
T ss_pred ceEEEEEEECCCCE----------EEEEecccccccccccC-ccccHHH---HHHHHHHHHHHHHcCCChHhHHHHHHHH
Confidence 57999999999985 7777765300 01 3455544 4445677799999999999999999999
Q ss_pred HhhhccCCCCc-hhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccC
Q 011677 137 IDLDKTEKKGE-LGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPI 215 (479)
Q Consensus 137 ~~~~~~~~~~~-~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~ 215 (479)
.... ++++ ...+|++|||+||||+.||..|+|||++|||.....-.+.|+|+|++ ||.|..+
T Consensus 117 ~~~~---~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~l~~~~vp~y~~--~g~~~~~------------ 179 (413)
T 1kko_A 117 DKLR---IDGNLLHTAVRYGLSQALLDATALASGRLKTEVVCDEWQLPCVPEAIPLFGQ--SGDDRYI------------ 179 (413)
T ss_dssp HHCE---ETTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHTTCCCCCCCCCEECC--CTTCTTH------------
T ss_pred Hhhh---cccCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCccccccccCCeEEEEe--cCccccC------------
Confidence 7542 1222 34789999999999999999999999999983211001347888874 4443311
Q ss_pred CCCcHHHHHHHH----HHH-HHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHH----HHHHHHHHHHhcCCCCCce-ee
Q 011677 216 GASSFGEALQMG----SET-YHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIRE----GLDLVKEAINRTGIPSSKW-SD 285 (479)
Q Consensus 216 ~~~~~~ea~~~~----~e~-~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~----~l~~v~~ai~~~g~~~~~i-iD 285 (479)
+.++.++.+ .++ |+.+| .|.| . +.+.+.+ .++.|+...+.+|++ ..+ +|
T Consensus 180 ---~~~~~~~~~~~~~~~G~~~~iK----~KvG-------~------~~~~~~~~l~~d~~~v~aiR~~~G~~-~~L~vD 238 (413)
T 1kko_A 180 ---AVDKMILKGVDVLPHALINNVE----EKLG-------F------KGEKLREYVRWLSDRILSLRSSPRYH-PTLHID 238 (413)
T ss_dssp ---HHHHHHHTTCSEEEETTCCCCC----CCCC-------T------TSHHHHHHHHHHHHHHHHHCSSTTCC-CEEEEE
T ss_pred ---CHHHHHHHHHHHHhCCCccEEE----EecC-------C------ChhhHHHHHHHHHHHHHHHHHhhCCC-CeEEEE
Confidence 122222111 112 43333 3422 1 1111222 123342222345765 566 99
Q ss_pred cccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhC--Cce-eeecCCC----ccCHHHHHHHHhh-----h
Q 011677 286 CKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADY--PIV-SIEDPFD----KEDWEHTKSVLQI-----C 353 (479)
Q Consensus 286 ~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~--~i~-~iEdP~~----~~D~~g~~~L~~~-----~ 353 (479)
+|+ +|.+. ..||.+++++++.+ ++++ ++. |||||++ ++|+++|++|+++ +
T Consensus 239 an~--------~~~~~---------~~~~~~~A~~~~~~-L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~ 300 (413)
T 1kko_A 239 VYG--------TIGLI---------FDMDPVRCAEYIAS-LEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGS 300 (413)
T ss_dssp CTT--------HHHHH---------TTTCHHHHHHHHHH-TGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCC--------ccccc---------cCCCHHHHHHHHHH-HHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCC
Confidence 953 33332 15799999998766 5663 332 9999999 8899999999999 8
Q ss_pred -hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHH
Q 011677 354 -QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIAD 430 (479)
Q Consensus 354 -~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~d 430 (479)
+||++||+ ++++++++++++.+++|++ +||++++||||++++++++|+++|+++|++|+++||.+ ++++|
T Consensus 301 ~ipIa~dE~-~~~~~~~~~~i~~~a~d~i------~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~et~i~~aa~~h 373 (413)
T 1kko_A 301 GVKIVADEW-CNTYQDIVDFTDAGSCHMV------QIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVH 373 (413)
T ss_dssp CCEEEECTT-CCSHHHHHHHHHTTCCSEE------EECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHHH
T ss_pred CCcEEcCCC-CCCHHHHHHHHHhCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCeEEecCCCCCCHHHHHHHHH
Confidence 99999995 5679999999999999999 99999999999999999999999999999888889988 78999
Q ss_pred hHhhcCCCCc--ccCCCCchhHHHHhHHHHHHHHHhC
Q 011677 431 LSVGLASGQI--KAGAPCRGERLAKYNQLLHIEEELG 465 (479)
Q Consensus 431 lAv~~~~~~i--k~G~~~~~er~~kyn~ll~ie~~l~ 465 (479)
||+++++.++ |+|.+.+.+|++|||||+|||++++
T Consensus 374 laaa~~~~~ip~kpG~g~~~~~~~~~n~l~r~~~~~~ 410 (413)
T 1kko_A 374 VALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQ 410 (413)
T ss_dssp HHHHHCCSEEECCSCSSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCcccCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 9999999999 9999999999999999999999875
No 13
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=9.4e-48 Score=400.70 Aligned_cols=331 Identities=15% Similarity=0.155 Sum_probs=243.7
Q ss_pred ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCcccc----ccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Q 011677 62 PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLG----NSVNRAVKNINERISEALVGMDPILQSQIDQAMI 137 (479)
Q Consensus 62 ~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g----~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~ 137 (479)
++++|+|+|++|++ |+||+.++.. +.|++ ++..+++..|++.++|.|+|+||.+++.+|+.|.
T Consensus 51 ~~v~V~v~td~G~~----------G~GE~~~~~~---~g~g~~e~~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i~~~l~ 117 (413)
T 1kcz_A 51 ESISVLLVLEDGQV----------AHGDCAAVQY---SGAGGRDPLFLAKDFIPVIEKEIAPKLIGREITNFKPMAEEFD 117 (413)
T ss_dssp CEEEEEEEETTSCE----------EEEEECCCTT---TTSTTSCSCCCHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHH
T ss_pred cEEEEEEEECCCCE----------EEEEEccccc---cccCcccccccHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHH
Confidence 57999999999984 8888765421 00211 2456777788888999999999999999999995
Q ss_pred hhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCC
Q 011677 138 DLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGA 217 (479)
Q Consensus 138 ~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~ 217 (479)
.... ..++++.+|++|||+||||+.||..|+|||++|||.......+.|+|+|+.. |+.. .. ..+
T Consensus 118 ~~~~--~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~~~~~~vp~~~~~-g~~~----~~--------~~~ 182 (413)
T 1kcz_A 118 KMTV--NGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYNPGAEINAVPVFAQS-GDDR----YD--------NVD 182 (413)
T ss_dssp HCEE--TTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHSTTCCCCCCCEECCC-TTCT----TH--------HHH
T ss_pred hccc--CCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhcccccCcCccCCeeeeEec-Cccc----cC--------CHH
Confidence 4321 1123567899999999999999999999999999832111124577777632 2100 00 001
Q ss_pred CcHHHHHHHHHHH-HHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHH----HHHHHHHHHHhcCCCCCce-eecccc--
Q 011677 218 SSFGEALQMGSET-YHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIRE----GLDLVKEAINRTGIPSSKW-SDCKSS-- 289 (479)
Q Consensus 218 ~~~~ea~~~~~e~-~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~----~l~~v~~ai~~~g~~~~~i-iD~aa~-- 289 (479)
..++++.+...++ |+.+| .|.| .++ ....+ .++.|+...+.+|++ ..+ +|+|++
T Consensus 183 ~~~~~a~~~~~~G~~~~~K----iKvG-------~~~------~~~~~~~~~d~~~v~avR~~~G~~-~~l~vDaN~~~~ 244 (413)
T 1kcz_A 183 KMIIKEADVLPHALINNVE----EKLG-------LKG------EKLLEYVKWLRDRIIKLRVREDYA-PIFHIDVYGTIG 244 (413)
T ss_dssp HHHHTTCSEEEECCCCCCC----CCCC-------TTS------HHHHHHHHHHHHHHHHHCSSTTCC-CEEEEECTTHHH
T ss_pred HHHHHHHHHHHhcchhhee----eccC-------CCc------cchhhHHHHHHHHHHHHHHhcCCC-ceEEEecCCCcc
Confidence 1222333333334 54444 2322 110 01122 345553333445765 566 999542
Q ss_pred -cccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhC--Cce-eeecCCC----ccCHHHHHHHHhh-----h-hh
Q 011677 290 -MHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADY--PIV-SIEDPFD----KEDWEHTKSVLQI-----C-QQ 355 (479)
Q Consensus 290 -~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~--~i~-~iEdP~~----~~D~~g~~~L~~~-----~-~~ 355 (479)
|| .||.+++++++.+ ++++ +|. |||||++ ++|+++|++|+++ + +|
T Consensus 245 ~~~--------------------~~~~~~a~~~~~~-L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ip 303 (413)
T 1kcz_A 245 AAF--------------------DVDIKAMADYIQT-LAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAE 303 (413)
T ss_dssp HHT--------------------TTCHHHHHHHHHH-HHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccc--------------------CCCHHHHHHHHHH-HHhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcCCCCCc
Confidence 11 1689999998766 6777 766 9999995 6699999999999 8 99
Q ss_pred hhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH--HhHh
Q 011677 356 VVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA--DLSV 433 (479)
Q Consensus 356 I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~--dlAv 433 (479)
|++||+ ++++++++++++.+++|++ +||++++||||++++++++|+++|++++++|++.||.+++.+ |||+
T Consensus 304 Ia~dE~-~~~~~~~~~~i~~~a~d~v------~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hlaa 376 (413)
T 1kcz_A 304 LVADEW-CNTVEDVKFFTDNKAGHMV------QIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGM 376 (413)
T ss_dssp EEECTT-CCSHHHHHHHHHTTCSSEE------EECTGGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHH
T ss_pred EEeCCC-cCCHHHHHHHHHhCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEecCCCCCCHHHHHHHHHHHh
Confidence 999997 5679999999999999999 999999999999999999999999999888878899887665 9999
Q ss_pred hcCCCCccc--CCCCchhHHHHhHHHHHHHHHhCC
Q 011677 434 GLASGQIKA--GAPCRGERLAKYNQLLHIEEELGD 466 (479)
Q Consensus 434 ~~~~~~ik~--G~~~~~er~~kyn~ll~ie~~l~~ 466 (479)
++++.+++. |.+++++|+.|||||+|||++|+.
T Consensus 377 a~~~~~i~~~pG~~~~~g~~~~~n~~~r~~~~~~~ 411 (413)
T 1kcz_A 377 ACGARQVLAKPGMGVDEGMMIVKNEMNRVLALVGR 411 (413)
T ss_dssp HHTCSEEECCSSSSSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCceeecCCCCCCcchhhhHHHHHHHHHHHhc
Confidence 999999988 999999999999999999999864
No 14
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=2.2e-46 Score=390.25 Aligned_cols=319 Identities=14% Similarity=0.106 Sum_probs=249.2
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
.|+|++|+++.+. +. .++++|+|+|++| + |+||+ .. +.+..+++..+++ ++|.|+|
T Consensus 5 ~MkI~~i~~~~~~-~~-~~~v~V~v~td~G-~----------G~Ge~-~~---------g~~~~~~~~~i~~-l~p~liG 60 (410)
T 2qq6_A 5 APRITRVETAAIR-AV-GPSVLVRVWAGDE-H----------GLGEC-YP---------SAPAAGIHHIVMN-MEEQLLG 60 (410)
T ss_dssp CCCCCEEEEEEEC-CC--CEEEEEEEETTE-E----------EEEEE-CC---------CSCHHHHHHHHHT-THHHHTT
T ss_pred CceEeEEEEEEEC-CC-CCEEEEEEEECCc-E----------EEEEe-cC---------CCChHHHHHHHHH-HHHHhCC
Confidence 3699999999997 54 4689999999999 7 99998 31 2246777778887 9999999
Q ss_pred CCCCCHHHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeec-C-Ccc
Q 011677 124 MDPILQSQIDQAMIDLD-KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVIS-G-GKH 200 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~-~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~-G-G~~ 200 (479)
+||.+++++|+.|.+.. ++.++++++.+|++|||+||||+.||.+|+|||+|||| .. +.++|+|++++ | +.|
T Consensus 61 ~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg---~~--~~~vp~y~~~~~g~~~h 135 (410)
T 2qq6_A 61 EDPRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGG---AF--RRRVRLYADCNAGTVDA 135 (410)
T ss_dssp CCTTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTTC---CS--CSEEEEEEECCCSEECT
T ss_pred CCccHHHHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCC---Cc--cCceeEEEecccccccc
Confidence 99999999999998754 33355667889999999999999999999999999998 22 44677788776 5 678
Q ss_pred CCCcc-cccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhh----CCCCcccCCCCCCCC--CCCchHHHHHHHHHHH
Q 011677 201 AGNNL-AIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKY----GAHGCNVGEDGGLAP--NISSIREGLDLVKEAI 273 (479)
Q Consensus 201 ~~~~l-~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~----G~~~~~vg~~G~~~~--~~~~~~~~l~~v~~ai 273 (479)
+++.+ ++|++++.| +...+++.+...++|+.+| .|. |..... ++|++.+ .++.+.+.++.||+++
T Consensus 136 ~~~~~~~~~~~~~~~--~~~~~~a~~~~~~Gf~~vK----ik~~~~~G~~~~~--~~G~~~~~~~~~~~~e~v~avRea~ 207 (410)
T 2qq6_A 136 AAHHIEGGLFEEGSN--EEYIAVAREAVERGFDAIK----LDVDDITGPLHRD--FWNGAISPREHEAMVARVAAVREAV 207 (410)
T ss_dssp TCCEEECCTTCSTHH--HHHHHHHHHHHHTTCSEEE----EECCCSSSTTCSC--SSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCH--HHHHHHHHHHHHcCCCEEE----eeccccCCcccCC--cCccccchhhHHHHHHHHHHHHHhc
Confidence 87765 577777654 3455666666667777766 343 321111 3456543 2233456666666665
Q ss_pred HhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhh
Q 011677 274 NRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQI 352 (479)
Q Consensus 274 ~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~ 352 (479)
|.+ ..| +|++ +.||.+++++++ +.+++|+|.|||||++++|+++|++|+++
T Consensus 208 ---G~d-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~~ 259 (410)
T 2qq6_A 208 ---GPE-VEVAIDMH-----------------------GRFDIPSSIRFA-RAMEPFGLLWLEEPTPPENLDALAEVRRS 259 (410)
T ss_dssp ---CSS-SEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHTT
T ss_pred ---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCeEECCCChhhHHHHHHHHhh
Confidence 654 456 8883 256889999886 45899999999999999999999999999
Q ss_pred h-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HHH
Q 011677 353 C-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FIA 429 (479)
Q Consensus 353 ~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~~ 429 (479)
+ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |++. +..+ +.+
T Consensus 260 ~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGite~~~ia~~A~~~g~~~~~-h~~~-s~i~~aa~~ 330 (410)
T 2qq6_A 260 TSTPICAGENVY-TRFDFRELFAKRAVDYV------MPDVAKCGGLAEAKRIANLAELDYIPFAP-HNVS-SPVGTVAAA 330 (410)
T ss_dssp CSSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCBHHHHTHHHHHHHHHHHHHTTTCCBCC-BCCS-CHHHHHHHH
T ss_pred CCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCeEee-cCCC-cHHHHHHHH
Confidence 9 9999999865 69999999999999999 99999999999999999999999999866 6554 5544 556
Q ss_pred HhHhhcC
Q 011677 430 DLSVGLA 436 (479)
Q Consensus 430 dlAv~~~ 436 (479)
|||.++.
T Consensus 331 hlaaa~~ 337 (410)
T 2qq6_A 331 HVCAAVS 337 (410)
T ss_dssp HHHHSCT
T ss_pred HHHHhCC
Confidence 7766653
No 15
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=3.2e-45 Score=380.73 Aligned_cols=315 Identities=18% Similarity=0.171 Sum_probs=241.8
Q ss_pred ceeeEEEEEEEecCCCCc--eEEEEEEeCCCceeeecCCCCCCCceee-eeeccCCCCccccccHHHHHHHHHHHHHHhh
Q 011677 45 SVITKIKARQILDSRGIP--TVEVDLFTHKGMFRASVPSGDPSGMYEA-LELRDGDKGTYLGNSVNRAVKNINERISEAL 121 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~~--~v~V~v~t~~G~~~~~~ps~~~~G~~Ea-~~~~d~~~~~y~g~~~~~av~~i~~~l~p~L 121 (479)
|+|++|+++.+.++.+++ +++|+|+|++|++ |+||+ ... +.+...+...+++ ++|.|
T Consensus 3 MkI~~i~~~~~~~~~~~~~~~v~V~v~td~G~~----------G~Ge~~~~~---------g~~~~~~~~~i~~-l~p~l 62 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGIY----------GLGEAGIAY---------GVGGSAAAGILKD-YAALL 62 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSCE----------EEEEESCSS---------SSCHHHHHHHHHH-HHHHH
T ss_pred CeEEEEEEEEecCCCCCCccceEEEEEeCCCCE----------EEEeecCCC---------CCchHHHHHHHHH-HHHHc
Confidence 799999999998776565 6799999999984 99997 431 2234455666776 99999
Q ss_pred cCCCCCCHHHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEe-ec-C-
Q 011677 122 VGMDPILQSQIDQAMIDLD-KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTV-IS-G- 197 (479)
Q Consensus 122 iG~d~~~~~~id~~l~~~~-~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~-i~-G- 197 (479)
+|+||.+++++|+.|.+.. ++.++++++.+|++|||+||||+.||.+|+|||+|||| .. +-++|+|++ ++ |
T Consensus 63 ~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~~--~~~vp~y~~~i~~g~ 137 (403)
T 2ox4_A 63 IGEDPFNTEAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLGG---KN--REDLRVYASQLQFGW 137 (403)
T ss_dssp TTCCTTCHHHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CS--SSSEEEEEECGGGCS
T ss_pred CCCCHHHHHHHHHHHHHhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcCC---CC--CCceeeeEeeccCCc
Confidence 9999999999999998644 22345667789999999999999999999999999998 32 335777887 66 5
Q ss_pred CccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhh------CCCCcccCCCCCCCC--CCCchHHHHHHH
Q 011677 198 GKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKY------GAHGCNVGEDGGLAP--NISSIREGLDLV 269 (479)
Q Consensus 198 G~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~------G~~~~~vg~~G~~~~--~~~~~~~~l~~v 269 (479)
+.|+++.++++++ .+++.+...++|+.+| .|. |.. -.+..|++.+ +.+.+.+.++.|
T Consensus 138 ~~~~~~~~~~e~~---------~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~g~~~~~~~~~~~e~v~av 202 (403)
T 2ox4_A 138 GKERKSKGRKEEY---------AEEALKAVAEGYDAVK----VDVLAHDRNGSR--EGVFLEGPLPSETIKIGVERVEAI 202 (403)
T ss_dssp SSSCCCCCSHHHH---------HHHHHHHHHTTCSEEE----ECCSSSCTTSCC--TTCCCSSSCCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHH---------HHHHHHHHHcCCCEEE----EeccccCCcccc--ccCcccCCCchHHHHHHHHHHHHH
Confidence 6777776665543 4566666667777776 332 211 0112233322 112234555555
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
|+++ |.+ ..| +|++ +.||.++++++++ .+++|+|.|||||++++|+++|++
T Consensus 203 r~av---G~d-~~l~vDan-----------------------~~~~~~~ai~~~~-~l~~~~i~~iE~P~~~~d~~~~~~ 254 (403)
T 2ox4_A 203 RNAV---GPD-VDIIVENH-----------------------GHTDLVSAIQFAK-AIEEFNIFFYEEINTPLNPRLLKE 254 (403)
T ss_dssp HHHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHHH-HHGGGCEEEEECCSCTTSTHHHHH
T ss_pred HHHh---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHhhCCCEEeCCCChhhHHHHHH
Confidence 5555 654 456 8883 3578899998865 589999999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh-
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS- 426 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~- 426 (479)
|++++ +||++||+..+ +++++++++.+++|+| ++|++++||||++++++++|+++|+++++ |++. +..+
T Consensus 255 l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~v------~ik~~~~GGite~~~i~~~A~~~g~~~~~-h~~~-s~i~~ 325 (403)
T 2ox4_A 255 AKKKIDIPLASGERIYS-RWGFLPFLEDRSIDVI------QPDLGTCGGFTEFKKIADMAHIFEVTVQA-HVAG-TGVAE 325 (403)
T ss_dssp HHHTCCSCEEECTTCCH-HHHHHHHHHTTCCSEE------CCCHHHHTHHHHHHHHHHHHHHTTCEECC-CCCS-CHHHH
T ss_pred HHHhCCCCEEecCCcCC-HHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCEEee-cCCC-CHHHH
Confidence 99999 99999998765 9999999999999999 99999999999999999999999999876 6554 6544
Q ss_pred -HHHHhHhhcC
Q 011677 427 -FIADLSVGLA 436 (479)
Q Consensus 427 -~~~dlAv~~~ 436 (479)
+.+|||.++.
T Consensus 326 aa~~hlaaa~~ 336 (403)
T 2ox4_A 326 AASLHAEIAIP 336 (403)
T ss_dssp HHHHHHHHTCS
T ss_pred HHHHHHHHhCC
Confidence 4566666653
No 16
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=3e-45 Score=382.74 Aligned_cols=320 Identities=17% Similarity=0.234 Sum_probs=233.4
Q ss_pred HhhhcCCceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHH
Q 011677 38 HMRKAVPSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERI 117 (479)
Q Consensus 38 ~~~~~~~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l 117 (479)
||.+-.+++|++|+++.+...+ ...|+|+|+|++|+ +|+||+.. .+.+ ..+...|++.|
T Consensus 19 yfqsm~~~~It~v~~~~v~~~~-~~~vlV~v~Td~G~----------~G~GEa~~-------~~~~---~~~~~~i~~~l 77 (421)
T 4hnl_A 19 YFQSMTPTIITDVKSFAIKPDR-HNLVVVKVETNKGI----------SGLGCSTF-------QFRP---LAVKTVVDEYL 77 (421)
T ss_dssp --CCCCCCBEEEEEEEEECSSS-SCEEEEEEEETTSC----------CEEEECCC-------TTSH---HHHHHHHHHTH
T ss_pred eecccCCceEEEEEEEEECCCC-ceEEEEEEEECCCC----------EEEEeccC-------CCCH---HHHHHHHHHHH
Confidence 6665334589999999997654 45689999999999 59999753 2333 34455678889
Q ss_pred HHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecC
Q 011677 118 SEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISG 197 (479)
Q Consensus 118 ~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~G 197 (479)
+|.|+|+||.++++||+.|... ...+.+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++ |+|+...+
T Consensus 78 ap~LiG~dp~~ie~i~~~~~~~-~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLGG---~~r~~v--~~y~~~~~ 151 (421)
T 4hnl_A 78 RPLLMGRDANEIEDIWQVMNVN-SYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLGG---KARTAI--PAYTHAVA 151 (421)
T ss_dssp HHHHTTCBTTCHHHHHHHHHHT-TSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSSSCE--EEEEEEEE
T ss_pred HHHHCCCChhhHHHHHHHHHhh-ccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcCC---ccCccc--ceecccCC
Confidence 9999999999999999999653 33444567789999999999999999999999999998 444454 45665332
Q ss_pred CccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcc----cCCCCCCCC----CCCchHHHHHHH
Q 011677 198 GKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCN----VGEDGGLAP----NISSIREGLDLV 269 (479)
Q Consensus 198 G~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~----vg~~G~~~~----~~~~~~~~l~~v 269 (479)
+ +. +...+++.+...++|+++| .|.|..... ...+..+.. ..+..++.++.+
T Consensus 152 ~-------~~---------~~~~~~a~~~~~~G~~~~K----~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v 211 (421)
T 4hnl_A 152 D-------NL---------DDLYHEIDRFLAAGYRYIR----CQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMF 211 (421)
T ss_dssp S-------SH---------HHHHHHHHHHHHTTCSEEE----EEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHH
T ss_pred C-------CH---------HHHHHHHHHHHHhhHHHHh----hccccccCCchhccccccccccccccchhHHHHHHHHH
Confidence 1 11 1234556666666676665 455532110 111111111 111223444444
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
+.+.+.+|.+ ..+ +|+| +.||.++++++. +.+++|+|.|||||++++|+++|++
T Consensus 212 ~avR~a~G~~-~~l~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~ 266 (421)
T 4hnl_A 212 AAIKEKYGNQ-FQMLHDVH-----------------------ERLHPNQAIQFA-KAAEPYQLFFLEDILPPDQSHWLTQ 266 (421)
T ss_dssp HHHHHHHTTS-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSCGGGGGGHHH
T ss_pred HHHHHHhCCC-ceEecccc-----------------------ccCCHHHHHHHH-HHhhhhhhcccccCCcccchHHHHH
Confidence 4444444755 556 8984 367899999875 5689999999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCC-C--c
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGE-T--E 424 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ge-t--~ 424 (479)
|++++ +||++||.. .++++++++++.+++|++ |+|++++||||++++++++|+++|+++ +.|+.++ + .
T Consensus 267 l~~~~~ipIa~dE~~-~~~~~~~~~i~~~a~d~v------~~d~~~~GGite~~~ia~~A~~~gi~v-~~h~~~~~s~i~ 338 (421)
T 4hnl_A 267 LRSQSATPIATGELF-NNPMEWQELVKNRQIDFM------RAHVSQIGGITPALKLAHFCDAMGVRI-AWHTPSDISPVG 338 (421)
T ss_dssp HHTTCCCCEEECTTC-CSGGGTHHHHHTTCCSEE------CCCGGGGTSHHHHHHHHHHHHHTTCEE-CCCCCSSSCHHH
T ss_pred HHhcCCCCeecCcce-ehhHHHHHHHhcCCceEE------EeCCCCCCCHHHHHHHHHHHHHCCCeE-EEeCCcchhHHH
Confidence 99999 999999976 459999999999999999 999999999999999999999999997 5576665 3 2
Q ss_pred hhHHHHhHhhcCC
Q 011677 425 DSFIADLSVGLAS 437 (479)
Q Consensus 425 d~~~~dlAv~~~~ 437 (479)
.++.+||+.++..
T Consensus 339 ~aa~~hl~aa~~n 351 (421)
T 4hnl_A 339 LAVNTHLNIHLHN 351 (421)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 3456677777643
No 17
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=5e-44 Score=372.16 Aligned_cols=316 Identities=18% Similarity=0.207 Sum_probs=234.7
Q ss_pred CceeeEEEEEEEecCCCCc-----eEEEEEEeCCCceeeecCCCCCCCceee-eeeccCCCCccccccHHHHHHHHHHHH
Q 011677 44 PSVITKIKARQILDSRGIP-----TVEVDLFTHKGMFRASVPSGDPSGMYEA-LELRDGDKGTYLGNSVNRAVKNINERI 117 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~-----~v~V~v~t~~G~~~~~~ps~~~~G~~Ea-~~~~d~~~~~y~g~~~~~av~~i~~~l 117 (479)
+|+|++|+++.+..+...| +++|+|+|++|++ |+||+ ... +.+...+...+++ +
T Consensus 3 ~MkI~~i~~~~~~~p~~~p~~~~~~v~V~v~td~G~~----------G~Ge~a~~~---------g~~~~~~~~~i~~-l 62 (407)
T 2o56_A 3 LMKITSVDIIDVANDFASATSKWRPVVVKINTDEGIS----------GFGEVGLAY---------GVGASAGIGMAKD-L 62 (407)
T ss_dssp CCCEEEEEEEECCCCC-----CCCCEEEEEEETTSCE----------EEEEESCSS---------SSCHHHHHHHHHH-H
T ss_pred CCEEEEEEEEEeccccCCCcccceeEEEEEEeCCCCE----------EEEeeccCC---------CCchHHHHHHHHH-H
Confidence 3699999999998776666 6799999999984 99997 431 2234556666776 9
Q ss_pred HHhhcCCCCCCHHHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEe-e
Q 011677 118 SEALVGMDPILQSQIDQAMIDLD-KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTV-I 195 (479)
Q Consensus 118 ~p~LiG~d~~~~~~id~~l~~~~-~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~-i 195 (479)
+|.|+|+||.+++++|+.|.+.. .+.+++++..+|++|||+||||+.||..|+|||++||| .. +.++|+|++ +
T Consensus 63 ~p~liG~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~~--~~~vp~y~~~i 137 (407)
T 2o56_A 63 SAIIIGMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLGG---KS--REKIRTYASQL 137 (407)
T ss_dssp HHHHTTSCTTCHHHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CS--CSSEEEEEECG
T ss_pred HHHhCCCChHHHHHHHHHHHHhccccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCC---CC--CCeeeeeeeec
Confidence 99999999999999999998643 22244556789999999999999999999999999998 32 345677876 6
Q ss_pred c-C-CccC--CCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhh------CCCCcccCCCCCCCC--CCCchH
Q 011677 196 S-G-GKHA--GNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKY------GAHGCNVGEDGGLAP--NISSIR 263 (479)
Q Consensus 196 ~-G-G~~~--~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~------G~~~~~vg~~G~~~~--~~~~~~ 263 (479)
+ | +.|+ ++..+.++ ..+++.+...++|+.+| .|. |.. ..+.+|++.+ ..+.+.
T Consensus 138 ~~g~~~~~~~~~~~~~~~---------~~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~--~~s~~~~~~~~~~~~~~~ 202 (407)
T 2o56_A 138 QFGWGDGSDKDMLTEPEQ---------YAQAALTAVSEGYDAIK----VDTVAMDRHGNW--NQQNLNGPLTDKILRLGY 202 (407)
T ss_dssp GGCCSTTCTTCCCCSHHH---------HHHHHHHHHHTTCSEEE----ECCSSBCTTSCB--SCSCCCSSCCHHHHHHHH
T ss_pred cCCccccccccccCCHHH---------HHHHHHHHHHcCCCEEE----EcccccCCcCcc--ccCcccCCCchhHHHHHH
Confidence 5 4 3343 22233333 24555666666676666 332 211 1122333332 112234
Q ss_pred HHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccC
Q 011677 264 EGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKED 342 (479)
Q Consensus 264 ~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D 342 (479)
+.++.||+++ |.+ ..| +|++ +.||.++++++++ .+++|+|.|||||++++|
T Consensus 203 e~v~avR~a~---G~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~ 254 (407)
T 2o56_A 203 DRMAAIRDAV---GPD-VDIIAEMH-----------------------AFTDTTSAIQFGR-MIEELGIFYYEEPVMPLN 254 (407)
T ss_dssp HHHHHHHHHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHHH-HHGGGCCSCEECSSCSSS
T ss_pred HHHHHHHHhc---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCEEeCCCChhh
Confidence 5555555555 654 456 8883 3578899998865 589999999999999999
Q ss_pred HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCC
Q 011677 343 WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSG 421 (479)
Q Consensus 343 ~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~g 421 (479)
+++|++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|+++++ |++.
T Consensus 255 ~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGite~~~i~~~A~~~g~~~~~-h~~~ 326 (407)
T 2o56_A 255 PAQMKQVADKVNIPLAAGERIY-WRWGYRPFLENGSLSVI------QPDICTCGGITEVKKICDMAHVYDKTVQI-HVCG 326 (407)
T ss_dssp HHHHHHHHHHCCSCEEECTTCC-HHHHHHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCCS
T ss_pred HHHHHHHHHhCCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCeEee-cCCC
Confidence 99999999999 9999999865 59999999999999999 99999999999999999999999999876 6554
Q ss_pred CCch--hHHHHhHhhcC
Q 011677 422 ETED--SFIADLSVGLA 436 (479)
Q Consensus 422 et~d--~~~~dlAv~~~ 436 (479)
+.. ++.+|||.++.
T Consensus 327 -s~i~~aa~~hlaaa~~ 342 (407)
T 2o56_A 327 -GPISTAVALHMETAIP 342 (407)
T ss_dssp -CHHHHHHHHHHHHHCT
T ss_pred -CHHHHHHHHHHHHhCC
Confidence 554 45567776654
No 18
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=4.1e-44 Score=373.16 Aligned_cols=316 Identities=17% Similarity=0.163 Sum_probs=238.4
Q ss_pred ceeeEEEEEEEec--CCCCc----eEEEEEEeCCCceeeecCCCCCCCceee-eeeccCCCCccccccHHHHHHHHHHHH
Q 011677 45 SVITKIKARQILD--SRGIP----TVEVDLFTHKGMFRASVPSGDPSGMYEA-LELRDGDKGTYLGNSVNRAVKNINERI 117 (479)
Q Consensus 45 ~~I~~I~~~~i~d--s~g~~----~v~V~v~t~~G~~~~~~ps~~~~G~~Ea-~~~~d~~~~~y~g~~~~~av~~i~~~l 117 (479)
|+|++|+++.+.. +++.| +++|+|+|++|++ |+||+ ... +.+...+...+++ +
T Consensus 3 MkI~~i~~~~~~~pl~~~~~~~~~~v~V~v~td~G~~----------G~Ge~~~~~---------g~~~~~~~~~i~~-l 62 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSSYNPVLIRVNTDSGLS----------GIGEVGLAY---------GAGAKAGVGIIRD-L 62 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTCCCEEEEEEETTSCE----------EEEEESCSS---------STTHHHHHHHHHH-H
T ss_pred ceEEEEEEEEecccccccCcccccceEEEEEeCCCCE----------EEEeecCcC---------CCChHHHHHHHHH-H
Confidence 7999999999965 22223 6799999999984 99997 431 2234555666776 9
Q ss_pred HHhhcCCCCCCHHHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEe-e
Q 011677 118 SEALVGMDPILQSQIDQAMIDLD-KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTV-I 195 (479)
Q Consensus 118 ~p~LiG~d~~~~~~id~~l~~~~-~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~-i 195 (479)
+|.|+|+||.++++||+.|.+.. .+.++++++.+|++|||+||||+.||.+|+|||+|||| .. +-++|+|+. +
T Consensus 63 ~p~liG~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~~--~~~vp~y~~~i 137 (410)
T 2gl5_A 63 APLIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGG---KT--NEKLRTYASQL 137 (410)
T ss_dssp GGGTTTSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTS---CS--CSSEEEEEECG
T ss_pred HHHhCCCChHHHHHHHHHHHHhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCC---Cc--cCceeEeEecc
Confidence 99999999999999999998643 22245667789999999999999999999999999998 32 335777877 6
Q ss_pred c-C-CccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhh------CCCC----cccCCCCCCCC--CCCc
Q 011677 196 S-G-GKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKY------GAHG----CNVGEDGGLAP--NISS 261 (479)
Q Consensus 196 ~-G-G~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~------G~~~----~~vg~~G~~~~--~~~~ 261 (479)
+ | +.|+++.++++++ .+++.+...++|+.+| .|. |... ++. ..||+.+ .++.
T Consensus 138 ~~g~~~~~~~~~~~~~~---------~~~a~~~~~~Gf~~vK----ik~~~~~~~G~~~~~~~~~~-~~GG~~~~~~~~~ 203 (410)
T 2gl5_A 138 QFGWGDKNHILVTPEEY---------AEAARAALDDGYDAIK----VDPLEIDRNGDDCVFQNRNR-NYSGLLLADQLKM 203 (410)
T ss_dssp GGCCTTCCSCCCSHHHH---------HHHHHHHHHTTCSEEE----ECSSSBCTTSCBTTTSSCCG-GGGSCCCHHHHHH
T ss_pred cCCccccccccCCHHHH---------HHHHHHHHHcCCCEEE----EeccccCCcccccccccccc-cccCccchhHHHH
Confidence 6 5 6677665555542 4556666666777766 332 2100 000 1344432 2233
Q ss_pred hHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 262 IREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 262 ~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
+.+.++.||+++ |.+ ..| +|++ +.||.++++++++ .+++|+|.|||||+++
T Consensus 204 ~~e~v~avR~a~---G~d-~~l~vDan-----------------------~~~~~~~ai~~~~-~l~~~~i~~iE~P~~~ 255 (410)
T 2gl5_A 204 GEARIAAMREAM---GDD-ADIIVEIH-----------------------SLLGTNSAIQFAK-AIEKYRIFLYEEPIHP 255 (410)
T ss_dssp HHHHHHHHHHHH---CSS-SEEEEECT-----------------------TCSCHHHHHHHHH-HHGGGCEEEEECSSCS
T ss_pred HHHHHHHHHHhc---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCeEECCCCh
Confidence 455666666655 654 456 8883 3578899998865 4899999999999999
Q ss_pred cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC
Q 011677 341 EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 341 ~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~ 419 (479)
+|+++|++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|+++++ |+
T Consensus 256 ~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~ 327 (410)
T 2gl5_A 256 LNSDNMQKVSRSTTIPIATGERSY-TRWGYRELLEKQSIAVA------QPDLCLCGGITEGKKICDYANIYDTTVQV-HV 327 (410)
T ss_dssp SCHHHHHHHHHHCSSCEEECTTCC-TTHHHHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHTTTCEECC-CC
T ss_pred hhHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCeEee-cC
Confidence 9999999999999 9999999865 59999999999999999 99999999999999999999999999866 65
Q ss_pred CCCCchh--HHHHhHhhcC
Q 011677 420 SGETEDS--FIADLSVGLA 436 (479)
Q Consensus 420 ~get~d~--~~~dlAv~~~ 436 (479)
+ ++..+ +.+|||.++.
T Consensus 328 ~-~s~i~~aa~~hlaaa~~ 345 (410)
T 2gl5_A 328 C-GGPVSTVAALHMETAIP 345 (410)
T ss_dssp C-SSHHHHHHHHHHHHHCT
T ss_pred C-CCHHHHHHHHHHHHhCC
Confidence 5 36544 5567776654
No 19
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=2.6e-43 Score=365.02 Aligned_cols=311 Identities=19% Similarity=0.171 Sum_probs=234.8
Q ss_pred ceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHH-hhcC
Q 011677 45 SVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISE-ALVG 123 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p-~LiG 123 (479)
|+|++|+++.+. +.+.++++|+|+|++|+ +|+||+... | |++..+++..++ .++| .|+|
T Consensus 3 mkI~~i~~~~v~-~~~~~~v~V~v~td~G~----------~G~GE~~~~-------~-g~~~~~~~~~i~-~l~~~~l~G 62 (392)
T 2poz_A 3 LKITGVNIYLLK-SGRLHPVLVEISTDEGI----------TGAGEAGIA-------Y-GVGGTAAAGMIK-DLSERFLIG 62 (392)
T ss_dssp CCEEEEEEEECC-BTTBCCEEEEEEETTSC----------CEEEEESCS-------S-SSCHHHHHHHHH-HHHHHHTTT
T ss_pred CeEEEEEEEEEe-cCCccEEEEEEEECCCC----------EEEEeecCC-------c-CCchHHHHHHHH-HhhHhhhcC
Confidence 799999999998 66667899999999998 599998541 3 566777777786 4999 9999
Q ss_pred CCCCCHHHHHHHHHhh-hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCC
Q 011677 124 MDPILQSQIDQAMIDL-DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAG 202 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~-~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~ 202 (479)
+||.+++++|+.|.+. .++.++++++.+|++|||+||||+.||.+|+|||+|||| .. +-++|+|++ | |.+
T Consensus 63 ~d~~~~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg---~~--~~~v~~y~~---g-~~~ 133 (392)
T 2poz_A 63 KDPSRIEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFGG---KI--RDRVRAYAN---G-WYG 133 (392)
T ss_dssp CCTTCHHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CS--CSEEEEEEC---S-CCT
T ss_pred CChhHHHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcCC---Cc--cCceEEEEe---c-ccc
Confidence 9999999999999764 333345567789999999999999999999999999998 32 236777875 2 222
Q ss_pred CcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCC-CCCC------CCCCchHHHHHHHHHHHHh
Q 011677 203 NNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGED-GGLA------PNISSIREGLDLVKEAINR 275 (479)
Q Consensus 203 ~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~-G~~~------~~~~~~~~~l~~v~~ai~~ 275 (479)
+..+.++ ..+++.+...++|+.+| .|.|.... +.. +++. .+.+.+.+.++.||+++
T Consensus 134 ~~~~~~~---------~~~~a~~~~~~Gf~~vK----ik~g~~~~--g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~-- 196 (392)
T 2poz_A 134 AADTPDE---------FARAVERPLKEGYGALK----FYPLAQRV--GSALQHVTRRSMSAEAIELAYRRVKAVRDAA-- 196 (392)
T ss_dssp TCCSHHH---------HHHHTHHHHHTTCSEEE----ECCCCEEE--TTEEECCBTTBCCHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCHHH---------HHHHHHHHHHcCCCEEE----Eecccccc--cccccccccCCcchhhHHHHHHHHHHHHHhc--
Confidence 1122232 24455555556666665 34331100 000 0111 11233445566666555
Q ss_pred cCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-
Q 011677 276 TGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC- 353 (479)
Q Consensus 276 ~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~- 353 (479)
|.+ ..| +|++ +.||.+|++++++ .+++|++.|||||++++|+++|++|++++
T Consensus 197 -G~d-~~l~vD~n-----------------------~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ 250 (392)
T 2poz_A 197 -GPE-IELMVDLS-----------------------GGLTTDETIRFCR-KIGELDICFVEEPCDPFDNGALKVISEQIP 250 (392)
T ss_dssp -CTT-SEEEEECT-----------------------TCSCHHHHHHHHH-HHGGGCEEEEECCSCTTCHHHHHHHHHHCS
T ss_pred -CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCEEECCCCcccHHHHHHHHhhCC
Confidence 654 456 8883 3578899998865 48999999999999999999999999999
Q ss_pred hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHh
Q 011677 354 QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADL 431 (479)
Q Consensus 354 ~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dl 431 (479)
+||++||+..+ +++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+++ +.. ++.+||
T Consensus 251 ipIa~dE~~~~-~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~-h~~~-s~i~~aa~~hl 321 (392)
T 2poz_A 251 LPIAVGERVYT-RFGFRKIFELQACGII------QPDIGTAGGLMETKKICAMAEAYNMRVAP-HVCG-SSLIETATLQL 321 (392)
T ss_dssp SCEEECTTCCH-HHHHHHHHTTTCCSEE------CCCTTTSSCHHHHHHHHHHHHTTTCEECC-CCCS-SHHHHHHHHHH
T ss_pred CCEEecCCcCC-HHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCeEec-CCCC-CHHHHHHHHHH
Confidence 99999998765 9999999999999999 99999999999999999999999999866 6665 654 455677
Q ss_pred HhhcC
Q 011677 432 SVGLA 436 (479)
Q Consensus 432 Av~~~ 436 (479)
|.++.
T Consensus 322 aaa~~ 326 (392)
T 2poz_A 322 EANIT 326 (392)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 76654
No 20
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=5.2e-42 Score=353.60 Aligned_cols=304 Identities=16% Similarity=0.159 Sum_probs=222.6
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+++.+- .+.+ ++.++|+|+|++|++ |+||+... ......
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~----------G~GE~~~~-------------~~~~~~ 57 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTV----------GWGECLGP-------------ARPNAA 57 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEECSC-------------HHHHHH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCE----------EEEEecCC-------------cchHHH
Confidence 699999998772 3333 457999999999984 99997541 122234
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+.+.++|.|+|+||.+.+.+|+.|.+.....+..++..+|++|||+||||+.||.+|+|||++||| ..+.++| .|
T Consensus 58 ~~~~~~~~liG~d~~~~e~~~~~l~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGg---~~~~~~~--~y 132 (378)
T 4hpn_A 58 VVQAYSGWLIGQDPRQTEKIWAVLYNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLGG---RWRESVR--AY 132 (378)
T ss_dssp HHHHHHTTTTTSCTTCHHHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEE--EE
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccCC---ccccCcc--ee
Confidence 667899999999999999999999864332233345678999999999999999999999999998 3344544 45
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
++ ++...++ ..+ ..+..+++.+...++|+.+| .|.| .+.+++.+.++.||++
T Consensus 133 ~~--~~~~~~~---~~~------~~~~~~~~~~~~~~Gf~~~K----~k~g-------------~~~~~di~~v~avr~~ 184 (378)
T 4hpn_A 133 AT--GSFKRDN---VDR------VSDNASEMAERRAEGFHACK----IKIG-------------FGVEEDLRVIAAVREA 184 (378)
T ss_dssp EE--CCCBCTT---CCH------HHHHHHHHHHHHHTTCSEEE----EECC-------------SCHHHHHHHHHHHHHH
T ss_pred ee--ecccccc---chh------HHHHHHHHHHHHHhccceec----cccc-------------CChHHHHHHHHHHHHh
Confidence 54 2211110 000 01122333333334444433 3322 1223445566666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..+ +|+| +.||.++++++. +.+++|+|.|||||++++|++++++|++
T Consensus 185 ~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~ 236 (378)
T 4hpn_A 185 I---GPD-MRLMIDAN-----------------------HGYTVTEAITLG-DRAAGFGIDWFEEPVVPEQLDAYARVRA 236 (378)
T ss_dssp H---TTT-SEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSCEECCSCTTCHHHHHHHHH
T ss_pred c---CCc-EEEEEecC-----------------------cccCHHHHHHHH-hhhhhcccchhhcCCCccchhhhHHHHh
Confidence 5 655 456 9984 367899999875 4589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC-chhHHH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET-EDSFIA 429 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get-~d~~~~ 429 (479)
++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|+++ ++|+.+.. ..++.+
T Consensus 237 ~~~ipIa~dE~~~-~~~~~~~~i~~~a~d~i------~~d~~~~GGit~~~~ia~~A~~~gi~v-~~h~~~~~i~~aa~~ 308 (378)
T 4hpn_A 237 GQPIPVAGGETWH-GRYGMWQALSAGAVDIL------QPDLCGCGGFSEIQKIATLATLHGVRI-VPHVWGTGVQIAAAL 308 (378)
T ss_dssp HSSSCEEECTTCC-HHHHHHHHHHTTCCSEE------CCBTTTTTHHHHHHHHHHHHHHHTCEE-CCBCCSSHHHHHHHH
T ss_pred hCCceeeCCcCcc-chHhHHHHHHcCCCCEE------eeCCeeCCChhHHHHHHHHHHHcCCeE-EeCCCCcHHHHHHHH
Confidence 99 9999999865 49999999999999999 999999999999999999999999995 78976432 335667
Q ss_pred HhHhhcCCCCc
Q 011677 430 DLSVGLASGQI 440 (479)
Q Consensus 430 dlAv~~~~~~i 440 (479)
|++.++.....
T Consensus 309 h~~aa~~~~~~ 319 (378)
T 4hpn_A 309 QFMAAMTPDPV 319 (378)
T ss_dssp HHHHHCCCSSC
T ss_pred HHHHHcCcccc
Confidence 77777655443
No 21
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=1.8e-42 Score=361.05 Aligned_cols=316 Identities=19% Similarity=0.210 Sum_probs=225.9
Q ss_pred HhhhcC-CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHH
Q 011677 38 HMRKAV-PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINER 116 (479)
Q Consensus 38 ~~~~~~-~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~ 116 (479)
||...+ +|+|++|++..+- ..+...+.|+|+|++|+ +|+||+.. .+.. .++...|++.
T Consensus 19 ~~~~~~~~mkIt~v~~~~~~-~~~~~~v~V~v~td~Gi----------~G~GE~~~-------~~~~---~~~~~~i~~~ 77 (422)
T 3tji_A 19 YFQSMMTPVIIKNIECFITR-PDRHNLVTVRVTTEQGI----------TGHGCATF-------QQRP---LAVKTLVDEY 77 (422)
T ss_dssp -----CCCCBEEEEEEEEEC-SSSSCEEEEEEEETTSC----------CEEEECCC-------TTSH---HHHHHHHHHT
T ss_pred eccccCCCcEEEEEEEEEEc-CCCccEEEEEEEECCCC----------EEEEeccC-------CCCH---HHHHHHHHHH
Confidence 566654 6899999998773 22336899999999999 59999753 1222 3445567777
Q ss_pred HHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeec
Q 011677 117 ISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVIS 196 (479)
Q Consensus 117 l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~ 196 (479)
++|.|+|+||.+++++|+.|.+.. .+..+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++| +|+.++
T Consensus 78 l~p~LiG~dp~~ie~~~~~l~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~--~y~~~~ 151 (422)
T 3tji_A 78 LQPLMIGRDANNIEDLWQMMNVNA-YWRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFGG---KSRDAIP--AYSHAS 151 (422)
T ss_dssp HHHHHTTSBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSSSCEE--EEEEEE
T ss_pred HHHHhCCCCcccHHHHHHHHHHhh-hccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCC---CCCCeEE--EEEEeC
Confidence 999999999999999999998642 1222345578999999999999999999999999998 3344555 465443
Q ss_pred CCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCccc----C----CCCC-CCCC--CCchHHH
Q 011677 197 GGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNV----G----EDGG-LAPN--ISSIREG 265 (479)
Q Consensus 197 GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~v----g----~~G~-~~~~--~~~~~~~ 265 (479)
+. +. +...+++.+...++|+++| .|.|.....- . ..|. |... ++.+.+.
T Consensus 152 ~~-------~~---------e~~~~~a~~~~~~G~~~iK----lKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~ 211 (422)
T 3tji_A 152 GE-------TL---------EALFASVDALIAQGYRHIR----CQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEM 211 (422)
T ss_dssp ES-------SH---------HHHHHHHHHHHHTTCSEEE----EEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHH
T ss_pred CC-------CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchhHHHHHHHH
Confidence 21 11 1234445555556676665 5655321000 0 0000 0000 1223455
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+++ |.+ ..| +|+| +.||.++++++. +.++++++.|||||++++|++
T Consensus 212 v~avR~av---G~d-~~L~vDaN-----------------------~~~~~~~A~~~~-~~Le~~~i~~iEqP~~~~d~~ 263 (422)
T 3tji_A 212 FHALREKY---GWK-LHILHDVH-----------------------ERLFPQQAVQLA-KQLEPFQPYFIEDILPPQQSA 263 (422)
T ss_dssp HHHHHHHH---CSS-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSCGGGGG
T ss_pred HHHHHHHc---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCeEECCCChhhHH
Confidence 55555555 644 456 8883 367889999875 558999999999999999999
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCC-C
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSG-E 422 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~g-e 422 (479)
++++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|++++ .|+.. +
T Consensus 264 ~~~~l~~~~~iPIa~dE~~~-~~~~~~~ll~~ga~d~v------~~k~~~~GGit~~~kia~lA~a~gv~v~-~h~~~~~ 335 (422)
T 3tji_A 264 WLEQVRQQSCVPLALGELFN-NPAEWHDLIVNRRIDFI------RCHVSQIGGITPALKLAHLCQAFGVRLA-WHGPGDM 335 (422)
T ss_dssp GHHHHHHHCCCCEEECTTCC-SGGGTHHHHHTTCCSEE------CCCGGGGTSHHHHHHHHHHHHHTTCEEC-CCCCSSS
T ss_pred HHHHHHhhCCCCEEEeCCcC-CHHHHHHHHhcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCEEE-ecCCCCc
Confidence 999999999 9999999865 59999999999999999 9999999999999999999999999975 46553 5
Q ss_pred Cch--hHHHHhHhhcC
Q 011677 423 TED--SFIADLSVGLA 436 (479)
Q Consensus 423 t~d--~~~~dlAv~~~ 436 (479)
+.. ++.+|||.++.
T Consensus 336 s~Ig~aA~~hlaaa~p 351 (422)
T 3tji_A 336 TPIGVAVNTHLNIHLH 351 (422)
T ss_dssp CHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHhCC
Confidence 544 45667776653
No 22
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=3.6e-42 Score=355.02 Aligned_cols=301 Identities=17% Similarity=0.118 Sum_probs=226.8
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+|++|+++.+. .+.+ +..+.|+|+|++|++ |+||+.++.. +.|++++...+..
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~----------G~GE~~~~~~---~~y~~e~~~~~~~ 70 (381)
T 3fcp_A 4 TATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGIC----------GIGEATTIGG---LSYGVESPEAISS 70 (381)
T ss_dssp CCBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCE----------EEEEEECSTT---TTSSSCCHHHHHH
T ss_pred CcEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCE----------EEeccccCCC---CccCCCCHHHHHH
Confidence 6899999999883 2222 357899999999994 9999987532 4578888888888
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+||.+.+++|+.|.+... +. .+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 71 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----g~--~~A~said~ALwDl~gk~~g~Pv~~LLGg---~~r~~v~~-- 139 (381)
T 3fcp_A 71 AITHYLTPLLKGQPADNLNALTARMNGAIK----GN--TFAKSAIETALLDAQGKALGLPVSALLGG---ALQTALPV-- 139 (381)
T ss_dssp HHHHTHHHHHTTSBSSCHHHHHHHHHHHCC----SC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEEB--
T ss_pred HHHHHHHHHhcCCCcCCHHHHHHHHHHHhc----Cc--HHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCCCceee--
Confidence 888889999999999999999999976321 11 57999999999999999999999999998 33455555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHH-HHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGS-ETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~-e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
|..++.| +. ...++++.+... .+|+.+| .|.|. .+.+.+.+.++.||
T Consensus 140 ~~t~~~~-------~~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avR 187 (381)
T 3fcp_A 140 LWTLASG-------DT---------AKDIAEGEKLLAEGRHRAFK----LKIGA------------RELATDLRHTRAIV 187 (381)
T ss_dssp CEEECSS-------CH---------HHHHHHHHHHTC----CEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred EEEecCC-------Ch---------HHHHHHHHHHHHhCCCCEEE----EecCC------------CChHHHHHHHHHHH
Confidence 4333222 11 112334444333 3565555 45431 11233455555555
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||++++|++++++|
T Consensus 188 ~a~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l 239 (381)
T 3fcp_A 188 EAL---GDR-ASIRVDVN-----------------------QAWDAATGAKGC-RELAAMGVDLIEQPVSAHDNAALVRL 239 (381)
T ss_dssp HHT---CTT-CEEEEECT-----------------------TCBCHHHHHHHH-HHHHHTTCSEEECCBCTTCHHHHHHH
T ss_pred HHc---CCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCccceeCCCCcccHHHHHHH
Confidence 544 644 456 9983 367889999875 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS-- 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~-- 426 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+..+
T Consensus 240 ~~~~~ipIa~dE~~~-~~~~~~~~~~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~i~~a 311 (381)
T 3fcp_A 240 SQQIETAILADEAVA-TAYDGYQLAQQGFTGAY------ALKIAKAGGPNSVLALARVAQAAGIGLYGGTM-LEGTVGTV 311 (381)
T ss_dssp HHHSSSEEEESTTCC-SHHHHHHHHHTTCCSEE------EECHHHHTSTTHHHHHHHHHHHHTCEEEECCS-CCCHHHHH
T ss_pred HHhCCCCEEECCCcC-CHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCceecCCC-CccHHHHH
Confidence 9999 9999999865 59999999999999999 99999999999999999999999999977665 466554
Q ss_pred HHHHhHhhcC
Q 011677 427 FIADLSVGLA 436 (479)
Q Consensus 427 ~~~dlAv~~~ 436 (479)
+.+||+.++.
T Consensus 312 a~~hlaaa~~ 321 (381)
T 3fcp_A 312 ASLHAWSTLP 321 (381)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHhCC
Confidence 5556655544
No 23
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=5.2e-42 Score=355.79 Aligned_cols=299 Identities=18% Similarity=0.217 Sum_probs=228.3
Q ss_pred CceeeEEEEEEEe--------cCC----------CCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCcccccc
Q 011677 44 PSVITKIKARQIL--------DSR----------GIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNS 105 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~----------g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~ 105 (479)
+|+|++|+.+.+. .+. ..++++|+|+|++|++ |+||+.. +.+.++
T Consensus 25 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~----------G~GE~~~------~~~~~~- 87 (398)
T 2pp0_A 25 GDRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFE----------GVGFSYS------KRAGGQ- 87 (398)
T ss_dssp SCCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCE----------EEEEEEE------SSTTHH-
T ss_pred CCeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCE----------EEEEecC------ccchHH-
Confidence 5899999998883 111 2467999999999984 9999832 112222
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCc
Q 011677 106 VNRAVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNL 185 (479)
Q Consensus 106 ~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~ 185 (479)
++..+.+.++|.|+|+||.+++++|+.|.+.+...+.++++.+|++|||+||||+.||.+|+|||+|||| .
T Consensus 88 ---~~~~~~~~l~p~l~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg---~--- 158 (398)
T 2pp0_A 88 ---GIYAHAKEIADNLLGEDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGA---H--- 158 (398)
T ss_dssp ---HHHHHHHHHGGGGTTSCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHCC---S---
T ss_pred ---HHHHHHHHHHHHHcCCCchhHHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C---
Confidence 3333344699999999999999999999876532233557789999999999999999999999999998 2
Q ss_pred ccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHH
Q 011677 186 TLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREG 265 (479)
Q Consensus 186 ~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~ 265 (479)
+.++|+|+++ ||.+. .+.++ ..+++.+...++|+.+| .|.| . ++.+.+.+.
T Consensus 159 ~~~vp~y~~~-g~~~~---~~~e~---------~~~~a~~~~~~Gf~~vK----ik~g-------~-----~~~~~d~e~ 209 (398)
T 2pp0_A 159 RDSVQCYNTS-GGFLH---TPLDQ---------VLKNVVISRENGIGGIK----LKVG-------Q-----PNCAEDIRR 209 (398)
T ss_dssp CSEEEEEECT-TSCTT---SCHHH---------HHHHHHHHHHTTCSCEE----EECC-------C-----SCHHHHHHH
T ss_pred CCCeeEEEec-CCcCC---CCHHH---------HHHHHHHHHHhCCCeEE----EecC-------C-----CCHHHHHHH
Confidence 3456778764 33221 12222 24455555555665555 3422 1 223345667
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+++ |.+ ..| +|+| +.||.+++++++. .+++|+|.|||||++++|++
T Consensus 210 v~avR~av---G~d-~~l~vDan-----------------------~~~~~~~ai~~~~-~l~~~~i~~iEqP~~~~d~~ 261 (398)
T 2pp0_A 210 LTAVREAL---GDE-FPLMVDAN-----------------------QQWDRETAIRMGR-KMEQFNLIWIEEPLDAYDIE 261 (398)
T ss_dssp HHHHHHHH---CSS-SCEEEECT-----------------------TCSCHHHHHHHHH-HHGGGTCSCEECCSCTTCHH
T ss_pred HHHHHHHc---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHHcCCceeeCCCChhhHH
Confidence 77777766 644 456 8883 3578899998865 58999999999999999999
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET 423 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get 423 (479)
+|++|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++ +|+++++
T Consensus 262 ~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGite~~~i~~~A~~~gi~~~-~h~~~~~ 333 (398)
T 2pp0_A 262 GHAQLAAALDTPIATGEMLT-SFREHEQLILGNASDFV------QPDAPRVGGISPFLKIMDLAAKHGRKLA-PHFAMEV 333 (398)
T ss_dssp HHHHHHHHCSSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSCHHH
T ss_pred HHHHHHhhCCCCEEecCCcC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCeEe-ecCccHH
Confidence 999999999 9999999865 69999999999999999 9999999999999999999999999975 6876654
Q ss_pred chhHHHHhHhhcCC
Q 011677 424 EDSFIADLSVGLAS 437 (479)
Q Consensus 424 ~d~~~~dlAv~~~~ 437 (479)
++|||+++..
T Consensus 334 ----~~~laaa~~~ 343 (398)
T 2pp0_A 334 ----HLHLSAAYPL 343 (398)
T ss_dssp ----HHHHHHTCSS
T ss_pred ----HHHHHhcCCC
Confidence 6899988754
No 24
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=6.4e-42 Score=357.91 Aligned_cols=314 Identities=13% Similarity=0.090 Sum_probs=225.1
Q ss_pred CceeeEEEEEEEecC----CCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHH
Q 011677 44 PSVITKIKARQILDS----RGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISE 119 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds----~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p 119 (479)
||+|++|+++.+--. .++..+.|+|+|++|++ |+||+..+. +. ..++...|++.++|
T Consensus 1 mMkIt~i~~~~~~~p~~~~~~~~~v~V~v~Td~G~~----------G~GE~~~~~------~~---~~~v~~~i~~~l~p 61 (433)
T 3rcy_A 1 MVKLRDLDIIVTAPPAPGWGGRYWILVKLTTDDGIT----------GWGECYAAS------VG---PEAMRAVIEDVFAR 61 (433)
T ss_dssp -CCEEEEEEEEECCCTTCTTCSCEEEEEEEETTSCE----------EEEEECCCS------SC---HHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEEcCCCCccCCceEEEEEEEECCCCE----------EEEeccCCC------CC---HHHHHHHHHHHHHH
Confidence 789999999988431 14578999999999994 999975431 22 23445567788999
Q ss_pred hhcCCCCCCHHHHHHHHHhhhccCCCCc-hhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEee---
Q 011677 120 ALVGMDPILQSQIDQAMIDLDKTEKKGE-LGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVI--- 195 (479)
Q Consensus 120 ~LiG~d~~~~~~id~~l~~~~~~~~~~~-~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i--- 195 (479)
.|+|+||.+++++|+.|.+.. ...++. +..+|++|||+||||+.||.+|+|||+|||| ..+.++| +|+.+
T Consensus 62 ~LiG~dp~~ie~~~~~l~~~~-~~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLGG---~~r~~v~--~y~~~~~~ 135 (433)
T 3rcy_A 62 HMEGENPENIELMFRRVYSSG-FTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGG---KMNPRIR--AYTYLYPL 135 (433)
T ss_dssp HTTTSCTTCHHHHHHHHHHTT-TCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTC---CSCSSEE--EEEECCCC
T ss_pred HhCCCCcccHHHHHHHHHhcc-cccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCC---CCCCeEE--EEEEEccc
Confidence 999999999999999998632 112222 5578999999999999999999999999998 3345554 46654
Q ss_pred cCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCC---CCchHHHHHHHHHH
Q 011677 196 SGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPN---ISSIREGLDLVKEA 272 (479)
Q Consensus 196 ~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~---~~~~~~~l~~v~~a 272 (479)
+|.-.. ..+. ..+...+++.+...++|+++| .|.|..... ..|..+. ++.+.+.++.||++
T Consensus 136 ~g~~~~-~~~~--------~~e~~~~~a~~~~~~Gf~~iK----lk~g~~~~~---~~G~~~~~~~~~~d~e~v~avR~a 199 (433)
T 3rcy_A 136 PHHPIT-PFWT--------SADMAAESAADCVARGYTAVK----FDPAGPYTL---RGGHMPAMTDISLSVEFCRKIRAA 199 (433)
T ss_dssp TTSCHH-HHTT--------CHHHHHHHHHHHHHTTCSEEE----ECCSCCCBT---TCCBCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcccc-cCCC--------CHHHHHHHHHHHHHcCCCEEE----EcCCCCccc---ccCCCcchhhHHHHHHHHHHHHHH
Confidence 221000 0000 111233444444455666555 454421110 0122221 22334555555555
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..| +|+| +.||.++++++. +.+++|++.|||||++++|++++++|++
T Consensus 200 v---G~d-~~L~vDan-----------------------~~~t~~~A~~~~-~~Le~~~i~~iEeP~~~~~~~~~~~l~~ 251 (433)
T 3rcy_A 200 V---GDK-ADLLFGTH-----------------------GQFTTAGAIRLG-QAIEPYSPLWYEEPVPPDNVGAMAQVAR 251 (433)
T ss_dssp H---TTS-SEEEECCC-----------------------SCBCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHH
T ss_pred h---CCC-CeEEEeCC-----------------------CCCCHHHHHHHH-HHhhhcCCCEEECCCChhhHHHHHHHHh
Confidence 5 644 455 8873 367889999875 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FI 428 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~ 428 (479)
++ +||++||+. +++++++++++.+++|+| ++|++++||||++++++++|+++|++++ .|+. ++..+ +.
T Consensus 252 ~~~iPIa~dE~~-~~~~~~~~~l~~g~~D~v------~~d~~~~GGit~~~kia~lA~~~gv~~~-~h~~-~s~i~~aa~ 322 (433)
T 3rcy_A 252 AVRIPVATGERL-TTKAEFAPVLREGAAAIL------QPALGRAGGIWEMKKVAAMAEVYNAQMA-PHLY-AGPVEWAAN 322 (433)
T ss_dssp HSSSCEEECTTC-CSHHHHHHHHHTTCCSEE------CCCHHHHTHHHHHHHHHHHHHTTTCEEC-CCCS-SCHHHHHHH
T ss_pred ccCCCEEecCCC-CCHHHHHHHHHcCCCCEE------EeCchhcCCHHHHHHHHHHHHHcCCEEE-ecCC-CCHHHHHHH
Confidence 99 999999986 569999999999999999 9999999999999999999999999975 5653 66554 55
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
+|||.++
T Consensus 323 lhlaaa~ 329 (433)
T 3rcy_A 323 VHFAASI 329 (433)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 5666554
No 25
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=9.6e-42 Score=357.26 Aligned_cols=321 Identities=18% Similarity=0.202 Sum_probs=225.3
Q ss_pred HHHHHHhhhcC-CceeeEEEEEEEecCCCCceEEEEEEeCC-CceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 33 LFISNHMRKAV-PSVITKIKARQILDSRGIPTVEVDLFTHK-GMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 33 ~~l~~~~~~~~-~~~I~~I~~~~i~ds~g~~~v~V~v~t~~-G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
|+=--||.... +|+|++|++..+ ...+...+.|+|+|++ |++ |+||+... +. ...+.
T Consensus 14 ~~~~~~~~~~~~~mkIt~v~~~~~-~~~~~~~v~V~v~Td~~Gi~----------G~GE~~~~-------~~---~~~~~ 72 (440)
T 3t6c_A 14 GTENLYFQSMMSNLFITNVKTILT-APGGIDLVVVKIETNEPGLY----------GLGCATFT-------QR---IYAVQ 72 (440)
T ss_dssp ------------CCCEEEEEEEEE-CTTSSCEEEEEEEESSTTCE----------EEEECCCG-------GG---HHHHH
T ss_pred CccchhhhhcCCCCEEEEEEEEEE-CCCCceEEEEEEEEcCCCCE----------EEEeeccC-------CC---HHHHH
Confidence 33344676643 689999999876 3323368999999999 994 99997531 22 23445
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..|++.|+|.|+|+||.+.+++|+.|.+.. .+..+.+..+|++|||+||||++||.+|+|||+|||| ..+.++|+
T Consensus 73 ~~i~~~l~p~LiG~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~- 147 (440)
T 3t6c_A 73 SAIDEYLAPFLIGKDPARIEDIWQSAAVSG-YWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLGG---KCRDGIAL- 147 (440)
T ss_dssp HHHHTTHHHHHTTCCTTCHHHHHHHHHHTT-SCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSSEEE-
T ss_pred HHHHHHHHHHHcCCChhhHHHHHHHHHHhc-ccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcCC---CCCCeeEE-
Confidence 567777999999999999999999998632 1222335568999999999999999999999999998 33455554
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCc-----------ccCCCCCCC---
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGC-----------NVGEDGGLA--- 256 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~-----------~vg~~G~~~--- 256 (479)
|+.+++. +. +...+++.+...++|+++| .|.|.... .+..+.++.
T Consensus 148 -y~~~~~~-------~~---------e~~~~~a~~~~~~Gf~~~K----~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~ 206 (440)
T 3t6c_A 148 -YVHTDGA-------DE---------VEVEDSARAKMEEGYQYIR----CQMGMYGGAGTDDLRLIANRMVKAKNIQPKR 206 (440)
T ss_dssp -EEEECCS-------SH---------HHHHHHHHHHHHTTCSEEE----ECSSSSTTCCBCCHHHHSSCBCCCSSCCCCC
T ss_pred -EEECCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccccccc
Confidence 6543321 11 1234445555556676665 45542210 000000010
Q ss_pred ------CC--------CCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHH
Q 011677 257 ------PN--------ISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEM 321 (479)
Q Consensus 257 ------~~--------~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~ 321 (479)
|. ++.+.+.++.||+++ |.+ ..| +|+| +.||.++++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~---G~d-~~L~vDaN-----------------------~~~~~~~A~~~ 259 (440)
T 3t6c_A 207 SPRTKAPGIYFDPEAYAKSIPRLFDHLRNKL---GFS-VELLHDAH-----------------------ERITPINAIHM 259 (440)
T ss_dssp CCSSCCSSEECCHHHHHHHHHHHHHHHHHHH---CSS-SEEEEECT-----------------------TCSCHHHHHHH
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHhc---CCC-CeEEEECC-----------------------CCCCHHHHHHH
Confidence 00 122345555565555 644 456 8883 36788999987
Q ss_pred HHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHH
Q 011677 322 YKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEA 400 (479)
Q Consensus 322 ~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea 400 (479)
. +.++++++.|||||++++|++++++|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++
T Consensus 260 ~-~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~d~v------~~k~~~~GGit~~ 331 (440)
T 3t6c_A 260 A-KALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAMGELFV-NVNEWKPLIDNKLIDYI------RCHISSIGGITPA 331 (440)
T ss_dssp H-HHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCCGGGGTSHHHH
T ss_pred H-HHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEeCcccC-CHHHHHHHHHcCCccce------eechhhhCCHHHH
Confidence 5 457999999999999999999999999999 9999999865 59999999999999999 9999999999999
Q ss_pred HHHHHHHhhCCCeEEEecCCC-CCch--hHHHHhHhhcC
Q 011677 401 IEVVKLANDVPWGVVISHRSG-ETED--SFIADLSVGLA 436 (479)
Q Consensus 401 ~~i~~~A~~~g~~~~v~h~~g-et~d--~~~~dlAv~~~ 436 (479)
++++++|+++|+++++ |++. ++.. ++.+||+.++.
T Consensus 332 ~~ia~~A~~~gi~~~~-h~~~~~s~Ig~aa~~hlaaa~p 369 (440)
T 3t6c_A 332 KKIAIYSELNGVRTAW-HSPGDISPIGVCANMHLDLSSP 369 (440)
T ss_dssp HHHHHHHHHTTCEECC-CCSSSSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCEEEe-ccCCCccHHHHHHHHHHHHhCC
Confidence 9999999999999755 5443 5544 45677777664
No 26
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=3.9e-42 Score=359.06 Aligned_cols=312 Identities=15% Similarity=0.159 Sum_probs=228.8
Q ss_pred cCCceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhh
Q 011677 42 AVPSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEAL 121 (479)
Q Consensus 42 ~~~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~L 121 (479)
.+||+|++|+...+- .++..+.|+|+|++|++ |+||+... +. ...+...|++.++|.|
T Consensus 21 ~~~mkIt~v~~~~~~--~~~~~v~V~v~td~G~~----------G~GE~~~~-------~~---~~~~~~~i~~~l~p~L 78 (425)
T 3vcn_A 21 QSMLKIIDAKVIVTC--PGRNFVTLKITTEDGIT----------GVGDATLN-------GR---ELSVVSFLQDHMVPSL 78 (425)
T ss_dssp --CCBEEEEEEEEEC--SSSCEEEEEEEETTSCE----------EEEECCCT-------TC---HHHHHHHHHHTTHHHH
T ss_pred CCCCEEEEEEEEEEc--CCCcEEEEEEEECCCCE----------EEEeccCC-------CC---hHHHHHHHHHHHHHHh
Confidence 348899999998773 34578999999999994 99997431 11 2344556777799999
Q ss_pred cCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccC
Q 011677 122 VGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHA 201 (479)
Q Consensus 122 iG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~ 201 (479)
+|+||.+.+++|+.|.+... +..+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+.+++.
T Consensus 79 iG~dp~~ie~i~~~~~~~~~-~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~--- 149 (425)
T 3vcn_A 79 IGRDAHQIEDIWQFFYRGSY-WRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLGG---ACRTGVTV--YGHANGE--- 149 (425)
T ss_dssp TTCBTTCHHHHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTC---CSSSSEEE--EEEEEES---
T ss_pred CCCChhhHHHHHHHHHhhcc-cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCC---CCCCeeeE--EEeCCCC---
Confidence 99999999999999986321 222345568999999999999999999999999998 33455555 5543321
Q ss_pred CCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCC----cccCCCCC-CCC------C---------CCc
Q 011677 202 GNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHG----CNVGEDGG-LAP------N---------ISS 261 (479)
Q Consensus 202 ~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~----~~vg~~G~-~~~------~---------~~~ 261 (479)
+. +...+++.+...++|+++| .|.|... .+++..+. +.+ . ++.
T Consensus 150 ----~~---------e~~~~~a~~~~~~Gf~~iK----lKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~ 212 (425)
T 3vcn_A 150 ----TI---------EDTIAEAVKYKAMGYKAIR----LQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNS 212 (425)
T ss_dssp ----SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTT
T ss_pred ----CH---------HHHHHHHHHHHHcCCCEEE----EeecCccccccccccccccccCcccccccccccccchhHHHH
Confidence 11 1234455555556676665 5655310 00000000 111 1 234
Q ss_pred hHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 262 IREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 262 ~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
+.+.++.||+++ |.+ ..| +|+| +.||.++++++. +.++++++.|||||+++
T Consensus 213 d~e~v~avR~a~---G~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~ 264 (425)
T 3vcn_A 213 VPKLFERAREVL---GWD-VHLLHDVH-----------------------HRLTPIEAARLG-KDLEPYRLFWLEDSVPA 264 (425)
T ss_dssp THHHHHHHHHHH---CSS-SEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCC
T ss_pred HHHHHHHHHHHc---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCh
Confidence 566777777766 644 355 8883 367889999875 55899999999999999
Q ss_pred cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC
Q 011677 341 EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 341 ~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~ 419 (479)
+|++++++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|+++++ |+
T Consensus 265 ~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~ 336 (425)
T 3vcn_A 265 ENQAGFRLIRQHTTTPLAVGEIFA-HVWDAKQLIEEQLIDYL------RATVLHAGGITNLKKIAAFADLHHVKTGC-HG 336 (425)
T ss_dssp SSTTHHHHHHHHCCSCEEECTTCC-SGGGTHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHGGGTCEECC-CC
T ss_pred hhHHHHHHHHhcCCCCEEeCCCcC-CHHHHHHHHHcCCCCeE------ecChhhcCCHHHHHHHHHHHHHcCCEEee-cc
Confidence 9999999999999 9999999864 59999999999999999 99999999999999999999999999755 54
Q ss_pred CC-CCch--hHHHHhHhhcCC
Q 011677 420 SG-ETED--SFIADLSVGLAS 437 (479)
Q Consensus 420 ~g-et~d--~~~~dlAv~~~~ 437 (479)
.. ++.. ++.+|||.++..
T Consensus 337 ~~~~s~ig~aA~~hlaaa~pn 357 (425)
T 3vcn_A 337 ATDLSPVTMAAALHFDMSITN 357 (425)
T ss_dssp CTTSCHHHHHHHHHHHHTCSC
T ss_pred CCcccHHHHHHHHHHHHhCCC
Confidence 43 4544 456677666543
No 27
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=9.9e-42 Score=354.94 Aligned_cols=305 Identities=14% Similarity=0.153 Sum_probs=220.1
Q ss_pred HhhhcCCceeeEEEEEEEecCCCC-------------------------------ceEEEEEEeCCCceeeecCCCCCCC
Q 011677 38 HMRKAVPSVITKIKARQILDSRGI-------------------------------PTVEVDLFTHKGMFRASVPSGDPSG 86 (479)
Q Consensus 38 ~~~~~~~~~I~~I~~~~i~ds~g~-------------------------------~~v~V~v~t~~G~~~~~~ps~~~~G 86 (479)
||.+-++++|++|+++.+.-+... .+|+|+|+|++|++ |
T Consensus 19 yFqsm~~~~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~----------G 88 (412)
T 4h1z_A 19 YFQSMMSDRVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAV----------G 88 (412)
T ss_dssp ------CCCEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCE----------E
T ss_pred HHHhhccceeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCE----------E
Confidence 555421238999999988543221 24899999999994 9
Q ss_pred ceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhc-cCCCCchhhhHHHHHHHHHHHHHH
Q 011677 87 MYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDK-TEKKGELGANAILAVSIAACKAGA 165 (479)
Q Consensus 87 ~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~-~~~~~~~g~~A~~AvsiAl~da~a 165 (479)
|||+... .+...+.+.|++.|+|.|+|+||.+++.||+.|.+... ....+++..+|++|||+||||+.|
T Consensus 89 ~GE~~~~----------~~~~~~~~~i~~~lap~liG~dp~~~~~i~~~l~~~~~~~~~~~g~~~~A~saiD~ALwDl~g 158 (412)
T 4h1z_A 89 WGETYGL----------VAPRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRVRGYTGGFYVDALAAIDIALWDLAG 158 (412)
T ss_dssp EEEEECS----------SCHHHHHHHHHHTHHHHHTTSCGGGHHHHHHHHHTTTGGGTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC----------CCHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 9998542 12345566788889999999999999999999986432 222344567899999999999999
Q ss_pred HhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 011677 166 AEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAH 245 (479)
Q Consensus 166 k~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~ 245 (479)
|.+|+|||++||| ..+.++|+ |+. |. .. +.. ....+.+.+...++|+.+| .|.|
T Consensus 159 K~~g~Pl~~LLGG---~~~~~v~~--y~s--~~-~~----~~~--------~~~~~~a~~~~~~G~~~~K----~k~g-- 212 (412)
T 4h1z_A 159 KLAGLPVCKLLGG---QRRDRIAA--YIS--GL-PE----DTR--------AKRAELAAAWQAKGFSSFK----FASP-- 212 (412)
T ss_dssp HHHTCBGGGGTTC---CCCSEEEE--EEC--CC-CC----SSH--------HHHHHHHHHHHHTTCCEEE----EEGG--
T ss_pred HHcCCCHHHhcCC---CCCceEEE--Eec--cC-CC----CcH--------HHHHHHHHHHHhcCcceec----cccc--
Confidence 9999999999998 43445544 542 11 00 000 1112233333334444443 2321
Q ss_pred CcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHH
Q 011677 246 GCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKE 324 (479)
Q Consensus 246 ~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ 324 (479)
...+.+.+.++.+|+++ |.+ .++ +|+| +.||.++++++. +
T Consensus 213 -----------~~~~~~~~~v~~vR~~~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~ 253 (412)
T 4h1z_A 213 -----------VADDGVAKEMEILRERL---GPA-VRIACDMH-----------------------WAHTASEAVALI-K 253 (412)
T ss_dssp -----------GCTTCHHHHHHHHHHHH---CSS-SEEEEECC-----------------------SCCCHHHHHHHH-H
T ss_pred -----------cchhhHHHHHHHHHhcc---CCe-EEEEeccc-----------------------cCCCHHHHHHHH-H
Confidence 11234567787787777 644 456 8883 367899999875 4
Q ss_pred HHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHH
Q 011677 325 LCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEV 403 (479)
Q Consensus 325 ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i 403 (479)
.+++|++.|||||++++|++++++|++++ +||++||+.. ++++++++++.+++|++ ++|+.+ ||||+++++
T Consensus 254 ~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~div------~~d~~~-GGit~~~ki 325 (412)
T 4h1z_A 254 AMEPHGLWFAEAPVRTEDIDGLARVAASVSTAIAVGEEWR-TVHDMVPRVARRALAIV------QPEMGH-KGITQFMRI 325 (412)
T ss_dssp HHGGGCEEEEECCSCTTCHHHHHHHHHHCSSEEEECTTCC-SHHHHHHHHHTTCCSEE------CCCHHH-HHHHHHHHH
T ss_pred hhcccccceecCCCCccchHHHHHHHhhcCCccccCCccc-chHhHHHHHHcCCCCEE------EecCCC-CChHHHHHH
Confidence 58999999999999999999999999999 9999999865 59999999999999999 999986 999999999
Q ss_pred HHHHhhCCCeEEEecCCCCCchh--HHHHhHhhcC
Q 011677 404 VKLANDVPWGVVISHRSGETEDS--FIADLSVGLA 436 (479)
Q Consensus 404 ~~~A~~~g~~~~v~h~~get~d~--~~~dlAv~~~ 436 (479)
+++|+++|++++ .|+..++... +.+|++.++.
T Consensus 326 a~~A~~~gi~v~-~h~~~~~~i~~aa~lhl~aa~~ 359 (412)
T 4h1z_A 326 GAYAHVHHIKVI-PHATIGAGIFLAASLQASAALA 359 (412)
T ss_dssp HHHHHHTTCEEC-CCCCSSCSHHHHHHHHHHHHCT
T ss_pred HHHHHHCCCcEE-ecCCcchHHHHHHHHHHHHhCC
Confidence 999999999975 4655566444 5566666653
No 28
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2e-42 Score=357.63 Aligned_cols=293 Identities=15% Similarity=0.144 Sum_probs=228.1
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.+ +++++|+|+|++|++ |+||+.++.. +.|.++++.+++.
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~----------G~GE~~~~~~---~~~~~e~~~~~~~ 85 (386)
T 1wue_A 19 HMNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQ----------GFGELVAFEQ---PDYVQETLVTERF 85 (386)
T ss_dssp CCCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCE----------EEEEECCCSS---TTSSSCCHHHHHH
T ss_pred cCEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCE----------EEEEeecCCC---CcccCCcHHHHHH
Confidence 6899999998772 3332 357999999999984 9999876532 4688999999988
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+++.++|.|+|+|+.+++++|+.|..+.+ +.+|++|||+||||+.||..|+|||++||| . +.++|++.
T Consensus 86 ~i~~~l~p~l~G~d~~~~~~l~~~l~~~~g-------~~~A~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~v~~~~ 154 (386)
T 1wue_A 86 IIQQHLIPLLLTEAIEQPQEVSTIFEEVKG-------HWMGKAALETAIWDLYAKRQQKSLTEFFGP---T-RRKIPVGI 154 (386)
T ss_dssp HHHHTHHHHHTTSCCCSTHHHHHHGGGSCS-------CHHHHHHHHHHHHHHHHHHTTSBGGGGSSS---C-CSEEECCE
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhCC---C-CCeeEeeE
Confidence 898889999999999999999998865432 157999999999999999999999999998 2 45677654
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
.++.+ .+.++ ..+++.+...++|+.+| .|. | + +.+.+.++.||+
T Consensus 155 --~~g~~------~~~~~---------~~~~a~~~~~~G~~~~K----iKv-------g------~--~~d~~~v~avr~ 198 (386)
T 1wue_A 155 --SLGIQ------EDLPQ---------LLKQVQLAVEKGYQRVK----LKI-------R------P--GYDVEPVALIRQ 198 (386)
T ss_dssp --EECCC------SCHHH---------HHHHHHHHHHTTCSCEE----EEC-------B------T--TBSHHHHHHHHH
T ss_pred --EecCC------CCHHH---------HHHHHHHHHHhhhheEE----Eee-------C------c--HHHHHHHHHHHH
Confidence 22111 01222 23455555556666655 342 2 1 234667777777
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++. + .++ +|+|. .||.+++ ++ .+.+++|+|.|||||++++|+++|++|+
T Consensus 199 a~~----~-~~l~vDaN~-----------------------~~~~~~a-~~-~~~l~~~~i~~iEqP~~~~d~~~~~~l~ 248 (386)
T 1wue_A 199 HFP----N-LPLMVDANS-----------------------AYTLADL-PQ-LQRLDHYQLAMIEQPFAADDFLDHAQLQ 248 (386)
T ss_dssp HCT----T-SCEEEECTT-----------------------CCCGGGH-HH-HHGGGGSCCSCEECCSCTTCSHHHHHHH
T ss_pred hCC----C-CeEEEeCCC-----------------------CCCHHHH-HH-HHHHHhCCCeEEeCCCCcccHHHHHHHH
Confidence 651 2 356 99842 4566777 66 5678999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA 429 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~ 429 (479)
+++ +||++||+..+ +++++++++.+++|++ ++|++++||||++++++++|+++|+++|++|+. |+..+..+
T Consensus 249 ~~~~ipIa~dE~~~~-~~~~~~~i~~~a~d~i------~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~-es~i~~aa 320 (386)
T 1wue_A 249 RELKTRICLDENIRS-LKDCQVALALGSCRSI------NLKIPRVGGIHEALKIAAFCQENDLLVWLGGMF-ESGVGRAL 320 (386)
T ss_dssp TTCSSCEEECTTCCS-HHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCC-CCHHHHHH
T ss_pred HhcCCCEEeCCccCC-HHHHHHHHHcCCCCEE------EEchhhhCCHHHHHHHHHHHHHCCCeEEECCCc-ccHHHHHH
Confidence 999 99999998654 9999999999999999 999999999999999999999999999887764 67665555
Q ss_pred HhHhh
Q 011677 430 DLSVG 434 (479)
Q Consensus 430 dlAv~ 434 (479)
.++++
T Consensus 321 ~~hla 325 (386)
T 1wue_A 321 NLQFA 325 (386)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 29
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=7.6e-42 Score=352.57 Aligned_cols=299 Identities=17% Similarity=0.132 Sum_probs=228.1
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ +..+.|+|+|++|++ |+||+.++.. +.|++++...+...
