Query 011680
Match_columns 479
No_of_seqs 416 out of 2817
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 04:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011680.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011680hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 3.1E-86 6.6E-91 656.4 41.3 424 24-462 8-444 (452)
2 PLN02533 probable purple acid 100.0 1.9E-81 4E-86 644.4 48.2 405 26-457 13-420 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 1E-47 2.2E-52 380.1 32.2 285 159-455 2-294 (294)
4 PTZ00422 glideosome-associated 100.0 3.3E-35 7.2E-40 292.5 28.5 260 158-456 23-330 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 2E-33 4.3E-38 275.6 26.2 247 162-443 1-277 (277)
6 PF09423 PhoD: PhoD-like phosp 100.0 1.2E-29 2.5E-34 265.3 24.1 289 68-364 4-381 (453)
7 COG3540 PhoD Phosphodiesterase 100.0 2.1E-28 4.6E-33 241.7 17.0 295 60-361 36-419 (522)
8 KOG2679 Purple (tartrate-resis 100.0 8.6E-28 1.9E-32 221.2 19.5 270 149-456 33-330 (336)
9 cd07395 MPP_CSTP1 Homo sapiens 100.0 2.1E-27 4.6E-32 231.0 22.8 229 160-438 3-260 (262)
10 cd07402 MPP_GpdQ Enterobacter 99.9 3.2E-24 7E-29 205.8 19.4 217 163-430 1-238 (240)
11 cd07396 MPP_Nbla03831 Homo sap 99.9 4.1E-23 9E-28 201.2 18.9 197 162-397 1-246 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.9 3.7E-22 8.1E-27 195.4 23.6 240 149-443 4-264 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.9 4E-21 8.6E-26 185.8 18.3 191 164-367 2-217 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.8 3.6E-20 7.8E-25 174.4 15.5 150 162-365 1-166 (214)
15 cd00842 MPP_ASMase acid sphing 99.8 2E-18 4.3E-23 171.0 15.0 194 166-363 42-264 (296)
16 cd08163 MPP_Cdc1 Saccharomyces 99.7 2.4E-17 5.3E-22 158.8 15.5 170 179-364 36-232 (257)
17 PF00149 Metallophos: Calcineu 99.7 1.4E-18 3E-23 155.7 6.2 189 162-360 1-200 (200)
18 cd07383 MPP_Dcr2 Saccharomyces 99.7 1E-15 2.2E-20 142.6 16.0 150 161-364 2-180 (199)
19 cd07393 MPP_DR1119 Deinococcus 99.7 1.1E-15 2.4E-20 145.7 16.1 177 164-367 1-212 (232)
20 TIGR03767 P_acnes_RR metalloph 99.7 3E-15 6.5E-20 152.0 18.3 94 267-363 290-395 (496)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.7 1.9E-15 4E-20 139.1 14.9 167 164-361 1-174 (188)
22 TIGR03729 acc_ester putative p 99.6 9.5E-15 2.1E-19 140.1 15.0 176 163-361 1-222 (239)
23 COG1409 Icc Predicted phosphoh 99.6 3.5E-14 7.5E-19 140.1 16.6 179 162-360 1-193 (301)
24 cd07400 MPP_YydB Bacillus subt 99.6 5.5E-14 1.2E-18 123.9 13.4 116 164-363 1-128 (144)
25 cd07385 MPP_YkuE_C Bacillus su 99.6 3.7E-14 8E-19 134.4 13.1 198 161-397 1-206 (223)
26 cd07388 MPP_Tt1561 Thermus the 99.5 4.2E-13 9.2E-18 126.2 16.9 175 161-358 4-189 (224)
27 PF14008 Metallophos_C: Iron/z 99.5 5.2E-14 1.1E-18 104.9 7.0 62 385-451 1-62 (62)
28 TIGR03768 RPA4764 metallophosp 99.5 5.5E-13 1.2E-17 134.2 15.7 93 267-360 291-411 (492)
29 cd07404 MPP_MS158 Microscilla 99.5 2.4E-13 5.2E-18 122.8 10.3 145 164-362 1-151 (166)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.5 7.5E-13 1.6E-17 125.2 13.8 186 163-362 1-203 (223)
31 PRK11340 phosphodiesterase Yae 99.5 1.4E-12 3.1E-17 127.2 15.8 197 159-396 47-253 (271)
32 KOG1432 Predicted DNA repair e 99.5 2.1E-11 4.5E-16 117.2 22.9 255 159-453 51-374 (379)
33 cd00838 MPP_superfamily metall 99.4 7.7E-12 1.7E-16 106.8 12.3 116 165-364 1-119 (131)
34 cd07389 MPP_PhoD Bacillus subt 99.2 9.9E-11 2.1E-15 111.4 11.9 163 163-363 1-207 (228)
35 cd07379 MPP_239FB Homo sapiens 99.2 1.2E-10 2.5E-15 101.6 10.9 116 163-361 1-117 (135)
36 COG1408 Predicted phosphohydro 99.2 4.7E-10 1E-14 109.4 14.2 85 149-239 32-119 (284)
37 cd08166 MPP_Cdc1_like_1 unchar 99.1 1.9E-10 4.2E-15 105.1 9.6 106 187-363 42-150 (195)
38 PF12850 Metallophos_2: Calcin 99.1 5.2E-10 1.1E-14 99.4 12.1 154 162-429 1-155 (156)
39 cd07397 MPP_DevT Myxococcus xa 99.1 3.2E-09 6.9E-14 100.3 15.3 178 162-361 1-209 (238)
40 cd07384 MPP_Cdc1_like Saccharo 99.1 1.2E-09 2.6E-14 99.0 11.1 56 180-238 37-100 (171)
41 PRK05340 UDP-2,3-diacylglucosa 99.0 2.9E-09 6.3E-14 102.2 13.3 177 163-362 2-201 (241)
42 KOG3770 Acid sphingomyelinase 99.0 5E-09 1.1E-13 108.2 14.2 179 178-363 199-407 (577)
43 cd08165 MPP_MPPE1 human MPPE1 99.0 2.3E-09 4.9E-14 95.8 9.9 48 187-237 38-88 (156)
44 PF14582 Metallophos_3: Metall 99.0 4.9E-09 1.1E-13 95.9 11.0 177 161-361 5-219 (255)
45 cd00841 MPP_YfcE Escherichia c 99.0 5.6E-09 1.2E-13 93.0 11.1 56 163-237 1-58 (155)
46 COG2129 Predicted phosphoester 98.9 5.6E-08 1.2E-12 89.4 16.8 176 161-362 3-189 (226)
47 cd08164 MPP_Ted1 Saccharomyces 98.9 6.7E-09 1.4E-13 94.9 7.7 57 179-239 35-112 (193)
48 cd07394 MPP_Vps29 Homo sapiens 98.8 7E-07 1.5E-11 81.5 20.7 166 163-444 1-170 (178)
49 cd00845 MPP_UshA_N_like Escher 98.8 3.6E-08 7.8E-13 95.2 12.9 175 162-362 1-208 (252)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 1.3E-07 2.9E-12 90.1 16.5 73 165-238 2-81 (231)
51 TIGR00583 mre11 DNA repair pro 98.8 2.5E-07 5.4E-12 94.6 18.9 108 312-456 201-308 (405)
52 cd07403 MPP_TTHA0053 Thermus t 98.8 3E-08 6.6E-13 85.6 8.6 50 313-363 57-106 (129)
53 TIGR00040 yfcE phosphoesterase 98.8 1.4E-07 3.1E-12 84.4 13.3 61 162-237 1-63 (158)
54 cd07410 MPP_CpdB_N Escherichia 98.8 4.3E-07 9.3E-12 89.0 17.5 183 162-361 1-231 (277)
55 COG1768 Predicted phosphohydro 98.7 1.8E-07 3.8E-12 82.3 12.8 155 178-364 32-203 (230)
56 cd07406 MPP_CG11883_N Drosophi 98.7 4.3E-07 9.4E-12 88.0 15.5 174 162-361 1-208 (257)
57 PRK09453 phosphodiesterase; Pr 98.7 1.5E-06 3.2E-11 79.7 17.1 74 162-237 1-75 (182)
58 cd07398 MPP_YbbF-LpxH Escheric 98.6 1.4E-07 3E-12 88.9 10.0 184 165-363 1-204 (217)
59 cd07411 MPP_SoxB_N Thermus the 98.6 2.6E-06 5.7E-11 82.9 16.7 156 179-361 41-220 (264)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.5 1.9E-06 4.1E-11 83.3 14.3 182 164-365 1-234 (262)
61 cd07408 MPP_SA0022_N Staphyloc 98.5 2.4E-06 5.2E-11 82.8 12.9 182 162-362 1-215 (257)
62 COG0420 SbcD DNA repair exonuc 98.4 1.3E-06 2.8E-11 90.0 11.4 73 162-238 1-88 (390)
63 cd07412 MPP_YhcR_N Bacillus su 98.4 4E-06 8.6E-11 82.7 14.2 64 297-362 178-243 (288)
64 KOG3662 Cell division control 98.4 1.8E-06 3.9E-11 86.8 11.6 116 159-288 46-183 (410)
65 PHA02546 47 endonuclease subun 98.4 6.6E-06 1.4E-10 83.0 14.1 74 162-238 1-89 (340)
66 cd07409 MPP_CD73_N CD73 ecto-5 98.4 4.6E-06 1E-10 81.9 12.5 156 180-361 41-219 (281)
67 cd07382 MPP_DR1281 Deinococcus 98.3 2.5E-05 5.4E-10 75.2 16.6 169 163-361 1-179 (255)
68 PRK09419 bifunctional 2',3'-cy 98.3 1.2E-05 2.7E-10 93.6 16.0 190 159-361 658-883 (1163)
69 cd07407 MPP_YHR202W_N Saccharo 98.3 8.6E-05 1.9E-09 72.8 18.9 184 160-361 4-232 (282)
70 cd07405 MPP_UshA_N Escherichia 98.2 1.9E-05 4.1E-10 77.7 13.0 187 162-361 1-222 (285)
71 PRK04036 DNA polymerase II sma 98.2 1.9E-05 4.2E-10 83.6 13.6 80 159-238 241-343 (504)
72 TIGR00282 metallophosphoestera 98.2 0.00013 2.8E-09 70.5 17.7 195 162-398 1-204 (266)
73 COG0622 Predicted phosphoester 98.2 0.00011 2.5E-09 66.2 16.1 62 162-237 2-64 (172)
74 TIGR00619 sbcd exonuclease Sbc 98.1 8E-06 1.7E-10 78.9 8.2 73 162-238 1-88 (253)
75 COG0737 UshA 5'-nucleotidase/2 98.1 4.4E-05 9.5E-10 81.6 13.9 188 157-360 22-247 (517)
76 cd07390 MPP_AQ1575 Aquifex aeo 98.1 6.6E-06 1.4E-10 74.4 6.4 62 165-237 2-81 (168)
77 COG2908 Uncharacterized protei 98.1 1E-05 2.3E-10 75.3 7.1 67 166-237 2-79 (237)
78 cd07425 MPP_Shelphs Shewanella 98.0 2.1E-05 4.5E-10 73.7 7.7 63 165-238 1-80 (208)
79 PRK09558 ushA bifunctional UDP 98.0 0.00011 2.4E-09 79.1 14.3 190 159-361 32-258 (551)
80 PRK10966 exonuclease subunit S 97.9 2.7E-05 5.8E-10 80.3 8.6 73 162-238 1-87 (407)
81 TIGR01530 nadN NAD pyrophospha 97.9 0.0003 6.5E-09 75.6 15.0 152 181-361 42-219 (550)
82 cd08162 MPP_PhoA_N Synechococc 97.7 0.00043 9.3E-09 69.0 12.4 39 309-361 206-245 (313)
83 cd07391 MPP_PF1019 Pyrococcus 97.6 7.8E-05 1.7E-09 67.6 5.5 48 186-237 40-87 (172)
84 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00015 3.3E-09 64.0 6.4 62 165-236 1-68 (150)
85 PRK11907 bifunctional 2',3'-cy 97.5 0.0024 5.2E-08 71.0 15.3 59 297-360 296-354 (814)
86 TIGR00024 SbcD_rel_arch putati 97.4 0.0004 8.7E-09 65.7 7.2 69 162-237 15-101 (225)
87 COG4186 Predicted phosphoester 97.4 0.0024 5.3E-08 55.4 11.0 65 163-237 5-85 (186)
88 KOG2863 RNA lariat debranching 97.4 0.00077 1.7E-08 65.9 8.5 176 162-359 1-229 (456)
89 PHA02239 putative protein phos 97.3 0.00046 9.9E-09 65.8 6.9 68 163-237 2-72 (235)
90 PRK09419 bifunctional 2',3'-cy 97.3 0.0034 7.4E-08 73.5 15.2 48 309-361 233-281 (1163)
91 PRK09418 bifunctional 2',3'-cy 97.3 0.0074 1.6E-07 67.0 15.8 47 309-361 243-290 (780)
92 COG1692 Calcineurin-like phosp 97.1 0.081 1.8E-06 49.7 18.8 188 162-392 1-196 (266)
93 cd07386 MPP_DNA_pol_II_small_a 97.1 0.00099 2.2E-08 63.9 6.6 74 165-238 2-94 (243)
94 cd07423 MPP_PrpE Bacillus subt 97.1 0.0011 2.5E-08 63.2 7.0 64 163-237 2-79 (234)
95 cd07424 MPP_PrpA_PrpB PrpA and 97.1 0.0014 3.1E-08 61.2 7.1 60 163-237 2-66 (207)
96 PRK09420 cpdB bifunctional 2', 97.1 0.016 3.4E-07 63.5 16.0 46 309-360 217-263 (649)
97 TIGR01390 CycNucDiestase 2',3' 97.0 0.012 2.6E-07 64.3 14.6 46 309-360 194-240 (626)
98 cd07387 MPP_PolD2_C PolD2 (DNA 97.0 0.018 3.9E-07 55.4 14.0 175 164-363 2-218 (257)
99 PRK00166 apaH diadenosine tetr 97.0 0.002 4.3E-08 62.9 7.0 62 163-237 2-68 (275)
100 PRK13625 bis(5'-nucleosyl)-tet 96.9 0.0025 5.5E-08 61.2 7.3 64 163-237 2-78 (245)
101 cd07381 MPP_CapA CapA and rela 96.9 0.028 6E-07 53.8 14.3 61 297-363 162-222 (239)
102 cd07413 MPP_PA3087 Pseudomonas 96.7 0.0039 8.5E-08 59.0 7.1 63 164-237 1-75 (222)
103 PRK11439 pphA serine/threonine 96.7 0.0043 9.2E-08 58.6 7.0 60 163-237 18-82 (218)
104 smart00854 PGA_cap Bacterial c 96.7 0.028 6.1E-07 53.8 12.6 60 299-364 162-221 (239)
105 PRK09968 serine/threonine-spec 96.6 0.0057 1.2E-07 57.7 7.1 61 162-237 15-80 (218)
106 PF00041 fn3: Fibronectin type 96.4 0.017 3.8E-07 44.8 7.8 70 60-141 2-75 (85)
107 cd07422 MPP_ApaH Escherichia c 96.4 0.0075 1.6E-07 58.2 6.7 60 165-237 2-66 (257)
108 cd07421 MPP_Rhilphs Rhilph pho 96.4 0.0069 1.5E-07 59.0 6.4 67 163-237 3-79 (304)
109 COG1407 Predicted ICC-like pho 96.4 0.0077 1.7E-07 56.6 6.4 72 162-237 20-109 (235)
110 PF13277 YmdB: YmdB-like prote 96.4 0.13 2.9E-06 48.9 14.6 189 165-397 1-198 (253)
111 PF09587 PGA_cap: Bacterial ca 96.2 0.11 2.4E-06 50.0 13.6 64 295-364 169-232 (250)
112 cd00144 MPP_PPP_family phospho 96.1 0.012 2.7E-07 55.4 6.6 62 166-238 2-68 (225)
113 COG5555 Cytolysin, a secreted 96.1 0.0086 1.9E-07 57.0 4.9 175 188-364 127-338 (392)
114 KOG2310 DNA repair exonuclease 95.7 0.031 6.8E-07 57.8 7.6 44 159-202 11-67 (646)
115 KOG3325 Membrane coat complex 95.6 0.14 2.9E-06 44.3 9.9 85 339-455 98-182 (183)
116 TIGR00668 apaH bis(5'-nucleosy 95.6 0.029 6.2E-07 54.5 6.6 65 163-237 2-68 (279)
117 KOG3947 Phosphoesterases [Gene 94.2 1.5 3.2E-05 42.2 13.5 67 158-240 58-128 (305)
118 smart00156 PP2Ac Protein phosp 94.1 0.17 3.6E-06 49.4 7.6 65 163-238 29-99 (271)
119 cd07416 MPP_PP2B PP2B, metallo 94.1 0.15 3.2E-06 50.6 7.2 65 163-238 44-114 (305)
120 cd07420 MPP_RdgC Drosophila me 94.0 0.15 3.3E-06 50.8 7.2 65 163-238 52-123 (321)
121 KOG0196 Tyrosine kinase, EPH ( 93.7 0.21 4.5E-06 54.4 7.7 75 70-155 453-537 (996)
122 KOG4419 5' nucleotidase [Nucle 93.6 0.44 9.5E-06 50.4 9.7 58 293-361 211-270 (602)
123 COG1311 HYS2 Archaeal DNA poly 93.5 0.26 5.7E-06 50.9 7.7 81 158-238 222-321 (481)
124 cd07415 MPP_PP2A_PP4_PP6 PP2A, 93.4 0.22 4.8E-06 48.9 6.9 65 163-238 43-113 (285)
125 cd07418 MPP_PP7 PP7, metalloph 92.8 0.27 5.9E-06 49.9 6.7 65 163-238 67-138 (377)
126 cd07414 MPP_PP1_PPKL PP1, PPKL 92.4 0.36 7.9E-06 47.6 6.9 65 163-238 51-121 (293)
127 cd07417 MPP_PP5_C PP5, C-termi 92.4 0.36 7.7E-06 48.1 6.9 65 162-237 60-131 (316)
128 PTZ00244 serine/threonine-prot 92.3 0.3 6.6E-06 48.1 6.2 23 337-359 224-246 (294)
129 PTZ00480 serine/threonine-prot 91.9 0.38 8.1E-06 48.0 6.4 65 163-238 60-130 (320)
130 PTZ00239 serine/threonine prot 91.9 0.5 1.1E-05 46.8 7.2 65 163-238 44-114 (303)
131 cd07419 MPP_Bsu1_C Arabidopsis 91.3 0.61 1.3E-05 46.4 7.2 22 337-358 242-263 (311)
132 smart00060 FN3 Fibronectin typ 91.2 1.6 3.6E-05 32.0 8.1 69 63-141 6-76 (83)
133 cd00063 FN3 Fibronectin type 3 90.6 1.9 4.2E-05 32.6 8.3 69 61-141 4-76 (93)
134 KOG4221 Receptor mediating net 85.8 1.3 2.9E-05 50.5 5.6 80 60-154 618-712 (1381)
135 PF04042 DNA_pol_E_B: DNA poly 82.8 1.7 3.7E-05 40.4 4.4 75 164-238 1-91 (209)
136 PTZ00235 DNA polymerase epsilo 79.9 11 0.00023 36.9 8.7 78 158-237 24-121 (291)
137 KOG4221 Receptor mediating net 76.7 16 0.00035 42.2 9.9 84 60-154 523-612 (1381)
138 KOG3513 Neural cell adhesion m 75.7 9.3 0.0002 43.7 7.9 72 59-141 821-896 (1051)
139 KOG0372 Serine/threonine speci 58.7 16 0.00034 34.8 4.5 65 164-238 45-114 (303)
140 KOG3513 Neural cell adhesion m 58.0 42 0.00091 38.6 8.4 89 59-156 616-715 (1051)
141 KOG0371 Serine/threonine prote 54.2 16 0.00035 34.9 3.8 66 163-238 61-131 (319)
142 KOG4258 Insulin/growth factor 52.9 39 0.00085 37.8 6.9 111 58-170 486-623 (1025)
143 KOG0374 Serine/threonine speci 52.5 14 0.0003 37.1 3.4 68 163-238 60-131 (331)
144 PF07353 Uroplakin_II: Uroplak 52.0 15 0.00032 32.3 3.0 32 124-155 104-140 (184)
145 PF06874 FBPase_2: Firmicute f 51.6 13 0.00027 40.1 3.0 49 180-239 176-225 (640)
146 COG2248 Predicted hydrolase (m 51.0 50 0.0011 31.7 6.5 76 159-237 174-249 (304)
147 cd02850 Cellulase_N_term Cellu 46.0 1.4E+02 0.0031 23.3 8.3 24 118-141 54-78 (86)
148 PF08139 LPAM_1: Prokaryotic m 43.7 27 0.00059 20.7 2.3 18 11-28 7-24 (25)
149 PF05423 Mycobact_memb: Mycoba 41.0 63 0.0014 28.1 5.2 29 56-84 45-73 (140)
150 PRK10301 hypothetical protein; 40.3 2.3E+02 0.0049 24.0 10.1 14 59-72 43-56 (124)
151 KOG0373 Serine/threonine speci 39.7 23 0.00049 33.1 2.3 64 164-238 48-117 (306)
152 TIGR02855 spore_yabG sporulati 39.4 24 0.00051 34.1 2.5 50 297-359 115-165 (283)
153 PF05582 Peptidase_U57: YabG p 38.5 30 0.00066 33.6 3.1 51 297-360 116-167 (287)
154 COG3855 Fbp Uncharacterized pr 36.8 38 0.00083 35.1 3.6 42 187-239 190-231 (648)
155 PF10179 DUF2369: Uncharacteri 35.9 1.9E+02 0.0041 28.6 8.2 19 123-141 261-279 (300)
156 PF09949 DUF2183: Uncharacteri 33.8 70 0.0015 26.0 4.2 28 162-191 65-92 (100)
157 cd02856 Glycogen_debranching_e 33.2 55 0.0012 26.5 3.5 24 118-141 43-66 (103)
158 KOG0196 Tyrosine kinase, EPH ( 33.1 1.3E+02 0.0027 33.9 7.0 98 33-141 314-417 (996)
159 cd02852 Isoamylase_N_term Isoa 31.8 59 0.0013 27.0 3.6 22 119-140 48-69 (119)
160 PF01108 Tissue_fac: Tissue fa 30.7 2.9E+02 0.0062 22.3 8.2 70 60-141 24-98 (107)
161 cd02853 MTHase_N_term Maltooli 30.5 62 0.0013 25.1 3.3 23 119-142 39-61 (85)
162 PF10179 DUF2369: Uncharacteri 28.9 46 0.001 32.8 2.7 19 122-140 15-33 (300)
163 cd07424 MPP_PrpA_PrpB PrpA and 28.7 57 0.0012 30.1 3.3 14 348-361 168-181 (207)
164 KOG2476 Uncharacterized conser 28.5 99 0.0021 32.2 5.0 66 161-235 5-75 (528)
165 cd02860 Pullulanase_N_term Pul 28.1 68 0.0015 25.7 3.2 24 118-141 45-68 (100)
166 PF09294 Interfer-bind: Interf 27.8 51 0.0011 26.5 2.5 19 123-141 68-86 (106)
167 COG2843 PgsA Putative enzyme o 26.9 1.5E+02 0.0032 30.3 6.0 59 299-364 213-272 (372)
168 PF13473 Cupredoxin_1: Cupredo 26.1 1.5E+02 0.0032 23.9 5.0 64 58-141 31-94 (104)
169 PRK13792 lysozyme inhibitor; P 23.2 4.7E+02 0.01 22.3 7.7 23 60-84 43-65 (127)
170 PF03808 Glyco_tran_WecB: Glyc 21.9 3.1E+02 0.0067 24.5 6.6 52 293-356 58-109 (172)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-86 Score=656.39 Aligned_cols=424 Identities=39% Similarity=0.624 Sum_probs=375.3
Q ss_pred hhccCCCcccccccCCCCCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCC---
Q 011680 24 LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKY--- 100 (479)
Q Consensus 24 ~~~~~~~~~~~~~r~~~~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~--- 100 (479)
...|..+.++.+.|...++..++.+..++..|...++|+||||++++... +|+|+|.|.+. ..+.|+|+...++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~ 85 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNS 85 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCcccc
Confidence 34566888999999988888888888788889999999999999999885 99999999984 34899999876552
Q ss_pred --cceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCCCC-ccceEEEECCCCCCCCCCeEEEEEecCCCCCChH
Q 011680 101 --DSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDGD-SSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSL 177 (479)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~g~-~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~ 177 (479)
...+.+.+..|...+++++++|+|++++|+|+|+||||||++. .|++++|+|+| +++.+.+|+++||+|+.....
T Consensus 86 ~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~ 163 (452)
