Query 011678
Match_columns 479
No_of_seqs 234 out of 2011
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 13:06:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 2.8E-50 9.7E-55 399.5 33.9 431 22-455 6-447 (460)
2 3mkt_A Multi antimicrobial ext 99.8 1.8E-19 6.1E-24 178.1 20.0 206 24-230 234-446 (460)
3 3o7q_A L-fucose-proton symport 70.9 67 0.0023 29.8 33.2 47 27-73 25-73 (438)
4 4aps_A DI-OR tripeptide H+ sym 69.7 77 0.0026 30.0 28.5 21 426-446 447-467 (491)
5 1pw4_A Glycerol-3-phosphate tr 68.5 76 0.0026 29.5 40.1 23 426-448 409-431 (451)
6 2knc_B Integrin beta-3; transm 38.4 89 0.003 21.3 5.7 20 429-448 10-29 (79)
7 2jwa_A Receptor tyrosine-prote 18.8 1.4E+02 0.005 17.6 3.3 7 224-230 32-38 (44)
8 2ks1_B Epidermal growth factor 13.6 2.3E+02 0.0078 16.8 4.4 8 223-230 31-38 (44)
9 2iub_A CORA, divalent cation t 8.7 1.1E+02 0.0039 27.9 1.3 62 393-456 294-362 (363)
10 4hkr_A Calcium release-activat 6.9 9.9E+02 0.034 19.6 14.4 154 10-164 6-169 (214)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=2.8e-50 Score=399.55 Aligned_cols=431 Identities=23% Similarity=0.332 Sum_probs=398.1
Q ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHhhhccccc
Q 011678 22 AFVEELKKLSFLAAPMVGVTVSQYLLPAVSLMMAGHLGELTLASVAIATSFTNVTGIIPLFGFACALETLCGQAYGAKQY 101 (479)
Q Consensus 22 ~~~~~~~~~~~~~~p~~~~~~~~~l~~~i~~~~i~~lg~~~~~~~~~a~~i~~~~~~~~~~gl~~a~~~~~s~~~~~~~~ 101 (479)
..++..|++++.++|.+++++...+.+.+|+.+++|+|++++|+++.+.++..+. ..+..|++.+..+.++|+.|++|+
T Consensus 6 ~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~~ 84 (460)
T 3mkt_A 6 RYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGRQ 84 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCh
Confidence 3468899999999999999999999999999999999999999999999998876 778899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCChhHHHH
Q 011678 102 QQIGTYTYSAMFFCIAICFPISVLWIFMDKVLILLGQDPEIATEACNFSISLIPALLAFAVLRPLIHNLQSQSLILPLFL 181 (479)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (479)
++.++.+++++.+..+.++++.++..+.++++.+++.+++..+.+..|+++..++.++..+.....+.+|+.||++.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 164 (460)
T 3mkt_A 85 HKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMV 164 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 99999999999999999988776677888888888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh----cCCccchhHHHHHHHHHHHHHHHHHHHHhccccccc--ccccchhhHHHHHHHHHHH
Q 011678 182 SACATLCFHILLCWYLVFK----ANFRIVGAALAIGLSYCLNAVILALYMRYSSSCEKT--RVFIFSDIFSCIKEFFSFA 255 (479)
Q Consensus 182 ~~~~~~~~~i~~~~~li~~----~~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 255 (479)
.+++..++|+++++++++. +++|+.|+++++.+++.+..++..++.+++++.++. +.++.+.+++..|++++++
T Consensus 165 ~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (460)
T 3mkt_A 165 IGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLG 244 (460)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHh
Confidence 9999999999999999975 379999999999999999999988888776543221 1223355678899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 011678 256 LPTVVMFCLEWWSFEILILLSGLLPNSKLETSVLSICLTISSTHYFIPYGIGAAASTRVSNELGAGNPQAAQLAACVVMV 335 (479)
Q Consensus 256 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 335 (479)
.|.+++++...+....++.+++.++ ++++++|++++++.++...+..+++++..|.+++++|++|.|+.++..+++.+
T Consensus 245 ~p~~~~~~~~~~~~~~~~~~~~~~g--~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~~ 322 (460)
T 3mkt_A 245 FPVAAALFFEVTLFAVVALLVAPLG--STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLM 322 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999985 77999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhHHHHHHHHHHHhH
Q 011678 336 LAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGI 415 (479)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i 415 (479)
++..++++++++++++++++..+|.+|+++.+.+.+++++++++.++.+++....+++++.||++.+++.++.+.|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i 402 (460)
T 3mkt_A 323 TGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGL 402 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHHHH----hC-CCchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011678 416 PLASVLCFV----LN-LRGKGLWIGIMTGSAVQAIVLAIITVTTN 455 (479)
Q Consensus 416 ~l~~~l~~~----~~-~g~~g~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
|+++++.+. ++ +|..|+|+++.+++++..++..+.++|..