T Consensus 6 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~---~~y~~e~~~~~~~~ 72 (382)
T 3dgb_A 6 SAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIE----------GLGESTTIGG---LAYGNESPDSIKTN 72 (382)
T ss_dssp TBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEEECSTT---TTSSSCCHHHHHHH
T ss_pred CeeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCE----------EEEecccCCC---CccCCCCHHHHHHH
Confidence 469999998873 3333 357899999999994 9999987532 45788888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
|++.++|.|+|+||.+.+++|+.|.+... +. .+|++|||+||||+.||..|+|||++||| ..+.++|+ |
T Consensus 73 i~~~l~p~liG~d~~~~~~~~~~l~~~~~----g~--~~A~said~ALwDl~gk~~g~Pv~~LLGg---~~r~~v~~--~ 141 (382)
T 3dgb_A 73 IDRFVAPLLIGQDASNINAAMLRLEQSIR----GN--TFAKSGIESALLDAQGKRLGLPVSELLGG---RVRDALPV--A 141 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHHCC----SC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEEB--C
T ss_pred HHHHHHHHhcCCCccCHHHHHHHHHHHhc----Cc--hHHHHHHHHHHHHHHHHHcCCCHHHHhCC---CCCCeeeE--E
Confidence 88889999999999999999999986321 11 57999999999999999999999999998 33456665 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHH-HHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGS-ETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~-e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++.| +. ...++++.+... .+|+.+| .|.|. .+.+.+.+.++.||+
T Consensus 142 ~t~~~~-------~~---------~~~~~~~~~~~~~~G~~~~K----iKvg~------------~~~~~d~~~v~avR~ 189 (382)
T 3dgb_A 142 WTLASG-------DT---------AKDIAEAQKMLDLRRHRIFK----LKIGA------------GEVDRDLAHVIAIKK 189 (382)
T ss_dssp EEECSS-------CH---------HHHHHHHHHHHHTTSCSEEE----EECCS------------SCHHHHHHHHHHHHH
T ss_pred EEecCC-------Ch---------HHHHHHHHHHHHhCCCCEEE----EeeCC------------CCHHHHHHHHHHHHH
Confidence 333222 00 112334444333 2455444 44331 112345666777777
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||++++|++++++|+
T Consensus 190 a~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~ 241 (382)
T 3dgb_A 190 AL---GDS-ASVRVDVN-----------------------QAWDEAVALRAC-RILGGNGIDLIEQPISRNNRAGMVRLN 241 (382)
T ss_dssp HH---GGG-SEEEEECT-----------------------TCBCHHHHHHHH-HHHHTTTCCCEECCBCTTCHHHHHHHH
T ss_pred Hc---CCC-CeEEEeCC-----------------------CCCCHHHHHHHH-HHHhhcCcCeeeCCCCccCHHHHHHHH
Confidence 66 533 345 8983 367889999875 558999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--H
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--F 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~ 427 (479)
+++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+..+ +
T Consensus 242 ~~~~ipIa~dE~~~-~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~es~ig~aa 313 (382)
T 3dgb_A 242 ASSPAPIMADESIE-CVEDAFNLAREGAASVF------ALKIAKNGGPRATLRTAAIAEAAGIGLYGGTM-LEGGIGTLA 313 (382)
T ss_dssp HHCSSCEEESTTCS-SHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEEEECCS-CCCHHHHHH
T ss_pred HhCCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCeEeecCC-CccHHHHHH
Confidence 999 9999999865 59999999999999999 99999999999999999999999999977665 466554 5
Q ss_pred HHHhHhhc
Q 011677 428 IADLSVGL 435 (479)
Q Consensus 428 ~~dlAv~~ 435 (479)
.+||+.++
T Consensus 314 ~~hlaaa~ 321 (382)
T 3dgb_A 314 SAHAFLTL 321 (382)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHcC
Confidence 55665554
No 30
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=1.4e-41 Score=351.51 Aligned_cols=306 Identities=16% Similarity=0.114 Sum_probs=223.5
Q ss_pred CceeeEEEEEEEecCC----CCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHH
Q 011677 44 PSVITKIKARQILDSR----GIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISE 119 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~----g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p 119 (479)
+|+|++|+++.+--.. .++.+.|+|+|++|++ |+||+. .++++..++..+.+.++|
T Consensus 2 ~MkI~~i~~~~~~~p~~~~~~~~~~~V~v~td~G~~----------G~GE~~----------~~~~~~~~~~~~~~~l~p 61 (393)
T 4dwd_A 2 SLKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGTV----------GWGEAS----------PMLGGIASLGVVARDIAP 61 (393)
T ss_dssp CCBEEEEEEEEEECCC-----CEEEEEEEEETTSCE----------EEEEEC----------CGGGGHHHHHHHHHHTHH
T ss_pred CCEEEEEEEEEEcCCCcccccceEEEEEEEECCCCE----------EEEEcc----------CcHHHHHHHHHHHHHHHH
Confidence 4799999999985330 0457999999999994 999975 133455553443455999
Q ss_pred hhcCCCCCCHHHHHHHHHhhh-ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCC
Q 011677 120 ALVGMDPILQSQIDQAMIDLD-KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGG 198 (479)
Q Consensus 120 ~LiG~d~~~~~~id~~l~~~~-~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG 198 (479)
.|+|+||.+.+++|+.|.+.. ..+ .+++..+|++|||+||||+.||.+|+|||++||| ..+.+ +|+|..++|+
T Consensus 62 ~liG~d~~~~e~~~~~l~~~~~~~g-~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg---~~r~~--v~~y~s~~g~ 135 (393)
T 4dwd_A 62 FLEGQEVLDHAVLLDRMMHRLVKLG-PEGIATAALAACDIALWDLKGKLLGQPIYKLLGG---AWRTR--LPCYSSIGGN 135 (393)
T ss_dssp HHTTSBGGGHHHHHHHHHHHTGGGC-CTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSE--EEEEEEECCC
T ss_pred HHCCCCcccHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCC---CCCCc--eeeEEecCcc
Confidence 999999999999999998632 222 2346678999999999999999999999999998 33344 5556665332
Q ss_pred ccCCCcccccceeeccCCCCcHHHH-HHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcC
Q 011677 199 KHAGNNLAIQDIMILPIGASSFGEA-LQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTG 277 (479)
Q Consensus 199 ~~~~~~l~~~e~~i~p~~~~~~~ea-~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g 277 (479)
... + . +...+++ .+...++|+.+| .|.|..... ...+.+.+.+.++.||+++ |
T Consensus 136 ~~~----~-~--------e~~~~~a~~~~~~~G~~~~K----lKvG~~~~~------~~~~~~~d~~~v~avR~a~---g 189 (393)
T 4dwd_A 136 AAR----S-V--------DEVVREVARRVEAEQPAAVK----IRWDGDRTR------CDVDIPGDIAKARAVRELL---G 189 (393)
T ss_dssp SSS----C-H--------HHHHHHHHHHHHHHCCSEEE----EECCCCTTC------CSCCHHHHHHHHHHHHHHH---C
T ss_pred CCC----C-H--------HHHHHHHHHHHHHcCCCEEE----EccCCCCcc------cccCHHHHHHHHHHHHHHh---C
Confidence 100 0 1 1223344 444455666655 454421000 0012334455566666555 6
Q ss_pred CCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hh
Q 011677 278 IPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQ 355 (479)
Q Consensus 278 ~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~ 355 (479)
.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|++++ +|
T Consensus 190 ~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iP 244 (393)
T 4dwd_A 190 PD-AVIGFDAN-----------------------NGYSVGGAIRVG-RALEDLGYSWFEEPVQHYHVGAMGEVAQRLDIT 244 (393)
T ss_dssp TT-CCEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCSEEECCSCTTCHHHHHHHHHHCSSE
T ss_pred CC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEECCCCcccHHHHHHHHhhCCCC
Confidence 44 456 8883 367889999875 558999999999999999999999999999 99
Q ss_pred hhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HHHHhHh
Q 011677 356 VVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FIADLSV 433 (479)
Q Consensus 356 I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~~dlAv 433 (479)
|++||+.. ++++++++++.+ +|++ ++|++++||||++++++++|+++|+++++ |+. ++..+ +.+|||.
T Consensus 245 Ia~dE~~~-~~~~~~~~i~~~-~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~-~~~i~~aa~~hlaa 314 (393)
T 4dwd_A 245 VSAGEQTY-TLQALKDLILSG-VRMV------QPDIVKMGGITGMMQCAALAHAHGVEFVP-HQT-QPGVGHFANIHVLS 314 (393)
T ss_dssp EEBCTTCC-SHHHHHHHHHHT-CCEE------CCCTTTTTHHHHHHHHHHHHHHHTCEECC-CCC-CSSHHHHHHHHHHH
T ss_pred EEecCCcC-CHHHHHHHHHcC-CCEE------EeCccccCCHHHHHHHHHHHHHcCCEEee-cCC-CcHHHHHHHHHHHH
Confidence 99999864 599999999999 9999 99999999999999999999999999865 555 56554 5556665
Q ss_pred hcC
Q 011677 434 GLA 436 (479)
Q Consensus 434 ~~~ 436 (479)
++.
T Consensus 315 a~p 317 (393)
T 4dwd_A 315 TLM 317 (393)
T ss_dssp TCT
T ss_pred hCC
Confidence 543
No 31
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=1.8e-41 Score=351.91 Aligned_cols=310 Identities=17% Similarity=0.158 Sum_probs=225.6
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|++..+- ..+...+.|+|+|++|++ |+||+.. .+. ...+...|++.++|.|+|
T Consensus 5 ~mkIt~v~~~~~~-~~~~~~~~V~v~td~G~~----------G~GE~~~-------~~~---~~~~~~~i~~~l~p~liG 63 (401)
T 3sbf_A 5 ETIISDIHCIITK-PDRHNLITVVVETNEGVT----------GFGCATF-------QQR---PLAVKTMVDEYLKPILIG 63 (401)
T ss_dssp CCBEEEEEEEEEC-SSSSCEEEEEEEETTSCE----------EEEECCC-------TTS---HHHHHHHHHHTHHHHHTT
T ss_pred CeEEEEEEEEEEc-CCCceEEEEEEEeCCCCE----------EEEcccc-------CCC---HHHHHHHHHHHHHHHHcC
Confidence 6799999998773 223368999999999994 9999753 122 234455677779999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+.+++|+.|.+.. .+..+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+.++++
T Consensus 64 ~d~~~~e~~~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~----- 132 (401)
T 3sbf_A 64 KNANNIEDLWQMMMVNA-YWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFGG---KSRDAIPV--YTHATSD----- 132 (401)
T ss_dssp SBTTCHHHHHHHHHHTT-SSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTC---CSSSSEEE--EEEEEES-----
T ss_pred CChhhHHHHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhCC---CcCCeeeE--EEeCCCC-----
Confidence 99999999999998632 1222345578999999999999999999999999998 33455554 6543321
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccC--------CCCCCCCC---CCchHHHHHHHHHH
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVG--------EDGGLAPN---ISSIREGLDLVKEA 272 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg--------~~G~~~~~---~~~~~~~l~~v~~a 272 (479)
+. +...+++.+...++|+.+| .|.|....... ..|.+... ++.+.+.++.||++
T Consensus 133 --~~---------e~~~~~a~~~~~~G~~~~K----~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a 197 (401)
T 3sbf_A 133 --TM---------EGIYDLVEGFLEKGYKHIR----CQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREK 197 (401)
T ss_dssp --SH---------HHHHHHHHHHHHTTCCEEE----EEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 11 1234444445555676655 56553211000 00000000 12234555556655
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|++
T Consensus 198 ~---G~d-~~l~vDan-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~~~~~~~~l~~ 249 (401)
T 3sbf_A 198 Y---GNQ-FHILHDVH-----------------------ERLFPNQAIQFA-KEVEQYKPYFIEDILPPNQTEWLDNIRS 249 (401)
T ss_dssp H---TTS-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSCEECSSCTTCGGGHHHHHT
T ss_pred c---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCChhHHHHHHHHHh
Confidence 5 644 456 8883 367889999875 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCC-CCch--hH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSG-ETED--SF 427 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~g-et~d--~~ 427 (479)
++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++ .|++. ++.. ++
T Consensus 250 ~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~~k~~~~GGit~~~kia~~A~~~gi~~~-~h~~~~~s~i~~aA 321 (401)
T 3sbf_A 250 QSSVSLGLGELFN-NPEEWKSLIANRRIDFI------RCHVSQIGGITPALKLGHLCQNFGVRIA-WHCAPDMTPIGAAV 321 (401)
T ss_dssp TCCCCEEECTTCC-SHHHHHHHHHTTCCSEE------CCCGGGGTSHHHHHHHHHHHHHHTCEEC-CCCCTTSCHHHHHH
T ss_pred hCCCCEEeCCccC-CHHHHHHHHhcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCEEE-ecCCcccchHHHHH
Confidence 99 9999999864 59999999999999999 9999999999999999999999999975 56554 5544 45
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+|||.++.
T Consensus 322 ~~hlaaa~p 330 (401)
T 3sbf_A 322 NTHLNVHLH 330 (401)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHhCC
Confidence 677776653
No 32
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=9.3e-42 Score=350.29 Aligned_cols=296 Identities=19% Similarity=0.199 Sum_probs=231.7
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ .+++.|+|+|++|+ +|+||+.++ +.|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~~~~~~~~~~ 65 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGA----------VGWGEAPPT-----LVITGDSMDSIESA 65 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------EEEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHHH
Confidence 689999988772 2333 35799999999998 499998764 35778888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+|+.+++++|+.|.+... + ..+|++|||+||||+.||..|+|||++||| . +.++|++
T Consensus 66 l~~~l~~~l~g~~~~~~~~~~~~l~~~~~----~--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~v~~~-- 133 (366)
T 1tkk_A 66 IHHVLKPALLGKSLAGYEAILHDIQHLLT----G--NMSAKAAVEMALYDGWAQMCGLPLYQMLGG---Y-RDTLETD-- 133 (366)
T ss_dssp HHHTHHHHHTTCBGGGHHHHHHHHHHSSS----S--CHHHHHHHHHHHHHHHHHHTTSBHHHHHTC---C-CSEEEBC--
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhc----C--CHHHHHHHHHHHHHHHHHHcCCCHHHHhCC---C-CCceeee--
Confidence 98879999999999999999999875321 1 257999999999999999999999999998 2 4566664
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
..++++ +.++ ..+++.+...++|+.+| .|.| . ++.+.+.+.++.||++
T Consensus 134 ~~~~~~-------~~~~---------~~~~a~~~~~~Gf~~iK----ik~g-------~-----~~~~~d~~~v~avr~a 181 (366)
T 1tkk_A 134 YTVSVN-------SPEE---------MAADAENYLKQGFQTLK----IKVG-------K-----DDIATDIARIQEIRKR 181 (366)
T ss_dssp EEECSC-------CHHH---------HHHHHHHHHHHTCCEEE----EECC-------S-----SCHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHH---------HHHHHHHHHHcCCCeEE----EEeC-------C-----CCHHHHHHHHHHHHHH
Confidence 333332 1121 24455555555666655 3433 1 1233456666666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhh--CCceeeecCCCccCHHHHHHH
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCAD--YPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~--~~i~~iEdP~~~~D~~g~~~L 349 (479)
+ |.+ ..+ +|+| +.||.+++++++. .+++ |++.|||||++++|+++|++|
T Consensus 182 ~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~~~i~~iEqP~~~~d~~~~~~l 233 (366)
T 1tkk_A 182 V---GSA-VKLRLDAN-----------------------QGWRPKEAVTAIR-KMEDAGLGIELVEQPVHKDDLAGLKKV 233 (366)
T ss_dssp H---CSS-SEEEEECT-----------------------TCSCHHHHHHHHH-HHHHTTCCEEEEECCSCTTCHHHHHHH
T ss_pred h---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHhhcCCCceEEECCCCcccHHHHHHH
Confidence 6 644 456 8883 3578899998765 5899 999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++++ +||++||+. +++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++|+ .||..+..
T Consensus 234 ~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~~ 305 (366)
T 1tkk_A 234 TDATDTPIMADESV-FTPRQAFEVLQTRSADLI------NIKLMKAGGISGAEKINAMAEACGVECMVGSM-IETKLGIT 305 (366)
T ss_dssp HHHCSSCEEECTTC-CSHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCCEEECCS-SCCHHHHH
T ss_pred HhhCCCCEEEcCCC-CCHHHHHHHHHhCCCCEE------EeehhhhcCHHHHHHHHHHHHHcCCcEEecCc-cccHHHHH
Confidence 9999 999999986 569999999999999999 99999999999999999999999999988775 68887766
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
++++++.
T Consensus 306 a~~~laa 312 (366)
T 1tkk_A 306 AAAHFAA 312 (366)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 33
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=2.5e-41 Score=352.82 Aligned_cols=310 Identities=15% Similarity=0.183 Sum_probs=224.9
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|+...+- .++..+.|+|+|++|++ |+||+... +. ...+...|++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~~--~~~~~v~V~v~td~Gi~----------G~GE~~~~-------~~---~~~~~~~i~~~l~p~LiG 79 (424)
T 3v3w_A 22 SMKIVDAKVIVTC--PGRNFVTLKIVTDQGIY----------GIGDATLN-------GR---EKSVVSYLEDYLIPVLIG 79 (424)
T ss_dssp -CCEEEEEEEEEC--SSSCEEEEEEEETTSCE----------EEEECCCT-------TC---HHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEEc--CCCCEEEEEEEECCCCE----------EEEeccCC-------CC---hHHHHHHHHHHHHHHhcC
Confidence 5799999998763 34578999999999994 99997431 11 234455677779999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+++++|+.|.+.. ....+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+.+++.
T Consensus 80 ~dp~~ie~i~~~~~~~~-~~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~----- 148 (424)
T 3v3w_A 80 RDPQQIEDIWQFFYRGA-YWRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLGG---KSRERILS--YTHANGK----- 148 (424)
T ss_dssp SCTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHTC---CSCSSEEE--EEEEEES-----
T ss_pred CChhhHHHHHHHHHhcc-ccCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---cCCCceeE--EEeCCCC-----
Confidence 99999999999998632 1222345568999999999999999999999999998 33455555 5543321
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCC----cccCCC-CCCC------CC---------CCchH
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHG----CNVGED-GGLA------PN---------ISSIR 263 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~----~~vg~~-G~~~------~~---------~~~~~ 263 (479)
+. +...+++.+...++|+++| .|.|... .+.... ..+. |. ++.+.
T Consensus 149 --~~---------e~~~~~a~~~~~~Gf~~iK----lKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 149 --DL---------DSTLEAVRKAKDKGYKAIR----VQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp --SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EeccCccccccccccccccccccccccccccccccchhHHHHHH
Confidence 11 1234455555556676665 5655310 000000 0011 11 12234
Q ss_pred HHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccC
Q 011677 264 EGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKED 342 (479)
Q Consensus 264 ~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D 342 (479)
+.++.||+++ |.+ ..| +|+| +.||.++++++. +.++++++.|||||++++|
T Consensus 214 e~v~avR~av---G~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~d 265 (424)
T 3v3w_A 214 DVFAAVRKEF---GPD-IHLLHDVH-----------------------HRLTPIEAARLG-KALEPYHLFWMEDAVPAEN 265 (424)
T ss_dssp HHHHHHHHHH---CSS-SEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCCSS
T ss_pred HHHHHHHHHc---CCC-CcEEEeCC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCChHh
Confidence 5555555555 644 456 8883 367899999875 5589999999999999999
Q ss_pred HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCC
Q 011677 343 WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSG 421 (479)
Q Consensus 343 ~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~g 421 (479)
++++++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|++++++++..
T Consensus 266 ~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~ga~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~ 338 (424)
T 3v3w_A 266 QESFKLIRQHTTTPLAVGEVFN-SIHDCRELIQNQWIDYI------RTTIVHAGGISQMRRIADFASLFHVRTGFHGATD 338 (424)
T ss_dssp TTHHHHHHHHCCSCEEECTTCC-SGGGTHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCTT
T ss_pred HHHHHHHHhhCCCCEEEccCcC-CHHHHHHHHHcCCCCeE------eecchhcCCHHHHHHHHHHHHHcCCEEEecCCCc
Confidence 99999999999 9999999864 59999999999999999 9999999999999999999999999986644432
Q ss_pred CCch--hHHHHhHhhcC
Q 011677 422 ETED--SFIADLSVGLA 436 (479)
Q Consensus 422 et~d--~~~~dlAv~~~ 436 (479)
++.. ++.+|||.++.
T Consensus 339 ~s~ig~aA~~hlaaa~p 355 (424)
T 3v3w_A 339 LSPVCMGAALHFDYWVP 355 (424)
T ss_dssp SCHHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHHHHHhCC
Confidence 4544 45677776653
No 34
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=6.1e-41 Score=348.71 Aligned_cols=317 Identities=14% Similarity=0.090 Sum_probs=224.5
Q ss_pred ceeeEEEEEEEecC----CCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHh
Q 011677 45 SVITKIKARQILDS----RGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEA 120 (479)
Q Consensus 45 ~~I~~I~~~~i~ds----~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~ 120 (479)
|+|++|+++.+--. .++..+.|+|+|++|++ |+||+... .+. ...+...+++.++|.
T Consensus 1 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~----------G~GE~~~~------~~~---~~~~~~~i~~~l~p~ 61 (412)
T 4e4u_A 1 MKIVSLETHIVAVPPPHVGGMYWIFVKLKTDDGIE----------GVGEIYSA------TFG---PKAMAPIIDDVFERH 61 (412)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCE----------EEEEECCC------SSC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEccCCCccCCCceEEEEEEECCCCE----------EEEeecCC------CCC---HHHHHHHHHHHhHHH
Confidence 69999999998532 24568999999999994 99998542 122 234455677788999
Q ss_pred hcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCcc
Q 011677 121 LVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKH 200 (479)
Q Consensus 121 LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~ 200 (479)
|+|+||.+.+++|+.|++.......+....+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+.+..+.
T Consensus 62 LiG~dp~~~e~~~~~l~~~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--yas~~~~~- 135 (412)
T 4e4u_A 62 LLNRDPHHVERLFRQAYSSGFTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLGG---RIHERLRS--YTYLYPKN- 135 (412)
T ss_dssp TTTSCTTCHHHHHHHHHHTTTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTC---CCCSSEEE--EEECCCBC-
T ss_pred hCCCChhHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcCC---CcCCeeEE--EEeccCCc-
Confidence 9999999999999999763211111223467999999999999999999999999998 33455555 54432110
Q ss_pred CCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCC---CCchHHHHHHHHHHHHhcC
Q 011677 201 AGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPN---ISSIREGLDLVKEAINRTG 277 (479)
Q Consensus 201 ~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~---~~~~~~~l~~v~~ai~~~g 277 (479)
....... ...+...+++.+...++|+++| .|.|.... +..| ..+. .+.+.+.++.||+++ |
T Consensus 136 ~~~~~~~------~~~e~~~~~a~~~~~~G~~~iK----lK~g~~~~--~~~g-~~~~~~~~~~d~~~v~avR~a~---G 199 (412)
T 4e4u_A 136 AKGEYDY------DDPDLAAECAAENVKLGFTAVK----FDPAGPYT--AYSG-HQLSLEVLDRCELFCRRVREAV---G 199 (412)
T ss_dssp TTSCBCS------SCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCC-BCCCHHHHHHHHHHHHHHHHHH---T
T ss_pred ccccccC------CCHHHHHHHHHHHHHcCCCEEE----ECCCCCCc--cccc-cccchhhHHHHHHHHHHHHHHh---C
Confidence 0000000 0111233445555555666655 45442111 1111 1221 223445555555555 6
Q ss_pred CCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hh
Q 011677 278 IPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQ 355 (479)
Q Consensus 278 ~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~ 355 (479)
.+ ..| +|+| +.||.++++++. +.++++++.|||||++++|++++++|++++ +|
T Consensus 200 ~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iP 254 (412)
T 4e4u_A 200 SK-ADLLFGTH-----------------------GQMVPSSAIRLA-KRLEKYDPLWFEEPVPPGQEEAIAQVAKHTSIP 254 (412)
T ss_dssp TS-SEEEECCC-----------------------SCBCHHHHHHHH-HHHGGGCCSEEECCSCSSCHHHHHHHHHTCSSC
T ss_pred CC-CeEEEECC-----------------------CCCCHHHHHHHH-HHhhhcCCcEEECCCChhhHHHHHHHHhhCCCC
Confidence 44 455 8873 367889999875 558999999999999999999999999999 99
Q ss_pred hhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHh
Q 011677 356 VVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADLSV 433 (479)
Q Consensus 356 I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv 433 (479)
|++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++ +.|+. ++.. ++.+|||.
T Consensus 255 Ia~dE~~~-~~~~~~~~i~~~a~d~v------~~d~~~~GGit~~~kia~~A~~~gi~v-~~h~~-~s~i~~aa~~hlaa 325 (412)
T 4e4u_A 255 IATGERLT-TKYEFHKLLQAGGASIL------QLNVARVGGLLEAKKIATLAEVHYAQI-APHLY-NGPVGAAASIQLAT 325 (412)
T ss_dssp EEECTTCC-HHHHHHHHHHTTCCSEE------CCCTTTTTSHHHHHHHHHHHHHTTCEE-CCCCC-SCHHHHHHHHHHHH
T ss_pred EEecCccC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEE-EecCC-CcHHHHHHHHHHHH
Confidence 99999864 59999999999999999 999999999999999999999999997 55654 3444 45666666
Q ss_pred hcC
Q 011677 434 GLA 436 (479)
Q Consensus 434 ~~~ 436 (479)
++.
T Consensus 326 a~p 328 (412)
T 4e4u_A 326 CTP 328 (412)
T ss_dssp TCT
T ss_pred hCC
Confidence 653
No 35
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=2.1e-41 Score=353.05 Aligned_cols=309 Identities=17% Similarity=0.179 Sum_probs=225.5
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|+...+. .++..+.|+|+|++|++ |+||+... +. ...+...|++.++|.|+|
T Consensus 16 ~mkIt~v~~~~~~--~~~~~~~V~v~td~G~~----------G~GE~~~~-------~~---~~~~~~~i~~~l~p~LiG 73 (418)
T 3r4e_A 16 HMKITAARVIITC--PGRNFVTLKIETDQGVY----------GIGDATLN-------GR---ELSVVAYLQEHVAPCLIG 73 (418)
T ss_dssp CCCEEEEEEEEEC--SSSCEEEEEEEETTSCE----------EEEECCCT-------TC---HHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEEc--CCCcEEEEEEEECCCCE----------EEEeccCC-------CC---hHHHHHHHHHHHHHHhcC
Confidence 6899999998763 34578999999999994 99997431 11 234455677779999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+.+++|+.|.+.. ....+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+.+++.
T Consensus 74 ~dp~~ie~l~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~----- 142 (418)
T 3r4e_A 74 MDPRRIEDIWQYVYRGA-YWRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLGG---RSRDGIMV--YGHANGS----- 142 (418)
T ss_dssp SCTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTC---CSCSSEEE--EEEEEES-----
T ss_pred CChhhHHHHHHHHHHhc-ccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCC---ccCCeeeE--EEeCCCC-----
Confidence 99999999999998632 1222345568999999999999999999999999998 33455555 5543321
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCc----ccCC--------CCCCCCC---------CCch
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGC----NVGE--------DGGLAPN---------ISSI 262 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~----~vg~--------~G~~~~~---------~~~~ 262 (479)
+. +...+++.+...++|+++| .|.|.... +.++ .|+ .|. ++.+
T Consensus 143 --~~---------e~~~~~a~~~~~~Gf~~~K----~k~G~~~~~~~~g~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~d 206 (418)
T 3r4e_A 143 --DI---------AETVEAVGHYIDMGYKAIR----AQTGVPGIKDAYGVGRGKLYYEPADAS-LPSVTGWDTRKALNYV 206 (418)
T ss_dssp --SH---------HHHHHHHHHHHHTTCSEEE----EEECCTTC------------------C-CCCEEEECHHHHHHHH
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEE----EecCCcccccccccccccccccccccc-ccccccccchhHHHHH
Confidence 11 1234445555556676665 56553110 0000 000 011 1223
Q ss_pred HHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCcc
Q 011677 263 REGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKE 341 (479)
Q Consensus 263 ~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~ 341 (479)
.+.++.||+++ |.+ ..| +|+| +.||.++++++. +.++++++.|||||++++
T Consensus 207 ~~~v~avR~a~---G~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~ 258 (418)
T 3r4e_A 207 PKLFEELRKTY---GFD-HHLLHDGH-----------------------HRYTPQEAANLG-KMLEPYQLFWLEDCTPAE 258 (418)
T ss_dssp HHHHHHHHHHH---CSS-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEESCSCCS
T ss_pred HHHHHHHHHHc---CCC-CeEEEeCC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEECCCCcc
Confidence 45555555555 644 455 8883 367889999875 558999999999999999
Q ss_pred CHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCC
Q 011677 342 DWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRS 420 (479)
Q Consensus 342 D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ 420 (479)
|++++++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|++++++++.
T Consensus 259 d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~l~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 259 NQEAFRLVRQHTVTPLAVGEIFN-TIWDAKDLIQNQLIDYI------RATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp SGGGGHHHHHHCCSCEEECTTCC-SGGGTHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CHHHHHHHHhcCCCCEEEcCCcC-CHHHHHHHHHcCCCCeE------ecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 999999999999 9999999865 59999999999999999 999999999999999999999999998664443
Q ss_pred CCCch--hHHHHhHhhcC
Q 011677 421 GETED--SFIADLSVGLA 436 (479)
Q Consensus 421 get~d--~~~~dlAv~~~ 436 (479)
.++.. ++.+||+.++.
T Consensus 332 ~~s~ig~aA~~hlaaa~p 349 (418)
T 3r4e_A 332 DLSPVTMGCALHFDTWVP 349 (418)
T ss_dssp TSCHHHHHHHHHHHHHCT
T ss_pred CccHHHHHHHHHHHHhCC
Confidence 24544 45677777653
No 36
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=5.6e-41 Score=345.08 Aligned_cols=297 Identities=18% Similarity=0.182 Sum_probs=223.5
Q ss_pred CceeeEEEEEEEe--------cCCCC-----ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRGI-----PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g~-----~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
||+|++|+.+.+. ++.+. ++++|+|+|++|++ |+||+.... .+..++.
T Consensus 1 M~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~----------G~Ge~~~~g---------~~~~~~~ 61 (371)
T 2ovl_A 1 MSLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGAT----------GLGYTYTVN---------HGGAAVA 61 (371)
T ss_dssp --CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCE----------EEEEEEEES---------SSHHHHH
T ss_pred CCceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCE----------EEEeecCCC---------CchHHHH
Confidence 6899999998872 33332 36899999999984 999987631 1234566
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhh-hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDL-DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~-~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
..+++.++|.|+|+||.+++++|+.|.+. .++. .+++..+|++|||+||||+.||..|+|||++||| . +.++
T Consensus 62 ~~i~~~l~~~l~G~d~~~~~~~~~~l~~~~~~~~-~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~---~~~v 134 (371)
T 2ovl_A 62 TMVDKDLRGCLLGADAEQIEKIWQSMWWRLHYAG-RGGHATSAISAVDIALWDLKGIRARTPLWKLFGG---Y---DPVV 134 (371)
T ss_dssp HHHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTTC-SSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTC---C---CSEE
T ss_pred HHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhcC-CchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C---CCCe
Confidence 66777899999999999999999999763 3222 2446689999999999999999999999999998 2 3356
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLV 269 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v 269 (479)
|+|++ +|.+. .+.++ ..+++.+...++|+.+| .|.| . ++.+.+.+.++.|
T Consensus 135 ~~y~~--~~~~~---~~~e~---------~~~~a~~~~~~Gf~~iK----ik~g-------~-----~~~~~~~e~v~av 184 (371)
T 2ovl_A 135 PVYAG--GIDLE---LPVAD---------LKTQADRFLAGGFRAIK----MKVG-------R-----PDLKEDVDRVSAL 184 (371)
T ss_dssp EEEEE--CCBTT---SCHHH---------HHHHHHHHHHTTCSCEE----EECC-------C-----SSHHHHHHHHHHH
T ss_pred eEEEe--CCCcC---CCHHH---------HHHHHHHHHHcCCCEEE----ECCC-------C-----CCHHHHHHHHHHH
Confidence 66764 33221 12222 23444444444555544 3422 1 1223445666666
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
|+++ |.+ ..+ +|++ +.||.++++++.+ .+++|++.|||||++++|++++++
T Consensus 185 r~a~---G~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~ 236 (371)
T 2ovl_A 185 REHL---GDS-FPLMVDAN-----------------------MKWTVDGAIRAAR-ALAPFDLHWIEEPTIPDDLVGNAR 236 (371)
T ss_dssp HHHH---CTT-SCEEEECT-----------------------TCSCHHHHHHHHH-HHGGGCCSEEECCSCTTCHHHHHH
T ss_pred HHHh---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCEEECCCCcccHHHHHH
Confidence 6666 644 456 8883 3578899998865 589999999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhH
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSF 427 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~ 427 (479)
|++++ +||++||+.. ++++++++++.+++|++ ++|++++||+|++++++++|+++|+++++ |++. .+
T Consensus 237 l~~~~~iPI~~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGi~~~~~i~~~A~~~gi~~~~-h~~~----~a 304 (371)
T 2ovl_A 237 IVRESGHTIAGGENLH-TLYDFHNAVRAGSLTLP------EPDVSNIGGYTTFRKVAALAEANNMLLTS-HGVH----DL 304 (371)
T ss_dssp HHHHHCSCEEECTTCC-SHHHHHHHHHHTCCSEE------CCCTTTTTSHHHHHHHHHHHHHTTCCEEE-CSCH----HH
T ss_pred HHhhCCCCEEeCCCCC-CHHHHHHHHHcCCCCEE------eeCccccCCHHHHHHHHHHHHHcCCeEcc-ccHH----HH
Confidence 99999 9999999865 59999999999999999 99999999999999999999999999876 5443 26
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+|||.++.
T Consensus 305 ~~hlaaa~~ 313 (371)
T 2ovl_A 305 TVHALASVP 313 (371)
T ss_dssp HHHHHTSCT
T ss_pred HHHHHhhCC
Confidence 678877764
No 37
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.8e-41 Score=347.53 Aligned_cols=301 Identities=15% Similarity=0.091 Sum_probs=229.7
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.+ +..+.|+|+|++|++ |+||+.++.. +.|.+++...+..
T Consensus 5 ~MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~---~~~~~e~~~~~~~ 71 (383)
T 3i4k_A 5 DLTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVI----------GYGEGVVPGG---PWWGGESVETMKA 71 (383)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEECCSSS---TTTTSCCHHHHHH
T ss_pred CCEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCE----------EEEecccCCC---CccCCCCHHHHHH
Confidence 4799999998873 3333 457999999999994 9999876522 4588888888888
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+||.+.+++|+.|.+... + ...|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 72 ~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----~--~~~A~said~ALwDl~gk~~g~Pv~~LLGg---~~r~~v~~-- 140 (383)
T 3i4k_A 72 LVDGYLAPVLIGRAVSELAGIMADLERVVA----R--ARYAKAAVDVAMHDAWARSLNVPVRDLLGG---TVRDKVDV-- 140 (383)
T ss_dssp HHHHTTHHHHTTSBGGGHHHHHHHHHHHCC----S--CHHHHHHHHHHHHHHHHHHTTSBGGGGTTC---CSCSEEEB--
T ss_pred HHHhhhhHHHcCCCccCHHHHHHHHHHHhc----C--CHHHHHHHHHHHHHHHHHHcCCCHHHHhCC---CCCCeEEE--
Confidence 898889999999999999999999976321 1 157999999999999999999999999998 33455555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+..++.+ + .....+++.+...+ +|+.+| .|.|. .+.+.+.+.++.||
T Consensus 141 ~~t~~~~-------~---------~~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~avR 188 (383)
T 3i4k_A 141 TWALGVL-------P---------LDVAVAEIEERIEEFGNRSFK----LKMGA------------GDPAEDTRRVAELA 188 (383)
T ss_dssp CEEECSC-------C---------HHHHHHHHHHHHHHHCCSEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred eEEeeCC-------C---------HHHHHHHHHHHHHhcCCcEEE----EeeCC------------CCHHHHHHHHHHHH
Confidence 4333221 1 11234445444444 565555 45431 11233344444444
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|
T Consensus 189 ~a~---g~~-~~l~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l 240 (383)
T 3i4k_A 189 REV---GDR-VSLRIDIN-----------------------ARWDRRTALHYL-PILAEAGVELFEQPTPADDLETLREI 240 (383)
T ss_dssp HTT---TTT-SEEEEECT-----------------------TCSCHHHHHHHH-HHHHHTTCCEEESCSCTTCHHHHHHH
T ss_pred HHc---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCChhhHHHHHHH
Confidence 444 644 356 8883 367889999875 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--h
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--S 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~ 426 (479)
++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+. |+.. +
T Consensus 241 ~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~-es~i~~a 312 (383)
T 3i4k_A 241 TRRTNVSVMADESV-WTPAEALAVVKAQAADVI------ALKTTKHGGLLESKKIAAIAEAGGLACHGATSL-EGPIGTA 312 (383)
T ss_dssp HHHHCCEEEESTTC-SSHHHHHHHHHHTCCSEE------EECTTTTTSHHHHHHHHHHHHHTTCEEEECCSC-CCHHHHH
T ss_pred HhhCCCCEEecCcc-CCHHHHHHHHHcCCCCEE------EEcccccCCHHHHHHHHHHHHHcCCeEEeCCCC-ccHHHHH
Confidence 9999 999999976 459999999999999999 999999999999999999999999999887754 5544 4
Q ss_pred HHHHhHhhcC
Q 011677 427 FIADLSVGLA 436 (479)
Q Consensus 427 ~~~dlAv~~~ 436 (479)
+.+||+.++.
T Consensus 313 a~~hlaaa~p 322 (383)
T 3i4k_A 313 ASLQFAASTK 322 (383)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHcCC
Confidence 5566666653
No 38
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=6.6e-41 Score=346.80 Aligned_cols=301 Identities=15% Similarity=0.132 Sum_probs=223.4
Q ss_pred CceeeEEEEEEEec-------CCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHH
Q 011677 44 PSVITKIKARQILD-------SRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINER 116 (479)
Q Consensus 44 ~~~I~~I~~~~i~d-------s~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~ 116 (479)
+|+|++|+++.+.. ++++++++|+|+|++|++ |+||+.+++ +.++ .....|++
T Consensus 10 ~MkI~~i~~~~~~p~~~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~------~~~~---~~~~~i~~- 69 (391)
T 2qgy_A 10 IGKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIE----------GWGEAFSIN------FREK---GIAIIIKE- 69 (391)
T ss_dssp CCCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCE----------EEEEECCCT------TTHH---HHHHHHHH-
T ss_pred CCEEEEEEEEEecCccccccccCCCcEEEEEEEECCCCE----------EEecccCCC------CChH---HHHHHHHH-
Confidence 37999999999953 235678999999999984 999987641 2333 34445666
Q ss_pred HHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeec
Q 011677 117 ISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVIS 196 (479)
Q Consensus 117 l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~ 196 (479)
++|.|+|+||.+++++|+.|.+++.....+++ .+|++|||+||||+.||..|+|||++||| .. +.++|+|+ +
T Consensus 70 l~p~l~G~d~~~~~~i~~~l~~~~~~~~g~~~-~~a~~aid~AlwDl~ak~~g~Pl~~llGg---~~--~~~vp~~~--~ 141 (391)
T 2qgy_A 70 LFREISNIPNLSIKSFYNKISLLSDGHRGLDF-SSATSAIEIALWDISGKLKNLPLNSLLTK---SP--KPNVPIYA--T 141 (391)
T ss_dssp HHHHHTTCTTCCHHHHHHHHHHHHTTCCCHHH-HHHHHHHHHHHHHHHHHHHTSBHHHHHCS---SC--CSEEEEEE--E
T ss_pred HHHHhcCCChhHHHHHHHHHHhhhhhccCchH-HHHHHHHHHHHHHHHHHHhCCcHHHHcCC---Cc--CCCcceEE--e
Confidence 99999999999999999999763322221234 78999999999999999999999999998 22 34566676 3
Q ss_pred CCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhc
Q 011677 197 GGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRT 276 (479)
Q Consensus 197 GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~ 276 (479)
|+.+.. .+.++ ..+++.+...++|+.+| .|.| +.+ .+.+.+.++.||+++
T Consensus 142 g~~~~~--~~~~~---------~~~~a~~~~~~Gf~~vK----ik~g-----------~~~-~~~~~e~v~avR~a~--- 191 (391)
T 2qgy_A 142 CWSDLK--KDTND---------YLRQIEKFYGKKYGGIK----IYPM-----------LDS-LSISIQFVEKVREIV--- 191 (391)
T ss_dssp CCCSSC--CCHHH---------HHHHHHHHHHTTCSCEE----ECCC-----------CSS-HHHHHHHHHHHHHHH---
T ss_pred cccCCC--CCHHH---------HHHHHHHHHHcCCCEEE----EccC-----------CCh-HHHHHHHHHHHHHHh---
Confidence 433211 11111 23344444444454444 2322 111 123455666666655
Q ss_pred CCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-h
Q 011677 277 GIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-Q 354 (479)
Q Consensus 277 g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~ 354 (479)
|.+ ..| +|++ +.||.++++++.+ .+++|++.|||||++++|++++++|++++ +
T Consensus 192 G~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i 246 (391)
T 2qgy_A 192 GDE-LPLMLDLA-----------------------VPEDLDQTKSFLK-EVSSFNPYWIEEPVDGENISLLTEIKNTFNM 246 (391)
T ss_dssp CSS-SCEEEECC-----------------------CCSCHHHHHHHHH-HHGGGCCSEEECSSCTTCHHHHHHHHHHCSS
T ss_pred CCC-CEEEEEcC-----------------------CCCCHHHHHHHHH-HHHhcCCCeEeCCCChhhHHHHHHHHhhCCC
Confidence 644 456 8883 3578899998865 58999999999999999999999999999 9
Q ss_pred hhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC-chh--HHHHh
Q 011677 355 QVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET-EDS--FIADL 431 (479)
Q Consensus 355 ~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get-~d~--~~~dl 431 (479)
||++||... ++++++++++.+++|+| ++|++++||+|++++++++|+++|++++++++ ++ ..+ +.+||
T Consensus 247 PIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~--~~~~i~~aa~~hl 317 (391)
T 2qgy_A 247 KVVTGEKQS-GLVHFRELISRNAADIF------NPDISGMGGLIDIIEISNEASNNGIFISPHCW--NSMSVSASAMLHV 317 (391)
T ss_dssp CEEECTTCC-SHHHHHHHHHTTCCSEE------CCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC--SCTTHHHHHHHHH
T ss_pred CEEEcCCcC-CHHHHHHHHHcCCCCEE------EECcchhCCHHHHHHHHHHHHHCCCEEeccCC--CCcHHHHHHHHHH
Confidence 999999875 59999999999999999 99999999999999999999999999877654 54 444 55677
Q ss_pred HhhcC
Q 011677 432 SVGLA 436 (479)
Q Consensus 432 Av~~~ 436 (479)
|.++.
T Consensus 318 aaa~~ 322 (391)
T 2qgy_A 318 CSSIP 322 (391)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 66654
No 39
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=1e-41 Score=348.31 Aligned_cols=292 Identities=17% Similarity=0.184 Sum_probs=225.7
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ ++.+.|+|+|++|++ |+||+.+. +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~ge~~~~~~~~ 65 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLV----------GYGEGGPG-----IFITGETLAGTLET 65 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCE----------EEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCE----------EEEeecCC-----CCcCCCCHHHHHHH
Confidence 689999988773 2332 357999999999994 99998764 34677788888877
Q ss_pred HHHHHH---HhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 113 INERIS---EALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 113 i~~~l~---p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
|+ .++ |.|+|+||.+.+++|+.|. ..+ .+|++|||+||||+.||..|+|||++||| . +.++|+
T Consensus 66 i~-~l~~~~p~l~G~d~~~~~~~~~~l~----~~~-----~~A~~aid~AlwDl~gk~~g~Pl~~llGg---~-~~~v~~ 131 (354)
T 3jva_A 66 IE-LFGQAIIGLNPFNIEKIHEVMDKIS----AFA-----PAAKAAIDIACYDLMGQKAQLPLYQLLGG---Y-DNQVIT 131 (354)
T ss_dssp HH-HHHTTSTTCCTTCHHHHHHHHHHHC----SSC-----HHHHHHHHHHHHHHHHHHHTSBHHHHTTC---S-CSEEEC
T ss_pred HH-HHhhcCccccCCCcccHHHHHHHHh----ccc-----HHHHHHHHHHHHHHHHHHcCCcHHHHhhc---c-CCeeee
Confidence 87 899 9999999999999998886 111 46999999999999999999999999998 2 345555
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLV 269 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v 269 (479)
. ..++.+ + .+...+++.+...++|+.+| .|.|. +.+.+.+.++.|
T Consensus 132 ~--~~~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----~K~g~-------------~~~~d~~~v~av 176 (354)
T 3jva_A 132 D--ITLGID-------E---------PNVMAQKAVEKVKLGFDTLK----IKVGT-------------GIEADIARVKAI 176 (354)
T ss_dssp C--EEECSC-------C---------HHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHH
T ss_pred e--EEeCCC-------C---------HHHHHHHHHHHHHhCCCeEE----EEeCC-------------CHHHHHHHHHHH
Confidence 3 222111 0 11234445455555665555 45331 113456666666
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
|+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++
T Consensus 177 R~a~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~L~~~~i~~iEqP~~~~d~~~~~~ 228 (354)
T 3jva_A 177 REAV---GFD-IKLRLDAN-----------------------QAWTPKDAVKAI-QALADYQIELVEQPVKRRDLEGLKY 228 (354)
T ss_dssp HHHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHH-HHTTTSCEEEEECCSCTTCHHHHHH
T ss_pred HHHc---CCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCChhhHHHHHH
Confidence 6666 644 355 8883 367889999876 4579999999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhH
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSF 427 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~ 427 (479)
|++++ +||++||+. +++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++|+.+|+..+.
T Consensus 229 l~~~~~iPIa~dE~~-~~~~~~~~~l~~~~~d~v------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es~i~~ 301 (354)
T 3jva_A 229 VTSQVNTTIMADESC-FDAQDALELVKKGTVDVI------NIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGI 301 (354)
T ss_dssp HHHHCSSEEEESTTC-CSHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCHHHH
T ss_pred HHHhCCCCEEEcCCc-CCHHHHHHHHHcCCCCEE------EECchhcCCHHHHHHHHHHHHHcCCeEEecCCCcccHHHH
Confidence 99999 999999985 569999999999999999 9999999999999999999999999999988877887765
Q ss_pred HHHhHhhc
Q 011677 428 IADLSVGL 435 (479)
Q Consensus 428 ~~dlAv~~ 435 (479)
.+.++++.
T Consensus 302 ~a~~hlaa 309 (354)
T 3jva_A 302 TAAAHLAA 309 (354)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55544444
No 40
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=3.8e-41 Score=348.01 Aligned_cols=299 Identities=17% Similarity=0.119 Sum_probs=222.4
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
.|+|++|+++.+. .+.| +.++.|+|+|++|++ |+||+.. .+++...+..
T Consensus 19 ~MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~----------G~Ge~~~---------~~~~~~~~~~ 79 (388)
T 4h83_A 19 GLTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGII----------GEAYTGD---------EHETMFDIDR 79 (388)
T ss_dssp -CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCE----------EEEEECC---------CCTTHHHHHH
T ss_pred CCEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCE----------EEEEecC---------CcccHHHHHH
Confidence 5799999999883 2222 457999999999984 9999743 2345666777
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhcc-CCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKT-EKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~-~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
.|++.|+|.|+|+||.+++.+|+.|.+.... ...+....+|++|||+||||+.||.+|+|||++||| . +.++|++
T Consensus 80 ~i~~~lap~LiG~dp~~ie~l~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLGg---~-~~~~~~y 155 (388)
T 4h83_A 80 IIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGG---Y-RNELPMI 155 (388)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTC---S-CSEEEEE
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcCC---C-cCceEEE
Confidence 7888999999999999999999999764322 112235578999999999999999999999999998 2 3455554
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
..+ +.+. . + .....+++.+...++|+.+| .|.| + .+.+++.++++.||
T Consensus 156 ~~~----~~~~-~--~---------~~~~~~~~~~~~~~G~~~~K----ikvg----------~--~~~~~d~~~v~avR 203 (388)
T 4h83_A 156 AIG----GYYG-E--P---------LGSIADEMHNYQELGLAGVK----FKVG----------G--LSAAEDAARITAAR 203 (388)
T ss_dssp EEE----CCTT-C--T---------TCSHHHHHHHHHHHTBSEEE----EECS----------S--SCHHHHHHHHHHHH
T ss_pred eec----cccC-C--C---------HHHHHHHHHHHHHcCCceEe----ecCC----------C--CCHHHHHHHHHHHH
Confidence 322 2111 0 0 12234445445555665555 3432 1 12233455666666
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc-cCHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK-EDWEHTKS 348 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~-~D~~g~~~ 348 (479)
+++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||+++ +|++++++
T Consensus 204 ~~~---G~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~~~~iEeP~~~~~d~~~~~~ 255 (388)
T 4h83_A 204 EAA---GDD-FIICIDAN-----------------------QGYKPAVAVDLS-RRIADLNIRWFEEPVEWHNDKRSMRD 255 (388)
T ss_dssp HHH---CSS-SEEEEECT-----------------------TCBCHHHHHHHH-HHTTTSCCCCEESCBCSTTHHHHHHH
T ss_pred Hhc---CCC-eEEEEecC-----------------------cCCCHHHHHHHH-HHhhhcCcceeecCcccccchHHHHH
Confidence 655 755 456 9984 367899999875 45799999999999986 67999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhH
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSF 427 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~ 427 (479)
|++++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|+.+ .+|.. .+.
T Consensus 256 l~~~~~ipIa~dE~~~-~~~~~~~~i~~~a~d~i------~~d~~~~GGit~~~kia~~A~~~gv~v-~~h~~----~~~ 323 (388)
T 4h83_A 256 VRYQGSVPVCAGQTEF-SASGCRDLMETGAIDVC------NFDSSWSGGPTAWLRTAAIATSYDVQM-GHHEE----PQV 323 (388)
T ss_dssp HHHHSSSCEEECTTCS-SHHHHHHHHHHTCCSEE------CCCGGGTTCHHHHHHHHHHHHHTTCEE-CCCSC----HHH
T ss_pred HHhhcCCCccCCcccc-ChHhHHHHHHcCCCCeE------eecceeCCCHHHHHHHHHHHHHCCCEE-EecCH----HHH
Confidence 99999 9999999865 59999999999999999 999999999999999999999999974 55542 345
Q ss_pred HHHhHhhcCC
Q 011677 428 IADLSVGLAS 437 (479)
Q Consensus 428 ~~dlAv~~~~ 437 (479)
.+|++.++..
T Consensus 324 ~~h~~aa~~~ 333 (388)
T 4h83_A 324 STHLLASQPH 333 (388)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHHhhc
Confidence 6788877744
No 41
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=9.4e-41 Score=343.27 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=220.2
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+++.+- .|.+ +..+.|+|+|+ |+ +|+||+.++.. +.|.+++.+++...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~td-G~----------~G~GE~~~~~~---p~~~~e~~~~~~~~ 66 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYSE-GL----------VGVGEGGSVGG---PVWSAECAETIKII 66 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEBT-TB----------CCEEECCCSTT---TTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEEC-Cc----------EEEEEecCCCC---CccCcccHHHHHHH
Confidence 699999998772 3333 45799999985 98 59999877643 56888888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
|++.++|.|+|+||.+.+.+|+.|.+.. . + ...|++|||+||||+.||..|+|||++||| ..+.++|+ +
T Consensus 67 i~~~l~p~liG~d~~~~~~~~~~~~~~~--~--~--~~~A~said~AlwDl~gK~~g~Pl~~lLGg---~~~~~~~~--~ 135 (370)
T 2chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAV--T--G--NASAKAAVEMALLDLKARALGVSIAELLGG---PLRSAIPI--A 135 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHTTC--S--S--CHHHHHHHHHHHHHHHHHHTTCCHHHHTTC---CSCSEEEB--E
T ss_pred HHHHHHHHhcCCCcccHHHHHHHHhhcc--c--c--cHHHHHHHHHHHHHHHHHhcCCccccccCC---ccccccce--e
Confidence 9999999999999999999999987532 1 1 146999999999999999999999999998 33444444 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHH-HHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMG-SETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~-~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..+.++. .. ....+..+.. ..+|+.+ |.| +|. .++.+.++.++.
T Consensus 136 ~~~~~~~-------~~---------~~~~~~~~~~~~~g~~~~----K~K-------vg~--------~~~~~d~~~v~a 180 (370)
T 2chr_A 136 WTLASGD-------TK---------RDLDSAVEMIERRRHNRF----KVK-------LGF--------RSPQDDLIHMEA 180 (370)
T ss_dssp EEECSSC-------HH---------HHHHHHHHHHHTTSCCEE----EEE-------CSS--------SCHHHHHHHHHH
T ss_pred eeeccCc-------hh---------hhHHHHHHHHhhccccee----ecc-------ccc--------CChHHHHHHHHH
Confidence 3332221 00 0111111111 0112111 123 221 123444555544
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
..+.+|.+ .++ +|+| +.||.++++++. +.+++|++.|||||++++|++++++|+
T Consensus 181 vr~~~g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~~~~iEeP~~~~d~~~~~~l~ 235 (370)
T 2chr_A 181 LSNSLGSK-AYLRVDVN-----------------------QAWDEQVASVYI-PELEALGVELIEQPVGRENTQALRRLS 235 (370)
T ss_dssp HHHHTTTT-SEEEEECT-----------------------TCCCTHHHHHHH-HHHHTTTCCEEECCSCSSCHHHHHHHH
T ss_pred HHHhcCCC-cEEEecCC-----------------------CCCCHHHHHHHH-HHHHhcCCceecCCCChhhhhhhhHHh
Confidence 44455755 566 9984 357889999875 457999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--H
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--F 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~ 427 (479)
+++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|++++++|+. ++..+ +
T Consensus 236 ~~~~ipIa~dE~~~-~~~~~~~~~~~~a~d~i------~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~-~~~i~~aa 307 (370)
T 2chr_A 236 DNNRVAIMADESLS-TLASAFDLARDRSVDVF------SLKLCNMGGVSATQKIAAVAEASGIASYGGTML-DSTIGTSV 307 (370)
T ss_dssp HHCSSEEEESSSCC-SHHHHHHHHTTTCCSEE------CCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCS-CCHHHHHH
T ss_pred hhccCCccCCccCC-CHHHHHHHHHcCCCcEE------EeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCc-ccHHHHHH
Confidence 999 9999999865 59999999999999999 999999999999999999999999998776654 55554 4
Q ss_pred HHHhHhhc
Q 011677 428 IADLSVGL 435 (479)
Q Consensus 428 ~~dlAv~~ 435 (479)
.+||+.++
T Consensus 308 ~~hlaa~~ 315 (370)
T 2chr_A 308 ALQLYSTV 315 (370)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHhC
Confidence 45555554
No 42
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=4.4e-41 Score=348.91 Aligned_cols=301 Identities=15% Similarity=0.153 Sum_probs=216.5
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
||+|++|+.+.+ ..+.+.|+|+|++|++ |+||+... + +...+...++ .++|.|+|
T Consensus 1 mMkIt~i~~~~~----~~~~~~V~v~td~G~~----------G~GE~~~~---------g-~~~~~~~~i~-~l~p~liG 55 (405)
T 3rr1_A 1 MVKITRLTTYRL----PPRWMFLKVETDEGVT----------GWGEPVIE---------G-RARTVEAAVH-ELSDYLIG 55 (405)
T ss_dssp CCCEEEEEEEEE----TTTEEEEEEEETTSCE----------EEECCCCT---------T-CHHHHHHHHH-HHGGGTTT
T ss_pred CCeEEEEEEEEE----CCCEEEEEEEECCCCE----------EEEeCCCC---------C-CHHHHHHHHH-HHHHHHCC
Confidence 799999999998 2457999999999994 99997642 1 1233344454 49999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+.+++|+.|.+... ...+.+..+|++|||+||||+.||.+|+|||++||| ..+.++| +|..+++.
T Consensus 56 ~dp~~~e~~~~~l~~~~~-~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~--~y~~~~~~----- 124 (405)
T 3rr1_A 56 QDPSRINDLWQTMYRAGF-YRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLGG---LVRDKMR--TYSWVGGD----- 124 (405)
T ss_dssp SCTTCHHHHHHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSCEE--EEEECCCS-----
T ss_pred CCcccHHHHHHHHHHhhc-ccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCc---cccCcee--eeEeCCCC-----
Confidence 999999999999986321 222345568999999999999999999999999998 3344544 46544211
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW 283 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i 283 (479)
+. +...+++.+...++|+++|. .|... ..+.....+.++.++.|+...+.+|.+ ..|
T Consensus 125 --~~---------e~~~~~a~~~~~~G~~~iKl-----~G~~~------~~~~~~~~~~~~d~e~v~avR~avG~d-~~L 181 (405)
T 3rr1_A 125 --RP---------ADVIAGMKALQAGGFDHFKL-----NGCEE------MGIIDTSRAVDAAVARVAEIRSAFGNT-VEF 181 (405)
T ss_dssp --SH---------HHHHHHHHHHHHTTCCEEEE-----ESCCS------SSCBCSHHHHHHHHHHHHHHHHTTGGG-SEE
T ss_pred --CH---------HHHHHHHHHHHHcCCCEEEE-----ecCCc------ccccccchhHHHHHHHHHHHHHHhCCC-ceE
Confidence 11 11233343444445555441 12110 011111112234444443333344644 345
Q ss_pred -eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCc
Q 011677 284 -SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDL 361 (479)
Q Consensus 284 -iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~ 361 (479)
+|+| +.||.++++++. +.++++++.|||||++++|++++++|++++ +||++||+
T Consensus 182 ~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~ 237 (405)
T 3rr1_A 182 GLDFH-----------------------GRVSAPMAKVLI-KELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGER 237 (405)
T ss_dssp EEECC-----------------------SCBCHHHHHHHH-HHHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTT
T ss_pred EEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCC
Confidence 8883 367889999875 558999999999999999999999999999 99999998
Q ss_pred cccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHhhcC
Q 011677 362 LMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADLSVGLA 436 (479)
Q Consensus 362 ~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv~~~ 436 (479)
.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+. ++.. ++.+|||.++.
T Consensus 238 i~-~~~~~~~~l~~~a~d~v------~~d~~~~GGitea~kia~lA~~~gi~v~~-h~~-~s~i~~aa~~hlaaa~p 305 (405)
T 3rr1_A 238 MF-SRFDFKRVLEAGGVSIL------QPDLSHAGGITECVKIAAMAEAYDVALAP-HCP-LGPIALAACLHVDFVSW 305 (405)
T ss_dssp CC-SHHHHHHHHHHCCCSEE------CCBTTTTTHHHHHHHHHHHHHTTTCEECC-BCC-SCHHHHHHHHHHHHHCT
T ss_pred cC-CHHHHHHHHHHhCCCeE------EEChhhcCCHHHHHHHHHHHHHcCCEEEe-CCC-CcHHHHHHHHHHHHhCC
Confidence 64 69999999999999999 99999999999999999999999999865 544 4544 45666666653
No 43
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=6.5e-41 Score=350.40 Aligned_cols=298 Identities=19% Similarity=0.206 Sum_probs=231.9
Q ss_pred CceeeEEEEEEE--------ecCCCC------ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHH
Q 011677 44 PSVITKIKARQI--------LDSRGI------PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRA 109 (479)
Q Consensus 44 ~~~I~~I~~~~i--------~ds~g~------~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~a 109 (479)
.|+|++|+++.+ .+|+|. ++++|+|+|++|++ |+||+.+ |++.+++
T Consensus 38 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~----------G~GE~~~----------g~~~~~~ 97 (428)
T 3bjs_A 38 DMKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGIT----------GYGEAHP----------GRSPGAI 97 (428)
T ss_dssp -CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCE----------EEEEECC----------TTCHHHH
T ss_pred CCEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCE----------EEEEecC----------CCCHHHH
Confidence 479999999988 355665 68999999999984 9999853 3456677
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccC-CC--CchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcc
Q 011677 110 VKNINERISEALVGMDPILQSQIDQAMIDLDKTE-KK--GELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLT 186 (479)
Q Consensus 110 v~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~-~~--~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~ 186 (479)
...|++.++|.|+|+||.+++++|+.|.+. +. +. +++..+|++|||+||||+.||..|+|||++||| . +
T Consensus 98 ~~~i~~~l~p~liG~d~~~~~~i~~~l~~~--~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg---~---~ 169 (428)
T 3bjs_A 98 TSLIHNTIAPMLIGMKATDCVGAWQRVHRM--QLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLGG---S---K 169 (428)
T ss_dssp HHHHHHTTTTTTTTSBTTCHHHHHHHHHHH--TTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---C---C
T ss_pred HHHHHHHHHHHhCCCCccCHHHHHHHHHHh--hhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCC---C---C
Confidence 778887899999999999999999999652 22 22 235679999999999999999999999999998 3 3
Q ss_pred cccceEEeecCCccCCCcccccceeeccCC-CCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHH
Q 011677 187 LPVPAFTVISGGKHAGNNLAIQDIMILPIG-ASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREG 265 (479)
Q Consensus 187 ~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~-~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~ 265 (479)
.++|+|++ |+.+.+ .. ....+++.+...++|+.+| .|.| . +.+.+.+.
T Consensus 170 ~~vp~~~s--g~~~~~------------~~~e~~~~~a~~~~~~Gf~~vK----ik~g-------~------~~~~d~e~ 218 (428)
T 3bjs_A 170 RRIPAYAG--GIALGY------------QPKESLAEEAQEYIARGYKALK----LRIG-------D------AARVDIER 218 (428)
T ss_dssp CCEEEEEE--SSCSCS------------CCHHHHHHHHHHHHHHTCSEEE----EECC-------S------CHHHHHHH
T ss_pred Cceeeeee--ccccCC------------ChHHHHHHHHHHHHHCCCCEEE----ECCC-------C------CHHHHHHH
Confidence 45666775 332211 11 1234555555566666655 3422 1 22344666
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+++ |.+ ..| +|+| +.||.+|+++++. .+++|+|.|||||++++|++
T Consensus 219 v~avR~av---G~d-~~l~vDan-----------------------~~~~~~eai~~~~-~L~~~~i~~iEqP~~~~d~~ 270 (428)
T 3bjs_A 219 VRHVRKVL---GDE-VDILTDAN-----------------------TAYTMADARRVLP-VLAEIQAGWLEEPFACNDFA 270 (428)
T ss_dssp HHHHHHHH---CTT-SEEEEECT-----------------------TCCCHHHHHHHHH-HHHHTTCSCEECCSCTTCHH
T ss_pred HHHHHHhc---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCEEECCCCccCHH
Confidence 66676666 644 456 8883 3568899998864 58999999999999999999
Q ss_pred HHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCC
Q 011677 345 HTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGE 422 (479)
Q Consensus 345 g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ge 422 (479)
++++|++++ +||++||+..+ +++++++++.+++|++ ++|++++||||++++++++|+++|+++|+ | +.|
T Consensus 271 ~~~~l~~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~v------~ik~~~~GGitea~~ia~~A~~~gi~~~~-~-~~e 341 (428)
T 3bjs_A 271 SYREVAKITPLVPIAAGENHYT-RFEFGQMLDAGAVQVW------QPDLSKCGGITEGIRIAAMASAYRIPINA-H-SSA 341 (428)
T ss_dssp HHHHHTTTCSSSCEEECTTCCS-HHHHHHHHTTCCEEEE------CCBTTTSSCHHHHHHHHHHHHHTTCCBCC-B-CCS
T ss_pred HHHHHHHhCCCCcEEcCCCcCC-HHHHHHHHHhCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCeEEe-c-CCC
Confidence 999999987 89999998754 9999999999999999 99999999999999999999999999765 5 678
Q ss_pred CchhHH--HHhHhhcCC
Q 011677 423 TEDSFI--ADLSVGLAS 437 (479)
Q Consensus 423 t~d~~~--~dlAv~~~~ 437 (479)
|..++. +|||+++..
T Consensus 342 s~i~~~a~~hlaaa~~~ 358 (428)
T 3bjs_A 342 TGLNHAATIHFLAATEN 358 (428)
T ss_dssp SHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHhCCC
Confidence 877654 788887754
No 44
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=7e-41 Score=347.69 Aligned_cols=320 Identities=13% Similarity=0.096 Sum_probs=223.3
Q ss_pred ceeeEEEEEEEecC----CCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHh
Q 011677 45 SVITKIKARQILDS----RGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEA 120 (479)
Q Consensus 45 ~~I~~I~~~~i~ds----~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~ 120 (479)
|+|++|+++.+--. .++..+.|+|+|++|++ |+||+... .+. ...+...+++.++|.
T Consensus 2 MkIt~i~~~~v~~plp~~~~~~~~~V~v~td~G~~----------G~GE~~~~------~~~---~~~~~~~i~~~l~p~ 62 (404)
T 4e5t_A 2 MRLSDIETFVVGNPPPRHGGRYFIFVKLVTACGIT----------GYGEIYNA------TFG---PDLVAKMAEDVFARQ 62 (404)
T ss_dssp CCEEEEEEEEEECCTTCTTCSEEEEEEEEETTSCE----------EEEEECCC------SSC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEeccCCcccCCCceEEEEEEECCCCE----------EEEeeccC------CCc---hHHHHHHHHHHHHHH
Confidence 79999999998532 14568999999999994 99998542 122 234455677788999
Q ss_pred hcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCc-
Q 011677 121 LVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGK- 199 (479)
Q Consensus 121 LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~- 199 (479)
|+|+||.+.+++|+.|++.......+.....|++|||+||||++||.+|+|||+|||| ..+.++|+ |+.+....
T Consensus 63 liG~dp~~~e~~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~~~ 137 (404)
T 4e5t_A 63 FAGEDPHHIEKLWHKTYGAGYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLGG---KVHERLRS--YTYLYPTDG 137 (404)
T ss_dssp TTTSCTTCHHHHHHHHHTTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTC---CCCSSEEE--EEECCC---
T ss_pred hcCCChhHHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcCC---CCcCeEEE--EEEeccccc
Confidence 9999999999999999753211111223467999999999999999999999999998 34455555 54321100
Q ss_pred c--CCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCC---CCchHHHHHHHHHHHH
Q 011677 200 H--AGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPN---ISSIREGLDLVKEAIN 274 (479)
Q Consensus 200 ~--~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~---~~~~~~~l~~v~~ai~ 274 (479)
| -+...+.. +...+...+++.+...++|+++| .|.|.... +..|. .+. .+.+.+.++.||+++
T Consensus 138 ~~~p~~d~~~~----~~~~e~~~~~a~~~~~~G~~~~K----lK~g~~~~--~~~g~-~~~~~~~~~d~~~v~avR~a~- 205 (404)
T 4e5t_A 138 DVYPDPDKPNV----YNDADMAAEAAAKAVDQGFTAVK----FDPAGAYT--IYDGH-QPSLEDLERSEAFCKQIRAAV- 205 (404)
T ss_dssp -------CCCT----TTCHHHHHHHHHHHHHHTCSEEE----ECCSCCCB--TTCSB-CCCHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccccc----CCCHHHHHHHHHHHHHcCCCEEe----eCCCCCCc--ccccc-cccHHHHHHHHHHHHHHHHHc-
Confidence 0 00000000 00111223344444455665555 45442111 11111 121 223455566666665
Q ss_pred hcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh
Q 011677 275 RTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC 353 (479)
Q Consensus 275 ~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~ 353 (479)
|.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|++++
T Consensus 206 --G~d-~~l~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~ 258 (404)
T 4e5t_A 206 --GTK-ADLLFGTH-----------------------GQFTVSGAKRLA-RRLEAYDPLWFEEPIPPEKPEDMAEVARYT 258 (404)
T ss_dssp --GGG-SEEEECCC-----------------------SCBCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHHHC
T ss_pred --CCC-CeEEEeCC-----------------------CCcCHHHHHHHH-HHHhhcCCcEEECCCCcccHHHHHHHHhhC
Confidence 533 345 8873 367889999875 568999999999999999999999999999
Q ss_pred -hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHH
Q 011677 354 -QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIAD 430 (479)
Q Consensus 354 -~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~d 430 (479)
+||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++ +.|+. ++.. +..+|
T Consensus 259 ~iPIa~dE~~~-~~~~~~~~i~~~a~d~v------~~d~~~~GGit~~~~ia~~A~~~gi~~-~~h~~-~s~i~~aa~~h 329 (404)
T 4e5t_A 259 SIPVATGERLC-TKYEFSRVLETGAASIL------QMNLGRVGGLLEAKKIAAMAECHSAQI-APHLY-CGPLVALANIQ 329 (404)
T ss_dssp SSCEEECTTCC-HHHHHHHHHHHTCCSEE------CCCTTTSSCHHHHHHHHHHHHHTTCEE-CCCCS-SCHHHHHHHHH
T ss_pred CCCEEeCCCcC-CHHHHHHHHHhCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCEE-eecCC-CcHHHHHHHHH
Confidence 9999999864 59999999999999999 999999999999999999999999997 55754 3444 45566
Q ss_pred hHhhcC
Q 011677 431 LSVGLA 436 (479)
Q Consensus 431 lAv~~~ 436 (479)
||.++.
T Consensus 330 laaa~p 335 (404)
T 4e5t_A 330 LATCSP 335 (404)
T ss_dssp HHHTCT
T ss_pred HHHhCC
Confidence 666653
No 45
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=5.3e-41 Score=346.55 Aligned_cols=304 Identities=17% Similarity=0.152 Sum_probs=226.5
Q ss_pred ceeeEEEEEEEe-----------cC-CC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHH
Q 011677 45 SVITKIKARQIL-----------DS-RG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNR 108 (479)
Q Consensus 45 ~~I~~I~~~~i~-----------ds-~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~ 108 (479)
|+|++|+.+.+. .+ ++ .+++.|+|+|++|++ |+||+.. ++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~-----------~~~-- 57 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQE----------GHSFTAP-----------EIV-- 57 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCE----------EEEEECG-----------GGG--
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCE----------EEEEecC-----------chH--
Confidence 689999988762 12 12 346899999999984 9999851 111
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCC-CchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccc
Q 011677 109 AVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKK-GELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTL 187 (479)
Q Consensus 109 av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~-~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~ 187 (479)
+...|++.++|.|+|+||.+++.+|+.|.+. +.+. +++..+|++|||+||||+.||..|+|||++||| . +.
T Consensus 58 ~~~~i~~~l~~~l~g~d~~~~~~~~~~l~~~--~~~~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~-~~-- 129 (382)
T 1rvk_A 58 RPHVIEKFVKKVLIGEDHRDRERLWQDLAHW--QRGSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIGG---Y-RD-- 129 (382)
T ss_dssp CHHHHHHTHHHHHTTSBTTCHHHHHHHHHHH--HTTTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHCC---S-CS--
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHh--hhcccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhCC---C-CC--
Confidence 4456777799999999999999999999642 1111 334578999999999999999999999999998 3 33
Q ss_pred ccceEEeec-CCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHH
Q 011677 188 PVPAFTVIS-GGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGL 266 (479)
Q Consensus 188 Pvp~~~~i~-GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l 266 (479)
++|+|+.+. |+.|.++..+. ....+++.+...++|+.+| .|.|... +++.++.+.+.+.+
T Consensus 130 ~vp~~~~~~~g~~~~~~~~~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~~~------~~~~~~~~~~~e~v 190 (382)
T 1rvk_A 130 KVLAYGSIMCGDELEGGLATP---------EDYGRFAETLVKRGYKGIK----LHTWMPP------VSWAPDVKMDLKAC 190 (382)
T ss_dssp EEEEEEEECCCCCCTTTTSSH---------HHHHHHHHHHHHHTCSEEE----EECCCTT------STTCCCHHHHHHHH
T ss_pred cceecEEeccCccccccCCCH---------HHHHHHHHHHHHCCCCEEE----EcCCcCc------cccccchHHHHHHH
Confidence 455565444 55443221111 1234455555556666665 4544211 11223334445566
Q ss_pred HHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHH
Q 011677 267 DLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEH 345 (479)
Q Consensus 267 ~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g 345 (479)
+.||+++ |.+ ..+ +|++ +.||.++++++. +.+++|++.|||||++++|+++
T Consensus 191 ~avr~a~---g~d-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iE~P~~~~~~~~ 242 (382)
T 1rvk_A 191 AAVREAV---GPD-IRLMIDAF-----------------------HWYSRTDALALG-RGLEKLGFDWIEEPMDEQSLSS 242 (382)
T ss_dssp HHHHHHH---CTT-SEEEEECC-----------------------TTCCHHHHHHHH-HHHHTTTCSEEECCSCTTCHHH
T ss_pred HHHHHHh---CCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEeCCCChhhHHH
Confidence 6666655 644 456 8883 357889999876 5689999999999999999999
Q ss_pred HHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCc
Q 011677 346 TKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETE 424 (479)
Q Consensus 346 ~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~ 424 (479)
+++|++++ +||++||+..+|+++++++++.+++|+| ++|++++||||++++++++|+++|++++++ +.|+.
T Consensus 243 ~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~--~~~~~ 314 (382)
T 1rvk_A 243 YKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDIL------RTGVNDVGGITPALKTMHLAEAFGMECEVH--GNTAM 314 (382)
T ss_dssp HHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCCEEEC--CCSHH
T ss_pred HHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEE------eeCchhcCCHHHHHHHHHHHHHcCCeEeec--CCCCH
Confidence 99999999 9999999876559999999999999999 999999999999999999999999998664 45554
Q ss_pred hhHHHHhHhhcCC
Q 011677 425 DSFIADLSVGLAS 437 (479)
Q Consensus 425 d~~~~dlAv~~~~ 437 (479)
.+|||+++..
T Consensus 315 ---~~~laaa~~~ 324 (382)
T 1rvk_A 315 ---NLHVVAATKN 324 (382)
T ss_dssp ---HHHHHHHCSS
T ss_pred ---HHHHHHhCCc
Confidence 8999998864
No 46
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=5.2e-41 Score=345.48 Aligned_cols=301 Identities=16% Similarity=0.108 Sum_probs=224.5
Q ss_pred CceeeEEEEEEEecC----C---CCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHH
Q 011677 44 PSVITKIKARQILDS----R---GIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINER 116 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds----~---g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~ 116 (479)
||+|++|+++.+-.. . +...+.|+|+|++|++ |+||.. ++...+...|++.
T Consensus 2 ~MkI~~i~~~~~~~P~~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~------------~~~~~~~~~i~~~ 59 (374)
T 3sjn_A 2 VLKITDIEVLHLRVPAMDADCEWGEDAVIVKVHTDKGIV----------GVGEAD------------SSPLVVQACIEAP 59 (374)
T ss_dssp CCBEEEEEEEEEESSCTTSCCCTTSEEEEEEEEETTSCE----------EEEEES------------SCHHHHHHHHHCC
T ss_pred CcEEEEEEEEEEeccCcCCcCcccceEEEEEEEECCCCE----------EEEcCC------------CChHHHHHHHHhh
Confidence 589999999998422 1 1223899999999994 999921 2345556667666
Q ss_pred --------HHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccc
Q 011677 117 --------ISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLP 188 (479)
Q Consensus 117 --------l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~P 188 (479)
++|.|+|+||.+.+++|+.|.+.......+++...|++|||+||||+.||.+|+|||++||| ..+.++|
T Consensus 60 ~~~~~~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg---~~r~~v~ 136 (374)
T 3sjn_A 60 QTNFYCNGLKRLLIGENALEIERLWNKMYWGSNYMGRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLGG---KYRDKIR 136 (374)
T ss_dssp CSBTTBCCHHHHHTTSBTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSEEE
T ss_pred hccchHhHHHHHHcCCCcccHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCC---CcCCcee
Confidence 99999999999999999999863221123456778999999999999999999999999998 3345555
Q ss_pred cceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHH
Q 011677 189 VPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDL 268 (479)
Q Consensus 189 vp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~ 268 (479)
+ |. |.... + ..+...+++.+...++|+.+| .|.|. .| .+.+.+.+.++.
T Consensus 137 ~--y~----~~~~~---~--------~~e~~~~~a~~~~~~Gf~~iK----lk~g~-------~g---~~~~~d~~~v~a 185 (374)
T 3sjn_A 137 C--YG----TFIPA---D--------KPEDNVAIVQGLKDQGFSSIK----FGGGV-------MG---DDPDTDYAIVKA 185 (374)
T ss_dssp E--EE----EECCC---S--------SGGGGHHHHHHHHTTTCSEEE----EECTT-------TT---SCHHHHHHHHHH
T ss_pred E--Ee----ccCCC---C--------CHHHHHHHHHHHHHcCCCEEE----eccCC-------CC---CCHHHHHHHHHH
Confidence 5 51 11110 0 012344555555556676665 45431 11 122345566666
Q ss_pred HHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCC-HHHHHHHHHHHHhhCCceeeecCCCccCHHHH
Q 011677 269 VKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKS-GEDMIEMYKELCADYPIVSIEDPFDKEDWEHT 346 (479)
Q Consensus 269 v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t-~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~ 346 (479)
||+++ |.+ ..+ +|+| +.|| .++++++. +.++++++.|||||++++|++++
T Consensus 186 vR~a~---g~~-~~l~vDan-----------------------~~~~d~~~A~~~~-~~l~~~~i~~iEqP~~~~~~~~~ 237 (374)
T 3sjn_A 186 VREAA---GPE-MEVQIDLA-----------------------SKWHTCGHSAMMA-KRLEEFNLNWIEEPVLADSLISY 237 (374)
T ss_dssp HHHHH---CSS-SEEEEECT-----------------------TTTCSHHHHHHHH-HHSGGGCCSEEECSSCTTCHHHH
T ss_pred HHHHh---CCC-CeEEEECC-----------------------CCCCCHHHHHHHH-HHhhhcCceEEECCCCcccHHHH
Confidence 66665 644 456 8883 3678 89999875 55899999999999999999999
Q ss_pred HHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch
Q 011677 347 KSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED 425 (479)
Q Consensus 347 ~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d 425 (479)
++|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+. ++..
T Consensus 238 ~~l~~~~~iPIa~dE~~~-~~~~~~~~l~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~-~~~i 308 (374)
T 3sjn_A 238 EKLSRQVSQKIAGGESLT-TRYEFQEFITKSNADIV------QPDITRCGGITEMKKIYDIAQMNGTQLIP-HGF-STGI 308 (374)
T ss_dssp HHHHHHCSSEEEECTTCC-HHHHHHHHHHHHCCSEE------CCBTTTSSHHHHHHHHHHHHHHHTCEECC-BCC-SCHH
T ss_pred HHHHhhCCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEe-cCC-CcHH
Confidence 9999999 9999999865 59999999999999999 99999999999999999999999999865 555 5544
Q ss_pred --hHHHHhHhhcCC
Q 011677 426 --SFIADLSVGLAS 437 (479)
Q Consensus 426 --~~~~dlAv~~~~ 437 (479)
++.+||+.++..
T Consensus 309 ~~aa~~hlaaa~~~ 322 (374)
T 3sjn_A 309 LLHASVHFLAACEQ 322 (374)
T ss_dssp HHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHhCCC
Confidence 456677766543
No 47
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.3e-41 Score=346.70 Aligned_cols=299 Identities=16% Similarity=0.131 Sum_probs=228.8
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ ++++.|+|+| +|++ |+||+.++.+ +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~----------G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLV----------GIGEGGSVGG---PTWGSESAETIKVI 66 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEE----------EEEEECCSTT---TTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEE----------EEEEeccCCC---CcccCCCHHHHHHH
Confidence 689999988772 2222 3578999999 8984 9999876421 46888889889889
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+||.+++++|+.|.+... + ..+|++|||+||||+.||.+|+|||++||| ..+.++|++
T Consensus 67 i~~~l~~~l~G~d~~~~~~~~~~l~~~~~----~--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~~v~~~-- 135 (370)
T 1nu5_A 67 IDNYLAPLLVGKDASNLSQARVLMDRAVT----G--NLSAKAAIDIALHDLKARALNLSIADLIGG---TMRTSIPIA-- 135 (370)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHHCS----S--CHHHHHHHHHHHHHHHHHHTTCBHHHHHTC---CSCSEEEBC--
T ss_pred HHHhhHHHHcCCCcccHHHHHHHHHHHhc----C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CcCCceEee--
Confidence 98889999999999999999999976431 1 257999999999999999999999999998 334566664
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHH-HHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGS-ETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~-e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++++ +. + ...+++.+... ++|+.+| .|.| . ++.+.+.+.++.||+
T Consensus 136 ~~~~~~-------~~-e--------~~~~~a~~~~~~~Gf~~iK----ik~g-------~-----~~~~~~~e~v~avr~ 183 (370)
T 1nu5_A 136 WTLASG-------DT-A--------RDIDSALEMIETRRHNRFK----VKLG-------A-----RTPAQDLEHIRSIVK 183 (370)
T ss_dssp EEECSS-------CH-H--------HHHHHHHHHHHTTSCSEEE----EECS-------S-----SCHHHHHHHHHHHHH
T ss_pred EEecCC-------CH-H--------HHHHHHHHHHHhCCccEEE----EecC-------C-----CChHHHHHHHHHHHH
Confidence 444332 11 1 12334444444 4555544 3422 1 122345667777777
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||++++|+++|++|+
T Consensus 184 a~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~~~~~~~l~ 235 (370)
T 1nu5_A 184 AV---GDR-ASVRVDVN-----------------------QGWDEQTASIWI-PRLEEAGVELVEQPVPRANFGALRRLT 235 (370)
T ss_dssp HH---GGG-CEEEEECT-----------------------TCCCHHHHHHHH-HHHHHHTCCEEECCSCTTCHHHHHHHH
T ss_pred hc---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCcceEeCCCCcccHHHHHHHH
Confidence 76 433 345 8883 357889999875 568999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH-
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI- 428 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~- 428 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++| +.|+..+..