T KOG1378|consen 86 AARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT 163 (452)
T ss_pred ccccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEcccccccccc
Confidence 2233444444544568999999999999999999999999843 47799999999 356899999999999998888
Q ss_pred HHHHHHHHh-CCCEEEEcCcccccCCCCCCchh-hhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccccccccc
Q 011680 178 STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVG-IRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR 255 (479)
Q Consensus 178 ~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 255 (479)
.++....++ ++|+|||.||++|++++ . .+||+|++++|++++.+|+|++.||||+++.+.. .|.+|.+|
T Consensus 164 s~~~~~~~~~k~d~vlhiGDlsYa~~~-----~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~R 234 (452)
T KOG1378|consen 164 STLRNQEENLKPDAVLHIGDLSYAMGY-----SNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSAR 234 (452)
T ss_pred chHhHHhcccCCcEEEEecchhhcCCC-----CccchHHHHhhhhhhhccCceEEecccccccCCCcc----ccccccee
Confidence 888888877 59999999999999984 4 6999999999999999999999999999876542 79999999
Q ss_pred ccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC--CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC-CCCC
Q 011680 256 IATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYME 332 (479)
Q Consensus 256 f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~-~~~~ 332 (479)
|.||.+++.+..++||||++|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|.|+|++... ++.+
T Consensus 235 f~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~re 314 (452)
T KOG1378|consen 235 FNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYRE 314 (452)
T ss_pred eccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhcc
Confidence 9999998888888999999999999999999885 356999999999999999877999999999999998875 6666
Q ss_pred CH--HHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCC
Q 011680 333 GE--SMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQP 410 (479)
Q Consensus 333 ~~--~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 410 (479)
++ .+|..|++||.+++||++|.||+|+|||++|++|.++...++ +.++.+++||+||++|+||+.++.+. +..+||
T Consensus 315 G~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~-~~~~~p 392 (452)
T KOG1378|consen 315 GEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWG-PVHLVDGMAPIYITVGDGGNHEHLDP-FSSPQP 392 (452)
T ss_pred CcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCC-cccccCCCCCEEEEEccCCcccccCc-ccCCCC
Confidence 65 889999999999999999999999999999999999888777 88999999999999999999998754 444899
Q ss_pred CCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeCcccChh
Q 011680 411 NYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQYWSNNL 462 (479)
Q Consensus 411 ~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~~~~~ 462 (479)
+||+||+++|||++|+++|+||+.|+|++|.|++.++.|+|||.|+++.+..
T Consensus 393 ~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~ 444 (452)
T KOG1378|consen 393 EWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVV 444 (452)
T ss_pred cccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccc
Confidence 9999999999999999999999999999998888889999999999877654
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=1.9e-81 Score=644.38 Aligned_cols=405 Identities=38% Similarity=0.669 Sum_probs=350.4
Q ss_pred ccCCCcccccccCCCCCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEE
Q 011680 26 NGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAE 105 (479)
Q Consensus 26 ~~~~~~~~~~~r~~~~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~ 105 (479)
.|+.+.+..|+|++...+.+.+. ..++++..|+||||++++ + ++|+|+|.|.++ ..+.|+||++.+.+..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~qvhls~~~-~-~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~ 85 (427)
T PLN02533 13 IVLAGNVLSYDRPGTRKNLVIHP----DNEDDPTHPDQVHISLVG-P-DKMRISWITQDS-IPPSVVYGTVSGKYEGSAN 85 (427)
T ss_pred hhhccCcccccCCCccccccccc----cCCCCCCCCceEEEEEcC-C-CeEEEEEECCCC-CCCEEEEecCCCCCcceEE
Confidence 44566889999986434333221 223567899999999998 3 699999999975 5689999999988899999
Q ss_pred eeEEEEee-eccccceEEEEEecCCCCCcEEEEEeCCCCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHH
Q 011680 106 GTVTNYTF-YKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYM 184 (479)
Q Consensus 106 ~~~~~~~~-~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~ 184 (479)
|++++|++ ..+.++++|+|+|+||+|+|+|+|||+.+..+++++|+|+|. ..+++|+++||+|.......+++++.
T Consensus 86 g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i~ 162 (427)
T PLN02533 86 GTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHVS 162 (427)
T ss_pred EEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHHH
Confidence 99888875 346789999999999999999999999755567999999985 46899999999998766677888888
Q ss_pred HhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCC
Q 011680 185 QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264 (479)
Q Consensus 185 ~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~ 264 (479)
+.+|||||++||++|++. . +.+|+.|+++++++.+.+|+|+++||||+...+.. ....|..|..+|.||..+.+
T Consensus 163 ~~~pD~vl~~GDl~y~~~----~-~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g 236 (427)
T PLN02533 163 KWDYDVFILPGDLSYANF----Y-QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESG 236 (427)
T ss_pred hcCCCEEEEcCccccccc----h-HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccC
Confidence 889999999999999876 3 78999999999999999999999999998654321 13467789999999987666
Q ss_pred CCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCC--CHHHHHHHHH
Q 011680 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME--GESMRAVFES 342 (479)
Q Consensus 265 ~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~--~~~~r~~l~~ 342 (479)
...+.||+|++|++|||+||++.++....+|++||+++|+++++++++|+||++|+|+|+++..+..+ ...+++.|++
T Consensus 237 ~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~ 316 (427)
T PLN02533 237 STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMET 316 (427)
T ss_pred CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHH
Confidence 66789999999999999999998888889999999999999887788999999999999887654333 3467899999
Q ss_pred HHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccE
Q 011680 343 WFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGH 422 (479)
Q Consensus 343 l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~ 422 (479)
||.+++||++|+||+|.|||++|+++++ .+++||+||++|+||+.+++...+.+++|+||+||+.+|||
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~-----------~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~ 385 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGK-----------TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGH 385 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCc-----------cCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCE
Confidence 9999999999999999999999999876 46889999999999999987667778899999999999999
Q ss_pred EEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeCc
Q 011680 423 STLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQY 457 (479)
Q Consensus 423 ~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~ 457 (479)
++|+|.|.||+.|+|++|+||+.++.|+|||+|.-
T Consensus 386 ~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 386 GQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred EEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 99999999999999999999988899999999974
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=1e-47 Score=380.06 Aligned_cols=285 Identities=42% Similarity=0.750 Sum_probs=228.0
Q ss_pred CCCeEEEEEecCCCC-CChHHHHHHHHH--hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 159 DAPYTFGIIGDLGQT-YNSLSTLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~--~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
+.++||+++||+|.. .....+++++.+ .+|||||++||++|+++.. . ..+|+.|++.++++.+.+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--N-GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--c-chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 457999999999873 456788999888 4999999999999987621 1 378999999999998899999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC---CCCHHHHHHHHHHHhhcccCCCC
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
|+....... ....+..++.++........+.||+|++|+++||+|||+... ....+|++||+++|+++++.+.+
T Consensus 79 D~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFY---KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCc---ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 985432110 011111123334333344467899999999999999998765 45799999999999987655678
Q ss_pred eEEEEecccccccCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEE
Q 011680 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYL 390 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi 390 (479)
|+||++|+|+++....... .....++.|+++|.+++|+++|+||+|.|+|++|+++++.. +.+..+.+++|++||
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yi 232 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHI 232 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEE
Confidence 9999999999987654332 24577899999999999999999999999999999987742 445556789999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 391 TVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 391 ~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
++|+||+.++...... +.++|++++...+||++|++.++|+|+++|+++.+|+ +.|+|+|.|
T Consensus 233 v~G~~G~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 233 VIGAGGNDEGLDPFSA-PPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred EECCCccccCcCcccC-CCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 9999999886432221 2357999999999999999999889999999999998 999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=3.3e-35 Score=292.54 Aligned_cols=260 Identities=15% Similarity=0.237 Sum_probs=191.5
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHH----HHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHHh--hcCCeE
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKH----YMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA--AYQPWI 229 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~----~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l~--~~~P~~ 229 (479)
-...++|+++||+|.+...+..+++ +.++ ++||||.+||+. .++..+.+ +.+|++ |.+...... ..+||+
T Consensus 23 ~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s~~L~~Pwy 100 (394)
T PTZ00422 23 VKAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEESGDMQIPFF 100 (394)
T ss_pred cCCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcchhhCCCeE
Confidence 3568999999999976555544433 3333 899999999998 55555555 777876 444444333 478999
Q ss_pred EcCCCcccccCCCCCccc--------------cc---ccccccccCCcCCCCCCCCceEEE----Ec-------------
Q 011680 230 WSAGNHEIEFMPNMGEVI--------------PF---KSYLHRIATPYTASKSTNPLWYAI----RR------------- 275 (479)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~--------------~~---~~~~~~f~~P~~~~~~~~~~yysf----~~------------- 275 (479)
+|+||||+..+....-.. .+ .....||.||. .||.+ ..
T Consensus 101 ~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 101 TVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred EeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCC
Confidence 999999985443221000 00 01235888884 57754 21
Q ss_pred CeEEEEEeecCCC-----CCC-CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCC
Q 011680 276 ASAHIIVLSSYSP-----YVK-YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349 (479)
Q Consensus 276 g~v~fi~Lds~~~-----~~~-~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~V 349 (479)
..+.||+|||... +.. .+.|++||+++|+.+ ++.++|+||+.|||+|+++.++ ....++..|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 2389999999632 222 478999999999754 3567899999999999988653 356789999999999999
Q ss_pred cEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEec
Q 011680 350 DFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKN 429 (479)
Q Consensus 350 dlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~ 429 (479)
|++|+||+|+||+.. .+++.||++|+||...+.. . ..++++.|....+||+.+++ +
T Consensus 250 dlYisGHDH~lq~i~-------------------~~gt~yIvSGaGs~~~~~~---~-~~~~~s~F~~~~~GF~~~~l-~ 305 (394)
T PTZ00422 250 DLYISGYDRNMEVLT-------------------DEGTAHINCGSGGNSGRKS---I-MKNSKSLFYSEDIGFCIHEL-N 305 (394)
T ss_pred CEEEEccccceEEec-------------------CCCceEEEeCccccccCCC---C-CCCCCcceecCCCCEEEEEE-e
Confidence 999999999999973 3478999999999876431 1 22457889888999999998 5
Q ss_pred CceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 430 RTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 430 ~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
.+.+.++|+.+.+|+ +.+++.+.++
T Consensus 306 ~~~l~~~fid~~~Gk--vL~~~~~~~~ 330 (394)
T PTZ00422 306 AEGMVTKFVSGNTGE--VLYTHKQPLK 330 (394)
T ss_pred cCEEEEEEEeCCCCc--EEEEeeeccc
Confidence 668999998667999 8999988765
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=100.00 E-value=2e-33 Score=275.56 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=176.4
Q ss_pred eEEEEEecCCCC-CChHH----HHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHH-HHHHHHHHHhhcCCeEEcCCC
Q 011680 162 YTFGIIGDLGQT-YNSLS----TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWD-SWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~-~~~~~----~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~-~~~~~~~~l~~~~P~~~v~GN 234 (479)
++|+++||+|.. ...+. .+.++.+ .+|||||++||++|+++....+ ...|. .|.+.+..+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 23222 2333333 3999999999999987743333 34443 355555444457899999999
Q ss_pred cccccCCCCCccccccc--ccccccCCcCCCCCCCCceEEEEcC------eEEEEEeecCCCC---------------CC
Q 011680 235 HEIEFMPNMGEVIPFKS--YLHRIATPYTASKSTNPLWYAIRRA------SAHIIVLSSYSPY---------------VK 291 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~--~~~~f~~P~~~~~~~~~~yysf~~g------~v~fi~Lds~~~~---------------~~ 291 (479)
||+...... ...+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~~~--~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNVSA--QIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCchh--eeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 997532110 111111 13334444 469999998 7999999997531 12
Q ss_pred CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCee
Q 011680 292 YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY 371 (479)
Q Consensus 292 ~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~ 371 (479)
+.+|++||+++|+++ ..+|+||++|||+++..... .....++.|++++.+++|+++|+||+|.+++..+
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------ 218 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------ 218 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------
Confidence 589999999999985 34899999999999765432 1356789999999999999999999999998752
Q ss_pred cccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCC
Q 011680 372 NFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443 (479)
Q Consensus 372 ~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 443 (479)
+..++.||++|+||...+.........|.|+.++...+||++|+|.++ ++.++|+ +.||
T Consensus 219 -----------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~-~l~~~~~-~~~g 277 (277)
T cd07378 219 -----------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKE-ELTVRFY-DADG 277 (277)
T ss_pred -----------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecC-EEEEEEE-CCCC
Confidence 246899999999998765432222223457888888999999999654 7999987 4565
No 6
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.97 E-value=1.2e-29 Score=265.35 Aligned_cols=289 Identities=20% Similarity=0.270 Sum_probs=155.9
Q ss_pred ecCCCCCcEEEEEEcCCC--------CCccEEEEEecCCCCc--ceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 68 QGDYDGKAVIISWVTPNE--------LGSNRVQYGKLEKKYD--SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 68 ~~~~~~~~~~i~W~t~~~--------~~~~~V~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
..|||..+.+|.|++..+ ..+..|+|..+.+... ....+...+ ....+++++++|+||+|+|+|+|
T Consensus 4 asGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y 79 (453)
T PF09423_consen 4 ASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYY 79 (453)
T ss_dssp EEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEE
T ss_pred cccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEE
Confidence 346777899999999875 2245666666554332 233333322 23578999999999999999999
Q ss_pred EeCC---CCccceEEEECCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCC---C------
Q 011680 138 KIGD---GDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRY---E------ 204 (479)
Q Consensus 138 ~v~~---g~~~~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~---~------ 204 (479)
|+.. +..+++++|+|+|.. ....+||+++||.+.......++.++.+. +|||+||+||++|++.. .