T Consensus 403 ~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~ 447 (460)
T 3mkt_A 403 PTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ 447 (460)
T ss_dssp HHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSC
T ss_pred HHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 66 89999999999999999888766555443
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.83 E-value=1.8e-19 Score=178.11 Aligned_cols=206 Identities=15% Similarity=0.171 Sum_probs=192.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHhhhcccccch
Q 011678 24 VEELKKLSFLAAPMVGVTVSQYLLPAVSLMMAGHLGELTLASVAIATSFTNVTGIIPLFGFACALETLCGQAYGAKQYQQ 103 (479)
Q Consensus 24 ~~~~~~~~~~~~p~~~~~~~~~l~~~i~~~~i~~lg~~~~~~~~~a~~i~~~~~~~~~~gl~~a~~~~~s~~~~~~~~~~ 103 (479)
++..|++++.++|.+++++...+...+|+.+++++|++++|+++.+.++.++. ..+..+++++..|.+++.+|++|+++
T Consensus 234 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~~~~ 312 (460)
T 3mkt_A 234 PKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQDTKG 312 (460)
T ss_dssp TSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 46788999999999999999999999999999999999999999999999998 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCChhHHHHH
Q 011678 104 IGTYTYSAMFFCIAICFPISVL-WIFMDKVLILLGQDPEIATEACNFSISLIPALLAFAVLRPLIHNLQSQSLILPLFLS 182 (479)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 182 (479)
.++..++++.+...++++.+++ ..+.+++..++..+++..+.+..++++..++.++.++.....+.+++.||++.+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 392 (460)
T 3mkt_A 313 AAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHR 392 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 9999999999999999998875 889999999888888888899999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHh----cC-CccchhHHHHHHHHHHHHHHHHHHHHhc
Q 011678 183 ACATL-CFHILLCWYLVFK----AN-FRIVGAALAIGLSYCLNAVILALYMRYS 230 (479)
Q Consensus 183 ~~~~~-~~~i~~~~~li~~----~~-~g~~g~a~a~~i~~~~~~~~~~~~~~~~ 230 (479)
+++.. ++++++++++... ++ +|..|+++++.+++.+..++..+..+|+
T Consensus 393 ~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~ 446 (460)
T 3mkt_A 393 TFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWL 446 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988 9999999999986 67 9999999999999999988876665544
No 3
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=70.87 E-value=67 Score=29.79 Aligned_cols=47 Identities=11% Similarity=0.069 Sum_probs=23.6
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcc--ChHHHHHHHHHHHHH
Q 011678 27 LKKLSFLAAPMVGVTVSQYLLPAVSLMMAGHL--GELTLASVAIATSFT 73 (479)
Q Consensus 27 ~~~~~~~~~p~~~~~~~~~l~~~i~~~~i~~l--g~~~~~~~~~a~~i~ 73 (479)
++.+.....-.++..............+..++ ++.+.+.......+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~ 73 (438)
T 3o7q_A 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFG 73 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34444444445555555455555555555555 455555444443333
No 4
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=69.75 E-value=77 Score=30.03 Aligned_cols=21 Identities=24% Similarity=0.129 Sum_probs=9.6
Q ss_pred CCCchHHHHHHHHHHHHHHHH
Q 011678 426 NLRGKGLWIGIMTGSAVQAIV 446 (479)
Q Consensus 426 ~~g~~g~~~~~~~~~~~~~~~ 446 (479)
+.+....+.......++..+.
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~ 467 (491)
T 4aps_A 447 AKSEVAYFSYFGLGSVVLGIV 467 (491)
T ss_dssp GSSTTHHHHHTHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHH
Confidence 345445554444444444433
No 5
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=68.47 E-value=76 Score=29.50 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=12.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHH
Q 011678 426 NLRGKGLWIGIMTGSAVQAIVLA 448 (479)
Q Consensus 426 ~~g~~g~~~~~~~~~~~~~~~~~ 448 (479)
..|....++...+..++..+...