T Consensus 236 ~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~aa 307 (370)
T 1nu5_A 236 EQNGVAILADESL-SSLSSAFELARDHAVDAF------SLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDSTVGTAA 307 (370)
T ss_dssp HHCSSEEEESTTC-CSHHHHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHH
T ss_pred HhCCCCEEeCCCC-CCHHHHHHHHHhCCCCEE------EEchhhcCCHHHHHHHHHHHHHcCCcEEecC-CcchHHHHHH
Confidence 999 999999975 669999999999999999 9999999999999999999999999987766 468776554
Q ss_pred -HHhHhhcC
Q 011677 429 -ADLSVGLA 436 (479)
Q Consensus 429 -~dlAv~~~ 436 (479)
+|||.++.
T Consensus 308 ~~hlaaa~~ 316 (370)
T 1nu5_A 308 ALHVYATLP 316 (370)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHhcCC
Confidence 55555543
No 48
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=1.3e-41 Score=349.68 Aligned_cols=299 Identities=20% Similarity=0.221 Sum_probs=231.3
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ ++++.|+|+|++|+ +|+||+.++ +.|.+++..++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~----------~G~GE~~~~-----~~~~~~~~~~~~~~ 65 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGI----------IGYGEGVAD-----DHVTGESWESTFHT 65 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCC-----HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHHH
Confidence 689999988772 2322 35799999999998 499998764 34677888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+|+.+++++|+.|.+... + ..+|++|||+||||+.||..|+|||++||| ..+.++|+ +
T Consensus 66 i~~~l~~~l~g~d~~~~~~~~~~l~~~~~----~--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~~v~~--~ 134 (369)
T 2p8b_A 66 LKHTLTPALIGQNPMNIEKIHDMMDNTIY----G--VPTAKAAIDIACFDIMGKKLNQPVYQLIGG---RYHEEFPV--T 134 (369)
T ss_dssp HHHTHHHHHTTCCTTCHHHHHHHHHHHCS----C--CHHHHHHHHHHHHHHHHHHTTSBGGGGTTC---CCCSCEEC--C
T ss_pred HHHHHHHHHcCCCcccHHHHHHHHHHHhc----C--ChHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCCCceee--e
Confidence 98889999999999999999999976431 1 257999999999999999999999999998 33445565 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
..++++ +.++ ..+++.+...++|+.+| .|.| . +.+.+.+.++.||++
T Consensus 135 ~~i~~~-------~~~~---------~~~~a~~~~~~Gf~~iK----ik~g-------~------~~~~~~e~v~avr~a 181 (369)
T 2p8b_A 135 HVLSIA-------DPEN---------MAEEAASMIQKGYQSFK----MKVG-------T------NVKEDVKRIEAVRER 181 (369)
T ss_dssp EEECSC-------CHHH---------HHHHHHHHHHTTCCEEE----EECC-------S------CHHHHHHHHHHHHHH
T ss_pred EEecCC-------ChHH---------HHHHHHHHHHcCcCEEE----EEeC-------C------CHHHHHHHHHHHHHH
Confidence 444432 1121 23444444445555554 3322 1 123345666666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHH-HHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMI-EMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i-~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
+ |.+ ..+ +|++ +.||.++++ ++. +.+++|++.|||||++++|+++|++|+
T Consensus 182 ~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~ 233 (369)
T 2p8b_A 182 V---GND-IAIRVDVN-----------------------QGWKNSANTLTAL-RSLGHLNIDWIEQPVIADDIDAMAHIR 233 (369)
T ss_dssp H---CTT-SEEEEECT-----------------------TTTBSHHHHHHHH-HTSTTSCCSCEECCBCTTCHHHHHHHH
T ss_pred h---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHHhCCCcEEECCCCcccHHHHHHHH
Confidence 6 644 455 8883 256778998 886 458999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA 429 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~ 429 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++|+ .|+..+..+
T Consensus 234 ~~~~iPI~~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~~a 305 (369)
T 2p8b_A 234 SKTDLPLMIDEGL-KSSREMRQIIKLEAADKV------NIKLMKCGGIYPAVKLAHQAEMAGIECQVGSM-VESSVASSA 305 (369)
T ss_dssp HTCCSCEEESTTC-CSHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCS-SCCHHHHHH
T ss_pred HhCCCCEEeCCCC-CCHHHHHHHHHhCCCCEE------EeecchhCCHHHHHHHHHHHHHcCCcEEecCC-CccHHHHHH
Confidence 999 999999986 569999999999999999 99999999999999999999999999988764 688887776
Q ss_pred HhHhhcCCC
Q 011677 430 DLSVGLASG 438 (479)
Q Consensus 430 dlAv~~~~~ 438 (479)
+++++...+
T Consensus 306 ~~~laa~~~ 314 (369)
T 2p8b_A 306 GFHVAFSKK 314 (369)
T ss_dssp HHHHHTTCT
T ss_pred HHHHHHcCC
Confidence 666665443
No 49
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=4.8e-41 Score=345.89 Aligned_cols=295 Identities=18% Similarity=0.172 Sum_probs=225.5
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+|++|+.+.+. ++.+ ...+.|+|+|++|++ |+||+... +.|.+++...+..
T Consensus 2 ~MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~----------G~Ge~~~~-----~~~~get~~~~~~ 66 (379)
T 3r0u_A 2 VSKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVK----------GYGVAPAT-----TAITGDTLQGMQY 66 (379)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEEECC-----HHHHCCCHHHHHH
T ss_pred CCEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCE----------EEEEEECC-----CCccCCCHHHHHH
Confidence 5899999988772 3333 357999999999984 99998764 2466777877778
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+||.+.+++|+.|.+... ...+|++|||+||||+.||..|+|||++||| . +.++|+
T Consensus 67 ~i~~~l~p~l~G~d~~~~~~~~~~~~~~~~------~~~~A~said~ALwDl~gK~~g~Pv~~LLGg---~-r~~v~~-- 134 (379)
T 3r0u_A 67 IIREIFAPVILGSDLSDYKQTLELAFKKVM------FNSAAKMAIDLAYHDLLAKEQDISVAKLLGA---K-ANSIVT-- 134 (379)
T ss_dssp HHHHTTHHHHTTCBGGGHHHHHHHHHTTCS------SCHHHHHHHHHHHHHHHHHHTTSBHHHHTTC---C-CCEEEB--
T ss_pred HHHHHhHHHhcCCCcccHHHHHHHHHHhcc------cchHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCeEEE--
Confidence 888889999999999999999998875311 1257999999999999999999999999998 3 455555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
|..++.+ +. +...+++.+...++|+.+| .|.| .+.+.+.++++.||+
T Consensus 135 y~t~g~~-------~~---------e~~~~~a~~~~~~Gf~~~K----lK~g-------------~~~~~d~~~v~avR~ 181 (379)
T 3r0u_A 135 DVSISCG-------NV---------AETIQNIQNGVEANFTAIK----VKTG-------------ADFNRDIQLLKALDN 181 (379)
T ss_dssp CEEECCC-------CH---------HHHHHHHHHHHHTTCCEEE----EECS-------------SCHHHHHHHHHHHHH
T ss_pred EEEecCC-------CH---------HHHHHHHHHHHHcCCCEEe----eecC-------------CCHHHHHHHHHHHHH
Confidence 4433211 11 1123344444444555554 4433 122334555555555
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhh--CCceeeecCCCccCHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCAD--YPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~--~~i~~iEdP~~~~D~~g~~~ 348 (479)
++ |.+ ..+ +|+| +.||.++++++. +.+++ +++.|||||++++|++++++
T Consensus 182 a~---g~~-~~L~vDaN-----------------------~~w~~~~A~~~~-~~l~~~~~~l~~iEeP~~~~d~~~~~~ 233 (379)
T 3r0u_A 182 EF---SKN-IKFRFDAN-----------------------QGWNLAQTKQFI-EEINKYSLNVEIIEQPVKYYDIKAMAE 233 (379)
T ss_dssp HC---CTT-SEEEEECT-----------------------TCCCHHHHHHHH-HHHHTSCCCEEEEECCSCTTCHHHHHH
T ss_pred hc---CCC-CeEEEeCC-----------------------CCcCHHHHHHHH-HHHhhcCCCcEEEECCCCcccHHHHHH
Confidence 44 644 456 8983 367889999875 55899 88999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED-- 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d-- 425 (479)
|++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++ ++.|+..
T Consensus 234 l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v------~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~-~~~es~i~~ 305 (379)
T 3r0u_A 234 ITKFSNIPVVADESV-FDAKDAERVIDEQACNMI------NIKLAKTGGILEAQKIKKLADSAGISCMVG-CMMESPAGI 305 (379)
T ss_dssp HHHHCSSCEEESTTC-SSHHHHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEEC-CCSCCHHHH
T ss_pred HHhcCCCCEEeCCcc-CCHHHHHHHHHcCCCCEE------EECccccCCHHHHHHHHHHHHHcCCEEEEe-CCCccHHHH
Confidence 99999 999999976 569999999999999999 999999999999999999999999998764 4456644
Q ss_pred hHHHHhHhh
Q 011677 426 SFIADLSVG 434 (479)
Q Consensus 426 ~~~~dlAv~ 434 (479)
++.+|||++
T Consensus 306 aa~~hlaaa 314 (379)
T 3r0u_A 306 LATASFALA 314 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 567777777
No 50
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=6.4e-42 Score=354.59 Aligned_cols=293 Identities=17% Similarity=0.166 Sum_probs=226.4
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.+ +++++|+|+|++|++ |+||+..+.. +.|.++++.+++.
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~----------G~GE~~~~~~---~~~~~e~~~~~~~ 85 (393)
T 1wuf_A 19 HMYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIH----------GYGELEAFPL---PDYTEETLSSAIL 85 (393)
T ss_dssp CEECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCE----------EEEEECCCSS---TTSSSCCHHHHHH
T ss_pred cCEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCE----------EEEEeecCCC---CcccCCCHHHHHH
Confidence 7899999998772 2332 357999999999984 9999876532 4688889988888
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+|+.+++.+|+.|..+.+ +.+|++|||+||||+.||..|+|||++||| . +.++|++.
T Consensus 86 ~i~~~l~p~l~G~d~~~~~~l~~~l~~~~g-------~~~a~~aid~AlwDl~gk~~g~Pl~~lLGg---~-~~~v~~~~ 154 (393)
T 1wuf_A 86 IIKEQLLPLLAQRKIRKPEEIQELFSWIQG-------NEMAKAAVELAVWDAFAKMEKRSLAKMIGA---T-KESIKVGV 154 (393)
T ss_dssp HHHHTTHHHHHHCEESSTTHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHTTC---C-CSEEEBCE
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHHHccC-------chHHHHHHHHHHHHHHHHHhCCcHHHHhCC---C-CCcceeeE
Confidence 898889999999999999999998865432 257999999999999999999999999998 2 35666654
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
.++.+ . +.++ ..+++.+...++|+.+| .|. | + +.+.+.++.||+
T Consensus 155 --~~g~~----~--~~e~---------~~~~a~~~~~~G~~~~K----iKv-------g------~--~~d~~~v~avr~ 198 (393)
T 1wuf_A 155 --SIGLQ----Q--NVET---------LLQLVNQYVDQGYERVK----LKI-------A------P--NKDIQFVEAVRK 198 (393)
T ss_dssp --EECCC----S--CHHH---------HHHHHHHHHHHTCCEEE----EEC-------B------T--TBSHHHHHHHHT
T ss_pred --EeCCC----C--CHHH---------HHHHHHHHHHHhhHhhe----ecc-------C------h--HHHHHHHHHHHH
Confidence 32211 0 1121 24455555556666665 342 2 1 234566666655
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ .+ .++ +|+| +.||.+++ +++ +.+++|+|.|||||++++|+++|++|+
T Consensus 199 a~----~~-~~l~vDaN-----------------------~~~~~~~a-~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~ 248 (393)
T 1wuf_A 199 SF----PK-LSLMADAN-----------------------SAYNREDF-LLL-KELDQYDLEMIEQPFGTKDFVDHAWLQ 248 (393)
T ss_dssp TC----TT-SEEEEECT-----------------------TCCCGGGH-HHH-HTTGGGTCSEEECCSCSSCSHHHHHHH
T ss_pred Hc----CC-CEEEEECC-----------------------CCCCHHHH-HHH-HHHHhCCCeEEECCCCCcCHHHHHHHH
Confidence 54 12 356 9984 24566777 665 668999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA 429 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~ 429 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++|++++. |+..+..+
T Consensus 249 ~~~~ipIa~dE~~-~~~~~~~~~i~~~a~d~v------~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~-es~i~~aa 320 (393)
T 1wuf_A 249 KQLKTRICLDENI-RSVKDVEQAHSIGSCRAI------NLKLARVGGMSSALKIAEYCALNEILVWCGGML-EAGVGRAH 320 (393)
T ss_dssp TTCSSEEEECTTC-CSHHHHHHHHHHTCCSEE------EECTGGGTSHHHHHHHHHHHHHTTCEEEECCCC-CCHHHHHH
T ss_pred HhCCCCEEECCCc-CCHHHHHHHHHhCCCCEE------EeChhhhCCHHHHHHHHHHHHHcCCeEEecCCc-ccHHHHHH
Confidence 999 999999975 569999999999999999 999999999999999999999999999887654 67665555
Q ss_pred HhHhh
Q 011677 430 DLSVG 434 (479)
Q Consensus 430 dlAv~ 434 (479)
.++++
T Consensus 321 ~~hla 325 (393)
T 1wuf_A 321 NIALA 325 (393)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 51
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=3e-41 Score=348.43 Aligned_cols=296 Identities=14% Similarity=0.095 Sum_probs=222.7
Q ss_pred CceeeEEEEEEEe--------cCCC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
||+|++|+.+.+. ++.| ...+.|+|+|++|++ |+||+.++. .|. ++...+.
T Consensus 7 ~mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~-----~~~-e~~~~~~ 70 (385)
T 3i6e_A 7 EQKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAE----------GFGEASPWA-----VFT-GTPEASY 70 (385)
T ss_dssp CSBEEEEEEEEEECCC--------------CEEEEEEEEETTSCE----------EEEEECCCT-----TTT-CCHHHHH
T ss_pred hcEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCE----------EEEeeccCC-----CcC-CCHHHHH
Confidence 7899999999883 2222 246999999999994 999987642 233 5677777
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..|++.++|.|+|+|+.+.+++|+.|.+... + ..+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 71 ~~i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----~--~~~A~said~ALwDl~gk~~g~Pl~~LLGg---~~r~~v~~- 140 (385)
T 3i6e_A 71 AALDRYLRPLVIGRRVGDRVAIMDEAARAVA----H--CTEAKAALDSALLDLAGRISNLPVWALLGG---KCRDTIPL- 140 (385)
T ss_dssp HHHHHTTHHHHTTCBGGGHHHHHHHHHHHSS----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEEB-
T ss_pred HHHHHHHHHHHCCCCccCHHHHHHHHHHHhc----C--CHHHHHHHHHHHHHHHHHHcCCcHHHHhCc---ccCCceEE-
Confidence 8888779999999999999999999976321 1 157999999999999999999999999998 33455555
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+..++.+ +. ....+++.+...++|+.+| .|.|. .+.+.+.+.++.||
T Consensus 141 -~~t~~~~-------~~---------~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~avR 187 (385)
T 3i6e_A 141 -SCSIANP-------DF---------DADIALMERLRADGVGLIK----LKTGF------------RDHAFDIMRLELIA 187 (385)
T ss_dssp -EEEECCS-------SH---------HHHHHHHHHHHHHTCCEEE----EECSS------------SCHHHHHHHHHHHH
T ss_pred -EEEcCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EecCC------------CCHHHHHHHHHHHH
Confidence 5433221 11 1223445455555666555 45331 11233455555555
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ .+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|
T Consensus 188 ~a~----~~-~~l~vDan-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~d~~~~~~l 238 (385)
T 3i6e_A 188 RDF----PE-FRVRVDYN-----------------------QGLEIDEAVPRV-LDVAQFQPDFIEQPVRAHHFELMARL 238 (385)
T ss_dssp HHC----TT-SEEEEECT-----------------------TCCCGGGHHHHH-HHHHTTCCSCEECCSCTTCHHHHHHH
T ss_pred HhC----CC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHHH
Confidence 554 22 345 8983 356778888775 45799999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS-- 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~-- 426 (479)
++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+..+
T Consensus 239 ~~~~~iPIa~dE~~-~~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~es~i~~a 310 (385)
T 3i6e_A 239 RGLTDVPLLADESV-YGPEDMVRAAHEGICDGV------SIKIMKSGGLTRAQTVARIAAAHGLMAYGGDM-FEAGLAHL 310 (385)
T ss_dssp HTTCSSCEEESTTC-CSHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-SCCHHHHH
T ss_pred HHhCCCCEEEeCCc-CCHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCEEEeCCC-CccHHHHH
Confidence 9999 999999976 459999999999999999 99999999999999999999999999977554 466554
Q ss_pred HHHHhHhhc
Q 011677 427 FIADLSVGL 435 (479)
Q Consensus 427 ~~~dlAv~~ 435 (479)
+.+||+.++
T Consensus 311 a~~hlaaa~ 319 (385)
T 3i6e_A 311 AGTHMIAAT 319 (385)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 455666554
No 52
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=4.5e-42 Score=353.90 Aligned_cols=306 Identities=15% Similarity=0.083 Sum_probs=225.5
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+| +|+.+.+. .+.+ +++++|+| |++|++ |+||+.++ +.|.++++..+..
T Consensus 2 m~~m-~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v-td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~ 64 (377)
T 2pge_A 2 LSGM-ELSYRRSDLIFKRPAGTSRGVLTSKPTWFVRL-DIDGHG----------GQGEVSLI-----PGLSLDPEEQIGR 64 (377)
T ss_dssp -CCC-EEEEEECCEEBCC-------CCCEECEEEEEE-EETTEE----------EEEEEECC-----TTTCSSCHHHHHH
T ss_pred Ccce-EEEEEEEeecccCcceeccEEEeecceEEEEE-EcCCCE----------EEEEeccC-----CCCCcCCHHHHHH
Confidence 5566 67776662 2222 56899999 999984 99999875 3577788888888
Q ss_pred HHHHHHHHhhcCCCC------------CCHHHHHHHHHhhhccC-----CCCchhhhHHHHHHHHHHHHHHHhcCchhHH
Q 011677 112 NINERISEALVGMDP------------ILQSQIDQAMIDLDKTE-----KKGELGANAILAVSIAACKAGAAEKEVPLYK 174 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~------------~~~~~id~~l~~~~~~~-----~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~ 174 (479)
.++ .+.|.|+|+|| .+.+.+|+.|.+++++. ..++...+|++|||+||||+.||..|+|||+
T Consensus 65 ~l~-~~~~~l~g~d~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~ 143 (377)
T 2pge_A 65 ELD-LLARRLRAEEPIRLRQFLAERGGADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFAS 143 (377)
T ss_dssp HHH-HHHHHHHHSCCHHHHHHHHHTSSCTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCS
T ss_pred HHH-HHHHHHhCCCccchhhhhhccccccHHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 887 68999999988 44467787776543221 1123457899999999999999999999999
Q ss_pred HHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCC
Q 011677 175 HIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGG 254 (479)
Q Consensus 175 lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~ 254 (479)
+||| . +.++|++ .+++++ +. |. ..+++.+...++|+.+| .|.| .
T Consensus 144 llGg---~-~~~vp~~--~~i~~~-------~~-e~--------~~~~a~~~~~~G~~~~K----~Kvg-------~--- 187 (377)
T 2pge_A 144 DFTR---G-EKRIPVN--GLIWMG-------EA-AF--------MQEQIEAKLAEGYGCLK----LKIG-------A--- 187 (377)
T ss_dssp TTTT---T-SCCEEBC--EEECCC-------CH-HH--------HHHHHHHHHHTTCSEEE----EEC------------
T ss_pred HhCC---C-CCeEEEe--EEecCC-------CH-HH--------HHHHHHHHHHHhhhhhe----eecC-------C---
Confidence 9998 3 3455654 444432 11 21 23455555556676665 3433 1
Q ss_pred CCCCCCchHHHHHHHHHHHHhcC-CCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCce
Q 011677 255 LAPNISSIREGLDLVKEAINRTG-IPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIV 332 (479)
Q Consensus 255 ~~~~~~~~~~~l~~v~~ai~~~g-~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~ 332 (479)
.++++.++.|+++.+.+| .+ ..+ +|+|. .||.+++++++ +.+++|+|.
T Consensus 188 -----~~~~~d~~~v~avr~~~g~~~-~~l~vDaN~-----------------------~~~~~~a~~~~-~~l~~~~i~ 237 (377)
T 2pge_A 188 -----IDFDKECALLAGIRESFSPQQ-LEIRVDANG-----------------------AFSPANAPQRL-KRLSQFHLH 237 (377)
T ss_dssp ------CHHHHHHHHHHHHHHSCTTT-CEEEEECTT-----------------------BBCTTTHHHHH-HHHHTTCCS
T ss_pred -----CChHHHHHHHHHHHHHcCCCC-ceEEEECCC-----------------------CCCHHHHHHHH-HHHhcCCCc
Confidence 123556666666555667 55 466 99842 45677888876 568999999
Q ss_pred eeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHH-HHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhC
Q 011677 333 SIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKR-IERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDV 410 (479)
Q Consensus 333 ~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~-~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~ 410 (479)
|||||++++|+++|++|++++ +||++||+..+..+. ++++++.+++|++ +||++++||||++++++++|+++
T Consensus 238 ~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i------~ik~~~~GGit~~~~i~~~A~~~ 311 (377)
T 2pge_A 238 SIEQPIRQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYI------ILKPSLLGGFHYAGQWIELARER 311 (377)
T ss_dssp EEECCBCSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEE------EECHHHHTSHHHHHHHHHHHHHT
T ss_pred EEEccCCcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEE------EECchhcCCHHHHHHHHHHHHHC
Confidence 999999999999999999999 999999988764333 7899999999999 99999999999999999999999
Q ss_pred CCeEEEecCCCCCchhHHHHhHhhcCCCCc
Q 011677 411 PWGVVISHRSGETEDSFIADLSVGLASGQI 440 (479)
Q Consensus 411 g~~~~v~h~~get~d~~~~dlAv~~~~~~i 440 (479)
|+++|++|+ .||..+..+.++++...+..
T Consensus 312 g~~~~~~~~-~es~i~~~a~~hlaa~~~~~ 340 (377)
T 2pge_A 312 GIGFWITSA-LESNLGLAAIAQWTALYQPT 340 (377)
T ss_dssp TCEEEEBCC-SCCHHHHHHHHHHHHTTCCS
T ss_pred CCeEEecCC-cccHHHHHHHHHHHHCCCCC
Confidence 999988876 68888766655555544443
No 53
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=6.5e-41 Score=344.56 Aligned_cols=301 Identities=17% Similarity=0.112 Sum_probs=218.2
Q ss_pred ceeeEEEEEEEec---------CCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 45 SVITKIKARQILD---------SRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 45 ~~I~~I~~~~i~d---------s~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
|+|++|+++.+-- +.+ .+.+.|+|+|++|++ |+||+.... .+. +...+..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~----------G~GE~~~~~-----~~~--~~~~~~~ 63 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIE----------GYGFTGTHA-----HLP--SDRLITS 63 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCE----------EEEEEEECC-----CHH--HHHHHHH
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCE----------EEEeccCcc-----ccC--cHHHHHH
Confidence 6899999988731 111 246899999999994 999986531 001 1234455
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCC--chhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKG--ELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~--~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
.|++.++|.|+|+||.+.+++|+.|.+.......+ ++..+|++|||+||||+.||.+|+|||++||| ..+.+ +
T Consensus 64 ~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llGg---~~~~~--v 138 (372)
T 3tj4_A 64 CISDCYAPLLLGEDASDHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGG---ARTAG--V 138 (372)
T ss_dssp HHHHTTHHHHTTSBTTCHHHHHHHHHTCHHHHTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSC--E
T ss_pred HHHHHHHHHhCCCChhhHHHHHHHHHHhhHhhcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcCC---CCCCC--e
Confidence 67778999999999999999999998632111112 45578999999999999999999999999998 33333 4
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDL 268 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~ 268 (479)
|+|+.++ |... .+. +...+++.+...+ +|+.+| .|.|. ++.+.+.+.++.
T Consensus 139 ~~y~s~~-~~~~---~~~---------~~~~~~a~~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~a 189 (372)
T 3tj4_A 139 EAYNTDI-GWLS---FTL---------EDLLAGSARAVEEDGFTRLK----IKVGH------------DDPNIDIARLTA 189 (372)
T ss_dssp EEEECTT-CCTT---SCH---------HHHHHHHHHHHHTTCCCEEE----EECCC------------SSHHHHHHHHHH
T ss_pred EEEEecC-CccC---CCH---------HHHHHHHHHHHHccCCCEEE----EcCCC------------CCHHHHHHHHHH
Confidence 5565432 2110 011 1223344444444 565554 45331 122334455555
Q ss_pred HHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHH
Q 011677 269 VKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTK 347 (479)
Q Consensus 269 v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~ 347 (479)
||+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|+++++
T Consensus 190 vR~~~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~ 241 (372)
T 3tj4_A 190 VRERV---DSA-VRIAIDGN-----------------------GKWDLPTCQRFC-AAAKDLDIYWFEEPLWYDDVTSHA 241 (372)
T ss_dssp HHHHS---CTT-CEEEEECT-----------------------TCCCHHHHHHHH-HHTTTSCEEEEESCSCTTCHHHHH
T ss_pred HHHHc---CCC-CcEEeeCC-----------------------CCCCHHHHHHHH-HHHhhcCCCEEECCCCchhHHHHH
Confidence 55444 644 456 8883 367889999875 458999999999999999999999
Q ss_pred HHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC--CCCCc
Q 011677 348 SVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR--SGETE 424 (479)
Q Consensus 348 ~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~--~get~ 424 (479)
+|++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+ ..+
T Consensus 242 ~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~g~~~~-- 311 (372)
T 3tj4_A 242 RLARNTSIPIALGEQL-YTVDAFRSFIDAGAVAYV------QPDVTRLGGITEYIQVADLALAHRLPVVP-HAGEMSQ-- 311 (372)
T ss_dssp HHHHHCSSCEEECTTC-CSHHHHHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHHTTCCBCC-CCTTTTT--
T ss_pred HHHhhcCCCEEeCCCc-cCHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEe-cCchHHH--
Confidence 999999 999999976 569999999999999999 99999999999999999999999999755 54 333
Q ss_pred hhHHHHhHhhcC
Q 011677 425 DSFIADLSVGLA 436 (479)
Q Consensus 425 d~~~~dlAv~~~ 436 (479)
..+|++.++.
T Consensus 312 --~~~~l~aa~~ 321 (372)
T 3tj4_A 312 --VHVHLSYWHP 321 (372)
T ss_dssp --THHHHHHHCT
T ss_pred --HHHHHhhhCC
Confidence 3578888764
No 54
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=7.4e-41 Score=347.14 Aligned_cols=298 Identities=19% Similarity=0.164 Sum_probs=228.9
Q ss_pred ceeeEEEEEEEec--------CCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQILD--------SRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~d--------s~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+.- +.+ +++++|+|+|++|+ +|+||+.++++ .|.+++..++...
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~~----~~~~~~~~~~~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGL----------VGIADAGDTSS----WYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSC----------EEEEECCCCCT----TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCC----------EEEEEEecccC----ccCCCCHHHHHHH
Confidence 7999999998832 222 45899999999998 49999987642 4678888888888
Q ss_pred HHHHHHH-hhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 113 INERISE-ALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 113 i~~~l~p-~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
+++.++| .|+|+||.+++.+|+.|.. +. ++ ..+|++|||+||||+.||..|+|||++||| ..+. ++|+
T Consensus 69 i~~~l~~~~l~G~d~~~~~~l~~~l~~---~~-~~--~~~a~~aid~AlwDl~ak~~g~Pl~~llGg---~~~~--~vp~ 137 (397)
T 2qde_A 69 ICDFFAPKVLLGEDPTKIEKIVGRMDI---LT-RD--NNQAKATVDFALHDLVGKRFGVPVYQLLGG---KTIE--RIPL 137 (397)
T ss_dssp HHHTHHHHTTTTCCTTCHHHHHHHHHH---HC-SS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCS--SEEB
T ss_pred HHHhhhhHhhcCCChHhHHHHHHHhhh---hh-cc--chhHHHHHHHHHHHHHHHHhCCcHHHHhCC---CCCC--Ccce
Confidence 9888999 9999999999999998832 11 12 368999999999999999999999999998 3233 4555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
|.+++.+ +.+ ...+++.+...++|+.+| .|.| . +.+.+.+.++.||+
T Consensus 138 ~~~~g~~-------~~e---------~~~~~a~~~~~~Gf~~vK----ik~g-------~------~~~~~~e~v~avR~ 184 (397)
T 2qde_A 138 GLVLGAG-------EPE---------AVAEEALAVLREGFHFVK----LKAG-------G------PLKADIAMVAEVRR 184 (397)
T ss_dssp CEECCCS-------CHH---------HHHHHHHHHHHHTCSCEE----EECC-------S------CHHHHHHHHHHHHH
T ss_pred EEECCCC-------CHH---------HHHHHHHHHHHhhhhhee----eccc-------C------CHHHHHHHHHHHHH
Confidence 6554211 111 123455555555665555 3422 1 22334566666766
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..| +|+| +.||.++++++. +.+++|++.|||||++++|+++|++|+
T Consensus 185 a~---g~d-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~~~~~~~l~ 236 (397)
T 2qde_A 185 AV---GDD-VDLFIDIN-----------------------GAWTYDQALTTI-RALEKYNLSKIEQPLPAWDLDGMARLR 236 (397)
T ss_dssp HH---CTT-SCEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSCEECCSCTTCHHHHHHHH
T ss_pred hh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhCCCCEEECCCChhhHHHHHHHH
Confidence 66 644 456 8883 357889999875 568999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--H
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--F 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~ 427 (479)
+++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++++++ .|+..+ +
T Consensus 237 ~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~ig~aa 308 (397)
T 2qde_A 237 GKVATPIYADESAQ-ELHDLLAIINKGAADGL------MIKTQKAGGLLKAQRWLTLARLANLPVICGCM-VGSGLEASP 308 (397)
T ss_dssp TTCSSCEEESTTCC-SHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCCEEECCC-SCCHHHHHH
T ss_pred hhCCCCEEEeCCcC-CHHHHHHHHHcCCCCEE------EEeccccCCHHHHHHHHHHHHHcCCeEEEecC-cccHHHHHH
Confidence 999 9999999875 59999999999999999 99999999999999999999999999877554 466554 5
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+|||.++.
T Consensus 309 ~~hlaa~~~ 317 (397)
T 2qde_A 309 AAHLLAAND 317 (397)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCC
Confidence 566666553
No 55
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=2.8e-41 Score=344.00 Aligned_cols=293 Identities=19% Similarity=0.176 Sum_probs=224.9
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+|++|+.+.+. .+.+ +++++|+|+|++|+ +|+||+.++ +.|.++++.+++.
T Consensus 1 MmkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~-----~~~~~e~~~~~~~ 65 (345)
T 2zad_A 1 MSRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGV----------KGYGEASPS-----FRVNGERVEALLA 65 (345)
T ss_dssp -CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSC----------EEEEEECCC-----HHHHCCCHHHHHH
T ss_pred CCEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCC----------EEEEEecCC-----CCcCCCCHHHHHH
Confidence 7899999998883 2222 45799999999998 499998764 3466788888888
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+++ ++|.|+|+||.+++.+|+.| +.. +...+|++|||+||||+.||..|+|||++||| . +.++|++
T Consensus 66 ~i~~-l~~~l~g~d~~~~~~~~~~l-~~~------~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~v~~~- 132 (345)
T 2zad_A 66 IENA-VREMITGIDVRNYARIFEIT-DRL------FGFPSLKAAVQFATLDALSQELGTQVCYLLGG---K-RDEIETD- 132 (345)
T ss_dssp THHH-HHHHHTTCBGGGHHHHHHHH-TTC------TTSHHHHHHHHHHHHHHHHHHHTSCHHHHTTC---C-CSEEEBC-
T ss_pred HHHH-HHHHhCCCChhhHHHHHHHH-HHh------ccchHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceeee-
Confidence 8887 99999999999999999988 321 12468999999999999999999999999998 2 3566664
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++++ +.++ ..+++.+...++|+.+| .|.| . +.++.++.| +
T Consensus 133 -~~~~~~-------~~~~---------~~~~a~~~~~~Gf~~iK----ik~g-------~---------~~~~d~~~v-~ 174 (345)
T 2zad_A 133 -KTVGID-------TVEN---------RVKEAKKIFEEGFRVIK----IKVG-------E---------NLKEDIEAV-E 174 (345)
T ss_dssp -EEECSC-------CHHH---------HHHHHHHHHHTTCSEEE----EECC-------S---------CHHHHHHHH-H
T ss_pred -EEecCC-------CHHH---------HHHHHHHHHHcCcCEEE----Eeec-------C---------CHHHHHHHH-H
Confidence 444332 1121 23455555555565555 3422 1 234445555 3
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCce--eeecCCCccCHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIV--SIEDPFDKEDWEHTKS 348 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~--~iEdP~~~~D~~g~~~ 348 (479)
+++++|.+ ..+ +|+| +.||.++++++. +.+++|++. |||||++++|+++|++
T Consensus 175 avr~~g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~~~iE~P~~~~~~~~~~~ 229 (345)
T 2zad_A 175 EIAKVTRG-AKYIVDAN-----------------------MGYTQKEAVEFA-RAVYQKGIDIAVYEQPVRREDIEGLKF 229 (345)
T ss_dssp HHHHHSTT-CEEEEECT-----------------------TCSCHHHHHHHH-HHHHHTTCCCSEEECCSCTTCHHHHHH
T ss_pred HHHhhCCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCeeeeeCCCCcccHHHHHH
Confidence 33333644 456 8883 357889999876 458999999 9999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh-
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS- 426 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~- 426 (479)
|++++ +||++||+.. ++++++++++.+++|++ ++|+++ ||+|++++++++|+++|++++++|+ .||..+
T Consensus 230 l~~~~~ipia~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~ 300 (345)
T 2zad_A 230 VRFHSPFPVAADESAR-TKFDVMRLVKEEAVDYV------NIKLMK-SGISDALAIVEIAESSGLKLMIGCM-GESSLGI 300 (345)
T ss_dssp HHHHSSSCEEESTTCC-SHHHHHHHHHHTCCSEE------EECHHH-HHHHHHHHHHHHHHTTTCEEEECCS-SCCHHHH
T ss_pred HHHhCCCCEEEeCCcC-CHHHHHHHHHhCCCCEE------EEeccc-ccHHHHHHHHHHHHHcCCeEEEecC-cccHHHH
Confidence 99999 9999999865 69999999999999999 999999 9999999999999999999988765 677664
Q ss_pred -HHHHhHhhcC
Q 011677 427 -FIADLSVGLA 436 (479)
Q Consensus 427 -~~~dlAv~~~ 436 (479)
+.+|||.++.
T Consensus 301 aa~~hlaa~~~ 311 (345)
T 2zad_A 301 NQSVHFALGTG 311 (345)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHcCC
Confidence 5667776664
No 56
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=1.3e-40 Score=343.58 Aligned_cols=300 Identities=14% Similarity=0.138 Sum_probs=216.6
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|+.... .+.+.|+|+|++|++ |+||+.. |.. ..+...+.+.++|.|+|
T Consensus 22 ~mkIt~v~~~~~-----~~~~~V~v~Td~G~~----------G~GE~~~--------~~~---~~~~~~i~~~l~p~LiG 75 (388)
T 3tcs_A 22 SMKLKAIETFTN-----DAVGFVRVTTQDGAQ----------GWGQVST--------YHA---DITCTVLHRQVAPWMLG 75 (388)
T ss_dssp -CBEEEEEEEEC-----SSCEEEEEEETTSCE----------EEEECCS--------SSH---HHHHHHHHHHTHHHHTT
T ss_pred ccEEEEEEEEEe-----CCeEEEEEEECCCCE----------EEEeccC--------Ccc---HHHHHHHHHHHHHHhCC
Confidence 689999998753 246899999999994 9999753 332 23445577889999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+.+++|+.|.+.. ....+....+|++|||+||||+.||.+|+|||++||| . +.+ +|+|+...+.
T Consensus 76 ~d~~~~e~l~~~~~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGg---~-~~~--v~~y~s~~~~----- 143 (388)
T 3tcs_A 76 QDITDLDDLLDIVTERE-HKFPGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLGG---T-PGL--IRAYASSMKR----- 143 (388)
T ss_dssp SBCTTHHHHHHHHHHHT-TTCCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---C-CEE--EEEEEECCCS-----
T ss_pred CCcccHHHHHHHHHHhh-hccCCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhCC---C-CCc--eEEEEecCcC-----
Confidence 99999999999997532 1122334457999999999999999999999999998 3 234 5556532110
Q ss_pred cccccceeeccCCCCcHHHHHHH-HHHHHHHHHHHHHhhhCCCCcccCCCCCCCC--CCCchHHHHHHHHHHHHhcCCCC
Q 011677 204 NLAIQDIMILPIGASSFGEALQM-GSETYHHLKAVIAEKYGAHGCNVGEDGGLAP--NISSIREGLDLVKEAINRTGIPS 280 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~-~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~--~~~~~~~~l~~v~~ai~~~g~~~ 280 (479)
.++. ....+++.+. ..++|+.+| .|.|.. .+... ..+.+.+.++.||+++ |.+
T Consensus 144 ~~~~---------~~~~~~~~~~~~~~Gf~~~K----~KvG~~-------~~~d~~~~~~~~~~~v~avReav---G~d- 199 (388)
T 3tcs_A 144 DITP---------RDEAERLKRLRDTQGFTAFK----VRAGAE-------VGRNRDEWPGRTEEIIPTMRREL---GDD- 199 (388)
T ss_dssp SSCH---------HHHHHHHHHHHHHHCCCEEE----EECSCT-------TCTTCCSSTTHHHHHHHHHHHHH---CSS-
T ss_pred CCCh---------HHHHHHHHHHHHhcCCCEEE----EccCCC-------cccccccchhHHHHHHHHHHHHh---CCC-
Confidence 0111 1112222222 134555554 454421 11000 0112345666666666 644
Q ss_pred Cce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhc
Q 011677 281 SKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVG 358 (479)
Q Consensus 281 ~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~g 358 (479)
..+ +|+| +.||.++++++. +.+++|++.|||||++++|++++++|++++ +||++
T Consensus 200 ~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 255 (388)
T 3tcs_A 200 VDLLIDAN-----------------------SCYTPDRAIEVG-HMLQDHGFCHFEEPCPYWELAQTKQVTDALDIDVTG 255 (388)
T ss_dssp SEEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCCEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred CeEEEeCC-----------------------CCcCHHHHHHHH-HHHhhcCCeEEECCCCccCHHHHHHHHHhcCCCEEc
Confidence 456 8883 367889999875 558999999999999999999999999999 99999
Q ss_pred CCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC-chhHHHHhHhhcCC
Q 011677 359 DDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET-EDSFIADLSVGLAS 437 (479)
Q Consensus 359 de~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get-~d~~~~dlAv~~~~ 437 (479)
||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++ +|+..++ .....+||+.++.+
T Consensus 256 dE~~-~~~~~~~~~i~~~a~d~v------~~d~~~~GGit~a~kia~~A~~~gv~~~-~h~~~~~~~~~a~~hl~aa~pn 327 (388)
T 3tcs_A 256 GEQD-CDLPTWQRMIDMRAVDIV------QPDILYLGGICRTLRVVEMARAAGLPVT-PHCANWSLVTLFTMHLLRAIPN 327 (388)
T ss_dssp CTTC-CCHHHHHHHHHHTCCSEE------CCCHHHHTSHHHHHHHHHHHHHTTCCBC-CCCCSTTTHHHHHHHHHTTCTT
T ss_pred CCcc-CCHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEE-ecCCCcHHHHHHHHHHHHhCCC
Confidence 9976 569999999999999999 9999999999999999999999999975 5655443 22355677777644
No 57
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=9.7e-41 Score=344.23 Aligned_cols=295 Identities=16% Similarity=0.144 Sum_probs=221.3
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. ++.+ ++.+.|+|+|++|++ |+||+..+. + +...++.
T Consensus 26 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~----------G~GE~~~~~--------~-~~~~~~~ 86 (383)
T 3toy_A 26 TAAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVT----------GHSYLFAYT--------R-LALKPLV 86 (383)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCE----------EEEEEECSS--------G-GGHHHHH
T ss_pred CCEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCE----------EEEEeeCCC--------C-chHHHHH
Confidence 5799999998873 2332 357999999999994 999986531 1 2234555
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+.+.++|.|+|+|+.+.+ +|+.|.+.......+++..+|++|||+||||+.||..|+|||++||| . +.+ +|+
T Consensus 87 ~i~~~l~p~l~G~d~~~~e-~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~-~~~--v~~ 159 (383)
T 3toy_A 87 HLVEDIGRELAGKALVPVD-LMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLGG---S-ARP--IPA 159 (383)
T ss_dssp HHHHHHHHHTTTCBCCHHH-HHHHHHHHTTTTCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---C-CCC--EEE
T ss_pred HHHHHHHHHhCCCCCCcHH-HHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCc--eEE
Confidence 6778899999999999999 99999763211112335568999999999999999999999999998 2 234 555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
|+. +|.. + .+...+++.+...+ +|+.+| .|.|. .+.+.+.+.++.||
T Consensus 160 y~s--~g~~-----~---------~e~~~~~a~~~~~~~G~~~~K----lKvG~------------~~~~~d~~~v~avR 207 (383)
T 3toy_A 160 YDS--YGVL-----D---------ARDDERTLRTACDEHGFRAIK----SKGGH------------GDLATDEAMIKGLR 207 (383)
T ss_dssp EEE--CSSC-----C---------HHHHHHHHHHHHHTSCCCEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred eEe--cCCC-----C---------HHHHHHHHHHHHHccCCcEEE----EecCC------------CCHHHHHHHHHHHH
Confidence 654 2310 1 11234444444444 565554 45331 12334566666666
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|
T Consensus 208 ~a~---G~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEeP~~~~d~~~~~~l 259 (383)
T 3toy_A 208 ALL---GPD-IALMLDFN-----------------------QSLDPAEATRRI-ARLADYDLTWIEEPVPQENLSGHAAV 259 (383)
T ss_dssp HHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHH
T ss_pred HHh---CCC-CeEEEeCC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEECCCCcchHHHHHHH
Confidence 666 644 456 8883 367889999875 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |++. .+.
T Consensus 260 ~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~d~v------~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~~~----~a~ 327 (383)
T 3toy_A 260 RERSEIPIQAGENWW-FPRGFAEAIAAGASDFI------MPDLMKVGGITGWLNVAGQADAASIPMSS-HILP----EAS 327 (383)
T ss_dssp HHHCSSCEEECTTCC-HHHHHHHHHHHTCCSEE------CCCTTTTTHHHHHHHHHHHHHHHTCCBCC-CSCH----HHH
T ss_pred HhhcCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEee-cCHH----HHH
Confidence 9999 9999999864 59999999999999999 99999999999999999999999999754 5443 356
Q ss_pred HHhHhhcC
Q 011677 429 ADLSVGLA 436 (479)
Q Consensus 429 ~dlAv~~~ 436 (479)
+|++.++.
T Consensus 328 lhl~aa~p 335 (383)
T 3toy_A 328 AHVLPVTP 335 (383)
T ss_dssp HHHGGGCT
T ss_pred HHHHHhCC
Confidence 78877763
No 58
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=9.5e-41 Score=343.39 Aligned_cols=295 Identities=18% Similarity=0.226 Sum_probs=224.1
Q ss_pred CceeeEEEEEEEec---------CCC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHH
Q 011677 44 PSVITKIKARQILD---------SRG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRA 109 (479)
Q Consensus 44 ~~~I~~I~~~~i~d---------s~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~a 109 (479)
+|+|++|+.+.+.- +.+ .++++|+|+|++|+ +|+||+.++ + +.|.+++..++
T Consensus 3 ~MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~---~-~~~~~~~~~~~ 68 (371)
T 2ps2_A 3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGI----------EGWGESTPF---G-SNYIASHPRGV 68 (371)
T ss_dssp CCCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSC----------EEEEEECCS---T-TTSSSCCHHHH
T ss_pred CCEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCC----------EEEEEEecC---C-cccCCCCHHHH
Confidence 47999999998841 112 24689999999998 499998765 1 46888888888
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 110 VKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 110 v~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
...+++ ++|.|+|+|+.+++++|+.|.+... + ..+|++|||+||||+.||..|+|||++||| ..+ -++
T Consensus 69 ~~~i~~-l~~~l~g~d~~~~~~~~~~l~~~~~----~--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~--~~v 136 (371)
T 2ps2_A 69 RAGIAT-MAPSLIGLDPRRVDRINDAMDDALL----G--HEDAKTAIDVACWDIFGKSVGLPVCELLGG---RTN--TRL 136 (371)
T ss_dssp HHHHHH-HHHHHTTSCTTCHHHHHHHHHHHCS----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CCS--SCE
T ss_pred HHHHHH-HHHHHCCCCcccHHHHHHHHHHHhc----c--cHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCC--Cce
Confidence 888886 9999999999999999999976321 1 258999999999999999999999999998 323 356
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLV 269 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v 269 (479)
|+|++++++ +.++ ..+++.+...++|+.+| .|.| . +....++.|
T Consensus 137 p~~~~~~~~-------~~~~---------~~~~a~~~~~~Gf~~iK----ik~g-------~---------~~~~~~e~v 180 (371)
T 2ps2_A 137 PLISSIYVG-------EPED---------MRARVAKYRAKGYKGQS----VKIS-------G---------EPVTDAKRI 180 (371)
T ss_dssp EBEEEECSC-------CHHH---------HHHHHHHHHTTTCCEEE----EECC-------S---------CHHHHHHHH
T ss_pred EEEEEeCCC-------CHHH---------HHHHHHHHHHhChheEE----eecC-------C---------CHHHHHHHH
Confidence 667766542 1121 23444444444554444 2322 1 123344444
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH-hhCCceeeecCCCccCHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC-ADYPIVSIEDPFDKEDWEHTK 347 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll-~~~~i~~iEdP~~~~D~~g~~ 347 (479)
+...+.+|.+ ..+ +|++ +.||.+++++++.. + ++|++ |||||++ |+++|+
T Consensus 181 ~avr~a~g~~-~~l~vDan-----------------------~~~~~~~a~~~~~~-l~~~~~i-~iE~P~~--~~~~~~ 232 (371)
T 2ps2_A 181 TAALANQQPD-EFFIVDAN-----------------------GKLSVETALRLLRL-LPHGLDF-ALEAPCA--TWRECI 232 (371)
T ss_dssp HHHTTTCCTT-CEEEEECT-----------------------TBCCHHHHHHHHHH-SCTTCCC-EEECCBS--SHHHHH
T ss_pred HHHHHhcCCC-CEEEEECC-----------------------CCcCHHHHHHHHHH-HHhhcCC-cCcCCcC--CHHHHH
Confidence 3333335654 456 8883 35688999988655 6 99999 9999998 999999
Q ss_pred HHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh
Q 011677 348 SVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS 426 (479)
Q Consensus 348 ~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~ 426 (479)
+|++++ +||++||.. +++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++|+. ||..+
T Consensus 233 ~l~~~~~iPI~~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~-es~i~ 304 (371)
T 2ps2_A 233 SLRRKTDIPIIYDELA-TNEMSIVKILADDAAEGI------DLKISKAGGLTRGRRQRDICLAAGYSVSVQETC-GSDIA 304 (371)
T ss_dssp HHHTTCCSCEEESTTC-CSHHHHHHHHHHTCCSEE------EEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSS-CCHHH
T ss_pred HHHhhCCCCEEeCCCc-CCHHHHHHHHHhCCCCEE------EechhhcCCHHHHHHHHHHHHHcCCeEEecCCC-cCHHH
Confidence 999999 999999976 569999999999999999 999999999999999999999999999988876 77655
Q ss_pred --HHHHhHhhcC
Q 011677 427 --FIADLSVGLA 436 (479)
Q Consensus 427 --~~~dlAv~~~ 436 (479)
+.+|||.++.
T Consensus 305 ~aa~~hlaa~~~ 316 (371)
T 2ps2_A 305 FAAIVHLAQTIP 316 (371)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHHhCC
Confidence 4556665553
No 59
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=7.4e-41 Score=344.29 Aligned_cols=290 Identities=14% Similarity=0.139 Sum_probs=223.0
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.+ .++++|+|+|+ |++ |+||+.. + ..++.
T Consensus 5 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~----------G~Ge~~~----------~---~~~~~ 60 (372)
T 3cyj_A 5 GPRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRK----------GLGYTYG----------D---VSVGR 60 (372)
T ss_dssp -CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEE----------EEEEEES----------C---THHHH
T ss_pred CCEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcE----------EEEeccC----------c---HHHHH
Confidence 5799999988772 2222 35689999999 984 9999853 1 23455
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhh-hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDL-DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~-~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
.+++.++|.|+|+|+.+++.+|+.|.+. +++++ ++++.+|++|||+||||+.||..|+|||++||| . +. ++|
T Consensus 61 ~i~~~l~~~l~g~d~~~~~~i~~~l~~~~~~~~~-~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg---~-~~--~vp 133 (372)
T 3cyj_A 61 FVESKLAGVAEGSDALSPPAVWARMQAAIRNAGR-PGVGAMAVSAVDIALWDLKARLLGLPLADALPR---F-HA--EVP 133 (372)
T ss_dssp HHHHHTHHHHTTSBTTCHHHHHHHHHHHTTTTCS-SBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSCC---C-CS--SEE
T ss_pred HHHHHHHHHHcCCCcccHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHhhhHcCCcHHHHhCC---C-CC--Cce
Confidence 6777899999999999999999998763 44433 557789999999999999999999999999998 2 23 455
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+|++ +|.+. .+.+ ..++++.+...++|+.+| .|.| . +.+.+.++++.||
T Consensus 134 ~~~~--~g~~~---~~~~---------~~~~~a~~~~~~G~~~~K----iKvG-------~------~~~~d~~~v~avr 182 (372)
T 3cyj_A 134 VYGS--GGFTS---YPLR---------RLQEQLGGWAAAGIPRVK----MKVG-------R------EPEKDPERVRAAR 182 (372)
T ss_dssp EEEE--CCCTT---SCHH---------HHHHHHHHHHHTTCCEEE----EECC-------S------SGGGHHHHHHHHH
T ss_pred EEEE--cCCCC---CCHH---------HHHHHHHHHHHcCCCEEE----EcCC-------C------CHHHHHHHHHHHH
Confidence 5664 23221 1112 234566666666776666 3433 1 2345677787777
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhC-CceeeecCCCccCHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADY-PIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~-~i~~iEdP~~~~D~~g~~~ 348 (479)
+++ |.+ ..+ +|+| +.||.+++++++.+ +++| +|.|||||++++|+++|++
T Consensus 183 ~a~---g~~-~~l~vDaN-----------------------~~~~~~~a~~~~~~-l~~~~~i~~iEqP~~~~d~~~~~~ 234 (372)
T 3cyj_A 183 EAI---GES-VELMVDAN-----------------------GAYTRKQALYWAGA-FAREAGISYLEEPVSSEDREGLRL 234 (372)
T ss_dssp HHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHHHH-HHHHHCCCEEECSSCTTCHHHHHH
T ss_pred HHh---CCC-CeEEEECC-----------------------CCCCHHHHHHHHHH-HHhhcCCcEEECCCCcccHHHHHH
Confidence 777 644 456 9984 35788999988755 8999 9999999999999999999
Q ss_pred HHhhh-h--hhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch
Q 011677 349 VLQIC-Q--QVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED 425 (479)
Q Consensus 349 L~~~~-~--~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d 425 (479)
|++++ + ||++||+..+ .++++++ .+++|++ ++|++++||||++++++++|+++|++++++++ .
T Consensus 235 l~~~~~~~ipIa~dE~~~~-~~~~~~~--~~a~d~i------~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-----~ 300 (372)
T 3cyj_A 235 LRDRGPGGVAIAAGEYEWT-LPQLHDL--AGCVDIL------QADVTRCGGITGLLRVDGICRGHQIPFSAHCA-----P 300 (372)
T ss_dssp HHHHSCTTCEEEECTTCCS-HHHHHHH--HTTCSEE------EECTTTTTHHHHHTTHHHHHHHHTCCEEECSC-----H
T ss_pred HHHhCCCCCCEECCCCccC-HHHHHHH--hCCCCEE------ecCchhhCCHHHHHHHHHHHHHcCCeecccch-----H
Confidence 99988 4 9999998765 8889998 8899999 99999999999999999999999999877654 3
Q ss_pred hHHHHhHhhcCC
Q 011677 426 SFIADLSVGLAS 437 (479)
Q Consensus 426 ~~~~dlAv~~~~ 437 (479)
...+|+|.++..
T Consensus 301 ~a~lhlaaa~~~ 312 (372)
T 3cyj_A 301 AVSAHACCAVES 312 (372)
T ss_dssp HHHHHHGGGCTT
T ss_pred HHHHHHHHhCCC
Confidence 456788777643
No 60
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=9.8e-41 Score=345.52 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=218.2
Q ss_pred CceeeEEEEEEEecC---CCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHH------
Q 011677 44 PSVITKIKARQILDS---RGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNIN------ 114 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds---~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~------ 114 (479)
||+|++|+++.+.-+ ..+.++.|+|+|++|++ |+||+... .......++
T Consensus 9 ~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~----------G~GE~~~~------------~~~~~~~~~~~~~~~ 66 (394)
T 3mkc_A 9 VAPIKSIEFIPVNYQASNWSQNTVVVKVTDENGVY----------GLGEADGS------------PDAILAYANIETEHK 66 (394)
T ss_dssp CCCEEEEEEEEEEEC----CEEEEEEEEEETTSCE----------EEEEECSC------------HHHHHHHHTCCCCBT
T ss_pred CCeEEEEEEEEEecCCCCCCccEEEEEEEECCCCe----------EEEEecCc------------HHHHHHHHhcccchh
Confidence 789999999998422 23567999999999994 99997531 111122222
Q ss_pred --HHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 115 --ERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 115 --~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+.++|.|+|+||.+.+++|+.|.+.......++...+|++|||+||||+.||.+|+|||++||| ..+.++| .|
T Consensus 67 ~~~~l~p~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~--~y 141 (394)
T 3mkc_A 67 WLTNITEKAIGRLPIEINAIWDAMYDATQWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLGG---TNKDKVH--PY 141 (394)
T ss_dssp TBCCTTTTTTTSCTTCHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEC--CE
T ss_pred hHHHHHHHhCCCChhHHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCC---CcCCeeE--EE
Confidence 2389999999999999999999763211111234578999999999999999999999999998 3344554 46
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHh-hhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAE-KYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~-K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..+++.. +...+.++. + ....+++.+...++|+++| . |.| .. ..+.+++.+.++.||+
T Consensus 142 ~s~~~~~--~~~~~~~~~-~----~~~~~~a~~~~~~G~~~~K----~~k~g-------~~---~~~~~~d~e~v~avR~ 200 (394)
T 3mkc_A 142 LTLYPAI--PVDASLDVA-I----KGYAPLLEKAKAHNIRAVK----VCVPI-------KA---DWSTKEVAYYLRELRG 200 (394)
T ss_dssp EECCCSC--C-CCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCT-------TC---CCCHHHHHHHHHHHHH
T ss_pred EecCCcC--CCCcchhhh-H----HHHHHHHHHHHHcCCCEEE----eCccC-------CC---ccCHHHHHHHHHHHHH
Confidence 5432101 000000000 0 0111233333334454444 3 332 10 0122344566666666
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCC-CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFK-SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~-t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
++ |.+ ..+ +|+| +.| |.++++++. +.++++++.|||||++++|++++++|
T Consensus 201 a~---G~d-~~l~vDaN-----------------------~~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~~~~l 252 (394)
T 3mkc_A 201 IL---GHD-TDMMVDYL-----------------------YRFTDWYEVARLL-NSIEDLELYFAEATLQHDDLSGHAKL 252 (394)
T ss_dssp HH---CSS-SEEEEECT-----------------------TCCCCHHHHHHHH-HHTGGGCCSEEESCSCTTCHHHHHHH
T ss_pred Hh---CCC-CeEEEeCC-----------------------CCCCCHHHHHHHH-HHhhhcCCeEEECCCCchhHHHHHHH
Confidence 65 644 355 8883 367 889999875 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--h
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--S 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~ 426 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++ .|+. ++.. +
T Consensus 253 ~~~~~iPIa~dE~~~-~~~~~~~~l~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i~~a 323 (394)
T 3mkc_A 253 VENTRSRICGAEMST-TRFEAEEWITKGKVHLL------QSDYNRCGGLTELRRITEMATANNVQVM-PHNW-KTGITSA 323 (394)
T ss_dssp HHHCSSCBEECTTCC-HHHHHHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCC-SCHHHHH
T ss_pred HhhCCCCEEeCCCCC-CHHHHHHHHHcCCCCeE------ecCccccCCHHHHHHHHHHHHHcCCEEe-ecCC-CcHHHHH
Confidence 9999 9999999865 59999999999999999 9999999999999999999999999986 5655 6655 4
Q ss_pred HHHHhHhhcCC
Q 011677 427 FIADLSVGLAS 437 (479)
Q Consensus 427 ~~~dlAv~~~~ 437 (479)
+.+||+.++..
T Consensus 324 a~~hlaaa~p~ 334 (394)
T 3mkc_A 324 AAIHYQFAVGN 334 (394)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHhCCC
Confidence 56777776643
No 61
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=1.5e-40 Score=341.53 Aligned_cols=293 Identities=17% Similarity=0.150 Sum_probs=228.1
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ ++++.|+|+|++| + |+||+...+. +.|.++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~----------G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-E----------GWGECVTMAG---PLYSSEYNDGAEHV 66 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-E----------EEEECCCBSS---SSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-E----------EEEEecCCCC---CccccCcHHHHHHH
Confidence 589999888763 2322 4579999999999 7 9999876532 46888999999988
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+|+.+++++|+.|..+.+ +.+|++|||+||||+.||..|+|||++||| . +.++|++ |
T Consensus 67 i~~~l~~~l~g~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~~~~~-~ 134 (368)
T 1sjd_A 67 LRHYLIPALLAAEDITAAKVTPLLAKFKG-------HRMAKGALEMAVLDAELRAHERSFAAELGS---V-RDSVPCG-V 134 (368)
T ss_dssp HHHTHHHHHHHSSSCCHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHTC---C-CSEEEBE-E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCCccce-E
Confidence 99889999999999999999988754321 257999999999999999999999999998 3 3456665 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
++ |.+. +.++ ..+++.+...++|+.+| .| ++ + +.+.+.++.||++
T Consensus 135 ~~---g~~~----~~~~---------~~~~a~~~~~~Gf~~vK----ik-------~~------~--~~~~e~v~avr~~ 179 (368)
T 1sjd_A 135 SV---GIMD----TIPQ---------LLDVVGGYLDEGYVRIK----LK-------IE------P--GWDVEPVRAVRER 179 (368)
T ss_dssp EE---CCCS----CHHH---------HHHHHHHHHHHTCSEEE----EE-------CB------T--TBSHHHHHHHHHH
T ss_pred Ee---eCCC----CHHH---------HHHHHHHHHHhCccEEE----Ee-------cC------c--hhHHHHHHHHHHh
Confidence 42 2210 1121 23455555555565554 23 11 2 2357788888887
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..+ +|+| +.||.++ ++++ +.+++|++.|||||++++|+++|++|++
T Consensus 180 ~---g~~-~~l~vDan-----------------------~~~~~~~-~~~~-~~l~~~~i~~iE~P~~~~~~~~~~~l~~ 230 (368)
T 1sjd_A 180 F---GDD-VLLQVDAN-----------------------TAYTLGD-APQL-ARLDPFGLLLIEQPLEEEDVLGHAELAR 230 (368)
T ss_dssp H---CTT-SEEEEECT-----------------------TCCCGGG-HHHH-HTTGGGCCSEEECCSCTTCHHHHHHHHT
T ss_pred c---CCC-ceEEEecc-----------------------CCCCHHH-HHHH-HHHHhcCCCeEeCCCChhhHHHHHHHHH
Confidence 7 644 345 8883 2567778 8775 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FI 428 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~ 428 (479)
++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++|++|+. |+..+ +.
T Consensus 231 ~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~-es~i~~aa~ 302 (368)
T 1sjd_A 231 RIQTPICLDESI-VSARAAADAIKLGAVQIV------NIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMI-ETGLGRAAN 302 (368)
T ss_dssp TCSSCEEESTTC-CSHHHHHHHHHTTCCSEE------EECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC-CCHHHHHHH
T ss_pred hCCCCEEECCCc-CCHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCcEEeCCcc-ccHHHHHHH
Confidence 99 999999985 669999999999999999 999999999999999999999999999999986 66554 45
Q ss_pred HHhHhhcC
Q 011677 429 ADLSVGLA 436 (479)
Q Consensus 429 ~dlAv~~~ 436 (479)
+||| ++.
T Consensus 303 ~hla-a~~ 309 (368)
T 1sjd_A 303 VALA-SLP 309 (368)
T ss_dssp HHHH-TST
T ss_pred HHHH-cCC
Confidence 6776 543
No 62
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=7.2e-41 Score=344.11 Aligned_cols=299 Identities=15% Similarity=0.121 Sum_probs=224.7
Q ss_pred ceeeEEEEEEEec--------CC----CCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQILD--------SR----GIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~d--------s~----g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+++.+.- |. ....+.|+|+ ++|+ +|+||+..+.. +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGL----------VGVGEGGSVGG---PVWSAECAETIKII 66 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSC----------BCCEECCCBTT---BTTSSCCHHHHHHH
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCc----------EEEEccccCCC---CCCCCCCHHHHHHH
Confidence 6899999988831 22 2456999999 9998 59999876532 35888888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
|++.++|.|+|+||.+.+++|+.|.+... +. ..|++|||+||||+.||..|+|||++||| ..+.++|+ +
T Consensus 67 i~~~l~p~l~G~d~~~~~~~~~~l~~~~~----g~--~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~r~~v~~--~ 135 (370)
T 1chr_A 67 VERYLAPHLLGTDAFNVSGALQTMARAVT----GN--ASAKAAVEMALLDLKARALGVSIAELLGG---PLRSAIPI--A 135 (370)
T ss_dssp HHHHTHHHHTTSCTTCHHHHHHHHHHHCS----SC--HHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSEEEB--E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHHhc----Cc--HHHHHHHHHHHHHHHHHHcCCCHHHHhCC---CCCCceeE--E
Confidence 98889999999999999999999976321 11 57999999999999999999999999998 33456665 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHH-HHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGS-ETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~-e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++.|. . ...++++.+... ++|+.+| .|.| . .+.+.+.+.++.||+
T Consensus 136 ~t~~~~~-------~---------~~~~~~~~~~~~~~G~~~~K----iKvg-------~-----~~~~~d~~~v~avR~ 183 (370)
T 1chr_A 136 WTLASGD-------T---------KRDLDSAVEMIERRRHNRFK----VKLG-------F-----RSPQDDLIHMEALSN 183 (370)
T ss_dssp EEECSSS-------H---------HHHHHHHHHHHHTTCCCEEE----EECS-------S-----SCSHHHHHHHHHHHH
T ss_pred EEecCCC-------c---------HHHHHHHHHHHHHCCCCEEE----EecC-------C-----CCHHHHHHHHHHHHH
Confidence 3332220 0 112334433333 3444443 3433 1 122344555555555
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||++++|++++++|+
T Consensus 184 ~~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~~~~~~~l~ 235 (370)
T 1chr_A 184 SL---GSK-AYLRVDVN-----------------------QAWDEQVASVYI-PELEALGVELIEQPVGRENTQALRRLS 235 (370)
T ss_dssp HS---STT-CCEEEECT-----------------------TCCCTTHHHHHT-HHHHTTTEEEEECCSCTTCHHHHHHHH
T ss_pred hc---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCcccHHHHHHHH
Confidence 54 644 356 8983 356778888765 558999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--H
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--F 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~ 427 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+..+ +
T Consensus 236 ~~~~iPia~dE~~-~~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa 307 (370)
T 1chr_A 236 DNNRVAIMADESL-STLASAFDLARDRSVDVF------SLKLCNMGGVSATQKIAAVAEASGIASYGGTM-LDSTIGTSV 307 (370)
T ss_dssp HHSCSEEEESSSC-CSHHHHHHHHTTTSCSEE------EECTTTSCSHHHHHHHHHHHHHHTCEEEECCS-CCTTHHHHH
T ss_pred hhCCCCEEeCCCc-CCHHHHHHHHHcCCCCEE------EECccccCCHHHHHHHHHHHHHcCCeEEecCC-CccHHHHHH
Confidence 999 999999986 459999999999999999 99999999999999999999999999877665 455444 5
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+||+.++.
T Consensus 308 ~~hlaaa~~ 316 (370)
T 1chr_A 308 ALQLYSTVP 316 (370)
T ss_dssp HHHHHTTSS
T ss_pred HHHHHHhCC
Confidence 566666553
No 63
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=2.8e-41 Score=347.93 Aligned_cols=298 Identities=12% Similarity=0.092 Sum_probs=222.6
Q ss_pred CceeeEEEEEEEe--------cCCC----Cc-eEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IP-TVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~-~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
||+|++|+++.+. ++.| .. .+.|+|+|++|++ |+||+.++. .|. ++...+.
T Consensus 5 ~~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~-----~~~-e~~~~~~ 68 (377)
T 3my9_A 5 DSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIV----------GWGEAAPWE-----VFT-GTPEAAF 68 (377)
T ss_dssp CCBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCE----------EEEEECCC-----------CHHHHH
T ss_pred cCEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCE----------EEEecccCC-----CcC-CCHHHHH
Confidence 8999999999883 2222 35 7999999999994 999987642 233 5677777
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..|++.++|.|+|+||.+.+++|+.|.+... + ..+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 69 ~~i~~~l~p~liG~d~~~~~~~~~~l~~~~~----~--~~~A~said~AlwDl~gk~~g~Pl~~LLGg---~~r~~v~~- 138 (377)
T 3my9_A 69 SALDIYLRPLILGAPIKRVRELMARMDKMLV----G--HGEAKAAVEMALLDILGKATGLSVADLLGG---RVRDRIPL- 138 (377)
T ss_dssp HHHHTTTHHHHTTCBTTCHHHHHHHHHHHSC----S--CHHHHHHHHHHHHHHHHHHHTCBTTGGGTC---CSCSEEEB-
T ss_pred HHHHHHHHHHhCCCCcCCHHHHHHHHHHHhc----C--chhHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCCCeEEE-
Confidence 7787779999999999999999999976321 1 157999999999999999999999999998 33455555
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+..++.+ +. ....+++.+...++|+.+| .|.|. .+.+.+.+.++.||
T Consensus 139 -~~t~~~~-------~~---------~~~~~~a~~~~~~G~~~~K----~Kvg~------------~~~~~d~~~v~avR 185 (377)
T 3my9_A 139 -SFSIADP-------DF---------DADLERMRAMVPAGHTVFK----MKTGV------------KPHAEELRILETMR 185 (377)
T ss_dssp -CEEECCS-------SH---------HHHHHHHHHHTTTTCCEEE----EECSS------------SCHHHHHHHHHHHH
T ss_pred -EEecCCC-------CH---------HHHHHHHHHHHHcCCCEEE----EccCC------------CcHHHHHHHHHHHH
Confidence 4333211 11 1123344444444565554 44331 12334566777777
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|
T Consensus 186 ~~~---g~~-~~l~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l 237 (377)
T 3my9_A 186 GEF---GER-IDLRLDFN-----------------------QALTPFGAMKIL-RDVDAFRPTFIEQPVPRRHLDAMAGF 237 (377)
T ss_dssp HHH---GGG-SEEEEECT-----------------------TCCCTTTHHHHH-HHHHTTCCSCEECCSCTTCHHHHHHH
T ss_pred HHh---CCC-CeEEEeCC-----------------------CCcCHHHHHHHH-HHHhhcCCCEEECCCCccCHHHHHHH
Confidence 776 433 345 8883 356777888765 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--h
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--S 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~ 426 (479)
++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+.. +
T Consensus 238 ~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~-~es~i~~a 309 (377)
T 3my9_A 238 AAALDTPILADESC-FDAVDLMEVVRRQAADAI------SVKIMKCGGLMKAQSLMAIADTAGLPGYGGTL-WEGGIALA 309 (377)
T ss_dssp HHHCSSCEEESTTC-SSHHHHHHHHHHTCCSEE------ECCHHHHTSHHHHHHHHHHHHHHTCCEECCEE-CCSHHHHH
T ss_pred HHhCCCCEEECCcc-CCHHHHHHHHHcCCCCEE------EecccccCCHHHHHHHHHHHHHcCCeEecCCC-CCcHHHHH
Confidence 9999 999999976 459999999999999999 99999999999999999999999999977665 45544 4
Q ss_pred HHHHhHhhcC
Q 011677 427 FIADLSVGLA 436 (479)
Q Consensus 427 ~~~dlAv~~~ 436 (479)
+.+||+.++.
T Consensus 310 a~~hlaaa~~ 319 (377)
T 3my9_A 310 AGTQLIAATP 319 (377)
T ss_dssp HHHHHHHTCT
T ss_pred HHHHHHHhCC
Confidence 5566666653
No 64
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=7.6e-41 Score=343.15 Aligned_cols=295 Identities=20% Similarity=0.245 Sum_probs=223.4
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.| +..+.|+|+|++|++ |+||+.++ +.|.+++...+..
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~ 68 (365)
T 3ik4_A 4 PTTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTL----------GLGEAAPF-----PAVSGETQTGTSA 68 (365)
T ss_dssp TTBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCE----------EEEEECCC-----CTTTCCCHHHHHH
T ss_pred CCEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCE----------EEEecccC-----CCcCcCCHHHHHH
Confidence 5799999998883 2222 357899999999984 99998765 4577888888877
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+ +.++|.|+|+|+.+.+++|+.|.+... . ..+|++|||+||||+.||..|+|||++||| . +.++|+
T Consensus 69 ~l-~~l~~~l~G~d~~~~~~~~~~l~~~~~----~--~~~a~said~ALwDl~gk~~g~Pl~~LLGg---~-~~~v~~-- 135 (365)
T 3ik4_A 69 AI-ERLQSHLLGADVRGWRKLAAMLDHAEH----E--AAAARCGLEMAMLDALTRHYHMPLHVFFGG---V-SKQLET-- 135 (365)
T ss_dssp HH-HHHGGGTTTCBGGGHHHHHHHHHHHCT----T--CHHHHHHHHHHHHHHHHHHTTCBHHHHTTC---S-CSEEEB--
T ss_pred HH-HHHHHHHcCCCccCHHHHHHHHHHHhc----c--cHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceee--
Confidence 77 479999999999999999999976321 1 257999999999999999999999999998 3 244444
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
+..++.+ + .+...+++.+...++|+.+| .|.|. .+.+.+.+.++.||+
T Consensus 136 ~~~~~~~-------~---------~e~~~~~a~~~~~~G~~~iK----~Kvg~------------~~~~~d~~~v~avr~ 183 (365)
T 3ik4_A 136 DMTITAG-------D---------EVHAAASAKAILARGIKSIK----VKTAG------------VDVAYDLARLRAIHQ 183 (365)
T ss_dssp CEEECCS-------C---------HHHHHHHHHHHHHTTCCCEE----EECCS------------SCHHHHHHHHHHHHH
T ss_pred eEEecCC-------C---------HHHHHHHHHHHHHcCCCEEE----EEeCC------------CCHHHHHHHHHHHHH
Confidence 4333211 1 11223344444445565554 45331 112344555666655
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH--hhCCceeeecCCCccCHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC--ADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll--~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
++ + + ..+ +|+| +.||.++++++. +.+ ++|+|.|||||++++|++++++
T Consensus 184 ~~---~-~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~~~i~~iEeP~~~~d~~~~~~ 234 (365)
T 3ik4_A 184 AA---P-T-APLIVDGN-----------------------CGYDVERALAFC-AACKAESIPMVLFEQPLPREDWAGMAQ 234 (365)
T ss_dssp HS---S-S-CCEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCCEEEEECCSCTTCHHHHHH
T ss_pred hC---C-C-CeEEEECC-----------------------CCCCHHHHHHHH-HHHhhCCCCceEEECCCCcccHHHHHH
Confidence 54 3 2 356 9984 367889999875 457 8899999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED-- 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d-- 425 (479)
|++++ +||++||+. +++++++++++.+++|++ |+|+++ ||||++++++++|+++|++++++++ .|+..
T Consensus 235 l~~~~~ipIa~dE~~-~~~~~~~~~i~~~a~d~v------~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~~-~es~ig~ 305 (365)
T 3ik4_A 235 VTAQSGFAVAADESA-RSAHDVLRIAREGTASVI------NIKLMK-AGVAEGLKMIAIAQAAGLGLMIGGM-VESILAM 305 (365)
T ss_dssp HHHHSSSCEEESTTC-SSHHHHHHHHHHTCCSEE------EECHHH-HCHHHHHHHHHHHHHHTCEEEECCS-SCCHHHH
T ss_pred HHhhCCCCEEECCCC-CCHHHHHHHHHhCCCCEE------EEcCCc-cCHHHHHHHHHHHHHcCCeEEecCC-cccHHHH
Confidence 99999 999999985 569999999999999999 999999 9999999999999999999977654 46644
Q ss_pred hHHHHhHhhcC
Q 011677 426 SFIADLSVGLA 436 (479)
Q Consensus 426 ~~~~dlAv~~~ 436 (479)
++.+|||.++.
T Consensus 306 aa~~hlaaa~p 316 (365)
T 3ik4_A 306 SFSANLAAGNG 316 (365)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhCC
Confidence 56677777654
No 65
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=2.5e-40 Score=345.41 Aligned_cols=310 Identities=15% Similarity=0.183 Sum_probs=222.7
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|+...+ ..+++.+.|+|+|++|++ |+||+.. .+++ ..+...|++.++|.|+|
T Consensus 22 ~mkIt~v~~~~~--~~~~~~v~V~v~td~Gi~----------G~GE~~~---------~g~~-~~~~~~l~~~l~p~LiG 79 (426)
T 4e4f_A 22 SMKIVSAEVFVT--CPGRNFVTLKITTDSGLT----------GLGDATL---------NGRE-LPVASYLNDHVCPQLIG 79 (426)
T ss_dssp CCBEEEEEEEEE--CSSSCEEEEEEEETTSCE----------EEEECCC---------TTCH-HHHHHHHHHTHHHHHTT
T ss_pred CcEEEEEEEEEE--cCCCCEEEEEEEECCCCE----------EEEeccc---------CCCc-HHHHHHHHHHHHHHHcC
Confidence 689999999866 235678999999999994 9999753 2222 23455677889999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+.+++|+.|++.. ....+.+..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |....|.
T Consensus 80 ~dp~~ie~i~~~l~~~~-~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~~~~~~----- 148 (426)
T 4e4f_A 80 RDAHQIEDIWQYFYKGA-YWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGG---ASRTGVMV--YCHTTGH----- 148 (426)
T ss_dssp SBTTCHHHHHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTC---CSSSSEEE--EEEECCS-----
T ss_pred CChhhHHHHHHHHHhhc-cccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcCC---CCCCceeE--eEeCCCC-----
Confidence 99999999999998632 1223445578999999999999999999999999998 33445555 5432221
Q ss_pred cccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcc--c----CCCCCCCCCC----------------Cc
Q 011677 204 NLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCN--V----GEDGGLAPNI----------------SS 261 (479)
Q Consensus 204 ~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~--v----g~~G~~~~~~----------------~~ 261 (479)
+.. ...+++.+...++|+++| .|.|..... . +..-.+.+.. +.
T Consensus 149 --~~~---------~~~~~~~~~~~~Gf~~iK----ikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (426)
T 4e4f_A 149 --SID---------EVLDDYAKHRDQGFKAIR----VQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDF 213 (426)
T ss_dssp --SHH---------HHHHHHHHHHHTTCSEEE----ECC-------------------CCSEESSSCCEEEECHHHHHHH
T ss_pred --CHH---------HHHHHHHHHHHcCCCEEE----EeccCCccccccccccccccccccccccccccccccchhHHHHH
Confidence 111 123344444455666655 454421100 0 0000011100 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 262 IREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 262 ~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
+.+.++.||+++ |.+ ..+ +|+| +.||.++++++. +.+++|++.|||||+++
T Consensus 214 ~~e~v~avR~a~---G~d-~~L~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~ 265 (426)
T 4e4f_A 214 TPKLFEAVRDKF---GFN-EHLLHDMH-----------------------HRLTPIEAARFG-KSVEDYRLFWMEDPTPA 265 (426)
T ss_dssp HHHHHHHHHHHH---TTS-SEEEEECT-----------------------TCSCHHHHHHHH-HHTGGGCCSEEECCSCC
T ss_pred HHHHHHHHHHHh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCEEECCCCh
Confidence 134566666666 644 455 8883 367899999875 55899999999999999
Q ss_pred cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC
Q 011677 341 EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 341 ~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~ 419 (479)
+|++++++|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++ ++|.
T Consensus 266 ~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~ga~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~v-~~h~ 337 (426)
T 4e4f_A 266 ENQACFRLIRQHTVTPIAVGEVFN-SIWDCKQLIEEQLIDYI------RTTITHAGGITGMRRIADFASLYQVRT-GSHG 337 (426)
T ss_dssp SSGGGGHHHHTTCCSCEEECTTCC-SGGGTHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHTTTCEE-EECC
T ss_pred HHHHHHHHHHhcCCCCEEeCCCcC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEE-eeeC
Confidence 9999999999999 9999999865 59999999999999999 999999999999999999999999996 5575
Q ss_pred C-CCCch--hHHHHhHhhcCC
Q 011677 420 S-GETED--SFIADLSVGLAS 437 (479)
Q Consensus 420 ~-get~d--~~~~dlAv~~~~ 437 (479)
+ .++.. ++.+|||.++.+
T Consensus 338 ~~~~s~i~~aa~~hlaaa~pn 358 (426)
T 4e4f_A 338 PSDLSPICMAAALHFDLWVPN 358 (426)
T ss_dssp CTTSCHHHHHHHHHHHHHCTT
T ss_pred CCCccHHHHHHHHHHHHhCCC
Confidence 3 35533 566777776643
No 66
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=6.7e-40 Score=339.80 Aligned_cols=312 Identities=17% Similarity=0.175 Sum_probs=231.6
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.| +..+.|+|+| +|++ |+||+.++.. +.|.+++...+..
T Consensus 6 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~----------G~GE~~~~~~---p~~~~et~~~~~~ 71 (400)
T 3mwc_A 6 SARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLF----------GYGESAPFEE---PFYLGETLETTKV 71 (400)
T ss_dssp CCCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEE----------EEEEECCBSS---TTSTTCBHHHHHH
T ss_pred CcEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeE----------EEEecccCCC---CccccCcHHHHHH
Confidence 5799999999883 2222 3579999999 9984 9999877532 4688899998888
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcc---cC------C
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADL---AG------K 182 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~---~~------~ 182 (479)
.|++.++|.|+|+||.+.+++|+.|.... .+. ..|++|||+||||+.||..|+|||++|||. .+ .
T Consensus 72 ~i~~~l~p~liG~d~~~~e~~~~~l~~~~----~g~--~~A~said~ALwDl~gk~~g~Pl~~LLGG~~~~~~~~~~~~~ 145 (400)
T 3mwc_A 72 ILKNHLLPMILGKEPLSIEEFNHLIKNGI----RGN--HFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLA 145 (400)
T ss_dssp HHHHTHHHHHTTCCCSSHHHHHHHHHHSC----CSC--HHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHTTCCGGGGC
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHh----cCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCccccccccccccc
Confidence 89888999999999999999999998621 121 359999999999999999999999999950 00 0
Q ss_pred CCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCch
Q 011677 183 TNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSI 262 (479)
Q Consensus 183 ~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~ 262 (479)
.+.++|+ +..+ |... ..+ .+...+++.+...++|+.+| .|.| + +.+
T Consensus 146 ~r~~v~~--~~s~--g~~~--~~~---------~e~~~~~a~~~~~~G~~~iK----lKv~-------------~--~~d 191 (400)
T 3mwc_A 146 SNNYIES--GAAL--GIPE--DGR---------IETLIHQVEESLQEGYRRIK----IKIK-------------P--GWD 191 (400)
T ss_dssp BCSEEEB--CEEE--CCCT--TCC---------HHHHHHHHHHHHHHTCSCEE----EECB-------------T--TBS
T ss_pred CCCeEEe--eEEe--ccCC--CCC---------HHHHHHHHHHHHHcCCCEEE----EEeC-------------c--chH
Confidence 1345554 4432 2100 000 11223344444445565554 3421 2 245
Q ss_pred HHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCcc
Q 011677 263 REGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKE 341 (479)
Q Consensus 263 ~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~ 341 (479)
.+.++.||+++ |.+ ..+ +|+| +.||.++ +++. +.+++|++.|||||++++
T Consensus 192 ~~~v~avR~a~---G~~-~~L~vDaN-----------------------~~w~~~~-~~~~-~~l~~~~i~~iEqP~~~~ 242 (400)
T 3mwc_A 192 VEPLQETRRAV---GDH-FPLWTDAN-----------------------SSFELDQ-WETF-KAMDAAKCLFHEQPLHYE 242 (400)
T ss_dssp HHHHHHHHHHH---CTT-SCEEEECT-----------------------TCCCGGG-HHHH-HHHGGGCCSCEESCSCTT
T ss_pred HHHHHHHHHhc---CCC-CEEEEeCC-----------------------CCCCHHH-HHHH-HHHHhcCCCEEeCCCChh
Confidence 77888888877 544 456 9983 3567777 7665 568999999999999999
Q ss_pred CHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCC
Q 011677 342 DWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRS 420 (479)
Q Consensus 342 D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ 420 (479)
|++++++|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++++++
T Consensus 243 d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~- 314 (400)
T 3mwc_A 243 ALLDLKELGERIETPICLDESLI-SSRVAEFVAKLGISNIW------NIKIQRVGGLLEAIKIYKIATDNGIKLWGGTM- 314 (400)
T ss_dssp CHHHHHHHHHHSSSCEEESTTCC-SHHHHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCS-
T ss_pred hHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHhcCCCCEE------EEcchhhCCHHHHHHHHHHHHHcCCEEEecCC-
Confidence 999999999999 9999999865 59999999999999999 99999999999999999999999999877654
Q ss_pred CCCchhHHHHhHhhcCCCCcccCCCC
Q 011677 421 GETEDSFIADLSVGLASGQIKAGAPC 446 (479)
Q Consensus 421 get~d~~~~dlAv~~~~~~ik~G~~~ 446 (479)
.|+..+..+.++++....+..++...
T Consensus 315 ~es~i~~aa~~hlaa~~~~~~~~d~~ 340 (400)
T 3mwc_A 315 PESGLGARFLISLASFRGFVFPADVA 340 (400)
T ss_dssp CCCHHHHHHHHHHTTBTTBCSCBCCC
T ss_pred CCCHHHHHHHHHHHcCCCCcceeccC
Confidence 57766555555554434444444443
No 67
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=8.5e-41 Score=345.32 Aligned_cols=296 Identities=18% Similarity=0.244 Sum_probs=227.5
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. ++.| +..+.|+|+|++|++ |+||+.++ +.|.+++...+..