T Consensus 80 ~~~~~~~~~~s~~g~~rT~p~~-~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 80 RFVVDGGGQTSPVGRFRTAPDG-DPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEecCCCCCCceEEEcCCCC-CCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 9986 356789999999753 23569999999998866678889999984 99999999999999852 0
Q ss_pred ----------C---CchhhhHHHH--HHHHHHHhhcCCeEEcCCCcccccCCCC-Ccc------ccc-----cccccccc
Q 011680 205 ----------Y---NDVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNM-GEV------IPF-----KSYLHRIA 257 (479)
Q Consensus 205 ----------~---~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~------~~~-----~~~~~~f~ 257 (479)
. .+|..+|..+ ...++.+.+.+|++.+|++||+..+... +.. ..+ .+++.+|.
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0 0123334433 2446777889999999999999543221 100 011 12222222
Q ss_pred -CCcCCC---CCCCCceEEEEcCe-EEEEEeecCCCCC---------------------CCHHHHHHHHHHHhhcccCCC
Q 011680 258 -TPYTAS---KSTNPLWYAIRRAS-AHIIVLSSYSPYV---------------------KYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 258 -~P~~~~---~~~~~~yysf~~g~-v~fi~Lds~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+|.... ......|++|.+|+ +.|++||+..... .|.+|++||++.|++ +.+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCC
Confidence 444321 22346799999999 9999999964311 268999999999998 568
Q ss_pred CeEEEEecccccccCC-----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcccccceeee
Q 011680 312 PWLIVLMHVPLYSSNV-----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERSY 364 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~-----------~~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~H~yer~~ 364 (479)
+|+||+.-.|+..... ..+......|+.|..+|.+.++. ++|+|.+|......
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 9999999888744321 12233467789999999988875 78999999877554
No 7
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.1e-28 Score=241.72 Aligned_cols=295 Identities=17% Similarity=0.172 Sum_probs=210.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCC-------CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNE-------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYD 132 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~-------~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~ 132 (479)
.|..-|-...|||.....|.|++.++ +.+..+||++.++..+.+..|+..+. ...++++|+.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCC
Confidence 34233334457778899999998762 34556777777765554444444332 25689999999999999
Q ss_pred cEEEEEeCCC-CccceEEEECCCCCCCC-CCeEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCC------
Q 011680 133 TKYYYKIGDG-DSSREFWFQTPPKIHPD-APYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYE------ 204 (479)
Q Consensus 133 t~Y~Y~v~~g-~~~~~~~F~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~------ 204 (479)
+.|+||+..| ..+++++|||+|+++.. .-++|+..+|.|...+...++++|.+.+|||+||+||++|+++.-
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~ 191 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSL 191 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCccccccc
Confidence 9999999874 34679999999997655 335677777777777778889999999999999999999998731
Q ss_pred ----C--------------CchhhhHHHH--HHHHHHHhhcCCeEEcCCCcccccCCCCCcc--------ccc-----cc
Q 011680 205 ----Y--------------NDVGIRWDSW--GRFIEQSAAYQPWIWSAGNHEIEFMPNMGEV--------IPF-----KS 251 (479)
Q Consensus 205 ----~--------------~~~~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~--------~~~-----~~ 251 (479)
. .+|+.+|..+ ...++...+..||++.|++||+.++...+.. ..+ .+
T Consensus 192 ~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A 271 (522)
T COG3540 192 NSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAA 271 (522)
T ss_pred ccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHH
Confidence 1 1245556554 3457777889999999999999765321100 111 13
Q ss_pred cccccc-CCcCCCCCC--CCceEEEEcCe-EEEEEeecCCCC------C----------------CCHHHHHHHHHHHhh
Q 011680 252 YLHRIA-TPYTASKST--NPLWYAIRRAS-AHIIVLSSYSPY------V----------------KYTPQWWWLREELKK 305 (479)
Q Consensus 252 ~~~~f~-~P~~~~~~~--~~~yysf~~g~-v~fi~Lds~~~~------~----------------~~~~Q~~WL~~~L~~ 305 (479)
++.++. ||.+..... ...|.+|.||+ +.|.+||+..+. + .|..|.+||++.|.+
T Consensus 272 ~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 272 RQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 333332 887654322 57899999999 789999986532 1 268999999999999
Q ss_pred cccCCCCeEEEEecccccc----cCC--C-------CCCCCHHHHHHHHHHHHHcCCc--EEEEcccccce
Q 011680 306 VDREKTPWLIVLMHVPLYS----SNV--V-------HYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYE 361 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~----~~~--~-------~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~H~ye 361 (479)
+++.|+||..-.|+-. ... . .+.....-|+.|..++...++. +||+|.+|...
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 7899999999988721 110 0 0111234488999999988865 89999999643
No 8
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=8.6e-28 Score=221.15 Aligned_cols=270 Identities=17% Similarity=0.254 Sum_probs=175.3
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCChHH-----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHH
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSLS-----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQ 221 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~-----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~ 221 (479)
++.-|+. ++..++|+++||+|.....+. .+..+.+. +.||||.+||++|.++....+ +.+++. |......
T Consensus 33 ~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 33 RLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTA 109 (336)
T ss_pred hhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccC
Confidence 4555554 568899999999986544322 12334444 999999999999999865544 555443 3232221
Q ss_pred HhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEE----EE--cCeEEEEEeecCCC-------
Q 011680 222 SAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA----IR--RASAHIIVLSSYSP------- 288 (479)
Q Consensus 222 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yys----f~--~g~v~fi~Lds~~~------- 288 (479)
-.-+.||+.+.||||+..+-...-..-+.....||..|.. ||. .+ .-++.++|+|+...
T Consensus 110 pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~~~~~yd 181 (336)
T KOG2679|consen 110 PSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYD 181 (336)
T ss_pred cccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheecccccccc
Confidence 1225699999999998654322111113444566765531 221 01 11234445444221
Q ss_pred CCC-------CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 289 YVK-------YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 289 ~~~-------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+.. ...++.||+..|++ +.++|+||+.|||+.+.+.+ +...++++.|.|+|++++||++++||+|+.|
T Consensus 182 w~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQ 256 (336)
T KOG2679|consen 182 WRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQ 256 (336)
T ss_pred cccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhh
Confidence 111 26788999999999 78999999999999987654 4477899999999999999999999999999
Q ss_pred eeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCC-CCCCCCceeeeCcccEEEEEEecCceEEEEEEEc
Q 011680 362 RSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFL-DPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRN 440 (479)
Q Consensus 362 r~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~-~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~ 440 (479)
... ....++-|+++|+|...-. ..... ...|+.-.|.-..-||+-+++ .+..+++.|+.
T Consensus 257 his-----------------~~e~~iqf~tSGagSkaw~-g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD- 316 (336)
T KOG2679|consen 257 HIS-----------------SPESGIQFVTSGAGSKAWR-GTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYD- 316 (336)
T ss_pred hcc-----------------CCCCCeeEEeeCCcccccC-CCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEe-
Confidence 863 1245666777776544321 11111 123445566666679999999 55678888876
Q ss_pred CCCCeeeeeEEEEEeC
Q 011680 441 DDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 441 ~dg~~~~~D~~~i~~~ 456 (479)
..|+ +..+....++
T Consensus 317 ~~G~--~Lhk~~t~kr 330 (336)
T KOG2679|consen 317 VSGK--VLHKWSTSKR 330 (336)
T ss_pred ccCc--eEEEeecccc
Confidence 5788 5665554443
No 9
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.96 E-value=2.1e-27 Score=230.95 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=160.4
Q ss_pred CCeEEEEEecCCCCCC--h---------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHH
Q 011680 160 APYTFGIIGDLGQTYN--S---------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 220 (479)
.+++|+++||+|.+.. . ...++.+.+. +||+||++||+++.+...... ..+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~-~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELR-ERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhH-HHHHHHHHHHHh
Confidence 5799999999998731 1 1233445555 899999999999876521101 234566666666
Q ss_pred HHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCC------CCHH
Q 011680 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV------KYTP 294 (479)
Q Consensus 221 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~------~~~~ 294 (479)
.+...+|+++++||||+...+. ...+..|...| +..||+|++|+++||+|||..... ...+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 6555789999999999743221 11222333333 235899999999999999965321 2478
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEecccccccCCCCC----CCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCe
Q 011680 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY----MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIH 370 (479)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~----~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~ 370 (479)
|++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+..
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------ 222 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------ 222 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE------
Confidence 999999999987534667999999999985443211 1235678899999999999999999999887642
Q ss_pred ecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEE
Q 011680 371 YNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWN 438 (479)
Q Consensus 371 ~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~ 438 (479)
-.|+.|+++++.|.... ....||..++|+.+. ++++++
T Consensus 223 -------------~~g~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 -------------YGGLEMVVTSAIGAQLG----------------NDKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred -------------ECCEEEEEcCceecccC----------------CCCCCcEEEEECCCc-eeeeee
Confidence 13667888877775321 113699999996544 677775
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.92 E-value=3.2e-24 Score=205.76 Aligned_cols=217 Identities=18% Similarity=0.193 Sum_probs=151.7
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC
Q 011680 163 TFGIIGDLGQTYNS-------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (479)
Q Consensus 163 ~f~~~gD~~~~~~~-------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P 227 (479)
||++++|+|.+... ..+++.+.+. +||+||++||+++... ...|+.+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987531 2334455555 8999999999998755 55666676776665 789
Q ss_pred eEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCC----CCHHHHHHHHHHH
Q 011680 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV----KYTPQWWWLREEL 303 (479)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~----~~~~Q~~WL~~~L 303 (479)
++.++||||... .+...|..... .....+|+|+.++++||+||+..... ..++|++||++.|
T Consensus 73 ~~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 999999999621 12222211100 12356889999999999999865321 2578999999999
Q ss_pred hhcccCCCCeEEEEecccccccCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeeeCCeecccCCccccc
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPV 381 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~~-~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~ 381 (479)
++. ..+++|+++|+|++....... ......++.+.+++.++ +|+++|+||.|......
T Consensus 139 ~~~---~~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------------- 198 (240)
T cd07402 139 AEA---PDKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS----------------- 198 (240)
T ss_pred HhC---CCCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------------
Confidence 985 346789999999976542111 11112367899999999 99999999999876542
Q ss_pred CCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecC
Q 011680 382 PDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNR 430 (479)
Q Consensus 382 ~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~ 430 (479)
-+|+.++++|+.|.... ..+...+..+..+||..+.+.++
T Consensus 199 --~~g~~~~~~gs~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 --WGGIPLLTAPSTCHQFA-------PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred --ECCEEEEEcCcceeeec-------CCCCcccccccCCCCcEEEEecC
Confidence 25678889888887542 22334454456789998888543
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.91 E-value=4.1e-23 Score=201.18 Aligned_cols=197 Identities=21% Similarity=0.260 Sum_probs=132.1
Q ss_pred eEEEEEecCCCCCC----------hHH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC
Q 011680 162 YTFGIIGDLGQTYN----------SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (479)
Q Consensus 162 ~~f~~~gD~~~~~~----------~~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P 227 (479)
|||+++||+|.... +.. +++.+.+.+||+||++||+++.+.. .. ...|+.+.+.+..+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~--~~-~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNA--RA-EEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCc--hH-HHHHHHHHHHHHhc--CCC
Confidence 69999999996532 112 2344444489999999999976541 01 25555555555554 589
Q ss_pred eEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC-------------------
Q 011680 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------------------- 288 (479)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~------------------- 288 (479)
+++++||||+.... ..+.. + .. ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~--------~~~~~-~-~~---~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPS--------REYLL-L-YT---LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCcccccccc--------Hhhhh-c-cc---ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 99999999974211 11100 0 00 01123569999999999999999531
Q ss_pred -------------C--CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 011680 289 -------------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFI 352 (479)
Q Consensus 289 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vdlv 352 (479)
+ ...++|++||+++|+++.. ...++||++|+|++...... ......++.+.+++.++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 1247999999999998642 33578999999987654311 11112256788999995 79999
Q ss_pred EEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCC
Q 011680 353 FAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGN 397 (479)
Q Consensus 353 lsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~ 397 (479)
|+||+|.++... .+|+.|+++|+-..
T Consensus 221 ~~GH~H~~~~~~-------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 221 ISGHDHEGGYAQ-------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred EcCCcCCCCccc-------------------cCCeeEEEechhhc
Confidence 999999987532 36778888876543
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.90 E-value=3.7e-22 Score=195.36 Aligned_cols=240 Identities=17% Similarity=0.153 Sum_probs=149.4
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCC---------hH----HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHH
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYN---------SL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWD 213 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~---------~~----~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~ 213 (479)
..+|+++ +..+++|++++|+|.... .. .+++.+.+. +||+||++||+++... ...++
T Consensus 4 ~~~~~~~--~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~ 75 (275)
T PRK11148 4 LLTLPLA--GEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQ 75 (275)
T ss_pred ccccccC--CCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHH
Confidence 3566665 457899999999997321 12 234444443 6999999999998654 45566
Q ss_pred HHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC---CC
Q 011680 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---YV 290 (479)
Q Consensus 214 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~---~~ 290 (479)
.+.+.++.+ ..|+++++||||... .+..+.....+ ...++.+..++++||+|||... .+
T Consensus 76 ~~~~~l~~l--~~Pv~~v~GNHD~~~--------~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G 137 (275)
T PRK11148 76 HFAEGIAPL--RKPCVWLPGNHDFQP--------AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHG 137 (275)
T ss_pred HHHHHHhhc--CCcEEEeCCCCCChH--------HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCC
Confidence 666666655 689999999999631 11111111111 1123334455699999999643 11
Q ss_pred -CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC-CCCCCHHHHHHHHHHHHHc-CCcEEEEcccccceeeeeee
Q 011680 291 -KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 291 -~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~-~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p~~ 367 (479)
.+.+|++||+++|+++ +.+..||++|||+...+.. .........++|.++++++ +|+++|+||+|.....
T Consensus 138 ~l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~---- 210 (275)
T PRK11148 138 ELSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL---- 210 (275)
T ss_pred EeCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc----
Confidence 2589999999999985 3345666677655433321 1111112346889999998 8999999999985432
Q ss_pred CCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCC
Q 011680 368 NIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 443 (479)
Q Consensus 368 ~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 443 (479)
...|+.++++++.+..... ..+.+ +.....+||..+++.+++.+..++++-+++
T Consensus 211 ---------------~~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 211 ---------------DWNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred ---------------eECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 1356777777666543211 01111 122334799999997666676666664443
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.87 E-value=4e-21 Score=185.84 Aligned_cols=191 Identities=17% Similarity=0.162 Sum_probs=123.7
Q ss_pred EEEEecCCCCCChHH--------HHHHHHHhCCCEEEEcCcccccCCCC---CCchhhhHHHHHHHHHHHhh--cCCeEE
Q 011680 164 FGIIGDLGQTYNSLS--------TLKHYMQSGGQSVLFLGDLSYADRYE---YNDVGIRWDSWGRFIEQSAA--YQPWIW 230 (479)
Q Consensus 164 f~~~gD~~~~~~~~~--------~l~~~~~~~pD~vl~~GDl~y~~~~~---~~~~~~~~~~~~~~~~~l~~--~~P~~~ 230 (479)
|++++|+|.+....+ .++.+.+.+||++|++||+++..... ....+.+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998744211 22334444999999999999754311 11125678888777655432 589999
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceE--EEEcCeEEEEEeecCCCC----------CCCHHHHHH
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY--AIRRASAHIIVLSSYSPY----------VKYTPQWWW 298 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yy--sf~~g~v~fi~Lds~~~~----------~~~~~Q~~W 298 (479)
++||||+....... .....|.++..... ....+| .++.|+++||+|||.... ...++|++|
T Consensus 82 v~GNHD~~~~~~~~--~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~w 154 (256)
T cd07401 82 IRGNHDLFNIPSLD--SENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDR 154 (256)
T ss_pred eCCCCCcCCCCCcc--chhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHH
Confidence 99999984322111 11112221111110 012233 334589999999997421 124899999
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~ 367 (479)
|+++|+++ .+.+++||++|+|+....... ....+ .+.++|++++|+++||||.|.+++..|+-
T Consensus 155 L~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 155 LEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 99999975 345689999999996533211 11222 38999999999999999999999966753
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.84 E-value=3.6e-20 Score=174.38 Aligned_cols=150 Identities=19% Similarity=0.240 Sum_probs=110.4
Q ss_pred eEEEEEecCCCCCC-h----HHHHHHHH----HhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcCCeEEc
Q 011680 162 YTFGIIGDLGQTYN-S----LSTLKHYM----QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWS 231 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-~----~~~l~~~~----~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v 231 (479)
|||++++|+|.... . ...++.+. +.+||+||++||+++.+. . ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~-~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----N-DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----C-HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 68999999987543 1 12333333 338999999999998654 3 568888888888886 57999999
Q ss_pred CCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+||||. ++.+|+. ...+|++||+++|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CC
Confidence 999992 1222222 2489999999999984 34
Q ss_pred CeEEEEecccccccCCCCCCC-----CHHHHHHHHHHHHHc-CCcEEEEcccccceeeee
Q 011680 312 PWLIVLMHVPLYSSNVVHYME-----GESMRAVFESWFVHS-RVDFIFAGHVHAYERSYR 365 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~-----~~~~r~~l~~l~~~~-~VdlvlsGH~H~yer~~p 365 (479)
+++||++|+|++..+...... ....++.|+++++++ +|+++|+||+|.+.+...