T Consensus 409 ~~g~~~~~~~~~~~~~~~~~~~~ 431 (451)
T 1pw4_A 409 FFGWDGGFMVMIGGSILAVILLI 431 (451)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHHHH
Confidence 35666666655555555444433
No 6
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=38.42 E-value=89 Score=21.31 Aligned_cols=20 Identities=5% Similarity=-0.012 Sum_probs=9.3
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 011678 429 GKGLWIGIMTGSAVQAIVLA 448 (479)
Q Consensus 429 ~~g~~~~~~~~~~~~~~~~~ 448 (479)
+.++..+...+.++..++.+
T Consensus 10 ~~~Iv~gvi~gilliGllll 29 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAAL 29 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHH
Confidence 44444555555444444433
No 7
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=18.81 E-value=1.4e+02 Score=17.62 Aligned_cols=7 Identities=0% Similarity=0.311 Sum_probs=3.2
Q ss_pred HHHHHhc
Q 011678 224 ALYMRYS 230 (479)
Q Consensus 224 ~~~~~~~ 230 (479)
..+++|+
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 3445544
No 8
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=13.57 E-value=2.3e+02 Score=16.76 Aligned_cols=8 Identities=38% Similarity=0.808 Sum_probs=3.3
Q ss_pred HHHHHHhc
Q 011678 223 LALYMRYS 230 (479)
Q Consensus 223 ~~~~~~~~ 230 (479)
.+++++++
T Consensus 31 ~~~~~RRr 38 (44)
T 2ks1_B 31 IGLFMRRR 38 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33444443
No 9
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=8.72 E-value=1.1e+02 Score=27.91 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=0.0
Q ss_pred HhccCccchhHHHHHHHHHHHhHHHHHHHHHH-------hCCCchHHHHHHHHHHHHHHHHHHHHHhhcCH
Q 011678 393 ARGTGWQHIGAYVNLGAYYIVGIPLASVLCFV-------LNLRGKGLWIGIMTGSAVQAIVLAIITVTTNW 456 (479)
Q Consensus 393 l~~~g~~~~~~~~~~~~~~~~~i~l~~~l~~~-------~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
..+.......-.+++++ ++.+|+.++-+.+ +..+-...++...+..++..+..+++++|++|
T Consensus 294 ~is~~~N~imk~LTiit--~IflP~T~IaGiyGMNf~~mPel~~~~Gy~~~l~~m~~i~~~~~~~Fkrk~W 362 (363)
T 2iub_A 294 SVSNKTNEVMKVLTIIA--TIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLAVMGVIAVIMVVYFKKKKW 362 (363)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHHHHHHHTTSCC--------------CHHHHHHHHHHHHHHHTTTTSCC-
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhcccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHccc
No 10
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=6.94 E-value=9.9e+02 Score=19.59 Aligned_cols=154 Identities=8% Similarity=-0.063 Sum_probs=0.0
Q ss_pred cchhhccccchhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHHHhHHHhH
Q 011678 10 REEETKWVVTRGAFVEELKKLSFLAAPMVGVTVSQYLLPAVSLMMAGH-LGELTLASVAIATSFTNVTGIIPLFGFACAL 88 (479)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~i~~~~i~~-lg~~~~~~~~~a~~i~~~~~~~~~~gl~~a~ 88 (479)
.+.++++.-+|++.-..-.++-..+--..+-..+......=-++=... ..+.-+.+|+....+...+ ..+..-+++-.
T Consensus 6 ~~~h~~~~l~~R~l~ls~aqLKA~S~lSALLaGFAMVAmVE~ql~~~~~~p~~LLi~fav~Ttllv~v-ml~AlMIsTcI 84 (214)
T 4hkr_A 6 EDLHSPTYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQLDHDTNVPPGMLIAFAICTTLLVAV-HMLALMISTCI 84 (214)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHH-HHHHHHHHHHT
T ss_pred ccccChhhccHHHHHHHHHHHHHHHHHHHHHhccceeeEEEEeccCCCCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Q ss_pred HHHHHhh--------hcccccchHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCChHHHHHHHHHHHHHHhhHHH
Q 011678 89 ETLCGQA--------YGAKQYQQIGTYTYSAMFFCIAICFPISVL-WIFMDKVLILLGQDPEIATEACNFSISLIPALLA 159 (479)
Q Consensus 89 ~~~~s~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 159 (479)
.|.+-.. ..+.-.++.+.++..+..+++.+|+++.+. +....|+--+=..++.....+...+........|
T Consensus 85 LPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall~WVKF~~~~~~aa~~~t~vliPv~i~F~~F 164 (214)
T 4hkr_A 85 LPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAF 164 (214)
T ss_dssp TTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheEEeecCCcHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHH
Q 011678 160 FAVLR 164 (479)
Q Consensus 160 ~~~~~ 164 (479)
..-.+
T Consensus 165 a~hFY 169 (214)
T 4hkr_A 165 AIHFY 169 (214)
T ss_dssp HHHHH
T ss_pred HHHHH
Done!