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~ 68 (389)
T 3s5s_A 4 PTLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTL----------GFGEAAPL-----PAFNGETQDGSRA 68 (389)
T ss_dssp TTBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCE----------EEEEECCC-----HHHHSCCHHHHHH
T ss_pred CCEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCE----------EEEeccCC-----CCcCccCHHHHHH
Confidence 5799999998873 3333 357899999999984 99998765 3466777777777
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.++ .++|.|+|+||.+.+++|+.|.+... .+ +.+|++|||+||||+.||..|+|||++||| . ..++|+
T Consensus 69 ~l~-~l~~~l~G~d~~~~~~~~~~l~~~~~-~~----~~~A~said~ALwDl~gk~~g~Pl~~LLGg---~-~~~v~~-- 136 (389)
T 3s5s_A 69 AAV-SLREAVVGSDARAWRAVARALREASG-GG----AGAARCAIETAILDALTKRAGMPLWAFFGG---S-GTALTT-- 136 (389)
T ss_dssp HHH-HTHHHHTTSBGGGHHHHHHHHHHHHT-TC----CHHHHHHHHHHHHHHHHHTTTCBHHHHTTC---S-CSEEEC--
T ss_pred HHH-HHHHHhcCCCccCHHHHHHHHHHhhc-cC----hHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceEE--
Confidence 774 69999999999999999999976321 11 137999999999999999999999999998 3 244554
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
+..++.+ ..+...+++.+...++|+.+| .|.|. .+.+++.++++.||+
T Consensus 137 ~~t~~~~----------------~~e~~~~~a~~~~~~G~~~iK----lKvg~------------~~~~~d~~~v~avR~ 184 (389)
T 3s5s_A 137 DITITTG----------------SPERAEEAARRAAAMGFRALK----VKVGG------------RLAASDPARIEAIHA 184 (389)
T ss_dssp CEEECSS----------------CSHHHHHHHHHHHHHTCCEEE----EECCG------------GGTTTHHHHHHHHHH
T ss_pred EeeecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEecC------------CChHHHHHHHHHHHH
Confidence 3333211 112234455555556676665 45431 113456777777777
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH--hhCCceeeecCCCccCHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC--ADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll--~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
++ | + .++ +|+| +.||.++++++.. .+ ++|+|.|||||++++|++++++
T Consensus 185 ~~---~-~-~~L~vDaN-----------------------~~w~~~~A~~~~~-~L~~~~~~i~~iEeP~~~~d~~~~~~ 235 (389)
T 3s5s_A 185 AA---P-G-ASLILDGN-----------------------GGLTAGEALALVA-HARRLGADVALLEQPVPRDDWDGMKE 235 (389)
T ss_dssp HC---T-T-CEEEEECT-----------------------TCSCHHHHHHHHH-HHHHTTCEEEEEECCSCTTCHHHHHH
T ss_pred hC---C-C-CeEEEECC-----------------------CCCCHHHHHHHHH-HHhhCCCCeEEEECCCCcccHHHHHH
Confidence 66 3 2 356 9984 3678999998754 57 8899999999999999999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCc--h
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETE--D 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~--d 425 (479)
|++++ +||++||+.. ++++++++++.+++|++ ++|+++ ||||++++++++|+++|++++++++ .|+. .
T Consensus 236 l~~~~~iPIa~dEs~~-~~~~~~~~i~~~a~d~v------~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~~-~es~ig~ 306 (389)
T 3s5s_A 236 VTRRAGVDVAADESAA-SAEDVLRVAAERAATVV------NIKLMK-GGIAEALDIAAVARAAGLGLMIGGM-VESVLAM 306 (389)
T ss_dssp HHHHSSSCEEESTTCS-SHHHHHHHHHTTCCSEE------EECHHH-HHHHHHHHHHHHHHHTTCEEEECCS-SCCHHHH
T ss_pred HHhhCCCCEEECCCCC-CHHHHHHHHHcCCCCEE------EecCCC-CCHHHHHHHHHHHHHcCCeEEecCC-cccHHHH
Confidence 99999 9999999864 59999999999999999 999999 9999999999999999999987655 4654 4
Q ss_pred hHHHHhHhhcC
Q 011677 426 SFIADLSVGLA 436 (479)
Q Consensus 426 ~~~~dlAv~~~ 436 (479)
++.+|||.++.
T Consensus 307 aa~~hlaaa~p 317 (389)
T 3s5s_A 307 TASACFAAGLG 317 (389)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhhCC
Confidence 56777777654
No 68
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=1.3e-40 Score=344.04 Aligned_cols=298 Identities=15% Similarity=0.084 Sum_probs=221.1
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. ++.+ .+.+.|+|+|++|+ +|+||+..+ .+ +...++.
T Consensus 27 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~----------~G~GE~~~~--------~~-~~~~~~~ 87 (390)
T 3ugv_A 27 TLTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGV----------PGRAYLEPY--------VP-KAMKYLV 87 (390)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSC----------CEEEEECCS--------CG-GGHHHHH
T ss_pred CCEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCC----------EEEEEeecC--------CC-chHHHHH
Confidence 4799999999873 3333 35799999999998 599998653 11 2234555
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+.+.++|.|+|+|+.+. ++|+.|.+.......+++..+|++|||+||||+.||..|+|||++||| . +.+ +|+
T Consensus 88 ~~~~~l~p~liG~d~~~~-~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~-~~~--v~~ 160 (390)
T 3ugv_A 88 PALHDMSDMLAGQPLAPA-EIYDKTRKSLHFVGYAGLSMIAASGVDMAVWDALARAANMPLCTLLGG---T-PGS--VKA 160 (390)
T ss_dssp HHHHHHHHHHTTSBCCHH-HHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTC---C-CCE--EEE
T ss_pred HHHHHHHHHHCCCCcchH-HHHHHHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhCC---C-CCc--eEE
Confidence 677889999999999999 999999763211112335578999999999999999999999999998 2 234 555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH---HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE---TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDL 268 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e---~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~ 268 (479)
|..++ ++.. .+ .+...+++.+...+ +|+.+| .|.|. ++.+.+.+.++.
T Consensus 161 y~s~g-~~~~---~~---------~e~~~~~a~~~~~~~~~G~~~iK----lKvG~------------~~~~~d~~~v~a 211 (390)
T 3ugv_A 161 YNSNG-LWLK---SP---------AEVAAEAVELKAEGQGTGFKGLK----LRMGR------------DDPAVDIETAEA 211 (390)
T ss_dssp EECSC-CCSS---CH---------HHHHHHHHHHHHTTCTTCCSEEE----EECCC------------SSHHHHHHHHHH
T ss_pred EEecc-cccC---CC---------HHHHHHHHHHHHHhhhCCCcEEE----EecCC------------CCHHHHHHHHHH
Confidence 66543 2110 01 11223344444444 565554 45331 123345666666
Q ss_pred HHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHH
Q 011677 269 VKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTK 347 (479)
Q Consensus 269 v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~ 347 (479)
||+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|+++++
T Consensus 212 vR~a~---G~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d~~~~~ 263 (390)
T 3ugv_A 212 VWDAV---GRD-TALMVDFN-----------------------QGLDMAEAMHRT-RQIDDLGLEWIEEPVVYDNFDGYA 263 (390)
T ss_dssp HHHHH---CTT-SEEEEECT-----------------------TCCCHHHHHHHH-HHHTTSCCSEEECCSCTTCHHHHH
T ss_pred HHHHh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhhCCCEEECCCCcccHHHHH
Confidence 66666 644 456 8883 367889999875 558999999999999999999999
Q ss_pred HHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh
Q 011677 348 SVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS 426 (479)
Q Consensus 348 ~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~ 426 (479)
+|++++ +||++||+. .++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+.. .
T Consensus 264 ~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v------~ik~~~~GGit~~~~i~~~A~~~gi~~~~-h~~~----~ 331 (390)
T 3ugv_A 264 QLRHDLKTPLMIGENF-YGPREMHQALQAGACDLV------MPDFMRIGGVSGWMRAAGVAGAWGIPMST-HLYP----E 331 (390)
T ss_dssp HHHHHCSSCEEECTTC-CSHHHHHHHHHTTCCSEE------CCBHHHHTHHHHHHHHHHHHHHHTCCBCC-BSCH----H
T ss_pred HHHHhcCCCEEeCCCc-CCHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEee-cCHH----H
Confidence 999999 999999976 569999999999999999 99999999999999999999999999754 5443 3
Q ss_pred HHHHhHhhcC
Q 011677 427 FIADLSVGLA 436 (479)
Q Consensus 427 ~~~dlAv~~~ 436 (479)
+.+|++.++.
T Consensus 332 a~lhl~aa~p 341 (390)
T 3ugv_A 332 VGAHVMRVTE 341 (390)
T ss_dssp HHHHHHTTCT
T ss_pred HHHHHHHhCC
Confidence 4578877763
No 69
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=3.7e-40 Score=341.39 Aligned_cols=299 Identities=17% Similarity=0.167 Sum_probs=222.6
Q ss_pred CceeeEEEEEEEe--------cCCC----------CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCcccccc
Q 011677 44 PSVITKIKARQIL--------DSRG----------IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNS 105 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----------~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~ 105 (479)
+|+|++|+.+.+. .+.+ +++++|+|+|++|++ |+||+.. + .+.++
T Consensus 12 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~----------G~GE~~~-~-----~~~~~- 74 (393)
T 2og9_A 12 SDRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQ----------GLGFSYS-K-----RAGGP- 74 (393)
T ss_dssp CCCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCE----------EEEEEEE-E-----STTHH-
T ss_pred CCeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCE----------EEEEecC-c-----ccchH-
Confidence 4799999998883 2222 357999999999984 9999832 1 12222
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCc
Q 011677 106 VNRAVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNL 185 (479)
Q Consensus 106 ~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~ 185 (479)
.....++ .++|.|+|+||.+++.+|+.|.+.......+++..+|++|||+||||+.||..|+|||++||| .
T Consensus 75 --~~~~~i~-~l~~~l~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llGg---~--- 145 (393)
T 2og9_A 75 --GQFAHAR-EIAPALIGEDPSDIAKLWDKLCWAGASAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLGS---Y--- 145 (393)
T ss_dssp --HHHHHHH-HHGGGGTTSCTTCHHHHHHHHHHTTGGGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHCC---S---
T ss_pred --HHHHHHH-HHHHHHcCCChhhHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C---
Confidence 2222344 599999999999999999999875432222446789999999999999999999999999998 2
Q ss_pred ccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHH
Q 011677 186 TLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREG 265 (479)
Q Consensus 186 ~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~ 265 (479)
+.++|+|+++ ||.+. .+.++ ..+++.+...++|+.+| .|.| . .+.+.+.+.
T Consensus 146 ~~~vp~y~~~-g~~~~---~~~e~---------~~~~a~~~~~~Gf~~vK----ik~g-------~-----~~~~~~~e~ 196 (393)
T 2og9_A 146 RDSVRCYNTS-GGFLH---TPIDQ---------LMVNASASIERGIGGIK----LKVG-------Q-----PDGALDIAR 196 (393)
T ss_dssp CSEEEEEBCT-TCCTT---SCHHH---------HHHHHHHHHHTTCCCEE----EECC-------C-----SCHHHHHHH
T ss_pred CCceEEEEEC-CCcCC---CCHHH---------HHHHHHHHHHcCCCEEE----EecC-------C-----CCHHHHHHH
Confidence 3356667654 23211 12222 23444444444555554 3322 1 123345666
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+++ |.+ ..| +|+| +.||.+++++++. .+++|++.|||||++++|++
T Consensus 197 v~avR~av---g~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~~~ 248 (393)
T 2og9_A 197 VTAVRKHL---GDA-VPLMVDAN-----------------------QQWDRPTAQRMCR-IFEPFNLVWIEEPLDAYDHE 248 (393)
T ss_dssp HHHHHHHH---CTT-SCEEEECT-----------------------TCCCHHHHHHHHH-HHGGGCCSCEECCSCTTCHH
T ss_pred HHHHHHHc---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHhhCCCEEECCCCcccHH
Confidence 66676666 644 456 8883 3578899998865 48999999999999999999
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET 423 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get 423 (479)
++++|++++ +||++||+.. ++++++++++.+++|+| ++|++++||||++++++++|+++|++++ +|++++
T Consensus 249 ~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~gi~~~-~h~~~~- 319 (393)
T 2og9_A 249 GHAALALQFDTPIATGEMLT-SAAEHGDLIRHRAADYL------MPDAPRVGGITPFLKIASLAEHAGLMLA-PHFAME- 319 (393)
T ss_dssp HHHHHHHHCSSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCCHHHHTSHHHHHHHHHHHHHTTCEEC-CCSCHH-
T ss_pred HHHHHHHhCCCCEEeCCCcC-CHHHHHHHHHCCCCCEE------eeCccccCCHHHHHHHHHHHHHcCCEEe-ccCccH-
Confidence 999999999 9999999864 69999999999999999 9999999999999999999999999975 576654
Q ss_pred chhHHHHhHhhcCC
Q 011677 424 EDSFIADLSVGLAS 437 (479)
Q Consensus 424 ~d~~~~dlAv~~~~ 437 (479)
+.+|||+++..
T Consensus 320 ---~~~~laaa~~~ 330 (393)
T 2og9_A 320 ---LHVHLAAAYPR 330 (393)
T ss_dssp ---HHHHHHHTSSS
T ss_pred ---HHHHHHhhCCC
Confidence 47899988754
No 70
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=2.1e-40 Score=343.11 Aligned_cols=309 Identities=16% Similarity=0.127 Sum_probs=216.9
Q ss_pred CceeeEEEEEEEecC---CCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHH------
Q 011677 44 PSVITKIKARQILDS---RGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNIN------ 114 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds---~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~------ 114 (479)
+|+|++|+++.+.-. ..+.++.|+|+|++|++ |+||+... .......++
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~~~~V~v~td~G~~----------G~GE~~~~------------~~~~~~~~~~~~~~~ 61 (394)
T 3mqt_A 4 GANIVSVEFIPVNVAATNWSENTVIVKVTDENGVY----------GLGEADGP------------PECMKAFSEIENEHK 61 (394)
T ss_dssp -CCEEEEEEEEEECC-----CEEEEEEEEETTSCE----------EEEEECSC------------HHHHHHHHTCCCCBT
T ss_pred CCeEeEEEEEEEecCCCCCCccEEEEEEEECCCCE----------EEEEECCc------------HHHHHHHHhcccchh
Confidence 479999999998432 24567999999999994 99997531 111112222
Q ss_pred --HHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 115 --ERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 115 --~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+.++|.|+|+||.+.+++|+.|.+.......++...+|++|||+||||+.||.+|+|||++||| ..+.++| .|
T Consensus 62 ~~~~l~p~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~--~y 136 (394)
T 3mqt_A 62 WLNNIKEAVIGRDPLEFRANYNRMYDTTKWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMGG---AQKAQLT--PY 136 (394)
T ss_dssp TBCCGGGGTTTSCTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CCSSSBC--CE
T ss_pred hHHHHHHHhCCCChhHHHHHHHHHHHhhhhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCC---CCCCeEE--EE
Confidence 2389999999999999999999864211112335578999999999999999999999999998 3344554 46
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHh-hhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAE-KYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~-K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++... +...+.++. + ....+++.+...++|+++| . |.| .. ..+.+++.+.++.||+
T Consensus 137 ~s~~~~~--~~~~~~~~~-i----~~~~~~a~~~~~~G~~~~K----~~k~g-------~~---~~~~~~d~~~v~avR~ 195 (394)
T 3mqt_A 137 FTLYPSV--AADATLSEI-V----EAYKPLIAKAKERGAKAVK----VCIIP-------ND---KVSDKEIVAYLRELRE 195 (394)
T ss_dssp EECCCCC--CTTCCHHHH-H----HHHHHHHHHHHHTTCSEEE----EECCC-------CT---TSCHHHHHHHHHHHHH
T ss_pred EEecCCC--CCCcchhhh-H----HHHHHHHHHHHHcCCCEEE----ecccC-------CC---ccCHHHHHHHHHHHHH
Confidence 5432101 000000000 0 0011223333334444443 3 322 10 0122344566666666
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCC-CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFK-SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~-t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
++ |.+ ..+ +|+| +.| |.++++++. +.++++++.|||||++++|++++++|
T Consensus 196 a~---G~d-~~l~vDan-----------------------~~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~~~~~~~~l 247 (394)
T 3mqt_A 196 VI---GWD-MDMMVDCL-----------------------YRWTDWQKARWTF-RQLEDIDLYFIEACLQHDDLIGHQKL 247 (394)
T ss_dssp HH---CSS-SEEEEECT-----------------------TCCSCHHHHHHHH-HHTGGGCCSEEESCSCTTCHHHHHHH
T ss_pred Hh---CCC-CeEEEECC-----------------------CCCCCHHHHHHHH-HHHhhcCCeEEECCCCcccHHHHHHH
Confidence 65 644 355 8883 367 889999875 55899999999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--h
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--S 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~ 426 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++ .|+. ++.. +
T Consensus 248 ~~~~~iPIa~dE~~~-~~~~~~~~l~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~~-~s~i~~a 318 (394)
T 3mqt_A 248 AAAINTRLCGAEMST-TRFEAQEWLEKTGISVV------QSDYNRCGGVTELLRIMDICEHHNAQLM-PHNW-KTGITAA 318 (394)
T ss_dssp HHHSSSEEEECTTCC-HHHHHHHHHHHHCCSEE------CCCTTTSSCHHHHHHHHHHHHHHTCEEC-CCCC-SCHHHHH
T ss_pred HhhCCCCEEeCCCcC-CHHHHHHHHHcCCCCeE------ecCccccCCHHHHHHHHHHHHHcCCEEe-ccCC-CchHHHH
Confidence 9999 9999999865 59999999999999999 9999999999999999999999999986 5655 6654 4
Q ss_pred HHHHhHhhcCC
Q 011677 427 FIADLSVGLAS 437 (479)
Q Consensus 427 ~~~dlAv~~~~ 437 (479)
+.+||+.++..
T Consensus 319 a~~hlaaa~p~ 329 (394)
T 3mqt_A 319 AARHFGIVCHI 329 (394)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 56777766643
No 71
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=2.2e-40 Score=340.09 Aligned_cols=294 Identities=21% Similarity=0.216 Sum_probs=223.2
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.| +..+.|+|+|++|++ |+||+.++ +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~~ 65 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHI----------GYGECSPF-----MTIHGESMDTAFIV 65 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCE----------EEEEECCC-----HHHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCE----------EEeeccCC-----CCcCCCCHHHHHHH
Confidence 689999988772 2332 356899999999994 99998764 24567777777766
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccc-ccce
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTL-PVPA 191 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~-Pvp~ 191 (479)
+ +.++|.|+|+||.+.+++|+.|.+... + . ..|++|||+||||+.||..|+|||++||| . +.++ |+
T Consensus 66 ~-~~l~~~l~G~d~~~~~~~~~~l~~~~~-~---~--~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~-~~~v~~~-- 132 (368)
T 3q45_A 66 G-QYLAKGLIGTSCLDIVSNSLLMDAIIY-G---N--SCIKSAFNIALYDLAAQHAGLPLYAFLGG---K-KDKIIQT-- 132 (368)
T ss_dssp H-HHHHHHHTTSBTTCHHHHHHHHHHHCS-C---C--HHHHHHHHHHHHHHHHHHHTSBHHHHTTC---C-CCSCEEB--
T ss_pred H-HHHHHHhcCCChhhHHHHHHHHHHHhc-C---C--HHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCeeeee--
Confidence 6 479999999999999999999976321 1 1 47999999999999999999999999998 3 2344 43
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
+..++.+ + .+...+++.+...++|+.+| .|.|. +.+.+.+.++.||+
T Consensus 133 ~~~~~~~-------~---------~e~~~~~a~~~~~~G~~~~K----~KvG~-------------~~~~d~~~v~avR~ 179 (368)
T 3q45_A 133 DYTVSID-------E---------PHKMAADAVQIKKNGFEIIK----VKVGG-------------SKELDVERIRMIRE 179 (368)
T ss_dssp CEEECSC-------C---------HHHHHHHHHHHHHTTCSEEE----EECCS-------------CHHHHHHHHHHHHH
T ss_pred EEEecCC-------C---------HHHHHHHHHHHHHcCCCeEE----EEecC-------------CHHHHHHHHHHHHH
Confidence 3222211 0 11233444444445565554 45331 12345666666666
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|+
T Consensus 180 ~~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~~~~~~~~l~ 231 (368)
T 3q45_A 180 AA---GDS-ITLRIDAN-----------------------QGWSVETAIETL-TLLEPYNIQHCEEPVSRNLYTALPKIR 231 (368)
T ss_dssp HH---CSS-SEEEEECT-----------------------TCBCHHHHHHHH-HHHGGGCCSCEECCBCGGGGGGHHHHH
T ss_pred Hh---CCC-CeEEEECC-----------------------CCCChHHHHHHH-HHHhhcCCCEEECCCChhHHHHHHHHH
Confidence 66 644 356 8883 367889999875 457999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SF 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~ 427 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+.. ++
T Consensus 232 ~~~~iPIa~dE~~-~~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~es~i~~aa 303 (368)
T 3q45_A 232 QACRIPIMADESC-CNSFDAERLIQIQACDSF------NLKLSKSAGITNALNIIRLAEQAHMPVQVGGF-LESRLGFTA 303 (368)
T ss_dssp HTCSSCEEESTTC-CSHHHHHHHHHTTCCSEE------EECTTTTTSHHHHHHHHHHHHHTTCCEEECCS-SCCHHHHHH
T ss_pred hhCCCCEEEcCCc-CCHHHHHHHHHcCCCCeE------EechhhcCCHHHHHHHHHHHHHcCCcEEecCc-cccHHHHHH
Confidence 999 999999976 569999999999999999 99999999999999999999999999988665 46655 45
Q ss_pred HHHhHhhc
Q 011677 428 IADLSVGL 435 (479)
Q Consensus 428 ~~dlAv~~ 435 (479)
.+|||.++
T Consensus 304 ~~hlaaa~ 311 (368)
T 3q45_A 304 AAHVALVS 311 (368)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHcC
Confidence 56666554
No 72
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=5e-40 Score=341.76 Aligned_cols=324 Identities=15% Similarity=0.122 Sum_probs=218.0
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|++..+- .++..+.|+|+|++|++ |+||+. |++ ..+...|.+.++|.|+|
T Consensus 3 ~mkIt~v~~~~~~--~~~~~~~V~v~td~G~~----------G~GE~~---------~~~---~~~~~~i~~~l~p~liG 58 (410)
T 3dip_A 3 LPRITALRTIRLP--ERPKLIWVEVETEDGLT----------GLGETF---------RGA---QAVEAVLHEQTAPAIIG 58 (410)
T ss_dssp CCBEEEEEEEEET--TEEEEEEEEEEETTSCE----------EEEEEE---------SCH---HHHHHHHHHTHHHHHTT
T ss_pred CCeEEEEEEEEEC--CCCCEEEEEEEECCCCE----------EEEeCC---------CCh---HHHHHHHHHHHHHHhcC
Confidence 4799999998772 24567999999999994 999932 222 34455677779999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCc-cCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGK-HAG 202 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~-~~~ 202 (479)
+||.+.+++|+.|.+.......+....+|++|||+||||+.||.+|+|||+|||| ..+.++|+..+....+|. +..
T Consensus 59 ~dp~~~e~~~~~~~~~~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~yas~~~~~g~~~~~ 135 (410)
T 3dip_A 59 RAAENITSISSELLNPYVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALGG---AARDRVPVYATCAGYDFNTSLG 135 (410)
T ss_dssp SBTTCHHHHHHHHTCCSSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSEEEEEEEECTTTC-----
T ss_pred CCcchHHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCC---CcCCceeEEEeccccccccccc
Confidence 9999999999999752111222345578999999999999999999999999998 344566654321111121 000
Q ss_pred Ccc------cccceeeccC--CCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCC--CCCchHHHHHHHHHH
Q 011677 203 NNL------AIQDIMILPI--GASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAP--NISSIREGLDLVKEA 272 (479)
Q Consensus 203 ~~l------~~~e~~i~p~--~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~--~~~~~~~~l~~v~~a 272 (479)
..+ +.+.-+--|. .....+.+.+...++|+++|.. ++|....++| ...+ +++.+.+.++.||++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~---~~~~~~~K~G---~~~~~~~~~~d~e~v~avR~a 209 (410)
T 3dip_A 136 GRRSIGSAELSTGPYDDQVAFMRDAGVLAESLVAEGYAAMKIW---PFDDFASITP---HHISLTDLKDGLEPFRKIRAA 209 (410)
T ss_dssp -----------------------CHHHHHHHHHHTTCSEEEEC---TTHHHHTTCT---TCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhhHHHHHHHHHHcCCCEEEEC---CccCcccccc---CcCCHHHHHHHHHHHHHHHHH
Confidence 000 0000000000 0001122223333445554410 0000000122 1111 122345556666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecC-CCccCHHHHHHHH
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDP-FDKEDWEHTKSVL 350 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP-~~~~D~~g~~~L~ 350 (479)
+ |.+ ..| +|+| +.||.++++++. +.++++++.||||| ++++|++++++|+
T Consensus 210 ~---g~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEqP~~~~~~~~~~~~l~ 261 (410)
T 3dip_A 210 V---GQR-IEIMCELH-----------------------SLWGTHAAARIC-NALADYGVLWVEDPIAKMDNIPAVADLR 261 (410)
T ss_dssp H---TTS-SEEEEECT-----------------------TCBCHHHHHHHH-HHGGGGTCSEEECCBSCTTCHHHHHHHH
T ss_pred c---CCC-ceEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCCcccHHHHHHHH
Confidence 5 644 356 8883 367899999875 56899999999999 8999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA 429 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~ 429 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |.++....++.+
T Consensus 262 ~~~~iPIa~dE~~-~~~~~~~~~l~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~s~i~~aa~~ 333 (410)
T 3dip_A 262 RQTRAPICGGENL-AGTRRFHEMLCADAIDFV------MLDLTWCGGLSEGRKIAALAETHARPLAP-HXTGPVALMAGL 333 (410)
T ss_dssp HHHCCCEEECTTC-CSHHHHHHHHHTTCCSEE------EECTTTSSCHHHHHHHHHHHHHTTCCEEE-CSSCHHHHHHHH
T ss_pred hhCCCCEEecCCc-CCHHHHHHHHHcCCCCeE------eecccccCCHHHHHHHHHHHHHcCCEEee-eCccHHHHHHHH
Confidence 999 999999986 569999999999999999 99999999999999999999999999865 544222345677
Q ss_pred HhHhhcC
Q 011677 430 DLSVGLA 436 (479)
Q Consensus 430 dlAv~~~ 436 (479)
|||.++.
T Consensus 334 hlaaa~p 340 (410)
T 3dip_A 334 HLALHAP 340 (410)
T ss_dssp HHHHHCT
T ss_pred HHHHhCC
Confidence 7777764
No 73
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=2.8e-40 Score=341.68 Aligned_cols=299 Identities=15% Similarity=0.123 Sum_probs=220.0
Q ss_pred CceeeEEEEEEEecC----------C----CCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHH
Q 011677 44 PSVITKIKARQILDS----------R----GIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRA 109 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds----------~----g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~a 109 (479)
||+|++|+.+.+--. . .++.+.|+|+|++|+ +|+||+.. +.+..+ +.
T Consensus 2 ~MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~----------~G~GE~~~------~~~~~~---~~ 62 (389)
T 3ozy_A 2 SLKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGV----------TGVGSPSG------PYDLAV---LK 62 (389)
T ss_dssp CCCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSC----------CEEECCCS------SSCHHH---HH
T ss_pred CCEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCC----------EEEEecCC------CCCchH---HH
Confidence 689999999988422 1 135789999999998 59999762 122333 33
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHhh---hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcc
Q 011677 110 VKNINERISEALVGMDPILQSQIDQAMIDL---DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLT 186 (479)
Q Consensus 110 v~~i~~~l~p~LiG~d~~~~~~id~~l~~~---~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~ 186 (479)
...++ .++|.|+|+||.+.+++|+.|.+. .+.+ .+....+|++|||+||||+.||.+|+|||++||| ..+.+
T Consensus 63 ~~~i~-~l~p~l~G~d~~~~~~~~~~l~~~~~~~~~g-~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLGg---~~r~~ 137 (389)
T 3ozy_A 63 RAIED-VIGPQLIGEDPANINYLWHKVFHGEVSRNLG-HRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLGG---KFHTR 137 (389)
T ss_dssp HHHHH-TTHHHHTTSCTTCHHHHHHHHHHHTHHHHHC-SBSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTS---CSSTT
T ss_pred HHHHH-HHHHHHcCCCcchHHHHHHHHHhhhhhhccC-CchHHHHHHHHHHHHHHHHhHhHcCCCHHHHhCC---cccCC
Confidence 33454 499999999999999999999763 2211 1234578999999999999999999999999998 32344
Q ss_pred -cccceEEeecC-CccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHH
Q 011677 187 -LPVPAFTVISG-GKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIRE 264 (479)
Q Consensus 187 -~Pvp~~~~i~G-G~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~ 264 (479)
+| +|+.+.| +. +. +...+++.+...++|+.+| .|.| . +.+.+.+
T Consensus 138 ~v~--~y~~~~~~~~------~~---------e~~~~~a~~~~~~G~~~iK----iKvG----------~---~~~~d~~ 183 (389)
T 3ozy_A 138 GVR--AYASSIYWDL------TP---------DQAADELAGWVEQGFTAAK----LKVG----------R---APRKDAA 183 (389)
T ss_dssp CEE--EEEEEECSSC------CH---------HHHHHHHHHHHHTTCSEEE----EECC----------S---CHHHHHH
T ss_pred cee--eEEecCCCCC------CH---------HHHHHHHHHHHHCCCCEEe----eccC----------C---CHHHHHH
Confidence 44 4654422 10 11 1123333333344555544 3433 1 2344566
Q ss_pred HHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCH
Q 011677 265 GLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDW 343 (479)
Q Consensus 265 ~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~ 343 (479)
.++.||+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|+
T Consensus 184 ~v~avR~a~---g~d-~~l~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~iEqP~~~~d~ 235 (389)
T 3ozy_A 184 NLRAMRQRV---GAD-VEILVDAN-----------------------QSLGRHDALAML-RILDEAGCYWFEEPLSIDDI 235 (389)
T ss_dssp HHHHHHHHH---CTT-SEEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCSEEESCSCTTCH
T ss_pred HHHHHHHHc---CCC-ceEEEECC-----------------------CCcCHHHHHHHH-HHHHhcCCCEEECCCCcccH
Confidence 666666666 644 455 8883 367889999875 55899999999999999999
Q ss_pred HHHHHHH-hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCC
Q 011677 344 EHTKSVL-QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSG 421 (479)
Q Consensus 344 ~g~~~L~-~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~g 421 (479)
+++++|+ +++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+.
T Consensus 236 ~~~~~l~~~~~~iPIa~dE~i~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~ia~~A~~~gi~~~~-h~~- 306 (389)
T 3ozy_A 236 EGHRILRAQGTPVRIATGENLY-TRNAFNDYIRNDAIDVL------QADASRAGGITEALAISASAASAHLAWNP-HTF- 306 (389)
T ss_dssp HHHHHHHTTCCSSEEEECTTCC-HHHHHHHHHHTTCCSEE------CCCTTTSSCHHHHHHHHHHHHHTTCEECC-CCT-
T ss_pred HHHHHHHhcCCCCCEEeCCCCC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEe-cCC-
Confidence 9999999 999 9999999865 59999999999999999 99999999999999999999999999865 544
Q ss_pred CCch--hHHHHhHhhcCC
Q 011677 422 ETED--SFIADLSVGLAS 437 (479)
Q Consensus 422 et~d--~~~~dlAv~~~~ 437 (479)
++.. ++.+|||.++..
T Consensus 307 ~~~i~~aa~~hlaaa~~~ 324 (389)
T 3ozy_A 307 NDIITVAANLHLVAASPH 324 (389)
T ss_dssp TSHHHHHHHHHHHHHCCS
T ss_pred CcHHHHHHHHHHHHhCCC
Confidence 5544 466777777644
No 74
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=1.1e-40 Score=343.50 Aligned_cols=292 Identities=17% Similarity=0.138 Sum_probs=223.3
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+|++|+.+.+. .+.+ ++++.|+|+|+ |++ |+||+...+. +.|.++++.++..
T Consensus 7 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~~----------G~GE~~~~~~---~~~~~e~~~~~~~ 72 (375)
T 1r0m_A 7 MFKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHGE-GVQ----------GVAEGTMEAR---PMYREETIAGALD 72 (375)
T ss_dssp CEECCEEEEEEEEEEBC----------CEEEEEEEEEEET-TEE----------EEEECCCBSS---SSSSSCBHHHHHH
T ss_pred ccEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEEC-CeE----------EEEEEecCCC---CcccCCCHHHHHH
Confidence 6899999998883 1222 35799999995 984 9999876432 4688899998988
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+++.++|.|+|+|+.+++++|+.|..+. + +.+|++|||+||||+.||..|+|||++||| . +.++|++
T Consensus 73 ~i~~~l~~~l~g~d~~~~~~l~~~~~~~~-----g--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~~~~~- 140 (375)
T 1r0m_A 73 LLRGTFLPAILGQTFANPEAVSDALGSYR-----G--NRMARAMVEMAAWDLWARTLGVPLGTLLGG---H-KEQVEVG- 140 (375)
T ss_dssp HHHHTHHHHHTTCEESSHHHHHHTTTTSC-----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHTC---C-CSEEEBC-
T ss_pred HHHHHHHHHHcCCCcCCHHHHHHHHHHcc-----C--chHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceeee-
Confidence 89888999999999999999988764332 1 257999999999999999999999999998 3 2355665
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
|++ |.+. +.++ ..+++.+...++|+.+| .| ++ + +.+.+.++.||+
T Consensus 141 ~~~---g~~~----~~~~---------~~~~a~~~~~~G~~~iK----ik-------~~------~--~~d~~~v~avr~ 185 (375)
T 1r0m_A 141 VSL---GIQA----DEQA---------TVDLVRRHVEQGYRRIK----LK-------IK------P--GWDVQPVRATRE 185 (375)
T ss_dssp EEE---CCCS----SHHH---------HHHHHHHHHHTTCSCEE----EE-------CB------T--TBSHHHHHHHHH
T ss_pred EEe---cCCC----CHHH---------HHHHHHHHHHhcccEEE----Ee-------cC------h--HHHHHHHHHHHH
Confidence 442 2210 1221 23444444445555544 23 11 2 234677777776
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ .+ ..+ +|+| +.||.++ ++++. .+++|++.|||||++++|+++|++|+
T Consensus 186 a~----~~-~~l~vDan-----------------------~~~~~~~-~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~l~ 235 (375)
T 1r0m_A 186 AF----PD-IRLTVDAN-----------------------SAYTLAD-AGRLR-QLDEYDLTYIEQPLAWDDLVDHAELA 235 (375)
T ss_dssp HC----TT-SCEEEECT-----------------------TCCCGGG-HHHHH-TTGGGCCSCEECCSCTTCSHHHHHHH
T ss_pred Hc----CC-CeEEEeCC-----------------------CCCCHHH-HHHHH-HHHhCCCcEEECCCCcccHHHHHHHH
Confidence 65 12 346 9983 2457778 87754 58999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhH--
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSF-- 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~-- 427 (479)
+++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++|++|+. |+..+.
T Consensus 236 ~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~-es~i~~aa 307 (375)
T 1r0m_A 236 RRIRTPLCLDESV-ASASDARKALALGAGGVI------NLKVARVGGHAESRRVHDVAQSFGAPVWCGGML-ESGIGRAH 307 (375)
T ss_dssp HHCSSCEEESTTC-CSHHHHHHHHHHTSCSEE------EECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC-CCHHHHHH
T ss_pred HhCCCCEEecCcc-CCHHHHHHHHHhCCCCEE------EECcchhcCHHHHHHHHHHHHHcCCcEEecCcc-ccHHHHHH
Confidence 999 999999986 669999999999999999 999999999999999999999999999999986 665554
Q ss_pred HHHhHhhc
Q 011677 428 IADLSVGL 435 (479)
Q Consensus 428 ~~dlAv~~ 435 (479)
.+||| ++
T Consensus 308 ~~hla-a~ 314 (375)
T 1r0m_A 308 NIHLS-TL 314 (375)
T ss_dssp HHHHT-TS
T ss_pred HHHHH-cC
Confidence 56666 44
No 75
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=4.3e-40 Score=340.36 Aligned_cols=298 Identities=15% Similarity=0.107 Sum_probs=222.3
Q ss_pred CceeeEEEEEEEec--------CCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCcc-ccccHHHHH
Q 011677 44 PSVITKIKARQILD--------SRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTY-LGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~d--------s~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y-~g~~~~~av 110 (479)
||+|++|+.+.+.- +.+ .+.+.|+|+|++|++ |+||+... .+ .+.+...
T Consensus 9 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~------~~~~~~~~~~-- 70 (392)
T 3ddm_A 9 SITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAV----------GWGEVWCN------FPACGAEHRA-- 70 (392)
T ss_dssp CBCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCE----------EEEECCCC------SSTTHHHHHH--
T ss_pred CCEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCE----------EEEEeccC------CCCCchHHHH--
Confidence 78999999998832 222 357899999999984 99998531 11 1112222
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhh----hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDL----DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLT 186 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~----~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~ 186 (479)
..|++.++|.|+|+||.+.+++|+.|.+. ....+..+...+|++|||+||||+.||.+|+|||++||| .. .+
T Consensus 71 ~~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~-~~ 146 (392)
T 3ddm_A 71 RLVETVLAPLLTARAFADPAQAFAHLEARTAVLAIQTGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLGG---SG-DR 146 (392)
T ss_dssp HHHHHTHHHHHTTSCBSSHHHHHHHHHHTTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTC---SC-CE
T ss_pred HHHHHHHHHHhCCCCcCCHHHHHHHHHhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCC---CC-Cc
Confidence 24567899999999999999999999764 100111124468999999999999999999999999998 32 45
Q ss_pred cccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHH
Q 011677 187 LPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGL 266 (479)
Q Consensus 187 ~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l 266 (479)
+| +|++ |. . | +...+++.+...++|+.+| .|.|. +.+.+.+.+
T Consensus 147 v~--~y~~--g~-------~-------~--e~~~~~a~~~~~~G~~~iK----lK~g~-------------~~~~d~~~v 189 (392)
T 3ddm_A 147 IG--VYAS--GI-------N-------P--ENPEDVVARKAAEGYRAFK----LKVGF-------------DDARDVRNA 189 (392)
T ss_dssp EE--EEEE--EE-------C-------S--SSHHHHHHHHHHHTCCCEE----EECSS-------------CHHHHHHHH
T ss_pred ee--EEee--cC-------C-------H--HHHHHHHHHHHHcCCCEEE----EecCC-------------CHHHHHHHH
Confidence 44 4654 21 1 1 2334555555556676665 45331 223456666
Q ss_pred HHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccC-HH
Q 011677 267 DLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKED-WE 344 (479)
Q Consensus 267 ~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D-~~ 344 (479)
+.||+++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++| ++
T Consensus 190 ~avR~a~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~d~~~ 241 (392)
T 3ddm_A 190 LHVRELL---GAA-TPLMADAN-----------------------QGWDLPRARQMA-QRLGPAQLDWLEEPLRADRPAA 241 (392)
T ss_dssp HHHHHHH---CSS-SCEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTSCHH
T ss_pred HHHHHhc---CCC-ceEEEeCC-----------------------CCCCHHHHHHHH-HHHHHhCCCEEECCCCccchHH
Confidence 6666666 644 456 8883 367889999875 5689999999999999999 99
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET 423 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get 423 (479)
++++|++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++ ++|+. ++
T Consensus 242 ~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~-~~h~~-~~ 312 (392)
T 3ddm_A 242 EWAELAQAAPMPLAGGENI-AGVAAFETALAARSLRVM------QPDLAKWGGFSGCLPVARAVVAAGLRY-CPHYL-GA 312 (392)
T ss_dssp HHHHHHHHCSSCEEECTTC-CSHHHHHHHHHHTCEEEE------CCCTTTTTHHHHHHHHHHHHHHTTCEE-CCEEC-SC
T ss_pred HHHHHHHhcCCCEEeCCCC-CCHHHHHHHHHcCCCCEE------EeCcchhCCHHHHHHHHHHHHHcCCEE-EecCC-ch
Confidence 999999999 999999986 569999999999999999 999999999999999999999999998 57864 55
Q ss_pred ch--hHHHHhHhhcCC
Q 011677 424 ED--SFIADLSVGLAS 437 (479)
Q Consensus 424 ~d--~~~~dlAv~~~~ 437 (479)
.. ++.+||+.++..
T Consensus 313 ~i~~aa~~hl~aa~p~ 328 (392)
T 3ddm_A 313 GIGLQASAHLLAAVPG 328 (392)
T ss_dssp HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 44 466777777644
No 76
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=2.4e-41 Score=349.74 Aligned_cols=300 Identities=16% Similarity=0.159 Sum_probs=222.3
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. ++.| ...+.|+|+|++|++ |+||+.++ +.|.+++...+..
T Consensus 26 ~mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~ 90 (393)
T 3u9i_A 26 PTTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTR----------GYGEAAPF-----PAFNGETQDMAHA 90 (393)
T ss_dssp TTBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCE----------EEEEECCC-----HHHHSCCHHHHHH
T ss_pred CcEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCE----------EEEEeeCC-----CCcCcCCHHHHHH
Confidence 4799999999883 2222 357899999999984 99998765 3467788887777
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.++ .++|.|+|+||.+.+++|+.|.+... ...+|++|||+||||+.||..|+|||++||| .. .++|+
T Consensus 91 ~l~-~l~p~l~G~d~~~~~~~~~~l~~~~~------~~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~-~~v~~-- 157 (393)
T 3u9i_A 91 AIL-AARSLVEGADVREWRRIALALPALPG------MTGSARCAIETAILDALTRRARLPLWAFFGG---AA-TSLET-- 157 (393)
T ss_dssp HHH-HTHHHHTTSBGGGHHHHHHHGGGSTT------CCHHHHHHHHHHHHHHHHHHTTCBHHHHTTC---SC-SEEEC--
T ss_pred HHH-HHHHHhcCCCcCCHHHHHHHHHHhcC------ccHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CC-CceEE--
Confidence 774 69999999999999999998865321 1257999999999999999999999999998 32 45554
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCC---CCchHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPN---ISSIREGLDL 268 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~---~~~~~~~l~~ 268 (479)
+..++.+ ..+...+++.+...++|+.+| .|.|.. ...... .+++.++++.
T Consensus 158 ~~t~~~~----------------~~e~~~~~a~~~~~~Gf~~iK----lKvg~~-------~~~~~~~~~~~~di~~v~a 210 (393)
T 3u9i_A 158 DVTITTG----------------SVTAAARAAQAIVARGVTTIK----IKIGAG-------DPDATTIRTMEHDLARIVA 210 (393)
T ss_dssp CEEEC-------------------CHHHHHHHHHHHTTTCCEEE----EECC--------------CHHHHHHHHHHHHH
T ss_pred EEEecCC----------------CHHHHHHHHHHHHHcCCCeEE----EEeCCC-------cccccccccHHHHHHHHHH
Confidence 3332211 112234445555555666655 454421 000000 2234455555
Q ss_pred HHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH--hhCCceeeecCCCccCHHH
Q 011677 269 VKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC--ADYPIVSIEDPFDKEDWEH 345 (479)
Q Consensus 269 v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll--~~~~i~~iEdP~~~~D~~g 345 (479)
||+++ | + .++ +|+| +.||.++++++. +.+ ++|+|.|||||++++|+++
T Consensus 211 vR~a~---~-d-~~L~vDaN-----------------------~~w~~~~A~~~~-~~L~~~~~~i~~iEeP~~~~d~~~ 261 (393)
T 3u9i_A 211 IRDVA---P-T-ARLILDGN-----------------------CGYTAPDALRLL-DMLGVHGIVPALFEQPVAKDDEEG 261 (393)
T ss_dssp HHHHS---T-T-SEEEEECC-----------------------SCCCHHHHHHHH-HTTTTTTCCCSEEECCSCTTCTTH
T ss_pred HHHHC---C-C-CeEEEEcc-----------------------CCCCHHHHHHHH-HHHhhCCCCeEEEECCCCCCcHHH
Confidence 55554 3 2 356 9984 367899999875 558 8899999999999999999
Q ss_pred HHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCc
Q 011677 346 TKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETE 424 (479)
Q Consensus 346 ~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~ 424 (479)
+++|++++ +||++||+.. ++++++++++.+++|++ |+|+++ ||||++++++++|+++|++++++++ .|+.
T Consensus 262 ~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~a~d~i------~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~~-~es~ 332 (393)
T 3u9i_A 262 LRRLTATRRVPVAADESVA-SATDAARLARNAAVDVL------NIKLMK-CGIVEALDIAAIARTAGLHLMIGGM-VESL 332 (393)
T ss_dssp HHHHHHTCSSCEEESTTCC-SHHHHHHHHHTTCCSEE------EECHHH-HCHHHHHHHHHHHHHHTCEEEECCS-SCCH
T ss_pred HHHHHhhCCCcEEeCCcCC-CHHHHHHHHHcCCCCEE------Eecccc-cCHHHHHHHHHHHHHcCCeEEecCC-cccH
Confidence 99999999 9999999864 59999999999999999 999999 9999999999999999999877554 4654
Q ss_pred h--hHHHHhHhhcC
Q 011677 425 D--SFIADLSVGLA 436 (479)
Q Consensus 425 d--~~~~dlAv~~~ 436 (479)
. ++.+|||.++.
T Consensus 333 ig~aa~~hlaaa~p 346 (393)
T 3u9i_A 333 LAMTVSACFAAGQG 346 (393)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCC
Confidence 4 56677777654
No 77
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=1.9e-40 Score=344.75 Aligned_cols=302 Identities=18% Similarity=0.190 Sum_probs=219.6
Q ss_pred CceeeEEEEEEEe------------------------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeecc
Q 011677 44 PSVITKIKARQIL------------------------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRD 95 (479)
Q Consensus 44 ~~~I~~I~~~~i~------------------------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d 95 (479)
.|+|++|+++.+- ++++ +.++.|+|+|++|++ |+||+..
T Consensus 22 ~m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~----------G~GE~~~--- 88 (412)
T 3stp_A 22 SMKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTI----------GIGNAAL--- 88 (412)
T ss_dssp -CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCE----------EEEEECS---
T ss_pred ccEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCE----------EEEeccC---
Confidence 3699999997772 1221 336999999999994 9999743
Q ss_pred CCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHH
Q 011677 96 GDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKH 175 (479)
Q Consensus 96 ~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~l 175 (479)
.+ ..+...|++.++|.|+|+||.+.+++|+.|.+.....+.+++..+|++|||+||||+.||.+|+|||++
T Consensus 89 ------~~---~~~~~~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~~~g~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~L 159 (412)
T 3stp_A 89 ------AP---SVVKKVIDDWYAPLVIGEDPFDYAYIWEKMYRRSHAWGRKGIGMTAISAIDIAIWDLMGKLVGKPVFKL 159 (412)
T ss_dssp ------SH---HHHHHHHHHTTHHHHTTSCGGGHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHTTCBHHHH
T ss_pred ------CH---HHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCHHHh
Confidence 11 245556777799999999999999999999863211112235578999999999999999999999999
Q ss_pred HhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCC
Q 011677 176 IADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGL 255 (479)
Q Consensus 176 Lgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~ 255 (479)
||| ..+.++ |+|+... + .+ +. +...+++.+...++|+.+| .|.|..+. +|+
T Consensus 160 LGG---~~r~~v--~~y~s~~-~--~~---~~---------e~~~~~a~~~~~~Gf~~iK----ik~g~gp~----dg~- 210 (412)
T 3stp_A 160 LGG---RTKDRI--PVYYSKL-Y--AG---SI---------EAMQKEAEEAMKGGYKAFK----SRFGYGPK----DGM- 210 (412)
T ss_dssp HTC---CSSSSE--EEEEECC-C--SC---CH---------HHHHHHHHHHHTTTCSEEE----EECCCCGG----GHH-
T ss_pred cCC---CCCceE--EEEEEec-C--CC---CH---------HHHHHHHHHHHHcCCCEEE----EecccCcc----ccc-
Confidence 998 334454 4455310 1 00 11 1123344444444555544 45332100 011
Q ss_pred CCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceee
Q 011677 256 APNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSI 334 (479)
Q Consensus 256 ~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~i 334 (479)
..++.+.+.++.||+++ |.+ ..| +|+| +.||.++++++. +.++++++.||
T Consensus 211 -~~~~~die~v~avReav---G~d-~~L~vDaN-----------------------~~~~~~~Ai~~~-~~Le~~~i~~i 261 (412)
T 3stp_A 211 -PGMRENLKRVEAVREVI---GYD-NDLMLECY-----------------------MGWNLDYAKRML-PKLAPYEPRWL 261 (412)
T ss_dssp -HHHHHHHHHHHHHHHHH---CSS-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEE
T ss_pred -chHHHHHHHHHHHHHHc---CCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCCEE
Confidence 11223455566666655 644 456 8883 367899999875 55899999999
Q ss_pred ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCe
Q 011677 335 EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWG 413 (479)
Q Consensus 335 EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~ 413 (479)
|||++++|++++++|++++ +||++||+. .++++++++++.+++|+| ++|++++||||++++++++|+++|++
T Consensus 262 EeP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~li~~~a~D~v------~ik~~~~GGit~a~kia~~A~a~gi~ 334 (412)
T 3stp_A 262 EEPVIADDVAGYAELNAMNIVPISGGEHE-FSVIGCAELINRKAVSVL------QYDTNRVGGITAAQKINAIAEAAQIP 334 (412)
T ss_dssp ECCSCTTCHHHHHHHHHTCSSCEEECTTC-CSHHHHHHHHHTTCCSEE------CCCHHHHTHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCcccHHHHHHHHhCCCCCEEeCCCC-CCHHHHHHHHHcCCCCEE------ecChhhcCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999999999 999999986 459999999999999999 99999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHhHhhcCC
Q 011677 414 VVISHRSGETEDSFIADLSVGLAS 437 (479)
Q Consensus 414 ~~v~h~~get~d~~~~dlAv~~~~ 437 (479)
+++ |+ ..++.+||+.++.+
T Consensus 335 v~~-h~----~~aa~~hlaaA~~~ 353 (412)
T 3stp_A 335 VIP-HA----GQMHNYHLTMANTN 353 (412)
T ss_dssp BCC-SS----CSHHHHHHHHTCTT
T ss_pred EEe-cc----HHHHHHHHHHhCCC
Confidence 865 44 35678899877643
No 78
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=8.4e-41 Score=345.24 Aligned_cols=298 Identities=14% Similarity=0.142 Sum_probs=226.2
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.| +..+.|+|+|++|++ |+||+..+.. +.|.++++..+...
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~---p~~~~e~~~~~~~~ 67 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIE----------GWSECVALAE---PTYTEECTDTAWVM 67 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCE----------EEEEECCCSS---TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCE----------EEEecccCCC---CccccccHHHHHHH
Confidence 689999988873 3443 357999999999984 9999876432 56888898888888
Q ss_pred HHHHHHHhhc-------CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCc
Q 011677 113 INERISEALV-------GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNL 185 (479)
Q Consensus 113 i~~~l~p~Li-------G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~ 185 (479)
+++.++|.|+ |+++.+++++++.|..+.+ ...|++|||+||||+.||..|+|||++||| . +.
T Consensus 68 l~~~l~p~l~~~~~~~~G~~~~~~~~~~~~~~~~~g-------~~~A~said~ALwDl~gk~~g~Pl~~LLGg---~-r~ 136 (388)
T 3qld_A 68 LVHHLVPRFARWLRAASQDQDVDPRTVCEALRDVRG-------NRMSVAAIEMAVWDWYAARTGQPLVGLLGG---G-RD 136 (388)
T ss_dssp HHHTHHHHHHHHHTSGGGSSCCCGGGGGGGGTTCCS-------CHHHHHHHHHHHHHHHHHHHTCCHHHHTTC---C-CS
T ss_pred HHHHHHHHHhhhhcccCCCCccCHHHHHHHHHHccC-------cHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CC
Confidence 9888999999 9999999988887754321 257999999999999999999999999998 2 34
Q ss_pred ccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHH
Q 011677 186 TLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREG 265 (479)
Q Consensus 186 ~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~ 265 (479)
++|+ +..++.+ + ..+...+++.+...++|+.+| .|.| + +.+.+.
T Consensus 137 ~v~~--~~~~~~~-------~--------~~e~~~~~~~~~~~~G~~~~K----~Kv~-------------~--~~d~~~ 180 (388)
T 3qld_A 137 RVEV--SATLGMS-------E--------SLDVLIQSVDAAVEQGFRRVK----LKIA-------------P--GRDRAA 180 (388)
T ss_dssp EEEB--EEEECCC-------S--------CHHHHHHHHHHHHHTTCSEEE----EECB-------------T--TBSHHH
T ss_pred eEEE--eEEecCC-------C--------CHHHHHHHHHHHHHhCCCeEE----EEeC-------------c--HHHHHH
Confidence 5554 5443211 0 011123344444444555554 3422 1 234677
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+++. + .++ +|+| +.||.++++. + +.+++|+|.|||||++++|++
T Consensus 181 v~avR~~~~----~-~~l~vDaN-----------------------~~~~~~~A~~-~-~~l~~~~i~~iEeP~~~~d~~ 230 (388)
T 3qld_A 181 IKAVRLRYP----D-LAIAADAN-----------------------GSYRPEDAPV-L-RQLDAYDLQFIEQPLPEDDWF 230 (388)
T ss_dssp HHHHHHHCT----T-SEEEEECT-----------------------TCCCGGGHHH-H-HHGGGGCCSCEECCSCTTCHH
T ss_pred HHHHHHHCC----C-CeEEEECC-----------------------CCCChHHHHH-H-HHHhhCCCcEEECCCCcccHH
Confidence 877777662 2 345 9984 3567777774 4 558999999999999999999
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET 423 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get 423 (479)
++++|++++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|++++++|+ .|+
T Consensus 231 ~~~~l~~~~~ipIa~dE~~~-~~~~~~~~~~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es 302 (388)
T 3qld_A 231 DLAKLQASLRTPVCLDESVR-SVRELKLTARLGAARVL------NVKPGRLGGFGATLRALDVAGEAGMAAWVGGM-YET 302 (388)
T ss_dssp HHHHHHHHCSSCEEESTTCC-SHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-CCC
T ss_pred HHHHHHHhCCCCEEeCCCCC-CHHHHHHHHHcCCCCEE------EECchhhCCHHHHHHHHHHHHHCCCeEEecCc-cch
Confidence 999999999 9999999865 59999999999999999 99999999999999999999999999988765 477
Q ss_pred chhHHHHhHhhcCCCCc
Q 011677 424 EDSFIADLSVGLASGQI 440 (479)
Q Consensus 424 ~d~~~~dlAv~~~~~~i 440 (479)
..+..++++++....+.
T Consensus 303 ~i~~aa~~~laa~~~~~ 319 (388)
T 3qld_A 303 GVGRVHGLIAAALPLMR 319 (388)
T ss_dssp HHHHHHHHHHHTSTTBC
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 66666666665433433
No 79
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=3.3e-40 Score=342.97 Aligned_cols=271 Identities=15% Similarity=0.126 Sum_probs=208.4
Q ss_pred eEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhh-c
Q 011677 63 TVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLD-K 141 (479)
Q Consensus 63 ~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~-~ 141 (479)
+|+|+|+|++|++ |+||+.. + ..++..+++.|+|.|+|+||.++++||+.|.+.. +
T Consensus 71 ~v~V~v~td~G~~----------G~GE~~~----------g---~~~~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~~~~ 127 (415)
T 2p3z_A 71 TLIVEVEAENRQT----------GFAVSTA----------G---EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMY 127 (415)
T ss_dssp EEEEEEEETTSCE----------EEEEEEC----------H---HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCE----------EEEEecC----------C---HHHHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhhc
Confidence 6899999999984 9999742 1 2344457778999999999999999999998643 2
Q ss_pred cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHH
Q 011677 142 TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFG 221 (479)
Q Consensus 142 ~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ 221 (479)
+.++++++.+|++|||+||||+.||..|+|||+|||| ..+.+ +|+|++ |+ + .+
T Consensus 128 ~~g~~~~~~~A~said~ALwDl~ak~~g~Pl~~lLGG---~~~~~--vp~y~~--g~-------~-------------~~ 180 (415)
T 2p3z_A 128 YSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGG---AVRDE--IQFYAT--GA-------R-------------PD 180 (415)
T ss_dssp TSTTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSSSE--EEEEEE--SS-------C-------------HH
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHcCCcHHHHcCC---CCCCc--eeeeec--CC-------C-------------HH
Confidence 2244567789999999999999999999999999998 33344 455654 22 0 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeec
Q 011677 222 EALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDL 300 (479)
Q Consensus 222 ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~ 300 (479)
++++ ++|+.+| .|.| .+++|++. +++.+.++++.||+++ |.+ ..| +|+|
T Consensus 181 ~~~~---~G~~~~K----iK~g-----~g~~~G~~-~~~~d~~~v~avrea~---G~~-~~L~vDaN------------- 230 (415)
T 2p3z_A 181 LAKE---MGFIGGK----MPTH-----WGPHDGDA-GIRKDAAMVADMREKC---GPD-FWLMLDCW------------- 230 (415)
T ss_dssp HHHH---HTCSEEE----EECC-----CCGGGHHH-HHHHHHHHHHHHHHHH---CSS-SEEEEECT-------------
T ss_pred HHHH---hCcceEE----Eecc-----cCcccccc-cHHHHHHHHHHHHHHh---CCC-CEEEEECC-------------
Confidence 3332 3476665 3432 23333332 2233456666666665 654 456 9984
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh---hhhhcCCccccCHHHHHHHhcCCC
Q 011677 301 DFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC---QQVVGDDLLMSNPKRIERATLIPL 377 (479)
Q Consensus 301 ~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~---~~I~gde~~~t~~~~~~~~i~~~a 377 (479)
+.||.+++++++.+ +++|+|.|||||++++|+++|++|++++ +||++||++. ++++++++++.+
T Consensus 231 ----------~~~~~~~Ai~~~~~-l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE~~~-~~~~~~~~i~~~- 297 (415)
T 2p3z_A 231 ----------MSQDVNYATKLAHA-CAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHG-TLQSFRTLAETG- 297 (415)
T ss_dssp ----------TCCCHHHHHHHHHH-HGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTCC-SHHHHHHHHHTT-
T ss_pred ----------CCCCHHHHHHHHHH-HhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCCCCC-CHHHHHHHHHcC-
Confidence 35688999998765 8999999999999999999999999987 6999999875 599999999999
Q ss_pred CceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCC
Q 011677 378 AMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLAS 437 (479)
Q Consensus 378 ~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~ 437 (479)
+|++ +||++++||||++++++++|+++|+++|+ |++ ....+|||.++..
T Consensus 298 ~d~i------~ik~~~~GGitea~~ia~lA~~~gi~v~~-h~~----~~a~~hlaaa~p~ 346 (415)
T 2p3z_A 298 IDIM------QPDVGWCGGLTTLVEIAALAKSRGQLVVP-HGS----SVYSHHAVITFTN 346 (415)
T ss_dssp CSEE------CCCHHHHTCHHHHHHHHHHHHHTTCCBCC-CCC----HHHHHHHHTTCTT
T ss_pred CCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEe-cCh----HHHHHHHHHhCCC
Confidence 9999 99999999999999999999999999865 754 2356788877643
No 80
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=3.3e-40 Score=338.75 Aligned_cols=295 Identities=16% Similarity=0.160 Sum_probs=226.8
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ +..+.|+|+|++|++ |+||+.+. +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~~ 65 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIV----------GVAEAPPR-----PFTYGETQTGIVAV 65 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCE----------EEEEECCC-----TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCE----------EEEeccCC-----CCccCCCHHHHHHH
Confidence 689999998883 1222 357999999999994 99998653 45778888888888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
|++.++|.|+|+||.+.+++|+.|.+.. + ..+|++|||+||||+.||..|+|||++||| .+.++|+ +
T Consensus 66 i~~~l~~~l~G~d~~~~~~~~~~l~~~~-----~--~~~a~~aid~AlwDl~gk~~g~Pl~~llGg----~~~~v~~--~ 132 (367)
T 3dg3_A 66 IEQYFAPALIGLTLTEREVAHTRMARTV-----G--NPTAKAAIDMAMWDALGQSLRLSVSEMLGG----YTDRMRV--S 132 (367)
T ss_dssp HHHTHHHHHTTCBTTCHHHHHHHHTTSC-----S--CHHHHHHHHHHHHHHHHHHHTCBHHHHHTC----CCSEEEE--E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHhcc-----C--chHHHHHHHHHHHHHHHHHcCCcHHHHhCC----CCCeEEE--E
Confidence 8888999999999999999999987541 1 257999999999999999999999999998 2345544 5
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
..++.+ + .+...+++.+...+ +|+.+| .|.|. .+ .+.+.+.++.||+
T Consensus 133 ~~~~~~-------~---------~~~~~~~a~~~~~~~G~~~~K----~K~g~-----------~~-~~~d~~~v~avR~ 180 (367)
T 3dg3_A 133 HMLGFD-------D---------PVKMVAEAERIRETYGINTFK----VKVGR-----------RP-VQLDTAVVRALRE 180 (367)
T ss_dssp EEEESS-------C---------HHHHHHHHHHHHHHHCCCEEE----EECCC-----------SS-THHHHHHHHHHHH
T ss_pred EEecCC-------C---------HHHHHHHHHHHHHhcCccEEE----EeeCC-----------Ch-hhhHHHHHHHHHH
Confidence 443321 1 11234445455445 565555 45431 11 1145677777777
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|+
T Consensus 181 a~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~ 232 (367)
T 3dg3_A 181 RF---GDA-IELYVDGN-----------------------RGWSAAESLRAM-REMADLDLLFAEELCPADDVLSRRRLV 232 (367)
T ss_dssp HH---GGG-SEEEEECT-----------------------TCSCHHHHHHHH-HHTTTSCCSCEESCSCTTSHHHHHHHH
T ss_pred Hh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHHhCCCEEECCCCcccHHHHHHHH
Confidence 77 433 345 8883 367889999875 558999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SF 427 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~ 427 (479)
+++ +||++||+.. ++++++++++.+++|++ ++|++++ |||++++++++|+++|++++++|+ .|+.. ++
T Consensus 233 ~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~~k~~~~-Git~~~~ia~~A~~~gi~~~~~~~-~es~i~~aa 303 (367)
T 3dg3_A 233 GQLDMPFIADESVP-TPADVTREVLGGSATAI------SIKTART-GFTGSTRVHHLAEGLGLDMVMGNQ-IDGQIGTAC 303 (367)
T ss_dssp HHCSSCEEECTTCS-SHHHHHHHHHHTSCSEE------EECHHHH-TTHHHHHHHHHHHHHTCEEEECCS-SCCHHHHHH
T ss_pred HhCCCCEEecCCcC-CHHHHHHHHHcCCCCEE------Eeehhhh-hHHHHHHHHHHHHHcCCeEEECCc-CCcHHHHHH
Confidence 999 9999999864 59999999999999999 9999999 999999999999999999988765 45544 45
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+|||.++.
T Consensus 304 ~~hlaaa~~ 312 (367)
T 3dg3_A 304 TVSFGTAFE 312 (367)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHHhCC
Confidence 667766543
No 81
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=5.2e-41 Score=343.38 Aligned_cols=296 Identities=16% Similarity=0.158 Sum_probs=224.9
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ +..+.|+|+|++|++ |+||+.+. +.|.+++...+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~~ 65 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLL----------GLGAASPE-----RHVTGETLEACHAA 65 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCE----------EEEEECCC-----HHHHCCCHHHHHHH
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCE----------EEecccCC-----CCcCcCCHHHHHHH
Confidence 699999998873 2222 347999999999984 99998764 24567778888878
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+||.+.+++|+.|.+... + ...|++|||+||||+.||..|+|||++||| . +.++|+ +
T Consensus 66 l~~~l~~~l~G~~~~~~~~~~~~l~~~~~----~--~~~a~~aid~AlwDl~gk~~g~Pl~~llGg---~-~~~v~~--~ 133 (356)
T 3ro6_B 66 LDHDRLGWLMGRDIRTLPRLCRELAERLP----A--APAARAALDMALHDLVAQCLGLPLVEILGR---A-HDSLPT--S 133 (356)
T ss_dssp HCGGGCTTTTTCBGGGHHHHHHHHHHHCT----T--CHHHHHHHHHHHHHHHHHHHTSBHHHHTCC---C-CSCEEB--C
T ss_pred HHHHhHHHhcCCCccCHHHHHHHHHHhhc----c--chhHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceee--e
Confidence 88889999999999999999999875321 1 157999999999999999999999999998 3 345554 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
..++.+ + .+...+++.+...++|+.+| .|.| . +.+.+.+.++.||++
T Consensus 134 ~~~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----~K~G-------~------~~~~d~~~v~avR~~ 180 (356)
T 3ro6_B 134 VTIGIK-------P---------VEETLAEAREHLALGFRVLK----VKLC-------G------DEEQDFERLRRLHET 180 (356)
T ss_dssp EEECSC-------C---------HHHHHHHHHHHHHTTCCEEE----EECC-------S------CHHHHHHHHHHHHHH
T ss_pred EEEcCC-------C---------HHHHHHHHHHHHHcCCCEEE----EEeC-------C------CHHHHHHHHHHHHHH
Confidence 333211 0 11233444444444565554 4433 1 223456666666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|++
T Consensus 181 ~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~ 232 (356)
T 3ro6_B 181 L---AGR-AVVRVDPN-----------------------QSYDRDGLLRLD-RLVQELGIEFIEQPFPAGRTDWLRALPK 232 (356)
T ss_dssp H---TTS-SEEEEECT-----------------------TCCCHHHHHHHH-HHHHHTTCCCEECCSCTTCHHHHHTSCH
T ss_pred h---CCC-CEEEEeCC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEECCCCCCcHHHHHHHHh
Confidence 6 644 456 8883 367889999875 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCC-CCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIP-LAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SF 427 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~-a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~ 427 (479)
++ +||++||+.. ++++++++++.+ ++|++ ++|++++||||++++++++|+++|+++++++ +.|+.. ++
T Consensus 233 ~~~iPIa~dE~~~-~~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~es~i~~aa 304 (356)
T 3ro6_B 233 AIRRRIAADESLL-GPADAFALAAPPAACGIF------NIKLMKCGGLAPARRIATIAETAGIDLMWGC-MDESRISIAA 304 (356)
T ss_dssp HHHHTEEESTTCC-SHHHHHHHHSSSCSCSEE------EECHHHHCSHHHHHHHHHHHHHHTCEEEECC-CSCCHHHHHH
T ss_pred cCCCCEEeCCcCC-CHHHHHHHHhcCCcCCEE------EEcccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHH
Confidence 99 9999999764 599999999999 99999 9999999999999999999999999998755 456654 45
Q ss_pred HHHhHhhcC
Q 011677 428 IADLSVGLA 436 (479)
Q Consensus 428 ~~dlAv~~~ 436 (479)
.+|||.++.
T Consensus 305 ~~hlaaa~p 313 (356)
T 3ro6_B 305 ALHAALACP 313 (356)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHhcCC
Confidence 667776653
No 82
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=6.7e-40 Score=338.28 Aligned_cols=295 Identities=13% Similarity=0.120 Sum_probs=223.0
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. .+.+ ++++.|+|+|++|++ |+||+.. ++ ..+..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~GE~~g----------~~--~~~~~ 60 (382)
T 2gdq_A 3 LVKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGID----------GWGECVD----------WL--PALHV 60 (382)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCE----------EEEEECS----------CH--HHHHH
T ss_pred CCEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCE----------EEEeecC----------ch--HHHHH
Confidence 4799999998873 2332 457999999999984 9999751 11 24566
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+||.+++.+|+.|.+.. .+|++|||+||||+.||..|+|||++||| ..+. ++|+
T Consensus 61 ~i~~~l~~~l~G~d~~~~~~~~~~l~~~~---------~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~--~vp~ 126 (382)
T 2gdq_A 61 GFTKRIIPFLLGKQAGSRLSLVRTIQKWH---------QRAASAVSMALTEIAAKAADCSVCELWGG---RYRE--EIPV 126 (382)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHC---------HHHHHHHHHHHHHHHHHHTTSBHHHHTTC---CSCS--EEEE
T ss_pred HHHHHHHHHhcCCCcccHHHHHHHHHHHH---------hHHHHHHHHHHHHHHHHHcCCcHHHHcCC---CCCC--ceeE
Confidence 67777999999999999999999997531 57999999999999999999999999998 3233 4555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
|+.+ |+.+ ++.+++ | ...+++.+...++|+.+| .|.| . .+.+.+.+.++.||+
T Consensus 127 ~~~~-g~~~-~~~~~~-e--------~~~~~a~~~~~~Gf~~vK----ik~g-------~-----~~~~~d~e~v~avR~ 179 (382)
T 2gdq_A 127 YASF-QSYS-DSPQWI-S--------RSVSNVEAQLKKGFEQIK----VKIG-------G-----TSFKEDVRHINALQH 179 (382)
T ss_dssp EEEC-CCBC-SSTTHH-H--------HHHHHHHHHHTTTCCEEE----EECS-------S-----SCHHHHHHHHHHHHH
T ss_pred EEEe-cccC-CCcccH-H--------HHHHHHHHHHHcCCCEEE----EcCC-------C-----CCHHHHHHHHHHHHH
Confidence 6654 2211 111111 1 123344444444555544 3322 1 123345666766766
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhC-CceeeecCCCccCHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADY-PIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~-~i~~iEdP~~~~D~~g~~~L 349 (479)
++ |.+ ..+ +|+| +.||.++++++.. .+++| ++.|||||++++|++++++|
T Consensus 180 a~---G~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~~i~~iEqP~~~~d~~~~~~l 231 (382)
T 2gdq_A 180 TA---GSS-ITMILDAN-----------------------QSYDAAAAFKWER-YFSEWTNIGWLEEPLPFDQPQDYAML 231 (382)
T ss_dssp HH---CTT-SEEEEECT-----------------------TCCCHHHHHTTHH-HHTTCSCEEEEECCSCSSCHHHHHHH
T ss_pred hh---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHhhccCCeEEECCCCcccHHHHHHH
Confidence 66 644 456 8883 3578899998764 58999 99999999999999999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ | +.|+..+.+
T Consensus 232 ~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~-~-~~es~i~~~ 302 (382)
T 2gdq_A 232 RSRLSVPVAGGENMK-GPAQYVPLLSQRCLDII------QPDVMHVNGIDEFRDCLQLARYFGVRASA-H-AYDGSLSRL 302 (382)
T ss_dssp HTTCSSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCCTTTTTHHHHHHHHHHHHHHHTCEECC-C-CSSCSHHHH
T ss_pred HhhCCCCEEecCCcC-CHHHHHHHHHcCCCCEE------ecCccccCCHHHHHHHHHHHHHcCCEEee-c-CCCcHHHHH
Confidence 9999 9999999875 59999999999999999 99999999999999999999999999765 5 678888877
Q ss_pred HHhHhhcCCC
Q 011677 429 ADLSVGLASG 438 (479)
Q Consensus 429 ~dlAv~~~~~ 438 (479)
++++++...+
T Consensus 303 a~l~laa~~~ 312 (382)
T 2gdq_A 303 YALFAQACLP 312 (382)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHhCc
Confidence 7777665444
No 83
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=6.8e-40 Score=335.58 Aligned_cols=296 Identities=18% Similarity=0.144 Sum_probs=222.3
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+.+.+. ++.+ +++++|+|+|++|++ |+||+.+. .+++. ++..
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~----------G~Ge~~~~--------~~~~~-~~~~ 63 (359)
T 1mdl_A 3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVV----------GHSYLFAY--------TPVAL-KSLK 63 (359)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEEECS--------SGGGH-HHHH
T ss_pred CCEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCE----------EEEEeecC--------CCchH-HHHH
Confidence 5799999998772 3333 246899999999984 99998653 24445 6677
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.|++.++|.|+|+||.+++.+ +.|.+......+.++..+|++|||+||||+.||..|+|||++||| . +.+ +|+
T Consensus 64 ~i~~~l~~~l~g~d~~~~~~~-~~l~~~~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llGg---~-~~~--vp~ 136 (359)
T 1mdl_A 64 QLLDDMAAMIVNEPLAPVSLE-AMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGA---N-ARP--VQA 136 (359)
T ss_dssp HHHHHHHHHHTTSBSCHHHHH-HHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTC---C-CCC--EEE
T ss_pred HHHHHHHHHHCCCCccchHHH-HHHHHHHHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhCC---C-CCC--eee
Confidence 788889999999999999999 888653211111235678999999999999999999999999998 3 344 455
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKE 271 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ 271 (479)
|+. +|. .+.++ ..+++.+...++|+.+| .|.| . ++.+.+.+.++.||+
T Consensus 137 ~~~--~g~-----~~~~~---------~~~~a~~~~~~Gf~~iK----ik~g-------~-----~~~~~~~e~v~avr~ 184 (359)
T 1mdl_A 137 YDS--HSL-----DGVKL---------ATERAVTAAELGFRAVK----TRIG-------Y-----PALDQDLAVVRSIRQ 184 (359)
T ss_dssp EEE--CCS-----CHHHH---------HHHHHHHHHHTTCSEEE----EECC-------C-----SSHHHHHHHHHHHHH
T ss_pred eee--cCC-----CCHHH---------HHHHHHHHHHcCCCEEE----EecC-------C-----CCHHHHHHHHHHHHH
Confidence 654 221 11221 23344444444555444 3322 1 122334566666666
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVL 350 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~ 350 (479)
++ |.+ ..+ +|++ +.||.+++++++. .+++|++.|||||++++|++++++|+
T Consensus 185 a~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iE~P~~~~~~~~~~~l~ 236 (359)
T 1mdl_A 185 AV---GDD-FGIMVDYN-----------------------QSLDVPAAIKRSQ-ALQQEGVTWIEEPTLQHDYEGHQRIQ 236 (359)
T ss_dssp HH---CSS-SEEEEECT-----------------------TCSCHHHHHHHHH-HHHHHTCSCEECCSCTTCHHHHHHHH
T ss_pred Hh---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHHHhCCCeEECCCChhhHHHHHHHH
Confidence 66 644 345 8883 3578899998765 48999999999999999999999999
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHH
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIA 429 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~ 429 (479)
+++ +||++||... ++++++++++.+++|++ ++|++++||+|++++++++|+++|+++|++ ++++ +.+
T Consensus 237 ~~~~iPI~~de~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~-~~~~----a~~ 304 (359)
T 1mdl_A 237 SKLNVPVQMGENWL-GPEEMFKALSIGACRLA------MPDAMKIGGVTGWIRASALAQQFGIPMSSH-LFQE----ISA 304 (359)
T ss_dssp HTCSSCEEECTTCC-SHHHHHHHHHTTCCSEE------CCBTTTTTHHHHHHHHHHHHHHTTCCBCCB-SCHH----HHH
T ss_pred HhCCCCEEeCCCCC-CHHHHHHHHHcCCCCEE------eecchhhCCHHHHHHHHHHHHHcCCeEeec-cHHH----HHH
Confidence 999 9999999865 59999999999999999 999999999999999999999999998664 4432 788
Q ss_pred HhHhhcCC
Q 011677 430 DLSVGLAS 437 (479)
Q Consensus 430 dlAv~~~~ 437 (479)
|+|+++..
T Consensus 305 ~laaa~~~ 312 (359)
T 1mdl_A 305 HLLAATPT 312 (359)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 99888753
No 84
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=5.8e-40 Score=340.40 Aligned_cols=322 Identities=14% Similarity=0.084 Sum_probs=214.9
Q ss_pred ceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCC
Q 011677 45 SVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGM 124 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~ 124 (479)
|+|++|+.+.+- .....+.|+|+|++|+ +|+||+. +.++++ ...+.+.++|.|+|+
T Consensus 1 MkIt~ie~~~~~--~~~~~~~V~v~td~G~----------~G~GE~~---------~~~~~~---~~~i~~~l~p~liG~ 56 (400)
T 4dxk_A 1 MKITKLETVRVA--ERTNLLWVLVHTDEGI----------TGLGETF---------FGAETV---ETYVHEYIAPRVIGR 56 (400)
T ss_dssp CCEEEEEEEEET--TSTTEEEEEEEETTSC----------CEEEEEE---------SCHHHH---HHHHHHTHHHHHTTS
T ss_pred CeEEEEEEEEEC--CCCCEEEEEEEECCCC----------EEEEcCC---------CCccHH---HHHHHHHHHHHhCCC
Confidence 699999998873 3456799999999999 5999942 233333 233455699999999
Q ss_pred CCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEe-ecCCccCCC
Q 011677 125 DPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTV-ISGGKHAGN 203 (479)
Q Consensus 125 d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~-i~GG~~~~~ 203 (479)
||.+++++|+.|..+.+. ..+++..+|++|||+||||+.||.+|+|||+|||| ..+.++|+..... +.|..+...
T Consensus 57 dp~~~~~~~~~~~~~~~~-~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~yas~~~~~~~~~~~~ 132 (400)
T 4dxk_A 57 DPLQIDLLAQDLVGYLGF-RSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLGG---FSRREIRTYNTCAGTEYIKKATG 132 (400)
T ss_dssp CTTCHHHHHHHHCCSSSC-SSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSCEEEEBC------------
T ss_pred CcchHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCC---CccCceeEEEecccccccccccc
Confidence 999999999999222111 22345678999999999999999999999999998 3445666543111 111111000
Q ss_pred --------cccccceeeccCCCCc-HHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCC--CCCchHHHHHHHHHH
Q 011677 204 --------NLAIQDIMILPIGASS-FGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAP--NISSIREGLDLVKEA 272 (479)
Q Consensus 204 --------~l~~~e~~i~p~~~~~-~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~--~~~~~~~~l~~v~~a 272 (479)
.....+-+. |-.... .+.+.+...++|+++| .|.|... ..++.+++.+ +++.+.+.++.||++
T Consensus 133 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~a~~~~~~G~~~~K----ik~g~~~-~~~~~~g~~~~~~~~~d~~~v~avR~a 206 (400)
T 4dxk_A 133 QQTANYGLSGGKDYDDL-NGFLHRADELAHSLLEDGITAMK----IWPFDAA-AEKTRGQYISMPDLKSALEPFEKIRKA 206 (400)
T ss_dssp -----------------------CHHHHHHHHHHTTCCEEE----ECTTHHH-HHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhc-ccccccHHHHHHHHHHhCCCEEE----EcCCCcc-ccccccCcCCHHHHHHHHHHHHHHHHH
Confidence 000000000 000001 1222233344555554 3322000 0000011111 122345566666666
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ |.+ ..+ +|+| +.||.++++++. +.++++++.|||||++++|++++++|++
T Consensus 207 ~---g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iEeP~~~~~~~~~~~l~~ 258 (400)
T 4dxk_A 207 V---GDK-MDIMVEFH-----------------------SMWQLLPAMQIA-KALTPYQTFWHEDPIKMDSLSSLTRYAA 258 (400)
T ss_dssp H---GGG-SEEEEECT-----------------------TCBCHHHHHHHH-HHTGGGCCSEEECCBCTTSGGGHHHHHH
T ss_pred c---CCC-ceEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCCEEEcCCCcccHHHHHHHHH
Confidence 6 533 345 8883 367889999875 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCc--hhHH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETE--DSFI 428 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~--d~~~ 428 (479)
++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+++ +. .++.
T Consensus 259 ~~~iPIa~dE~~~-~~~~~~~~l~~~a~d~v------~~d~~~~GGit~~~kia~~A~~~gi~~~~-h~~~-s~i~~aa~ 329 (400)
T 4dxk_A 259 VSPAPISASETLG-SRWAFRDLLETGAAGVV------MLDISWCGGLSEARKIASMAEAWHLPVAP-HXCT-GPVVLCAS 329 (400)
T ss_dssp HCSSCEEECTTCC-HHHHHHHHHHTTCCCEE------EECTTTTTHHHHHHHHHHHHHHTTCCEEE-C-CC-CHHHHHHH
T ss_pred hCCCCEEecCCcC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCEEEe-cCCC-ChHHHHHH
Confidence 99 9999999864 59999999999999999 99999999999999999999999999855 6543 43 3566
Q ss_pred HHhHhhcCC
Q 011677 429 ADLSVGLAS 437 (479)
Q Consensus 429 ~dlAv~~~~ 437 (479)
+|||.++.+
T Consensus 330 ~hlaaa~p~ 338 (400)
T 4dxk_A 330 THLSLNAPN 338 (400)
T ss_dssp HHHHHHCTT
T ss_pred HHHHHhCCC
Confidence 777777643
No 85
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=343.05 Aligned_cols=301 Identities=15% Similarity=0.149 Sum_probs=215.4
Q ss_pred CceeeEEEEEEEecC----------C----CCceEEEEEEeCC--CceeeecCCCCCCCceeeeeeccCCCCccccccHH
Q 011677 44 PSVITKIKARQILDS----------R----GIPTVEVDLFTHK--GMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVN 107 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds----------~----g~~~v~V~v~t~~--G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~ 107 (479)
+|+|++|+++.+.-+ . ....+.|+|+|++ |+ +|+||+... +.+..
T Consensus 4 ~mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~----------~G~Ge~~~~---------g~~~~ 64 (441)
T 4a35_A 4 RGRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGI----------KGCGITFTL---------GKGTE 64 (441)
T ss_dssp CCBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCC----------CEEEEEEEC---------STTHH
T ss_pred CCEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCC----------EEEEeeeCC---------CCChH
Confidence 579999999998422 1 1237999999998 98 599998653 22334
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHh-hhc------cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhccc
Q 011677 108 RAVKNINERISEALVGMDPILQSQIDQAMID-LDK------TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLA 180 (479)
Q Consensus 108 ~av~~i~~~l~p~LiG~d~~~~~~id~~l~~-~~~------~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~ 180 (479)
.+...+ +.++|.|+|+||.+.+++|+.|++ +.. .+..+++...|++|||+||||++||.+|+|||+||||.