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 679999999998654332111 123456788999998 799999999999987753
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.78 E-value=2e-18 Score=170.95 Aligned_cols=194 Identities=18% Similarity=0.191 Sum_probs=126.2
Q ss_pred EEecCCCCCC---hHHHHHHHHHh--CCCEEEEcCcccccCCCCCCch-hh--hHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 166 IIGDLGQTYN---SLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDV-GI--RWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 166 ~~gD~~~~~~---~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~-~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
-+|+.++... ...+++.+.+. +|||||++||++..+.+..... .. .+..+.+.++.....+|+++++||||+
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3556553322 23456667776 8999999999998876322110 11 244556666666678999999999997
Q ss_pred ccCCCCC----ccccccccccccc--CCcCCC-CCCCCceEEEE-cCeEEEEEeecCCCCC-----------CCHHHHHH
Q 011680 238 EFMPNMG----EVIPFKSYLHRIA--TPYTAS-KSTNPLWYAIR-RASAHIIVLSSYSPYV-----------KYTPQWWW 298 (479)
Q Consensus 238 ~~~~~~~----~~~~~~~~~~~f~--~P~~~~-~~~~~~yysf~-~g~v~fi~Lds~~~~~-----------~~~~Q~~W 298 (479)
....... ....+..+...|. +|..+. ....+.||++. .++++||+|||...+. ....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 5321110 0111222222232 332211 11235689998 8889999999975321 23789999
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccceee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~yer~ 363 (479)
|+++|++++. +...++|++|+|+....... .....+.|.+++.+|+ |.++|+||+|..+..
T Consensus 202 L~~~L~~a~~-~~~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 202 LEDELQEAEQ-AGEKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHH-CCCeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999998743 23567889999997643221 1356789999999997 778999999987765
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.75 E-value=2.4e-17 Score=158.77 Aligned_cols=170 Identities=22% Similarity=0.252 Sum_probs=109.1
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHH---hhcCCeEEcCCCcccccCCCCCccccccccc
Q 011680 179 TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQS---AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYL 253 (479)
Q Consensus 179 ~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~ 253 (479)
.+..+.+. +||+||++||+++.+.. .. ..+|.+ +.++.+-+ ....|++.++||||+.+..... ......|.
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~d~G~~--~~-~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLFDGGRD--WA-DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHhcCCCEEEEecccccCCee--Cc-HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 34444444 99999999999987541 12 345543 32322222 2247899999999985432111 11234555
Q ss_pred ccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC-----CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCC
Q 011680 254 HRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV 328 (479)
Q Consensus 254 ~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~ 328 (479)
+.|. ...|+|++|+++||+|||.... .....|++||++.|+.. .....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCC
Confidence 5552 2357899999999999996422 13467999999999864 23456899999999864332
Q ss_pred CCC---C---------CHH----H-HHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 329 HYM---E---------GES----M-RAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 329 ~~~---~---------~~~----~-r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
..+ + +.. + .+.-..||.+.++.+||+||+|.|-...
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 111 0 000 1 2344467788899999999999988653
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.74 E-value=1.4e-18 Score=155.65 Aligned_cols=189 Identities=21% Similarity=0.221 Sum_probs=98.9
Q ss_pred eEEEEEecCCCCCChH----HHHHHH-HHhCCCEEEEcCcccccCCCCCCchhhhHHHHH-HHHHHHhhcCCeEEcCCCc
Q 011680 162 YTFGIIGDLGQTYNSL----STLKHY-MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWG-RFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~----~~l~~~-~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNH 235 (479)
+||+++||+|...... ..+... .+.++|+||++||+++.+. . ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGN----P-SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSS----H-HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccc----c-cccchhhhccchhhhhcccccccccccc
Confidence 6999999999875433 222222 3339999999999999876 2 22222211 1233445689999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCC---HHHHHHHHHHHhhcccCCCC
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKY---TPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~ 312 (479)
|+.......................... ..+........................ ..++.|+...++. ...+
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYS--YFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEEC--TESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceeccccccccccccccccccccccc--cCcceeeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 9743110000000000000000000000 000001111111111111111111111 2333333333333 4567
Q ss_pred eEEEEecccccccCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
++||++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999999876643211 11345788999999999999999999986
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.68 E-value=1e-15 Score=142.63 Aligned_cols=150 Identities=18% Similarity=0.225 Sum_probs=98.8
Q ss_pred CeEEEEEecCCCCCCh---------HHH---HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cC
Q 011680 161 PYTFGIIGDLGQTYNS---------LST---LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~---------~~~---l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 226 (479)
.+||++++|+|..... ..+ +.++.+. +||+||++||+++..... ...+..+.++++.+.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~----~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTN----DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCc----hHHHHHHHHHHHHHHHcCC
Confidence 5899999999986432 122 3333333 899999999999876511 1134555566666543 69
Q ss_pred CeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhc
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKV 306 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 306 (479)
|+++++||||.. . .....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHH
Confidence 999999999910 0 12368999999999985
Q ss_pred c--cCCCCeEEEEecccccccCCC---------CCCC---CHHHHHHH-HHHHHHcCCcEEEEcccccceeee
Q 011680 307 D--REKTPWLIVLMHVPLYSSNVV---------HYME---GESMRAVF-ESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 307 ~--~~~~~w~IV~~H~P~~~~~~~---------~~~~---~~~~r~~l-~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
. +....+.++++|+|+...... ...+ .......+ ..+....+|+++|+||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 3 224468999999998653221 0001 11122233 334466789999999999987654
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.67 E-value=1.1e-15 Score=145.73 Aligned_cols=177 Identities=18% Similarity=0.139 Sum_probs=108.2
Q ss_pred EEEEecCCCCCC-----------hHHHHHHHHHh------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 164 FGIIGDLGQTYN-----------SLSTLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 164 f~~~gD~~~~~~-----------~~~~l~~~~~~------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
+.+++|+|.... ..+.++.+.+. +||+||++||+++... ........+.++.+ ..
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~------~~~~~~~l~~l~~l--~~ 72 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK------LEEAKLDLAWIDAL--PG 72 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC------hHHHHHHHHHHHhC--CC
Confidence 357899987621 13455555554 9999999999985432 22222223333332 35
Q ss_pred CeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCC----CC-----------C-
Q 011680 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS----PY-----------V- 290 (479)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~----~~-----------~- 290 (479)
|+++|+||||+... ....+.+.+ +..... -..-.++.++++.|++++... .+ .
T Consensus 73 ~v~~V~GNHD~~~~-------~~~~~~~~l--~~~~~~--~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 73 TKVLLKGNHDYWWG-------SASKLRKAL--EESRLA--LLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred CeEEEeCCccccCC-------CHHHHHHHH--HhcCeE--EeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHH
Confidence 78999999997211 111111111 110000 000233556788898876311 11 0
Q ss_pred -CCHHHHHHHHHHHhhcccCC-CCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeee
Q 011680 291 -KYTPQWWWLREELKKVDREK-TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRIS 367 (479)
Q Consensus 291 -~~~~Q~~WL~~~L~~~~~~~-~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~ 367 (479)
....|++||++.|+++.... ..++|+++|+|++..... ...+..++.+++++++|+||+|..++..|+.
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 02568999999999854222 247999999998764321 2356788899999999999999999887764
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.66 E-value=3e-15 Score=151.99 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=72.1
Q ss_pred CCceEEEE-cCeEEEEEeecCCCC-----CCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCC-----CCCHH
Q 011680 267 NPLWYAIR-RASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-----MEGES 335 (479)
Q Consensus 267 ~~~yysf~-~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~-----~~~~~ 335 (479)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 45699999 899999999997532 1258999999999998 4557899999999987543110 11122
Q ss_pred HHHHHHHHHHHc-CCcEEEEcccccceee
Q 011680 336 MRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (479)
Q Consensus 336 ~r~~l~~l~~~~-~VdlvlsGH~H~yer~ 363 (479)
..++|.++|+++ +|.++|+||.|.-...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 356899999998 7999999999976643
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.66 E-value=1.9e-15 Score=139.07 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=101.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCC
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNM 243 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 243 (479)
++++||+|........ ..+.+.++|+||++||+++... ......+ +.+.. ...|+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~------~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~--- 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGG------KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEI--- 67 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCC------HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHH---
Confidence 5789999976432222 2344448999999999997654 2222222 33332 26899999999995210
Q ss_pred CcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC--C----CCCHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 244 GEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP--Y----VKYTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 244 ~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~--~----~~~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
........... .+ ..+.++++.|+++++... + ...++|++|+ +.|.. ...+.+|++
T Consensus 68 -----~~~~~~~~~~~-------~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 68 -----LGLLTSAGLNL-------HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred -----HHhhhcCcEec-------CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 01100000000 11 234577899999987432 1 2346889998 45544 344678999
Q ss_pred ecccccccC-CCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 318 MHVPLYSSN-VVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 318 ~H~P~~~~~-~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+|+|++... .........-.+.+.+++++++++++|+||+|.-.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 999997631 11111101124678888999999999999999754
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.61 E-value=9.5e-15 Score=140.07 Aligned_cols=176 Identities=14% Similarity=0.110 Sum_probs=104.6
Q ss_pred EEEEEecCCCCCCh---HH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNS---LS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
||++++|+|..... .. .++.+.+.++|+||++||++.... +...+.+.+..+ ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~--------~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQ--------RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchh--------hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999965321 22 334444559999999999996421 112333333332 458999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCC--------------------------
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-------------------------- 289 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~-------------------------- 289 (479)
|+.... .+..+...+. + ....+.++.+..++++|++++...++
T Consensus 72 D~~~~~------~~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDL------TYEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCC------CHHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 963111 1111111110 0 00112233344467888888732111
Q ss_pred C-----CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCC------CCCCC-C-HHHHHHHHHHHHHcCCcEEEEcc
Q 011680 290 V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV------VHYME-G-ESMRAVFESWFVHSRVDFIFAGH 356 (479)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~------~~~~~-~-~~~r~~l~~l~~~~~VdlvlsGH 356 (479)
. ....|++||++.|++. ..+.+||++|+|+..... ..+.. . ......|.+++++++++++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~---~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQL---DNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhc---CCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 0 1267899999999885 334589999999854211 11110 0 01136788899999999999999
Q ss_pred cccce
Q 011680 357 VHAYE 361 (479)
Q Consensus 357 ~H~ye 361 (479)
+|.-.
T Consensus 218 ~H~~~ 222 (239)
T TIGR03729 218 LHRRF 222 (239)
T ss_pred ccCCC
Confidence 99765
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.59 E-value=3.5e-14 Score=140.05 Aligned_cols=179 Identities=19% Similarity=0.188 Sum_probs=115.4
Q ss_pred eEEEEEecCCCC--CC-hHHHH----HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCC
Q 011680 162 YTFGIIGDLGQT--YN-SLSTL----KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 234 (479)
++|+.++|.|.. .. ....+ +.+...+||+||++||+++.+. ...++...++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~------~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE------PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC------HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 489999999998 22 23333 4444448999999999998844 55556666666644457889999999
Q ss_pred cccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEc-CeEEEEEeecCCCC----CCCHHHHHHHHHHHhhcccC
Q 011680 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY----VKYTPQWWWLREELKKVDRE 309 (479)
Q Consensus 235 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 309 (479)
||.... ....+...+.... ..+-.... ++++++++|+.... ..+..|++||++.|++....
T Consensus 75 HD~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVV-------NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCch-------HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 996421 1122222221110 01111112 67899999997642 23689999999999985322
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccc
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAY 360 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~y 360 (479)
....+|+++|||+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112567777777765444332222233456667788888 999999999976
No 24
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.56 E-value=5.5e-14 Score=123.86 Aligned_cols=116 Identities=20% Similarity=0.210 Sum_probs=85.0
Q ss_pred EEEEecCCCCCChHH-----------HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc-CCeEEc
Q 011680 164 FGIIGDLGQTYNSLS-----------TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWS 231 (479)
Q Consensus 164 f~~~gD~~~~~~~~~-----------~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v 231 (479)
|++++|+|.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 122233349999999999998765 56677777778777543 699999
Q ss_pred CCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999992
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
|+++|+|++.......... ..++.+.+++.+++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 8899999976543211111 14567889999999999999999987644
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.56 E-value=3.7e-14 Score=134.36 Aligned_cols=198 Identities=15% Similarity=0.018 Sum_probs=113.9
Q ss_pred CeEEEEEecCCCCCCh-----HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 161 PYTFGIIGDLGQTYNS-----LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
++||++++|+|..... .+.++.+.+.+||+||++||+++... ... +.+.+.+..+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~------~~~-~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSV------DVL-ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcc------hhh-HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987432 23334444459999999999998654 111 34555666665678999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEE
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 315 (479)
|+..... ..+........+.. ..+.+..++.++..+.++..... ....+++.+.+++. .+.++.|
T Consensus 74 D~~~~~~----~~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDE----ENWIEALESAGITV-----LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCch----HHHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC--CCCCCEE
Confidence 9753211 00001111111110 11234556666544444331111 12234566677654 3456889
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCee---cccCCcccccCCCCCCeEEEe
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHY---NFTSGDRYPVPDKSAPVYLTV 392 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~---~i~~g~~~~~~~~~g~~yi~~ 392 (479)
++.|.|.+.. .+.+.++|++++||+|..|...|...... ....-....+...+..+||..
T Consensus 139 ~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~ 201 (223)
T cd07385 139 LLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSR 201 (223)
T ss_pred EEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcC
Confidence 9999986321 12567899999999999997766543210 000000111233555778888
Q ss_pred CCCCC
Q 011680 393 GDGGN 397 (479)
Q Consensus 393 G~gG~ 397 (479)
|.|..
T Consensus 202 G~G~~ 206 (223)
T cd07385 202 GLGTW 206 (223)
T ss_pred CccCC
Confidence 87764
No 26
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.52 E-value=4.2e-13 Score=126.15 Aligned_cols=175 Identities=11% Similarity=0.118 Sum_probs=101.6
Q ss_pred CeEEEEEecCCCCCChHHH-HHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSLST-LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 238 (479)
+-|++++||+|......+. ++.+.+.++|+||++||+++.+. . ... +.++++.+.. ..|+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~----~-~~~---~~~~l~~l~~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA----K-SED---YAAFFRILGEAHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC----C-HHH---HHHHHHHHHhcCCceEEEcCCCChH
Confidence 4689999999964322222 22223348999999999998642 1 222 3334444332 57999999999942
Q ss_pred cCCCCCcccccc-cccccccCCcCCCCCCCCceEEEEc-CeEEEEEeecCCCC--CCCHHHH----HHHHH-HHhhcccC
Q 011680 239 FMPNMGEVIPFK-SYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY--VKYTPQW----WWLRE-ELKKVDRE 309 (479)
Q Consensus 239 ~~~~~~~~~~~~-~~~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~ 309 (479)
. ...+. .+.....+|.. .. ..+.+ ..+ |++.|+.|+....+ ...++|. +||.+ .|+.....
T Consensus 76 v------~~~l~~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 76 L------WEYLREAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred H------HHHHHHHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 0 00001 11111111221 00 11122 333 56999999965543 2344542 56533 22222112
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
..+..|+++|+|++..+..|. -...+..++++++..+++|||+|
T Consensus 146 ~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 146 KDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 345789999999998743232 13577788999999999999999
No 27
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.50 E-value=5.2e-14 Score=104.93 Aligned_cols=62 Identities=40% Similarity=0.716 Sum_probs=41.5
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEE
Q 011680 385 SAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSV 451 (479)
Q Consensus 385 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 451 (479)
++||||++|+||+.+ ..+..++|+|+++|...|||++|+|.|+|||.|+|+++.||+ |.|+|
T Consensus 1 kapVhiv~G~aG~~l---~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL---DPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc---ccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 489999999999943 346678899999999999999999999999999999999998 89987
No 28
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.49 E-value=5.5e-13 Score=134.18 Aligned_cols=93 Identities=18% Similarity=0.299 Sum_probs=65.2
Q ss_pred CCceEEEE-cCeE--EEEEeecCCCC--------C---CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCC-CCCC
Q 011680 267 NPLWYAIR-RASA--HIIVLSSYSPY--------V---KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV-VHYM 331 (479)
Q Consensus 267 ~~~yysf~-~g~v--~fi~Lds~~~~--------~---~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~-~~~~ 331 (479)
+..||+|+ .|++ ++|+||+.... . ..++|++||+++|+++. .+.+++||++|+|+.+.+. ....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 99999986521 1 24899999999999863 2457888888888875222 1100
Q ss_pred ------------CCHHHHHHHHHHHHHc-CCcEEEEcccccc
Q 011680 332 ------------EGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (479)
Q Consensus 332 ------------~~~~~r~~l~~l~~~~-~VdlvlsGH~H~y 360 (479)
.+...-.+|..+|.+| +|.++||||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0111124788999998 5889999999953
No 29
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.47 E-value=2.4e-13 Score=122.83 Aligned_cols=145 Identities=17% Similarity=0.265 Sum_probs=87.3
Q ss_pred EEEEecCCCCCChHHHH--HHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 164 FGIIGDLGQTYNSLSTL--KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l--~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
|+++||+|......... +.+.+.++|+++++||+++... ...+.. .........|++.++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~------~~~~~~---~~~~~~~~~~v~~v~GNHD~~--- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD------APRFAP---LLLALKGFEPVIYVPGNHEFY--- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc------hHHHHH---HHHhhcCCccEEEeCCCcceE---
Confidence 57899999875432221 1223348999999999997543 222221 223334568999999999952
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
-+| .+ ...||.+.. ..+++.+|+.++++ +.+||++|||
T Consensus 69 ------------~~~--~G------~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 69 ------------VRI--IG------TTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred ------------EEE--Ee------eecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 011 00 012333221 12344455544443 3689999999
Q ss_pred ccccCCCC-C--C-CCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 322 LYSSNVVH-Y--M-EGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 322 ~~~~~~~~-~--~-~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
++...... . . .....++.+..++++++|+++++||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 98654321 1 1 1224456677888889999999999997643
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.46 E-value=7.5e-13 Score=125.20 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=104.8
Q ss_pred EEEEEecCCCCCCh------------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hc
Q 011680 163 TFGIIGDLGQTYNS------------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AY 225 (479)
Q Consensus 163 ~f~~~gD~~~~~~~------------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~ 225 (479)
||++++|+|.+... ..+++++ .+.+||+||++||+++.... . ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~---~-~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNP---S-PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCC---C-HHHHHHHHHHHHHHHHCC
Confidence 68999999987431 1233333 34499999999999876431 1 334555666666654 47
Q ss_pred CCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhh
Q 011680 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (479)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 305 (479)
+|+++++||||....... ......+.. +..-.............++.+++.|++++..... ....+.++++..+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999997532110 000000100 0000000000011233344556888888754321 123344444555544
Q ss_pred cccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 306 ~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
. ......|+++|+|+.......... .......+...++|++++||.|..+.
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 3 345679999999986544321110 12233446678899999999998764
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.46 E-value=1.4e-12 Score=127.24 Aligned_cols=197 Identities=14% Similarity=0.101 Sum_probs=109.1
Q ss_pred CCCeEEEEEecCCCCCC-hHH----HHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCC
Q 011680 159 DAPYTFGIIGDLGQTYN-SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-~~~----~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~G 233 (479)
..++||++++|+|.... ... .++.+.+.+||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+|
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~G 120 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFG 120 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecC
Confidence 35799999999998632 122 233444459999999999997332 2234556677777766789999999
Q ss_pred CcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCe--EEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCC
Q 011680 234 NHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (479)
Q Consensus 234 NHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (479)
|||+..... ....+...+. ..+..-..+....+..++ +.++.++.... +... ..+.+++ .
T Consensus 121 NHD~~~~~~-----~~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~-----~ 182 (271)
T PRK11340 121 NHDRPVGTE-----KNHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA-----N 182 (271)
T ss_pred CCCcccCcc-----chHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----C
Confidence 999742210 0011111110 000001123344455443 56677753211 1100 1112221 3
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCC---cccccCCCCCCe
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSG---DRYPVPDKSAPV 388 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g---~~~~~~~~~g~~ 388 (479)
...|++.|.|-.- +.+.+.++|++||||+|.-|-..|..+.......+ ....+...+..+
T Consensus 183 ~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l 245 (271)
T PRK11340 183 LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERQI 245 (271)
T ss_pred CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCCcEEeCCcEE
Confidence 4689999999631 12456789999999999988766643221100000 011223345567
Q ss_pred EEEeCCCC
Q 011680 389 YLTVGDGG 396 (479)
Q Consensus 389 yi~~G~gG 396 (479)
||..|-|.
T Consensus 246 ~Vs~G~G~ 253 (271)
T PRK11340 246 YTTRGVGS 253 (271)
T ss_pred EEeCCccC
Confidence 77777774
No 32
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.45 E-value=2.1e-11 Score=117.17 Aligned_cols=255 Identities=19% Similarity=0.281 Sum_probs=135.0
Q ss_pred CCCeEEEEEecCCCCCC--------------------hHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN--------------------SLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR 217 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~ 217 (479)
+.+||++.++|+|.+.. ....++++++. +||+|+++||+++... . +..-..++.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~--t---~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS--T---QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc--c---HhHHHHHHH
Confidence 46799999999988643 12335565555 9999999999998844 1 222334566
Q ss_pred HHHHHh-hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC--CCCCCceE-EEEcCe----------------
Q 011680 218 FIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--KSTNPLWY-AIRRAS---------------- 277 (479)
Q Consensus 218 ~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--~~~~~~yy-sf~~g~---------------- 277 (479)
.++|.. ..+||.+++||||-+..-. ......+.. .+|..-+ ...++.-| -..+|+
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~lt---r~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLT---RLQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccC---HHHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 677764 5899999999999532210 000001110 1222111 00011111 111111
Q ss_pred --EEEEEeecCCC---------CC-CCHHHHHHHHHHHhhc---ccCCCC-eEEEEeccccc--ccCCCC------CCC-
Q 011680 278 --AHIIVLSSYSP---------YV-KYTPQWWWLREELKKV---DREKTP-WLIVLMHVPLY--SSNVVH------YME- 332 (479)
Q Consensus 278 --v~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~IV~~H~P~~--~~~~~~------~~~- 332 (479)
..+++||+..+ |+ ..+.|++||+..-++- +..-.| .-+++.|.|+- ..-... ..+
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 23456665432 11 2478999999887331 111123 46788899972 211110 011
Q ss_pred --CHHHHHHHHHHHH-HcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCC
Q 011680 333 --GESMRAVFESWFV-HSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQ 409 (479)
Q Consensus 333 --~~~~r~~l~~l~~-~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~ 409 (479)
......-+...|. +.+|++|++||+|.-....+ -++.+++-=|+|+..-+ + .+
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~------------------~k~~~wlCygGgaGygg----Y--g~ 336 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE------------------LKGELWLCYGGGAGYGG----Y--GI 336 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEeccccccceecc------------------cCCeEEEEecCCCccCC----c--Cc
Confidence 1112234555565 78899999999998776543 23446666544432211 1 12
Q ss_pred CCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEE
Q 011680 410 PNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVF 453 (479)
Q Consensus 410 p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 453 (479)
+.|-. +--+++++....---+|.|.+|+...+.|.-.|
T Consensus 337 ~gw~R------r~Rv~e~d~~~~~IkTWKRl~d~~~~~~D~q~l 374 (379)
T KOG1432|consen 337 GGWER------RARVFELDLNKDRIKTWKRLDDKPLSVIDYQLL 374 (379)
T ss_pred CCccc------ceEEEEccccccccceeeecCCCCcceeeeEEE
Confidence 33421 224455543222233789987776545565443
No 33
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.36 E-value=7.7e-12 Score=106.83 Aligned_cols=116 Identities=22% Similarity=0.234 Sum_probs=83.9
Q ss_pred EEEecCCCCCChHHHHH---HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 165 GIIGDLGQTYNSLSTLK---HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~---~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
+++||+|.+........ ...+.++|+||++||+++... ...+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGP------DPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCC------CchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899988765443332 233349999999999999766 3333333323333456899999999999
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
++.............+..+..++.+.+++++|+||.|.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 9766543222222257788889999999999999999999874
No 34
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.21 E-value=9.9e-11 Score=111.38 Aligned_cols=163 Identities=15% Similarity=0.130 Sum_probs=104.3
Q ss_pred EEEEEecCCCCCChHHHHHHHH----HhCCCEEEEcCcccccCCCC-----------------CCc---hhhhHHHH--H
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYM----QSGGQSVLFLGDLSYADRYE-----------------YND---VGIRWDSW--G 216 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~----~~~pD~vl~~GDl~y~~~~~-----------------~~~---~~~~~~~~--~ 216 (479)
+|++.||.+...........+. +.+||++|++||.+|++... ... +...+..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999988766666666665 56999999999999998621 011 22223332 2
Q ss_pred HHHHHHhhcCCeEEcCCCcccccCCCCCc-------------ccccccccccccCCcCCCC--CCCCceEEEEcCeE-EE
Q 011680 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGE-------------VIPFKSYLHRIATPYTASK--STNPLWYAIRRASA-HI 280 (479)
Q Consensus 217 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-------------~~~~~~~~~~f~~P~~~~~--~~~~~yysf~~g~v-~f 280 (479)
..++.+.+.+|++.+|++||+..+..... ....++|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 33567778999999999999865432210 0111233333332222221 23568999999996 99
Q ss_pred EEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccc
Q 011680 281 IVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVH 358 (479)
Q Consensus 281 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H 358 (479)
|+||+.... ..+......|+.+..++.+.+ -.++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998652 222334556777777765554 3488999999
Q ss_pred cceee
Q 011680 359 AYERS 363 (479)
Q Consensus 359 ~yer~ 363 (479)
..+-.
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 76643
No 35
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.20 E-value=1.2e-10 Score=101.56 Aligned_cols=116 Identities=18% Similarity=0.176 Sum_probs=74.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC-eEEcCCCcccccCC
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP-WIWSAGNHEIEFMP 241 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P-~~~v~GNHD~~~~~ 241 (479)
||+++||+|.... .+...++|+++++||+++... ...++.+.+.++.+ ..| +++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~--~~~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSL--PHPHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhC--CCCeEEEEECCCCCcC--
Confidence 5899999997644 222238999999999987543 33344444444443 233 578999999410
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEeccc
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P 321 (479)
. . ..+.|+++|.|
T Consensus 65 --------~------------------------------------------------------~-----~~~~ilv~H~~ 77 (135)
T cd07379 65 --------D------------------------------------------------------P-----EDTDILVTHGP 77 (135)
T ss_pred --------C------------------------------------------------------C-----CCCEEEEECCC
Confidence 0 1 13568889999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 322 ~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
++............-.+.+.+++.+.+++++++||+|...
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 9765432211111112456667788899999999999864
No 36
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.16 E-value=4.7e-10 Score=109.36 Aligned_cols=85 Identities=16% Similarity=0.052 Sum_probs=62.1
Q ss_pred EEECCCCCCCCCCeEEEEEecCCCCCChH---HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc
Q 011680 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSL---STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 149 ~F~T~p~~~~~~~~~f~~~gD~~~~~~~~---~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (479)
.-.++..+....+++++.++|+|...... +.+..+....||+|+++||+++... ......+...++++.+.
T Consensus 32 ~i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~ 105 (284)
T COG1408 32 TILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAP 105 (284)
T ss_pred EeecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhcc
Confidence 33444444345789999999999875542 2233444448899999999998522 44556777888888889
Q ss_pred CCeEEcCCCccccc
Q 011680 226 QPWIWSAGNHEIEF 239 (479)
Q Consensus 226 ~P~~~v~GNHD~~~ 239 (479)
.++++++||||+..
T Consensus 106 ~gv~av~GNHd~~~ 119 (284)
T COG1408 106 LGVFAVLGNHDYGV 119 (284)
T ss_pred CCEEEEeccccccc
Confidence 99999999999853
No 37
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.14 E-value=1.9e-10 Score=105.07 Aligned_cols=106 Identities=23% Similarity=0.304 Sum_probs=69.1
Q ss_pred CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh---hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC
Q 011680 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263 (479)
Q Consensus 187 ~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~ 263 (479)
+||+|+++||+++.+... + ..+|.+..+.+.++. ..+|++.++||||+..... .....-.+||.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~--~-~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~----~~~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIA--N-DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE----DPIESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCC--C-HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC----CcCHHHHHHHH------
Confidence 999999999999987732 2 334444333333332 3689999999999853211 01011122331
Q ss_pred CCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHH
Q 011680 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESW 343 (479)
Q Consensus 264 ~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l 343 (479)
.+ | |+++|.|+..... ..+..+
T Consensus 109 -----~~------------------------------------------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -----KY------------------------------------------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -----Hh------------------------------------------h-eeeeccccccccc----------HHHHHH
Confidence 00 0 9999999976432 155677
Q ss_pred HHHcCCcEEEEcccccceee
Q 011680 344 FVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 344 ~~~~~VdlvlsGH~H~yer~ 363 (479)
+.+++++++|+||.|.+...
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHhcCceEEEEcCccceeeE
Confidence 88899999999999987754
No 38
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.14 E-value=5.2e-10 Score=99.44 Aligned_cols=154 Identities=19% Similarity=0.269 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccC
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 240 (479)
.||+++||+|..... .+.++.+ +++|+|+++||+++. .++.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~-- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNW-- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHST--
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCcccc--
Confidence 489999999986332 1233333 389999999998752 3344444433 999999999942
Q ss_pred CCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEecc
Q 011680 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320 (479)
Q Consensus 241 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~ 320 (479)
.+....... + +.+.+.. .-....|+++|.
T Consensus 61 ----------~~~~~~~~~----------~----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 61 ----------AFPNENDEE----------Y----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp ----------HHHSEECTC----------S----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred ----------cchhhhhcc----------c----------------------------cccceee---eecCCeEEEECC
Confidence 111110000 0 0001110 122468888998
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCC
Q 011680 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEG 400 (479)
Q Consensus 321 P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~ 400 (479)
+.+.... . .+.+..++...+++++++||.|..+... .+++.++..|+-+....
T Consensus 90 ~~~~~~~-----~---~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------------------~~~~~~~~~Gs~~~~~~ 142 (156)
T PF12850_consen 90 HPYDVQW-----D---PAELREILSRENVDLVLHGHTHRPQVFK-------------------IGGIHVINPGSIGGPRH 142 (156)
T ss_dssp TSSSSTT-----T---HHHHHHHHHHTTSSEEEESSSSSEEEEE-------------------ETTEEEEEE-GSSS-SS
T ss_pred CCccccc-----C---hhhhhhhhcccCCCEEEcCCcccceEEE-------------------ECCEEEEECCcCCCCCC
Confidence 7765321 1 2345567779999999999999977653 24567788777664321
Q ss_pred CCCCCCCCCCCCceeeeCcccEEEEEEec
Q 011680 401 LAGRFLDPQPNYSAFREASYGHSTLEIKN 429 (479)
Q Consensus 401 ~~~~~~~~~p~~s~~~~~~~G~~~l~v~~ 429 (479)
.+ .-||++|++.+
T Consensus 143 ---------------~~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 143 ---------------GD-QSGYAILDIED 155 (156)
T ss_dssp ---------------SS-SEEEEEEEETT
T ss_pred ---------------CC-CCEEEEEEEec
Confidence 01 35888988854
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.08 E-value=3.2e-09 Score=100.25 Aligned_cols=178 Identities=16% Similarity=0.117 Sum_probs=91.2
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCC
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 241 (479)
+|++++||+|..... .....+.+.+||+||++||+++. .. .+.+.+..+ ..|+++++||||.....
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~--------~~---~~~~~l~~l--~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE--------SV---QLVRAISSL--PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC--------hH---HHHHHHHhC--CCCeEEEcCCCcccccc
Confidence 589999999965332 22334444599999999999842 11 122333322 47999999999975432
Q ss_pred CCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC----------------CC--CCHHHHHHHHHHH
Q 011680 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP----------------YV--KYTPQWWWLREEL 303 (479)
Q Consensus 242 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~----------------~~--~~~~Q~~WL~~~L 303 (479)
.. ...+..+......-.. ..-.|-..++....+.++.+... |+ ..++-.+.+-+.+
T Consensus 67 ~~--~~k~~~l~~~L~~lg~----~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~ 140 (238)
T cd07397 67 TF--RKKGDRVQEQLELLGD----LHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAA 140 (238)
T ss_pred cc--cchHHHHHHHHHHhCC----cEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 10 0011112211111100 00001112222223333333211 11 1123334444444
Q ss_pred hhcccCCCCeEEEEecccccccCCCC---------C----CCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 304 KKVDREKTPWLIVLMHVPLYSSNVVH---------Y----MEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 304 ~~~~~~~~~w~IV~~H~P~~~~~~~~---------~----~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
+.+ ....-.|++.|.++...++.. . -...++.+++..+-.+-.++++++||.|.--
T Consensus 141 ~~~--~~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l 209 (238)
T cd07397 141 KKA--PPDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRL 209 (238)
T ss_pred hhc--CCCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcc
Confidence 332 223336888999997654211 0 0245677777665544568999999999753
No 40
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.06 E-value=1.2e-09 Score=99.00 Aligned_cols=56 Identities=30% Similarity=0.493 Sum_probs=36.7
Q ss_pred HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-------hcCCeEEcCCCcccc
Q 011680 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-------AYQPWIWSAGNHEIE 238 (479)
Q Consensus 180 l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~ 238 (479)
+..+.+. +||+||++||+++.... .. ...|.+..+.+..+. ...|+++++||||+.
T Consensus 37 ~~~~i~~~~pd~vi~lGDl~d~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 37 FKTALQRLKPDVVLFLGDLFDGGRI--AD-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHhcCCCEEEEeccccCCcEe--CC-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 3344434 99999999999986541 11 234554444444432 168999999999974
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.03 E-value=2.9e-09 Score=102.20 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=92.5
Q ss_pred EEEEEecCCCCCChHH----HHHHHHH--hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc-CCeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLS----TLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~----~l~~~~~--~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 235 (479)
+++++||+|.+..... .++.+.. .+||+|+++||+++.-...... ........+.++.+... +|++.++|||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 7899999998754332 2233322 3899999999999741100001 12223445566666544 8999999999
Q ss_pred ccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEE
Q 011680 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (479)
Q Consensus 236 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 315 (479)
|.... ..+.+...+.. -.....+++++.++++.-.... ...+..++++.+.+.. +|.+
T Consensus 81 D~~~~---------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~~r~------~~~~ 138 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRKVRN------PWLQ 138 (241)
T ss_pred chhhh---------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCccc-ccCCHHHHHHHHHHhC------HHHH
Confidence 96321 11111111100 0112346667777666654321 1123444445444443 1222
Q ss_pred EEecccccccCC------------CCC---CC-CHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 316 VLMHVPLYSSNV------------VHY---ME-GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 316 V~~H~P~~~~~~------------~~~---~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.++|.+++.... ... .. .....+.+.+++.+++++++++||+|.-..
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 223333321100 000 00 001124577888899999999999997654
No 42
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=99.00 E-value=5e-09 Score=108.25 Aligned_cols=179 Identities=18% Similarity=0.181 Sum_probs=107.2
Q ss_pred HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHH---HHHHHHHHHhhcCCeEEcCCCcccccCCCCC----ccc-
Q 011680 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWD---SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG----EVI- 247 (479)
Q Consensus 178 ~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~---~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----~~~- 247 (479)
.+|++|.++ ++|+|+++||++-.+.|.... +...+ ...+.+......+|+++++||||.-...... ...
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 356666666 599999999999877654322 22222 2334455556789999999999974321110 000
Q ss_pred ----cccccccccc--CCcCCC-CCCCCceEE-EEcCeEEEEEeecCCCCC----------CCHHHHHHHHHHHhhcccC
Q 011680 248 ----PFKSYLHRIA--TPYTAS-KSTNPLWYA-IRRASAHIIVLSSYSPYV----------KYTPQWWWLREELKKVDRE 309 (479)
Q Consensus 248 ----~~~~~~~~f~--~P~~~~-~~~~~~yys-f~~g~v~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~ 309 (479)
.|..+...|. +|.... ....+.+|. ..+++.++|+||+...+. .-..|++|+..+|.+++ +
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae-~ 356 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE-S 356 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH-h
Confidence 0111111111 332211 112344554 456889999999975422 23778999999999875 3
Q ss_pred CCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcccccceee
Q 011680 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (479)
Q Consensus 310 ~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~yer~ 363 (479)
+..-+=|+.|.|+-... . .+.....+-.++.++. +...|.||.|.-+..
T Consensus 357 ~GekVhil~HIPpG~~~---c--~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 357 AGEKVHILGHIPPGDGV---C--LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred cCCEEEEEEeeCCCCcc---h--hhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 44557788999984311 1 1122345555666664 556899999986643
No 43
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.99 E-value=2.3e-09 Score=95.75 Aligned_cols=48 Identities=23% Similarity=0.399 Sum_probs=33.4
Q ss_pred CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh---cCCeEEcCCCccc
Q 011680 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA---YQPWIWSAGNHEI 237 (479)
Q Consensus 187 ~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~ 237 (479)
+||+|+++||+++..... . ...|..+...+..+.+ ..|+++++||||.
T Consensus 38 ~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCc
Confidence 999999999999765411 1 3445554444444332 5799999999996
No 44
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.96 E-value=4.9e-09 Score=95.93 Aligned_cols=177 Identities=17% Similarity=0.212 Sum_probs=84.1
Q ss_pred CeEEEEEecCCCCCChHHHH-HHHHHhCCCEEEEcCcccccCCCCCCchhhhHH--------------------------
Q 011680 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWD-------------------------- 213 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l-~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~-------------------------- 213 (479)
+-++++++|.+...+..+.+ ..+....||+|+++||+.-... . ...|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a----~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA----R-SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH----H-HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch----h-hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 35899999996543322222 2233349999999999986533 1 33333
Q ss_pred HHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccc-ccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC-CCC
Q 011680 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPF-KSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP-YVK 291 (479)
Q Consensus 214 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~-~~~ 291 (479)
.|++.+.. ..+|.+++|||||-.. ..-+ .+|....-.|.-- . -..-+.+.-|...|+.+..+.. ...