T Consensus 65 ~~~~~i-~~l~~~liG~d~~~i~~~~~~~~~~l~~~~~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~- 142 (441)
T 4a35_A 65 VVVCAV-NALAHHVLNKDLKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDM- 142 (441)
T ss_dssp HHHHHH-HHHGGGTTTCBHHHHHTTHHHHHHHHHSCTTGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHS-
T ss_pred HHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHHHhhccceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCC-
Confidence 444445 569999999999998765555543 211 11113355789999999999999999999999999983
Q ss_pred CCCCcccc---------------------------------------cceEEeecCCccCCCcccccceeeccCCCCcHH
Q 011677 181 GKTNLTLP---------------------------------------VPAFTVISGGKHAGNNLAIQDIMILPIGASSFG 221 (479)
Q Consensus 181 ~~~~~~~P---------------------------------------vp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ 221 (479)
.+.+++ +|.|++. +|+.. .+. +...+
T Consensus 143 --~r~~i~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~-~g~~~---~~~---------e~~~~ 207 (441)
T 4a35_A 143 --DPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTS-CAWLG---YSD---------DTLKQ 207 (441)
T ss_dssp --CHHHHHTTCCCTTTTTTCCHHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECT-TCCTT---CCH---------HHHHH
T ss_pred --CcccceecccccccccccchhhhhhhhhhcccccchhhhhhcccCcceEEec-cccCC---CCH---------HHHHH
Confidence 223332 5667642 22211 111 11233
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeec
Q 011677 222 EALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDL 300 (479)
Q Consensus 222 ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~ 300 (479)
++.+...++|+++| .|.| . +.+.+.++++.||+++ |.+ ..+ +|+|
T Consensus 208 ~a~~~~~~Gf~~~K----lKvG-------~------~~~~d~~~v~avR~a~---G~~-~~l~vDaN------------- 253 (441)
T 4a35_A 208 LCAQALKDGWTRFK----VKVG-------A------DLQDDMRRCQIIRDMI---GPE-KTLMMDAN------------- 253 (441)
T ss_dssp HHHHHHHTTCCEEE----EECS-------S------CHHHHHHHHHHHHHHH---CTT-SEEEEECT-------------
T ss_pred HHHHHHHCCCCEEE----EcCC-------C------CHHHHHHHHHHHHHHh---CCC-CeEEEECC-------------
Confidence 44444445555554 3432 1 2334556666666666 654 456 8983
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhh---h-hhhhcCCccccCHHHHHHHhcCC
Q 011677 301 DFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQI---C-QQVVGDDLLMSNPKRIERATLIP 376 (479)
Q Consensus 301 ~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~---~-~~I~gde~~~t~~~~~~~~i~~~ 376 (479)
+.||.++++++. +.+++|++.|||||++++|++++++|+++ + +||++||... ++++++++++.+
T Consensus 254 ----------~~~~~~~A~~~~-~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~-~~~~~~~~l~~~ 321 (441)
T 4a35_A 254 ----------QRWDVPEAVEWM-SKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCH-NRVIFKQLLQAK 321 (441)
T ss_dssp ----------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGTCEEEECTTCC-SHHHHHHHHHTT
T ss_pred ----------CCCCHHHHHHHH-HhhcccCccEEeCCCCcccHHHHHHHHHhccCCCCCEEeCCccc-cHHHHHHHHHcC
Confidence 367889999875 45899999999999999999999999997 7 9999999865 599999999999
Q ss_pred CCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHh
Q 011677 377 LAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSV 433 (479)
Q Consensus 377 a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv 433 (479)
++|++ |+|++++||||++++++++|+++|+++ .+|.++-.-.+..+||++
T Consensus 322 a~div------~~d~~~~GGit~~~kia~lA~~~gv~v-~~H~~~ig~aa~~~hl~~ 371 (441)
T 4a35_A 322 ALQFL------QIDSCRLGSVNENLSVLLMAKKFEIPV-CPHAGGVGLCELVQHLII 371 (441)
T ss_dssp CCSEE------CCCTTTSSHHHHHHHHHHHHHHTTCCB-CCCCCTTTHHHHHHHHHH
T ss_pred CCCEE------EECccccCCHHHHHHHHHHHHHcCCEE-EEeCChHHHHHHHHHHhh
Confidence 99999 999999999999999999999999996 678653221123456653
No 86
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=1.1e-39 Score=337.18 Aligned_cols=297 Identities=16% Similarity=0.157 Sum_probs=222.4
Q ss_pred CceeeEEEEEEEecC---------CC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQILDS---------RG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds---------~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
+|+|++|+.+.+.-. .| ...+.|+|+|++|++ |+||+.++. +.|++++...+.
T Consensus 22 ~MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~----------G~GE~~~~~----~~~~~~~~~~~~ 87 (391)
T 4e8g_A 22 SMKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLA----------GWGETCPVG----PTYAPSHALGAR 87 (391)
T ss_dssp -CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCE----------EEEEECCSS----TTTSSCCHHHHH
T ss_pred CCEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCE----------EEecCcCCC----CccCCccHHHHH
Confidence 479999999888422 12 356999999999994 999987641 357766677777
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..+++ ++|.|+|+||.+.+.+|+.|.... .+. .+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 88 ~~l~~-l~p~l~G~d~~~~~~~~~~l~~~~----~g~--~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~r~~v~~- 156 (391)
T 4e8g_A 88 AALAE-MAPGLIGANPLQPLVLRRRMDGLL----CGH--NYAKAAIDIAAYDLMGKHYGVRVADLLGG---VAAERVPS- 156 (391)
T ss_dssp HHHHH-HGGGGTTCCTTCHHHHHHHHHTTC----SSC--HHHHHHHHHHHHHHHHHHHTCBGGGGTTC---CSCSEEEC-
T ss_pred HHHHH-HHHHHCCCCcCCHHHHHHHHHHHh----cCc--HHHHHHHHHHHHHHHHHHcCChHHHhcCC---CCCCcEEE-
Confidence 77765 999999999999999999997532 111 47999999999999999999999999998 33445555
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
|..++.+ +. +...+++.+...++|+.+| .|.|. .+.+.+.+.++.||
T Consensus 157 -y~s~~~~-------~~---------e~~~~~a~~~~~~G~~~~K----lKvg~------------~~~~~d~~~v~avR 203 (391)
T 4e8g_A 157 -YYATGIG-------QP---------DEIARIAAEKVAEGFPRLQ----IKIGG------------RPVEIDIETVRKVW 203 (391)
T ss_dssp -CEEECSC-------CH---------HHHHHHHHHHHHTTCSEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred -eEEcCCC-------CH---------HHHHHHHHHHHHcCCcEEE----EcCCC------------CCHHHHHHHHHHHH
Confidence 4443221 11 1223344444445565554 45331 11234455555555
Q ss_pred HHHHhcC-CCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 271 EAINRTG-IPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 271 ~ai~~~g-~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
+++ | .+ ..+ +|+| +.||.++++++. +.+++|++ |||||+ +|++++++
T Consensus 204 ~a~---gg~~-~~L~vDaN-----------------------~~w~~~~A~~~~-~~L~~~~i-~iEeP~--~~~~~~~~ 252 (391)
T 4e8g_A 204 ERI---RGTG-TRLAVDGN-----------------------RSLPSRDALRLS-RECPEIPF-VLEQPC--NTLEEIAA 252 (391)
T ss_dssp HHH---TTTT-CEEEEECT-----------------------TCCCHHHHHHHH-HHCTTSCE-EEESCS--SSHHHHHH
T ss_pred HHh---CCCC-CeEEEeCC-----------------------CCCCHHHHHHHH-HHHhhcCe-EEecCC--ccHHHHHH
Confidence 555 5 55 456 9983 367889999875 45799999 999996 59999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED-- 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d-- 425 (479)
|++++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|++++++|+. |+..
T Consensus 253 l~~~~~iPIa~dE~~~-~~~~~~~~~~~~a~d~v------~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~-es~i~~ 324 (391)
T 4e8g_A 253 IRGRVQHGIYLDESGE-DLSTVIRAAGQGLCDGF------GMKLTRIGGLQQMAAFRDICEARALPHSCDDAW-GGDIIA 324 (391)
T ss_dssp HGGGCCSCEEESTTCC-SHHHHHHHHHTTCCSEE------EEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSS-CSHHHH
T ss_pred HHhhCCCCEEeCCCCC-CHHHHHHHHHcCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCeEEeCCcC-CCHHHH
Confidence 99999 9999999865 59999999999999999 999999999999999999999999999887765 5544
Q ss_pred hHHHHhHhhcCC
Q 011677 426 SFIADLSVGLAS 437 (479)
Q Consensus 426 ~~~~dlAv~~~~ 437 (479)
++.+|||.++.+
T Consensus 325 aa~~hlaaa~p~ 336 (391)
T 4e8g_A 325 AACTHIGATVQP 336 (391)
T ss_dssp HHHHHHHTTSCG
T ss_pred HHHHHHHHhCCC
Confidence 456677776543
No 87
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=9.1e-40 Score=336.87 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=221.6
Q ss_pred ceeeEEEEEEEe--------cCCCC------ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 45 SVITKIKARQIL--------DSRGI------PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g~------~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
|+|++|+.+.+. .+.+. ++++|+|+|++|+ +|+||+.++ + +.|.++++.++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~---~-~~~~~~~~~~~~ 68 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGV----------TGWGEGCPW---G-HSYLPAHGPGLR 68 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSC----------EEEEEECCS---T-TTSSSCCHHHHH
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCC----------EEEEEEecC---C-CCcCCCCHHHHH
Confidence 689999998772 33342 4699999999998 499998765 1 468888888888
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..++ .++|.|+|+||.+++++|+.|... . ++ ..+|++|||+||||+.||..|+|||++||| ..+.+ +|
T Consensus 69 ~~l~-~l~~~l~g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~~--v~ 136 (378)
T 2qdd_A 69 AGIA-TLAPHLLGLDPRSLDHVNRVMDLQ---L-PG--HSYVKSPIDMACWDILGQVAGLPLWQLLGG---EAATP--VP 136 (378)
T ss_dssp HHHH-HHHHHHTTCCTTCHHHHHHHHHHH---S-CS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---SSCCC--EE
T ss_pred HHHH-HHHHHHCCCCccCHHHHHHHHHHh---h-cc--chHHHHHHHHHHHHHHHHHcCCcHHHHhCC---CCCCC--Cc
Confidence 8888 899999999999999999998432 1 22 368999999999999999999999999998 32344 44
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+|.+++.+ +.+ ...+++.+...++|+.+| .|.| . ++.+.+.+.++.||
T Consensus 137 ~~~~~~~~-------~~e---------~~~~~a~~~~~~Gf~~iK----ik~g-------~-----~~~~~~~e~v~avr 184 (378)
T 2qdd_A 137 INSSISTG-------TPD---------QMLGLIAEAAAQGYRTHS----AKIG-------G-----SDPAQDIARIEAIS 184 (378)
T ss_dssp BEEEECSC-------CHH---------HHHHHHHHHHHHTCCEEE----EECC-------S-----SCHHHHHHHHHHHH
T ss_pred eEEEecCC-------CHH---------HHHHHHHHHHHHhhhhee----ecCC-------C-----CChHHHHHHHHHHH
Confidence 56554221 111 123445555555565554 3422 1 12223344444444
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
++ +|.+ ..+ +|++ +.||.++++++++. ++ |++ |||||++ |+++|++|
T Consensus 185 ~a---~g~~-~~l~vDan-----------------------~~~~~~~a~~~~~~-l~-~~i-~iEqP~~--d~~~~~~l 232 (378)
T 2qdd_A 185 AG---LPDG-HRVTFDVN-----------------------RAWTPAIAVEVLNS-VR-ARD-WIEQPCQ--TLDQCAHV 232 (378)
T ss_dssp HS---CCTT-CEEEEECT-----------------------TCCCHHHHHHHHTS-CC-CCC-EEECCSS--SHHHHHHH
T ss_pred HH---hCCC-CEEEEeCC-----------------------CCCCHHHHHHHHHH-hC-CCc-EEEcCCC--CHHHHHHH
Confidence 43 4644 346 8873 35788999988654 68 999 9999998 99999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS-- 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~-- 426 (479)
++++ +||++||+.. ++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++ ++.|+..+
T Consensus 233 ~~~~~iPI~~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~-~~~es~i~~a 304 (378)
T 2qdd_A 233 ARRVANPIMLDECLH-EFSDHLAAWSRGACEGV------KIKPNRVGGLTRARQIRDFGVSVGWQMHIE-DVGGTALADT 304 (378)
T ss_dssp HTTCCSCEEECTTCC-SHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEEEEC-CSSCCHHHHH
T ss_pred HHhCCCCEEECCCcC-CHHHHHHHHHhCCCCEE------EecccccCCHHHHHHHHHHHHHcCCeEEec-CCCCcHHHHH
Confidence 9999 9999999865 59999999999999999 999999999999999999999999998665 45677654
Q ss_pred HHHHhHhhcCC
Q 011677 427 FIADLSVGLAS 437 (479)
Q Consensus 427 ~~~dlAv~~~~ 437 (479)
+.+|||.++..
T Consensus 305 a~~hlaaa~~~ 315 (378)
T 2qdd_A 305 AALHLAASTPE 315 (378)
T ss_dssp HHHHHHHTSCT
T ss_pred HHHHHHHcCCC
Confidence 45666666543
No 88
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=2.3e-39 Score=334.98 Aligned_cols=296 Identities=15% Similarity=0.111 Sum_probs=222.0
Q ss_pred ceeeEEEEEEEecCCCC--------------------c-----------eEEEEEEeCCCceeeecCCCCCCCceeeeee
Q 011677 45 SVITKIKARQILDSRGI--------------------P-----------TVEVDLFTHKGMFRASVPSGDPSGMYEALEL 93 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~--------------------~-----------~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~ 93 (479)
|+|++|+.+.+.-.... | +++|+|+|++|++ |+||+.+.
T Consensus 3 mkI~~i~~~~~~~pl~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~ 72 (388)
T 2nql_A 3 SPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPTFDRSVLVRMTTEAGTV----------GWGETYGI 72 (388)
T ss_dssp CCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEESSEEEEEEEEEETTCCE----------EEEEEECS
T ss_pred ceEeEEEEEEEeccCcccccccccccccccccccccCCccccccCccceEEEEEEEECCCCE----------EEEEecCC
Confidence 69999999988422111 2 6899999999984 99998653
Q ss_pred ccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCC--CchhhhHHHHHHHHHHHHHHHhcCch
Q 011677 94 RDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKK--GELGANAILAVSIAACKAGAAEKEVP 171 (479)
Q Consensus 94 ~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~--~~~g~~A~~AvsiAl~da~ak~~g~P 171 (479)
.+++ .+...|++.++|.|+|+|+.+++.+|+.|.++ ++.+. .++..+|++|||+||||+.||..|+|
T Consensus 73 --------~~~~--~~~~~i~~~l~~~l~G~d~~~~~~i~~~l~~~-~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~P 141 (388)
T 2nql_A 73 --------VAPG--AVAALINDLLAGFVIGRDASDPSAVYDDLYDM-MRVRGYTGGFYVDALAALDIALWDIAGQEAGKS 141 (388)
T ss_dssp --------SCHH--HHHHHHHHTHHHHHTTCCSSSHHHHHHHHHHH-HGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSB
T ss_pred --------CCcH--HHHHHHHHHHHHHhcCCCcccHHHHHHHHHhh-cccccCCchHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 2222 45666777799999999999999999999542 22222 24567999999999999999999999
Q ss_pred hHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCC
Q 011677 172 LYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGE 251 (479)
Q Consensus 172 Ly~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~ 251 (479)
||++||| . +.++| .|+++ |.+. +.++ ..+++.+...++|+.+| .|.| .
T Consensus 142 l~~llGg---~-~~~vp--~~~~~--g~~~----~~e~---------~~~~a~~~~~~Gf~~vK----ik~g-------~ 189 (388)
T 2nql_A 142 IRDLLGG---G-VDSFP--AYVSG--LPER----TLKA---------RGELAKYWQDRGFNAFK----FATP-------V 189 (388)
T ss_dssp HHHHTTC---C-CSEEE--EEEEC--CCCS----SHHH---------HHHHHHHHHHTTCCEEE----EEGG-------G
T ss_pred HHHHhCC---C-CCceE--eeEEe--CCCC----CHHH---------HHHHHHHHHHhCCCEEE----EeCC-------C
Confidence 9999998 3 34544 46543 2111 1222 23444444444555554 3322 1
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCC
Q 011677 252 DGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYP 330 (479)
Q Consensus 252 ~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~ 330 (479)
.+.+. .+.++.||+++ |.+ ..+ +|++ +.||.++++++++ .+++|+
T Consensus 190 -----~~~~~-~e~v~avr~a~---g~d-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~ 235 (388)
T 2nql_A 190 -----ADDGP-AAEIANLRQVL---GPQ-AKIAADMH-----------------------WNQTPERALELIA-EMQPFD 235 (388)
T ss_dssp -----CTTCH-HHHHHHHHHHH---CTT-SEEEEECC-----------------------SCSCHHHHHHHHH-HHGGGC
T ss_pred -----CChHH-HHHHHHHHHHh---CCC-CEEEEECC-----------------------CCCCHHHHHHHHH-HHhhcC
Confidence 12344 56677776666 644 345 8873 3578899998865 589999
Q ss_pred ceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhh
Q 011677 331 IVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLAND 409 (479)
Q Consensus 331 i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~ 409 (479)
+.|||||++++|+++|++|++++ +||++||+.. ++++++++++.+++|+| ++|+++ ||+|++++++++|++
T Consensus 236 i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~-~~~~~~~~i~~~~~d~v------~ik~~~-GGit~~~~i~~~A~~ 307 (388)
T 2nql_A 236 PWFAEAPVWTEDIAGLEKVSKNTDVPIAVGEEWR-THWDMRARIERCRIAIV------QPEMGH-KGITNFIRIGALAAE 307 (388)
T ss_dssp CSCEECCSCTTCHHHHHHHHTSCCSCEEECTTCC-SHHHHHHHHTTSCCSEE------CCCHHH-HCHHHHHHHHHHHHH
T ss_pred CCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCCEE------EecCCC-CCHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999865 69999999999999999 999999 999999999999999
Q ss_pred CCCeEEEecCCCCCchh--HHHHhHhhcC
Q 011677 410 VPWGVVISHRSGETEDS--FIADLSVGLA 436 (479)
Q Consensus 410 ~g~~~~v~h~~get~d~--~~~dlAv~~~ 436 (479)
+|+++++ |++.||..+ +.+|||.++.
T Consensus 308 ~g~~~~~-h~~~es~i~~aa~~hlaa~~~ 335 (388)
T 2nql_A 308 HGIDVIP-HATVGAGIFLAASLQASSTLS 335 (388)
T ss_dssp HTCEECC-CCCSSCSHHHHHHHHHHTTCT
T ss_pred cCCeEEe-ecCCCcHHHHHHHHHHHHhCC
Confidence 9999866 767788765 4556665553
No 89
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-40 Score=338.68 Aligned_cols=291 Identities=19% Similarity=0.200 Sum_probs=223.5
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ ++++.|+|+|+ |+ +|+||+...+. +.|.++++.++...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td-G~----------~G~GE~~~~~~---~~~~~e~~~~~~~~ 66 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFGE-GL----------EGLGEGVMERL---PLYREETVAGARYL 66 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TE----------EEEEECCCBSS---CSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEEC-Ce----------EEEEEeccCCC---CcccCCCHHHHHHH
Confidence 689999988773 2222 46799999995 98 49999876532 46888999988888
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.++|.|+|+|+.+++++|+.|..+.+ +.+|++|||+||||+.||..|+|||++||| . +.++|++ |
T Consensus 67 i~~~l~~~l~G~d~~~~~~l~~~~~~~~g-------~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~-~~~~~~~-~ 134 (369)
T 2zc8_A 67 LEEVFLPRVLGRDLPNPEALREALAPFRG-------NPMAKAVLEMAFFDLWAKALGRPLWQVLGG---V-RQAVEVG-V 134 (369)
T ss_dssp HHHTHHHHHTTCBCSSHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTSBHHHHHTC---C-CSEEEBC-E
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCceece-E
Confidence 98889999999999999999988854321 257999999999999999999999999998 3 2355654 4
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
++ |.+. +.++ ..+++.+...++|+.+| .| ++ + +.+.+.++.||++
T Consensus 135 ~~---g~~~----~~~~---------~~~~a~~~~~~G~~~iK----ik-------~~------~--~~d~~~v~avr~a 179 (369)
T 2zc8_A 135 SL---GIQP----SVED---------TLRVVERHLEEGYRRIK----LK-------IK------P--GWDYEVLKAVREA 179 (369)
T ss_dssp EE---CCCS----SHHH---------HHHHHHHHHHTTCSCEE----EE-------CB------T--TBSHHHHHHHHHH
T ss_pred Ee---cCCC----CHHH---------HHHHHHHHHHhhhheee----ee-------cC------h--hHHHHHHHHHHHH
Confidence 42 2210 1111 23444444445555544 23 11 2 2346777777766
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ .+ ..+ +|+| +.||.++ +++. +.+++|++.|||||++++|+++|++|++
T Consensus 180 ~----~~-~~l~vDan-----------------------~~~~~~~-~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~ 229 (369)
T 2zc8_A 180 F----PE-ATLTADAN-----------------------SAYSLAN-LAQL-KRLDELRLDYIEQPLAYDDLLDHAKLQR 229 (369)
T ss_dssp C----TT-SCEEEECT-----------------------TCCCGGG-HHHH-HGGGGGCCSCEECCSCTTCSHHHHHHHH
T ss_pred c----CC-CeEEEecC-----------------------CCCCHHH-HHHH-HHHHhCCCcEEECCCCcccHHHHHHHHh
Confidence 5 12 345 8983 2457778 8765 5589999999999999999999999999
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FI 428 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~ 428 (479)
++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++|++|+. |+..+ +.
T Consensus 230 ~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~-es~i~~aa~ 301 (369)
T 2zc8_A 230 ELSTPICLDESL-TGAEKARKAIELGAGRVF------NVKPARLGGHGESLRVHALAESAGIPLWMGGML-EAGVGRAHN 301 (369)
T ss_dssp HCSSCEEESTTC-CSHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC-CCHHHHHHH
T ss_pred hCCCCEEEcCcc-CCHHHHHHHHHhCCCCEE------EEchhhhCCHHHHHHHHHHHHHcCCcEEecCcc-ccHHHHHHH
Confidence 99 999999986 669999999999999999 999999999999999999999999999999986 66554 45
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
+||| ++
T Consensus 302 ~hla-a~ 307 (369)
T 2zc8_A 302 LHLA-TL 307 (369)
T ss_dssp HHHT-TS
T ss_pred HHHH-cC
Confidence 6666 44
No 90
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=2.4e-39 Score=334.22 Aligned_cols=301 Identities=19% Similarity=0.231 Sum_probs=224.0
Q ss_pred CceeeEEEEEEEe---------cCCC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHH
Q 011677 44 PSVITKIKARQIL---------DSRG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRA 109 (479)
Q Consensus 44 ~~~I~~I~~~~i~---------ds~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~a 109 (479)
+|+|++|+.+.+. .+++ +..+.|+|+|++|++ |+||+.++. +.|++++...+
T Consensus 2 ~MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~----~~~~~e~~~~~ 67 (386)
T 3fv9_G 2 SLKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLT----------GWGESTPFG----STYIAAHAGGT 67 (386)
T ss_dssp -CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCE----------EEEEECCST----TSSSSCCHHHH
T ss_pred CCEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCE----------EEEecccCC----CccCcccHHHH
Confidence 4799999998873 1223 246899999999994 999987642 35777777777
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 110 VKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 110 v~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
...++ .++|.|+|+||.+.+++|+.|.+.. .+ ..+|++|||+||||+.||..|+|||++||| ..+.++|
T Consensus 68 ~~~l~-~l~~~l~G~d~~~~~~~~~~l~~~~----~g--~~~A~said~ALwDl~gk~~g~Pv~~LLGg---~~~~~v~- 136 (386)
T 3fv9_G 68 RAALE-LLAPAILGMDPRQHDRIWDRMRDTL----KG--HRDARAALDIACWDIAAQAAGLPLCDMTGG---RVAGPVP- 136 (386)
T ss_dssp HHHHH-HHHHHHTTSCTTCHHHHHHHHHHHC----SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CCSSCBC-
T ss_pred HHHHH-HHHHHhCCCCcCCHHHHHHHHHHHh----cC--cHHHHHHHHHHHHHHHHHHcCCCHHHHhCC---CCCCcee-
Confidence 77775 5999999999999999999997632 11 157999999999999999999999999998 3344544
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLV 269 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v 269 (479)
.|..++.+ +. +...+++.+...++|+.+| .|.|.. .. ..+..+.++.|
T Consensus 137 -~y~s~~~~-------~~---------e~~~~~a~~~~~~G~~~~K----~Kvg~~-------~~----~~~~~~d~~~v 184 (386)
T 3fv9_G 137 -VISSIGGD-------TP---------EAMRAKVARHRAQGFKGHS----IKIGAS-------EA----EGGPALDAERI 184 (386)
T ss_dssp -EEEEECSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECCCC-------TT----TTHHHHHHHHH
T ss_pred -eeEecCCC-------CH---------HHHHHHHHHHHHCCCCEEE----EeccCC-------CC----CCCHHHHHHHH
Confidence 45543321 11 1123344444444565554 454411 00 01234455555
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH-hhCCceeeecCCCccCHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC-ADYPIVSIEDPFDKEDWEHTK 347 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll-~~~~i~~iEdP~~~~D~~g~~ 347 (479)
+...+.+|.+ ..+ +|+| +.||.++++++. +.+ +++++ |||||++ |+++++
T Consensus 185 ~avR~a~G~~-~~L~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~~i-~iEeP~~--~~~~~~ 236 (386)
T 3fv9_G 185 TACLADRQPG-EWYLADAN-----------------------NGLTVEHALRML-SLLPPGLDI-VLEAPCA--SWAETK 236 (386)
T ss_dssp HHHTTTCCTT-CEEEEECT-----------------------TCCCHHHHHHHH-HHSCSSCCC-EEECCCS--SHHHHH
T ss_pred HHHHHHcCCC-CeEEEECC-----------------------CCCCHHHHHHHH-HHhhccCCc-EEecCCC--CHHHHH
Confidence 4434445755 456 8983 367889999875 457 78999 9999999 899999
Q ss_pred HHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch-
Q 011677 348 SVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED- 425 (479)
Q Consensus 348 ~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d- 425 (479)
+|++++ +||++||+.. ++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+. |+..
T Consensus 237 ~l~~~~~iPIa~dE~~~-~~~~~~~~~~~~a~d~v------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~-es~i~ 308 (386)
T 3fv9_G 237 SLRARCALPLLLDELIQ-TETDLIAAIRDDLCDGV------GLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTV-GSQIS 308 (386)
T ss_dssp HHHTTCCSCEEESTTCC-SHHHHHHHHHTTCCSEE------EEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSS-CCHHH
T ss_pred HHHhhCCCCEEeCCCcC-CHHHHHHHHHhCCCCEE------EECccccCCHHHHHHHHHHHHHcCCEEEeCCCC-CCHHH
Confidence 999999 9999999865 59999999999999999 999999999999999999999999999998875 5544
Q ss_pred -hHHHHhHhhcCC
Q 011677 426 -SFIADLSVGLAS 437 (479)
Q Consensus 426 -~~~~dlAv~~~~ 437 (479)
++.+|||.++..
T Consensus 309 ~aa~~hlaaa~~~ 321 (386)
T 3fv9_G 309 FAAILHLAQSTPR 321 (386)
T ss_dssp HHHHHHHHHTSCT
T ss_pred HHHHHHHHHhCCC
Confidence 566677776654
No 91
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=1.2e-39 Score=337.05 Aligned_cols=303 Identities=17% Similarity=0.157 Sum_probs=220.0
Q ss_pred ceeeEEEEEEEecCCCC----ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHh
Q 011677 45 SVITKIKARQILDSRGI----PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEA 120 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g~----~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~ 120 (479)
|+|++|+++.+.-.... ..+.|+|+|++|++ |+||+..+. ..+.|.++++ .+.+.++|.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~V~v~td~G~~----------G~GE~~~~~--~~p~~~~e~~-----~i~~~l~p~ 63 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLT----------GIGEMSDFS--HLPLYSVDLH-----DLKQGLLSI 63 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCE----------EEEEECCCS--SSSSCCCCHH-----HHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCCcccceEEEEEEECCCCE----------EEecccccc--CCCccchhHH-----HHHHHHHHH
Confidence 69999999988533222 46899999999994 999986531 0134667654 466789999
Q ss_pred hcCCCCCCHHHHHHHHHhhhc-cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCc
Q 011677 121 LVGMDPILQSQIDQAMIDLDK-TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGK 199 (479)
Q Consensus 121 LiG~d~~~~~~id~~l~~~~~-~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~ 199 (479)
|+|+||.+.+++|+.|.+... ......-+.+|++|||+||||+.||.+|+|||++||| ..+.++|+ |..++...
T Consensus 64 liG~d~~~~~~~~~~l~~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~r~~v~~--y~t~~~~~ 138 (391)
T 3gd6_A 64 LLGQNPFDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLGG---RVKEKIKV--CYPIFRHR 138 (391)
T ss_dssp HTTCCTTCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSCSEEEB--CEEECCCS
T ss_pred hCCCCccCHHHHHHHHHHHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhCC---CcCCeEEe--eEEecccc
Confidence 999999999999999986321 1111112468999999999999999999999999998 33455555 44432100
Q ss_pred cCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCC
Q 011677 200 HAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIP 279 (479)
Q Consensus 200 ~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~ 279 (479)
.. . + .+...+++.+...++|+.+| .|.| . +.+.+.+.++.||+++ |.+
T Consensus 139 ~~-~--~---------~e~~~~~a~~~~~~G~~~~K----iKvG-------~------~~~~d~~~v~avR~a~---g~~ 186 (391)
T 3gd6_A 139 FS-E--E---------VESNLDVVRQKLEQGFDVFR----LYVG-------K------NLDADEEFLSRVKEEF---GSR 186 (391)
T ss_dssp ST-T--H---------HHHHHHHHHHHHHTTCCEEE----EECS-------S------CHHHHHHHHHHHHHHH---GGG
T ss_pred cC-C--C---------HHHHHHHHHHHHHcCCCEEE----EeeC-------C------CHHHHHHHHHHHHHHc---CCC
Confidence 00 0 0 01123344444444555544 4433 1 2234566677777666 533
Q ss_pred CCc-e-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCc--eeeecCCCccCHHHHHHHHhhh-h
Q 011677 280 SSK-W-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPI--VSIEDPFDKEDWEHTKSVLQIC-Q 354 (479)
Q Consensus 280 ~~~-i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i--~~iEdP~~~~D~~g~~~L~~~~-~ 354 (479)
.. . +|+| +.||.++++++. +.+++|++ .|||||++++|++++++|++++ +
T Consensus 187 -~~l~~vDan-----------------------~~~~~~~A~~~~-~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~i 241 (391)
T 3gd6_A 187 -VRIKSYDFS-----------------------HLLNWKDAHRAI-KRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDY 241 (391)
T ss_dssp -CEEEEEECT-----------------------TCSCHHHHHHHH-HHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSS
T ss_pred -CcEEEecCC-----------------------CCcCHHHHHHHH-HHHHhcCCCcceecCCCChhhHHHHHHHHHHcCC
Confidence 22 2 5662 467899999875 56899999 9999999999999999999999 9
Q ss_pred hhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhH
Q 011677 355 QVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADLS 432 (479)
Q Consensus 355 ~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlA 432 (479)
|| ||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|++++++|+ .|+.. ++.+|||
T Consensus 242 PI--dE~~-~~~~~~~~~~~~~~~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~i~~aa~~hla 311 (391)
T 3gd6_A 242 PI--SEHV-WSFKQQQEMIKKDAIDIF------NISPVFIGGLTSAKKAAYAAEVASKDVVLGTT-QELSVGTAAMAHLG 311 (391)
T ss_dssp CE--EEEC-CCHHHHHHHHHHTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-CCCHHHHHHHHHHH
T ss_pred Cc--CCCC-CCHHHHHHHHHcCCCCEE------EECchhcCCHHHHHHHHHHHHHcCCEEEecCC-CccHHHHHHHHHHH
Confidence 99 8864 569999999999999999 99999999999999999999999999877664 46655 4556666
Q ss_pred hhcC
Q 011677 433 VGLA 436 (479)
Q Consensus 433 v~~~ 436 (479)
.++.
T Consensus 312 aa~~ 315 (391)
T 3gd6_A 312 CSLT 315 (391)
T ss_dssp TTCS
T ss_pred HhCC
Confidence 6553
No 92
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.8e-39 Score=334.45 Aligned_cols=296 Identities=16% Similarity=0.188 Sum_probs=219.1
Q ss_pred CceeeEEEEEEEe--------cCCC------CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG------IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRA 109 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g------~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~a 109 (479)
||+|++|+.+.+. .+.| ...+.|+|+|++|+ +|+||+.++. +.|.+++...+
T Consensus 2 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~----~~~~~~~~~~~ 67 (378)
T 3eez_A 2 SLKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGI----------TGWGEGTPWG----HTYVPAHGPGI 67 (378)
T ss_dssp -CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCC----------CEEEEECCSC----SSSSSCCHHHH
T ss_pred CcEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCC----------EEEecccCCC----CccCCCcHHHH
Confidence 6899999999883 2223 24689999999998 5999987642 35777777777
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCccccc
Q 011677 110 VKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPV 189 (479)
Q Consensus 110 v~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pv 189 (479)
...++ .++|.|+|+||.+.+++|+.|.+.. .+. .+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 68 ~~~l~-~l~p~l~G~d~~~~~~~~~~l~~~~----~g~--~~A~said~ALwDl~gk~~g~Pl~~LlGg---~~r~~v~~ 137 (378)
T 3eez_A 68 RAGIE-TMAPFVLGLDPRRLLDVERAMDIAL----PGH--LYAKSPIDMACWDIAGQAAGLPIADLMGG---GSRTPRPI 137 (378)
T ss_dssp HHHHH-HHHHHHTTSCTTCHHHHHHHHHHHS----SSC--HHHHHHHHHHHHHHHHHHTTSBHHHHTTC---CCCSCEEB
T ss_pred HHHHH-HHHHHhcCCCcCCHHHHHHHHHHHh----cCc--HHHHHHHHHHHHHHHHHHhCCcHHHHhCC---CCCCeEEE
Confidence 77775 5999999999999999999997631 111 47999999999999999999999999998 33445555
Q ss_pred ceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHH
Q 011677 190 PAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLV 269 (479)
Q Consensus 190 p~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v 269 (479)
|..++++ +. +...+++.+...++|+.+| .|.| + ++++.++.|
T Consensus 138 --~~~~~~~-------~~---------e~~~~~a~~~~~~G~~~iK----iK~G----------~------~~~~d~~~v 179 (378)
T 3eez_A 138 --ASSVGAK-------SV---------EETRAVIDRYRQRGYVAHS----VKIG----------G------DVERDIARI 179 (378)
T ss_dssp --BCCBCSC-------CH---------HHHHHHHHHHHHTTCCEEE----EECC----------S------CHHHHHHHH
T ss_pred --EEEecCC-------CH---------HHHHHHHHHHHhCCCCEEE----eccC----------C------CHHHHHHHH
Confidence 4332211 11 1122333333334454444 3433 1 123445555
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
+...+.+|.+ ..+ +|+| +.||.++++++. +.++++++ |||||++ |++++++
T Consensus 180 ~avR~a~g~~-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i-~iEqP~~--~~~~~~~ 231 (378)
T 3eez_A 180 RDVEDIREPG-EIVLYDVN-----------------------RGWTRQQALRVM-RATEDLHV-MFEQPGE--TLDDIAA 231 (378)
T ss_dssp HHHTTSCCTT-CEEEEECT-----------------------TCCCHHHHHHHH-HHTGGGTC-CEECCSS--SHHHHHH
T ss_pred HHHHHHcCCC-ceEEEECC-----------------------CCCCHHHHHHHH-HHhccCCe-EEecCCC--CHHHHHH
Confidence 4333344644 456 8883 367889999875 55799999 9999998 9999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED-- 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d-- 425 (479)
|++++ +||++||... ++++++++++.+++|++ ++|++++||+|++++++++|+++|++++++|+. |+..
T Consensus 232 l~~~~~iPIa~dE~~~-~~~~~~~~l~~~~~d~v------~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~-es~i~~ 303 (378)
T 3eez_A 232 IRPLHSAPVSVDECLV-TLQDAARVARDGLAEVF------GIKLNRVGGLTRAARMRDIALTHGIDMFVMATG-GSVLAD 303 (378)
T ss_dssp TGGGCCCCEEECTTCC-SHHHHHHHHHTTCCSEE------EEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSS-CSHHHH
T ss_pred HHhhCCCCEEECCCCC-CHHHHHHHHHcCCCCEE------EeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCC-CCHHHH
Confidence 99999 9999999865 59999999999999999 999999999999999999999999999988865 5544
Q ss_pred hHHHHhHhhcCC
Q 011677 426 SFIADLSVGLAS 437 (479)
Q Consensus 426 ~~~~dlAv~~~~ 437 (479)
++.+|||.++..
T Consensus 304 aa~~hlaaa~~~ 315 (378)
T 3eez_A 304 AEALHLAATIPD 315 (378)
T ss_dssp HHHHHHHHTSCG
T ss_pred HHHHHHHHhCCC
Confidence 456777776644
No 93
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=5.6e-39 Score=331.85 Aligned_cols=273 Identities=15% Similarity=0.103 Sum_probs=203.5
Q ss_pred ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhc
Q 011677 62 PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDK 141 (479)
Q Consensus 62 ~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~ 141 (479)
.++.|+|+|++|++ |+||+.. + ..+...+++.++|.|+|+||.+.+++|+.|.+...
T Consensus 59 ~~v~V~v~td~G~~----------G~Ge~~~----------g---~~~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~~ 115 (404)
T 3ekg_A 59 GTLVVEIEASDGNV----------GFAVTTG----------G---EPAAYIVEKHLARFLEGARVTDIERIWDQMYNSTL 115 (404)
T ss_dssp CEEEEEEEETTSCE----------EEEEEEC----------H---HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHG
T ss_pred cEEEEEEEECCCCE----------EEEeCCC----------c---HHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhh
Confidence 35999999999994 9998642 2 23344677889999999999999999999986321
Q ss_pred cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHH
Q 011677 142 TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFG 221 (479)
Q Consensus 142 ~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ 221 (479)
....+++..+|++|||+||||+.||.+|+|||+|||| ..+.++| +|++ |+ ..+
T Consensus 116 ~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~--~y~~--g~--------------------~~~ 168 (404)
T 3ekg_A 116 YYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLGG---AVRDELQ--FYAT--GA--------------------RPD 168 (404)
T ss_dssp GGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---CSSSEEE--EEEE--SS--------------------CHH
T ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHhCCCHHHHcCC---CCCCeeE--EecC--CC--------------------CHH
Confidence 1222335568999999999999999999999999998 3344544 4653 21 011
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeec
Q 011677 222 EALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDL 300 (479)
Q Consensus 222 ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~ 300 (479)
.+. .++|+.+| .|.|.. .. .|. .+++.+.++++.||+++ |.+ ..+ +|+|
T Consensus 169 ~~~---~~Gf~~~K----~Kv~~g---~~-~g~--~~~~~di~~v~avRea~---G~~-~~L~vDaN------------- 218 (404)
T 3ekg_A 169 LAQ---KMGFIGGK----MPLHHG---PS-EGE--EGLKKNLEELATMRERV---GPD-FWLMFDCW------------- 218 (404)
T ss_dssp HHH---HTTCSEEE----EECCCC---GG-GHH--HHHHHHHHHHHHHHHHH---CSS-SEEEEECT-------------
T ss_pred HHH---HcCCCEEE----EecCCC---Cc-ccc--ccHHHHHHHHHHHHHHh---CCC-CeEEecCC-------------
Confidence 222 23465554 343210 00 000 01233455666666665 754 456 9984
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hh--hhcCCccccCHHHHHHHhcCCC
Q 011677 301 DFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQ--VVGDDLLMSNPKRIERATLIPL 377 (479)
Q Consensus 301 ~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~--I~gde~~~t~~~~~~~~i~~~a 377 (479)
+.||.++++++.+ .+++|++.|||||++++|++++++|++++ +| |++||...+ +++++++++.++
T Consensus 219 ----------~~w~~~~A~~~~~-~Le~~~l~~iEeP~~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~-~~~~~~li~~~a 286 (404)
T 3ekg_A 219 ----------MSLDLNYATRLAR-GAREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEHEAT-RWGFRMLLEMGC 286 (404)
T ss_dssp ----------TCCCHHHHHHHHH-HHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTCCH-HHHHHHHHHTTC
T ss_pred ----------CCCCHHHHHHHHH-HHhhcCCcEEecCCCcccHHHHHHHHHhcCCCeEEEecCccCC-HHHHHHHHHcCC
Confidence 3678999998754 57999999999999999999999999999 66 889998654 999999999999
Q ss_pred CceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCC
Q 011677 378 AMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLAS 437 (479)
Q Consensus 378 ~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~ 437 (479)
+|++ |+|++++||||++++++++|+++|++++ .|+++ ...+||+.++..
T Consensus 287 ~dii------~~d~~~~GGitea~kia~lA~a~gv~v~-~h~~~----~a~~hl~aa~pn 335 (404)
T 3ekg_A 287 CDII------QPDVGWCGGVTELLKISALADAHNALVV-PHGSS----VYSYHFVATRQN 335 (404)
T ss_dssp CSEE------CCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCCT----HHHHHHHTTCTT
T ss_pred CCeE------ecChhhcCCccHHHHHHHHHHHcCCEEE-ecCcH----HHHHHHHHhCCC
Confidence 9999 9999999999999999999999999975 56543 367888887644
No 94
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=1.8e-39 Score=336.17 Aligned_cols=298 Identities=17% Similarity=0.126 Sum_probs=216.1
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
||+|++|+.+.+. .|.| ...+.|+|+|++|++ |+||+.. +++ +..
T Consensus 23 mMkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~----------G~GE~~~----------g~~---~~~ 79 (398)
T 4dye_A 23 MMKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVE----------GWGETMW----------GAP---VAA 79 (398)
T ss_dssp CCCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEEEC----------SHH---HHH
T ss_pred CceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCE----------EEEeecC----------chH---HHH
Confidence 8999999998883 3333 346899999999994 9999853 222 233
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccce
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPA 191 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~ 191 (479)
.+ +.++|.|+|+||.+.+.+|+.|.+... ..+..+.+|++|||+||||+.||..|+|||++||| ..+.++|+
T Consensus 80 ~i-~~l~p~liG~d~~~~~~~~~~l~~~~~--~~g~~~~~A~said~ALwDl~gK~~g~Pl~~LLGg---~~r~~v~~-- 151 (398)
T 4dye_A 80 IV-RRMAPDLIGTSPFALEAFHRKQHMVPF--FYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLGG---AVRDEVPI-- 151 (398)
T ss_dssp HH-HHHHHHHTTCCTTCHHHHHHHTTTHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEEB--
T ss_pred HH-HHHHHHHcCCCccCHHHHHHHHHhhhh--hhccccHHHHHHHHHHHHHHHHHHcCCcHHHHcCC---CcCCeEEE--
Confidence 44 679999999999999999998853110 01123468999999999999999999999999998 33455555
Q ss_pred EEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 192 FTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 192 ~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
|..+.. ...++..... ..+...+++.+...+ +|+.+| .|.| .+.+.+.+.++.||
T Consensus 152 y~s~~~-~~~~g~~~~~------~~e~~~~~a~~~~~~~G~~~~K----~KvG-------------~~~~~d~~~v~avR 207 (398)
T 4dye_A 152 TALITR-ADAPGATPAD------LPKAMAEHAVRVVEEGGFDAVK----LKGT-------------TDCAGDVAILRAVR 207 (398)
T ss_dssp EEEECG-GGSTTCCTTT------HHHHHHHHHHHHHHHHCCSEEE----EECC-------------SCHHHHHHHHHHHH
T ss_pred EEEEec-cccCCcccCC------CHHHHHHHHHHHHHhcCCCEEE----EecC-------------CCHHHHHHHHHHHH
Confidence 544311 0000000000 001123344444444 565554 4432 11233455555555
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++ .+ ..+ +|+| +.||.++++++. +.+++|++.|||||++ |++++++|
T Consensus 208 ~~~----~~-~~l~vDaN-----------------------~~w~~~~A~~~~-~~l~~~~i~~iEqP~~--d~~~~~~l 256 (398)
T 4dye_A 208 EAL----PG-VNLRVDPN-----------------------AAWSVPDSVRAG-IALEELDLEYLEDPCV--GIEGMAQV 256 (398)
T ss_dssp HHC----TT-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCCSEEECCSS--HHHHHHHH
T ss_pred HhC----CC-CeEEeeCC-----------------------CCCCHHHHHHHH-HHHhhcCCCEEcCCCC--CHHHHHHH
Confidence 554 22 356 9983 367889999875 5579999999999999 99999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++++ |+.+|+..+..
T Consensus 257 ~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v------~~k~~~~GGit~~~~ia~~A~~~gi~~~~-h~~~e~~i~~a 328 (398)
T 4dye_A 257 KAKVRIPLCTNMCV-VRFEDFAPAMRLNAVDVI------HGDVYKWGGIAATKALAAHCETFGLGMNL-HSGGELGIATA 328 (398)
T ss_dssp HHHCCSCEEESSSC-CSGGGHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEEEE-CCSCCCHHHHH
T ss_pred HhhCCCCEEeCCcC-CCHHHHHHHHHhCCCCEE------EeCccccCCHHHHHHHHHHHHHcCCeEEE-cCCcchHHHHH
Confidence 9999 999999976 559999999999999999 99999999999999999999999999866 55788877766
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
++++++.
T Consensus 329 a~l~laa 335 (398)
T 4dye_A 329 AHLAVVS 335 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
No 95
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=6.3e-39 Score=333.54 Aligned_cols=319 Identities=15% Similarity=0.099 Sum_probs=219.6
Q ss_pred CceeeEEEEEEEecCCCCceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcC
Q 011677 44 PSVITKIKARQILDSRGIPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVG 123 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG 123 (479)
+|+|++|+++.+ +...++.+.|+|+|++|++ |+||+.. .|+.+++. ..+ +.++|.|+|
T Consensus 2 ~MkI~~i~~~~~-~~~~~~~~~V~v~td~G~~----------G~GE~~~-------~~~~~~~~---~~i-~~l~p~liG 59 (409)
T 3go2_A 2 SLKVVSVDTLCC-DAGWRNYHFVKLTTDEGIV----------GWSEFDE-------GFGSPGVT---AVI-EQLGKRLVG 59 (409)
T ss_dssp CCBEEEEEEEEE-ECSSSEEEEEEEEETTCCE----------EEEEECS-------TTTCTTHH---HHH-HHHHHHHTT
T ss_pred CCEEEEEEEEEE-CCCCccEEEEEEEECCCCE----------EEEeecC-------CCCcHHHH---HHH-HHHHHHhcC
Confidence 389999999987 3445678999999999994 9999754 24444443 234 469999999
Q ss_pred CCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCC
Q 011677 124 MDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGN 203 (479)
Q Consensus 124 ~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~ 203 (479)
+||.+++++|+.|.+... ...+++..+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |....+|... .
T Consensus 60 ~d~~~~e~~~~~~~~~~~-~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG---~~r~~v~~--y~s~~~~~~i-~ 132 (409)
T 3go2_A 60 ASVMEHERFFAEAYCLTR-PATGGVVSEGIGAIENALLDAKAKTLNVPCYELLGG---KLRDRVPV--YWSHCPTWRI-N 132 (409)
T ss_dssp SBTTCHHHHHHHHHHHHG-GGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTC---CSCSEEEE--EECSTTHHHH-H
T ss_pred CChhhHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCC---CCCCeEEE--EEeecCcccc-c
Confidence 999999999999986322 223445578999999999999999999999999998 33455554 5432221100 0
Q ss_pred cccc-cceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCc------ccCCCCCCCCCCC-------chHHHHHHH
Q 011677 204 NLAI-QDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGC------NVGEDGGLAPNIS-------SIREGLDLV 269 (479)
Q Consensus 204 ~l~~-~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~------~vg~~G~~~~~~~-------~~~~~l~~v 269 (479)
..+. .+- ....+...+++.+...++|+++| .|.+.... ..|..+.+.+..+ .+.+.++.|
T Consensus 133 ~~~~~~~~--~~~~e~~~~~a~~~~~~Gf~~iK----lKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~av 206 (409)
T 3go2_A 133 HPKFFGPP--VTDLDGVKRTAEEARERQFRAIK----TNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEAL 206 (409)
T ss_dssp CTTTSSSC--CCSHHHHHHHHHHHHHTTCCEEE----ECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccccC--CCCHHHHHHHHHHHHHcCCCEEE----EcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHH
Confidence 0000 000 00001122333333344555554 34310000 0011111222222 123455555
Q ss_pred HHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 270 KEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 270 ~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
|+++ |.+ ..| +|+| +.||.++++++. +.++++++.|||+|+ +|++++++
T Consensus 207 R~av---G~d-~~l~vDaN-----------------------~~~~~~~A~~~~-~~L~~~~i~~iE~P~--~d~~~~~~ 256 (409)
T 3go2_A 207 RDGA---GPD-VEILLDLN-----------------------FNAKPEGYLKIL-RELADFDLFWVEIDS--YSPQGLAY 256 (409)
T ss_dssp HHHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHH-HHTTTSCCSEEECCC--SCHHHHHH
T ss_pred HHHh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHhhcCCeEEEeCc--CCHHHHHH
Confidence 5555 654 456 8883 367899999875 557999999999997 49999999
Q ss_pred HHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--
Q 011677 349 VLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED-- 425 (479)
Q Consensus 349 L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d-- 425 (479)
|++++ +||++||+.. ++++++++++.+++|++ ++|+++ ||||++++++++|+++|+++++ |+ .++..
T Consensus 257 l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v------~~k~~~-GGit~~~~ia~~A~~~gi~~~~-h~-~~s~i~~ 326 (409)
T 3go2_A 257 VRNHSPHPISSCETLF-GIREFKPFFDANAVDVA------IVDTIW-NGVWQSMKIAAFADAHDINVAP-HN-FYGHLCT 326 (409)
T ss_dssp HHHTCSSCEEECTTCC-HHHHHHHHHHTTCCSEE------EECHHH-HCHHHHHHHHHHHHHTTCEEEE-CC-CSCHHHH
T ss_pred HHhhCCCCEEeCCCcC-CHHHHHHHHHhCCCCEE------EeCCCC-CCHHHHHHHHHHHHHcCCEEee-cC-CCcHHHH
Confidence 99999 9999999865 59999999999999999 999999 9999999999999999999875 76 46644
Q ss_pred hHHHHhHhhcCC
Q 011677 426 SFIADLSVGLAS 437 (479)
Q Consensus 426 ~~~~dlAv~~~~ 437 (479)
++.+||+.++..
T Consensus 327 aa~~hlaaa~p~ 338 (409)
T 3go2_A 327 MINANFAAAVPN 338 (409)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHcCCC
Confidence 456777776643
No 96
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=8.6e-39 Score=333.70 Aligned_cols=273 Identities=18% Similarity=0.171 Sum_probs=203.9
Q ss_pred ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhc
Q 011677 62 PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDK 141 (479)
Q Consensus 62 ~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~ 141 (479)
++|.|+|+|++|++ |+||+.. + ..++..+.+.++|.|+|+||.+++++|+.|++...
T Consensus 65 ~~vlV~V~tddGi~----------G~Ge~~~----------~---~~~~~~i~~~lap~LiG~dp~~ie~i~~~m~~~~~ 121 (455)
T 3fxg_A 65 GSFLVEIEATDGTV----------GFATGFG----------G---PPACWLVHQHFERFLIGADPRNTNLLFEQMYRASM 121 (455)
T ss_dssp CEEEEEEEETTSCE----------EEEEEEC----------H---HHHHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHTT
T ss_pred eEEEEEEEECCCCE----------EEEeCcC----------C---HHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHhhh
Confidence 35999999999994 9998642 1 23445677889999999999999999999986321
Q ss_pred cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHH
Q 011677 142 TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFG 221 (479)
Q Consensus 142 ~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ 221 (479)
...+.+...+|++|||+||||+.||.+|+|||+|||| ..+.++|+ |+. |+ ..+
T Consensus 122 ~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG---~~rd~vp~--y~~--g~--------------------~~~ 174 (455)
T 3fxg_A 122 FYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGG---ATKERLDF--YCT--GP--------------------EPT 174 (455)
T ss_dssp TTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTC---CSCSEEEE--EEE--SS--------------------CHH
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhCC---ccCCeeEE--eec--CC--------------------CHH
Confidence 1122334467999999999999999999999999998 33455555 543 21 011
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeec
Q 011677 222 EALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDL 300 (479)
Q Consensus 222 ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~ 300 (479)
.+ ..++|+.+| .|.|... .+|. .+.+.+.++++.||+++ |.+ ..| +|+|
T Consensus 175 ~~---~~~Gf~~~K----lKv~~~~----~~G~--~~~~~di~rv~avRea~---G~d-~~L~vDaN------------- 224 (455)
T 3fxg_A 175 AA---KAMGFWGGK----VPLPFCP----DDGH--EGLRKNVEFLRKHREAV---GPD-FPIMVDCY------------- 224 (455)
T ss_dssp HH---HHHTCSCEE----EECCCCG----GGHH--HHHHHHHHHHHHHHHHH---CSS-SCEEEECT-------------
T ss_pred HH---HHcCCCEEE----EcCCCCc----cccc--ccHHHHHHHHHHHHHHh---CCC-CeEEEeCC-------------
Confidence 22 234566555 3432100 0010 01123455555565555 755 456 9984
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCC
Q 011677 301 DFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLA 378 (479)
Q Consensus 301 ~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~ 378 (479)
+.||.++++++. +.+++|+|.|||||++++|++++++|++++ +||++||+..+ +++++++++.+++
T Consensus 225 ----------~~wt~~~Ai~~~-~~Le~~~l~~iEEPl~~dd~~~la~L~~~~~~iPIA~gEs~~s-~~d~~~li~~~av 292 (455)
T 3fxg_A 225 ----------MSLNVSYTIELV-KACLDLNINWWEECLSPDDTDGFALIKRAHPTVKFTTGEHEYS-RYGFRKLVEGRNL 292 (455)
T ss_dssp ----------TCCCHHHHHHHH-HHTGGGCCSEEECCSCGGGGGGHHHHHHHCTTSEEEECTTCCH-HHHHHHHHTTCCC
T ss_pred ----------CCCCHHHHHHHH-HhcccCCcceecCCCCcchHHHHHHHHHhCCCCeEECCCccCC-HHHHHHHHHcCCC
Confidence 367899999875 558999999999999999999999999987 79999998655 9999999999999
Q ss_pred ceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCC
Q 011677 379 MLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLAS 437 (479)
Q Consensus 379 d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~ 437 (479)
|++ |+|++++||||++++++++|+++|+++ ++|.++ ...+||+.++.+
T Consensus 293 Dii------q~d~~~~GGItea~kIa~lA~a~Gv~v-~~H~~~----~aslHlaaa~pn 340 (455)
T 3fxg_A 293 DII------QPDVMWLGGLTELLKVAALAAAYDVPV-VPHASG----PYSYHFQISQPN 340 (455)
T ss_dssp SEE------CCCTTTSSCHHHHHHHHHHHHTTTCCB-CCCSCT----HHHHHHHTTCTT
T ss_pred CEE------EECccccCCHHHHHHHHHHHHHcCCEE-EecchH----HHHHHHHHhCCC
Confidence 999 999999999999999999999999997 557653 467888888744
No 97
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=1.2e-38 Score=328.72 Aligned_cols=293 Identities=17% Similarity=0.146 Sum_probs=219.9
Q ss_pred ceeeEEEEEEEec---------CCC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 45 SVITKIKARQILD---------SRG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 45 ~~I~~I~~~~i~d---------s~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
|+|++|+.+.+.- +.+ .++++|+|+|++|+ +|+||+.++. +.|.++++.++.
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~----------~G~GE~~~~~----~~~~~~~~~~~~ 68 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGL----------QGCGEFTPCG----ENYMIAHSEGVD 68 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSC----------EEEEEEBCSS----TTSSSCCTTHHH
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCC----------EEEEEeecCC----CCcCCCCHHHHH
Confidence 7999999988731 122 24689999999998 4999987641 357777777777
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
..|+ .++|.|+|+||.+++.+|+.|... . ++ ..+|++|||+||||+.||..|+|||++||| ..+.+ +|
T Consensus 69 ~~i~-~l~~~l~g~d~~~~~~~~~~l~~~---~-~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~~--v~ 136 (379)
T 2rdx_A 69 AFAR-LAAPQLLGQDPRQVARMERLMDHL---V-QG--HGYAKAPFDAAFWDILGQATGQPVWMLLGG---KLCDG--AP 136 (379)
T ss_dssp HHHH-HHHHHHTTSCTTCHHHHHHHHHHH---S-SS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTS---CCCSS--EE
T ss_pred HHHH-HHHHHHcCCChhhHHHHHHHHHHH---h-cc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcCC---CCCCc--ee
Confidence 7787 899999999999999999998431 1 12 468999999999999999999999999998 33344 45
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+|.+++.+ +.+ ...+++.+...++|+.+| .|.| . + ....++.|+
T Consensus 137 ~~~~~~~~-------~~~---------~~~~~a~~~~~~Gf~~iK----ik~g-------~------~---~~~~~e~v~ 180 (379)
T 2rdx_A 137 MYRVAPQR-------SEA---------ETRAELARHRAAGYRQFQ----IKVG-------A------D---WQSDIDRIR 180 (379)
T ss_dssp BCEECCCS-------CSH---------HHHHHHHHHHHTTCCEEE----EECC-------S------C---HHHHHHHHH
T ss_pred EEEEecCC-------CHH---------HHHHHHHHHHHcCCCEEE----Eecc-------C------C---HHHHHHHHH
Confidence 45543211 111 123444444444554444 3322 1 1 233444443
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
...+.+|.+ ..+ +|++ +.||.++++++. +.++++++ |||||++ |++++++|
T Consensus 181 avr~a~g~d-~~l~vDan-----------------------~~~~~~~a~~~~-~~l~~~~i-~iE~P~~--~~~~~~~l 232 (379)
T 2rdx_A 181 ACLPLLEPG-EKAMADAN-----------------------QGWRVDNAIRLA-RATRDLDY-ILEQPCR--SYEECQQV 232 (379)
T ss_dssp HHGGGSCTT-CEEEEECT-----------------------TCSCHHHHHHHH-HHTTTSCC-EEECCSS--SHHHHHHH
T ss_pred HHHHhcCCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhCCe-EEeCCcC--CHHHHHHH
Confidence 333345644 445 8873 357889999876 55899999 9999998 99999999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHH
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFI 428 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~ 428 (479)
++++ +||++||.. +++++++++++.+++|+| ++|++++||+|++++++++|+++|+++|+++ +.|+..+..
T Consensus 233 ~~~~~iPI~~de~i-~~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~-~~es~i~~~ 304 (379)
T 2rdx_A 233 RRVADQPMKLDECV-TGLHMAQRIVADRGAEIC------CLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWGGEIASA 304 (379)
T ss_dssp HTTCCSCEEECTTC-CSHHHHHHHHHHTCCSEE------EEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBCSHHHHH
T ss_pred HhhCCCCEEEeCCc-CCHHHHHHHHHcCCCCEE------EEeccccCCHHHHHHHHHHHHHcCCeEEEee-ccCcHHHHH
Confidence 9999 999999976 569999999999999999 9999999999999999999999999987754 568887766
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
++++++.
T Consensus 305 a~~~laa 311 (379)
T 2rdx_A 305 AVAHFAA 311 (379)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555554
No 98
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.9e-39 Score=330.96 Aligned_cols=294 Identities=15% Similarity=0.134 Sum_probs=217.9
Q ss_pred CceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccc-cHHHHH
Q 011677 44 PSVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGN-SVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~-~~~~av 110 (479)
||+|++|+.+.+. .+.+ +++++|+|+|++|++ |+||+. +++ +. +.
T Consensus 3 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~----------G~Ge~~----------~~~~~~--~~ 60 (384)
T 2pgw_A 3 LVKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTV----------GIGECT----------VAPDQT--GT 60 (384)
T ss_dssp -CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCE----------EEEEEE----------CTTCHH--HH
T ss_pred CCEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCE----------EEEccC----------CCchHH--HH
Confidence 6799999998772 3333 357999999999984 999985 122 23 56
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHH-HHhhhccCCCCc---h-hhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCc
Q 011677 111 KNINERISEALVGMDPILQSQIDQA-MIDLDKTEKKGE---L-GANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNL 185 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~-l~~~~~~~~~~~---~-g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~ 185 (479)
..|++.++|.|+|+||.+++.+|+. |++ .+.+.++ . ..+|++|||+||||+.||..|+|||++||| ..+.
T Consensus 61 ~~i~~~l~~~l~g~d~~~~~~~~~~~l~~--~~~~~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~ 135 (384)
T 2pgw_A 61 AAILYRLAKHLVGHSPHDVAPLIARIFHQ--EYLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLGG---AHRK 135 (384)
T ss_dssp HHHHHHHHGGGTTSCGGGHHHHHHHHHHH--HTGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTC---CSSS
T ss_pred HHHHHHHHHHHCCCChhHHHHHHHHHHHH--HhhhcccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcCC---CCCC
Confidence 6687789999999999999999998 853 1212222 1 468999999999999999999999999998 3234
Q ss_pred ccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHH
Q 011677 186 TLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREG 265 (479)
Q Consensus 186 ~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~ 265 (479)
+ +|+|.+++++ +.++ ..+++.+...++|+.+| .|.| + +.+.+.+.
T Consensus 136 ~--v~~~~~~~~~-------~~e~---------~~~~a~~~~~~Gf~~iK----ik~g----------~---~~~~~~e~ 180 (384)
T 2pgw_A 136 A--VGYFYFLQGE-------TAEE---------LARDAAVGHAQGERVFY----LKVG----------R---GEKLDLEI 180 (384)
T ss_dssp E--EEBCEECCCS-------SHHH---------HHHHHHHHHHTTCCEEE----EECC----------S---CHHHHHHH
T ss_pred c--eEEEEECCCC-------CHHH---------HHHHHHHHHHcCCCEEE----ECcC----------C---CHHHHHHH
Confidence 4 5556554321 1222 23344444444454444 2322 1 12223444
Q ss_pred HHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHH
Q 011677 266 LDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWE 344 (479)
Q Consensus 266 l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~ 344 (479)
++.||+ .+| + ..+ +|++ +.||.++++++. +.+++|++.|||||++++|++
T Consensus 181 v~avr~---a~g-d-~~l~vD~n-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~~~~ 231 (384)
T 2pgw_A 181 TAAVRG---EIG-D-ARLRLDAN-----------------------EGWSVHDAINMC-RKLEKYDIEFIEQPTVSWSIP 231 (384)
T ss_dssp HHHHHT---TST-T-CEEEEECT-----------------------TCCCHHHHHHHH-HHHGGGCCSEEECCSCTTCHH
T ss_pred HHHHHH---HcC-C-cEEEEecC-----------------------CCCCHHHHHHHH-HHHHhcCCCEEeCCCChhhHH
Confidence 444444 346 5 456 8873 356889999875 568999999999999999999
Q ss_pred HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCC
Q 011677 345 HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGET 423 (479)
Q Consensus 345 g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get 423 (479)
++++|++++ +||++||... ++++++++++.+++|+| ++|++++||+|++++++++|+++|++++++ ++.|+
T Consensus 232 ~~~~l~~~~~iPI~~de~i~-~~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~-~~~es 303 (384)
T 2pgw_A 232 AMAHVREKVGIPIVADQAAF-TLYDVYEICRQRAADMI------CIGPREIGGIQPMMKAAAVAEAAGLKICIH-SSFTT 303 (384)
T ss_dssp HHHHHHHHCSSCEEESTTCC-SHHHHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCCEEEC-CCSCC
T ss_pred HHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCCEE------EEcchhhCCHHHHHHHHHHHHHCCCeEeec-cCcCC
Confidence 999999999 9999999864 69999999999999999 999999999999999999999999998665 55787
Q ss_pred chh--HHHHhHhhcC
Q 011677 424 EDS--FIADLSVGLA 436 (479)
Q Consensus 424 ~d~--~~~dlAv~~~ 436 (479)
..+ +.+|||.++.
T Consensus 304 ~i~~aa~~hlaaa~~ 318 (384)
T 2pgw_A 304 GITTCAEHHIGLAIP 318 (384)
T ss_dssp HHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhCC
Confidence 665 4667776653
No 99
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=5.4e-39 Score=336.29 Aligned_cols=318 Identities=11% Similarity=0.054 Sum_probs=215.7
Q ss_pred HHHHHHhhhcC--CceeeEEEEEEEecC-------CC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCC
Q 011677 33 LFISNHMRKAV--PSVITKIKARQILDS-------RG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDK 98 (479)
Q Consensus 33 ~~l~~~~~~~~--~~~I~~I~~~~i~ds-------~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~ 98 (479)
|.-..||.+.+ +|+|++|+++.+.-. .| ...+.|+|+|++|++ |+||+.
T Consensus 14 ~~~~~~~~~~~~~~mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~G~~----------G~GE~~------- 76 (445)
T 3vdg_A 14 GTENLYFQSMAHNRIRITGARVTPVAFADPPLLNTVGVHQPYALRAVIQLDTDAGLT----------GLGETY------- 76 (445)
T ss_dssp --------CCGGGCCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCE----------EEEEEC-------
T ss_pred CcccccccccCCCCCEEEEEEEEEEecCCccccccccccccceeEEEEEEEECCCCe----------EEEeCC-------
Confidence 33445565533 689999999998422 11 234889999999994 999973
Q ss_pred CccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhh-ccC------CCC-----chhhhHHHHHHHHHHHHHHH
Q 011677 99 GTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLD-KTE------KKG-----ELGANAILAVSIAACKAGAA 166 (479)
Q Consensus 99 ~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~-~~~------~~~-----~~g~~A~~AvsiAl~da~ak 166 (479)
+++ .....| +.++|.|+|+||.+.+++|+.|.+.. +.. .++ .+...|++|||+||||+.||
T Consensus 77 ---g~~---~~~~~i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK 149 (445)
T 3vdg_A 77 ---ADT---VHLERL-QAAAHAIVGRSVFSTNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQ 149 (445)
T ss_dssp ---CCH---HHHHHH-HHHHHHHTTCBTTCHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ---ChH---HHHHHH-HHHHHHhCCCChhhHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 222 233345 46999999999999999999998742 111 011 14457999999999999999
Q ss_pred hcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCC
Q 011677 167 EKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAH 245 (479)
Q Consensus 167 ~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~ 245 (479)
.+|+|||+|||| ..+.++|+..|....-. ..++..+ .....+...+...+++.+...+ +|+++| .|.|
T Consensus 150 ~~g~Pv~~LLGG---~~r~~v~~~a~~~~~~~-~~~g~~~-~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG-- 218 (445)
T 3vdg_A 150 VTGRPVSDLLGG---AVRDAVPFSAYLFYKWA-AHPGAEP-DGWGAALDPDGIVAQARRMIDEYGFSAIK----LKGG-- 218 (445)
T ss_dssp HHTCBGGGGTTC---CSSSEEEBCEEEECBCS-SSTTSCC-CSSCCBCSHHHHHHHHHHHHHHHCCSSEE----EECS--
T ss_pred HcCCcHHHHhCC---CCCCeEEEeeeeccccc-ccCCccc-cccccCCCHHHHHHHHHHHHHhcCCCEEE----ECCC--
Confidence 999999999998 44567777544321100 0000000 0000000111223333333332 555554 4533
Q ss_pred CcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHH
Q 011677 246 GCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKE 324 (479)
Q Consensus 246 ~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ 324 (479)
. .+.+++.++++.||+++ .+ ..| +|+| +.||.++++++. +
T Consensus 219 --------~--~~~~~Di~~v~avRea~----~d-~~L~vDaN-----------------------~~w~~~~Ai~~~-~ 259 (445)
T 3vdg_A 219 --------V--FAPEEEMAAVEALRAAF----PD-HPLRLDPN-----------------------AAWTPQTSVKVA-A 259 (445)
T ss_dssp --------S--SCHHHHHHHHHHHHHHC----TT-SCEEEECT-----------------------TCSCHHHHHHHH-H
T ss_pred --------C--CCHHHHHHHHHHHHHhC----CC-CcEEEECC-----------------------CCCCHHHHHHHH-H
Confidence 1 11233455555565555 22 356 9983 467899999875 4
Q ss_pred HHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHH
Q 011677 325 LCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEV 403 (479)
Q Consensus 325 ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i 403 (479)
.+++| +.|||||++ |++++++|++++ +||++||+. +++++++++++.+++|++ ++|++++||||+++++
T Consensus 260 ~L~~~-l~~iEeP~~--~~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~l~~~a~div------~~d~~~~GGitea~ki 329 (445)
T 3vdg_A 260 GLEGV-LEYLEDPTP--GLDGMAEVAAQAPMPLATNMCV-VAFDQLPAAVAKNSVQVV------LSDHHYWGGLQRSRLL 329 (445)
T ss_dssp HTTTT-CSEEECCSS--SHHHHHHHHHHCSSCEEESSSC-CSGGGHHHHHHHTCCSEE------EECHHHHTSHHHHHHH
T ss_pred HHhhH-HHeeeCCCC--CHHHHHHHHhcCCCCEEcCCcC-CCHHHHHHHHHcCCCCEE------eeCcceeCCHHHHHHH
Confidence 57999 999999995 899999999999 999999975 569999999999999999 9999999999999999
Q ss_pred HHHHhhCCCeEEEecCCCCCchh--HHHHhHhhc
Q 011677 404 VKLANDVPWGVVISHRSGETEDS--FIADLSVGL 435 (479)
Q Consensus 404 ~~~A~~~g~~~~v~h~~get~d~--~~~dlAv~~ 435 (479)
+++|+++|+++ ++|...|+..+ +.+|||.++
T Consensus 330 a~lA~~~gv~v-~~h~~~e~~i~~aa~~hlaaa~ 362 (445)
T 3vdg_A 330 AGICDTFGLGL-SMHSNSHLGISLAAMVHLAAAT 362 (445)
T ss_dssp HHHHHHHTCEE-EECCCSCCHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCEE-EEeCCcchHHHHHHHHHHHHhC
Confidence 99999999996 56777776554 455777654
No 100
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=1.1e-38 Score=333.83 Aligned_cols=306 Identities=14% Similarity=0.117 Sum_probs=213.4
Q ss_pred CceeeEEEEEEEec-------CCC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQILD-------SRG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~d-------s~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+++.+.- +.| ...+.|+|+|++|++ |+||+. +++ ....
T Consensus 22 ~mkI~~i~~~~v~~P~~~~~~~~g~~~~~~~~~~V~v~td~G~~----------G~GE~~----------g~~---~v~~ 78 (441)
T 3vc5_A 22 SMLIREVRVTPVAFRDPPLLNAAGVHQPWALRTIVEVVTDEGIT----------GLGETY----------GDL---AHLE 78 (441)
T ss_dssp -CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTCCE----------EEEEEE----------CCH---HHHH
T ss_pred CcEEEEEEEEEEecCCcccccccCccccceeEEEEEEEECCCCE----------EEEeCC----------ChH---HHHH
Confidence 78999999999842 222 234899999999994 999974 222 2333
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhh-cc------CCCC-----chhhhHHHHHHHHHHHHHHHhcCchhHHHHhcc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLD-KT------EKKG-----ELGANAILAVSIAACKAGAAEKEVPLYKHIADL 179 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~-~~------~~~~-----~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~ 179 (479)
.| +.++|.|+|+||.+.+++|+.|.+.. +. +.++ .+...|++|||+||||+.||.+|+|||+||||
T Consensus 79 ~i-~~l~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG- 156 (441)
T 3vc5_A 79 QV-RAAAARLPGLDVYALHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLGG- 156 (441)
T ss_dssp HH-HHHHHTCTTSBTTCHHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTC-
T ss_pred HH-HHHHHHhCCCChhHHHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC-
Confidence 45 46999999999999999999998642 11 0011 03457999999999999999999999999998
Q ss_pred cCCCCcccccceEEeecCCccCCC-cccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCC
Q 011677 180 AGKTNLTLPVPAFTVISGGKHAGN-NLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAP 257 (479)
Q Consensus 180 ~~~~~~~~Pvp~~~~i~GG~~~~~-~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~ 257 (479)
..+.++|+..|....-..+.+. ....- .+...+...+++.+...+ +|+.+| .|.| . .
T Consensus 157 --~~rd~v~~~a~~~~~~~~~~g~~~~~~~---~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG----------~--~ 215 (441)
T 3vc5_A 157 --KVRDAVPYSAYLFYKWAGHPGKPEDRFG---PALDPDGIVAQARLLIGEYGFRSIK----LKGG----------V--F 215 (441)
T ss_dssp --CSSSEEEBCEEEECBCSBCTTSCBCTTC---CBCSHHHHHHHHHHHHHHHCCSSEE----EECS----------S--S
T ss_pred --CCCCeEEEEEeeccccccCCCccccccc---cCCCHHHHHHHHHHHHHhcCCCEEE----EccC----------C--C
Confidence 4456777754432110000000 00000 000111223333333332 555544 4533 1 1
Q ss_pred CCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeec
Q 011677 258 NISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIED 336 (479)
Q Consensus 258 ~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEd 336 (479)
+.+++.+++++||+++ .+ .+| +|+| +.||.++++++. +.+++| +.||||
T Consensus 216 ~~~~Di~rv~avRea~----pd-~~L~vDaN-----------------------~~w~~~~Ai~~~-~~L~~~-l~~iEe 265 (441)
T 3vc5_A 216 PPEQEAEAIQALRDAF----PG-LPLRLDPN-----------------------AAWTVETSIRVG-RALDGV-LEYLED 265 (441)
T ss_dssp CHHHHHHHHHHHHHHS----TT-CCEEEECT-----------------------TCSCHHHHHHHH-HHTTTT-CSEEEC
T ss_pred CHHHHHHHHHHHHHhC----CC-CcEeccCC-----------------------CCCCHHHHHHHH-HHHHHH-HHHhhc
Confidence 1233455666666555 22 356 9983 467899999875 457999 999999
Q ss_pred CCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEE
Q 011677 337 PFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVV 415 (479)
Q Consensus 337 P~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~ 415 (479)
|++ |++++++|++++ +||++||+. +++++++++++.+++|++ |+|++++||||++++++++|+++|+++
T Consensus 266 P~~--~~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~l~~~a~dii------~~d~~~~GGitea~kia~lA~~~gv~v- 335 (441)
T 3vc5_A 266 PTP--GIDGMARVAAEVPMPLATNMCV-VTPEHLPAAVERRPIGVL------LIDHHYWGGLVRSAHIATLCATFGIEL- 335 (441)
T ss_dssp CSS--SHHHHHHHHTTSSSCEEESSSC-CSGGGHHHHHHHCCCSEE------EECHHHHTSHHHHHHHHHHHHHTTCEE-
T ss_pred cCC--CHHHHHHHHhcCCCCEEeCCCC-CCHHHHHHHHHhCCCCEE------eechhhcCCHHHHHHHHHHHHHcCCEE-
Confidence 995 899999999999 999999975 569999999999999999 999999999999999999999999997
Q ss_pred EecCCCCCchh--HHHHhHhhc
Q 011677 416 ISHRSGETEDS--FIADLSVGL 435 (479)
Q Consensus 416 v~h~~get~d~--~~~dlAv~~ 435 (479)
+.|...|+..+ +.+|||.++
T Consensus 336 ~~h~~~e~~i~~aa~~hlaaa~ 357 (441)
T 3vc5_A 336 SMHSNSHLGISLAAMTHLAAAT 357 (441)
T ss_dssp EECCCSCCHHHHHHHHHHHHTC
T ss_pred EecCCcccHHHHHHHHHHHHhC
Confidence 45767776554 445776654
No 101
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=4.8e-39 Score=332.97 Aligned_cols=300 Identities=17% Similarity=0.157 Sum_probs=218.4
Q ss_pred CceeeEEEEEEEe------cCC----CCceEEEEEEeC---CCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQIL------DSR----GIPTVEVDLFTH---KGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~------ds~----g~~~v~V~v~t~---~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
+|+|++|+...+- ++. .++++.|+|+|+ +|++ |+||+.. .+.++++ .
T Consensus 5 ~mkI~~i~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~----------G~GE~~~-------~~~~~~~---~ 64 (392)
T 1tzz_A 5 SVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKR----------VVGYGFN-------SNGRYGQ---G 64 (392)
T ss_dssp -CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSE----------EEEEEEC-------CTTSCCC---H
T ss_pred CcEEeEEEEEEecCCCcccccccccCcceEEEEEEEECCCCCCCE----------EEEEecC-------CCchHHH---H
Confidence 4799999965552 121 245799999999 9984 9999864 1233333 3
Q ss_pred HHHHHHHHHhhcCCCC----------CCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHh---
Q 011677 111 KNINERISEALVGMDP----------ILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIA--- 177 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~----------~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLg--- 177 (479)
..+++.++|.|+|+|+ .+++.+|+.|.+.....+++ +..+|++|||+||||+.||..|+|||++||
T Consensus 65 ~~i~~~l~~~l~G~d~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~~~ 143 (392)
T 1tzz_A 65 GLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHG-ERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERH 143 (392)
T ss_dssp HHHHHTHHHHHHTSCGGGSBCTTSSSBCHHHHHHHHTTTCCSCCCS-HHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCchhhhcccccccCHHHHHHHHHHhccccCcc-HHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCcc
Confidence 4466679999999999 99999999998755443433 678999999999999999999999999999
Q ss_pred -cccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCC
Q 011677 178 -DLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLA 256 (479)
Q Consensus 178 -g~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~ 256 (479)
| .. +.++|+|++ +|+.|.+ .+.+ ...+++.+...++|+.+| .|. |.
T Consensus 144 ~g---~~--~~~v~~y~~-~~~~~~~--~~~~---------~~~~~a~~~~~~Gf~~iK----ik~-------g~----- 190 (392)
T 1tzz_A 144 GV---KA--NPRVFVYAA-GGYYYPG--KGLS---------MLRGEMRGYLDRGYNVVK----MKI-------GG----- 190 (392)
T ss_dssp TS---CC--CCEEEEEEE-CCCC------CHH---------HHHHHHHHHHTTTCSEEE----EEC-------SS-----
T ss_pred CC---Cc--CCCeeEEEe-CCcccCC--CCHH---------HHHHHHHHHHHcCCCEEE----EcC-------CC-----
Confidence 6 22 335666775 3332221 0111 123333333334444443 232 21
Q ss_pred CCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeee
Q 011677 257 PNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIE 335 (479)
Q Consensus 257 ~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iE 335 (479)
.+.+.+.+.++.||+++ |.+ ..+ +|+| +.||.+++++++. .+++|+|.|||
T Consensus 191 ~~~~~~~e~v~avr~a~---g~~-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~~i~~iE 242 (392)
T 1tzz_A 191 APIEEDRMRIEAVLEEI---GKD-AQLAVDAN-----------------------GRFNLETGIAYAK-MLRDYPLFWYE 242 (392)
T ss_dssp SCHHHHHHHHHHHHHHH---TTT-CEEEEECT-----------------------TCCCHHHHHHHHH-HHTTSCCSEEE
T ss_pred CCHHHHHHHHHHHHHhc---CCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHHcCCCeec
Confidence 12334456666666666 644 456 8883 3578899998865 48999999999
Q ss_pred cCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCC----CCceecccCCCCcCccccccHHHHHHHHHHHhhC
Q 011677 336 DPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIP----LAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDV 410 (479)
Q Consensus 336 dP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~----a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~ 410 (479)
||++++|+++|++|++++ +||++||+. +++++++++++.+ ++|++ ++|++++||||++++++++|+++
T Consensus 243 qP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~ 315 (392)
T 1tzz_A 243 EVGDPLDYALQAALAEFYPGPMATGENL-FSHQDARNLLRYGGMRPDRDWL------QFDCALSYGLCEYQRTLEVLKTH 315 (392)
T ss_dssp CCSCTTCHHHHHHHTTTCCSCEEECTTC-CSHHHHHHHHHHSCCCTTTCEE------CCCTTTTTCHHHHHHHHHHHHHT
T ss_pred CCCChhhHHHHHHHHhhCCCCEEECCCC-CCHHHHHHHHHcCCCccCCcEE------EECccccCCHHHHHHHHHHHHHC
Confidence 999999999999999999 999999976 6699999999999 99999 99999999999999999999999
Q ss_pred CCe---EEEecCCCCCchhHHHHhHhhcCC
Q 011677 411 PWG---VVISHRSGETEDSFIADLSVGLAS 437 (479)
Q Consensus 411 g~~---~~v~h~~get~d~~~~dlAv~~~~ 437 (479)
|++ +++++ . + ...+|++.++..
T Consensus 316 gi~~~~~~~~~-~---~-~~~~hl~aa~~~ 340 (392)
T 1tzz_A 316 GWSPSRCIPHG-G---H-QMSLNIAAGLGL 340 (392)
T ss_dssp TCCGGGBCCSC-C---B-HHHHHHHHHHTC
T ss_pred CCCCceEeecH-H---H-HHHHHHHHhCCC
Confidence 999 87652 1 1 123788877754
No 102
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=1.8e-38 Score=333.49 Aligned_cols=288 Identities=19% Similarity=0.177 Sum_probs=212.2
Q ss_pred CceeeEEEEEEEecCC--------------CCceEEEEEEeCC--CceeeecCCCCCCCceeeeeeccCCCCccccccHH
Q 011677 44 PSVITKIKARQILDSR--------------GIPTVEVDLFTHK--GMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVN 107 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~--------------g~~~v~V~v~t~~--G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~ 107 (479)
||+|++|+++.+.-.. ...++.|+|+|++ |++ |+||+... |.+.+
T Consensus 1 mmkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~----------G~Ge~~~~---------g~~~~ 61 (441)
T 2hxt_A 1 MRTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLA----------GYGLVFTI---------GRGND 61 (441)
T ss_dssp -CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCE----------EEEEEEEC---------STTHH
T ss_pred CCcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCE----------EEEeecCC---------CCCcH
Confidence 7899999999883110 1246999999998 984 99998653 11233
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHH----HHHHHHhhhccCCC---CchhhhHHHHHHHHHHHHHHHhcCchhHHHHhccc
Q 011677 108 RAVKNINERISEALVGMDPILQSQ----IDQAMIDLDKTEKK---GELGANAILAVSIAACKAGAAEKEVPLYKHIADLA 180 (479)
Q Consensus 108 ~av~~i~~~l~p~LiG~d~~~~~~----id~~l~~~~~~~~~---~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~ 180 (479)
.+...++ .++|.|+|+|+.+++. +|+.|...+.+.+. .++..+|++|||+||||++||..|+|||+||||.
T Consensus 62 ~v~~~i~-~l~~~liG~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGG~- 139 (441)
T 2hxt_A 62 VQTAAVA-ALAEHVVGLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAEL- 139 (441)
T ss_dssp HHHHHHH-TTHHHHTTCBHHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTS-
T ss_pred HHHHHHH-HHHHHHcCCChHHHHhhHHHHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCC-
Confidence 3344454 6899999999998764 67777542211111 2334689999999999999999999999999983
Q ss_pred CCCCc---------------------------------------ccccceEEeecCCccCCCcccccceeeccCCCCcHH
Q 011677 181 GKTNL---------------------------------------TLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSFG 221 (479)
Q Consensus 181 ~~~~~---------------------------------------~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ 221 (479)
.+. +-++|+|++..|+. + .+.+ ...+
T Consensus 140 --~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~--~--~~~e---------~~~~ 204 (441)
T 2hxt_A 140 --TPEQLVDTIDFRYLSDALTRDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWL--G--YSDE---------KLVR 204 (441)
T ss_dssp --CHHHHHHHCCCTTCTTTCCHHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECT--T--SCHH---------HHHH
T ss_pred --CcccccccccccccccccchhhhhhhhhcccccchhhhhhcccCCcceeEeccccc--C--CCHH---------HHHH
Confidence 111 13678888654431 1 1222 2344
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeec
Q 011677 222 EALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDL 300 (479)
Q Consensus 222 ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~ 300 (479)
++.+...++|+.+| .|.| . +.+.+.+.++.||+++ |.+ ..| +|+|
T Consensus 205 ~a~~~~~~Gf~~vK----ik~g-------~------~~~~d~e~v~avR~a~---G~d-~~l~vDan------------- 250 (441)
T 2hxt_A 205 LAKEAVADGFRTIK----LKVG-------A------NVQDDIRRCRLARAAI---GPD-IAMAVDAN------------- 250 (441)
T ss_dssp HHHHHHHTTCSEEE----EECC-------S------CHHHHHHHHHHHHHHH---CSS-SEEEEECT-------------
T ss_pred HHHHHHHcCCCEEE----EccC-------C------CHHHHHHHHHHHHHhc---CCC-CeEEEECC-------------
Confidence 55555555665555 3422 1 1334456677777666 644 456 8883
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCC
Q 011677 301 DFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLA 378 (479)
Q Consensus 301 ~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~ 378 (479)
+.||.+++++++. .+++|+|.|||||++++|+++|++|++++ +||++||+ ++++++++++++.+++
T Consensus 251 ----------~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~-~~~~~~~~~~i~~~~~ 318 (441)
T 2hxt_A 251 ----------QRWDVGPAIDWMR-QLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEH-TQNRVVFKQLLQAGAV 318 (441)
T ss_dssp ----------TCCCHHHHHHHHH-TTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTT-CCSHHHHHHHHHHTCC
T ss_pred ----------CCCCHHHHHHHHH-HHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCC-cCCHHHHHHHHHcCCC
Confidence 3578899998764 58999999999999999999999999996 99999997 4679999999999999
Q ss_pred ceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCC
Q 011677 379 MLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRS 420 (479)
Q Consensus 379 d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ 420 (479)
|+| ++|++++||||++++++++|+++|+++ ++|++
T Consensus 319 d~v------~ik~~~~GGite~~~ia~~A~~~g~~~-~~h~~ 353 (441)
T 2hxt_A 319 DLI------QIDAARVGGVNENLAILLLAAKFGVRV-FPHAG 353 (441)
T ss_dssp SEE------CCCTTTSSHHHHHHHHHHHHHHTTCEE-CCCCC
T ss_pred CEE------EeCcceeCCHHHHHHHHHHHHHcCCeE-EEecC
Confidence 999 999999999999999999999999997 57865
No 103
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=1.1e-37 Score=320.99 Aligned_cols=299 Identities=17% Similarity=0.188 Sum_probs=215.8
Q ss_pred CceeeEEEEEEEe----c-----CCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHH
Q 011677 44 PSVITKIKARQIL----D-----SRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAV 110 (479)
Q Consensus 44 ~~~I~~I~~~~i~----d-----s~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av 110 (479)
.|+|++|+++.+- . +.| +.++.|+|+|++|++ ||||+.++. +.|.......+.
T Consensus 9 sMKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~----------G~GE~~~~~----~~~~~~~~~~~~ 74 (376)
T 4h2h_A 9 SLKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTI----------GWGETCPVG----PTYAEAHAGGAL 74 (376)
T ss_dssp CCBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCE----------EEEEECCSS----SSSSSCCHHHHH
T ss_pred CeEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCE----------EEEeecCCC----CCcchhhHHHHH
Confidence 5699999999873 1 222 357999999999994 999987642 345555555554
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 111 KNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 111 ~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
. +.+.+.|.|+|+|+.+.+..+.....+. +. ..|++|||+||||+.||.+|+|||++||| ..+.++|+
T Consensus 75 ~-~~~~l~~~l~g~d~~~~~~~~~~~~~~~-----~~--~~A~said~ALwDl~gK~~g~Pl~~LLGG---~~r~~v~~- 142 (376)
T 4h2h_A 75 A-ALEVLASGLAGAEALPLPLHTRMDSLLC-----GH--NYAKSALDIAVHDLWGKRLGVPVHELLGG---ALTDSVSS- 142 (376)
T ss_dssp H-HHHHHHHTTTTCBSSHHHHHHHHHHHCS-----CC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTC---CSCSEEEC-
T ss_pred H-HHHHHHHHhcCCccCcHHHHHHHHHhhc-----cc--HHHHHHHHHhhhHHHHHhcCCCceecCCC---CcCCceeE-
Confidence 4 4467999999999998765444332222 11 46999999999999999999999999998 44455555
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
|..++.. + .....+++.+...++|+.+| .|.|. .+.+.+.+.++.+|
T Consensus 143 -y~s~~~~-------~---------~~~~~~~a~~~~~~G~~~~K----iKvg~------------~~~~~di~~v~~vr 189 (376)
T 4h2h_A 143 -YYSLGVM-------E---------PDEAARQALEKQREGYSRLQ----VKLGA------------RPIEIDIEAIRKVW 189 (376)
T ss_dssp -EEEECSC-------C---------HHHHHHHHHHHHHHTCSEEE----EECCS------------SCHHHHHHHHHHHH
T ss_pred -eeecccC-------C---------HHHHHHHHHHHHhcCceEEE----EecCC------------CCHHHHHHHHHHHH
Confidence 5443221 1 12234555555556666555 45331 11223445555555
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L 349 (479)
+++. |.+ .++ +|+| +.||.++++++. +.++++++ |||||++ +++++++|
T Consensus 190 ~a~~--g~~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~~-~iEeP~~--~~~~~~~l 239 (376)
T 4h2h_A 190 EAVR--GTG-IALAADGN-----------------------RGWTTRDALRFS-RECPDIPF-VMEQPCN--SFEDLEAI 239 (376)
T ss_dssp HHHT--TSC-CEEEEECT-----------------------TCCCHHHHHHHH-HHCTTSCE-EEESCSS--SHHHHHHH
T ss_pred hhcc--CCe-eEEEEeec-----------------------cCCCHHHHHHHH-HHHhhccc-cccCCcc--hhhhHhhh
Confidence 5552 544 456 8984 367889999875 45788987 9999995 68899999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--h
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--S 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~ 426 (479)
++.+ +||++||+.. ++++++++++.+++|++ |+|++++||+|++++++++|+++|++++++|+. ++.. +
T Consensus 240 ~~~~~~pia~dE~~~-~~~~~~~~~~~~~~d~v------~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~~~-~~~i~~a 311 (376)
T 4h2h_A 240 RPLCHHALYMDEDGT-SLNTVITAAATSLVDGF------GMKVSRIGGLQHMRAFRDFCAARNLPHTCDDAW-GGDIVSA 311 (376)
T ss_dssp GGGCCSCEEESTTCC-SHHHHHHHHHTTCCSEE------CCBHHHHTSHHHHHHHHHHHHHHTCCEECBCSS-CSHHHHH
T ss_pred hhcccCccccCcccC-CHHHHHHHHHhhccCcc------ccccceeCCcHHHHHHHHHHHHcCCCEEeCCCC-ccHHHHH
Confidence 9999 9999999764 59999999999999999 999999999999999999999999998765543 4433 4
Q ss_pred HHHHhHhhcCCCC
Q 011677 427 FIADLSVGLASGQ 439 (479)
Q Consensus 427 ~~~dlAv~~~~~~ 439 (479)
+.+|+|.+....+
T Consensus 312 a~~hlaa~~~~~~ 324 (376)
T 4h2h_A 312 ACTHIASTVLPRL 324 (376)
T ss_dssp HHHHHHTTSCGGG
T ss_pred HHHHHHHhCCccc
Confidence 5667776654433
No 104
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=4.1e-38 Score=329.61 Aligned_cols=305 Identities=11% Similarity=0.074 Sum_probs=212.5
Q ss_pred CceeeEEEEEEEecC-------CC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQILDS-------RG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds-------~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+++.+.-. .| ...+.|+|+|++ + +|+||+. +++ .+..
T Consensus 26 ~mkIt~i~~~~v~~p~~p~~~~~g~~~~~~~~~~V~v~td~-~----------~G~GE~~----------g~~---~~~~ 81 (445)
T 3va8_A 26 RSIIKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITED-S----------YGLGESY----------GDS---AHLD 81 (445)
T ss_dssp HTBCCEEEEEEEEEECCCBEETTEECCSEEEEEEEEEECSS-C----------EEEEEEE----------CCH---HHHH
T ss_pred CCEEEEEEEEEEecCCcccccccCcccCceeEEEEEEEECC-C----------EEEEecC----------CcH---HHHH
Confidence 579999999988422 21 234889999999 8 4999973 222 2333
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhh-ccC-----CCCc------hhhhHHHHHHHHHHHHHHHhcCchhHHHHhcc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLD-KTE-----KKGE------LGANAILAVSIAACKAGAAEKEVPLYKHIADL 179 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~-~~~-----~~~~------~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~ 179 (479)
.| +.++|.|+|+||.+.+++|+.|.+.. +.. +..+ +...|++|||+||||+.||.+|+|||+||||
T Consensus 82 ~i-~~l~p~LiG~d~~~ie~i~~~l~~~~~~~~~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG- 159 (445)
T 3va8_A 82 RL-QKAADKIKGLSVYSTNVIYQRCVESLRNDTNTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLGG- 159 (445)
T ss_dssp HH-HHHHHHHTTSBTTCHHHHHHHHHHHTTTCCC--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC-
T ss_pred HH-HHHHHHHCCCChhHHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC-
Confidence 45 46999999999999999999998742 110 0111 4568999999999999999999999999998
Q ss_pred cCCCCcccccceEEeecCCccCCC-cccccceeeccCCCCcHHHHHHHHHH-HHHHHHHHHHhhhCCCCcccCCCCCCCC
Q 011677 180 AGKTNLTLPVPAFTVISGGKHAGN-NLAIQDIMILPIGASSFGEALQMGSE-TYHHLKAVIAEKYGAHGCNVGEDGGLAP 257 (479)
Q Consensus 180 ~~~~~~~~Pvp~~~~i~GG~~~~~-~l~~~e~~i~p~~~~~~~ea~~~~~e-~~~~lk~~l~~K~G~~~~~vg~~G~~~~ 257 (479)
..+.++|+..+....-..+.+. .... ..+...+...+++.+...+ +|+++| .|.| . .
T Consensus 160 --~~r~~v~~~a~~~y~~~~~~g~~~~~~---~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG----------~--~ 218 (445)
T 3va8_A 160 --RVRDSVQYSAYLFYKWGGHPGDEDDEY---GPALDPEGVVKQAKKIIDEYGFKAIK----LKGG----------V--F 218 (445)
T ss_dssp --CSSSEEEBCEEEECBCSSSTTSCCCTT---CCBCSHHHHHHHHHHHHHHHCCSCEE----EECS----------S--S
T ss_pred --CCCCeEEEeeeeccccccccccccccc---ccCCCHHHHHHHHHHHHHhcCCCEEE----EccC----------C--C
Confidence 4456777754432110000000 0000 0000111223333333332 555544 4433 1 1
Q ss_pred CCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeec
Q 011677 258 NISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIED 336 (479)
Q Consensus 258 ~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEd 336 (479)
+.+++.++++.||+++ .+ ..| +|+| +.||.++++++. +.+++| +.||||
T Consensus 219 ~~~~Di~~v~avRea~----~~-~~L~vDaN-----------------------~~w~~~~Ai~~~-~~L~~~-l~~iEe 268 (445)
T 3va8_A 219 PPADEVAAIKALHKAF----PG-VPLRLDPN-----------------------AAWTVETSKWVA-KELEGI-VEYLED 268 (445)
T ss_dssp CHHHHHHHHHHHHHHS----TT-CCEEEECT-----------------------TCBCHHHHHHHH-HHTTTT-CSEEES
T ss_pred CHHHHHHHHHHHHHhC----CC-CcEeeeCC-----------------------CCCCHHHHHHHH-HHHhhh-cCeEee
Confidence 1233455566666555 22 356 9983 467899999875 457999 999999
Q ss_pred CCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEE
Q 011677 337 PFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVV 415 (479)
Q Consensus 337 P~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~ 415 (479)
|++ |++++++|++++ +||++||+. +++++++++++.+++|++ ++|++++||||++++++++|+++|+++
T Consensus 269 P~~--d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~div------~~d~~~~GGitea~kia~lA~~~gv~v- 338 (445)
T 3va8_A 269 PAG--EIEGMAAVAKEASMPLATNMAV-VAFDHLPPSILQDAVQVI------LSDHHFWGGLRKSQTLASICATWGLRL- 338 (445)
T ss_dssp CBS--HHHHHHHHHTTCSSCEEESSSC-CSGGGHHHHHHTTCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEE-
T ss_pred cCc--CHHHHHHHHHcCCCCEEeCCcc-CCHHHHHHHHHcCCCCEE------EecchhcCCHHHHHHHHHHHHHcCCEE-
Confidence 984 899999999999 999999975 569999999999999999 999999999999999999999999996
Q ss_pred EecCCCCCchh--HHHHhHhhc
Q 011677 416 ISHRSGETEDS--FIADLSVGL 435 (479)
Q Consensus 416 v~h~~get~d~--~~~dlAv~~ 435 (479)
+.|...|+..+ +.+|||.++
T Consensus 339 ~~h~~~e~~I~~aa~~hlaaa~ 360 (445)
T 3va8_A 339 SMHSNSHLGISLAAMTHLASAT 360 (445)
T ss_dssp EECCCSCCHHHHHHHHHHHHTC
T ss_pred EEeCCcccHHHHHHHHHHHHhC
Confidence 55777776654 445776554
No 105
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=2.3e-38 Score=327.80 Aligned_cols=294 Identities=15% Similarity=0.094 Sum_probs=209.8
Q ss_pred CceeeEEEEEEEe--------cC--CC-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHH
Q 011677 44 PSVITKIKARQIL--------DS--RG-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNR 108 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------ds--~g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~ 108 (479)
+|+|++|+.+.+. .+ ++ ++++.|+|+|+ |++ |+||+. |
T Consensus 11 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~----------G~GE~~-----------g----- 63 (392)
T 3p3b_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQT----------GYGSSI-----------H----- 63 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEE----------EEEECC-----------S-----
T ss_pred CCeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCE----------EEEecc-----------c-----
Confidence 5799999998772 12 22 56799999999 984 999963 1
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccC-CC-Ccc
Q 011677 109 AVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAG-KT-NLT 186 (479)
Q Consensus 109 av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~-~~-~~~ 186 (479)
.|+ .++|.|+|+|+.+++++| +++..+|++|||+||||+.||..|+|||++|||... .. +.+
T Consensus 64 ---~i~-~l~p~l~G~d~~~~~~~~------------~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~~~~~~ 127 (392)
T 3p3b_A 64 ---MTP-EWAEDVIGRRLLDLFDDR------------GRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAHLETGASLV 127 (392)
T ss_dssp ---CCH-HHHHTTTTCBGGGGBCTT------------SCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC--------CEE
T ss_pred ---HHH-HHHHHhcCCCHHHHHHHH------------hHHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCccccccccCC
Confidence 355 689999999999887765 123468999999999999999999999999997211 11 234
Q ss_pred cccceEE--eecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHH
Q 011677 187 LPVPAFT--VISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIRE 264 (479)
Q Consensus 187 ~Pvp~~~--~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~ 264 (479)
+|+ |+ ...|+.+..+.++++|. ..+++.+...++|+.+| .| +|..++|.++..+.+.
T Consensus 128 vp~--~~s~~~~~~~~~~~~~~~~e~--------~~~~a~~~~~~Gf~~vK----ik-------~g~~~~~~~~~~~~~~ 186 (392)
T 3p3b_A 128 VPC--YDTSLYFDDLHLADERAAVAL--------MQEEAMQGYAKGQRHFK----IK-------VGRGGRHMPLWEGTKR 186 (392)
T ss_dssp EEE--EEEEECBTTTTCCSHHHHHHH--------HHHHHHHHHHTTCCCEE----EE-------CCHHHHTSCHHHHHHH
T ss_pred cce--eEeecccCCCCcccccchHHH--------HHHHHHHHHHhCCCEEE----EC-------cCcCcccCCccccHHH
Confidence 444 54 22221111111111121 23344444445555554 23 2322233322122344
Q ss_pred HHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCH
Q 011677 265 GLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDW 343 (479)
Q Consensus 265 ~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~ 343 (479)
.++.|+++.+.+|.+ ..| +|++ +.||.+++++++.. +++|+|.|||||++ +|+
T Consensus 187 ~~e~v~avR~~~g~d-~~l~vDan-----------------------~~~~~~~ai~~~~~-l~~~~i~~iE~P~~-~d~ 240 (392)
T 3p3b_A 187 DIAIVRGISEVAGPA-GKIMIDAN-----------------------NAYNLNLTKEVLAA-LSDVNLYWLEEAFH-EDE 240 (392)
T ss_dssp HHHHHHHHHHHHCTT-CCEEEECT-----------------------TCCCHHHHHHHHHH-TTTSCEEEEECSSS-CCH
T ss_pred HHHHHHHHHHHhCCC-CeEEEECC-----------------------CCCCHHHHHHHHHH-HHhcCCCEEecCCc-ccH
Confidence 455554444445755 456 8883 35788999988654 89999999999999 999
Q ss_pred HHHHHHHhh-----h-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEe
Q 011677 344 EHTKSVLQI-----C-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 344 ~g~~~L~~~-----~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~ 417 (479)
++|++|+++ + +||++|| . +++++++++++.+++|++ ++|++++ |+|++++++++|+++|+++|+
T Consensus 241 ~~~~~l~~~l~~~g~~iPIa~dE-~-~~~~~~~~~i~~~~~d~v------~ik~~~~-Git~~~~i~~~A~~~gi~~~~- 310 (392)
T 3p3b_A 241 ALYEDLKEWLGQRGQNVLIADGE-G-LASPHLIEWATRGRVDVL------QYDIIWP-GFTHWMELGEKLDAHGLRSAP- 310 (392)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECC-S-SCCTTHHHHHHTTSCCEE------CCBTTTB-CHHHHHHHHHHHHHTTCEECC-
T ss_pred HHHHHHHHhhccCCCCccEEecC-C-CCHHHHHHHHHcCCCCEE------EeCcccc-CHHHHHHHHHHHHHcCCEEEe-
Confidence 999999999 8 9999999 5 569999999999999999 9999999 999999999999999999866
Q ss_pred cCCCCCchhHHHHhHhhcCCC
Q 011677 418 HRSGETEDSFIADLSVGLASG 438 (479)
Q Consensus 418 h~~get~d~~~~dlAv~~~~~ 438 (479)
| +.||..+++++++++...+
T Consensus 311 h-~~es~i~~~a~l~laa~~~ 330 (392)
T 3p3b_A 311 H-CYGNAYGIYASGHLSAAVR 330 (392)
T ss_dssp B-CCSCTHHHHHHHHHGGGCT
T ss_pred c-CCCCHHHHHHHHHHHHhCC
Confidence 7 7899988887777775444
No 106
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=1.2e-37 Score=326.90 Aligned_cols=310 Identities=13% Similarity=0.096 Sum_probs=213.8
Q ss_pred CceeeEEEEEEEecCCC------------CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQILDSRG------------IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g------------~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
.|+|++|+++.|.-+.. ...+.|+|+|++|++ |+||+.. ++. +..
T Consensus 4 ~~~It~v~~~~v~~~d~~~~~~~g~~~~~~~~~iV~v~td~Gi~----------G~GE~~~----------~~~---v~~ 60 (450)
T 3mzn_A 4 FPKITKMNVVPVAGEDGFLLNLSGGHEPWFIRCVLVLEDESGNR----------GVGEIPS----------SEG---ILN 60 (450)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCE----------EEEEEEC----------CHH---HHH
T ss_pred CCEEEEEEEEEecccCccccccccCCCCcceEEEEEEEECCCCE----------EEEeCCC----------cHH---HHH
Confidence 46999999999953211 124689999999994 9999732 222 334
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhh-cc--CCCC------chhhhHHHHHHHHHHHHHHHhcCchhHHHHh--ccc
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLD-KT--EKKG------ELGANAILAVSIAACKAGAAEKEVPLYKHIA--DLA 180 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~-~~--~~~~------~~g~~A~~AvsiAl~da~ak~~g~PLy~lLg--g~~ 180 (479)
.|+ .++|.|+|+||.+.+++|+.|++.. +. ...+ .+..+|++|||+||||+.||.+|+|||+||| |
T Consensus 61 ~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~g~~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG~~G-- 137 (450)
T 3mzn_A 61 GLE-KCRSLVEGARVNEVKQVLSRARGLLAQGGPEERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLGQYG-- 137 (450)
T ss_dssp HHH-HTHHHHTTCBGGGHHHHHHHHHHHHGGGCCCCCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGSTTTC--
T ss_pred HHH-HHHHHhCCCChhhHHHHHHHHHHHhhcccCCCcccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCC--
Confidence 454 4899999999999999999998642 11 1111 1446899999999999999999999999999 5
Q ss_pred CCCCcccccceEEeecCCccCCCcccccce------ee-c-cCCCCcHHHH----HHHHH-HHHHHHHHHHHhhhCCCCc
Q 011677 181 GKTNLTLPVPAFTVISGGKHAGNNLAIQDI------MI-L-PIGASSFGEA----LQMGS-ETYHHLKAVIAEKYGAHGC 247 (479)
Q Consensus 181 ~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~------~i-~-p~~~~~~~ea----~~~~~-e~~~~lk~~l~~K~G~~~~ 247 (479)
..+.++|++.+....|... ...+.+... .. + -.+..+.++. .+... ++|+++| .|.|
T Consensus 138 -~~r~~v~~y~~~~~~gd~~-~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG---- 207 (450)
T 3mzn_A 138 -RQRDEVEALGYLFLLGDPD-KTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDFK----LKGG---- 207 (450)
T ss_dssp -CCCSEEEBCEEEECBCCGG-GSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEE----EECS----
T ss_pred -CcCceEEeeeeeccccccc-cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----ECCC----
Confidence 3456777754432222100 000000000 00 0 0001223333 33222 2454444 4433
Q ss_pred ccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHH
Q 011677 248 NVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELC 326 (479)
Q Consensus 248 ~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll 326 (479)
. .+.+++.++++.||+++ .+ .+| +|+| +.||.++++++. +.+
T Consensus 208 ------~--~~~~~Di~~v~avRea~----pd-~~L~vDaN-----------------------~~w~~~~A~~~~-~~L 250 (450)
T 3mzn_A 208 ------V--LRGEEEADCIRALHEAF----PE-ARLALDPN-----------------------GAWKLDEAVRVL-EPI 250 (450)
T ss_dssp ------S--SCHHHHHHHHHHHHHHC----TT-SEEEEECT-----------------------TCBCHHHHHHHH-GGG
T ss_pred ------C--CCHHHHHHHHHHHHHhC----CC-CeEEEECC-----------------------CCCCHHHHHHHH-HHh
Confidence 1 11223445555555443 22 356 9984 367899999875 567
Q ss_pred hhCCceeeecCCCccC----HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHH
Q 011677 327 ADYPIVSIEDPFDKED----WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAI 401 (479)
Q Consensus 327 ~~~~i~~iEdP~~~~D----~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~ 401 (479)
++| +.|||||++++| ++++++|++++ +||++||+ .++.++++++++.+++|++ ++|+ ++||||+++
T Consensus 251 ~~~-i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~di~------~~d~-~~GGit~a~ 321 (450)
T 3mzn_A 251 KHL-LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMI-ATDYKQLQYAVQLNSVDIP------LADC-HFWTMQGAV 321 (450)
T ss_dssp GGG-CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSS-SSSHHHHHHHHHHTCCSEE------BCCH-HHHCHHHHH
T ss_pred hhc-cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCc-cCCHHHHHHHHHcCCCCEE------EecC-ccCCHHHHH
Confidence 999 999999999999 79999999999 99999996 4679999999999999999 9999 799999999
Q ss_pred HHHHHHhhCCCeEEEecCCCCCch--hHHHHhHhhcC
Q 011677 402 EVVKLANDVPWGVVISHRSGETED--SFIADLSVGLA 436 (479)
Q Consensus 402 ~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv~~~ 436 (479)
+++++|+++|+++ .+|...++.. ++.+||+.++.
T Consensus 322 kia~lA~a~gv~~-~~h~~~~~~I~~aA~~hlaaa~p 357 (450)
T 3mzn_A 322 AVGELCNEWGMTW-GSHSNNHFDISLAMMTHVAAACP 357 (450)
T ss_dssp HHHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999999999995 6787777644 45667777764
No 107
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.5e-38 Score=330.24 Aligned_cols=301 Identities=11% Similarity=0.085 Sum_probs=216.0
Q ss_pred ceeeEEEEEEEecCCC-------CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHH--HHHHHHHH
Q 011677 45 SVITKIKARQILDSRG-------IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVN--RAVKNINE 115 (479)
Q Consensus 45 ~~I~~I~~~~i~ds~g-------~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~--~av~~i~~ 115 (479)
|+|++|+.+.+.-... +++++|+|+|+ |++ |+||+.+.+ |.++++. .+...|++
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~V~v~td-G~~----------G~GE~~~~~------~~~~~~~~~~~~~~i~~ 65 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGSQDALLVRVAAG-GHI----------GWGECEAAP------LPSIAAFVCPKSHGVCR 65 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGGGEEEEEEEEET-TEE----------EEEEECSCH------HHHHHHHHCCCSBTTBC
T ss_pred CEEEEEEEEEEeccCCCccccccceEEEEEEEeC-CcE----------EEEeeeccc------CCcccchhHHHHHHHHH
Confidence 7999999998853321 45899999999 984 999986531 2233321 23445666
Q ss_pred HHHHhhcCCCCCCHH-HHHHHHHhhhccCCCCchhhh--HHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 116 RISEALVGMDPILQS-QIDQAMIDLDKTEKKGELGAN--AILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 116 ~l~p~LiG~d~~~~~-~id~~l~~~~~~~~~~~~g~~--A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
.++|.|+|+ +.+++ .+++.+......+ +.+..+ |++|||+||||+.||.+|+|||++||| ..+.++|+ |
T Consensus 66 ~l~~~l~G~-~~~~~~~l~~~~~~~~~~g--~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~~~~vp~--~ 137 (401)
T 2hzg_A 66 PVSDSVLGQ-RLDGPDDIARIAALVGYNS--MDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLGY---SASHGKRP--Y 137 (401)
T ss_dssp CGGGGTTTC-BCSSHHHHHHHHHHHHHHT--TTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTTC---SCCCCBEE--E
T ss_pred HHHHHhCCC-CCCHHHHHHHHHHhhccCC--ccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCC---CCCCceEe--e
Confidence 789999999 98885 2322221110000 012357 999999999999999999999999998 33345555 5
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCC-CchHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNI-SSIREGLDLVKE 271 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~-~~~~~~l~~v~~ 271 (479)
+++.++ + ++++ ..+++.+...++|+.+| .|. ..+| + ++ +.+.+.++.||+
T Consensus 138 ~~~~~~----~--~~~~---------~~~~a~~~~~~Gf~~iK----ik~----spvG---~---~~~~~~~e~v~avr~ 188 (401)
T 2hzg_A 138 ASLLFG----D--TPQE---------TLERARAARRDGFAAVK----FGW----GPIG---R---GTVAADADQIMAARE 188 (401)
T ss_dssp EEEECC----S--SHHH---------HHHHHHHHHHTTCSEEE----EES----TTTT---S---SCHHHHHHHHHHHHH
T ss_pred EEcCCC----C--CHHH---------HHHHHHHHHHhCCCeEE----EcC----CCCC---C---CHHHHHHHHHHHHHH
Confidence 444322 0 2222 23455555555565555 230 0122 1 23 344666777776
Q ss_pred HHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCC--CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHH
Q 011677 272 AINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFK--SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKS 348 (479)
Q Consensus 272 ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~--t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~ 348 (479)
++ |.+ ..+ +|++ +.| |.++++++++ .+++|++.|||||++++|+++|++
T Consensus 189 a~---G~d-~~l~vDan-----------------------~~~~~~~~~a~~~~~-~l~~~~i~~iEqP~~~~d~~~~~~ 240 (401)
T 2hzg_A 189 GL---GPD-GDLMVDVG-----------------------QIFGEDVEAAAARLP-TLDAAGVLWLEEPFDAGALAAHAA 240 (401)
T ss_dssp HH---CSS-SEEEEECT-----------------------TTTTTCHHHHHTTHH-HHHHTTCSEEECCSCTTCHHHHHH
T ss_pred Hh---CCC-CeEEEECC-----------------------CCCCCCHHHHHHHHH-HHHhcCCCEEECCCCccCHHHHHH
Confidence 66 644 455 8883 357 8899998865 489999999999999999999999
Q ss_pred HHh-hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh
Q 011677 349 VLQ-IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS 426 (479)
Q Consensus 349 L~~-~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~ 426 (479)
|++ ++ +||++||+..+ +++++++++.+++|++ ++|++++||+|++++++++|+++|++++ +| +.||..+
T Consensus 241 l~~~~~~iPI~~dE~~~~-~~~~~~~i~~~~~d~v------~ik~~~~GGit~~~~i~~~A~~~g~~~~-~h-~~es~i~ 311 (401)
T 2hzg_A 241 LAGRGARVRIAGGEAAHN-FHMAQHLMDYGRIGFI------QIDCGRIGGLGPAKRVADAAQARGITYV-NH-TFTSHLA 311 (401)
T ss_dssp HHTTCCSSEEEECTTCSS-HHHHHHHHHHSCCSEE------EECHHHHTSHHHHHHHHHHHHHHTCEEE-EC-CCSCHHH
T ss_pred HHhhCCCCCEEecCCcCC-HHHHHHHHHCCCCCEE------EeCcchhCCHHHHHHHHHHHHHcCCEEe-cC-CCCcHHH
Confidence 999 89 99999998754 9999999999999999 9999999999999999999999999975 67 7898887
Q ss_pred HH--HHhHhhcC
Q 011677 427 FI--ADLSVGLA 436 (479)
Q Consensus 427 ~~--~dlAv~~~ 436 (479)
.. +|||.++.
T Consensus 312 ~~a~~hlaaa~~ 323 (401)
T 2hzg_A 312 LSASLQPFAGLE 323 (401)
T ss_dssp HHHHHGGGTTCT
T ss_pred HHHHHHHHHhCC
Confidence 65 56655554
No 108
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=7.5e-38 Score=329.74 Aligned_cols=310 Identities=14% Similarity=0.082 Sum_probs=213.4
Q ss_pred CceeeEEEEEEEecCCC---------C---ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHH
Q 011677 44 PSVITKIKARQILDSRG---------I---PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVK 111 (479)
Q Consensus 44 ~~~I~~I~~~~i~ds~g---------~---~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~ 111 (479)
+|+|++|+++.+.-+.. . ..+.|+|+|++|++ |+||+. +++. +..
T Consensus 7 ~~~It~i~~~~v~~~d~~~~~~~g~h~p~~~~~~V~i~td~Gi~----------G~GE~~----------~~~~---v~~ 63 (470)
T 3p0w_A 7 TPRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRT----------GVGEVP----------GGEG---IRQ 63 (470)
T ss_dssp CCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCE----------EEEEEE----------CCHH---HHH
T ss_pred CCeEEEEEEEEecCCCcccccccccCCCcceEEEEEEEECCCCE----------EEEeCC----------ChHH---HHH
Confidence 67999999999953311 1 25799999999994 999963 1222 334
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCc--------------h-----------hhhHHHHHHHHHHHHHHH
Q 011677 112 NINERISEALVGMDPILQSQIDQAMIDLDKTEKKGE--------------L-----------GANAILAVSIAACKAGAA 166 (479)
Q Consensus 112 ~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~--------------~-----------g~~A~~AvsiAl~da~ak 166 (479)
.|++ ++|.|+|+||.+.+.+|+.|++......+++ . ...|++|||+||||+.||
T Consensus 64 ~i~~-l~p~LiG~d~~~ie~i~~~~~~~~~~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWDl~gK 142 (470)
T 3p0w_A 64 ALER-VIPLVVGQSIGRTNGVLSSIRRALAGGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLDLLGQ 142 (470)
T ss_dssp HHHH-TGGGTTTCBGGGHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhCCCChhhHHHHHHHHHHHHhhcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 4554 8999999999999999999987421110111 0 137999999999999999
Q ss_pred hcCchhHHHHh-cccCCCCcccccceEEeecCCccCCCcccccce------ee-c-cCCCCcHH----HHHHHHH-HHHH
Q 011677 167 EKEVPLYKHIA-DLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDI------MI-L-PIGASSFG----EALQMGS-ETYH 232 (479)
Q Consensus 167 ~~g~PLy~lLg-g~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~------~i-~-p~~~~~~~----ea~~~~~-e~~~ 232 (479)
.+|+|||+||| | ..+.++|++.+....|.. ....+.+... .. + ..+..+.+ ++.+... ++|+
T Consensus 143 ~~g~Pv~~LLGgG---~~r~~v~~y~~~~~~gd~-~~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~ 218 (470)
T 3p0w_A 143 FLEVPVAELLGAG---QQRDSAPMLAYLFYVGDR-RKTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAATERYGFA 218 (470)
T ss_dssp HHTSBGGGTSTTS---CCCSEEEBCEEECCBCCG-GGSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCS
T ss_pred HcCCcHHHHhCCC---CCCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999 5 445677765443211110 0000000000 00 0 00012233 3333333 3554
Q ss_pred HHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCC
Q 011677 233 HLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQN 311 (479)
Q Consensus 233 ~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~ 311 (479)
++| .|.|. .+.+++.++++.||+++ .+ .+| +|+| +
T Consensus 219 ~~K----lKvG~------------~~~~~Di~rv~avRea~----pd-~~L~vDaN-----------------------~ 254 (470)
T 3p0w_A 219 DFK----LKGGV------------MPGAEEMEAIAAIKARF----PH-ARVTLDPN-----------------------G 254 (470)
T ss_dssp EEE----EECSS------------SCHHHHHHHHHHHHHHC----TT-SEEEEECT-----------------------T
T ss_pred EEE----EeCCC------------CCHHHHHHHHHHHHHhC----CC-CeEEeeCC-----------------------C
Confidence 444 45331 11223445555555543 22 356 9984 3
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCCccC----HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCC
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFDKED----WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYP 386 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D----~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~ 386 (479)
.||.++++++. +.+++| +.|||||++++| ++++++|++++ +||++||+ +++.++++++++.+++|++
T Consensus 255 ~w~~~~Ai~~~-~~Le~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~a~div----- 326 (470)
T 3p0w_A 255 AWSLNEAIALC-KGQGHL-VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMI-ATDWRQMGHAVQLHAVDIP----- 326 (470)
T ss_dssp BBCHHHHHHHH-TTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSS-SCSHHHHHHHHHTTCCSEE-----
T ss_pred CCCHHHHHHHH-Hhcccc-ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCc-cCCHHHHHHHHHcCCCCEE-----
Confidence 67889999875 557899 999999999999 79999999999 99999996 4669999999999999999
Q ss_pred CCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHhhcC
Q 011677 387 SNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADLSVGLA 436 (479)
Q Consensus 387 ~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv~~~ 436 (479)
++|+ ++||||++++++++|+++|+++ ++|+..|+.. ++.+||+.++.
T Consensus 327 -~~d~-~~GGit~a~kia~lA~a~gv~~-~~h~~~e~~I~~aA~~hlaaa~p 375 (470)
T 3p0w_A 327 -LADP-HFWTMQGSVRVAQLCDEWGLTW-GSHSNNHFDVSLAMFTHVAAAAP 375 (470)
T ss_dssp -BCCH-HHHCHHHHHHHHHHHHHHTCCC-BCCCCSCCHHHHHHHHHHHHTCC
T ss_pred -EecC-ccCCHHHHHHHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999 7999999999999999999996 6787777644 45677777764
No 109
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=2.6e-37 Score=324.81 Aligned_cols=314 Identities=18% Similarity=0.123 Sum_probs=212.3
Q ss_pred hhcCCceeeEEEEEEEecCC-------C-----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHH
Q 011677 40 RKAVPSVITKIKARQILDSR-------G-----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVN 107 (479)
Q Consensus 40 ~~~~~~~I~~I~~~~i~ds~-------g-----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~ 107 (479)
|+.++|+|++|+++.|.-+. | ...+.|+|+|++|++ |+||+.. ++.+
T Consensus 4 ~~~~~~~It~v~v~~v~~~d~~~~~~~g~h~~~~~~~iV~v~td~Gi~----------G~GE~~~----------~~~v- 62 (455)
T 3pfr_A 4 STQSVPVITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHT----------GVGEAPG----------GATI- 62 (455)
T ss_dssp ---CCCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCE----------EEEEEEC----------SHHH-
T ss_pred ccCCCCEEEEEEEEEeccCCccccccccCCCCcceEEEEEEEECCCCE----------EEEeCCC----------cHHH-
Confidence 44457799999999995321 1 124689999999994 9999732 2223
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHh--hhc-c--CCCCc----hhhhHHHHHHHHHHHHHHHhcCchhHHHHh-
Q 011677 108 RAVKNINERISEALVGMDPILQSQIDQAMID--LDK-T--EKKGE----LGANAILAVSIAACKAGAAEKEVPLYKHIA- 177 (479)
Q Consensus 108 ~av~~i~~~l~p~LiG~d~~~~~~id~~l~~--~~~-~--~~~~~----~g~~A~~AvsiAl~da~ak~~g~PLy~lLg- 177 (479)
...|+ .++|.|+|+||.+.+++|+.|++ .-. . +.++. +..+|++|||+||||+.||.+|+|||+|||
T Consensus 63 --~~~i~-~l~p~LiG~dp~~ie~i~~~~~~~~~~~~~~~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGg 139 (455)
T 3pfr_A 63 --ENALT-EAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGP 139 (455)
T ss_dssp --HHHHH-HHGGGTTTCBGGGHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGSTT
T ss_pred --HHHHH-HHHHHhcCCChhHHHHHHHHHHhhccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCC
Confidence 33454 58999999999999999999986 211 0 11111 126899999999999999999999999999
Q ss_pred cccCCCCcccccceEEeecCCccCCCccccc-c------eee-ccCCCCcHHHHHH----HHH-HHHHHHHHHHHhhhCC
Q 011677 178 DLAGKTNLTLPVPAFTVISGGKHAGNNLAIQ-D------IMI-LPIGASSFGEALQ----MGS-ETYHHLKAVIAEKYGA 244 (479)
Q Consensus 178 g~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~-e------~~i-~p~~~~~~~ea~~----~~~-e~~~~lk~~l~~K~G~ 244 (479)
| ..+.++|++.+....|.. ....+.+. . ..- ......+.++..+ ... ++|+++| .|.|.
T Consensus 140 G---~~r~~v~~y~~~~~~gd~-~~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~K----lKvG~ 211 (455)
T 3pfr_A 140 G---KQRDEVTVLGYLFYVGDD-KITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFK----LKGGV 211 (455)
T ss_dssp S---CCCSEEEBCEEECCBCCG-GGSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEE----EECSS
T ss_pred C---CcCCeEEEeeeecccccc-ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEE----EcCCC
Confidence 5 445677765443222210 00000000 0 000 0000123333332 222 2444443 34331
Q ss_pred CCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHH
Q 011677 245 HGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYK 323 (479)
Q Consensus 245 ~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~ 323 (479)
.+.+++.++++.||+++ .+ .+| +|+| +.||.++++++.
T Consensus 212 ------------~~~~~Di~~v~avRea~----pd-~~L~vDaN-----------------------~~w~~~~A~~~~- 250 (455)
T 3pfr_A 212 ------------FEGSKEIDTVIELKKHF----PD-ARITLDPN-----------------------GCWSLDEAIQLC- 250 (455)
T ss_dssp ------------SCHHHHHHHHHHHHHHC----TT-CCEEEECT-----------------------TBSCHHHHHHHH-
T ss_pred ------------CCHHHHHHHHHHHHHhC----CC-CeEeecCC-----------------------CCCCHHHHHHHH-
Confidence 11223445555555543 22 356 9984 367899999875
Q ss_pred HHHhhCCceeeecCCCccC----HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHH
Q 011677 324 ELCADYPIVSIEDPFDKED----WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVT 398 (479)
Q Consensus 324 ~ll~~~~i~~iEdP~~~~D----~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggit 398 (479)
+.+++| +.|||||++++| ++++++|++++ +||++||+ .++.++++++++.+++|++ ++|+ ++||||
T Consensus 251 ~~L~~~-l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~i~~~a~di~------~~d~-~~GGit 321 (455)
T 3pfr_A 251 KGLNDV-LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMI-ATNWREMCHAIMLQSVDIP------LADP-HFWTLT 321 (455)
T ss_dssp TTCTTT-CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSS-CCSHHHHHHHHHHTCCSEE------BCCH-HHHCHH
T ss_pred Hhhccc-ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCC-cCCHHHHHHHHHcCCCCEE------EecC-CcCCHH
Confidence 557899 999999999999 79999999999 99999996 4669999999999999999 9998 799999
Q ss_pred HHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHhhcC
Q 011677 399 EAIEVVKLANDVPWGVVISHRSGETED--SFIADLSVGLA 436 (479)
Q Consensus 399 ea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv~~~ 436 (479)
++++++++|+++|+++ .+|...++.. ++.+||+.++.
T Consensus 322 ~a~kia~lA~a~gv~~-~~h~~~~~~i~~aa~~hlaaa~p 360 (455)
T 3pfr_A 322 GASRVAQLCNEWGLTW-GCHSNNHFDISLAMFSHVGAAAP 360 (455)
T ss_dssp HHHHHHHHHHHTTCCC-BCCCCSCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCCEE-EecCCcccHHHHHHHHHHHHhCC
Confidence 9999999999999995 6787777644 45678877764
No 110
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=7.4e-37 Score=322.41 Aligned_cols=326 Identities=13% Similarity=0.106 Sum_probs=212.1
Q ss_pred HHHHHHhhhcCCceeeEEEEEEEe--cC-----CC--Cce---EEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCc
Q 011677 33 LFISNHMRKAVPSVITKIKARQIL--DS-----RG--IPT---VEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGT 100 (479)
Q Consensus 33 ~~l~~~~~~~~~~~I~~I~~~~i~--ds-----~g--~~~---v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~ 100 (479)
|+=--||.+.++|+|+++++..|- || .| .|. .+|+|+|++|++ |+||+.
T Consensus 14 ~~~~~~~~~~~~p~i~~~~v~pva~~d~~l~~~~g~h~p~f~RtiV~v~Td~Gi~----------G~GE~~--------- 74 (464)
T 4g8t_A 14 GTENLYFQSMSTPIITEMQVIPVAGHDSMLLNLSGAHSPYFTRNIVILKDNSGNT----------GVGEVP--------- 74 (464)
T ss_dssp ----------CCCBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCE----------EEEEEE---------
T ss_pred CccceeeeccCCCEEeEEEEEEecCCCcccccCCcccCCccceEEEEEEECCCCE----------EEEeCC---------
Confidence 333457888777899999999993 33 22 232 469999999994 999963
Q ss_pred cccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCC---------CchhhhHHHHHHHHHHHHHHHhcCch
Q 011677 101 YLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKK---------GELGANAILAVSIAACKAGAAEKEVP 171 (479)
Q Consensus 101 y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~---------~~~g~~A~~AvsiAl~da~ak~~g~P 171 (479)
+++.+. +.|+ .++|.|+|+||.+.+.||+.|.+....... .....+|++|||+||||+.||.+|+|
T Consensus 75 -g~~~~~---~~le-~~~p~liG~dp~~ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~P 149 (464)
T 4g8t_A 75 -GGEKIR---QTLE-DAKPLVIGKTLGEYKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVT 149 (464)
T ss_dssp -CCHHHH---HHHH-HHGGGTTTCBGGGHHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSB
T ss_pred -CcHHHH---HHHH-HHHHHHcCCCHHHHHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCc
Confidence 333333 3343 589999999999999999999863211111 12346799999999999999999999
Q ss_pred hHHHHhcccCCCCcccccceEEeecCCccCCCccccc-------ceeecc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhC
Q 011677 172 LYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQ-------DIMILP-IGASSFGEALQMGSETYHHLKAVIAEKYG 243 (479)
Q Consensus 172 Ly~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~-------e~~i~p-~~~~~~~ea~~~~~e~~~~lk~~l~~K~G 243 (479)
||+|||+ |..+.++|++.+....|.... ..+... ..+... ....+..+.++...+.+. +.|
T Consensus 150 v~~LLGg--G~~Rd~V~~y~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~G 218 (464)
T 4g8t_A 150 VASLLGD--GQQRDAVEMLGYLFFIGDRKK-TTLAYQNQENDPCDWYRVRHEEAMTPESVVRLAEAAYE--------KYG 218 (464)
T ss_dssp TGGGSTT--SCCCSEEEBCEEECCBCCGGG-SCSCCCCCTTCSSHHHHHTTSCBCSHHHHHHHHHHHHH--------HHC
T ss_pred HHHHhCC--CCCCceEEEEEEeeccCcccc-cchhhhcccccccchhhhcccccCCHHHHHHHHHHHHH--------HcC
Confidence 9999994 155677777665543321100 000000 000000 001123333333322221 223
Q ss_pred CCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHH
Q 011677 244 AHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMY 322 (479)
Q Consensus 244 ~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~ 322 (479)
....++.- |. .+.+++.++++.||+++ | + .+| +|+| +.||.++++++.
T Consensus 219 f~~~KlKv-G~--~~~~~di~~v~avrea~---p-d-~~L~vDaN-----------------------~~wt~~~Ai~~~ 267 (464)
T 4g8t_A 219 FNDFKLKG-GV--LDGFEEAEAVTALAKRF---P-D-ARITLDPN-----------------------GAWSLDEAVKIG 267 (464)
T ss_dssp CSCEEEEC-SS--SCHHHHHHHHHHHHHHS---T-T-CCEEEECT-----------------------TCBCHHHHHHHH
T ss_pred CCeEEEeC-CC--CCHHHHHHHHHHHHhhC---C-C-ceEEEECC-----------------------CccCHHHHHHHH
Confidence 32222210 11 11223344555555544 4 2 356 9984 367899999865
Q ss_pred HHHHhhCCceeeecCCCccCH----HHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccH
Q 011677 323 KELCADYPIVSIEDPFDKEDW----EHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTV 397 (479)
Q Consensus 323 ~~ll~~~~i~~iEdP~~~~D~----~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggi 397 (479)
+.++++ +.|||||++++|+ +.+++|++++ +||++||... ++++++++++.+++|++ +++ .++|||
T Consensus 268 -~~le~~-l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~-~~~~~~~~i~~~avdi~------~~d-~~~GGi 337 (464)
T 4g8t_A 268 -KQLKGV-LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIAT-DWRQMGHTISLQSVDIP------LAD-PHFWTM 337 (464)
T ss_dssp -HHTTTT-CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSC-SHHHHHHHHHHTCCSEE------BCC-HHHHCH
T ss_pred -HHhhhc-cceeecCcCcccccchHHHHHhhhccCCCCcccccccc-chhhHHHHHHhhCCCEE------ecc-ccccch
Confidence 557888 9999999999985 7788999999 9999999764 59999999999999999 999 589999
Q ss_pred HHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHhhc
Q 011677 398 TEAIEVVKLANDVPWGVVISHRSGETED--SFIADLSVGL 435 (479)
Q Consensus 398 tea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv~~ 435 (479)
|++++++++|+++|+++ +.|...++.. ++.+|+|.++
T Consensus 338 t~~~kia~lA~~~gi~v-~~h~~~~~~I~laA~~hlaaa~ 376 (464)
T 4g8t_A 338 QGSIRVAQMCHEWGLTW-GSHSNNHFDISLAMFTHVAAAA 376 (464)
T ss_dssp HHHHHHHHHHHHHTCCC-BCCCCSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCEE-EEcCCcccHHHHHHHHHHHHhC
Confidence 99999999999999997 5575556544 4556777665
No 111
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=4.2e-37 Score=312.24 Aligned_cols=270 Identities=22% Similarity=0.218 Sum_probs=198.6
Q ss_pred CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCC-CCCCHHHHHHHHHhh
Q 011677 61 IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGM-DPILQSQIDQAMIDL 139 (479)
Q Consensus 61 ~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~-d~~~~~~id~~l~~~ 139 (479)
++.+.|+| |++|++ |+||+.++ .|.+++...+...+++. . |+|+ ||.+.+++|+.|.+.
T Consensus 26 ~~~~~V~v-td~G~~----------G~GE~~~~------~~~ge~~~~~~~~l~~~-~--l~g~~d~~~~e~~~~~l~~~ 85 (338)
T 3ijl_A 26 TPDVQVEI-EYEGVT----------GYGEASMP------PYLGETVESVMNFLKKV-N--LEQFSDPFQLEDILSYVDSL 85 (338)
T ss_dssp ECEEEEEE-EETTEE----------EEEEEECC------GGGSCCHHHHHHHHTTC-C--CTTCCCTTCHHHHHHHHHHT
T ss_pred eeEEEEEE-EeCCcE----------EEEeeeCC------CCCCCCHHHHHHHHHHH-H--hcCCCCccCHHHHHHHHHHh
Confidence 45799999 899994 99998874 24556666665554432 2 8899 999999999999863
Q ss_pred hccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCc
Q 011677 140 DKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASS 219 (479)
Q Consensus 140 ~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~ 219 (479)
.+ ...+|++|||+||||+.||..|+|||++||| . +.++|+..+++ |. .+
T Consensus 86 ~~------~~~~A~said~ALwDl~gk~~g~Pl~~LlGg---~-~~~v~~~~~~~---~~------------------~~ 134 (338)
T 3ijl_A 86 SP------KDTAAKAAVDIALHDLVGKLLGAPWYKIWGL---N-KEKTPSTTFTI---GI------------------DT 134 (338)
T ss_dssp CS------CCHHHHHHHHHHHHHHHHHHHTSBHHHHTTC---C-GGGCCBBCCBC---CC------------------CC
T ss_pred cc------CCHHHHHHHHHHHHHHHHHHcCCcHHHHhCC---C-CCCcceEEEEE---eC------------------CC
Confidence 21 2357999999999999999999999999998 3 45666533321 10 12
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccC
Q 011677 220 FGEALQMGSE---TYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYS 295 (479)
Q Consensus 220 ~~ea~~~~~e---~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~ 295 (479)
.++..+...+ +|+.+| .|.| . +.+.+.++.||+++ + .++ +|+|
T Consensus 135 ~e~~~~~a~~~~~g~~~~K----~Kvg-------~--------~~d~~~v~avR~~~---~---~~l~vDaN-------- 181 (338)
T 3ijl_A 135 PDVVRAKTKECAGLFNILK----VKLG-------R--------DNDKEMIETIRSVT---D---LPIAVDAN-------- 181 (338)
T ss_dssp HHHHHHHHHHHHTTCSSEE----EECS-------S--------SCHHHHHHHHHTTC---C---CCEEEECT--------
T ss_pred HHHHHHHHHHHHhcccEEE----EecC-------c--------HHHHHHHHHHHhhc---C---CcEEEECc--------
Confidence 2222222221 344433 4433 1 23566676666554 3 356 9984
Q ss_pred ceeeccCCCCCCCCCCCCC-HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHh
Q 011677 296 TKYDLDFKSPNKSGQNFKS-GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERAT 373 (479)
Q Consensus 296 g~Y~~~~~~~~~~~~~~~t-~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i 373 (479)
+.|| .++++++.. .+++|++.|||||++++|++++++|++++ +||++||+..+ ++++++++
T Consensus 182 ---------------~~~t~~~~A~~~~~-~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~-~~~~~~~~ 244 (338)
T 3ijl_A 182 ---------------QGWKDRQYALDMIH-WLKEKGIVMIEQPMPKEQLDDIAWVTQQSPLPVFADESLQR-LGDVAALK 244 (338)
T ss_dssp ---------------TCCCCHHHHHHHHH-HHHHTTEEEEECCSCTTCHHHHHHHHHTCSSCEEESTTCCS-GGGTGGGB
T ss_pred ---------------CCCCCHHHHHHHHH-HHhhCCCCEEECCCCCCcHHHHHHHHhcCCCCEEECCCCCC-HHHHHHHH
Confidence 3674 899998764 57999999999999999999999999999 99999998765 78888875
Q ss_pred cCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCc
Q 011677 374 LIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQI 440 (479)
Q Consensus 374 ~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~i 440 (479)
+++|++ ++|++++||||++++++++|+++|+++++++ +.|+..+..+.++++....+.
T Consensus 245 --~a~d~i------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~-~~es~i~~aa~~~la~~~~~~ 302 (338)
T 3ijl_A 245 --GAFTGI------NIKLMKCTGMREAWKMVTLAHALGMRVMVGC-MTETSCAISAASQFSPAVDFA 302 (338)
T ss_dssp --TTBSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHTTGGGCSEE
T ss_pred --hhCCEE------EecccccCCHHHHHHHHHHHHHcCCEEEecC-CcccHHHHHHHHHHhccCCcc
Confidence 799999 9999999999999999999999999987754 567766554544444444554
No 112
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=2.2e-36 Score=312.72 Aligned_cols=291 Identities=16% Similarity=0.161 Sum_probs=208.0
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. ++.+ .+++.|+|+|++|++ |+||+..... +.|. ..++...
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~----------G~GE~~~~g~---~~~~---~~~~~~~ 66 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEV----------GLGFIQTLFN---PLPD---QQEIESV 66 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCE----------EEEEEEESSS---CCCC---HHHHHHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCE----------EEEEeccCCC---cccc---HHHHHHH
Confidence 689999988872 3333 356999999999984 9999876311 2233 3456667
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhc--cCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccc
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDK--TEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVP 190 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~--~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp 190 (479)
+++.++|.|+|+|+.++ +..+++ +++++.+..+|++|||+||||+.||..|+|||++||| . + -++|
T Consensus 67 i~~~l~p~l~G~d~~~~------~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLGg---~-~--~~vp 134 (389)
T 2oz8_A 67 FEHEVWPSLKGNRAIAL------VHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLGS---R-R--NRVK 134 (389)
T ss_dssp HHHHTHHHHTTSCHHHH------TTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTTC---S-C--SEEE
T ss_pred HHHHHHHHHcCCCHHHH------HHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCC---C-C--CceE
Confidence 88889999999998665 223321 1122223568999999999999999999999999998 2 2 3566
Q ss_pred eEEeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHH
Q 011677 191 AFTVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVK 270 (479)
Q Consensus 191 ~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~ 270 (479)
+|++ +|.+. .+.++ ..+++.+...++|+.+| .|.| . .+++.+.+.++.||
T Consensus 135 ~y~~--~~~~~---~~~~~---------~~~~a~~~~~~Gf~~vK----ik~g-------~-----~~~~~~~e~v~avR 184 (389)
T 2oz8_A 135 AYAS--GLDFH---LDDDA---------FVSLFSHAASIGYSAFK----IKVG-------H-----RDFDRDLRRLELLK 184 (389)
T ss_dssp EEEE--CCBTT---CCHHH---------HHHHHHHHHHTTCCEEE----EECC-------C-----SSHHHHHHHHHHHH
T ss_pred EEEe--CCCcC---CCHHH---------HHHHHHHHHHhCCCEEE----EccC-------C-----CCHHHHHHHHHHHH
Confidence 6765 33221 12222 24445555455565554 3422 1 12222344444444
Q ss_pred HHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhh--CCceeeecCCCccCHHHHH
Q 011677 271 EAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCAD--YPIVSIEDPFDKEDWEHTK 347 (479)
Q Consensus 271 ~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~--~~i~~iEdP~~~~D~~g~~ 347 (479)
+ .+|.+ ..| +|+| +.||.+++++++. .+++ |++.|||||++++|+++|+
T Consensus 185 ~---a~G~~-~~l~vDan-----------------------~~~~~~~a~~~~~-~l~~~g~~i~~iEqP~~~~~~~~~~ 236 (389)
T 2oz8_A 185 T---CVPAG-SKVMIDPN-----------------------EAWTSKEALTKLV-AIREAGHDLLWVEDPILRHDHDGLR 236 (389)
T ss_dssp T---TSCTT-CEEEEECT-----------------------TCBCHHHHHHHHH-HHHHTTCCCSEEESCBCTTCHHHHH
T ss_pred H---hhCCC-CeEEEECC-----------------------CCCCHHHHHHHHH-HHHhcCCCceEEeCCCCCcCHHHHH
Confidence 4 34644 456 8883 3578899998865 4789 9999999999999999999
Q ss_pred HHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch
Q 011677 348 SVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED 425 (479)
Q Consensus 348 ~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d 425 (479)
+|++++ +||++||+. ++++++++++.+++|+| ++| ||||++++++++|+++|+++|++|++.|
T Consensus 237 ~l~~~~~~iPIa~dE~~--~~~~~~~~i~~~~~d~v------~ik----GGit~a~~i~~~A~~~gi~~~~~~~~~e--- 301 (389)
T 2oz8_A 237 TLRHAVTWTQINSGEYL--DLQGKRLLLEAHAADIL------NVH----GQVTDVMRIGWLAAELGIPISIGNTFLE--- 301 (389)
T ss_dssp HHHHHCCSSEEEECTTC--CHHHHHHHHHTTCCSEE------EEC----SCHHHHHHHHHHHHHHTCCEEECCCGGG---
T ss_pred HHHhhCCCCCEEeCCCC--CHHHHHHHHHcCCCCEE------EEC----cCHHHHHHHHHHHHHcCCeEeecccHHH---
Confidence 999987 999999986 59999999999999999 999 9999999999999999999988755433
Q ss_pred hHHHHhHhhcCC
Q 011677 426 SFIADLSVGLAS 437 (479)
Q Consensus 426 ~~~~dlAv~~~~ 437 (479)
+.+|++.++..
T Consensus 302 -a~lhlaaa~~~ 312 (389)
T 2oz8_A 302 -AGVHMAVALPE 312 (389)
T ss_dssp -TTHHHHHHSTT
T ss_pred -HHHHHHhcCCC
Confidence 56788877643
No 113
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=9.3e-36 Score=307.84 Aligned_cols=289 Identities=16% Similarity=0.084 Sum_probs=200.4
Q ss_pred CceeeEEEEEEEe--------c--CCCC-----ceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHH
Q 011677 44 PSVITKIKARQIL--------D--SRGI-----PTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNR 108 (479)
Q Consensus 44 ~~~I~~I~~~~i~--------d--s~g~-----~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~ 108 (479)
.|+|++|+.+.+- + ++|. ..+.|+|+|+ |++ |+||+... .
T Consensus 11 ~mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~----------G~GE~~~~---------~----- 65 (392)
T 3v5c_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQT----------GYGSSIHM---------T----- 65 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEE----------EEEECCSC---------C-----
T ss_pred CcEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCE----------EEEeecCc---------H-----
Confidence 6799999999982 2 2442 3688999999 994 99997541 0
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcc--
Q 011677 109 AVKNINERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLT-- 186 (479)
Q Consensus 109 av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~-- 186 (479)
+.++|.|+|+||.+.. .. .+.+..+|++|||+||||+.||.+|+|||+|||| ..+.+
T Consensus 66 ------~~l~~~liG~d~~~~~-------~~-----~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLGG---~~r~~~~ 124 (392)
T 3v5c_A 66 ------PEWAEDVIGRRLLDLF-------DD-----RGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSG---AHLETGA 124 (392)
T ss_dssp ------HHHHHTTTTCBGGGGB-------CT-----TSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHSC---CCSCCCC
T ss_pred ------HHHHHHhCCCCHHHHH-------hh-----ccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCC---CCCcccc
Confidence 2578999999997531 11 1234467999999999999999999999999998 33333
Q ss_pred -cccceEEeecCCccCCCcccccceeecc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCC---CCc
Q 011677 187 -LPVPAFTVISGGKHAGNNLAIQDIMILP-IGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPN---ISS 261 (479)
Q Consensus 187 -~Pvp~~~~i~GG~~~~~~l~~~e~~i~p-~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~---~~~ 261 (479)
+++|+|+...| .. + +...+ -| ..+...+++.+...++|+.+| .|.| ..+.+.+. .+.
T Consensus 125 ~v~v~~y~~~~~-~~-~--~~~~~---~~~~~e~~~~~a~~~~~~Gf~~~K----lKvg-------~~~~~~~~~~~~~~ 186 (392)
T 3v5c_A 125 SLVVPCYDTSLY-FD-D--LHLAD---ERAAVALMQEEAMQGYAKGQRHFK----IKVG-------RGGRHMPLWEGTKR 186 (392)
T ss_dssp CEEEEEEEEEEC-BT-T--TTCCC---HHHHHHHHHHHHHHHHHTTCCCEE----EECC-------TTTTTSCHHHHHHH
T ss_pred cceEEEEEeecc-cc-c--ccccc---cccCHHHHHHHHHHHHHCCCCEEE----ECCC-------CCCccccccccHHH
Confidence 34666754221 10 0 00000 00 001123334444444555554 4433 22222221 123
Q ss_pred hHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 262 IREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 262 ~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
+.++++.||+++ |.+ .++ +|+| +.||.++++++.+ .+++|++.|||||++
T Consensus 187 d~~~v~avR~a~---g~~-~~l~vDaN-----------------------~~w~~~~A~~~~~-~L~~~~l~~iEeP~~- 237 (392)
T 3v5c_A 187 DIAIVRGISEVA---GPA-GKIMIDAN-----------------------NAYNLNLTKEVLA-ALSDVNLYWLEAAFH- 237 (392)
T ss_dssp HHHHHHHHHHHH---CTT-CCEEEECT-----------------------TCCCHHHHHHHHH-HTTTSCCCEEECSSS-
T ss_pred HHHHHHHHHHHc---CCC-CcEEeeCC-----------------------CCcCHHHHHHHHH-hcccCCCeEEeCCCC-
Confidence 445555555554 755 466 9984 3678999998754 579999999999999
Q ss_pred cCHHHHHHHHhh-----h-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeE
Q 011677 341 EDWEHTKSVLQI-----C-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGV 414 (479)
Q Consensus 341 ~D~~g~~~L~~~-----~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~ 414 (479)
+|++++++|+++ + +||+.||+.. .++++++++.+++|++ |+|+++ ||||++++++++|+++|+++
T Consensus 238 ~d~~~~~~l~~~~~~~~~~ipIa~gE~~~--~~~~~~li~~~a~dii------~~d~~~-GGitea~kia~~A~~~gv~~ 308 (392)
T 3v5c_A 238 EDEALYEDLKEWLGQRGQNVLIADGEGLA--SPHLIEWATRGRVDVL------QYDIIW-PGFTHWMELGEKLDAHGLRS 308 (392)
T ss_dssp CCHHHHHHHHHHHHHHTCCCEEEECCSSC--CTTHHHHHHTTSCCEE------CCBTTT-BCHHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHHHHhhccCCCCCcEECCCccc--HHHHHHHHHcCCCcEE------EeCCCC-CCHHHHHHHHHHHHHcCCeE
Confidence 699999999986 6 9999999764 6889999999999999 999999 99999999999999999998
Q ss_pred EEecCCCCCch--hHHHHhHhhcC
Q 011677 415 VISHRSGETED--SFIADLSVGLA 436 (479)
Q Consensus 415 ~v~h~~get~d--~~~~dlAv~~~ 436 (479)
++ |+. ++.. ++.+|||.++.
T Consensus 309 ~~-h~~-~s~i~~aa~~hlaaa~p 330 (392)
T 3v5c_A 309 AP-HCY-GNAYGIYASGHLSAAVR 330 (392)
T ss_dssp CC-BCC-SCTHHHHHHHHHGGGCT
T ss_pred Ee-cCC-CcHHHHHHHHHHHHhCC
Confidence 54 654 4544 45667766653
No 114
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=4.4e-35 Score=297.99 Aligned_cols=273 Identities=14% Similarity=0.042 Sum_probs=202.8
Q ss_pred ceeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHH
Q 011677 45 SVITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKN 112 (479)
Q Consensus 45 ~~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~ 112 (479)
|+|++|+.+.+. .+.+ +..+.|+|+|++|++ |+||+.+++. +.|.+++...+...
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~----------G~GE~~~~~~---~~~~~e~~~~~~~~ 68 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNA----------YFGECNAFQT---DWYDHETIASVKHV 68 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCE----------EEEECCCBSS---TTSCSCBHHHHHHH
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCE----------EEEEecCCCC---CcCCCCCHHHHHHH
Confidence 689999988772 2333 246889999999984 9999876532 34778888888788
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 113 INERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 113 i~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+++.+ |.|+|+||.+.+.+|+.|.+.. + ...|++|||+||||+.||..|+ ++|.+
T Consensus 69 l~~~~-~~l~G~d~~~~~~l~~~l~~~~-----g--~~~a~said~ALwDl~gk~~g~-----------------~v~~~ 123 (342)
T 2okt_A 69 IEQWF-EDNRNKSFETYEAALKLVDSLE-----N--TPAARATIVMALYQMFHVLPSF-----------------SVAYG 123 (342)
T ss_dssp HHHHH-HHHTTCCBCSHHHHHHTTGGGT-----T--CHHHHHHHHHHHHHTTCCCCCE-----------------EEECE
T ss_pred HHHHH-HHHcCCCcCCHHHHHHHHHHhh-----c--ChHHHHHHHHHHHHHhhhhhCc-----------------eEeee
Confidence 88766 9999999999999998886541 1 2579999999999999999886 24445
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
..++|. + + ++..+...++|+.+| .| +| .+ +.++++.||++
T Consensus 124 ~~~~g~-------~------------~-e~~~~~~~~G~~~~K----iK-------vg--------~~-d~~~v~avr~~ 163 (342)
T 2okt_A 124 ATASGL-------S------------N-KQLESLKATKPTRIK----LK-------WT--------PQ-IMHQIRVLREL 163 (342)
T ss_dssp EEESSC-------C------------H-HHHHHHHHHCCSEEE----EE-------CC--------TT-HHHHHHHHTTS
T ss_pred EEEecC-------C------------H-HHHHHHHHcCCcEEE----EE-------eC--------HH-HHHHHHHHHHh
Confidence 443221 0 1 111222234455544 34 22 23 45666666544
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ .+ .++ +|+| +.||.+++ ++. +.+++|+|.|||||++++|++++++ +
T Consensus 164 ~----~~-~~l~vDaN-----------------------~~~~~~~A-~~~-~~l~~~~i~~iEqP~~~~d~~~~~~--~ 211 (342)
T 2okt_A 164 D----FH-FQLVIDAN-----------------------ESLDRQDF-TQL-QLLAREQVLYIEEPFKDISMLDEVA--D 211 (342)
T ss_dssp S----SC-CEEEEECT-----------------------TCCCGGGH-HHH-HHHGGGCEEEEECCCSSGGGGGGSC--T
T ss_pred C----CC-CeEEEECC-----------------------CCCCHHHH-HHH-HHHhhCCCcEEECCCCCccHHHHHH--h
Confidence 3 22 356 9984 35677888 765 4579999999999999999999998 6
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchh--HH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDS--FI 428 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~--~~ 428 (479)
++ +||++||+.. ++++++++++.+++|++ |+|++++||||++++++++|+++|++++++++ .|+..+ +.
T Consensus 212 ~~~ipIa~dEs~~-~~~~~~~~i~~~a~d~i------~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~-~es~i~~aa~ 283 (342)
T 2okt_A 212 GTIPPIALDEKAT-SLLDIINLIELYNVKVV------VLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGM-YEYGLSRYFT 283 (342)
T ss_dssp TSSCCEEESTTCC-CHHHHHHHHHHSCCCEE------EECHHHHTSGGGHHHHHHHHHHTTCEEEEBCS-SCCHHHHHHH
T ss_pred cCCCCEEecCCCC-CHHHHHHHHHhCCCCEE------EEChhhcCCHHHHHHHHHHHHHCCCEEEEcCC-cccHHHHHHH
Confidence 67 9999999764 59999999999999999 99999999999999999999999999877655 466554 45
Q ss_pred HHhHhhc
Q 011677 429 ADLSVGL 435 (479)
Q Consensus 429 ~dlAv~~ 435 (479)
+|||.++
T Consensus 284 ~hlaa~~ 290 (342)
T 2okt_A 284 AMLARKG 290 (342)
T ss_dssp HHHHTTS
T ss_pred HHHHHhc
Confidence 5555554
No 115
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=4.7e-34 Score=288.29 Aligned_cols=277 Identities=18% Similarity=0.192 Sum_probs=195.9
Q ss_pred eeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHH
Q 011677 46 VITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNI 113 (479)
Q Consensus 46 ~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i 113 (479)
+|++|+.+.+. .+.+ ++.+.|+|+ ++|++ |+||+.+++ .| +++.......+
T Consensus 3 ~i~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~----------G~GE~~~~~-----~~-g~~~~~~~~~i 65 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELE-EEGIK----------GTGECTPYP-----RY-GESDASVMAQI 65 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CCSEEEEEEEEEE-ETTEE----------EEEEECCCG-----GG-TCCHHHHHHHH
T ss_pred ceEEEEEEEEEecccccEEecCeeEEEeeEEEEEEE-eCCce----------EEEEeeCCC-----Cc-CCCHHHHHHHH
Confidence 46667766662 2222 346889998 78984 999987642 23 44555555556
Q ss_pred HHHHHHhhc-CCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceE
Q 011677 114 NERISEALV-GMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAF 192 (479)
Q Consensus 114 ~~~l~p~Li-G~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~ 192 (479)
+ .+.|.|+ |++ .+.+++.+ . ..+|++|||+||||+.||..|+|||++||| .. .+.|+|.|
T Consensus 66 ~-~~~~~l~~~~~---~~~~~~~~------~-----~~~a~~aid~AlwDl~~k~~g~Pl~~llGg---~~-~~~~~~~~ 126 (324)
T 1jpd_X 66 M-SVVPQLEKGLT---REELQKIL------P-----AGAARNALDCALWDLAARRQQQSLADLIGI---TL-PETVITAQ 126 (324)
T ss_dssp H-TTHHHHHTTCC---HHHHHHHS------C-----SSHHHHHHHHHHHHHHHHTTTCCHHHHHTC---CC-CSEEEBCE
T ss_pred H-HHHHHHhcCCC---HHHHHHhC------c-----cHHHHHHHHHHHHHHHHHHhCCcHHHHhCC---CC-CCCcceeE
Confidence 5 4778774 654 45554432 1 147999999999999999999999999998 22 34677777
Q ss_pred EeecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHH
Q 011677 193 TVISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEA 272 (479)
Q Consensus 193 ~~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~a 272 (479)
++ ++| +. | ...+++.+...++|+++| .|.| . +.+.+.++.||++
T Consensus 127 ~~-~~~-------~~-e--------~~~~~a~~~~~~G~~~~K----iKvg-------~--------~~d~~~v~avr~~ 170 (324)
T 1jpd_X 127 TV-VIG-------TP-D--------QMANSASTLWQAGAKLLK----VKLD-------N--------HLISERMVAIRTA 170 (324)
T ss_dssp EE-CSC-------CH-H--------HHHHHHHHHHHTTCSEEE----EECC-------S--------SCHHHHHHHHHHH
T ss_pred Ee-eCC-------CH-H--------HHHHHHHHHHHcCCCEEE----EEeC-------C--------chHHHHHHHHHHh
Confidence 75 222 11 1 123455555566676665 3433 1 2346677777665
Q ss_pred HHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHh
Q 011677 273 INRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQ 351 (479)
Q Consensus 273 i~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~ 351 (479)
+ + + .++ +|+| +.||.+++++++ +.+++|+|.|||||++++|+++|++++
T Consensus 171 ~---~-~-~~l~vDaN-----------------------~~~~~~~a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~- 220 (324)
T 1jpd_X 171 V---P-D-ATLIVDAN-----------------------ESWRAEGLAARC-QLLADLGVAMLEQPLPAQDDAALENFI- 220 (324)
T ss_dssp C---T-T-SEEEEECT-----------------------TCCCSTTHHHHH-HHHHHTTCCEEECCSCTTSCGGGGSSC-
T ss_pred C---C-C-CEEEEECc-----------------------CCCCHHHHHHHH-HHHHhCCCCEEECCCCCCCHHHHHhcc-
Confidence 4 1 2 356 9984 245667888765 468999999999999999999999885
Q ss_pred hh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHH
Q 011677 352 IC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIAD 430 (479)
Q Consensus 352 ~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~d 430 (479)
+ +||++||+. +++++++++++. +|++ ++|++++||+|++++++++|+++|++++++|+ .|+..+..+.
T Consensus 221 -~~ipIa~dE~~-~~~~~~~~~~~~--~~~i------~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~-~es~i~~aa~ 289 (324)
T 1jpd_X 221 -HPLPICADESC-HTRSNLKALKGR--YEMV------NIKLDKTGGLTEALALATEARAQGFSLMLGCM-LCTSRAISAA 289 (324)
T ss_dssp -CSSCEEESTTC-SSGGGHHHHBTT--BSEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-SCCHHHHHHH
T ss_pred -CCCCEEEcCCC-CCHHHHHHHHhh--CCEE------EEcchhhCcHHHHHHHHHHHHHcCCcEEEeCc-chHHHHHHHH
Confidence 6 999999986 568999999854 8999 99999999999999999999999999987665 5676655544
Q ss_pred hHhhc
Q 011677 431 LSVGL 435 (479)
Q Consensus 431 lAv~~ 435 (479)
++++.
T Consensus 290 ~~la~ 294 (324)
T 1jpd_X 290 LPLVP 294 (324)
T ss_dssp GGGGG
T ss_pred HHHhh
Confidence 44443
No 116
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=99.97 E-value=6.8e-31 Score=264.93 Aligned_cols=264 Identities=15% Similarity=0.066 Sum_probs=190.4
Q ss_pred eeeEEEEEEEe--------cCCC----CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHH
Q 011677 46 VITKIKARQIL--------DSRG----IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNI 113 (479)
Q Consensus 46 ~I~~I~~~~i~--------ds~g----~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i 113 (479)
+|++|+.+.+. .+.+ +..+.|+|+|+ |++ ||||+.++ +.|++++...+...+
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~----------G~GE~~~~-----~~~~~e~~~~~~~~l 65 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-ERE----------GWGEISPL-----PGFSQETWEEAQSVL 65 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEE----------EEEEECCC-----TTTCSSCHHHHHHHH
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeE----------EEEEecCC-----CCCCccCHHHHHHHH
Confidence 57788877773 2222 45789999986 984 99998764 357778888888888
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHhhhccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEE
Q 011677 114 NERISEALVGMDPILQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFT 193 (479)
Q Consensus 114 ~~~l~p~LiG~d~~~~~~id~~l~~~~~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~ 193 (479)
++.+.|.|+|+ .+ +.+ ...|++|||+||||+.||..|+|+|+ ++|+ |
T Consensus 66 ~~~~~~~l~g~--~~----------l~~-------~~~a~~aid~ALwDl~gk~~g~p~~~-----------~v~~--~- 112 (322)
T 1r6w_A 66 LAWVNNWLAGD--CE----------LPQ-------MPSVAFGVSCALAELTDTLPQAANYR-----------AAPL--C- 112 (322)
T ss_dssp HHHHHHHTTSC--CC----------CCS-------SHHHHHHHHHHHHHHTTCSCCCSCCC-----------CCCE--E-
T ss_pred HHHHHHhhCCh--hh----------ccc-------ChHHHHHHHHHHHHhcCCCCCCCccc-----------eEEE--e-
Confidence 88899999998 21 111 24699999999999999999988751 2333 2
Q ss_pred eecCCccCCCcccccceeeccCCCCcHHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHH
Q 011677 194 VISGGKHAGNNLAIQDIMILPIGASSFGEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAI 273 (479)
Q Consensus 194 ~i~GG~~~~~~l~~~e~~i~p~~~~~~~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai 273 (479)
.+ +.+ ...+++.+. ++|+.+| .|.| . .+.+.+.+.++.||+++
T Consensus 113 ---~~-------~~~---------~~~~~a~~~--~G~~~~K----iKvG-------~-----~~~~~d~~~v~avr~~~ 155 (322)
T 1r6w_A 113 ---NG-------DPD---------DLILKLADM--PGEKVAK----VRVG-------L-----YEAVRDGMVVNLLLEAI 155 (322)
T ss_dssp ---CS-------CHH---------HHHHHHHTC--CSSEEEE----EECS-------S-----SCHHHHHHHHHHHHHHC
T ss_pred ---CC-------CHH---------HHHHHHHHh--CCCceEE----EEeC-------C-----CCHHHHHHHHHHHHHhC
Confidence 11 001 112222221 3454444 3433 1 12234455666665544
Q ss_pred HhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhC---CceeeecCCCccCHHHHHHH
Q 011677 274 NRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADY---PIVSIEDPFDKEDWEHTKSV 349 (479)
Q Consensus 274 ~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~---~i~~iEdP~~~~D~~g~~~L 349 (479)
+ + .++ +|+| +.||.++++++. +.+++| ++.|||||++ ++++|++|
T Consensus 156 ---~-~-~~l~vDaN-----------------------~~~~~~~A~~~~-~~l~~~~~~~i~~iEqP~~--~~~~~~~l 204 (322)
T 1r6w_A 156 ---P-D-LHLRLDAN-----------------------RAWTPLKGQQFA-KYVNPDYRDRIAFLEEPCK--TRDDSRAF 204 (322)
T ss_dssp ---T-T-EEEEEECT-----------------------TCBCHHHHHHHH-HTSCTTTGGGEEEEECCBS--SHHHHHHH
T ss_pred ---C-C-CeEEEeCC-----------------------CCCCHHHHHHHH-HHhhhhccCCeeEEECCCC--ChHHHHHH
Confidence 2 2 345 9984 367889999875 567998 9999999997 58899999
Q ss_pred Hhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCc--hh
Q 011677 350 LQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETE--DS 426 (479)
Q Consensus 350 ~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~--d~ 426 (479)
++++ +||++||+..+ .+ + +.++.+++|++ ++|++++||+|++++++++|+++|++++++|+. |+. .+
T Consensus 205 ~~~~~ipIa~dE~~~~-~~-~-~~~~~~a~d~i------~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~-es~ig~a 274 (322)
T 1r6w_A 205 ARETGIAIAWDESLRE-PD-F-AFVAEEGVRAV------VIKPTLTGSLEKVREQVQAAHALGLTAVISSSI-ESSLGLT 274 (322)
T ss_dssp HHHHCCCEEESGGGGS-TT-C-CCCCCTTEEEE------EECHHHHCCHHHHHHHHHHHHHTTCEEEEBCSS-CCHHHHH
T ss_pred HHhCCCCEEeCCCCCC-hh-H-hhhhcCCCCEE------EECchhcCCHHHHHHHHHHHHHcCCcEEEECcc-ccHHHHH
Confidence 9999 99999998766 44 5 66789999999 999999999999999999999999999887765 665 46
Q ss_pred HHHHhHhhcC
Q 011677 427 FIADLSVGLA 436 (479)
Q Consensus 427 ~~~dlAv~~~ 436 (479)
+.+|||.++.
T Consensus 275 a~~hlaa~~~ 284 (322)
T 1r6w_A 275 QLARIAAWLT 284 (322)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 7788887774
No 117
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=99.97 E-value=6.2e-30 Score=258.66 Aligned_cols=268 Identities=15% Similarity=0.124 Sum_probs=183.2
Q ss_pred CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhh
Q 011677 61 IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLD 140 (479)
Q Consensus 61 ~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~ 140 (479)
..+|.|+|+ ++|++ ||||+.+++ .| +++.+++...++....+.+.|.+. +..+ ...
T Consensus 30 ~~~v~V~i~-d~G~~----------G~GE~~p~~-----~~-get~e~~~~~l~~~~~~~~~~~~~---~~~~----~~~ 85 (329)
T 4gfi_A 30 ADVVTCTIR-DGSFT----------GIGECVPYP-----RY-GESIEGVTADIEAMADRVAAGLTR---QELQ----QVM 85 (329)
T ss_dssp EEEEEEEEE-ETTEE----------EEEEECCCG-----GG-TCCHHHHHHHHHTTHHHHHHTCCH---HHHH----HHS
T ss_pred eEEEEEEEE-ECCEE----------EEEeccCCC-----CC-CcCHHHHHHHHHHHhhhhccccch---hhHH----hhc
Confidence 346888985 78984 999998752 34 577888888787766777767543 2222 111
Q ss_pred ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcH
Q 011677 141 KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSF 220 (479)
Q Consensus 141 ~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~ 220 (479)
+ + ..|++|||+||||+.||..|+|+|++||| ..+.++|+ +..++.+ +.
T Consensus 86 ~--~-----~~a~aaid~AlwDl~gk~~g~pl~~llgG---~~~~~v~~--~~~~~~~--------------------~~ 133 (329)
T 4gfi_A 86 K--P-----GAARNAVDCALWDLEAKMSGKRAAEQVLG---QPAQPLVT--AYTISLA--------------------DP 133 (329)
T ss_dssp C--S-----SHHHHHHHHHHHHHHHHHHSCCHHHHHHS---SCCCCEEC--CEEECCC--------------------CH
T ss_pred c--c-----HHHHHHHHHHHHHHHhhhcCCChhHHhCC---CCCCceee--eecccCC--------------------Ch
Confidence 1 1 35999999999999999999999999998 33344444 4433221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceee
Q 011677 221 GEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYD 299 (479)
Q Consensus 221 ~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~ 299 (479)
++......+ ..|....+++. + + .++.+.++.+|+ +|.+ .++ ||+|
T Consensus 134 ~~~~~~~~~-----------~~~~~~~Kik~--g--~--~~d~~~v~~vr~----~g~d-~~l~vDaN------------ 179 (329)
T 4gfi_A 134 DTMAAKTAE-----------NAGRPLLKIKT--G--T--ADDEARLRAVRA----AAPE-ARIIIDAN------------ 179 (329)
T ss_dssp HHHHHHHHH-----------TTTSSEEEEEC--C--S--SCCHHHHHHHHH----HCTT-SEEEEECT------------
T ss_pred HHHHHHHHh-----------hccccEEEecC--C--c--ccHHHHHHHHHH----hccC-CeEEEEcC------------
Confidence 121111111 11222222221 0 1 235677766654 3544 456 9984
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCC
Q 011677 300 LDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLA 378 (479)
Q Consensus 300 ~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~ 378 (479)
+.||.++++++. +.+++|++.|||||++++|.+++. +.+. +||+.||+..+ ++++.+. .+++
T Consensus 180 -----------~~w~~~~A~~~~-~~l~~~~i~~iEqP~~~~~~~~~~--~~~~~ipia~dEs~~~-~~d~~~~--~~a~ 242 (329)
T 4gfi_A 180 -----------EGWNDDNIEYYL-KLAAELKISLIEQPLPAGKDAMLA--RIEHPVLICADESVHS-TEDLAGL--RDRY 242 (329)
T ss_dssp -----------TCCCTTTHHHHH-HHHHHTTCCEEECCSCTTSCGGGG--GSCCSSEEEESTTCCT-GGGSGGG--TTTC
T ss_pred -----------CCCCHHHHHHHH-HhhhhcCceEEEecCCCccHHHHH--HhcCCCCchhccCCCC-HHHHHHH--hhcc
Confidence 356778888765 557999999999999999987653 4455 99999998654 7777664 4689
Q ss_pred ceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCccc
Q 011677 379 MLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKA 442 (479)
Q Consensus 379 d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~ 442 (479)
|++ |+|++++||||++++++++|+++|+++|++++ .|+..+..+.++++...+++-.
T Consensus 243 d~i------~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~es~i~~aa~~~la~~~~~~dl 299 (329)
T 4gfi_A 243 DAI------NIKLDKTGGLTEALVMKAEAERLGFTIMVGCM-LGTSLGMAPAVLVAQGTAFADL 299 (329)
T ss_dssp SEE------EECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-SCCHHHHHHHHHHTTTCSEECC
T ss_pred CeE------EecCceeCCHHHHHHHHHHHHHCCCEEEECCc-chhHHHHHHHHHHHhCCCeecc
Confidence 999 99999999999999999999999999987654 5776666666666655666543
No 118
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=99.96 E-value=3.1e-30 Score=261.14 Aligned_cols=284 Identities=15% Similarity=0.119 Sum_probs=190.1
Q ss_pred CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhh
Q 011677 61 IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLD 140 (479)
Q Consensus 61 ~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~ 140 (479)
+..+.|+|+|++|++ |+||+.++ +.|.++++.+++..+ +.+.|.| +|.+.+.+|+ .