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~------~~~lr~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~ 148 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPE------RFFLREAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQR 148 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SH------HHHHHHHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-
T ss_pred HHHHHHHh--cCCcEEEecCCCCchH------HHHHHHHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCc
Confidence 33333332 3789999999999410 0000 1222111122100 0 0012223345577777765321 110
Q ss_pred --------CHHHHHHHHHHHhhcccCCCCeEEEEecccc-cccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 292 --------YTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 292 --------~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~-~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.....+|..+.|..+ +..-+|+++|.|+ +..+..+.+ .+.+..++++++.+++||||.|--.
T Consensus 149 ~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 149 EEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred cccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 022344555566664 3446788899999 444333322 3577889999999999999999654
No 45
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.96 E-value=5.6e-09 Score=93.04 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
|++++||+|... ..+..+.+. ++|.|+++||+++... ... +....|++.|.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~------~~~----------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGP------LNE----------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCccccccc------cch----------hhcCCcEEEEeCCCCC
Confidence 589999999653 344444443 4999999999987644 111 2346799999999995
No 46
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.94 E-value=5.6e-08 Score=89.41 Aligned_cols=176 Identities=16% Similarity=0.156 Sum_probs=102.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcCCeEEcCCCcccc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWSAGNHEIE 238 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~~ 238 (479)
.+|+++++|+|........+..+.+. ++|+++.+||++|..-- + ...-.+-. .++.+. ..+|+++++||-|-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~---~-~~~~~~~~-~~e~l~~~~~~v~avpGNcD~~ 77 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFG---P-KEVAEELN-KLEALKELGIPVLAVPGNCDPP 77 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcC---c-hHHHHhhh-HHHHHHhcCCeEEEEcCCCChH
Confidence 57999999999876555555444444 99999999999943221 1 11111100 034444 478999999998842
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCC--CC----CCCHHH-HHHHHHHHhhcccCCC
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS--PY----VKYTPQ-WWWLREELKKVDREKT 311 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~--~~----~~~~~Q-~~WL~~~L~~~~~~~~ 311 (479)
.- .... ....... .+ .+.+++++.|+.+.... .+ .-.+++ +.-|++-+++++ .
T Consensus 78 ~v--------~~~l-~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~---~ 137 (226)
T COG2129 78 EV--------IDVL-KNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD---N 137 (226)
T ss_pred HH--------HHHH-Hhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc---C
Confidence 10 0011 1111110 01 45777888887754321 11 112333 344444454432 1
Q ss_pred CeEEEEecccccccCCCCCCCC--HHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEG--ESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~--~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.-+|+++|+|+|.....- ..+ -.-...+..++++.++.+.+|||.|-+.-
T Consensus 138 ~~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 138 PVNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred cceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 112999999999765542 111 11246778889999999999999998543
No 47
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.85 E-value=6.7e-09 Score=94.87 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=36.1
Q ss_pred HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHH-HHHHHHHh-------------------hcCCeEEcCCCccc
Q 011680 179 TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSW-GRFIEQSA-------------------AYQPWIWSAGNHEI 237 (479)
Q Consensus 179 ~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~-~~~~~~l~-------------------~~~P~~~v~GNHD~ 237 (479)
++..+... +||.|+++||+.+. ++. . +.+|... .++.+.+. ..+|++.++||||+
T Consensus 35 ~~~~~~~~l~Pd~V~fLGDLfd~-~w~--~-D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 35 IVSMMQFWLKPDAVVVLGDLFSS-QWI--D-DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred HHHHHHHhcCCCEEEEeccccCC-Ccc--c-HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 34444444 99999999999976 442 2 4445432 23322221 14789999999998
Q ss_pred cc
Q 011680 238 EF 239 (479)
Q Consensus 238 ~~ 239 (479)
.+
T Consensus 111 G~ 112 (193)
T cd08164 111 GY 112 (193)
T ss_pred CC
Confidence 54
No 48
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.84 E-value=7e-07 Score=81.52 Aligned_cols=166 Identities=16% Similarity=0.159 Sum_probs=94.3
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHH-hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNS---LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~~l~~~~~-~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
+++++||+|.+... ...+.++.+ .++|.|+++||+++. . ..+.++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~---------~----~~~~l~~~--~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK---------E----TYDYLKTI--APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH---------H----HHHHHHhh--CCceEEEECCCCcc
Confidence 47899999965432 223444444 379999999999752 1 12233332 24799999999941
Q ss_pred cCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcccCCCCeEEEEe
Q 011680 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~ 318 (479)
+.+|. ...+++++ ++|.++
T Consensus 66 -----------------~~lp~---------~~~~~~~g-----------------------------------~~i~l~ 84 (178)
T cd07394 66 -----------------LNYPE---------TKVITVGQ-----------------------------------FKIGLI 84 (178)
T ss_pred -----------------ccCCC---------cEEEEECC-----------------------------------EEEEEE
Confidence 02331 11222222 456666
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCC
Q 011680 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQ 398 (479)
Q Consensus 319 H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~ 398 (479)
|--.+.... . .+.+..++.+.++|++++||+|.-.... .++..++-.|+.|.+
T Consensus 85 HG~~~~~~~-----~---~~~~~~~~~~~~~dvii~GHTH~p~~~~-------------------~~g~~viNPGSv~~~ 137 (178)
T cd07394 85 HGHQVVPWG-----D---PDSLAALQRQLDVDILISGHTHKFEAFE-------------------HEGKFFINPGSATGA 137 (178)
T ss_pred ECCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCCCcceEEE-------------------ECCEEEEECCCCCCC
Confidence 632221110 1 1234445667889999999999754322 235677777887754
Q ss_pred CCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCC
Q 011680 399 EGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGN 444 (479)
Q Consensus 399 ~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 444 (479)
.... . . .....|++|++.++ ...+++++-.+++
T Consensus 138 ~~~~-~---~--------~~~~syail~~~~~-~~~~~~~~l~~~~ 170 (178)
T cd07394 138 FSPL-D---P--------NVIPSFVLMDIQGS-KVVTYVYQLIDGE 170 (178)
T ss_pred CCCC-C---C--------CCCCeEEEEEecCC-eEEEEEEEEECCc
Confidence 2110 0 0 11237788998554 4677777655555
No 49
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.84 E-value=3.6e-08 Score=95.24 Aligned_cols=175 Identities=17% Similarity=0.121 Sum_probs=89.0
Q ss_pred eEEEEEecCCCCC------ChH----HHHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTY------NSL----STLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~------~~~----~~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 230 (479)
++|++++|+|... ... ..++++.+.++| +++.+||++...... .+......++.+..--.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~------~~~~~~~~~~~l~~~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPS------TATKGEANIELMNALGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccch------hccCCcHHHHHHHhcCCCEE
Confidence 5899999999543 222 334455555788 789999998765421 11111122222222235567
Q ss_pred cCCCcccccCCCCCcccccccccccccCCc-------CC---CCCCCCceEEEEcCeEE--EEEeecCCC--C-----CC
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------TA---SKSTNPLWYAIRRASAH--IIVLSSYSP--Y-----VK 291 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~~---~~~~~~~yysf~~g~v~--fi~Lds~~~--~-----~~ 291 (479)
++||||++.... .+.........|. .. .......|..++.++++ |+.+.+... + ..
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999864321 1111111111110 00 00111235567778755 444443221 0 00
Q ss_pred ---CHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 292 ---YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 292 ---~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
.....+.+++..+. .+.+...+|++.|.+... . ..+...+ .++|++|+||.|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~--------~----~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD--------D----EELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc--------h----HHHHhcC--CCccEEEcCCcCcccC
Confidence 01223334332222 125678999999988642 1 1111112 6899999999998654
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.84 E-value=1.3e-07 Score=90.11 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=46.4
Q ss_pred EEEecCCCCCChH----HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCccc
Q 011680 165 GIIGDLGQTYNSL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEI 237 (479)
Q Consensus 165 ~~~gD~~~~~~~~----~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~ 237 (479)
+++||+|.+.... ..++.+.+. +||+|+++||+++.-...... ....+.+.+.++.+.. ..|+++++||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~-~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDP-STLARSVAQAIRQVSDQGVPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCC-CHHHHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 6899999875422 234444443 799999999999731100001 2222345556666654 5899999999996
Q ss_pred c
Q 011680 238 E 238 (479)
Q Consensus 238 ~ 238 (479)
.
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 3
No 51
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.82 E-value=2.5e-07 Score=94.60 Aligned_cols=108 Identities=12% Similarity=0.079 Sum_probs=59.5
Q ss_pred CeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEE
Q 011680 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLT 391 (479)
Q Consensus 312 ~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~ 391 (479)
.+.|++.|+........ ... -+.++ ..++|+|+.||.|.-+.. |.. .+....+|+
T Consensus 201 ~fnIlv~Hq~~~~~~~~-----~~i---pe~ll-p~~fDYValGHiH~~~~~-p~~---------------~~~~~~~V~ 255 (405)
T TIGR00583 201 WFNLLVLHQNHAAHTST-----SFL---PESFI-PDFFDLVIWGHEHECLPD-PVY---------------NPSDGFYVL 255 (405)
T ss_pred ceEEEEeCceecCCCCc-----ccC---chhhh-hccCcEEEeccccccccc-ccc---------------cCCCCceEE
Confidence 35799999986322111 011 12333 457999999999975432 111 122223444
Q ss_pred eCCCCCCCCCCCCCCCCCCCCceeeeCcccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEeC
Q 011680 392 VGDGGNQEGLAGRFLDPQPNYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHNQ 456 (479)
Q Consensus 392 ~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 456 (479)
- +|+.+.. .+.+ -....-|+..|+|.. ....++++.-+...+.+..++.+...
T Consensus 256 y--pGS~v~t--Sf~e-------~E~~~Kgv~lVeI~~-~~~~~~~IpL~~vRpf~~~~i~l~~~ 308 (405)
T TIGR00583 256 Q--PGSTVAT--SLTP-------GEALPKHVFILNIKG-RKFASKPIPLQTVRPFVMKEILLDKV 308 (405)
T ss_pred E--CCCcccc--cccc-------cccCCCEEEEEEEcC-CeeEEEEeeCCCcccEEEEEEEhhhc
Confidence 1 2333321 1110 011246899999964 45788888765567777778877764
No 52
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.76 E-value=3e-08 Score=85.59 Aligned_cols=50 Identities=18% Similarity=0.129 Sum_probs=32.6
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
.+|+++|+|++........ ...-.+.+.+++.+++++++|+||+|.....
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDF-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred cCEEEECCCCCcCcCcccc-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3578889888643321100 1112456677888899999999999975543
No 53
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.76 E-value=1.4e-07 Score=84.36 Aligned_cols=61 Identities=16% Similarity=0.089 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCChHHHH-HHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSLSTL-KHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l-~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||+|......+.+ +.+... ++|.|+++||++. .. ..+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~---------~~----~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS---------PF----VLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC---------HH----HHHHHHHh--CCceEEEccCCCc
Confidence 3799999999764433333 334444 8999999999982 11 22233322 4589999999994
No 54
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.75 E-value=4.3e-07 Score=89.05 Aligned_cols=183 Identities=14% Similarity=0.074 Sum_probs=90.7
Q ss_pred eEEEEEecCCCCC-------------Ch----HHHHHHHHHhCCCEEEE-cCcccccCCCCCCchh-----hhHHHHHHH
Q 011680 162 YTFGIIGDLGQTY-------------NS----LSTLKHYMQSGGQSVLF-LGDLSYADRYEYNDVG-----IRWDSWGRF 218 (479)
Q Consensus 162 ~~f~~~gD~~~~~-------------~~----~~~l~~~~~~~pD~vl~-~GDl~y~~~~~~~~~~-----~~~~~~~~~ 218 (479)
++|++++|+|... .. ...++++.+.+++.+++ +||++...... ++. .......+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~--~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLA--DYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHH--HHhhhcccCCCChHHHH
Confidence 4788888887531 11 12334444447888776 99998754310 000 011122333
Q ss_pred HHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC-------C-CCCCCCceEEEEcC-eEEEEEee--cCC
Q 011680 219 IEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A-SKSTNPLWYAIRRA-SAHIIVLS--SYS 287 (479)
Q Consensus 219 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~-~~~~~~~yysf~~g-~v~fi~Ld--s~~ 287 (479)
+..+ . +-+.++||||+++... .+.........|.- . .......|.-++.+ ++++-++. +..
T Consensus 79 ln~~--g-~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 79 MNAL--G-YDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred HHhc--C-CCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 3332 2 3467889999864321 11111111112210 0 00112346667888 86554444 321
Q ss_pred C--CC-----------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEE
Q 011680 288 P--YV-----------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIF 353 (479)
Q Consensus 288 ~--~~-----------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~Vdlvl 353 (479)
. +. ...+..++..++|++ .++..+|+++|.+....... ....+ .....+.++ .+||++|
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~-~~~~~---~~~~~la~~~~~vD~Il 223 (277)
T cd07410 151 IPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEE-SLTGE---NAAYELAEEVPGIDAIL 223 (277)
T ss_pred cccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccc-ccCCc---cHHHHHHhcCCCCcEEE
Confidence 1 00 012234455555554 46789999999987543210 01111 112233444 5899999
Q ss_pred Ecccccce
Q 011680 354 AGHVHAYE 361 (479)
Q Consensus 354 sGH~H~ye 361 (479)
+||.|...
T Consensus 224 gGHsH~~~ 231 (277)
T cd07410 224 TGHQHRRF 231 (277)
T ss_pred eCCCcccc
Confidence 99999754
No 55
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.75 E-value=1.8e-07 Score=82.28 Aligned_cols=155 Identities=24% Similarity=0.239 Sum_probs=83.3
Q ss_pred HHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCccccccccccc
Q 011680 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHR 255 (479)
Q Consensus 178 ~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 255 (479)
++-++.... .=|.|++.||++.+...+ +-.+=++++..+ .---+.+.||||+.+... ...++.
T Consensus 32 kI~k~W~~~v~~eDiVllpGDiSWaM~l~------ea~~Dl~~i~~L--PG~K~m~rGNHDYWw~s~-------skl~n~ 96 (230)
T COG1768 32 KIKKHWRSKVSPEDIVLLPGDISWAMRLE------EAEEDLRFIGDL--PGTKYMIRGNHDYWWSSI-------SKLNNA 96 (230)
T ss_pred HHHHHHHhcCChhhEEEecccchhheech------hhhhhhhhhhcC--CCcEEEEecCCccccchH-------HHHHhh
Confidence 333444443 458999999999876521 111223444333 112477999999864311 111111
Q ss_pred ccCCcCCCCCCCCceE---EEEcCeEEEEEe---ecC-CCCCCCHHH--------HHHHHHHHhhcccCCCCeEEEEecc
Q 011680 256 IATPYTASKSTNPLWY---AIRRASAHIIVL---SSY-SPYVKYTPQ--------WWWLREELKKVDREKTPWLIVLMHV 320 (479)
Q Consensus 256 f~~P~~~~~~~~~~yy---sf~~g~v~fi~L---ds~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~IV~~H~ 320 (479)
+|.. .+| .|.++++.++.. ++. .++...++| +.-|+..+.++-++...-.|||.|.
T Consensus 97 --lp~~-------l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HY 167 (230)
T COG1768 97 --LPPI-------LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHY 167 (230)
T ss_pred --cCch-------HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEec
Confidence 1110 111 144455444332 222 122223333 2334332222223455678999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 321 P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
|+++..... ..+.+++++++|+.++.||.|--.|-.
T Consensus 168 PP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 168 PPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred CCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCC
Confidence 999765432 245567889999999999999888754
No 56
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.70 E-value=4.3e-07 Score=88.00 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCC-------hHH----HHHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeE
Q 011680 162 YTFGIIGDLGQTYN-------SLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~~~----~l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 229 (479)
++++.+.|.|.-.. ... .++++.+.+++ ++|.+||++...... + ..+.+...+.+..+ -.-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l---~~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL---GVDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc---CCcE
Confidence 47788888873110 122 33444444677 999999998654311 1 11112233333332 2346
Q ss_pred EcCCCcccccCCCCCcccccccccccccCCcC----------CCCCCCCceEEEEcCeEE--EEEeecCCCC------C-
Q 011680 230 WSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT----------ASKSTNPLWYAIRRASAH--IIVLSSYSPY------V- 290 (479)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----------~~~~~~~~yysf~~g~v~--fi~Lds~~~~------~- 290 (479)
.++||||++.... .+.........|.- ..-..-..|.-++.++++ ||.+.+.... .
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 7899999854321 11111111111110 000012457778888855 4555443211 0
Q ss_pred --CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 291 --KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 291 --~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
....-.+.+++.+++..+.++.-+|++.|.+... .. .+.++ .++|++|+||.|..+
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0122233344444332235788999999997521 11 12222 479999999999866
No 57
>PRK09453 phosphodiesterase; Provisional
Probab=98.67 E-value=1.5e-06 Score=79.72 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCChH-HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~-~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||+|...... ..++.+.+.++|.++++||+++.+............+..+.++.+ ..+++.+.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 3799999999653222 233344445899999999998643210000000112223333322 3589999999994
No 58
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.65 E-value=1.4e-07 Score=88.90 Aligned_cols=184 Identities=12% Similarity=0.011 Sum_probs=88.7
Q ss_pred EEEecCCCCCChH---HHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHH-HHHHHHHHhhcCCeEEcCCCcc
Q 011680 165 GIIGDLGQTYNSL---STLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 165 ~~~gD~~~~~~~~---~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 236 (479)
+++||+|.+.... ..+..+.+ .++|.++++||+++.-............. +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999875432 22333333 38999999999997422111010111111 2334444456789999999999
Q ss_pred cccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCCCCCCHHHHHHHHHHHhhcc------cCC
Q 011680 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVD------REK 310 (479)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~------~~~ 310 (479)
.... . .+......... ......+.+++.+++++-.... ........|+...+.... ...