T Consensus 28 ~~~~lV~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~~~~~~-~~l~~~l---~~~~~~~~~~---~-- 83 (332)
T 2ozt_A 28 RSGIYLRLEDEQGQV----------GYGEIAPL-----PGWGSETLNADIALC-QQLPGHL---TPEIMATIPE---A-- 83 (332)
T ss_dssp EEEEEEEEECTTSCE----------EEEEECCC-----TTSSSCCHHHHHHHH-HHSCSEE---CHHHHTTSCT---T--
T ss_pred eeEEEEEEEECCCCE----------EEEEecCC-----CCCCcccHHHHHHHH-HHhhccC---CHHHHHHHHH---H--
Confidence 457899999999984 99998764 346777777776654 3455544 4433222221 1
Q ss_pred ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcH
Q 011677 141 KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSF 220 (479)
Q Consensus 141 ~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~ 220 (479)
+ ..|++|||+||| +.|| ||+ ..+ + +.|+...+ ......
T Consensus 84 -------~-~~a~~aid~Al~-l~gk---------lgg---~~~---~-~~y~~~~~-----------------~~e~~~ 121 (332)
T 2ozt_A 84 -------L-PAAQFGFATAWQ-SVGR---------LPY---RVR---P-WPICALLG-----------------SGQAAL 121 (332)
T ss_dssp -------C-HHHHHHHHHHHH-HTTT---------CSC---CCC---C-CCBCEEEC-----------------TGGGHH
T ss_pred -------h-HHHHHHHHHHHH-Hhcc---------cCC---CCC---C-cceEEecC-----------------ChHHHH
Confidence 1 248899999999 7777 454 222 3 33432111 112234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceee
Q 011677 221 GEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYD 299 (479)
Q Consensus 221 ~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~ 299 (479)
+++.+...++|+.+| .|.| . .+.+.+.+.++.||+++ |.+ .++ +|+|
T Consensus 122 ~~a~~~~~~G~~~~K----iKvg-------~-----~~~~~d~~~v~avr~~~---g~~-~~L~vDaN------------ 169 (332)
T 2ozt_A 122 EQWQQSWQRGQTTFK----WKVG-------V-----MSPEEEQAILKALLAAL---PPG-AKLRLDAN------------ 169 (332)
T ss_dssp HHHHHHHHTTCCEEE----EECS-------S-----SCHHHHHHHHHHHHHHS---CTT-CEEEEECT------------
T ss_pred HHHHHHHHcCCcEEE----EEeC-------C-----CChHHHHHHHHHHHHHc---CCC-CEEEEccc------------
Confidence 455555555665555 4533 1 11223345555555544 654 456 8984
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHhhC---CceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcC
Q 011677 300 LDFKSPNKSGQNFKSGEDMIEMYKELCADY---PIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLI 375 (479)
Q Consensus 300 ~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~---~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~ 375 (479)
+.||.+++++++.. +++| +|.|||||++++|+++|++|++++ +||++||+. .++++++++++.
T Consensus 170 -----------~~~~~~~A~~~~~~-l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dEs~-~~~~~~~~~~~~ 236 (332)
T 2ozt_A 170 -----------GSWDRATANRWFAW-LDRHGNGKIEYVEQPLPPDQWQALLSLAQTVTTAIALDESV-VSAAEVQRWVDR 236 (332)
T ss_dssp -----------TCCCHHHHHHHHHH-HHHHCCTTEEEEECCSCTTCHHHHHHHHHHCSSCEEESTTC-CSHHHHHHHHHT
T ss_pred -----------CCCCHHHHHHHHHH-HHhhccCCcceeECCCCCCCHHHHHHHHHhCCCCEEeCCCC-CCHHHHHHHHHh
Confidence 36789999988755 7999 999999999999999999999999 999999975 469999999999
Q ss_pred CCCceecccCCCCcCccccccHHHHHHHHHHHhhC--CCeEEEecCCCCCch--hHHHHhHhhcCCCCcccCCCCc----
Q 011677 376 PLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDV--PWGVVISHRSGETED--SFIADLSVGLASGQIKAGAPCR---- 447 (479)
Q Consensus 376 ~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~--g~~~~v~h~~get~d--~~~~dlAv~~~~~~ik~G~~~~---- 447 (479)
+++|++ ++|++++||++ +++++|+++ |+++|++|+. ||.. ++.+|||.++.+. ..+| ...
T Consensus 237 ~a~~~i------~ik~~~~GGi~---~i~~~A~~~~~gi~~~~~~~~-es~i~~aa~~hlaa~~~~~-~~~g-l~t~~~~ 304 (332)
T 2ozt_A 237 GWPGFF------VIKTALFGDPD---SLSLLLRRGLEPQRLVFSSAL-EGAIARTAIFHLLETWQPC-HALG-FGVDRWR 304 (332)
T ss_dssp TCCSEE------EECHHHHSCHH---HHHHHHHTTCCGGGEEEBCCS-CCHHHHHHHHHHHHHHCCC-SCBB-CCCTTTC
T ss_pred CCCCEE------EEChhhhCCHH---HHHHHHHHhCCCCcEEEeCCc-chHHHHHHHHHHHHhCCCC-cCCc-CCchhhc
Confidence 999999 99999999998 678899999 9999998774 7755 4577888876532 1222 111
Q ss_pred -hhHHHHhHHHHHHHHHhCCC
Q 011677 448 -GERLAKYNQLLHIEEELGDH 467 (479)
Q Consensus 448 -~er~~kyn~ll~ie~~l~~~ 467 (479)
.+----+|..-++++..++.
T Consensus 305 ~~~g~l~~~~~~~~w~~~~~~ 325 (332)
T 2ozt_A 305 SAPLLTTLTAYERLWERLDQE 325 (332)
T ss_dssp CCCCCCSHHHHHHHHHTC---
T ss_pred ccCCcccccCHHHHHHHhhhc
Confidence 00001156666788776654
No 119
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=99.95 E-value=1.2e-28 Score=249.21 Aligned_cols=236 Identities=11% Similarity=0.029 Sum_probs=166.0
Q ss_pred CceEEEEEEeCCCceeeecCCCCCCCceeeeeeccCCCCccccccHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhhh
Q 011677 61 IPTVEVDLFTHKGMFRASVPSGDPSGMYEALELRDGDKGTYLGNSVNRAVKNINERISEALVGMDPILQSQIDQAMIDLD 140 (479)
Q Consensus 61 ~~~v~V~v~t~~G~~~~~~ps~~~~G~~Ea~~~~d~~~~~y~g~~~~~av~~i~~~l~p~LiG~d~~~~~~id~~l~~~~ 140 (479)
++.+.|+|+|++|++ |+||+.++ +.|.++++.. .+.+ .| |
T Consensus 26 ~~~~~V~v~td~G~~----------G~GE~~~~-----~~~~~e~~~~---~l~~----~l--------------l---- 65 (330)
T 3caw_A 26 REGVLLKVEWNDGLY----------GFADLHPW-----PELGDLSLEE---QLSD----LR--------------M---- 65 (330)
T ss_dssp EEEEEEEEECTTSCE----------EEEEECCC-----GGGTCCCHHH---HHHH----HH--------------H----
T ss_pred eeEEEEEEEECCCCE----------EEEeecCC-----CCcCcccHHH---HHHH----HH--------------h----
Confidence 457899999999984 99998764 2356666543 2332 22 1
Q ss_pred ccCCCCchhhhHHHHHHHHHHHHHHHhcCchhHHHHhcccCCCCcccccceEEeecCCccCCCcccccceeeccCCCCcH
Q 011677 141 KTEKKGELGANAILAVSIAACKAGAAEKEVPLYKHIADLAGKTNLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGASSF 220 (479)
Q Consensus 141 ~~~~~~~~g~~A~~AvsiAl~da~ak~~g~PLy~lLgg~~~~~~~~~Pvp~~~~i~GG~~~~~~l~~~e~~i~p~~~~~~ 220 (479)
+. ....|++|||+||||+.||..|+|||+ || .++|+ |..+++..+ . +.+
T Consensus 66 ~~-----~~~~a~said~AlwDl~gk~~g~Pl~~--Gg------~~v~~--~~~~~~~~~--~--~~~------------ 114 (330)
T 3caw_A 66 GR-----MTTQIEQSIWLARRDALLRKEKKHVFD--GG------EKIKN--NYLLSHFQD--L--KPG------------ 114 (330)
T ss_dssp TC-----CCHHHHHHHHHHHHHHHHHHTTCBTTT--TS------CCCCB--CEEECTTSC--C--CTT------------
T ss_pred cc-----chHHHHHHHHHHHHHHHHHHcCCcccc--CC------CceEE--EEEecCCCC--C--CHH------------
Confidence 11 225799999999999999999999999 65 24455 444321000 0 011
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCCCCCCCchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceee
Q 011677 221 GEALQMGSETYHHLKAVIAEKYGAHGCNVGEDGGLAPNISSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYD 299 (479)
Q Consensus 221 ~ea~~~~~e~~~~lk~~l~~K~G~~~~~vg~~G~~~~~~~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~ 299 (479)
+..+...++|+.+| .|.| . +.+.+.++++.||+ .+ .++ +|+|
T Consensus 115 -~~~~~~~~G~~~~K----iKvg-------~------~~~~d~~~v~avr~------~~-~~l~vDaN------------ 157 (330)
T 3caw_A 115 -FLDGLKNEGYNTVK----VKMG-------R------DLQKEADMLTHIAA------SG-MRMRLDFN------------ 157 (330)
T ss_dssp -HHHHHHHHTCCEEE----EECS-------S------CHHHHHHHHHHHHH------TT-CEEEEECT------------
T ss_pred -HHHHHHHcCCcEEE----EecC-------C------CHHHHHHHHHHHhC------CC-CeEEEECC------------
Confidence 11133345566665 4533 1 12233444444443 22 356 9984
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHhh---CCceeeecCCCcc-CHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcC
Q 011677 300 LDFKSPNKSGQNFKSGEDMIEMYKELCAD---YPIVSIEDPFDKE-DWEHTKSVLQICQQVVGDDLLMSNPKRIERATLI 375 (479)
Q Consensus 300 ~~~~~~~~~~~~~~t~~e~i~~~~~ll~~---~~i~~iEdP~~~~-D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~ 375 (479)
+.||.++++++.. .+++ |++.|||||++++ |++++ |+ +++||++||+ ++++++++++.
T Consensus 158 -----------~~~~~~~A~~~~~-~l~~~~~~~l~~iEqP~~~~~d~~~~--l~-~~iPIa~dEs---~~~~~~~~i~~ 219 (330)
T 3caw_A 158 -----------ALGSWQTFEKFMV-NLPLTVRPLIEYVEDPFPFDFHAWGE--AR-KLAKIALDNQ---YDKVPWGKIAS 219 (330)
T ss_dssp -----------TCSCHHHHHHHHH-TSCTTTGGGEEEEECCSSCCHHHHHH--HT-TTSCEEESTT---GGGCCTTTCSS
T ss_pred -----------CCCCHHHHHHHHH-HhhhhccCCceEEECCCCCCccHHHH--HH-hcCcEEeCCC---CHHHHHHHHHc
Confidence 3678999998764 5788 9999999999999 99999 77 3399999997 48999999999
Q ss_pred CCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCch--hHHHHhHh
Q 011677 376 PLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETED--SFIADLSV 433 (479)
Q Consensus 376 ~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d--~~~~dlAv 433 (479)
+++|++ |+|++++ |+| +++++|+++|+++++++ +.|+.. ++.+|||.
T Consensus 220 ~a~d~v------~~k~~~~-Gi~---~i~~~A~~~gi~~~~~~-~~es~ig~aa~~hlaa 268 (330)
T 3caw_A 220 APFDVI------VIKPAKT-DVD---KAVAQCQKWNLKLAVTS-YMDHPVGVVHAVGVAM 268 (330)
T ss_dssp CSCSEE------EECTTTS-CHH---HHHHHHHHTTCEEEEBC-CSCCHHHHHHHHHHHH
T ss_pred CCCCEE------Eechhhc-cHH---HHHHHHHHcCCcEEEeC-ccCcHHHHHHHHHHHc
Confidence 999999 9999999 999 99999999999986654 457654 46678877
No 120
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=99.86 E-value=8e-22 Score=198.82 Aligned_cols=137 Identities=17% Similarity=0.196 Sum_probs=101.5
Q ss_pred CchHHHHHHHHHHHHhcCCCCCce-eecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCC
Q 011677 260 SSIREGLDLVKEAINRTGIPSSKW-SDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPF 338 (479)
Q Consensus 260 ~~~~~~l~~v~~ai~~~g~~~~~i-iD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~ 338 (479)
+.+.+.++.||+++ |.+ .++ +|+| +.||.++++++. +.+++|+|.|||||+
T Consensus 108 ~~d~~~v~avR~~~---G~~-~~L~vDaN-----------------------~~w~~~~A~~~~-~~L~~~~l~~iEqP~ 159 (327)
T 2opj_A 108 ANDVARVEAVRDAL---GPR-GRVRIDVN-----------------------GAWDVDTAVRMI-RLLDRFELEYVEQPC 159 (327)
T ss_dssp -CHHHHHHHHHHHH---CTT-SEEEEECT-----------------------TCSCHHHHHHHH-HHHGGGCEEEEECCS
T ss_pred HHHHHHHHHHHHHh---CCC-CEEEEECC-----------------------CCCCHHHHHHHH-HHHHhcCCcEEeCCC
Confidence 45567777777776 644 456 9984 367889999875 457999999999999
Q ss_pred CccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEe
Q 011677 339 DKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 339 ~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~ 417 (479)
+ +++++++|++++ +||++||+.. ++++++++++.+++|++ |+|++++||||+++++++ .+|++++++
T Consensus 160 ~--~~~~~~~l~~~~~iPIa~dEs~~-~~~~~~~~i~~~a~d~i------~ik~~~~GGit~~~~ia~---~~gi~~~~~ 227 (327)
T 2opj_A 160 A--TVDELAEVRRRVSVPIAADESIR-RAEDPLRVRDAEAADVV------VLKVQPLGGVRAALRLAE---ECGLPVVVS 227 (327)
T ss_dssp S--SHHHHHHHHHHCSSCEEC------------CTTTTTCCSBE------EECHHHHTSHHHHHHHHH---HTCSCEEEB
T ss_pred C--CHHHHHHHHhhCCCCEEcCCCCC-CHHHHHHHHHhCCCCEE------EeCccccCCHHHHHHHHH---HcCCcEEEc
Confidence 7 589999999999 9999999865 58999999999999999 999999999999998864 469998776
Q ss_pred cCCCCCchh--HHHHhHhhcCC
Q 011677 418 HRSGETEDS--FIADLSVGLAS 437 (479)
Q Consensus 418 h~~get~d~--~~~dlAv~~~~ 437 (479)
++ .|+..+ +.+|||.++..
T Consensus 228 ~~-~es~ig~aa~~hlaaa~~~ 248 (327)
T 2opj_A 228 SA-VETSVGLAAGVALAAALPE 248 (327)
T ss_dssp CC-SCCHHHHHHHHHHHHHSSC
T ss_pred CC-CcCHHHHHHHHHHHHhCCC
Confidence 55 576554 45677766543
No 121
>4f9k_A CAMP-dependent protein kinase type I-beta regulat subunit; structural genomics, PSI-biology; 2.80A {Homo sapiens} PDB: 2ezw_A 3im3_A 3im4_A
Probab=97.99 E-value=3.5e-06 Score=67.04 Aligned_cols=40 Identities=20% Similarity=0.414 Sum_probs=38.2
Q ss_pred hHHHHHhccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhc
Q 011677 3 VQEYLNKHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKA 42 (479)
Q Consensus 3 ~~~y~~~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~ 42 (479)
+++|+++|+|++.|++++-+++..||+||+.||++||.++
T Consensus 40 ce~YlqkhgI~eLLqe~tv~Ll~~RPeDPv~FLaeYF~kL 79 (95)
T 4f9k_A 40 CELYVQLHGIQQVLKDCIVHLCISKPERPMKFLREHFEKL 79 (95)
T ss_dssp THHHHHHTCTTTTTHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999964
No 122
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=97.20 E-value=9.7e-05 Score=52.75 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=37.2
Q ss_pred chHHHHHhccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhcC
Q 011677 2 SVQEYLNKHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKAV 43 (479)
Q Consensus 2 ~~~~y~~~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~~ 43 (479)
|++.|.--++++..|++...+++.++|.||+.|.++||.++.
T Consensus 5 ~~~~~~ip~~l~~lL~~~~~evlr~qP~Di~~Faa~yF~~l~ 46 (50)
T 2kyg_A 5 SMSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR 46 (50)
T ss_dssp TTCCCCCCTTHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred ccchhcCCccHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 445566788999999999999999999999999999999753
No 123
>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens}
Probab=97.14 E-value=0.00053 Score=49.68 Aligned_cols=40 Identities=15% Similarity=0.444 Sum_probs=35.0
Q ss_pred chHHHHHhccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhc
Q 011677 2 SVQEYLNKHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKA 42 (479)
Q Consensus 2 ~~~~y~~~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~ 42 (479)
.+.+|+.++ |-..|-++|.++.++||.||+.|||+|+-+.
T Consensus 8 p~R~YL~~~-V~p~L~~GL~~lak~rP~DPi~~LA~~Ll~~ 47 (55)
T 3g36_A 8 PTRAYLDQT-VVPILLQGMAVLAKERPPNPIEFLASYLLKN 47 (55)
T ss_dssp CHHHHHHTT-THHHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cHHHHHHHH-hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 467899776 7778889999999999999999999999864
No 124
>2izx_A CAMP-dependent protein kinase type II-alpha regulatory subunit; CAMP-binding, phosphorylation, nucleotide-binding, PKA, CAMP, anchor, kinase, acetylation; 1.3A {Homo sapiens} PDB: 2hwn_A
Probab=97.07 E-value=0.0004 Score=47.32 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=32.1
Q ss_pred hccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhcC
Q 011677 9 KHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKAV 43 (479)
Q Consensus 9 ~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~~ 43 (479)
-++++..|++...+++.++|.|++.+.++||.++.
T Consensus 4 p~~l~~lL~~~~~~vl~~qP~di~~f~a~yF~~l~ 38 (41)
T 2izx_A 4 PPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR 38 (41)
T ss_dssp CTTHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999753
No 125
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=96.83 E-value=0.00052 Score=49.69 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=34.0
Q ss_pred HHHHhccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhcC
Q 011677 5 EYLNKHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKAV 43 (479)
Q Consensus 5 ~y~~~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~~ 43 (479)
.|.--++++..|++...+++.++|.||+.|.++||.++.
T Consensus 3 ~~~ip~~l~~lL~~f~~evlr~qP~Di~~Faa~YF~~L~ 41 (54)
T 2izy_A 3 HIQIPPGLTELLQGYTVEVLRQQPPDLVDFAVEYFTRLR 41 (54)
T ss_dssp --CCCTTHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 455578899999999999999999999999999999754
No 126
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.79 E-value=0.044 Score=54.50 Aligned_cols=131 Identities=18% Similarity=0.105 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCc-cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDK-EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI 391 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~-~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~ 391 (479)
+.+..++...+ +.+.+-..+--.++. ++-+.+.++++++ +|+++|-.| +++.+...++.+ +|.+ .|.|
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlvaDiHf--~~~lal~a~e~G-~dkl------RINP 113 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHF--APSYAFLSMEKG-VHGI------RINP 113 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEEEECCS--CHHHHHHHHHTT-CSEE------EECH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEEEeCCC--CHHHHHHHHHhC-CCeE------EECC
Confidence 55666655555 566676666666654 6678999999999 999999754 578777777654 8889 9999
Q ss_pred cccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhC
Q 011677 392 NQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELG 465 (479)
Q Consensus 392 ~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~ 465 (479)
..+|.-....++++.|+++|+++.+|-++|.-+..... |.|.|.....+.---+.+++.|+++
T Consensus 114 GNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~-----------~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 114 GNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLE-----------KYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp HHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHH-----------HHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHH-----------hcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 99999888899999999999999999777654433222 2234433334444444555555553
No 127
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=91.50 E-value=0.78 Score=45.74 Aligned_cols=68 Identities=13% Similarity=0.002 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCC------------CccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCC
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPF------------DKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLA 378 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~------------~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~ 378 (479)
.++.++.+++. +.+++.++.||+-.. +..+++..+++++.+ +||++.... +++++++++++.+.+
T Consensus 235 g~~~~~~~~la-~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi-~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 235 GWSLEDTLAFA-RRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLI-TTPEQAETLLQAGSA 312 (349)
T ss_dssp SCCHHHHHHHH-HHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSC-CCHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCC-CCHHHHHHHHHCCCc
Confidence 56888888764 567899999998542 224677788999988 998877754 459999999999999
Q ss_pred cee
Q 011677 379 MLF 381 (479)
Q Consensus 379 d~v 381 (479)
|.|
T Consensus 313 D~V 315 (349)
T 3hgj_A 313 DLV 315 (349)
T ss_dssp SEE
T ss_pred eEE
Confidence 998
No 128
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=90.38 E-value=0.0027 Score=64.44 Aligned_cols=41 Identities=20% Similarity=0.389 Sum_probs=38.3
Q ss_pred hHHHHHhccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhcC
Q 011677 3 VQEYLNKHMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKAV 43 (479)
Q Consensus 3 ~~~y~~~~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~~ 43 (479)
.+.|+++|+|++.|++++-+++.++|+||+.|+.+||.+.-
T Consensus 18 ~~~y~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~l~ 58 (381)
T 4din_B 18 CELYVQLHGIQQVLKDCIVHLCISKPERPMKFLREHFEKLE 58 (381)
T ss_dssp SCCCSSSSCCSCCCCCCCSCSSCSSSSCSSTTSSSCSCSSC
T ss_pred HHHHhhhhChHHHHHHHHHHHHHHCCCcHHHHHHHHHHHhh
Confidence 46799999999999999999999999999999999999854
No 129
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=88.88 E-value=1.1 Score=44.49 Aligned_cols=68 Identities=9% Similarity=-0.060 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHHHHHhhCCceeee--------c--CCCc-cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCc
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIE--------D--PFDK-EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAM 379 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iE--------d--P~~~-~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d 379 (479)
.++.++.+++. +.+++.++.||+ + |..+ .+++..+++++.+ +||++.... ++++++.++++.+.+|
T Consensus 225 g~~~~~~~~~a-~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi-~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 225 GLDIADHIGFA-KWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMI-TDGSMAEEILQNGRAD 302 (338)
T ss_dssp SCCHHHHHHHH-HHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSC-CSHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCC-CCHHHHHHHHHcCCce
Confidence 56788888764 567899999988 2 3333 3677788999998 998876654 4599999999999999
Q ss_pred ee
Q 011677 380 LF 381 (479)
Q Consensus 380 ~v 381 (479)
.|
T Consensus 303 ~V 304 (338)
T 1z41_A 303 LI 304 (338)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 130
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=85.42 E-value=2.3 Score=41.08 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=79.3
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCC---------CccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPF---------DKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~---------~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.++.++++. .+++.++..||--+ -.++++-.+.+++.. ++++.= ..+.++++++++.+ ++.|
T Consensus 22 ~~~~e~k~~i~~-~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l---~~n~~~i~~a~~~G-~~~V 96 (295)
T 1ydn_A 22 FVPTADKIALIN-RLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVL---VPNMKGYEAAAAAH-ADEI 96 (295)
T ss_dssp CCCHHHHHHHHH-HHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEE---CSSHHHHHHHHHTT-CSEE
T ss_pred CcCHHHHHHHHH-HHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHCC-CCEE
Confidence 468899998764 57899999999843 125666667776543 444321 14688899988876 4555
Q ss_pred cccCCCCcC-------------ccccccHHHHHHHHHHHhhCCCeEE--EecCC-----CCCchhHHHHh---HhhcCCC
Q 011677 382 FSRYPSNLW-------------INQIGTVTEAIEVVKLANDVPWGVV--ISHRS-----GETEDSFIADL---SVGLASG 438 (479)
Q Consensus 382 ~~~~~~~ik-------------~~~~Ggitea~~i~~~A~~~g~~~~--v~h~~-----get~d~~~~dl---Av~~~~~ 438 (479)
.+. .+.-.-+..+.+++++|+++|+.+. +++.. +.++..++.++ +..+|+.
T Consensus 97 ------~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d 170 (295)
T 1ydn_A 97 ------AVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCH 170 (295)
T ss_dssp ------EEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCS
T ss_pred ------EEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCC
Confidence 444 2233356666777899999999986 55432 23444554444 4477887
Q ss_pred CcccCCC
Q 011677 439 QIKAGAP 445 (479)
Q Consensus 439 ~ik~G~~ 445 (479)
.+.+.+.
T Consensus 171 ~i~l~Dt 177 (295)
T 1ydn_A 171 EVSLGDT 177 (295)
T ss_dssp EEEEEET
T ss_pred EEEecCC
Confidence 7764433
No 131
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=84.82 E-value=3.3 Score=41.06 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecC----------C-CccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCc
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDP----------F-DKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAM 379 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP----------~-~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d 379 (479)
.++.++.+++. +.+++. +.||+-. . +..+++-.+++++.+ +||++.... +++++++++++.+.+|
T Consensus 226 g~~~~~~~~~a-~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi-~t~e~Ae~~l~~G~aD 302 (343)
T 3kru_A 226 GINIDMMVEYI-NMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLI-TTQELAEEILSNERAD 302 (343)
T ss_dssp SCCHHHHHHHH-HHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSC-CCHHHHHHHHHTTSCS
T ss_pred CccHHHHHHHH-HHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeee-eHHHHHHHHHhchhhH
Confidence 46788888764 567888 9998863 1 223667778888888 887766544 4599999999999999
Q ss_pred ee
Q 011677 380 LF 381 (479)
Q Consensus 380 ~v 381 (479)
.|
T Consensus 303 ~V 304 (343)
T 3kru_A 303 LV 304 (343)
T ss_dssp EE
T ss_pred HH
Confidence 98
No 132
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=84.82 E-value=8.9 Score=36.45 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccc
Q 011677 316 EDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIG 395 (479)
Q Consensus 316 ~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~G 395 (479)
.+-.+.+.+.+++++|-++=+|+++.+.+-..++ -....|.+.+. +|...++.+.. .---| ++|-+..|
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIga~~~--~n~~ll~~~a~--~~kPV------~lk~G~~~ 141 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQIGARNS--QNFELLKEVGK--VENPV------LLKRGMGN 141 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEEECGGGT--TCHHHHHHHTT--SSSCE------EEECCTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEEECcccc--cCHHHHHHHHh--cCCcE------EEecCCCC
Confidence 5555567888899999999999999998887777 22266666663 45665666644 34567 88999999
Q ss_pred cHHHHHHHHHHHhhCCC-eEEEecC
Q 011677 396 TVTEAIEVVKLANDVPW-GVVISHR 419 (479)
Q Consensus 396 gitea~~i~~~A~~~g~-~~~v~h~ 419 (479)
++.+++.++...+..|- .+++-|+
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~R 166 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCER 166 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 99999999999998885 6777774
No 133
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=82.49 E-value=2.8 Score=45.28 Aligned_cols=68 Identities=9% Similarity=-0.048 Sum_probs=51.4
Q ss_pred CCCHHHHHHHHHHHHhhCCceeee-------cCCC--------ccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcC
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIE-------DPFD--------KEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLI 375 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iE-------dP~~--------~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~ 375 (479)
.++.++++++. +.++++++.||+ .+++ ...++..+++++.+ +||++.... ++++++++.++.
T Consensus 224 g~~~~~~~~~a-~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~~a~~~l~~ 301 (671)
T 1ps9_A 224 GGTFAETVELA-QAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRI-NDPQVADDILSR 301 (671)
T ss_dssp CCCHHHHHHHH-HHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSC-CSHHHHHHHHHT
T ss_pred CCCHHHHHHHH-HHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCC-CCHHHHHHHHHc
Confidence 56788888764 557889999995 3333 12356667888888 998877754 459999999999
Q ss_pred CCCcee
Q 011677 376 PLAMLF 381 (479)
Q Consensus 376 ~a~d~v 381 (479)
+.+|.|
T Consensus 302 g~aD~V 307 (671)
T 1ps9_A 302 GDADMV 307 (671)
T ss_dssp TSCSEE
T ss_pred CCCCEE
Confidence 999988
No 134
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=82.18 E-value=1 Score=41.86 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCcc-CHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKE-DWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI 391 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~-D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~ 391 (479)
++++++.+.. .+-+-++.+||=+++-. -.+..++|++++ -.++|-... .++++++.+++.++ +++. .+..
T Consensus 23 ~~~~a~~~a~-al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTV-lt~~~a~~ai~AGA-~fiv-----sP~~ 94 (217)
T 3lab_A 23 DLVHAIPMAK-ALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTV-CTADDFQKAIDAGA-QFIV-----SPGL 94 (217)
T ss_dssp CGGGHHHHHH-HHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECC-CSHHHHHHHHHHTC-SEEE-----ESSC
T ss_pred CHHHHHHHHH-HHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccc-cCHHHHHHHHHcCC-CEEE-----eCCC
Confidence 5667776644 46678999999999754 457778888887 444555533 46999999998884 5551 2221
Q ss_pred cccccHHHHHHHHHHHhhCCC------eEEEecCCCCCchhHHHHhHhhcCCCCccc
Q 011677 392 NQIGTVTEAIEVVKLANDVPW------GVVISHRSGETEDSFIADLSVGLASGQIKA 442 (479)
Q Consensus 392 ~~~Ggitea~~i~~~A~~~g~------~~~v~h~~get~d~~~~dlAv~~~~~~ik~ 442 (479)
.-++++.|+++|+ +++.|..+. .. +--|...|+.++|+
T Consensus 95 --------~~evi~~~~~~~v~~~~~~~~~PG~~Tp---tE--~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 95 --------TPELIEKAKQVKLDGQWQGVFLPGVATA---SE--VMIAAQAGITQLKC 138 (217)
T ss_dssp --------CHHHHHHHHHHHHHCSCCCEEEEEECSH---HH--HHHHHHTTCCEEEE
T ss_pred --------cHHHHHHHHHcCCCccCCCeEeCCCCCH---HH--HHHHHHcCCCEEEE
Confidence 2256777888888 887777542 11 23345567777774
No 135
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=81.20 E-value=3 Score=41.69 Aligned_cols=67 Identities=13% Similarity=-0.040 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHhhCCceeeecCC-----------C-ccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCc
Q 011677 313 KSGEDMIEMYKELCADYPIVSIEDPF-----------D-KEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAM 379 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iEdP~-----------~-~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d 379 (479)
++.++.+++ .+.+++.++.||+-.- . ..+++..+++++.+ +||++.... ++++++++.++.+.+|
T Consensus 243 ~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI-~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 243 QTLEESIEL-ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGF-GTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHH-HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSST-TSHHHHHHHHHTTSCS
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCC-CCHHHHHHHHHCCCcc
Confidence 567788876 4567889999888331 1 23567778888888 998877654 4699999999999999
Q ss_pred ee
Q 011677 380 LF 381 (479)
Q Consensus 380 ~v 381 (479)
.|
T Consensus 321 ~V 322 (363)
T 3l5l_A 321 LV 322 (363)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 136
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=80.74 E-value=17 Score=36.12 Aligned_cols=91 Identities=12% Similarity=0.142 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccc
Q 011677 316 EDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIG 395 (479)
Q Consensus 316 ~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~G 395 (479)
++-.+.+++.+++++|.++=+|+++.+.+-..++ -...+|.+-+. +|..-++.+-. .---| ++|-+..+
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~-vd~lkIgAr~~--~n~~LL~~va~--~~kPV------ilk~G~~~ 224 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQIGARNA--QNFRLLSKAGS--YNKPV------LLKRGFMN 224 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEEECGGGT--TCHHHHHHHHT--TCSCE------EEECCTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh-CCEEEECcccc--cCHHHHHHHHc--cCCcE------EEcCCCCC
Confidence 4556677888999999999999999999888887 22266666663 45666666653 34677 89999999
Q ss_pred cHHHHHHHHHHHhhCCC-eEEEe
Q 011677 396 TVTEAIEVVKLANDVPW-GVVIS 417 (479)
Q Consensus 396 gitea~~i~~~A~~~g~-~~~v~ 417 (479)
++.|+..++..+++.|- .+++-
T Consensus 225 tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 225 TIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCeEEEE
Confidence 99999999999988875 66664
No 137
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=78.09 E-value=10 Score=38.13 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcccccc
Q 011677 317 DMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGT 396 (479)
Q Consensus 317 e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Gg 396 (479)
+-.+.+.+.+++++|.++=+|+++++.+-..++. ..++|.+.+. +|..-++.+-.. --.| ++|-+..++
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~v-d~lkIgs~~~--~n~~LL~~~a~~--gkPV------ilk~G~~~t 261 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADIEVALDYV-DVIQIGARNM--QNFELLKAAGRV--DKPI------LLKRGLSAT 261 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTC-SEEEECGGGT--TCHHHHHHHHTS--SSCE------EEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhC-CEEEECcccc--cCHHHHHHHHcc--CCcE------EEecCCCCC
Confidence 4445667888999999999999999987776651 1166666663 455555554332 3567 889999999
Q ss_pred HHHHHHHHHHHhhCCC-eEEEecC
Q 011677 397 VTEAIEVVKLANDVPW-GVVISHR 419 (479)
Q Consensus 397 itea~~i~~~A~~~g~-~~~v~h~ 419 (479)
+.|+..++...++.|- ++++-|+
T Consensus 262 ~~e~~~Ave~i~~~Gn~~i~L~~r 285 (385)
T 3nvt_A 262 IEEFIGAAEYIMSQGNGKIILCER 285 (385)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9999999999988775 5777776
No 138
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=76.20 E-value=3.9 Score=41.20 Aligned_cols=103 Identities=19% Similarity=0.150 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhhCC--ceeeecCCCccCHHHHHHHHhh-----h-hhhhcCCccccCHHHHHHHhc--CCCCceeccc
Q 011677 315 GEDMIEMYKELCADYP--IVSIEDPFDKEDWEHTKSVLQI-----C-QQVVGDDLLMSNPKRIERATL--IPLAMLFFSR 384 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~--i~~iEdP~~~~D~~g~~~L~~~-----~-~~I~gde~~~t~~~~~~~~i~--~~a~d~v~~~ 384 (479)
.+..++-..+| .+.+ |+-+-=| +.++-+.+.+++++ + +|+++|=.| +.+.+...++ ..++|.+
T Consensus 37 v~aTv~QI~~L-~~aG~eiVRvaVp-~~~~A~al~~I~~~l~~~~~~vPLVADiHF--~~~~al~a~~~~a~~~dki--- 109 (406)
T 4g9p_A 37 VEATTAQVLEL-HRAGSEIVRLTVN-DEEAAKAVPEIKRRLLAEGVEVPLVGDFHF--NGHLLLRKYPKMAEALDKF--- 109 (406)
T ss_dssp HHHHHHHHHHH-HHHTCSEEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECCS--SHHHHHHHCHHHHHHCSEE---
T ss_pred HHHHHHHHHHH-HHcCCCEEEEecC-CHHHHHhHHHHHHHHHhcCCCCceEeeecc--cHHHHHHHHHHHHhHHhhc---
Confidence 33333333443 4434 7777766 56778899999887 4 999999764 4554443222 2357999
Q ss_pred CCCCcCcccccc----HHHHHHHHHHHhhCCCeEEEecCCCCCchhH
Q 011677 385 YPSNLWINQIGT----VTEAIEVVKLANDVPWGVVISHRSGETEDSF 427 (479)
Q Consensus 385 ~~~~ik~~~~Gg----itea~~i~~~A~~~g~~~~v~h~~get~d~~ 427 (479)
.|.|+.+|. -....++++.|+++|+++-+|-++|.-+...
T Consensus 110 ---RINPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~l 153 (406)
T 4g9p_A 110 ---RINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPAL 153 (406)
T ss_dssp ---EECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHH
T ss_pred ---ccCccccCccccHHHHHHHHHHHHHHccCCceeccccccccHHH
Confidence 999999994 3456788999999999999999888765443
No 139
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=75.68 E-value=3.1 Score=38.93 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCcc-CHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKE-DWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI 391 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~-D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~ 391 (479)
+++++.+.... +-+-++.+||=++... -.+..+++++++ -.++|-... .+.++++.+++.+ ++++ .. +
T Consensus 44 ~~~~a~~~a~a-l~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV-lt~~~a~~Ai~AG-A~fI------vs-P 113 (232)
T 4e38_A 44 NAEDIIPLGKV-LAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI-LNGEQALAAKEAG-ATFV------VS-P 113 (232)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECC-CSHHHHHHHHHHT-CSEE------EC-S
T ss_pred CHHHHHHHHHH-HHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc-CCHHHHHHHHHcC-CCEE------Ee-C
Confidence 45566665444 5678999999888644 456777788876 333443333 4599999999887 5666 21 1
Q ss_pred cccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCccc
Q 011677 392 NQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKA 442 (479)
Q Consensus 392 ~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~ 442 (479)
+. ..++++.|+++|++++.|..+ ... +.-|...|+.++|+
T Consensus 114 ----~~--~~~vi~~~~~~gi~~ipGv~T---ptE--i~~A~~~Gad~vK~ 153 (232)
T 4e38_A 114 ----GF--NPNTVRACQEIGIDIVPGVNN---PST--VEAALEMGLTTLKF 153 (232)
T ss_dssp ----SC--CHHHHHHHHHHTCEEECEECS---HHH--HHHHHHTTCCEEEE
T ss_pred ----CC--CHHHHHHHHHcCCCEEcCCCC---HHH--HHHHHHcCCCEEEE
Confidence 11 235677788899998887653 111 33455667888875
No 140
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=75.40 E-value=7.5 Score=36.75 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHhhCCceee-ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC
Q 011677 313 KSGEDMIEMYKELCADYPIVSI-EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW 390 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~i-EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik 390 (479)
+++.+++..|.+. ...|.-+ |.++-...++.++.+++.+ +||.--| +.+.+.++.++-.. .+|+| .+.
T Consensus 61 ~~~~~iA~~y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKD-fi~~~~qi~ea~~~-GAD~i------lLi 130 (251)
T 1i4n_A 61 ASLEDFIRMYDEL--ADAISILTEKHYFKGDPAFVRAARNLTCRPILAKD-FYIDTVQVKLASSV-GADAI------LII 130 (251)
T ss_dssp CCHHHHHHHHHHH--CSEEEEECCCSSSCCCTHHHHHHHTTCCSCEEEEC-CCCSTHHHHHHHHT-TCSEE------EEE
T ss_pred CCHHHHHHHHHHh--CCceEEEecccccCCCHHHHHHHHHhCCCCEEEee-CCCCHHHHHHHHHc-CCCEE------EEe
Confidence 4788888888764 6677665 5556678889999999999 9988777 45667778875444 48998 887
Q ss_pred ccccccHHHHHHHHHHHhhCCCeEEEecC
Q 011677 391 INQIGTVTEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 391 ~~~~Ggitea~~i~~~A~~~g~~~~v~h~ 419 (479)
..... -.+..+..+.|++.|+.+++-..
T Consensus 131 ~a~l~-~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 131 ARILT-AEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp GGGSC-HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCC-HHHHHHHHHHHHHcCCeEEEEeC
Confidence 77433 35677888899999999988643
No 141
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=75.25 E-value=5 Score=39.87 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcc
Q 011677 313 KSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWIN 392 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~ 392 (479)
++.+++. .+.+.+++++|.|+=+||+.++.+-..++.-.+.+|...|. +|..-++..-..+ --| +++.+
T Consensus 88 l~~e~~~-~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~--~n~~LL~~va~~g--kPv------iLstG 156 (349)
T 2wqp_A 88 LNEEDEI-KLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGEC--NNYPLIKLVASFG--KPI------ILSTG 156 (349)
T ss_dssp CCHHHHH-HHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGT--TCHHHHHHHHTTC--SCE------EEECT
T ss_pred CCHHHHH-HHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccc--cCHHHHHHHHhcC--CeE------EEECC
Confidence 4445444 56778999999999999998888777765322256666664 4566666654432 335 56666
Q ss_pred ccccHHHHHHHHHHHhhCCCeEEEec
Q 011677 393 QIGTVTEAIEVVKLANDVPWGVVISH 418 (479)
Q Consensus 393 ~~Ggitea~~i~~~A~~~g~~~~v~h 418 (479)
-. |+.|+..++++.++.|-.+++-|
T Consensus 157 ma-t~~Ei~~Ave~i~~~G~~iiLlh 181 (349)
T 2wqp_A 157 MN-SIESIKKSVEIIREAGVPYALLH 181 (349)
T ss_dssp TC-CHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CC-CHHHHHHHHHHHHHcCCCEEEEe
Confidence 54 77777777777766665555544
No 142
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=73.51 E-value=3.6 Score=41.16 Aligned_cols=66 Identities=12% Similarity=0.012 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHhhCCceeeecCCC------ccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 313 KSGEDMIEMYKELCADYPIVSIEDPFD------KEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iEdP~~------~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
++.++.+++ .+.++++++.||+-+-. ..+++..+++++.+ +||++...+ +++++.++++.+.+|.|
T Consensus 248 ~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi--t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 248 NEEADALYL-IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY--TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp THHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHH-HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc--CHHHHHHHHHCCCccEE
Confidence 356677765 45688999999997652 34567678899988 997766655 49999999999999999
No 143
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=73.10 E-value=2.8 Score=42.21 Aligned_cols=66 Identities=2% Similarity=-0.222 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCCc-----cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFDK-----EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~~-----~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.++++++ .+.++++++.||+.+... ...+ .+++++.+ +||++...+ +++++.+.++.+.+|+|
T Consensus 262 ~~~~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~i--t~~~a~~~l~~g~aD~V 333 (379)
T 3aty_A 262 SNPEALTKHL-CKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRY--DFEEADQQIREGKVDAV 333 (379)
T ss_dssp SCHHHHHHHH-HHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHH-HHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCC--CHHHHHHHHHcCCCeEE
Confidence 4566777766 456899999999987521 1125 78899998 998877765 49999999999999999
No 144
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=72.62 E-value=11 Score=36.11 Aligned_cols=93 Identities=12% Similarity=0.021 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccc
Q 011677 316 EDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIG 395 (479)
Q Consensus 316 ~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~G 395 (479)
++-.+.+.+.+++++|.++=+|+++++.+-..++ -...+|.+-+. +|..-++.+-.. ---| ++|.+..+
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~kIgs~~~--~n~~ll~~~a~~--~kPV------~lk~G~~~ 156 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQIGARNM--QNFPLLREVGRS--GKPV------LLKRGFGN 156 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEEECGGGT--TCHHHHHHHHHH--TCCE------EEECCTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEEECcccc--cCHHHHHHHHcc--CCeE------EEcCCCCC
Confidence 4555677888999999999999999998888887 22266666663 455556555432 3567 88999999
Q ss_pred cHHHHHHHHHHHhhCCC-eEEEecC
Q 011677 396 TVTEAIEVVKLANDVPW-GVVISHR 419 (479)
Q Consensus 396 gitea~~i~~~A~~~g~-~~~v~h~ 419 (479)
++.|+..+++.+++.|- .+++-||
T Consensus 157 t~~ei~~Ave~i~~~Gn~~i~L~~R 181 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGNWQVVLVER 181 (276)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999999999988875 7788774
No 145
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=71.58 E-value=3.4 Score=43.42 Aligned_cols=113 Identities=16% Similarity=0.172 Sum_probs=72.1
Q ss_pred HHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccC---CCCcCccc------cccHHHHHHHHHHHhhCCC
Q 011677 344 EHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRY---PSNLWINQ------IGTVTEAIEVVKLANDVPW 412 (479)
Q Consensus 344 ~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~---~~~ik~~~------~Ggitea~~i~~~A~~~g~ 412 (479)
+..+++++.. ++|+++.. +| .+.++.+++.+ +|+| ++ |+-+-.++ +.-+|..+++++.|+.+|+
T Consensus 311 ~~i~~ik~~~p~~~viaGNV-aT-~e~a~~Li~aG-AD~v--kVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~v 385 (556)
T 4af0_A 311 EFIKWIKQTYPKIDVIAGNV-VT-REQAAQLIAAG-ADGL--RIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGI 385 (556)
T ss_dssp HHHHHHHHHCTTSEEEEEEE-CS-HHHHHHHHHHT-CSEE--EECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHhhCCcceEEeccc-cC-HHHHHHHHHcC-CCEE--eecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCC
Confidence 4455566665 77888874 34 88899988877 6777 11 22222222 3458999999999999999
Q ss_pred eEEEecCCCCCchhHHHHhHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccc
Q 011677 413 GVVISHRSGETEDSFIADLSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDY 475 (479)
Q Consensus 413 ~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~ 475 (479)
+++.-....-+.| .-.|+|.|+.++-.|++..+- +|..|+--.|.|+.|
T Consensus 386 pvIADGGI~~sGD---i~KAlaaGAd~VMlGsllAGt-----------~EsPGe~~~~~G~~~ 434 (556)
T 4af0_A 386 PCIADGGIGNIGH---IAKALALGASAVMMGGLLAGT-----------TESPGEYFYHEGKRV 434 (556)
T ss_dssp CEEEESCCCSHHH---HHHHHHTTCSEEEESTTTTTB-----------TTSSSCCEEETTEEE
T ss_pred CEEecCCcCcchH---HHHHhhcCCCEEEEchhhccc-----------cCCCCcEEEECCEEE
Confidence 9865443322222 235667789999999885432 444555444555544
No 146
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=71.24 E-value=14 Score=35.30 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHhhCC---ceee-ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCC
Q 011677 313 KSGEDMIEMYKELCADYP---IVSI-EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPS 387 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~---i~~i-EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~ 387 (479)
+++.+++..| ++.+ |.-+ |+++-....+.++.+++.+ +||.-.+ +..++.++..+...+ +|+|
T Consensus 79 ~dp~~~A~~y----~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kd-fi~d~~qi~ea~~~G-AD~V------ 146 (272)
T 3tsm_A 79 FDPPALAKAY----EEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKD-FLFDPYQVYEARSWG-ADCI------ 146 (272)
T ss_dssp CCHHHHHHHH----HHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEES-CCCSTHHHHHHHHTT-CSEE------
T ss_pred CCHHHHHHHH----HHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECC-ccCCHHHHHHHHHcC-CCEE------
Confidence 4677776554 3444 3333 5566668889999999999 9976555 345688888877665 6777
Q ss_pred CcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCc
Q 011677 388 NLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQI 440 (479)
Q Consensus 388 ~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~i 440 (479)
.+...-.. -.++.+..+.|+..|+.+++..... .. ++-|..+++..|
T Consensus 147 lLi~a~L~-~~~l~~l~~~a~~lGl~~lvevh~~---eE--l~~A~~~ga~iI 193 (272)
T 3tsm_A 147 LIIMASVD-DDLAKELEDTAFALGMDALIEVHDE---AE--MERALKLSSRLL 193 (272)
T ss_dssp EEETTTSC-HHHHHHHHHHHHHTTCEEEEEECSH---HH--HHHHTTSCCSEE
T ss_pred EEcccccC-HHHHHHHHHHHHHcCCeEEEEeCCH---HH--HHHHHhcCCCEE
Confidence 66665443 4677788889999999988754321 11 344555555555
No 147
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=69.92 E-value=7.6 Score=38.14 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=85.3
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCC---ccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcC---CCCcee--
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFD---KEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLI---PLAMLF-- 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~---~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~---~a~d~v-- 381 (479)
.++.++.+++. +.|.+.++..||=-++ +.|++..+++++.. +.+++= ...+.++++..++. ..++.|
T Consensus 24 ~~~~~~Kl~ia-~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l--~r~~~~~i~~a~~al~~ag~~~v~i 100 (325)
T 3eeg_A 24 QLNTEEKIIVA-KALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICAL--TRAKEADINIAGEALRFAKRSRIHT 100 (325)
T ss_dssp -CCTTHHHHHH-HHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEE--CCSCHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEe--ecCCHHHHHHHHHhhcccCCCEEEE
Confidence 56888999876 4578899999998554 55777777777654 332211 12356777765543 123333
Q ss_pred -cccC----CCCcCccccccHHHHHHHHHHHhhCCCeEEEecC-CCCCchhHHHHh---HhhcCCCCcccCCCCchhHHH
Q 011677 382 -FSRY----PSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR-SGETEDSFIADL---SVGLASGQIKAGAPCRGERLA 452 (479)
Q Consensus 382 -~~~~----~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~-~get~d~~~~dl---Av~~~~~~ik~G~~~~~er~~ 452 (479)
.|-+ -.+++.+.--.+..+.+++++|+++|..+.+++. .+.++..+.+++ +...|+..|.+.+..+.-.=.
T Consensus 101 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~ 180 (325)
T 3eeg_A 101 GIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPW 180 (325)
T ss_dssp EEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHH
T ss_pred EecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHH
Confidence 1111 2244555566677778899999999999888764 233555555444 455688888766654443333
Q ss_pred HhHHHH
Q 011677 453 KYNQLL 458 (479)
Q Consensus 453 kyn~ll 458 (479)
.+-+++
T Consensus 181 ~v~~lv 186 (325)
T 3eeg_A 181 QYGERI 186 (325)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344443
No 148
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=68.69 E-value=22 Score=36.19 Aligned_cols=130 Identities=8% Similarity=0.025 Sum_probs=76.7
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCC---ccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCcee---c
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFD---KEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLF---F 382 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~---~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v---~ 382 (479)
..++.+|-++++ +.|++.++..||=-++ +.|++..+.+.+.. ..+++- ...+.++++.+++.+. +.| .
T Consensus 56 ~~~s~eeKl~Ia-~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~~~~~~v~~~--~r~~~~di~~A~~aG~-~~V~i~~ 131 (423)
T 3ivs_A 56 AFFDTEKKIQIA-KALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTH--IRCHMDDARVAVETGV-DGVDVVI 131 (423)
T ss_dssp CCCCHHHHHHHH-HHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEE--EESCHHHHHHHHHTTC-SEEEEEE
T ss_pred CCcCHHHHHHHH-HHHHHcCCCEEEEeecccCHHHHHHHHHHHhcCCCCEEEEe--eccChhhHHHHHHcCC-CEEEEEe
Confidence 367999999876 5589999999998776 45566666666543 333321 1235788888877653 333 2
Q ss_pred ccCCCC----cCccccccHHHHHHHHHHHhhCCCeEEEecCC-CCCchhHHH---HhHhhcCCCCcccCC
Q 011677 383 SRYPSN----LWINQIGTVTEAIEVVKLANDVPWGVVISHRS-GETEDSFIA---DLSVGLASGQIKAGA 444 (479)
Q Consensus 383 ~~~~~~----ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~-get~d~~~~---dlAv~~~~~~ik~G~ 444 (479)
+-++.. ++-++-..+..+.+++++|+++|+.+.++... ..++..+++ ..+...|+..|.+.+
T Consensus 132 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~D 201 (423)
T 3ivs_A 132 GTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIAD 201 (423)
T ss_dssp EC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred eccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCC
Confidence 222222 22233344667778899999999998765421 113334444 345566777775443
No 149
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=68.51 E-value=13 Score=37.07 Aligned_cols=144 Identities=16% Similarity=0.154 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCC---ccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhc--C-CCCcee--
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFD---KEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATL--I-PLAMLF-- 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~---~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~--~-~a~d~v-- 381 (479)
.++.+|.+++. +.|++.++..||=-++ +.|++..+++.+.. +.+++= ...+.+++...++ . -.++.|
T Consensus 30 ~~~~~~Kl~ia-~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l--~r~~~~di~~a~~al~~ag~~~v~i 106 (370)
T 3rmj_A 30 AMTKEEKIRVA-RQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSL--SRAIERDIRQAGEAVAPAPKKRIHT 106 (370)
T ss_dssp CCCHHHHHHHH-HHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEE--EESSHHHHHHHHHHHTTSSSEEEEE
T ss_pred CcCHHHHHHHH-HHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEE--ecCCHHHHHHHHHHHhhCCCCEEEE
Confidence 57999999876 5578999999998554 56667776666654 333211 1135778877665 1 123333
Q ss_pred -cccCC----CCcCccccccHHHHHHHHHHHhhCCCeEEEecC-CCCCchhHHHHh---HhhcCCCCcccCCCCchhHHH
Q 011677 382 -FSRYP----SNLWINQIGTVTEAIEVVKLANDVPWGVVISHR-SGETEDSFIADL---SVGLASGQIKAGAPCRGERLA 452 (479)
Q Consensus 382 -~~~~~----~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~-~get~d~~~~dl---Av~~~~~~ik~G~~~~~er~~ 452 (479)
.+-++ .+++.+.-..+..+.+++++|+++|..+.+++. .+.++..+++++ +...|+..|.+.+..+.--=.
T Consensus 107 f~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~ 186 (370)
T 3rmj_A 107 FIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPY 186 (370)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHH
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHH
Confidence 12211 133333344455566678899999999877764 234555555544 455688888755544333323
Q ss_pred HhHHHH
Q 011677 453 KYNQLL 458 (479)
Q Consensus 453 kyn~ll 458 (479)
.+-+++
T Consensus 187 ~~~~lv 192 (370)
T 3rmj_A 187 KTEEFF 192 (370)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333443
No 150
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=68.50 E-value=10 Score=37.56 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQ 393 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~ 393 (479)
+.++. +.+.+.+++.+|.|+=.||+.++.+-+.++.-.+.+|...|. +|..-++..-..+ --| +++.+-
T Consensus 76 ~~e~~-~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~--~N~pLL~~va~~g--KPv------iLstGm 144 (350)
T 3g8r_A 76 QPEQM-QKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSF--TDWPLLERIARSD--KPV------VASTAG 144 (350)
T ss_dssp CHHHH-HHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSST--TCHHHHHHHHTSC--SCE------EEECTT
T ss_pred CHHHH-HHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccc--cCHHHHHHHHhhC--CcE------EEECCC
Confidence 44444 456778999999999999988887776665221145555553 4455555443322 233 344443
Q ss_pred cccHHHHHHHHHHHhhCCCeEEE
Q 011677 394 IGTVTEAIEVVKLANDVPWGVVI 416 (479)
Q Consensus 394 ~Ggitea~~i~~~A~~~g~~~~v 416 (479)
.|+.|+..++++..+.|-++++
T Consensus 145 -stl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 145 -ARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp -CCHHHHHHHHHHHHTTTCCEEE
T ss_pred -CCHHHHHHHHHHHHHcCCCEEE
Confidence 2555555555555444444433
No 151
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=67.68 E-value=18 Score=34.45 Aligned_cols=96 Identities=13% Similarity=0.010 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQ 393 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~ 393 (479)
..++-++.+.+.++++++-++=+|+++.+.+-..++..- ++|.+-+. +|..-++.+- +.--.| ++|-++
T Consensus 59 g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~vd~-~~IgA~~~--rn~~ll~~~a--~~~~PV------~lK~G~ 127 (267)
T 2nwr_A 59 GLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADI-IQIPAFLC--RQTDLLLAAA--KTGRAV------NVKKGQ 127 (267)
T ss_dssp CHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTTCSE-EEECGGGT--TCHHHHHHHH--TTTSEE------EEECCT
T ss_pred cHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhcCCE-EEECcccc--cCHHHHHHHH--cCCCcE------EEeCCC
Confidence 356777778888899999999999999887766653211 55555553 3455555542 446678 899999
Q ss_pred cccHHHHHHHHHHHhhCCC-eEEEecCC
Q 011677 394 IGTVTEAIEVVKLANDVPW-GVVISHRS 420 (479)
Q Consensus 394 ~Ggitea~~i~~~A~~~g~-~~~v~h~~ 420 (479)
.|++.+++.++...+..|- .+++-|+-
T Consensus 128 ~~t~~e~~~Av~~i~~~GN~~i~L~~rG 155 (267)
T 2nwr_A 128 FLAPWDTKNVVEKLKFGGAKEIYLTERG 155 (267)
T ss_dssp TCCGGGGHHHHHHHHHTTCSSEEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999999999999888774 67777763
No 152
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=67.45 E-value=15 Score=35.44 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQ 393 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~ 393 (479)
--++-++++++.+++++|.++=+|+++++.+-..++.. .++|.+-+. +|..-++.+-.. ---| ++|-+.
T Consensus 75 g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~vd-~lqIgA~~~--~n~~LLr~va~~--gkPV------ilK~G~ 143 (285)
T 3sz8_A 75 GLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEIAD-VLQVPAFLA--RQTDLVVAIAKA--GKPV------NVKKPQ 143 (285)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTTCS-EEEECGGGT--TCHHHHHHHHHT--SSCE------EEECCT
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC-EEEECcccc--CCHHHHHHHHcc--CCcE------EEeCCC
Confidence 34677778888889999999999999998876665511 144445442 334444443322 2344 555555
Q ss_pred cccHHHHHHHHHHHhhCCC-eEEEec
Q 011677 394 IGTVTEAIEVVKLANDVPW-GVVISH 418 (479)
Q Consensus 394 ~Ggitea~~i~~~A~~~g~-~~~v~h 418 (479)
..++.|+..+++.+++.|- ++++-|
T Consensus 144 ~~t~~ei~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 144 FMSPTQLKHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp TSCGGGTHHHHHHHHHTTCCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEe
Confidence 5555566666655554432 344444
No 153
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=65.44 E-value=7.9 Score=38.97 Aligned_cols=94 Identities=7% Similarity=0.088 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcc
Q 011677 313 KSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWIN 392 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~ 392 (479)
++.+++. .+.+.+++++|.|+=.||+.++.+-+.++.-.+.+|...|. +|..-++..-..+ --| +++.+
T Consensus 98 l~~e~~~-~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~--~N~pLL~~va~~g--KPV------iLStG 166 (385)
T 1vli_A 98 MPAEWIL-PLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEI--NHLPLLKYVARLN--RPM------IFSTA 166 (385)
T ss_dssp SCGGGHH-HHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGT--TCHHHHHHHHTTC--SCE------EEECT
T ss_pred CCHHHHH-HHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccc--cCHHHHHHHHhcC--CeE------EEECC
Confidence 3444444 45677899999999999988887766655222255666664 4566666554432 344 55666
Q ss_pred ccccHHHHHHHHHHHhhCCC-eEEEec
Q 011677 393 QIGTVTEAIEVVKLANDVPW-GVVISH 418 (479)
Q Consensus 393 ~~Ggitea~~i~~~A~~~g~-~~~v~h 418 (479)
-. |+.|+..+++++++.|. .+++-|
T Consensus 167 ma-Tl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 167 GA-EISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp TC-CHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CC-CHHHHHHHHHHHHHCCCCcEEEEe
Confidence 54 77777777777776664 555444
No 154
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=63.48 E-value=16 Score=36.01 Aligned_cols=125 Identities=12% Similarity=-0.008 Sum_probs=79.7
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeec------CC--------CccCHHHHHHHHhhh--hhhh--cCCccccCHHHHHHH
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIED------PF--------DKEDWEHTKSVLQIC--QQVV--GDDLLMSNPKRIERA 372 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEd------P~--------~~~D~~g~~~L~~~~--~~I~--gde~~~t~~~~~~~~ 372 (479)
..++.++.++++. .+.+.++..||= |+ .+++++-.+++++.. ++++ +.- ...+.++++++
T Consensus 25 ~~~~~e~k~~i~~-~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p-~~~~~~~i~~a 102 (345)
T 1nvm_A 25 HQYTLDDVRAIAR-ALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLP-GIGSVHDLKNA 102 (345)
T ss_dssp TCCCHHHHHHHHH-HHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECB-TTBCHHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecC-CcccHHHHHHH
Confidence 3678999998765 468899999998 33 256788888888765 4433 211 12247778887
Q ss_pred hcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEec-CCCCCchhHH---HHhHhhcCCCCcccCCC
Q 011677 373 TLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISH-RSGETEDSFI---ADLSVGLASGQIKAGAP 445 (479)
Q Consensus 373 i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h-~~get~d~~~---~dlAv~~~~~~ik~G~~ 445 (479)
.+.+ +|.+ .+-. .+.-+-++.++++.|+++|+.+...- ....++..++ +..+.+.|+..+.+.+.
T Consensus 103 ~~aG-vd~v------~I~~-~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT 171 (345)
T 1nvm_A 103 YQAG-ARVV------RVAT-HCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADS 171 (345)
T ss_dssp HHHT-CCEE------EEEE-ETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECT
T ss_pred HhCC-cCEE------EEEE-eccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 7764 5666 4432 11112467788889999999987654 2344555444 44556667777754443
No 155
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=63.34 E-value=13 Score=36.02 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQ 393 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~ 393 (479)
--++-++++++.+++++|.++=+|+++++.+-..++ -..++|.+-+. +|..-++.+-. .---| ++|-+.
T Consensus 96 g~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~--~n~~LLr~va~--~gkPV------ilK~Gm 164 (298)
T 3fs2_A 96 GLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLC--RQTDLLIAAAR--TGRVV------NVKKGQ 164 (298)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGT--TCHHHHHHHHH--TTSEE------EEECCT
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECcccc--CCHHHHHHHHc--cCCcE------EEeCCC
Confidence 346677788888899999999999988776655554 11155666553 45555555433 34467 788887
Q ss_pred cccHHHHHHHHHHHhhCCC-eEEEecC
Q 011677 394 IGTVTEAIEVVKLANDVPW-GVVISHR 419 (479)
Q Consensus 394 ~Ggitea~~i~~~A~~~g~-~~~v~h~ 419 (479)
..++.|+..+++.+.+.|- ++++-|+
T Consensus 165 s~t~~ei~~ave~i~~~Gn~~iiL~er 191 (298)
T 3fs2_A 165 FLAPWDMKNVLAKITESGNPNVLATER 191 (298)
T ss_dssp TCCGGGHHHHHHHHHTTTCCCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 7788888888888877654 4666665
No 156
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=63.08 E-value=16 Score=35.01 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcccc
Q 011677 315 GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQI 394 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~ 394 (479)
.++-.+.+.+.++++++-++=+|+++.+.+-..++ -..+.|.+-+. +|..-++.+- +.--.| ++|.+..
T Consensus 71 l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-~d~~kIga~~~--~n~~ll~~~a--~~~kPV------~lk~G~~ 139 (280)
T 2qkf_A 71 LEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV-CDVIQLPAFLA--RQTDLVVAMA--KTGNVV------NIKKPQF 139 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGT--TBHHHHHHHH--HTCCEE------EEECCTT
T ss_pred hHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-CCEEEECcccc--cCHHHHHHHH--cCCCcE------EEECCCC
Confidence 45666677888899999999999999999888887 22255656553 3455555553 345678 8999999
Q ss_pred ccHHHHHHHHHHHhhCCC-eEEEecCC
Q 011677 395 GTVTEAIEVVKLANDVPW-GVVISHRS 420 (479)
Q Consensus 395 Ggitea~~i~~~A~~~g~-~~~v~h~~ 420 (479)
|++.|++.++...+..|- .+++-|+.
T Consensus 140 ~t~~e~~~A~~~i~~~Gn~~i~L~~rg 166 (280)
T 2qkf_A 140 LSPSQMKNIVEKFHEAGNGKLILCERG 166 (280)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 999999999999988875 67777754
No 157
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.66 E-value=13 Score=36.75 Aligned_cols=68 Identities=7% Similarity=-0.064 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecC----------CC-ccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCc
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDP----------FD-KEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAM 379 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP----------~~-~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d 379 (479)
.++.++.+++ .+.+++.++.+|+=- .. ..+++-.+++++.+ +||++.-.. +++++++++++.+.+|
T Consensus 225 g~~~~~~~~l-a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI-~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 225 GLTAKDYVPY-AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLI-TSGWQAEEILQNGRAD 302 (340)
T ss_dssp SCCGGGHHHH-HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSC-CCHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCC-CCHHHHHHHHHCCCee
Confidence 4566777765 455788888877631 11 22566678888888 887655433 4699999999999999
Q ss_pred ee
Q 011677 380 LF 381 (479)
Q Consensus 380 ~v 381 (479)
.|
T Consensus 303 ~V 304 (340)
T 3gr7_A 303 LV 304 (340)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 158
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=61.59 E-value=13 Score=35.90 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcccc
Q 011677 315 GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQI 394 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~ 394 (479)
-++-++.+++.+++++|.++=+|+++++.+-..++ -..++|.+-+. +|..-++.+-. .--.| ++|-++.
T Consensus 73 ~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~-vd~lkIgA~~~--~n~~LLr~~a~--~gkPV------ilK~G~~ 141 (288)
T 3tml_A 73 MDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV-VDVLQTPAFLC--RQTDFIHACAR--SGKPV------NIKKGQF 141 (288)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-CSEEEECGGGT--TCHHHHHHHHT--SSSCE------EEECCTT
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-CCEEEECcccc--cCHHHHHHHHc--cCCcE------EEeCCCC
Confidence 45667778888899999999999999998888776 22256666653 45565655433 34567 8888888
Q ss_pred ccHHHHHHHHHHHhhCCC-------eEEEecC
Q 011677 395 GTVTEAIEVVKLANDVPW-------GVVISHR 419 (479)
Q Consensus 395 Ggitea~~i~~~A~~~g~-------~~~v~h~ 419 (479)
.++.|+..+++.+.+.|- ++++-|+
T Consensus 142 ~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~er 173 (288)
T 3tml_A 142 LAPHDMKNVIDKARDAAREAGLSEDRFMACER 173 (288)
T ss_dssp CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeC
Confidence 889999999998877653 5777675
No 159
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=61.11 E-value=20 Score=34.51 Aligned_cols=129 Identities=16% Similarity=0.067 Sum_probs=73.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCC-------Cc-cCH-HHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCce
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPF-------DK-EDW-EHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAML 380 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~-------~~-~D~-~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~ 380 (479)
..++.++.++++. .+++.++.+||=-+ +. .|. +-++.+++.- +++.+- ..+.++++.+++.+ ++.
T Consensus 22 ~~~~~e~k~~i~~-~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l---~~~~~~i~~a~~ag-~~~ 96 (298)
T 2cw6_A 22 NIVSTPVKIKLID-MLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVL---TPNLKGFEAAVAAG-AKE 96 (298)
T ss_dssp SCCCHHHHHHHHH-HHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEE---CCSHHHHHHHHHTT-CSE
T ss_pred CCCCHHHHHHHHH-HHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEE---cCCHHhHHHHHHCC-CCE
Confidence 3578999998764 57899999999742 10 243 2333333321 333321 23588898888775 455
Q ss_pred e---cccCC----CCcCccccccHHHHHHHHHHHhhCCCeEEEecC-------CCCCchhHHHHh---HhhcCCCCcccC
Q 011677 381 F---FSRYP----SNLWINQIGTVTEAIEVVKLANDVPWGVVISHR-------SGETEDSFIADL---SVGLASGQIKAG 443 (479)
Q Consensus 381 v---~~~~~----~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~-------~get~d~~~~dl---Av~~~~~~ik~G 443 (479)
+ .+.++ .+++-+.-..+..+.+++++|+++|+.+.+.-+ .+.++..++.++ +...|+..+.+.
T Consensus 97 v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 97 VVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp EEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 5 11110 112223334456777888999999999753211 123444554444 466788777544
Q ss_pred C
Q 011677 444 A 444 (479)
Q Consensus 444 ~ 444 (479)
+
T Consensus 177 D 177 (298)
T 2cw6_A 177 D 177 (298)
T ss_dssp E
T ss_pred C
Confidence 3
No 160
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=58.66 E-value=36 Score=32.92 Aligned_cols=131 Identities=15% Similarity=0.023 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCC--c------cCH-HHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCce
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFD--K------EDW-EHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAML 380 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~--~------~D~-~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~ 380 (479)
..++.++.++++. .+++.++.+||=-+. + .|. +-++.+++.- +.+.+ .+.+..+++.+++.+ ++.
T Consensus 23 ~~~~~e~k~~i~~-~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~---l~~~~~~i~~a~~~g-~~~ 97 (307)
T 1ydo_A 23 VWIATEDKITWIN-QLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAA---LVPNQRGLENALEGG-INE 97 (307)
T ss_dssp SCCCHHHHHHHHH-HHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEE---ECCSHHHHHHHHHHT-CSE
T ss_pred CCCCHHHHHHHHH-HHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEE---EeCCHHhHHHHHhCC-cCE
Confidence 3578999998764 578999999997421 1 233 2233332221 22221 113578888887765 444
Q ss_pred e---cccCC----CCcCccccccHHHHHHHHHHHhhCCCeEEE--ecC-----CCCCchhHHHHhH---hhcCCCCcccC
Q 011677 381 F---FSRYP----SNLWINQIGTVTEAIEVVKLANDVPWGVVI--SHR-----SGETEDSFIADLS---VGLASGQIKAG 443 (479)
Q Consensus 381 v---~~~~~----~~ik~~~~Ggitea~~i~~~A~~~g~~~~v--~h~-----~get~d~~~~dlA---v~~~~~~ik~G 443 (479)
| .+.++ .+++.+.-..+..+.+++++|+++|+.+.. +.. .+.++..++.+++ ...|+..+.+.
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 4 11111 133333333456678889999999999752 111 1235556666665 56688777654
Q ss_pred CCC
Q 011677 444 APC 446 (479)
Q Consensus 444 ~~~ 446 (479)
+..
T Consensus 178 DT~ 180 (307)
T 1ydo_A 178 DTI 180 (307)
T ss_dssp CSS
T ss_pred CCC
Confidence 433
No 161
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=57.63 E-value=42 Score=33.49 Aligned_cols=125 Identities=14% Similarity=0.074 Sum_probs=73.3
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCC---ccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCcee---c
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFD---KEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLF---F 382 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~---~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v---~ 382 (479)
..++.++.++++ +.+++.++.+||=-++ +.|++.++.+++.. .++++- ...++++++.+++.+ ++.+ .
T Consensus 20 ~~~~~~~k~~ia-~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~~~--~r~~~~di~~a~~~g-~~~v~i~~ 95 (382)
T 2ztj_A 20 ANFSTQDKVEIA-KALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTH--IQCRLDAAKVAVETG-VQGIDLLF 95 (382)
T ss_dssp CCCCHHHHHHHH-HHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEE--EESCHHHHHHHHHTT-CSEEEEEE
T ss_pred CCcCHHHHHHHH-HHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCcEEEEE--cccChhhHHHHHHcC-CCEEEEEe
Confidence 367899999876 4578899999999665 45667777776643 333321 112367788877664 4443 2
Q ss_pred ccCCCCcCcccccc----HHHHHHHHHHHhhCC--CeEEEecC-CCCCchhHHHHhH---hhcCCCCcc
Q 011677 383 SRYPSNLWINQIGT----VTEAIEVVKLANDVP--WGVVISHR-SGETEDSFIADLS---VGLASGQIK 441 (479)
Q Consensus 383 ~~~~~~ik~~~~Gg----itea~~i~~~A~~~g--~~~~v~h~-~get~d~~~~dlA---v~~~~~~ik 441 (479)
+.++...+ +.--+ +..+.+++++|+++| +.+.++-. ...++..++++++ ... +..+.
T Consensus 96 ~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~ 162 (382)
T 2ztj_A 96 GTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVG 162 (382)
T ss_dssp CC---------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEE
T ss_pred ccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEE
Confidence 22232333 22224 445778888999999 98877653 2234445554443 344 55554
No 162
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=57.55 E-value=20 Score=34.54 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcccc
Q 011677 315 GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQI 394 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~ 394 (479)
.++-++.+.+.+++++|-++=+|+++++.+-..++..- ..|.+-+. +|..-++.+- +.--.| ++|-+..
T Consensus 74 l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~vd~-~kIgA~~~--~n~~Ll~~~a--~~~kPV------~lk~G~~ 142 (292)
T 1o60_A 74 MEEGLKIFQELKDTFGVKIITDVHEIYQCQPVADVVDI-IQLPAFLA--RQTDLVEAMA--KTGAVI------NVKKPQF 142 (292)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSE-EEECGGGT--TCHHHHHHHH--HTTCEE------EEECCTT
T ss_pred HHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhcCCE-EEECcccc--cCHHHHHHHH--cCCCcE------EEeCCCC
Confidence 35666677888899999999999999987777653111 56666653 4456555554 345678 8899999
Q ss_pred ccHHHHHHHHHHHhhCCC-eEEEecC
Q 011677 395 GTVTEAIEVVKLANDVPW-GVVISHR 419 (479)
Q Consensus 395 Ggitea~~i~~~A~~~g~-~~~v~h~ 419 (479)
+++.|++.++...+..|- .+++-|+
T Consensus 143 ~t~~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 143 LSPSQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 999999999999888775 6777675
No 163
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=56.80 E-value=13 Score=38.25 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHhhCCceee-ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC
Q 011677 313 KSGEDMIEMYKELCADYPIVSI-EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW 390 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~i-EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik 390 (479)
+++.+++..|.+- .-.|.-+ |.++-...++.++.+++.+ +||.--| +.+.+.++.++-.. .+|+| .+.
T Consensus 68 ~~~~~iA~~y~~~--A~~IsvLTd~~~F~gs~~dL~~vr~~v~lPvLrKD-FI~d~~Qi~ea~~~-GAD~I------LLi 137 (452)
T 1pii_A 68 FDPARIAAIYKHY--ASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKD-FIIDPYQIYLARYY-QADAC------LLM 137 (452)
T ss_dssp CCHHHHHHHHTTT--CSEEEEECCSTTTCCCTTHHHHHHHHCCSCEEEES-CCCSHHHHHHHHHT-TCSEE------EEE
T ss_pred CCHHHHHHHHHhh--CcEEEEEecccccCCCHHHHHHHHHhcCCCeEEEe-ccCCHHHHHHHHHc-CCCEE------EEE
Confidence 4678887776542 3335443 6667778889999999999 9988777 55778888885444 58999 888
Q ss_pred ccccccHHHHHHHHHHHhhCCCeEEEecC
Q 011677 391 INQIGTVTEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 391 ~~~~Ggitea~~i~~~A~~~g~~~~v~h~ 419 (479)
..... -.+..+..+.|++.|+.+++-..
T Consensus 138 ~a~l~-~~~l~~l~~~a~~lgm~~LvEvh 165 (452)
T 1pii_A 138 LSVLD-DDQYRQLAAVAHSLEMGVLTEVS 165 (452)
T ss_dssp TTTCC-HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCC-HHHHHHHHHHHHHcCCeEEEEeC
Confidence 87655 35788888999999999988643
No 164
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=56.79 E-value=2.3 Score=43.22 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=0.0
Q ss_pred ccchhHHHHHHHHHhhhcCCCcHHHHHHHhhhcC
Q 011677 10 HMLSRKIEDAVNAAVRAKSPDPVLFISNHMRKAV 43 (479)
Q Consensus 10 ~~~~~~~~~~ln~~~~~~p~d~~~~l~~~~~~~~ 43 (479)
++++++|++..-+++.++|.|++.|.++||.++-
T Consensus 7 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 40 (416)
T 3tnp_B 7 AGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQ 40 (416)
T ss_dssp ----------------------------------
T ss_pred ccHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 5788889999999999999999999999999754
No 165
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=56.58 E-value=12 Score=37.84 Aligned_cols=110 Identities=10% Similarity=0.101 Sum_probs=65.3
Q ss_pred HHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC-------ccc------cccHHHHHHHHHHHh
Q 011677 343 WEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW-------INQ------IGTVTEAIEVVKLAN 408 (479)
Q Consensus 343 ~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik-------~~~------~Ggitea~~i~~~A~ 408 (479)
.+..+++++.+ +||+... +++++.++.+++.+ +|+| .+- ..+ ...++...++++.++
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~--V~t~e~A~~a~~aG-AD~I------~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~ 243 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGN--VVTEEATKELIENG-ADGI------KVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS 243 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEE--ECSHHHHHHHHHTT-CSEE------EECC---------CCSCBCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCeEEEee--cCCHHHHHHHHHcC-CCEE------EEeCCCCcCcccccccccchhHHHHHHHHHHHHH
Confidence 56677888887 7776543 34588888887765 7877 441 111 234556667777777
Q ss_pred hCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccc
Q 011677 409 DVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDY 475 (479)
Q Consensus 409 ~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~ 475 (479)
+.+++++........ ... --|+++|+..+..|.. |+.-+|-.+....+.|+.|
T Consensus 244 ~~~IPVIA~GGI~~~-~di--~kalalGAd~V~vGt~-----------f~~t~Es~~~~~~~~g~~~ 296 (400)
T 3ffs_A 244 KFGIPIIADGGIRYS-GDI--GKALAVGASSVMIGSI-----------LAGTEESPGEKELIGDTVY 296 (400)
T ss_dssp TTTCCEEEESCCCSH-HHH--HHHHTTTCSEEEECGG-----------GTTBTTSSCCEEESSSSEE
T ss_pred hcCCCEEecCCCCCH-HHH--HHHHHcCCCEEEEChH-----------HhcCCCCCchhhhcCCeee
Confidence 789998775543222 222 2234456777777754 4444554455555556555
No 166
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=55.68 E-value=5 Score=40.28 Aligned_cols=66 Identities=14% Similarity=-0.049 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHhhCCceeeecCCC------c--cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 313 KSGEDMIEMYKELCADYPIVSIEDPFD------K--EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iEdP~~------~--~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
++.++++++ .+.++++++.||+-+-. + .+++..+++++.+ +||++...+ + ++++++.++.+.+|+|
T Consensus 253 ~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i-~-~~~a~~~l~~g~aD~V 327 (376)
T 1icp_A 253 NPTALGLYM-VESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY-D-REDGNRALIEDRADLV 327 (376)
T ss_dssp CHHHHHHHH-HHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC-C-HHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHH-HHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC-C-HHHHHHHHHCCCCcEE
Confidence 355667765 56689999999987532 1 2334457788888 898766655 4 9999999999999999
No 167
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=55.61 E-value=22 Score=35.31 Aligned_cols=64 Identities=9% Similarity=-0.068 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 315 GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.+++ .+.+++.++.||+-.-.....+-.+++++.+ +||++...+ +++++++.++.+.+|.|
T Consensus 241 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi--t~e~a~~~l~~g~aD~V 305 (362)
T 4ab4_A 241 AETFTYV-ARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNERF--DKASANAALASGKADAV 305 (362)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHH-HHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCCC--CHHHHHHHHHcCCccEE
Confidence 4556655 5668899999998543321112356788888 886654444 49999999999999998
No 168
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=54.95 E-value=28 Score=32.17 Aligned_cols=112 Identities=8% Similarity=-0.011 Sum_probs=67.3
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhc-------C-Ccccc-CHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVG-------D-DLLMS-NPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~g-------d-e~~~t-~~~~~~~~i~~~a~d~v 381 (479)
..++..+.++ .+...+.+...|+= ...+..+++++.+ +||+| | +.+.+ +.+++..+++.+ +|+|
T Consensus 32 l~~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V 105 (232)
T 3igs_A 32 LDKPEIVAAM-ALAAEQAGAVAVRI----EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAII 105 (232)
T ss_dssp TCSHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEE
T ss_pred CCCcchHHHH-HHHHHHCCCeEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEE
Confidence 3356666665 34467778777663 4678899999999 99775 1 13333 355777777665 7788
Q ss_pred cccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCc
Q 011677 382 FSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQI 440 (479)
Q Consensus 382 ~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~i 440 (479)
.+............++++.+++.|+.+++...+. --+.-|...|+.++
T Consensus 106 ------~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-----eea~~a~~~Gad~I 153 (232)
T 3igs_A 106 ------AVDGTARQRPVAVEALLARIHHHHLLTMADCSSV-----DDGLACQRLGADII 153 (232)
T ss_dssp ------EEECCSSCCSSCHHHHHHHHHHTTCEEEEECCSH-----HHHHHHHHTTCSEE
T ss_pred ------EECccccCCHHHHHHHHHHHHHCCCEEEEeCCCH-----HHHHHHHhCCCCEE
Confidence 6655432111234455566777888887655332 11334445566555
No 169
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=54.54 E-value=24 Score=35.03 Aligned_cols=64 Identities=5% Similarity=-0.162 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 315 GEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.+++ .+.+++.++.||+-.-.....+-.+++++.+ +||++...+ +++++++.++.+.+|.|
T Consensus 249 ~~~~~~l-a~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi--t~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 249 AATFGHV-ARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNENF--TLDSAQAALDAGQADAV 313 (361)
T ss_dssp HHHHHHH-HHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHH-HHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCCC--CHHHHHHHHHcCCccEE
Confidence 4566655 5668899999998654322113356788888 886655444 49999999999999998
No 170
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=54.28 E-value=30 Score=33.89 Aligned_cols=129 Identities=12% Similarity=0.037 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeec--CCC-ccCHHHHHHHHhh------h--hhhhcCCccccCHHHHHHHhcCCCCce
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIED--PFD-KEDWEHTKSVLQI------C--QQVVGDDLLMSNPKRIERATLIPLAML 380 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEd--P~~-~~D~~g~~~L~~~------~--~~I~gde~~~t~~~~~~~~i~~~a~d~ 380 (479)
.++.++.++++...+++.++.+||= |.. ++|++..+++++. + +.+++- ..+.++++.+++.+ +|.
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l---~~~~~~i~~a~~~g-~~~ 112 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGF---VDGNKTVDWIKDSG-AKV 112 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEE---SSTTHHHHHHHHHT-CCE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEE---ccchhhHHHHHHCC-CCE
Confidence 4688999987651578899999997 553 7777888888773 3 333332 12334777776654 355
Q ss_pred e---cccCC----CCcCccccccHHHHHHHHHHHhhCCCeEEEecCC----CCCchhHHHHh---HhhcCCCCcccCC
Q 011677 381 F---FSRYP----SNLWINQIGTVTEAIEVVKLANDVPWGVVISHRS----GETEDSFIADL---SVGLASGQIKAGA 444 (479)
Q Consensus 381 v---~~~~~----~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~----get~d~~~~dl---Av~~~~~~ik~G~ 444 (479)
| .+-++ .+++.+.-..+..+.++++.|+++|..+.++... +.++..+++++ +...|+..+.+.+
T Consensus 113 v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~D 190 (337)
T 3ble_A 113 LNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPD 190 (337)
T ss_dssp EEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 4 11111 0122222234567778889999999998766532 12334444444 4556787775443
No 171
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=51.96 E-value=16 Score=38.16 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=61.0
Q ss_pred cCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc-------cc------cccHHHH
Q 011677 336 DPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI-------NQ------IGTVTEA 400 (479)
Q Consensus 336 dP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~-------~~------~Ggitea 400 (479)
+|....-++..+++++.. +||++.+. .+.+..+.+++.+ +|+| .+-. .+ ...++..
T Consensus 278 ~g~~~~v~~~i~~i~~~~~~~~vi~g~v--~t~e~a~~~~~aG-ad~i------~vg~g~gsi~~~~~~~g~g~p~~~~l 348 (511)
T 3usb_A 278 HGHSQGVIDKVKEVRAKYPSLNIIAGNV--ATAEATKALIEAG-ANVV------KVGIGPGSICTTRVVAGVGVPQLTAV 348 (511)
T ss_dssp CTTSHHHHHHHHHHHHHCTTSEEEEEEE--CSHHHHHHHHHHT-CSEE------EECSSCSTTCCHHHHHCCCCCHHHHH
T ss_pred ccchhhhhhHHHHHHHhCCCceEEeeee--ccHHHHHHHHHhC-CCEE------EECCCCccccccccccCCCCCcHHHH
Confidence 343334445667777776 67776653 4588888887766 6777 4311 11 2346667
Q ss_pred HHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCC
Q 011677 401 IEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 401 ~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~ 445 (479)
.++++.+++.+++++.+.......|. .. |+++|+..+-.|.+
T Consensus 349 ~~v~~~~~~~~iPVIa~GGI~~~~di-~k--ala~GA~~V~vGs~ 390 (511)
T 3usb_A 349 YDCATEARKHGIPVIADGGIKYSGDM-VK--ALAAGAHVVMLGSM 390 (511)
T ss_dssp HHHHHHHHTTTCCEEEESCCCSHHHH-HH--HHHTTCSEEEESTT
T ss_pred HHHHHHHHhCCCcEEEeCCCCCHHHH-HH--HHHhCchhheecHH
Confidence 78888889899998876654433222 11 34556777777765
No 172
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=51.94 E-value=40 Score=31.06 Aligned_cols=112 Identities=10% Similarity=-0.016 Sum_probs=66.8
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCCccCHHHHHHHHhhh-hhhhc---CC-----cccc-CHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFDKEDWEHTKSVLQIC-QQVVG---DD-----LLMS-NPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~-~~I~g---de-----~~~t-~~~~~~~~i~~~a~d~v 381 (479)
..++..+.++ .+...+-+...|+= ...+..+++++.+ +||.| .+ .+.+ +.+++..+.+.+ +|+|
T Consensus 32 l~~~~~~~~~-A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG-ad~I 105 (229)
T 3q58_A 32 MDKPEIVAAM-AQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG-ADII 105 (229)
T ss_dssp TCSHHHHHHH-HHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEE
T ss_pred CCCcchHHHH-HHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC-CCEE
Confidence 3456667765 34467778776662 5678899999999 99763 21 3333 345777776665 7788
Q ss_pred cccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCc
Q 011677 382 FSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQI 440 (479)
Q Consensus 382 ~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~i 440 (479)
.++...........++++.+++.|+.+++...+. --+.-|...|+.++
T Consensus 106 ------~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~-----eea~~a~~~Gad~I 153 (229)
T 3q58_A 106 ------AFDASFRSRPVDIDSLLTRIRLHGLLAMADCSTV-----NEGISCHQKGIEFI 153 (229)
T ss_dssp ------EEECCSSCCSSCHHHHHHHHHHTTCEEEEECSSH-----HHHHHHHHTTCSEE
T ss_pred ------EECccccCChHHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHhCCCCEE
Confidence 6655432111234455556677788887655321 11334445566666
No 173
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=51.00 E-value=17 Score=37.79 Aligned_cols=106 Identities=10% Similarity=0.053 Sum_probs=64.4
Q ss_pred hCCceeee----cCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC-------ccc-
Q 011677 328 DYPIVSIE----DPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW-------INQ- 393 (479)
Q Consensus 328 ~~~i~~iE----dP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik-------~~~- 393 (479)
+.++..|+ .|....-++..+++++.. +||++.. +.+++.++.+++.+ +|+| .+- ..+
T Consensus 239 ~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~--v~t~e~a~~l~~aG-aD~I------~vg~g~Gs~~~t~~ 309 (490)
T 4avf_A 239 AAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN--IATAEAAKALAEAG-ADAV------KVGIGPGSICTTRI 309 (490)
T ss_dssp HTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHTT-CSEE------EECSSCSTTCHHHH
T ss_pred hcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee--eCcHHHHHHHHHcC-CCEE------EECCCCCcCCCccc
Confidence 34555555 344444457778888876 6766654 34588888888766 7888 431 011
Q ss_pred -----cccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCC
Q 011677 394 -----IGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 394 -----~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~ 445 (479)
...++...++++.++..+++++.+.......| ... |++.|+..+-.|..
T Consensus 310 ~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~d-i~k--al~~GAd~V~vGs~ 363 (490)
T 4avf_A 310 VAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGD-LAK--AMVAGAYCVMMGSM 363 (490)
T ss_dssp HTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHH-HHH--HHHHTCSEEEECTT
T ss_pred cCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHH-HHH--HHHcCCCeeeecHH
Confidence 23456667777778788999877654432222 222 33446777777754
No 174
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=50.96 E-value=99 Score=25.13 Aligned_cols=103 Identities=10% Similarity=-0.004 Sum_probs=61.1
Q ss_pred CchHHHHHHHHHHHHhcCCCCCceeecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCC
Q 011677 260 SSIREGLDLVKEAINRTGIPSSKWSDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFD 339 (479)
Q Consensus 260 ~~~~~~l~~v~~ai~~~g~~~~~iiD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~ 339 (479)
+++....+.+++.++..|+. +..+ -+.+++++.+.+ ..+.+..+.--++
T Consensus 21 dd~~~~~~~l~~~L~~~g~~----v~~~-------------------------~~~~~a~~~l~~--~~~dlvi~D~~l~ 69 (153)
T 3hv2_A 21 DSQEVILQRLQQLLSPLPYT----LHFA-------------------------RDATQALQLLAS--REVDLVISAAHLP 69 (153)
T ss_dssp CSCHHHHHHHHHHHTTSSCE----EEEE-------------------------SSHHHHHHHHHH--SCCSEEEEESCCS
T ss_pred CCCHHHHHHHHHHhcccCcE----EEEE-------------------------CCHHHHHHHHHc--CCCCEEEEeCCCC
Confidence 34456667777777655644 4331 156777766533 3466888887777
Q ss_pred ccC-HHHHHHHHhhh--hhh--hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHH
Q 011677 340 KED-WEHTKSVLQIC--QQV--VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIE 402 (479)
Q Consensus 340 ~~D-~~g~~~L~~~~--~~I--~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~ 402 (479)
..| ++-.++|++.. +|| +.+. .+.....+++..++++.+ ..|+....-+..+++
T Consensus 70 ~~~g~~~~~~l~~~~~~~~ii~~s~~---~~~~~~~~~~~~g~~~~~------l~KP~~~~~l~~~i~ 128 (153)
T 3hv2_A 70 QMDGPTLLARIHQQYPSTTRILLTGD---PDLKLIAKAINEGEIYRY------LSKPWDDQELLLALR 128 (153)
T ss_dssp SSCHHHHHHHHHHHCTTSEEEEECCC---CCHHHHHHHHHTTCCSEE------ECSSCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHhHCCCCeEEEEECC---CCHHHHHHHHhCCCcceE------EeCCCCHHHHHHHHH
Confidence 554 45567777654 443 2332 236667788888855556 677766554444443
No 175
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.89 E-value=22 Score=35.34 Aligned_cols=67 Identities=12% Similarity=-0.010 Sum_probs=49.4
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCC------ccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFD------KEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~------~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.++++++ .+.++++++.||+-.-. ...++-.+++++.+ +||++-.-+ +++++.+.++.+.+|.|
T Consensus 246 ~~~~~~~~~~-a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi--~~~~a~~~l~~g~aD~V 319 (365)
T 2gou_A 246 ADPILTYTAA-AALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY--NAEKAEQAINDGLADMI 319 (365)
T ss_dssp SSHHHHHHHH-HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC--CHHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC--CHHHHHHHHHCCCccee
Confidence 3466777765 45688999998886432 12355567888888 887765544 49999999999999999
No 176
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=47.73 E-value=14 Score=35.22 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHhhCCceeee----cCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCC
Q 011677 313 KSGEDMIEMYKELCADYPIVSIE----DPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPS 387 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iE----dP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~ 387 (479)
+++.+++..| ++.+..+|. +++-...++.++.+++.+ +||.-.+.. -++.++..+...+ +|+|
T Consensus 72 ~~p~~~A~~y----~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfi-id~~qv~~A~~~G-AD~V------ 139 (272)
T 3qja_A 72 ADPAKLAQAY----QDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFV-VQPYQIHEARAHG-ADML------ 139 (272)
T ss_dssp -CHHHHHHHH----HHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEESCC-CSHHHHHHHHHTT-CSEE------
T ss_pred CCHHHHHHHH----HHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEECccc-cCHHHHHHHHHcC-CCEE------
Confidence 3556665443 445555544 333333456678888888 887666644 4588888887665 6777
Q ss_pred CcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccC
Q 011677 388 NLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAG 443 (479)
Q Consensus 388 ~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G 443 (479)
.+-.. .-...+..++.+.|++.|+.+++...+. .. +..|...|+.++-++
T Consensus 140 lLi~a-~l~~~~l~~l~~~a~~lGl~~lvev~t~---ee--~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 140 LLIVA-ALEQSVLVSMLDRTESLGMTALVEVHTE---QE--ADRALKAGAKVIGVN 189 (272)
T ss_dssp EEEGG-GSCHHHHHHHHHHHHHTTCEEEEEESSH---HH--HHHHHHHTCSEEEEE
T ss_pred EEecc-cCCHHHHHHHHHHHHHCCCcEEEEcCCH---HH--HHHHHHCCCCEEEEC
Confidence 54211 1235567778888999999988765321 11 344555567766554
No 177
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=47.50 E-value=37 Score=30.30 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCC---CccCHHHHHHHHhh-h-hhhhcCCccccCHHH-HHHHhcCCCCceecccCCC
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPF---DKEDWEHTKSVLQI-C-QQVVGDDLLMSNPKR-IERATLIPLAMLFFSRYPS 387 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~---~~~D~~g~~~L~~~-~-~~I~gde~~~t~~~~-~~~~i~~~a~d~v~~~~~~ 387 (479)
+.++.++....+ .. ++.+||+-+ -..-++..+++++. . +||..|=.+...++. ++.+.+.+ +|.+
T Consensus 11 ~~~~~~~~~~~~-~~-~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~G-ad~v------ 81 (211)
T 3f4w_A 11 TLPEAMVFMDKV-VD-DVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAG-ADYV------ 81 (211)
T ss_dssp CHHHHHHHHHHH-GG-GCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTT-CSEE------
T ss_pred CHHHHHHHHHHh-hc-CccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcC-CCEE------
Confidence 567888776654 43 688999864 34556778888887 4 777554332222444 56666655 6777
Q ss_pred CcCccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccC
Q 011677 388 NLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAG 443 (479)
Q Consensus 388 ~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G 443 (479)
.+-.. .+-....++.+.++++|+++++.-...+|. .-.+..+...|+.++.+.
T Consensus 82 ~v~~~--~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~-~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 82 TVLGV--TDVLTIQSCIRAAKEAGKQVVVDMICVDDL-PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EEETT--SCHHHHHHHHHHHHHHTCEEEEECTTCSSH-HHHHHHHHHHTCCEEEEE
T ss_pred EEeCC--CChhHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHcCCCEEEEc
Confidence 55322 223344677788899999987642222332 122455666678888754
No 178
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=45.76 E-value=46 Score=31.89 Aligned_cols=129 Identities=15% Similarity=0.006 Sum_probs=74.5
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCC--c------cCHH-HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCce
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFD--K------EDWE-HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAML 380 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~--~------~D~~-g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~ 380 (479)
..++.++.++++ +.+++.++..||--+. + .|.+ -++.+.+.. +++++ ...+.++++++++.+ ++.
T Consensus 25 ~~~~~e~k~~i~-~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---l~~~~~~i~~a~~aG-~~~ 99 (302)
T 2ftp_A 25 QPIEVADKIRLV-DDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAA---LAPNLKGFEAALESG-VKE 99 (302)
T ss_dssp SCCCHHHHHHHH-HHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEE---ECCSHHHHHHHHHTT-CCE
T ss_pred CCCCHHHHHHHH-HHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEE---EeCCHHHHHHHHhCC-cCE
Confidence 356889999876 4578999999998531 1 2432 223443322 44432 113688999998876 455
Q ss_pred e---cccCC----CCcCccccccHHHHHHHHHHHhhCCCeEE--EecCC-----CCCchhHHHHhHh---hcCCCCcccC
Q 011677 381 F---FSRYP----SNLWINQIGTVTEAIEVVKLANDVPWGVV--ISHRS-----GETEDSFIADLSV---GLASGQIKAG 443 (479)
Q Consensus 381 v---~~~~~----~~ik~~~~Ggitea~~i~~~A~~~g~~~~--v~h~~-----get~d~~~~dlAv---~~~~~~ik~G 443 (479)
| ++-++ .+++.+.---+..+.+++++|+++|+.+. +++.. +.++..++.+++- ..|+..+.+.
T Consensus 100 v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 100 VAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp EEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 5 00000 01122223345567888899999999874 23321 2355566666654 6677777544
Q ss_pred C
Q 011677 444 A 444 (479)
Q Consensus 444 ~ 444 (479)
+
T Consensus 180 D 180 (302)
T 2ftp_A 180 D 180 (302)
T ss_dssp E
T ss_pred C
Confidence 3
No 179
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=44.46 E-value=41 Score=31.78 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHHHHhhC-C-ceee-ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCC
Q 011677 313 KSGEDMIEMYKELCADY-P-IVSI-EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSN 388 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~-~-i~~i-EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ 388 (479)
.++.+..++| +.. . |.-+ |.++-...++.++.+++.+ +||.--|.. -++.++.+.-..+ +|+| .
T Consensus 64 ~dp~~iA~~~----~~GA~aiSVLTd~~~F~Gs~~~L~~vr~~v~lPvLrKDFi-id~yQI~eAr~~G-ADaI------L 131 (258)
T 4a29_A 64 RDPIEYAKFM----ERYAVGLSITTEEKYFNGSYETLRKIASSVSIPILMSDFI-VKESQIDDAYNLG-ADTV------L 131 (258)
T ss_dssp CCHHHHHHHH----TTTCSEEEEECCSTTTCCCHHHHHHHHTTCSSCEEEESCC-CSHHHHHHHHHHT-CSEE------E
T ss_pred CCHHHHHHHH----hCCCeEEEEeCCCCCCCCCHHHHHHHHHhcCCCEeecccc-ccHHHHHHHHHcC-CCee------e
Confidence 3666666554 222 2 4333 6668888999999999999 998887854 4588888765444 7887 6
Q ss_pred cCccccccHHHHHHHHHHHhhCCCeEEEec
Q 011677 389 LWINQIGTVTEAIEVVKLANDVPWGVVISH 418 (479)
Q Consensus 389 ik~~~~Ggitea~~i~~~A~~~g~~~~v~h 418 (479)
+-..-. +-.+..+..++|++.|+.+++--
T Consensus 132 LI~a~L-~~~~l~~l~~~A~~lGl~~LvEV 160 (258)
T 4a29_A 132 LIVKIL-TERELESLLEYARSYGMEPLILI 160 (258)
T ss_dssp EEGGGS-CHHHHHHHHHHHHHTTCCCEEEE
T ss_pred hHHhhc-CHHHHHHHHHHHHHHhHHHHHhc
Confidence 544433 34567888999999999988743
No 180
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=43.56 E-value=50 Score=31.61 Aligned_cols=134 Identities=14% Similarity=0.104 Sum_probs=77.4
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCCc---cCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcC---CCCcee-
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFDK---EDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLI---PLAMLF- 381 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~---~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~---~a~d~v- 381 (479)
..++.++.+++.. .|.+.++..||=-++. +|++..+.+.+.. +.+++= ...+..++...++. -..+.|
T Consensus 22 ~~~~~~~K~~i~~-~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l--~~~~~~di~~a~~~~~~ag~~~v~ 98 (293)
T 3ewb_X 22 VNFDVKEKIQIAL-QLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGL--ARCVEGDIDRAEEALKDAVSPQIH 98 (293)
T ss_dssp -CCCHHHHHHHHH-HHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEE--EESSHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCCHHHHHHHHH-HHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEE--ecCCHHHHHHHHHHHhhcCCCEEE
Confidence 3678999998764 5788999999987754 4566666665544 322211 11235666666542 223433
Q ss_pred --cccCCC----CcCccccccHHHHHHHHHHHhhCCCeEEEecC-CCCCchhHH---HHhHhhcCCCCcccCCCCc
Q 011677 382 --FSRYPS----NLWINQIGTVTEAIEVVKLANDVPWGVVISHR-SGETEDSFI---ADLSVGLASGQIKAGAPCR 447 (479)
Q Consensus 382 --~~~~~~----~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~-~get~d~~~---~dlAv~~~~~~ik~G~~~~ 447 (479)
.|-++. +++-+.--.+..+.+++++|+++|..+..+.. .+.++..++ +..+...|+..+.+.+..+
T Consensus 99 i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G 174 (293)
T 3ewb_X 99 IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVG 174 (293)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC
Confidence 111111 23333344455667888899999999876553 233444544 4445566888776555443
No 181
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=40.38 E-value=68 Score=28.34 Aligned_cols=108 Identities=12% Similarity=-0.033 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccC-HHHHHHHHhhh---hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCc
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKED-WEHTKSVLQIC---QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNL 389 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D-~~g~~~L~~~~---~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i 389 (479)
+.+++.++ .+.+.+.++.+||=.+...+ .+..+++++.+ .+|..+. +.++++++.+++.+ +|++ .-
T Consensus 20 ~~~~~~~~-~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~~G-ad~i------v~ 89 (205)
T 1wa3_A 20 SVEEAKEK-ALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVESG-AEFI------VS 89 (205)
T ss_dssp SHHHHHHH-HHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHHHT-CSEE------EC
T ss_pred CHHHHHHH-HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHHcC-CCEE------Ec
Confidence 56777765 45578889888875444323 23466666654 2222222 34688888887755 6777 21
Q ss_pred CccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccC
Q 011677 390 WINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAG 443 (479)
Q Consensus 390 k~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G 443 (479)
++ .. -++++.++++|++++.+..+++ -+..|...|+..+|+-
T Consensus 90 -~~----~~--~~~~~~~~~~g~~vi~g~~t~~-----e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 90 -PH----LD--EEISQFCKEKGVFYMPGVMTPT-----ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -SS----CC--HHHHHHHHHHTCEEECEECSHH-----HHHHHHHTTCCEEEET
T ss_pred -CC----CC--HHHHHHHHHcCCcEECCcCCHH-----HHHHHHHcCCCEEEEc
Confidence 11 11 2466778889999877553211 1345566677777653
No 182
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=40.10 E-value=94 Score=29.36 Aligned_cols=114 Identities=10% Similarity=0.061 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHHhh--CCceee------ecCCCccCHHHHHHHHhhh-------hhhhcCCccccCHHHHHHHhcCC
Q 011677 312 FKSGEDMIEMYKELCAD--YPIVSI------EDPFDKEDWEHTKSVLQIC-------QQVVGDDLLMSNPKRIERATLIP 376 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~--~~i~~i------EdP~~~~D~~g~~~L~~~~-------~~I~gde~~~t~~~~~~~~i~~~ 376 (479)
-.|++|++.. .++..+ ++..|| |++.---|....-+..+.+ +|.|.|+. ...+++.+.
T Consensus 83 ~~ta~eAv~~-a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~-----~~akrl~~~- 155 (265)
T 1wv2_A 83 CYDAVEAVRT-CRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDP-----IIARQLAEI- 155 (265)
T ss_dssp CCSHHHHHHH-HHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCH-----HHHHHHHHS-
T ss_pred CCCHHHHHHH-HHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHh-
Confidence 6699999965 676666 356676 4554445555544444433 56777774 334444444
Q ss_pred CCceecccCCCCcCcccccc---HHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcc
Q 011677 377 LAMLFFSRYPSNLWINQIGT---VTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIK 441 (479)
Q Consensus 377 a~d~v~~~~~~~ik~~~~Gg---itea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik 441 (479)
.|++| .+-...+|+ ++..--+-.+.+..++++++..+.+..+|. -.|+-+|+.-+-
T Consensus 156 G~~aV------mPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDA---a~AmeLGAdgVl 214 (265)
T 1wv2_A 156 GCIAV------MPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDA---AIAMELGCEAVL 214 (265)
T ss_dssp CCSEE------EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHH---HHHHHHTCSEEE
T ss_pred CCCEE------EeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHH---HHHHHcCCCEEE
Confidence 48888 775554443 333222333455678999887666544432 334444554443
No 183
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=40.06 E-value=21 Score=35.63 Aligned_cols=109 Identities=12% Similarity=0.193 Sum_probs=64.5
Q ss_pred HHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC--c-cc----------cccHHHHHHHHHHHh
Q 011677 344 EHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW--I-NQ----------IGTVTEAIEVVKLAN 408 (479)
Q Consensus 344 ~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik--~-~~----------~Ggitea~~i~~~A~ 408 (479)
+..+++++.. ++|++.. +.+++.++.+++.+ +|+| .+- + .. ...++...++++.++
T Consensus 138 ~~I~~ik~~~p~v~Vi~G~--v~t~e~A~~a~~aG-AD~I------~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~ 208 (366)
T 4fo4_A 138 QRIRETRAAYPHLEIIGGN--VATAEGARALIEAG-VSAV------KVGIGPGSICTTRIVTGVGVPQITAIADAAGVAN 208 (366)
T ss_dssp HHHHHHHHHCTTCEEEEEE--ECSHHHHHHHHHHT-CSEE------EECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHG
T ss_pred HHHHHHHHhcCCCceEeee--eCCHHHHHHHHHcC-CCEE------EEecCCCCCCCcccccCcccchHHHHHHHHHHHh
Confidence 4456777775 6665543 34688888887765 7888 441 1 11 233555666777778
Q ss_pred hCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCCCchhHHHHhHHHHHHHHHhCCCccccCccc
Q 011677 409 DVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAPCRGERLAKYNQLLHIEEELGDHAIYAGEDY 475 (479)
Q Consensus 409 ~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~~~er~~kyn~ll~ie~~l~~~~~~~~~~~ 475 (479)
..+++++.........| +--|+++|+..+-.|.. |+.-+|-.+....+.|+.|
T Consensus 209 ~~~iPVIA~GGI~~~~d---i~kala~GAd~V~vGs~-----------f~~t~Esp~~~~~~~g~~~ 261 (366)
T 4fo4_A 209 EYGIPVIADGGIRFSGD---ISKAIAAGASCVMVGSM-----------FAGTEEAPGEVILYQGRSY 261 (366)
T ss_dssp GGTCCEEEESCCCSHHH---HHHHHHTTCSEEEESTT-----------TTTBTTSSSCCEEETTEEE
T ss_pred hcCCeEEEeCCCCCHHH---HHHHHHcCCCEEEEChH-----------hhcCCCCCchhhhhCCcee
Confidence 88999877554432222 22344556788877765 3343444555555555554
No 184
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=38.95 E-value=24 Score=35.24 Aligned_cols=67 Identities=4% Similarity=-0.237 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCCC------c-cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPFD------K-EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~~------~-~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.++.+++ .+.++++++.||+-.-. + .+++-.+++++.+ +||++-.-+ + ++++.++++.+.+|.|
T Consensus 251 ~~~~~~~~~l-a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi-~-~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 251 DEPEAMAFYL-AGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY-D-AGRAQARLDDNTADAV 325 (377)
T ss_dssp SCHHHHHHHH-HHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC-C-HHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHH-HHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC-C-HHHHHHHHHCCCceEE
Confidence 4566777765 45688999988885321 1 1455567888888 887765544 4 9999999999999999
No 185
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=38.77 E-value=24 Score=34.93 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=54.7
Q ss_pred HHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCcc-------------ccccHHHHHHHHHHH
Q 011677 343 WEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWIN-------------QIGTVTEAIEVVKLA 407 (479)
Q Consensus 343 ~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~-------------~~Ggitea~~i~~~A 407 (479)
++..+++++.. +||+... +.++++.+.+++.+ +|+| .+-.. -..+++-..++.+.+
T Consensus 149 ~~~i~~lr~~~~~~~vi~g~--v~t~e~A~~a~~aG-aD~I------~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~ 219 (351)
T 2c6q_A 149 VEFVKDVRKRFPQHTIMAGN--VVTGEMVEELILSG-ADII------KVGIGPGSVCTTRKKTGVGYPQLSAVMECADAA 219 (351)
T ss_dssp HHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHTT-CSEE------EECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEe--CCCHHHHHHHHHhC-CCEE------EECCCCCcCcCccccCCCCccHHHHHHHHHHHH
Confidence 45566677765 6655332 34589998888776 7877 44211 112344556677777
Q ss_pred hhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCCC
Q 011677 408 NDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAPC 446 (479)
Q Consensus 408 ~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~ 446 (479)
+..+++++....... .... -=|+++|+..+-.|.+.
T Consensus 220 ~~~~ipvIa~GGI~~-g~di--~kAlalGA~~V~vG~~f 255 (351)
T 2c6q_A 220 HGLKGHIISDGGCSC-PGDV--AKAFGAGADFVMLGGML 255 (351)
T ss_dssp HHTTCEEEEESCCCS-HHHH--HHHHHTTCSEEEESTTT
T ss_pred hhcCCcEEEeCCCCC-HHHH--HHHHHcCCCceeccHHH
Confidence 778899877554322 2222 23445567777777763
No 186
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=36.18 E-value=40 Score=34.98 Aligned_cols=94 Identities=7% Similarity=0.097 Sum_probs=57.6
Q ss_pred ccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC-------ccc------cccHHHHHHHH
Q 011677 340 KEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW-------INQ------IGTVTEAIEVV 404 (479)
Q Consensus 340 ~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik-------~~~------~Ggitea~~i~ 404 (479)
..-++..+++++.. +||++.. +.+++.++.+++.+ +|+| .+- ..+ ...++...+++
T Consensus 257 ~~~~~~i~~ir~~~p~~~Vi~g~--v~t~e~a~~l~~aG-aD~I------~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~ 327 (496)
T 4fxs_A 257 EGVLQRIRETRAAYPHLEIIGGN--VATAEGARALIEAG-VSAV------KVGIGPGSICTTRIVTGVGVPQITAIADAA 327 (496)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEE--ECSHHHHHHHHHHT-CSEE------EECSSCCTTBCHHHHHCCCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCceEEEcc--cCcHHHHHHHHHhC-CCEE------EECCCCCcCcccccccCCCccHHHHHHHHH
Confidence 33446667777776 6776644 34588888887765 6777 431 111 22456667788
Q ss_pred HHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCC
Q 011677 405 KLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 405 ~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~ 445 (479)
+.+++.+++++.+.......|. .. |++.|+..+-.|..
T Consensus 328 ~~~~~~~iPVIa~GGI~~~~di-~k--ala~GAd~V~iGs~ 365 (496)
T 4fxs_A 328 GVANEYGIPVIADGGIRFSGDI-SK--AIAAGASCVMVGSM 365 (496)
T ss_dssp HHHGGGTCCEEEESCCCSHHHH-HH--HHHTTCSEEEESTT
T ss_pred HHhccCCCeEEEeCCCCCHHHH-HH--HHHcCCCeEEecHH
Confidence 8888889998776554333222 11 34456777777754
No 187
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=34.37 E-value=54 Score=31.57 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=36.2
Q ss_pred cHHHHHHHHHHHhhCCCeEEEecCCC---CCc-h--hHHHHhHhhcCCCCcccCCC
Q 011677 396 TVTEAIEVVKLANDVPWGVVISHRSG---ETE-D--SFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 396 gitea~~i~~~A~~~g~~~~v~h~~g---et~-d--~~~~dlAv~~~~~~ik~G~~ 445 (479)
.+.++.++.+.|+++|+++|+-...| .++ + ...+.+|..+|+.++|+.-+
T Consensus 156 ~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t 211 (295)
T 3glc_A 156 SIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV 211 (295)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 46667788889999999998732111 122 2 34789999999999999865
No 188
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=32.85 E-value=1.3e+02 Score=27.37 Aligned_cols=107 Identities=11% Similarity=0.144 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccC-HHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcC
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKED-WEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLW 390 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D-~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik 390 (479)
+.+++++.... +-+.++.+||=.+...+ .+..++|++++ +.+-.+- .. +.++++.+++.+ +|++ ..
T Consensus 27 ~~~~~~~~~~a-l~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aG-Ad~v------~~- 95 (224)
T 1vhc_A 27 NADDILPLADT-LAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSG-ADFV------VT- 95 (224)
T ss_dssp SGGGHHHHHHH-HHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHT-CSEE------EC-
T ss_pred CHHHHHHHHHH-HHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCC-CCEE------EE-
Confidence 45566665544 45788999999886443 45566677776 3333343 33 478888888777 6777 22
Q ss_pred ccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCccc
Q 011677 391 INQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKA 442 (479)
Q Consensus 391 ~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~ 442 (479)
|+ .-..+++.|+++|.++++|..+ . .=+--|...|+.++|+
T Consensus 96 ----p~--~d~~v~~~ar~~g~~~i~Gv~t---~--~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 96 ----PG--LNPKIVKLCQDLNFPITPGVNN---P--MAIEIALEMGISAVKF 136 (224)
T ss_dssp ----SS--CCHHHHHHHHHTTCCEECEECS---H--HHHHHHHHTTCCEEEE
T ss_pred ----CC--CCHHHHHHHHHhCCCEEeccCC---H--HHHHHHHHCCCCEEEE
Confidence 11 1145667788899998887432 1 1134455667888876
No 189
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=32.28 E-value=1e+02 Score=29.44 Aligned_cols=93 Identities=11% Similarity=-0.004 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHH-hhCCceeeecCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc
Q 011677 315 GEDMIEMYKELC-ADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI 391 (479)
Q Consensus 315 ~~e~i~~~~~ll-~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~ 391 (479)
..+++....+.+ ++-+-+.+++|-...-....+....+. +|+-.+ -+++.+++.+..+..=++ ...+
T Consensus 90 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~------i~~p 159 (377)
T 3fdb_A 90 VVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSIL------LCNP 159 (377)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEE------EESS
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEE------EeCC
Confidence 455655544444 334577889997654333333322222 443222 358899998876633333 3333
Q ss_pred cc-ccc---HHHHHHHHHHHhhCCCeEEEe
Q 011677 392 NQ-IGT---VTEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 392 ~~-~Gg---itea~~i~~~A~~~g~~~~v~ 417 (479)
+. .|. ..+..+++++|+++|+.+++-
T Consensus 160 ~nptG~~~~~~~l~~l~~~~~~~~~~li~D 189 (377)
T 3fdb_A 160 YNPLGMVFAPEWLNELCDLAHRYDARVLVD 189 (377)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 22 333 348889999999999998764
No 190
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.62 E-value=2e+02 Score=23.09 Aligned_cols=102 Identities=16% Similarity=0.013 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCceeecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 261 SIREGLDLVKEAINRTGIPSSKWSDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 261 ~~~~~l~~v~~ai~~~g~~~~~iiD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
++....+.++..+...|+. +.++ -+.+++++.+.. ..+.+..+.-.++.
T Consensus 15 d~~~~~~~l~~~L~~~g~~----v~~~-------------------------~~~~~a~~~l~~--~~~dlvi~d~~l~~ 63 (154)
T 2rjn_A 15 DEQPILNSLKRLIKRLGCN----IITF-------------------------TSPLDALEALKG--TSVQLVISDMRMPE 63 (154)
T ss_dssp SCHHHHHHHHHHHHTTTCE----EEEE-------------------------SCHHHHHHHHTT--SCCSEEEEESSCSS
T ss_pred CCHHHHHHHHHHHHHcCCe----EEEe-------------------------CCHHHHHHHHhc--CCCCEEEEecCCCC
Confidence 3455666777777766654 4331 145677654322 24568888877765
Q ss_pred cC-HHHHHHHHhhh--hhh--hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHH
Q 011677 341 ED-WEHTKSVLQIC--QQV--VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIE 402 (479)
Q Consensus 341 ~D-~~g~~~L~~~~--~~I--~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~ 402 (479)
.+ ++-.++|++.. +|| +.+.. +.....+++..+.++.+ ..|+.....+..+++
T Consensus 64 ~~g~~~~~~l~~~~~~~~ii~ls~~~---~~~~~~~~~~~g~~~~~------l~kP~~~~~L~~~i~ 121 (154)
T 2rjn_A 64 MGGEVFLEQVAKSYPDIERVVISGYA---DAQATIDAVNRGKISRF------LLKPWEDEDVFKVVE 121 (154)
T ss_dssp SCHHHHHHHHHHHCTTSEEEEEECGG---GHHHHHHHHHTTCCSEE------EESSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCcEEEEecCC---CHHHHHHHHhccchhee------eeCCCCHHHHHHHHH
Confidence 44 44556666654 443 33332 25667777777756666 677766555544443
No 191
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.01 E-value=50 Score=30.90 Aligned_cols=91 Identities=14% Similarity=0.080 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHhhCC---ceee-ecCCCccCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCC
Q 011677 313 KSGEDMIEMYKELCADYP---IVSI-EDPFDKEDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPS 387 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~---i~~i-EdP~~~~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~ 387 (479)
.++.++++.| ++.+ |..+ ++.+-....+.++.+++.+ +||.-.+ +..++.++..+...+ +|.|
T Consensus 65 ~~p~~~A~~~----~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~kd-fI~d~~qi~~a~~~G-AD~V------ 132 (254)
T 1vc4_A 65 VDPVEAALAY----ARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKD-FVVDPFMLEEARAFG-ASAA------ 132 (254)
T ss_dssp CCHHHHHHHH----HHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEEES-CCCSHHHHHHHHHTT-CSEE------
T ss_pred CCHHHHHHHH----HHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEECC-cCCCHHHHHHHHHcC-CCEE------
Confidence 4566666544 3444 3333 4445556889999999998 8866555 456788888876665 6777
Q ss_pred CcCccccccHHHHHHHHHHHhhCCCeEEEe
Q 011677 388 NLWINQIGTVTEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 388 ~ik~~~~Ggitea~~i~~~A~~~g~~~~v~ 417 (479)
.+-..-.. ..+.++...|+..|+.+++-
T Consensus 133 lL~~~~l~--~~l~~l~~~a~~lGl~~lve 160 (254)
T 1vc4_A 133 LLIVALLG--ELTGAYLEEARRLGLEALVE 160 (254)
T ss_dssp EEEHHHHG--GGHHHHHHHHHHHTCEEEEE
T ss_pred EECccchH--HHHHHHHHHHHHCCCeEEEE
Confidence 55443322 46677777888899998764
No 192
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=30.35 E-value=1.4e+02 Score=28.66 Aligned_cols=98 Identities=7% Similarity=-0.136 Sum_probs=56.3
Q ss_pred HHHHHHHHH---HHHhhCCceeeecCCCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcC--CCCceecccCCC
Q 011677 315 GEDMIEMYK---ELCADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLI--PLAMLFFSRYPS 387 (479)
Q Consensus 315 ~~e~i~~~~---~ll~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~--~a~d~v~~~~~~ 387 (479)
..+++.... .++++-+-+.+++|-...-...++....++ +|+.-++...-+++.+++.+.+ ....++
T Consensus 104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v------ 177 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVL------ 177 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEE------
T ss_pred cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEE------
Confidence 345554432 334555578899997754433333333233 4432122233368889998874 223444
Q ss_pred Cc-Cc-c---ccccHHHHHHHHHHHhhCCCeEEEec
Q 011677 388 NL-WI-N---QIGTVTEAIEVVKLANDVPWGVVISH 418 (479)
Q Consensus 388 ~i-k~-~---~~Ggitea~~i~~~A~~~g~~~~v~h 418 (479)
.+ .+ | .+....+..+++++|+++|+.+++--
T Consensus 178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 213 (397)
T 3fsl_A 178 LHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDI 213 (397)
T ss_dssp ECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEec
Confidence 22 22 2 33344788899999999999887643
No 193
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=29.41 E-value=1.1e+02 Score=29.32 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHH-hhCCceeeecCCCccCHHHHHHHHhhh--hhhh-cCCccccCHHHHHHHhcCCCCceecccCCCCc-
Q 011677 315 GEDMIEMYKELC-ADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVV-GDDLLMSNPKRIERATLIPLAMLFFSRYPSNL- 389 (479)
Q Consensus 315 ~~e~i~~~~~ll-~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~-gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i- 389 (479)
..+++......+ ++-+-+.+++|-...-....+.+.... +|+- .+..+.-+++.+++.+......+| .+
T Consensus 94 ~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v------~i~ 167 (391)
T 3dzz_A 94 VVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMM------VFC 167 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEE------EEE
T ss_pred HHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEE------EEE
Confidence 355555444433 344577889987654222222222222 4432 233232468999999874445555 32
Q ss_pred Cc-cccccH---HHHHHHHHHHhhCCCeEEEe
Q 011677 390 WI-NQIGTV---TEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 390 k~-~~~Ggi---tea~~i~~~A~~~g~~~~v~ 417 (479)
.+ |-.|.+ .+..+++++|+++|+.+++-
T Consensus 168 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 199 (391)
T 3dzz_A 168 NPHNPIGYAWSEEEVKRIAELCAKHQVLLISD 199 (391)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCCEEEEe
Confidence 22 345666 78999999999999998764
No 194
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=28.34 E-value=42 Score=33.23 Aligned_cols=90 Identities=8% Similarity=0.067 Sum_probs=52.7
Q ss_pred HHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCc-------Cccc------cccHHHHHHHHHHHhh
Q 011677 344 EHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNL-------WINQ------IGTVTEAIEVVKLAND 409 (479)
Q Consensus 344 ~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i-------k~~~------~Ggitea~~i~~~A~~ 409 (479)
+..+++++.+ +||+... +.+++.++.+++.+ +|+| .+ ...+ ...++...++++.++.
T Consensus 135 ~~i~~i~~~~~~~Vivg~--v~t~e~A~~l~~aG-aD~I------~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~ 205 (361)
T 3khj_A 135 RTLKEIKSKMNIDVIVGN--VVTEEATKELIENG-ADGI------KVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK 205 (361)
T ss_dssp HHHHHHHHHCCCEEEEEE--ECSHHHHHHHHHTT-CSEE------EECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEcc--CCCHHHHHHHHHcC-cCEE------EEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhh
Confidence 4556667776 7766543 34588888887765 6777 43 1111 2345556666677777
Q ss_pred CCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCC
Q 011677 410 VPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 410 ~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~ 445 (479)
.+++++.+.......| . --|+++|+..+-.|..
T Consensus 206 ~~iPVIA~GGI~~~~d-i--~kala~GAd~V~vGs~ 238 (361)
T 3khj_A 206 FGIPIIADGGIRYSGD-I--GKALAVGASSVMIGSI 238 (361)
T ss_dssp HTCCEEEESCCCSHHH-H--HHHHHHTCSEEEESTT
T ss_pred cCCeEEEECCCCCHHH-H--HHHHHcCCCEEEEChh
Confidence 8999877654432222 2 2234445766666654
No 195
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=28.19 E-value=2.3e+02 Score=22.67 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhhCCceeeecCCCccC-HHHHHHHHhhh--hhh--hcCCccccCHHHHHHHhcCCCCceecccCCCC
Q 011677 314 SGEDMIEMYKELCADYPIVSIEDPFDKED-WEHTKSVLQIC--QQV--VGDDLLMSNPKRIERATLIPLAMLFFSRYPSN 388 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iEdP~~~~D-~~g~~~L~~~~--~~I--~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ 388 (479)
+.+++++.+.+ ...|.+..+.--++..| ++-.+++++.. +|| +.+.. +.....+.+..++++.+ .
T Consensus 35 ~~~~a~~~l~~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~---~~~~~~~~~~~g~~~~~------l 104 (151)
T 3kcn_A 35 SGPEALACIKK-SDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ---DLTTAMEAVNEGQVFRF------L 104 (151)
T ss_dssp SHHHHHHHHHH-SCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG---GHHHHHHHHHHTCCSEE------E
T ss_pred CHHHHHHHHHc-CCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC---CHHHHHHHHHcCCeeEE------E
Confidence 56777765533 23367888887776555 34556666654 443 23321 35667777777756666 6
Q ss_pred cCccccccHHHHH
Q 011677 389 LWINQIGTVTEAI 401 (479)
Q Consensus 389 ik~~~~Ggitea~ 401 (479)
.|+....-+..++
T Consensus 105 ~KP~~~~~L~~~i 117 (151)
T 3kcn_A 105 NKPCQMSDIKAAI 117 (151)
T ss_dssp ESSCCHHHHHHHH
T ss_pred cCCCCHHHHHHHH
Confidence 7776554444443
No 196
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=27.93 E-value=48 Score=31.18 Aligned_cols=54 Identities=11% Similarity=0.145 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCCC-------Cch--hHHHHhHhhcCCCCcccCCCCchhH
Q 011677 397 VTEAIEVVKLANDVPWGVVISHRSGE-------TED--SFIADLSVGLASGQIKAGAPCRGER 450 (479)
Q Consensus 397 itea~~i~~~A~~~g~~~~v~h~~ge-------t~d--~~~~dlAv~~~~~~ik~G~~~~~er 450 (479)
+.++.++.+.|+.+|+++++-..... +.+ ...+.+|...|+.|+|++-|..-|.
T Consensus 124 ~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~~~~e~ 186 (263)
T 1w8s_A 124 FEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYTGDPKT 186 (263)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECCSSHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHH
Confidence 45566777778888988776543210 222 2346788888999999997643343
No 197
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=27.18 E-value=99 Score=32.39 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHHHhhCCceeeecCC-----------CccCHHHHHHHHhhh--h--hh-------hcCCccc--cCHH
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIEDPF-----------DKEDWEHTKSVLQIC--Q--QV-------VGDDLLM--SNPK 367 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iEdP~-----------~~~D~~g~~~L~~~~--~--~I-------~gde~~~--t~~~ 367 (479)
.++.++.++++ +.+.+.++.+||=-+ .++|++-+++|++.. + +. +|-..+- -...
T Consensus 43 ~~~tedKl~Ia-~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGAC-ADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGH-HHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHH
Confidence 46778888765 457889999999754 678999999998754 2 21 1211110 0134
Q ss_pred HHHHHhcCCCCceecccCCCCc--CccccccHHHHHHHHHHHhhCCCeEE--EecCCC-CCchhHHHHh---HhhcCCCC
Q 011677 368 RIERATLIPLAMLFFSRYPSNL--WINQIGTVTEAIEVVKLANDVPWGVV--ISHRSG-ETEDSFIADL---SVGLASGQ 439 (479)
Q Consensus 368 ~~~~~i~~~a~d~v~~~~~~~i--k~~~~Ggitea~~i~~~A~~~g~~~~--v~h~~g-et~d~~~~dl---Av~~~~~~ 439 (479)
.++.+.+.+ ++.+ .+ +.+.. ..+.+++++|+++|..+. ++...+ -++..+.+++ +...|+..
T Consensus 122 ~ve~a~~aG-vd~v------rIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~ 191 (539)
T 1rqb_A 122 FVDKSAENG-MDVF------RVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADS 191 (539)
T ss_dssp HHHHHHHTT-CCEE------EECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHhCC-CCEE------EEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 455555554 5655 32 22332 567788899999999873 433222 1234444444 45567877
Q ss_pred cccCC
Q 011677 440 IKAGA 444 (479)
Q Consensus 440 ik~G~ 444 (479)
|.+.+
T Consensus 192 I~L~D 196 (539)
T 1rqb_A 192 IALKD 196 (539)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 75443
No 198
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=27.18 E-value=76 Score=31.44 Aligned_cols=61 Identities=10% Similarity=-0.026 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhCCceeeec--C--CCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 317 DMIEMYKELCADYPIVSIED--P--FDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 317 e~i~~~~~ll~~~~i~~iEd--P--~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
...++..+ +.+.++.+|+= + .+..-++..+++++.. +||+... +.++++.+.+++.+ +|+|
T Consensus 100 ~~~e~~~~-a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~--V~T~e~A~~a~~aG-aD~I 166 (361)
T 3r2g_A 100 NELQRAEA-LRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN--VATYAGADYLASCG-ADII 166 (361)
T ss_dssp HHHHHHHH-HHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE--ECSHHHHHHHHHTT-CSEE
T ss_pred HHHHHHHH-HHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC--cCCHHHHHHHHHcC-CCEE
Confidence 34444444 34445445542 2 2233345677788876 7777654 34589998888775 7888
No 199
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=27.00 E-value=1.2e+02 Score=28.90 Aligned_cols=95 Identities=14% Similarity=0.044 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHH-hhCCceeeecCCCccCHHHHHHHHhhh--hhhh--cCCccccCHHHHHHHhcCCCCceecccCCCCc
Q 011677 315 GEDMIEMYKELC-ADYPIVSIEDPFDKEDWEHTKSVLQIC--QQVV--GDDLLMSNPKRIERATLIPLAMLFFSRYPSNL 389 (479)
Q Consensus 315 ~~e~i~~~~~ll-~~~~i~~iEdP~~~~D~~g~~~L~~~~--~~I~--gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i 389 (479)
..+++......+ ++-+-+.+++|-...-...++....+. +|+- .+..+.-+++.+++.+.. ..++ .+
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v------~i 170 (391)
T 4dq6_A 99 VIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLF------IL 170 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEE------EE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEE------EE
Confidence 456665444444 334577788887654333333332222 4443 223222368899998876 5554 22
Q ss_pred -Cc-cccccH---HHHHHHHHHHhhCCCeEEEe
Q 011677 390 -WI-NQIGTV---TEAIEVVKLANDVPWGVVIS 417 (479)
Q Consensus 390 -k~-~~~Ggi---tea~~i~~~A~~~g~~~~v~ 417 (479)
.+ +-.|.+ .+..+++++|+++|+.+++-
T Consensus 171 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 203 (391)
T 4dq6_A 171 CNPHNPVGRVWTKDELKKLGDICLKHNVKIISD 203 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEee
Confidence 22 235655 78999999999999998763
No 200
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=26.84 E-value=39 Score=34.03 Aligned_cols=66 Identities=8% Similarity=-0.104 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHhhCC------ceeeec--------CCCc--------cCHHHHHHHHhhh-hhhhcCCccccCHHHH
Q 011677 313 KSGEDMIEMYKELCADYP------IVSIED--------PFDK--------EDWEHTKSVLQIC-QQVVGDDLLMSNPKRI 369 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~------i~~iEd--------P~~~--------~D~~g~~~L~~~~-~~I~gde~~~t~~~~~ 369 (479)
++.++.+++ .+.+++.+ +.||+- +..+ .+++-.+++++.+ +||++..-+ +++++
T Consensus 257 ~~~~~~~~l-a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i--~~~~a 333 (402)
T 2hsa_B 257 NPLSLGLAV-VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY--TRELG 333 (402)
T ss_dssp CHHHHHHHH-HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC--CHHHH
T ss_pred CCHHHHHHH-HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC--CHHHH
Confidence 456677765 45678887 777764 1111 1344456788888 887755544 49999
Q ss_pred HHHhcCCCCcee
Q 011677 370 ERATLIPLAMLF 381 (479)
Q Consensus 370 ~~~i~~~a~d~v 381 (479)
+++++.+.+|+|
T Consensus 334 ~~~l~~g~aD~V 345 (402)
T 2hsa_B 334 IEAVAQGDADLV 345 (402)
T ss_dssp HHHHHTTSCSEE
T ss_pred HHHHHCCCCcee
Confidence 999999999999
No 201
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=26.73 E-value=69 Score=30.47 Aligned_cols=121 Identities=11% Similarity=0.032 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhCCc----eeee--cCCCccCHHHHHHHHhhh----hhhhcCCccc--cCHHHHHHHhcCCCCceeccc
Q 011677 317 DMIEMYKELCADYPI----VSIE--DPFDKEDWEHTKSVLQIC----QQVVGDDLLM--SNPKRIERATLIPLAMLFFSR 384 (479)
Q Consensus 317 e~i~~~~~ll~~~~i----~~iE--dP~~~~D~~g~~~L~~~~----~~I~gde~~~--t~~~~~~~~i~~~a~d~v~~~ 384 (479)
+.++.+.++++++++ ..|| +-..-+|.+...+.-+++ +.|+-||.-. ++...+..+ ..|.|
T Consensus 130 ~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~l----~~d~i--- 202 (294)
T 2r6o_A 130 HLTRAVDRALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQL----PFHGL--- 202 (294)
T ss_dssp HHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGCCHHHHHHHHHHHHHTCEEEEEEETSSCBCHHHHHHS----CCCEE---
T ss_pred HHHHHHHHHHHHcCCCcCEEEEEEeCCchhhChHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHhC----CCCEE---
Confidence 445555566666653 3344 222223333333333333 8888888421 244444443 47888
Q ss_pred CCCCcCccccccHH-------HHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCc---ccCCCCchhHH
Q 011677 385 YPSNLWINQIGTVT-------EAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQI---KAGAPCRGERL 451 (479)
Q Consensus 385 ~~~~ik~~~~Ggit-------ea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~i---k~G~~~~~er~ 451 (479)
-|+-+-+-++. -...++.+|+..|+.+++-+ -||.. -.++...+|+.++ ..+-|...+..
T Consensus 203 ---KID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG--VEt~~--q~~~l~~lG~d~~QGy~~~~P~~~~~~ 272 (294)
T 2r6o_A 203 ---KIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG--IETAQ--QYAFLRDRGCEFGQGNLMSTPQAADAF 272 (294)
T ss_dssp ---EECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC--CCSHH--HHHHHHHTTCCEECSTTTCCCEEHHHH
T ss_pred ---EECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec--CCcHH--HHHHHHHcCCCEEEcCccCCCCCHHHH
Confidence 77754443332 24457889999999986644 24433 2444445555444 24556555544
No 202
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=26.45 E-value=2.5e+02 Score=26.49 Aligned_cols=127 Identities=16% Similarity=0.069 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHhhCCceeee---cCCCc----cCH-HHHHHHHhhh--hhhh--------cCCccccC---HHHHHH
Q 011677 313 KSGEDMIEMYKELCADYPIVSIE---DPFDK----EDW-EHTKSVLQIC--QQVV--------GDDLLMSN---PKRIER 371 (479)
Q Consensus 313 ~t~~e~i~~~~~ll~~~~i~~iE---dP~~~----~D~-~g~~~L~~~~--~~I~--------gde~~~t~---~~~~~~ 371 (479)
.|.+++.+.+.+ +...+...|| |-|.. +++ +..+.||+.+ +||. |+....+. .+-++.
T Consensus 49 ~~~~e~~~~~~~-~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~ 127 (276)
T 3o1n_A 49 KTITDVKSEALA-YREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRA 127 (276)
T ss_dssp SSHHHHHHHHHH-HTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHH
Confidence 367787766555 3334433333 55542 222 3445666654 5533 33321111 334445
Q ss_pred HhcCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEec-CCCCCch--h--HHHHhHhhcCCCCcccCCCC
Q 011677 372 ATLIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISH-RSGETED--S--FIADLSVGLASGQIKAGAPC 446 (479)
Q Consensus 372 ~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h-~~get~d--~--~~~dlAv~~~~~~ik~G~~~ 446 (479)
+++.+.+|+| =+.+..- -....++.+.|++.|.++++|+ ....|.. . ....-+..+|+..+|.-...
T Consensus 128 ~l~~g~~dyI------DvEl~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~a 199 (276)
T 3o1n_A 128 AVDSGLVDMI------DLELFTG--DDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMP 199 (276)
T ss_dssp HHHHTCCSEE------EEEGGGC--HHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred HHhcCCCCEE------EEECcCC--HHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 5666778999 7776542 2345567778899999998875 4444422 2 33344566788888875554
Q ss_pred ch
Q 011677 447 RG 448 (479)
Q Consensus 447 ~~ 448 (479)
.+
T Consensus 200 ~s 201 (276)
T 3o1n_A 200 QT 201 (276)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 203
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=25.89 E-value=3.3e+02 Score=23.77 Aligned_cols=107 Identities=11% Similarity=0.124 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHhhCCceeee--cCCCccCHHHHHHHHhhh-hhh-hcCCccccCHHHHHHHhcCCCCceecccCCCCc
Q 011677 314 SGEDMIEMYKELCADYPIVSIE--DPFDKEDWEHTKSVLQIC-QQV-VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNL 389 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iE--dP~~~~D~~g~~~L~~~~-~~I-~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i 389 (479)
+.+++.+.... +.+.++.||| ++ .++..+..+++++.+ +++ +|... +.+.+++..+++.+ +|.| .+
T Consensus 17 d~~~~~~~~~~-~~~~G~~~i~l~~~-~~~~~~~i~~i~~~~~~~l~vg~g~-~~~~~~i~~a~~~G-ad~V------~~ 86 (212)
T 2v82_A 17 TPDEALAHVGA-VIDAGFDAVEIPLN-SPQWEQSIPAIVDAYGDKALIGAGT-VLKPEQVDALARMG-CQLI------VT 86 (212)
T ss_dssp CHHHHHHHHHH-HHHHTCCEEEEETT-STTHHHHHHHHHHHHTTTSEEEEEC-CCSHHHHHHHHHTT-CCEE------EC
T ss_pred CHHHHHHHHHH-HHHCCCCEEEEeCC-ChhHHHHHHHHHHhCCCCeEEEecc-ccCHHHHHHHHHcC-CCEE------Ee
Confidence 55677766555 3455666665 33 233455666777766 553 34432 34577888887776 6777 32
Q ss_pred CccccccHHHHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCccc
Q 011677 390 WINQIGTVTEAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKA 442 (479)
Q Consensus 390 k~~~~Ggitea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~ 442 (479)
|.. ..++.+.++..|..++++.. |... +--|...++.++++
T Consensus 87 -----~~~--~~~~~~~~~~~g~~~~~g~~---t~~e--~~~a~~~G~d~v~v 127 (212)
T 2v82_A 87 -----PNI--HSEVIRRAVGYGMTVCPGCA---TATE--AFTALEAGAQALKI 127 (212)
T ss_dssp -----SSC--CHHHHHHHHHTTCEEECEEC---SHHH--HHHHHHTTCSEEEE
T ss_pred -----CCC--CHHHHHHHHHcCCCEEeecC---CHHH--HHHHHHCCCCEEEE
Confidence 211 12455667788888776632 2111 23344556776664
No 204
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=25.67 E-value=1.7e+02 Score=31.54 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=30.8
Q ss_pred CHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 342 DWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 342 D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
+++--+++++.+ +||++-..+ ++++++.++++.+.+|.|
T Consensus 279 ~~~~~~~i~~~~~~pvi~~G~i-~~~~~a~~~l~~g~aD~V 318 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVLGVGRY-TDPEKMIEIVTKGYADII 318 (729)
T ss_dssp THHHHHHHHTTCSSCEECCSCC-CCHHHHHHHHHTTSCSBE
T ss_pred cHHHHHHHHHHCCCEEEEeCCC-CCHHHHHHHHHCCCCCEE
Confidence 455567788888 997766544 459999999999999988
No 205
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=25.57 E-value=20 Score=36.96 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=55.4
Q ss_pred HHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCc-----------c--ccccHHHHHHHHHHHhh
Q 011677 344 EHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWI-----------N--QIGTVTEAIEVVKLAND 409 (479)
Q Consensus 344 ~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~-----------~--~~Ggitea~~i~~~A~~ 409 (479)
+..++|++.. +|+++.+.. +++..+.++ .+|.| .+-. . -...++....+.+++++
T Consensus 258 ~~I~~l~~~~~vpvi~k~v~--~~~~a~~l~---G~d~v------~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~ 326 (486)
T 2cu0_A 258 KSMKEMRQKVDADFIVGNIA--NPKAVDDLT---FADAV------KVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQE 326 (486)
T ss_dssp HHHHHHHHTCCSEEEEEEEC--CHHHHTTCT---TSSEE------EECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCccccCCcC--CHHHHHHhh---CCCeE------EEeeeeccceeeeEEeecCcchHHHHHHHHHHHHH
Confidence 4456677777 888887753 477776665 57777 4411 0 02245556666677777
Q ss_pred CCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCCC
Q 011677 410 VPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAPC 446 (479)
Q Consensus 410 ~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~~ 446 (479)
.+++++.+....... .... |+++||..+..|.+.
T Consensus 327 ~~vpVia~GGi~~~~-di~k--alalGA~~v~~g~~~ 360 (486)
T 2cu0_A 327 YGLYVIADGGIRYSG-DIVK--AIAAGADAVMLGNLL 360 (486)
T ss_dssp HTCEEEEESCCCSHH-HHHH--HHHTTCSEEEESTTT
T ss_pred cCCcEEecCCCCCHH-HHHH--HHHcCCCceeeChhh
Confidence 899987765443332 2233 445788889888874
No 206
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=23.61 E-value=1.8e+02 Score=27.93 Aligned_cols=115 Identities=15% Similarity=0.075 Sum_probs=61.0
Q ss_pred CCCHHHHHHHHHHHHhhCCce--ee---ecCCCccCHH----HHHHHHhhh-hhhhcCCccccCHHHHHHHhcCCCCcee
Q 011677 312 FKSGEDMIEMYKELCADYPIV--SI---EDPFDKEDWE----HTKSVLQIC-QQVVGDDLLMSNPKRIERATLIPLAMLF 381 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~--~i---EdP~~~~D~~----g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~a~d~v 381 (479)
.++.+|+++.... +.+.++. .| |+|+...+.+ -.+.+++.. +.+...-- ..+.+.++.+.+.+ ++.+
T Consensus 90 ~ls~eei~~~~~~-~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g-~~~~e~l~~L~~aG-~~~i 166 (350)
T 3t7v_A 90 RLTMEEIKETCKT-LKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPG-LMDNATLLKAREKG-ANFL 166 (350)
T ss_dssp BCCHHHHHHHHHH-HTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECS-SCCHHHHHHHHHTT-EEEE
T ss_pred eCCHHHHHHHHHH-HHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCC-CCCHHHHHHHHHcC-CCEE
Confidence 3588999887655 4555532 22 5675321222 333444443 33321110 12467777776655 5554
Q ss_pred c----ccCCC-CcCccccccHHHHHHHHHHHhhCCCeEE----EecCCCCCchhHHHHh
Q 011677 382 F----SRYPS-NLWINQIGTVTEAIEVVKLANDVPWGVV----ISHRSGETEDSFIADL 431 (479)
Q Consensus 382 ~----~~~~~-~ik~~~~Ggitea~~i~~~A~~~g~~~~----v~h~~get~d~~~~dl 431 (479)
. +..+. .-++++-.+..+++++++.|++.|+.+. +|+ +||...+.-++
T Consensus 167 ~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~e~~~~~l 223 (350)
T 3t7v_A 167 ALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV--GNDIESTILSL 223 (350)
T ss_dssp ECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS--SCCHHHHHHHH
T ss_pred EEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec--CCCHHHHHHHH
Confidence 1 00000 0011234678999999999999999853 444 78766544443
No 207
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.37 E-value=1.9e+02 Score=27.15 Aligned_cols=112 Identities=10% Similarity=0.038 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHhhCCceeee---cCCCccCHHHHHH----HHhhh-hhhhcCCccccCHHHHHHHhcC-CCCceeccc
Q 011677 314 SGEDMIEMYKELCADYPIVSIE---DPFDKEDWEHTKS----VLQIC-QQVVGDDLLMSNPKRIERATLI-PLAMLFFSR 384 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~i~~iE---dP~~~~D~~g~~~----L~~~~-~~I~gde~~~t~~~~~~~~i~~-~a~d~v~~~ 384 (479)
+.+++++...+++ +.+-.+|- ++-.+++++.... |++.+ +||+-|-. +++-++.+++. ...++|
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~---~~~v~~aal~a~~Ga~iI--- 104 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDST---NPDAIEAGLKVHRGHAMI--- 104 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECS---CHHHHHHHHHHCCSCCEE---
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCC---CHHHHHHHHHhCCCCCEE---
Confidence 5577777666655 44433221 2223345555543 44444 78888853 58888888876 135666
Q ss_pred CCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC--CCCCch--------hHHHHhHhhcCCC
Q 011677 385 YPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR--SGETED--------SFIADLSVGLASG 438 (479)
Q Consensus 385 ~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~--~get~d--------~~~~dlAv~~~~~ 438 (479)
| .-.|+-...-+++.++.++|.++++-|+ .|...+ .-..+.|...|.+
T Consensus 105 ---N---dvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 105 ---N---STSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIP 162 (271)
T ss_dssp ---E---EECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ---E---ECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 2 1122322245788889999999999997 333221 1345566665554
No 208
>2m1l_A Cyclin-dependent kinase 2-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Homo sapiens}
Probab=23.36 E-value=47 Score=24.55 Aligned_cols=31 Identities=32% Similarity=0.566 Sum_probs=22.0
Q ss_pred cccCCCCchhHHHHhHHHHHHHHHhCCC--ccccC
Q 011677 440 IKAGAPCRGERLAKYNQLLHIEEELGDH--AIYAG 472 (479)
Q Consensus 440 ik~G~~~~~er~~kyn~ll~ie~~l~~~--~~~~~ 472 (479)
+|+|.+.- -..||-+||.+=||+|.. ..|+|
T Consensus 5 ~~~~~~q~--~qsKY~~LL~vIeEmgkdirPTyag 37 (69)
T 2m1l_A 5 MKPPGAQG--SQSTYTDLLSVIEEMGKEIRPTYAG 37 (69)
T ss_dssp CCCSCSSS--SCHHHHHHHHHHHHHHTTHHHHHTT
T ss_pred CCCCCCcc--cHHHHHHHHHHHHHHcccccchhhc
Confidence 46666543 348999999999999763 34555
No 209
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=22.92 E-value=2.8e+02 Score=21.76 Aligned_cols=103 Identities=13% Similarity=0.025 Sum_probs=58.9
Q ss_pred chHHHHHHHHHHHHhcCCCCCceeecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCCc
Q 011677 261 SIREGLDLVKEAINRTGIPSSKWSDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFDK 340 (479)
Q Consensus 261 ~~~~~l~~v~~ai~~~g~~~~~iiD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~~ 340 (479)
++....+.+++.+...|+. +..+ -+.+++++.+...-..+.+..+.--++.
T Consensus 11 d~~~~~~~l~~~l~~~g~~----v~~~-------------------------~~~~~a~~~~~~~~~~~dlvi~d~~l~~ 61 (143)
T 3jte_A 11 DESTILQNIKFLLEIDGNE----VLTA-------------------------SSSTEGLRIFTENCNSIDVVITDMKMPK 61 (143)
T ss_dssp SCHHHHHHHHHHHHHTTCE----EEEE-------------------------SSHHHHHHHHHHTTTTCCEEEEESCCSS
T ss_pred CCHHHHHHHHHHHHhCCce----EEEe-------------------------CCHHHHHHHHHhCCCCCCEEEEeCCCCC
Confidence 3455667777777766654 3331 1456777654321135668888877775
Q ss_pred cC-HHHHHHHHhhh--hhh--hcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHH
Q 011677 341 ED-WEHTKSVLQIC--QQV--VGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIE 402 (479)
Q Consensus 341 ~D-~~g~~~L~~~~--~~I--~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~ 402 (479)
.| ++-.++|++.. +|| +.+.. +.....++++.++.++ ..|+....-+..+++
T Consensus 62 ~~g~~~~~~l~~~~~~~~ii~ls~~~---~~~~~~~~~~~g~~~~-------l~kp~~~~~l~~~l~ 118 (143)
T 3jte_A 62 LSGMDILREIKKITPHMAVIILTGHG---DLDNAILAMKEGAFEY-------LRKPVTAQDLSIAIN 118 (143)
T ss_dssp SCHHHHHHHHHHHCTTCEEEEEECTT---CHHHHHHHHHTTCSEE-------EESSCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHhCCCCeEEEEECCC---CHHHHHHHHHhCccee-------EeCCCCHHHHHHHHH
Confidence 55 35556676654 443 23332 3566777888875555 466655444444443
No 210
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=22.80 E-value=58 Score=31.74 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=53.0
Q ss_pred CCCCHHHHHHHHHHHHhhC-Cceeee-------cCCC-ccCHHHH----HHHHhhh--hhhhcCCccccCHHHHHHHhcC
Q 011677 311 NFKSGEDMIEMYKELCADY-PIVSIE-------DPFD-KEDWEHT----KSVLQIC--QQVVGDDLLMSNPKRIERATLI 375 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~-~i~~iE-------dP~~-~~D~~g~----~~L~~~~--~~I~gde~~~t~~~~~~~~i~~ 375 (479)
.+.+.+++++...+++++- .|.=|= +|++ +++++-. +.|++.+ +||+-|-. +++-++.+++.
T Consensus 60 ~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~---~~~VaeaAl~a 136 (318)
T 2vp8_A 60 ATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTW---RAQVAKAACAA 136 (318)
T ss_dssp ----CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECS---CHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCC---CHHHHHHHHHh
Confidence 4446678887766766542 222121 4555 2333332 4444443 67777752 58888888887
Q ss_pred CCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecCCCC
Q 011677 376 PLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHRSGE 422 (479)
Q Consensus 376 ~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~~ge 422 (479)
+ +++| |-+.|.. --+++.++.++|.++++-|+.|.
T Consensus 137 G-a~iI----------NDVsg~~-d~~m~~vaa~~g~~vVlmh~~G~ 171 (318)
T 2vp8_A 137 G-ADLI----------NDTWGGV-DPAMPEVAAEFGAGLVCAHTGGA 171 (318)
T ss_dssp T-CCEE----------EETTSSS-STTHHHHHHHHTCEEEEECC---
T ss_pred C-CCEE----------EECCCCC-chHHHHHHHHhCCCEEEECCCCC
Confidence 5 5666 2222222 23677888999999999997644
No 211
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=22.39 E-value=5e+02 Score=24.87 Aligned_cols=139 Identities=12% Similarity=0.011 Sum_probs=73.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCceeeecCCC--cc----------CHHHHHHHHhhh---hhhh--cCCccccCHHHHHHHh
Q 011677 311 NFKSGEDMIEMYKELCADYPIVSIEDPFD--KE----------DWEHTKSVLQIC---QQVV--GDDLLMSNPKRIERAT 373 (479)
Q Consensus 311 ~~~t~~e~i~~~~~ll~~~~i~~iEdP~~--~~----------D~~g~~~L~~~~---~~I~--gde~~~t~~~~~~~~i 373 (479)
..++.++.+++.. .+++.++.+||=-++ +. +++-++.+++.- ++.. +-..+..+..++....
T Consensus 19 ~~~~~~~k~~ia~-~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~ 97 (320)
T 3dxi_A 19 WDFNSKIVDAYIL-AMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPI 97 (320)
T ss_dssp TCCCHHHHHHHHH-HHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGG
T ss_pred CcCCHHHHHHHHH-HHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhh
Confidence 3678999998765 578899999997642 22 266777776522 2221 2221111233333333
Q ss_pred cCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC--CCCCchhHHHHhHh--hcCCCCcccCCCCchh
Q 011677 374 LIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR--SGETEDSFIADLSV--GLASGQIKAGAPCRGE 449 (479)
Q Consensus 374 ~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~--~get~d~~~~dlAv--~~~~~~ik~G~~~~~e 449 (479)
. ..+|.+ .+-. .+--+.++.++++.|+++|+.+...-+ ++-+........+. ..|+..+.+.+..+.-
T Consensus 98 ~-~Gvd~~------ri~~-~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~G~~~i~l~Dt~G~~ 169 (320)
T 3dxi_A 98 I-GLVDMI------RIAI-DPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIADLFCMVDSFGGI 169 (320)
T ss_dssp T-TTCSEE------EEEE-CGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTCSEEEEECTTSCC
T ss_pred h-cCCCEE------EEEe-cHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHhhCCCCEEEECcccCCC
Confidence 3 446766 3322 112388899999999999999765432 22222211222322 3466677655544333
Q ss_pred HHHHhHHHH
Q 011677 450 RLAKYNQLL 458 (479)
Q Consensus 450 r~~kyn~ll 458 (479)
.-..+-+|+
T Consensus 170 ~P~~~~~lv 178 (320)
T 3dxi_A 170 TPKEVKNLL 178 (320)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 333333343
No 212
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.28 E-value=2.5e+02 Score=26.90 Aligned_cols=55 Identities=16% Similarity=0.076 Sum_probs=39.2
Q ss_pred hhh-hhhhcCCccccCHHHHHHHhc--CCCCceecccCCCCcCccccccH---HHHHHHHHHHhhCCCeEEEecC
Q 011677 351 QIC-QQVVGDDLLMSNPKRIERATL--IPLAMLFFSRYPSNLWINQIGTV---TEAIEVVKLANDVPWGVVISHR 419 (479)
Q Consensus 351 ~~~-~~I~gde~~~t~~~~~~~~i~--~~a~d~v~~~~~~~ik~~~~Ggi---tea~~i~~~A~~~g~~~~v~h~ 419 (479)
+.. +||+-|-. +++-++.+++ .+ .++| |-+.+. .+..+++.++.++|..+++-|+
T Consensus 81 ~~~~vpisIDT~---~~~V~eaaL~~~~G-a~iI----------NdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 81 EIARVPVMIDSS---KWEVIEAGLKCLQG-KSIV----------NSISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HHHTSCEEEECS---CHHHHHHHHHHCSS-CCEE----------EEECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred hcCCCeEEEeCC---CHHHHHHHHHhcCC-CCEE----------EeCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 345 88888863 5888888887 44 4565 333333 2445788999999999999997
No 213
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=21.93 E-value=79 Score=31.08 Aligned_cols=96 Identities=13% Similarity=0.028 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhhC-CceeeecCCCccCHHHHHHHHhhh--hhhh-cCCccccCHHHHHHHhcCCCCceecccCCCCc-
Q 011677 315 GEDMIEMYKELCADY-PIVSIEDPFDKEDWEHTKSVLQIC--QQVV-GDDLLMSNPKRIERATLIPLAMLFFSRYPSNL- 389 (479)
Q Consensus 315 ~~e~i~~~~~ll~~~-~i~~iEdP~~~~D~~g~~~L~~~~--~~I~-gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~i- 389 (479)
..+++....+.+-+. +-+.+++|....-......+.... +|+. .+..+.-+++.+++.+....+.+| .+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~v------il~ 201 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIY------LLC 201 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEE------EEE
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEE------EEC
Confidence 456665555544333 367788887654333333322222 4543 333233468899998873334454 32
Q ss_pred Cc-cccccH---HHHHHHHHHHhhCCCeEEE
Q 011677 390 WI-NQIGTV---TEAIEVVKLANDVPWGVVI 416 (479)
Q Consensus 390 k~-~~~Ggi---tea~~i~~~A~~~g~~~~v 416 (479)
.+ +-.|.+ .+..+++++|+++|+.+++
T Consensus 202 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 202 SPHNPGGRVWDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 22 334545 6899999999999998765
No 214
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.79 E-value=1.7e+02 Score=28.15 Aligned_cols=97 Identities=13% Similarity=0.030 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHH-----hhCCceeeecCCCccCHHHHHHHHhhh----hhhhcCCccccCHHHHHHHhcCCCCceecccC
Q 011677 315 GEDMIEMYKELC-----ADYPIVSIEDPFDKEDWEHTKSVLQIC----QQVVGDDLLMSNPKRIERATLIPLAMLFFSRY 385 (479)
Q Consensus 315 ~~e~i~~~~~ll-----~~~~i~~iEdP~~~~D~~g~~~L~~~~----~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~ 385 (479)
..+++......+ .+-+-+.+.+|-.......|..+.+.. +.+--|+...-+++.+++.+..+ ..+|
T Consensus 99 ~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v---- 173 (420)
T 1t3i_A 99 ATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK-TKLV---- 173 (420)
T ss_dssp HHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT-EEEE----
T ss_pred hHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCC-ceEE----
Confidence 455555544443 333467889998877755566554433 22222332334588898888654 4455
Q ss_pred CCCcCc--cccccHHHHHHHHHHHhhCCCeEEEec
Q 011677 386 PSNLWI--NQIGTVTEAIEVVKLANDVPWGVVISH 418 (479)
Q Consensus 386 ~~~ik~--~~~Ggitea~~i~~~A~~~g~~~~v~h 418 (479)
.+.. +-.|.+....+++++|+++|+.+++-.
T Consensus 174 --~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 206 (420)
T 1t3i_A 174 --TVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDA 206 (420)
T ss_dssp --EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEEC
T ss_pred --EEeCCcccccCcCCHHHHHHHHHHcCCEEEEEh
Confidence 3332 225777778889999999999887643
No 215
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=21.47 E-value=1e+02 Score=29.38 Aligned_cols=84 Identities=10% Similarity=-0.027 Sum_probs=50.8
Q ss_pred CCceeeecCCCccCHHHHHHHHhhhhhhhcCCccccCHHHHHHHhcC-CCCceecccCCCCcCc-cccccHHHHHHHHHH
Q 011677 329 YPIVSIEDPFDKEDWEHTKSVLQICQQVVGDDLLMSNPKRIERATLI-PLAMLFFSRYPSNLWI-NQIGTVTEAIEVVKL 406 (479)
Q Consensus 329 ~~i~~iEdP~~~~D~~g~~~L~~~~~~I~gde~~~t~~~~~~~~i~~-~a~d~v~~~~~~~ik~-~~~Ggitea~~i~~~ 406 (479)
-+.+.+.+|-...-....+.+-..++.+--|+...-+++.+++.+.. +..-++ ...+ +-.|.+.+..++.++
T Consensus 123 gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~------~~~~~nptG~~~~l~~i~~l 196 (397)
T 3f9t_A 123 HPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGII------GIAGTTELGTIDNIEELSKI 196 (397)
T ss_dssp SCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEE------EEBSCTTTCCBCCHHHHHHH
T ss_pred CeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEE------EECCCCCCCCCCCHHHHHHH
Confidence 35888999977653333332222222222233333468999998876 433233 2222 556777888899999
Q ss_pred HhhCCCeEEEec
Q 011677 407 ANDVPWGVVISH 418 (479)
Q Consensus 407 A~~~g~~~~v~h 418 (479)
|+++|+.+++-.
T Consensus 197 ~~~~~~~li~De 208 (397)
T 3f9t_A 197 AKENNIYIHVDA 208 (397)
T ss_dssp HHHHTCEEEEEC
T ss_pred HHHhCCeEEEEc
Confidence 999999887643
No 216
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=21.33 E-value=1.6e+02 Score=28.52 Aligned_cols=107 Identities=8% Similarity=0.006 Sum_probs=56.8
Q ss_pred HhhCC--ceeeec-C---CCccCHHHHHHHHhhh--hhhhcCCccccCHHHHHHHhcCCCCceecccCCCCcCccccc--
Q 011677 326 CADYP--IVSIED-P---FDKEDWEHTKSVLQIC--QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIG-- 395 (479)
Q Consensus 326 l~~~~--i~~iEd-P---~~~~D~~g~~~L~~~~--~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~G-- 395 (479)
+.+.+ +.|||= . .+...++..+++++.+ .+|+.+. +.++++.+.+++.+ +|+| .+-. .-|
T Consensus 114 ~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~--v~s~e~A~~a~~aG-ad~I------vvs~-hgG~~ 183 (336)
T 1ypf_A 114 LAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGN--VGTPEAVRELENAG-ADAT------KVGI-GPGKV 183 (336)
T ss_dssp HHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHHHHT-CSEE------EECS-SCSTT
T ss_pred HHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECC--cCCHHHHHHHHHcC-CCEE------EEec-CCCce
Confidence 34444 667651 1 2234456677777776 4555442 35689888888776 6776 4411 111
Q ss_pred ---------cHH--HHHHHHHHHhhCCCeEEEecCCCCCchhHHHHhHhhcCCCCcccCCC
Q 011677 396 ---------TVT--EAIEVVKLANDVPWGVVISHRSGETEDSFIADLSVGLASGQIKAGAP 445 (479)
Q Consensus 396 ---------git--ea~~i~~~A~~~g~~~~v~h~~get~d~~~~dlAv~~~~~~ik~G~~ 445 (479)
+.. .+.-+.+++++.+++++.+...... .+...-| ++|+..+-.|.+
T Consensus 184 ~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g-~Dv~kal--alGAdaV~iGr~ 241 (336)
T 1ypf_A 184 CITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTN-GDVAKSI--RFGATMVMIGSL 241 (336)
T ss_dssp CHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCST-HHHHHHH--HTTCSEEEESGG
T ss_pred eecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCH-HHHHHHH--HcCCCEEEeChh
Confidence 000 1223444566668998775544322 2333333 345666666654
No 217
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=21.05 E-value=67 Score=31.78 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHh-hCCceeeecCCCccCHHHHHHHHhhh------hhhhcCCccccCHHHHHHHhcCCCCceecccCC
Q 011677 314 SGEDMIEMYKELCA-DYPIVSIEDPFDKEDWEHTKSVLQIC------QQVVGDDLLMSNPKRIERATLIPLAMLFFSRYP 386 (479)
Q Consensus 314 t~~e~i~~~~~ll~-~~~i~~iEdP~~~~D~~g~~~L~~~~------~~I~gde~~~t~~~~~~~~i~~~a~d~v~~~~~ 386 (479)
+..++++...+.+- +-+-+++++|-.. +|..+.+.. +|..-++.+.-+++.+++.+..+..-++
T Consensus 126 g~t~al~~~~~~l~~~gd~vl~~~p~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~----- 196 (427)
T 3dyd_A 126 GCSQAIDLCLAVLANPGQNILVPRPGFS----LYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLI----- 196 (427)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEEESCCT----HHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEE-----
T ss_pred CcHHHHHHHHHHhcCCCCEEEEcCCCch----hHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEE-----
Confidence 34666665555443 3457889999654 344443333 3332212222358888887766533344
Q ss_pred CCcCc-cccccH---HHHHHHHHHHhhCCCeEEEec
Q 011677 387 SNLWI-NQIGTV---TEAIEVVKLANDVPWGVVISH 418 (479)
Q Consensus 387 ~~ik~-~~~Ggi---tea~~i~~~A~~~g~~~~v~h 418 (479)
...+ |-.|.+ .++.+++++|+++|+.+++--
T Consensus 197 -i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~De 231 (427)
T 3dyd_A 197 -VNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE 231 (427)
T ss_dssp -EESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred -EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEc
Confidence 3333 234443 348999999999999887643
No 218
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=20.86 E-value=3.5e+02 Score=24.66 Aligned_cols=128 Identities=13% Similarity=0.036 Sum_probs=67.8
Q ss_pred CHHHHHHHHHHHHhhCC---ceeeecCCCccCHHHHH----HHHhhh--hhhh--------cCCccccC---HHHHHHHh
Q 011677 314 SGEDMIEMYKELCADYP---IVSIEDPFDKEDWEHTK----SVLQIC--QQVV--------GDDLLMSN---PKRIERAT 373 (479)
Q Consensus 314 t~~e~i~~~~~ll~~~~---i~~iEdP~~~~D~~g~~----~L~~~~--~~I~--------gde~~~t~---~~~~~~~i 373 (479)
|.++++....+ +.+.+ +.|=-|-|...|.+... .|++.+ +||. |+....+. .+-++.++
T Consensus 15 ~~~e~~~~~~~-~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~ 93 (238)
T 1sfl_A 15 SIEETLIQKIN-HRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLA 93 (238)
T ss_dssp ---CHHHHHHH-HTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHGG
T ss_pred CHHHHHHHHHH-hhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHHH
Confidence 55666554444 23333 44444666544544433 344433 4543 33221111 33455566
Q ss_pred cCCCCceecccCCCCcCccccccHHHHHHHHHHHhhCCCeEEEecC-CCCCc--h--hHHHHhHhhcCCCCcccCCCCch
Q 011677 374 LIPLAMLFFSRYPSNLWINQIGTVTEAIEVVKLANDVPWGVVISHR-SGETE--D--SFIADLSVGLASGQIKAGAPCRG 448 (479)
Q Consensus 374 ~~~a~d~v~~~~~~~ik~~~~Ggitea~~i~~~A~~~g~~~~v~h~-~get~--d--~~~~dlAv~~~~~~ik~G~~~~~ 448 (479)
+.+.+|+| =+.+...-.-....++.+.+++.|.++++|+. ...|. + -....=+..+|+..+|.-....+
T Consensus 94 ~~~~~d~i------DvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~~ 167 (238)
T 1sfl_A 94 NINGIDMI------DIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHN 167 (238)
T ss_dssp GCTTCCEE------EEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCSS
T ss_pred HhCCCCEE------EEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 77789999 77765421233455677888999999988864 33342 1 23344456678888887665443
No 219
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=20.65 E-value=2.5e+02 Score=29.94 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHhhCCceeee-------c----C-CC-c-cCHHHHHHHHhhh-hhhhcCCccccCHHHHHHHhcCC
Q 011677 312 FKSGEDMIEMYKELCADYPIVSIE-------D----P-FD-K-EDWEHTKSVLQIC-QQVVGDDLLMSNPKRIERATLIP 376 (479)
Q Consensus 312 ~~t~~e~i~~~~~ll~~~~i~~iE-------d----P-~~-~-~D~~g~~~L~~~~-~~I~gde~~~t~~~~~~~~i~~~ 376 (479)
.++.++.+++. +.+++ .+.+|. + | +. + ..++--+++++.+ +||++--.+ +++++..+.++.+
T Consensus 240 g~~~~~~~~~~-~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i-~~~~~a~~~l~~g 316 (690)
T 3k30_A 240 GITREDIEGVL-RELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRF-TSPDAMVRQIKAG 316 (690)
T ss_dssp SCCHHHHHHHH-HHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCC-CCHHHHHHHHHTT
T ss_pred CCCHHHHHHHH-HHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCC-CCHHHHHHHHHCC
Confidence 56788888764 55676 344432 1 1 11 1 1234445667777 887755433 5699999999999
Q ss_pred CCcee
Q 011677 377 LAMLF 381 (479)
Q Consensus 377 a~d~v 381 (479)
.+|.|
T Consensus 317 ~~d~v 321 (690)
T 3k30_A 317 ILDLI 321 (690)
T ss_dssp SCSEE
T ss_pred CcceE
Confidence 99988
No 220
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.53 E-value=3.3e+02 Score=21.82 Aligned_cols=102 Identities=9% Similarity=0.076 Sum_probs=58.6
Q ss_pred CchHHHHHHHHHHHHhcCCCCCceeecccccccccCceeeccCCCCCCCCCCCCCHHHHHHHHHHHHhhCCceeeecCCC
Q 011677 260 SSIREGLDLVKEAINRTGIPSSKWSDCKSSMHNIYSTKYDLDFKSPNKSGQNFKSGEDMIEMYKELCADYPIVSIEDPFD 339 (479)
Q Consensus 260 ~~~~~~l~~v~~ai~~~g~~~~~iiD~aa~~~~~~~g~Y~~~~~~~~~~~~~~~t~~e~i~~~~~ll~~~~i~~iEdP~~ 339 (479)
+++....+.+++.++..|+. +..+ -+.+++++.+.+ .++.+..+.--++
T Consensus 14 dd~~~~~~~l~~~L~~~g~~----v~~~-------------------------~~~~~al~~l~~--~~~dlii~D~~l~ 62 (154)
T 3gt7_A 14 EDSPTQAEHLKHILEETGYQ----TEHV-------------------------RNGREAVRFLSL--TRPDLIISDVLMP 62 (154)
T ss_dssp CSCHHHHHHHHHHHHTTTCE----EEEE-------------------------SSHHHHHHHHTT--CCCSEEEEESCCS
T ss_pred eCCHHHHHHHHHHHHHCCCE----EEEe-------------------------CCHHHHHHHHHh--CCCCEEEEeCCCC
Confidence 34456677787888766755 4331 145777765422 3456888887777
Q ss_pred ccC-HHHHHHHHhh---h-hhhh--cCCccccCHHHHHHHhcCCCCceecccCCCCcCccccccHHHHHH
Q 011677 340 KED-WEHTKSVLQI---C-QQVV--GDDLLMSNPKRIERATLIPLAMLFFSRYPSNLWINQIGTVTEAIE 402 (479)
Q Consensus 340 ~~D-~~g~~~L~~~---~-~~I~--gde~~~t~~~~~~~~i~~~a~d~v~~~~~~~ik~~~~Ggitea~~ 402 (479)
..| ++-.++|++. - +||+ .+. .+.....++++.++.++ ..|+-...-+..+++
T Consensus 63 ~~~g~~~~~~lr~~~~~~~~pii~~s~~---~~~~~~~~~~~~g~~~~-------l~KP~~~~~l~~~i~ 122 (154)
T 3gt7_A 63 EMDGYALCRWLKGQPDLRTIPVILLTIL---SDPRDVVRSLECGADDF-------ITKPCKDVVLASHVK 122 (154)
T ss_dssp SSCHHHHHHHHHHSTTTTTSCEEEEECC---CSHHHHHHHHHHCCSEE-------EESSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCcCCCCEEEEECC---CChHHHHHHHHCCCCEE-------EeCCCCHHHHHHHHH
Confidence 555 4555666654 2 4432 332 13666777777775555 567765444444433
Done!