T Consensus 81 ~~~~-------~--~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (217)
T cd07398 81 FLLG-------D--FFAEELGLILL-----PDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRLGRNPYDQLLFLNRP 145 (217)
T ss_pred HHHH-------h--HHHHHcCCEEe-----ccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHHhCcHHHHHHHhcch
Confidence 6421 0 11111100000 0112146778888888776532 233344444444322100 000
Q ss_pred CCeEEEEeccccccc-----CCCC-CCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 311 TPWLIVLMHVPLYSS-----NVVH-YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 311 ~~w~IV~~H~P~~~~-----~~~~-~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
..+..-+.......+ .... ........+.+..++.+++++++++||+|.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 146 LNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000000000000 0000 0012233556667778899999999999987654
No 59
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.56 E-value=2.6e-06 Score=82.87 Aligned_cols=156 Identities=16% Similarity=0.109 Sum_probs=77.7
Q ss_pred HHHHHHHh-CCCEE-EEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccc
Q 011680 179 TLKHYMQS-GGQSV-LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRI 256 (479)
Q Consensus 179 ~l~~~~~~-~pD~v-l~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f 256 (479)
.++++.+. ++|.+ +.+||+....... . ........+.+. ..++.++.||||+++... .+....+.+
T Consensus 41 ~v~~~~~~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~~~~l~----~~g~da~~GNHefd~g~~-----~l~~~~~~~ 108 (264)
T cd07411 41 LIKRIRAERNPNTLLLDGGDTWQGSGEA--L-YTRGQAMVDALN----ALGVDAMVGHWEFTYGPE-----RVRELFGRL 108 (264)
T ss_pred HHHHHHHhcCCCeEEEeCCCccCCChHH--h-hcCChhHHHHHH----hhCCeEEecccccccCHH-----HHHHHHhhC
Confidence 34555555 78877 5699999664410 0 111122223332 355555559999864321 112122222
Q ss_pred cCCcCCC-------C-CCCCceEEEEcCeE--EEEEeecCCCCC-------C---CHHHHHHHHHHHhhcc-cCCCCeEE
Q 011680 257 ATPYTAS-------K-STNPLWYAIRRASA--HIIVLSSYSPYV-------K---YTPQWWWLREELKKVD-REKTPWLI 315 (479)
Q Consensus 257 ~~P~~~~-------~-~~~~~yysf~~g~v--~fi~Lds~~~~~-------~---~~~Q~~WL~~~L~~~~-~~~~~w~I 315 (479)
.+|.-.+ + ..-..|.-++.+++ -||.+.+..... . .....+.+++.+++.. ..++..+|
T Consensus 109 ~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI 188 (264)
T cd07411 109 NWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVV 188 (264)
T ss_pred CCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEE
Confidence 2221000 0 01123556778875 455555432100 0 1233445555433321 25678999
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
++.|.+... .. .+.++ .+||++|+||.|...
T Consensus 189 ~l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 189 LLSHNGLPV--------DV-------ELAERVPGIDVILSGHTHERT 220 (264)
T ss_pred EEecCCchh--------hH-------HHHhcCCCCcEEEeCcccccc
Confidence 999987531 11 12222 579999999999643
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.53 E-value=1.9e-06 Score=83.32 Aligned_cols=182 Identities=18% Similarity=0.163 Sum_probs=96.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHHh---CCCEEEEcCcccccCCCCCCchh--------hhHHHHHHHHHHHh-hcCCeEE
Q 011680 164 FGIIGDLGQTYNS-LSTLKHYMQS---GGQSVLFLGDLSYADRYEYNDVG--------IRWDSWGRFIEQSA-AYQPWIW 230 (479)
Q Consensus 164 f~~~gD~~~~~~~-~~~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~--------~~~~~~~~~~~~l~-~~~P~~~ 230 (479)
|+++||.|..-.. ...++.+.+. ++|++|++||+.-... ..+.+ ..+..|...+.... ..+|+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--EADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--cchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999864221 1223334332 7999999999953322 11100 12233333333322 3567799
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCce-----EEEEcCeEEEEEeecCCC---CCC--------CHH
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW-----YAIRRASAHIIVLSSYSP---YVK--------YTP 294 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~y-----ysf~~g~v~fi~Lds~~~---~~~--------~~~ 294 (479)
+.||||.. ..+.. ++..+ ....+.+ ..+++++++|..|..... +.. .+.
T Consensus 79 i~GNHE~~-----------~~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~ 143 (262)
T cd00844 79 IGGNHEAS-----------NYLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSED 143 (262)
T ss_pred ECCCCCCH-----------HHHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHH
Confidence 99999941 11110 11100 0011222 235678899999986321 211 123
Q ss_pred HHHHHH-------HHHhhcccCCCCeEEEEecccccccCCCCCCC---------------CHHHHHHHHHHHHHcCCcEE
Q 011680 295 QWWWLR-------EELKKVDREKTPWLIVLMHVPLYSSNVVHYME---------------GESMRAVFESWFVHSRVDFI 352 (479)
Q Consensus 295 Q~~WL~-------~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~---------------~~~~r~~l~~l~~~~~Vdlv 352 (479)
++..+. ..|... ...--|+++|.|+.......... ...-...+..++.+.++..+
T Consensus 144 ~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 144 TKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 333221 112221 12346999999997654321100 00113467788999999999
Q ss_pred EEccccc-ceeeee
Q 011680 353 FAGHVHA-YERSYR 365 (479)
Q Consensus 353 lsGH~H~-yer~~p 365 (479)
|+||.|. |++..|
T Consensus 221 f~gH~H~~f~~~~~ 234 (262)
T cd00844 221 FSAHLHVKFAALVP 234 (262)
T ss_pred EEecCCcccceecC
Confidence 9999998 776654
No 61
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.45 E-value=2.4e-06 Score=82.84 Aligned_cols=182 Identities=12% Similarity=0.100 Sum_probs=87.3
Q ss_pred eEEEEEecCCCCCC-------hHHHHH----HHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTYN-------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~~~~l~----~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 230 (479)
++++.++|+|.... ....+. ++.+.+.+++|.+||++..... .. ........+.+..+ ... +.
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~--~~-~~~g~~~~~~ln~~--g~d-~~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI--SD-LDKGETIIKIMNAV--GYD-AV 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh--hh-hcCCcHHHHHHHhc--CCc-EE
Confidence 57899999986321 122233 3332257899999999865331 01 11111222222221 233 45
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCC-------CC-CCCceEEEEcC-e--EEEEEeecCCC-C----C--CC
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-------KS-TNPLWYAIRRA-S--AHIIVLSSYSP-Y----V--KY 292 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~-~~~~yysf~~g-~--v~fi~Lds~~~-~----~--~~ 292 (479)
++||||+++.. ..+..+...+.+|.-.+ +. .-..|.-++.+ + +-||.+-+... . . .+
T Consensus 75 ~~GNHefd~G~-----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGL-----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCH-----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 78999986431 11222222222231100 00 01125556777 6 45565554311 0 0 00
Q ss_pred ---HHHHHHHHHH-HhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEccccccee
Q 011680 293 ---TPQWWWLREE-LKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (479)
Q Consensus 293 ---~~Q~~WL~~~-L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer 362 (479)
..-.+-+++. ..+..+.++.-+|+++|.+....... . . ...+.. .-.++|++|.||.|....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~--~---~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W--T---STELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c--c---HHHHHH--hCCCceEEEeCCCccccc
Confidence 1112223333 22222257889999999987543210 0 1 112211 124799999999997654
No 62
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.44 E-value=1.3e-06 Score=89.96 Aligned_cols=73 Identities=18% Similarity=0.066 Sum_probs=51.1
Q ss_pred eEEEEEecCCCCC-C---------hH----HHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-hcC
Q 011680 162 YTFGIIGDLGQTY-N---------SL----STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~-~---------~~----~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~ 226 (479)
+||++++|+|.+. . .. ..++.+.+.++||||++||+.+....+ ...-..+.++++.+. ..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps----~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS----PRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC----HHHHHHHHHHHHHhccCCC
Confidence 4899999999982 1 11 234445556999999999999876521 222234556666654 479
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999963
No 63
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.44 E-value=4e-06 Score=82.67 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=35.8
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH--cCCcEEEEccccccee
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH--SRVDFIFAGHVHAYER 362 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~--~~VdlvlsGH~H~yer 362 (479)
+-+++.+++.+..+...+|+++|........... .+........++.+ .++|++|+||.|....
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 4455544443325688999999988753222110 00111112233333 4799999999998653
No 64
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.43 E-value=1.8e-06 Score=86.78 Aligned_cols=116 Identities=16% Similarity=0.137 Sum_probs=74.4
Q ss_pred CCCeEEEEEecCCCCCCh-----HHHHH---------H----HHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS-----LSTLK---------H----YMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~-----~~~l~---------~----~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
+..+|+++++|.|.-++. ...|+ + .... +||.++++||+.+++.+. + .++|.+..+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~-~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--G-DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--C-hHHHHHHHHHH
Confidence 567999999999876521 11111 1 1111 999999999999977653 2 55666543334
Q ss_pred HHHh---hcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecCCC
Q 011680 220 EQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP 288 (479)
Q Consensus 220 ~~l~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~~~ 288 (479)
+.+. .++|.+.++||||+.+....- ......|...| ++...+|+.|+..|+++|++..
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~~-~~~i~Rfe~~f----------g~~~r~f~v~~~tf~~~d~~~l 183 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNELI-PEWIDRFESVF----------GPTERRFDVGNLTFVMFDSNAL 183 (410)
T ss_pred HHhhCCCCCCeeEEeCCccccccccccc-hhHHHHHHHhh----------cchhhhhccCCceeEEeeehhh
Confidence 4443 378999999999996542211 01112333333 2245679999999999998764
No 65
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.37 E-value=6.6e-06 Score=83.04 Aligned_cols=74 Identities=18% Similarity=0.094 Sum_probs=46.8
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHH-HHHHHh-hcC
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGR-FIEQSA-AYQ 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~-~~~~l~-~~~ 226 (479)
+||+++||+|.+... ...++++ .+.+||+||++||+.+....+ . ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~--~-~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAI--T-QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCC--C-HHHHHHHHHHHHHHHHHCCC
Confidence 489999999987431 1234443 344999999999999764311 1 112222222 234443 368
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999964
No 66
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.36 E-value=4.6e-06 Score=81.90 Aligned_cols=156 Identities=15% Similarity=0.133 Sum_probs=78.4
Q ss_pred HHHHHHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccC
Q 011680 180 LKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIAT 258 (479)
Q Consensus 180 l~~~~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~ 258 (479)
++++.+.+++ ++|.+||++...... . ..+.....+.+..+ ... +.++||||+++... .+........+
T Consensus 41 v~~~r~~~~~~l~ld~GD~~~gs~~~--~-~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~ 109 (281)
T cd07409 41 VKELRAENPNVLFLNAGDAFQGTLWY--T-LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKF 109 (281)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCcchh--h-hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCC
Confidence 3444444666 566699998654311 1 11122223333322 333 55789999875421 11112111222
Q ss_pred CcCCC-----C------CCCCceEEEEcCeEE--EEEeecCCC--C-C--C---CHHHHHHHHHHHhhcccCCCCeEEEE
Q 011680 259 PYTAS-----K------STNPLWYAIRRASAH--IIVLSSYSP--Y-V--K---YTPQWWWLREELKKVDREKTPWLIVL 317 (479)
Q Consensus 259 P~~~~-----~------~~~~~yysf~~g~v~--fi~Lds~~~--~-~--~---~~~Q~~WL~~~L~~~~~~~~~w~IV~ 317 (479)
|.-.. . ..-..|.-++.++++ ||.+-+... . . . .....+.+++.+++.+..++.-+|++
T Consensus 110 p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l 189 (281)
T cd07409 110 PVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIAL 189 (281)
T ss_pred CEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 21100 0 011235667888855 455544221 0 0 1 12334556666655443567889999
Q ss_pred ecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 318 MHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 318 ~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.|...-. . . .+.++ .++|++++||.|...
T Consensus 190 ~H~G~~~--------d----~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 190 SHSGYEV--------D----K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred eccCchh--------H----H---HHHHcCCCCcEEEeCCcCccc
Confidence 9987421 0 1 12222 479999999999854
No 67
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.33 E-value=2.5e-05 Score=75.17 Aligned_cols=169 Identities=12% Similarity=0.123 Sum_probs=88.0
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~---~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
|++++||.=..... ...+..+.+. ++|++|..||++-.+. .. . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~-gl-~-----~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGK-GI-T-----PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCC-CC-C-----HHHHHHHHhc--CCC-EEEecccccC
Confidence 58899998332222 2334455444 8999999999987642 00 1 1122222221 333 4566999986
Q ss_pred cCCCCCcccccccccccc---cCCcCCC-CCCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccCCCC
Q 011680 239 FMPNMGEVIPFKSYLHRI---ATPYTAS-KSTNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTP 312 (479)
Q Consensus 239 ~~~~~~~~~~~~~~~~~f---~~P~~~~-~~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (479)
.. ....+.... -.|.+-+ ......|+-++.+++++-+++- .........-++-+++.+++.+. +++
T Consensus 71 ~g-------el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK-------EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc-------hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 111111111 0111111 1113347777888766555443 22211222224446666665432 578
Q ss_pred eEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 313 w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.+||.+|.-.. ....++.. ...-+||+++.||+|..-
T Consensus 143 ~IIV~~H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 143 IIFVDFHAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred EEEEEECCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccC
Confidence 99999998431 11122221 223469999999999754
No 68
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.29 E-value=1.2e-05 Score=93.58 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=93.7
Q ss_pred CCCeEEEEEecCCCCCChH----HHHHHHHHhCCCEEEE-cCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCC
Q 011680 159 DAPYTFGIIGDLGQTYNSL----STLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~~----~~l~~~~~~~pD~vl~-~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~G 233 (479)
...++|++++|+|...... ..++++.+.+|+.+++ +||++..... .. ...+....+.+. .--.-+.++|
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~--~~-~~~g~~~~~~ln---~lg~d~~~~G 731 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY--SN-LLKGLPVLKMMK---EMGYDASTFG 731 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch--hh-hcCChHHHHHHh---CcCCCEEEec
Confidence 3569999999999543222 2344455558887766 9999865431 01 111222223332 2233466999
Q ss_pred CcccccCCCC-----Cccc---ccccccc-cccCC-----cCCCCC---CCCceEEEEcCeEE--EEEeecCCC-C----
Q 011680 234 NHEIEFMPNM-----GEVI---PFKSYLH-RIATP-----YTASKS---TNPLWYAIRRASAH--IIVLSSYSP-Y---- 289 (479)
Q Consensus 234 NHD~~~~~~~-----~~~~---~~~~~~~-~f~~P-----~~~~~~---~~~~yysf~~g~v~--fi~Lds~~~-~---- 289 (479)
|||+++.... .... .-..|.. .|.+- ....+. ....|.-++.++++ ||.|-+... .
T Consensus 732 NHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p 811 (1163)
T PRK09419 732 NHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSP 811 (1163)
T ss_pred ccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCC
Confidence 9998654210 0000 0000000 01100 000000 11246667888754 555544311 0
Q ss_pred C--C---CHHHHHHHHHHHhhcc-cCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccce
Q 011680 290 V--K---YTPQWWWLREELKKVD-REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (479)
Q Consensus 290 ~--~---~~~Q~~WL~~~L~~~~-~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~ye 361 (479)
. . .....+.+++..++.+ ..+...+|+++|......... .++ ....|.++. +||++|.||.|..-
T Consensus 812 ~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 812 GNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 0 1222333444443332 156889999999987532211 111 122333333 69999999999753
No 69
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.26 E-value=8.6e-05 Score=72.80 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=92.2
Q ss_pred CCeEEEEEecCCCCCC--------------hHHHHHHHHH----hCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHH
Q 011680 160 APYTFGIIGDLGQTYN--------------SLSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (479)
Q Consensus 160 ~~~~f~~~gD~~~~~~--------------~~~~l~~~~~----~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~ 220 (479)
..++|+.++|+|.... ....++.+.+ .+++ ++|..||.+....+.... ...+....++|.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~-~~~g~~~~~~mN 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDAS-PPPGSYSNPIFR 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeee-cCCChHHHHHHH
Confidence 4689999999985321 0122333332 2555 677899999765421110 112333333333
Q ss_pred HHhhcCCe-EEcCCCcccccCCCCCcccccccccccccCCc--------CCCCC---CCCceEEEEcC-eEE--EEEeec
Q 011680 221 QSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY--------TASKS---TNPLWYAIRRA-SAH--IIVLSS 285 (479)
Q Consensus 221 ~l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~--------~~~~~---~~~~yysf~~g-~v~--fi~Lds 285 (479)
.+++ .+++||||++..... ...+..+......|. .+... ....|.-++.+ +++ ||.|-+
T Consensus 83 ----~mgyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 83 ----MMPYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred ----hcCCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 3343 679999998532210 000011111111121 00000 11236666776 655 555544
Q ss_pred CCC-CCC------C--HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCc-EEEE
Q 011680 286 YSP-YVK------Y--TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FIFA 354 (479)
Q Consensus 286 ~~~-~~~------~--~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vd-lvls 354 (479)
... ... . ..+.+|+.+.|++ .++.-+|+++|....... + ..+....+.++. ++| ++|.
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~ 225 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLG 225 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEe
Confidence 321 001 1 2233488888875 468899999999874321 1 111122233344 567 7999
Q ss_pred cccccce
Q 011680 355 GHVHAYE 361 (479)
Q Consensus 355 GH~H~ye 361 (479)
||.|...
T Consensus 226 GHsH~~~ 232 (282)
T cd07407 226 GHSHVRD 232 (282)
T ss_pred CCccccc
Confidence 9999753
No 70
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.20 E-value=1.9e-05 Score=77.70 Aligned_cols=187 Identities=15% Similarity=0.062 Sum_probs=86.1
Q ss_pred eEEEEEecCCCCCC-------h----HHHHHHHHHh----C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc
Q 011680 162 YTFGIIGDLGQTYN-------S----LSTLKHYMQS----G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-------~----~~~l~~~~~~----~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~ 225 (479)
++++.++|+|..-. . ...++++.+. + .-++|.+||+....... . ........+.|..+ .
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~--~-~~~g~~~~~~~n~~--g 75 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES--D-LQDAEPDFRGMNLV--G 75 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH--H-hcCcchHHHHHHhh--C
Confidence 47888899876421 1 1234444432 2 34899999988543210 0 11111112233322 2
Q ss_pred CCeEEcCCCcccccCCCCCcccccccccccccCCcCC------CC-CCCCceEEEEcCeEEE--EEeecCCC-C--C---
Q 011680 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTA------SK-STNPLWYAIRRASAHI--IVLSSYSP-Y--V--- 290 (479)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~------~~-~~~~~yysf~~g~v~f--i~Lds~~~-~--~--- 290 (479)
. =..++||||+++... .+........+|.-. .+ ..-..|.-++.+++++ |.+-+... . .
T Consensus 76 ~-Da~~~GNHEfD~G~~-----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~ 149 (285)
T cd07405 76 Y-DAMAVGNHEFDNPLE-----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAY 149 (285)
T ss_pred C-cEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCC
Confidence 2 245779999875421 111111111112100 00 0112366677887654 44443211 0 0
Q ss_pred -CC---HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 291 -KY---TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 291 -~~---~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.+ ....+=+++.+++.+..++.-+|+++|........... .......+...+...++|++|.||.|...
T Consensus 150 ~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~--~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 150 FEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGS--NAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccc--cCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 01 11222222222222214678999999998753221110 00111122222223589999999999855
No 71
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.19 E-value=1.9e-05 Score=83.60 Aligned_cols=80 Identities=18% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCeEEEEEecCCCCCCh--HHH----HHHHH---------HhCCCEEEEcCcccccCC-CCCCc-------hhhhHHHH
Q 011680 159 DAPYTFGIIGDLGQTYNS--LST----LKHYM---------QSGGQSVLFLGDLSYADR-YEYND-------VGIRWDSW 215 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~--~~~----l~~~~---------~~~pD~vl~~GDl~y~~~-~~~~~-------~~~~~~~~ 215 (479)
..+.++++++|+|.+... ... ++.+. ..+++.+|++||+++..+ ++... ....++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 456899999999987542 111 22333 337999999999997532 11110 01123345
Q ss_pred HHHHHHHhhcCCeEEcCCCcccc
Q 011680 216 GRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 216 ~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
.+++..+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56666666788999999999963
No 72
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.18 E-value=0.00013 Score=70.47 Aligned_cols=195 Identities=18% Similarity=0.115 Sum_probs=102.7
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||.-..... ...+..+.+. ++||+|..||++-.+. ... . ...+.+.. ..+-++.+ |||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~--Gi~-~----~~~~~L~~--~GvDviT~-GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGK--GLT-L----KIYEFLKQ--SGVNYITM-GNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCC--CCC-H----HHHHHHHh--cCCCEEEc-cchhc
Confidence 379999998322111 2334555554 8999999999985531 001 1 11222221 24555555 99998
Q ss_pred ccCCCCCcccccccccccccCCcCCCCCCCCceEEEEcCeEEEEEeecC--CCCCC--CHHHHHHHHHHHhhcccCCCCe
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSY--SPYVK--YTPQWWWLREELKKVDREKTPW 313 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Lds~--~~~~~--~~~Q~~WL~~~L~~~~~~~~~w 313 (479)
+....................|.. ..+..|..++.++..+-+++-. ..... ...-++-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 643100000000011111123321 1233466677777666555532 11111 1222333455555433 24779
Q ss_pred EEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEE-e
Q 011680 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLT-V 392 (479)
Q Consensus 314 ~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~-~ 392 (479)
+||.+|.--- .. +.....+.+.+|++|+.-|.|..---.++ -++|+-||+ +
T Consensus 147 IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD~ 198 (266)
T TIGR00282 147 IFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITDV 198 (266)
T ss_pred EEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEecC
Confidence 9999997531 12 34456677889999999999975432222 157888988 3
Q ss_pred CCCCCC
Q 011680 393 GDGGNQ 398 (479)
Q Consensus 393 G~gG~~ 398 (479)
|--|..
T Consensus 199 Gm~G~~ 204 (266)
T TIGR00282 199 GMTGPF 204 (266)
T ss_pred CcccCc
Confidence 555544
No 73
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.17 E-value=0.00011 Score=66.20 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~-~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.+++++||+|..... ....+.....++|+|||+||.+.... ... ++.. -..++++|.||.|.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~------~~~-------l~~~-~~~~i~~V~GN~D~ 64 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT------LDA-------LEGG-LAAKLIAVRGNCDG 64 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc------hHH-------hhcc-cccceEEEEccCCC
Confidence 589999999987532 22223333349999999999997644 111 1110 14689999999996
No 74
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.12 E-value=8e-06 Score=78.90 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=49.0
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHH----HHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-c-C
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-Y-Q 226 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~~----~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~-~ 226 (479)
+||++++|+|.+... ...++.+ .+.++|+||++||+++.... . ......+.+.++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p---~-~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANP---P-AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCC---C-HHHHHHHHHHHHHHHhcCCc
Confidence 489999999986431 1233333 33489999999999986541 1 2222334556666543 3 8
Q ss_pred CeEEcCCCcccc
Q 011680 227 PWIWSAGNHEIE 238 (479)
Q Consensus 227 P~~~v~GNHD~~ 238 (479)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999963
No 75
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.09 E-value=4.4e-05 Score=81.59 Aligned_cols=188 Identities=15% Similarity=0.128 Sum_probs=99.6
Q ss_pred CCCCCeEEEEEecCCCCCC------------hHH----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHH
Q 011680 157 HPDAPYTFGIIGDLGQTYN------------SLS----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (479)
Q Consensus 157 ~~~~~~~f~~~gD~~~~~~------------~~~----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~ 219 (479)
.....++|+...|+|..-. ... .++++.+. +..++|.+||++...... ++........+.|
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~--~~~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLS--DYLTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccc--ccccCCChHHHHH
Confidence 3457899999999987532 111 22334444 557899999999874421 1112222223333
Q ss_pred HHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCc-------C-C-CCCCCCceEEEEcCeEE--EEEeecCC-
Q 011680 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------T-A-SKSTNPLWYAIRRASAH--IIVLSSYS- 287 (479)
Q Consensus 220 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~-------~-~-~~~~~~~yysf~~g~v~--fi~Lds~~- 287 (479)
..+ -.=+.++||||+++..+ .+..+......|. . . .......|.-++.++++ +|.+.+..
T Consensus 100 N~m---~yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NAL---GYDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhc---CCcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 322 22367999999965421 1112222222221 0 0 01112457788888854 56655421
Q ss_pred -CCC--------CCHHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccc
Q 011680 288 -PYV--------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 288 -~~~--------~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 358 (479)
.+. ......+++++.+.+....++.-+|+++|.+............. ...... .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~-----~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV-----PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----cCcceEeccCCc
Confidence 111 11345566766666654344788999999998654322111000 000000 449999999999
Q ss_pred cc
Q 011680 359 AY 360 (479)
Q Consensus 359 ~y 360 (479)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 64
No 76
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.08 E-value=6.6e-06 Score=74.40 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=39.1
Q ss_pred EEEecCCCCCCh----------------HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 165 GIIGDLGQTYNS----------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 165 ~~~gD~~~~~~~----------------~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
.+++|+|.+... ...++.+.+. ++|.|+++||++.... ...+ .+.++.+ ..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~------~~~~---~~~l~~~--~~ 70 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK------AGTE---LELLSRL--NG 70 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC------hHHH---HHHHHhC--CC
Confidence 367888876532 1123333333 7899999999997644 2221 2333332 46
Q ss_pred CeEEcCCCccc
Q 011680 227 PWIWSAGNHEI 237 (479)
Q Consensus 227 P~~~v~GNHD~ 237 (479)
|++.++||||.
T Consensus 71 ~~~~v~GNHD~ 81 (168)
T cd07390 71 RKHLIKGNHDS 81 (168)
T ss_pred CeEEEeCCCCc
Confidence 89999999995
No 77
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.05 E-value=1e-05 Score=75.35 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=42.1
Q ss_pred EEecCCCCCChHH---HHHHHHHh---CCCEEEEcCcccccCCCCCCchhhhHHHH----HHHHHHHh-hcCCeEEcCCC
Q 011680 166 IIGDLGQTYNSLS---TLKHYMQS---GGQSVLFLGDLSYADRYEYNDVGIRWDSW----GRFIEQSA-AYQPWIWSAGN 234 (479)
Q Consensus 166 ~~gD~~~~~~~~~---~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~~~~~~~----~~~~~~l~-~~~P~~~v~GN 234 (479)
++||.|.+..... .+-..++. +.|.+.++||+++.-. . ...|.+. ...+..+. +..|++.++||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~--g---~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWI--G---DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhh--c---CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 6899999854332 23333333 5599999999997522 1 2233333 23333333 46899999999
Q ss_pred ccc
Q 011680 235 HEI 237 (479)
Q Consensus 235 HD~ 237 (479)
||.
T Consensus 77 ~Df 79 (237)
T COG2908 77 HDF 79 (237)
T ss_pred hHH
Confidence 995
No 78
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.97 E-value=2.1e-05 Score=73.66 Aligned_cols=63 Identities=24% Similarity=0.269 Sum_probs=40.3
Q ss_pred EEEecCCCCCChHHHHHHHHHh------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh-----hcCC
Q 011680 165 GIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-----AYQP 227 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~~~------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~-----~~~P 227 (479)
+++||+|.. ...+.++++. +.|.++++||+++.+. + . .+..+.+..+. ...+
T Consensus 1 ~vi~DIHG~---~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~-~---~~vl~~l~~l~~~~~~~~~~ 69 (208)
T cd07425 1 VAIGDLHGD---LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----D-V---IEILWLLYKLEQEAAKAGGK 69 (208)
T ss_pred CEEeCccCC---HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----C-H---HHHHHHHHHHHHHHHhcCCe
Confidence 379999866 3444444432 5799999999998755 2 1 12223333222 3468
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
++++.||||..
T Consensus 70 v~~l~GNHE~~ 80 (208)
T cd07425 70 VHFLLGNHELM 80 (208)
T ss_pred EEEeeCCCcHH
Confidence 99999999963
No 79
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.97 E-value=0.00011 Score=79.05 Aligned_cols=190 Identities=14% Similarity=0.085 Sum_probs=89.0
Q ss_pred CCCeEEEEEecCCCCCC-------hH----HHHHHHHHh----C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHH
Q 011680 159 DAPYTFGIIGDLGQTYN-------SL----STLKHYMQS----G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~-------~~----~~l~~~~~~----~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l 222 (479)
...++|+.++|+|.... .. ..++++.+. + .-++|.+||+...... .. ........++|..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~--s~-~~~g~~~i~~mN~~ 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLI 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh--hh-hcCCchhHHHHhcC
Confidence 46799999999987532 11 223334321 2 3588999998764321 01 01111112222221
Q ss_pred hhcCCeEEcCCCcccccCCCCCcccccccccccccCCcC-------CCC-CCCCceEEEEcCeEE--EEEeecCCC--C-
Q 011680 223 AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------ASK-STNPLWYAIRRASAH--IIVLSSYSP--Y- 289 (479)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~-------~~~-~~~~~yysf~~g~v~--fi~Lds~~~--~- 289 (479)
. .=+.++||||+++... .+..+......|.- ..+ ..-..|.-++.++++ ||.+-+... +
T Consensus 109 --g-~Da~tlGNHEFD~G~~-----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 109 --G-YDAMAVGNHEFDNPLS-----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred --C-CCEEcccccccCcCHH-----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 2 2356789999976422 11111111111210 000 011236667888855 555543211 1
Q ss_pred CC-------CHHHHHHHHHHHhhccc-CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 290 VK-------YTPQWWWLREELKKVDR-EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 290 ~~-------~~~Q~~WL~~~L~~~~~-~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
.. .....+-+++..++... .+..-+|+++|........... ..... ..+..-+...+||++|.||.|..-
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~-~~~~d-~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGS-NAPGD-VEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCC-CCccH-HHHHHhCCccCceEEEeCCCCccc
Confidence 00 11122223333333221 4688999999998753221100 00000 112121222379999999999753
No 80
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.95 E-value=2.7e-05 Score=80.33 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCh---------HHHHHH----HHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCC
Q 011680 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQP 227 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~---------~~~l~~----~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P 227 (479)
+||++++|+|.+... ...++. +.+.+||+||++||+.+.... . ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p---~-~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP---P-SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC---c-HHHHHHHHHHHHHHHhcCCc
Confidence 489999999986321 112333 334499999999999976441 1 1111233445555443 589
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999963
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.85 E-value=0.0003 Score=75.61 Aligned_cols=152 Identities=18% Similarity=0.141 Sum_probs=74.4
Q ss_pred HHHHHhC-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCC
Q 011680 181 KHYMQSG-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATP 259 (479)
Q Consensus 181 ~~~~~~~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P 259 (479)
+++.+.. .-++|.+||++....+. . ......-.++|. .---=+.++||||+++... .+..+.....+|
T Consensus 42 ~~~r~~~~n~l~ldaGD~~~gs~~~--~-~~~g~~~i~~~N---~~g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp 110 (550)
T TIGR01530 42 NKLRAESKNALVLHAGDAIIGTLYF--T-LFGGRADAALMN---AAGFDFFTLGNHEFDAGNE-----GLKEFLEPLEIP 110 (550)
T ss_pred HHHHhhCCCeEEEECCCCCCCccch--h-hcCCHHHHHHHh---ccCCCEEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 3444333 35888999998654311 1 111111122222 1223467999999875421 122221111222
Q ss_pred cCC--------CC--CCCCceEEEEcCe--EEEEEeecCCC-C---CCC-----HHHHHHHH---HHHhhcccCCCCeEE
Q 011680 260 YTA--------SK--STNPLWYAIRRAS--AHIIVLSSYSP-Y---VKY-----TPQWWWLR---EELKKVDREKTPWLI 315 (479)
Q Consensus 260 ~~~--------~~--~~~~~yysf~~g~--v~fi~Lds~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~w~I 315 (479)
.-. .. ..-..|.-++.++ +-||.|.+... . ..+ ....+=++ +.|++ .+..-+|
T Consensus 111 ~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II 187 (550)
T TIGR01530 111 VLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKII 187 (550)
T ss_pred EEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEE
Confidence 100 00 0112466677787 55677754211 0 111 11122222 34444 4678899
Q ss_pred EEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 316 V~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
+++|..... . ..+.++ .+||++|+||+|.+-
T Consensus 188 ~lsH~g~~~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 188 LLSHAGFEK--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EEecCCcHH--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 999986421 1 122333 379999999999854
No 82
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.71 E-value=0.00043 Score=68.95 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~ye 361 (479)
.+..-+|+++|..-+. .+ ..+.++. ++|++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~---------~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS---------IE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc---------hH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 4678899999984211 01 1234443 79999999999754
No 83
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.64 E-value=7.8e-05 Score=67.63 Aligned_cols=48 Identities=23% Similarity=0.243 Sum_probs=31.0
Q ss_pred hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 186 ~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.+||.++++||+++.... .. ...+.... .+......+|+++++||||.
T Consensus 40 ~~~d~lii~GDl~~~~~~--~~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~ 87 (172)
T cd07391 40 YGPERLIILGDLKHSFGG--LS-RQEFEEVA-FLRLLAKDVDVILIRGNHDG 87 (172)
T ss_pred cCCCEEEEeCcccccccc--cC-HHHHHHHH-HHHhccCCCeEEEEcccCcc
Confidence 399999999999976431 11 11222211 23333457899999999995
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.58 E-value=0.00015 Score=64.00 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=37.9
Q ss_pred EEEecCCCCCChHHHHHHHH---Hh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHH-HhhcCCeEEcCCCcc
Q 011680 165 GIIGDLGQTYNSLSTLKHYM---QS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ-SAAYQPWIWSAGNHE 236 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~---~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~-l~~~~P~~~v~GNHD 236 (479)
+++||.+.. ....++++. +. +.|++|++||+.-... + . +.|...+.. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~-~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDE----D-D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCcc----c-h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 367888643 334444443 22 7899999999986544 2 2 233333322 234678899999996
No 85
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.48 E-value=0.0024 Score=70.97 Aligned_cols=59 Identities=20% Similarity=0.133 Sum_probs=33.4
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccc
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 360 (479)
+.+++...+.+..+++-+|++.|..+.........++.. ..+..--+||++|.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~~-----~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENVG-----YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccchh-----hHHhcCCCCCEEEECCCCCc
Confidence 334443333322568899999999874322111111111 12222357999999999984
No 86
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.41 E-value=0.0004 Score=65.74 Aligned_cols=69 Identities=23% Similarity=0.431 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 162 YTFGIIGDLGQTYNS--------------LSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~--------------~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
-+.++++|+|.+... .++++++.+ .+||.+|++||+..... . ...+..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~----~-~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK----K-GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC----C-hHHHHHHHHHHHhc-
Confidence 468899999987431 134555443 28999999999997654 1 13444444555443
Q ss_pred hcCCeEEcCCCccc
Q 011680 224 AYQPWIWSAGNHEI 237 (479)
Q Consensus 224 ~~~P~~~v~GNHD~ 237 (479)
..+++.++||||.
T Consensus 89 -~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 -FRDLILIRGNHDA 101 (225)
T ss_pred -CCcEEEECCCCCC
Confidence 3599999999994
No 87
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.39 E-value=0.0024 Score=55.36 Aligned_cols=65 Identities=22% Similarity=0.226 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCh--------------HHHHHHHHHh-C-CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC
Q 011680 163 TFGIIGDLGQTYNS--------------LSTLKHYMQS-G-GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (479)
Q Consensus 163 ~f~~~gD~~~~~~~--------------~~~l~~~~~~-~-pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~ 226 (479)
.+.++||+|.+... ...+..+.+. + =|.+.++||++-... . -....+.++.|. -
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n------~--~~~a~~IlerLn--G 74 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN------R--ERAAGLILERLN--G 74 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc------h--hhHHHHHHHHcC--C
Confidence 46688999886431 1234444444 4 479999999996543 1 233455566653 3
Q ss_pred CeEEcCCCccc
Q 011680 227 PWIWSAGNHEI 237 (479)
Q Consensus 227 P~~~v~GNHD~ 237 (479)
-...|+||||-
T Consensus 75 rkhlv~GNhDk 85 (186)
T COG4186 75 RKHLVPGNHDK 85 (186)
T ss_pred cEEEeeCCCCC
Confidence 34889999993
No 88
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.36 E-value=0.00077 Score=65.89 Aligned_cols=176 Identities=20% Similarity=0.226 Sum_probs=99.5
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHHh---CCCEEEEcCcccccCC---CCCCchhhhHHHHHHHHH----HHhhcCCeEE
Q 011680 162 YTFGIIGDLGQTYN-SLSTLKHYMQS---GGQSVLFLGDLSYADR---YEYNDVGIRWDSWGRFIE----QSAAYQPWIW 230 (479)
Q Consensus 162 ~~f~~~gD~~~~~~-~~~~l~~~~~~---~pD~vl~~GDl~y~~~---~~~~~~~~~~~~~~~~~~----~l~~~~P~~~ 230 (479)
.|+++-||+|..-+ -..++..+.+. +.|++|+.||+---.+ +.+-.+...+.....++. ...+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999986532 23556666665 8999999999853322 111112334444444433 2345678899
Q ss_pred cCCCcccccCCCCCcccccccccccccCCcCCCCCCCCceE-----EEEcCeEEEEEeecC---CCCCCC----------
Q 011680 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY-----AIRRASAHIIVLSSY---SPYVKY---------- 292 (479)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~yy-----sf~~g~v~fi~Lds~---~~~~~~---------- 292 (479)
+=||||.. .|. ..+|..+= ...+.|| .+.+|++++-.|+.- .+|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999952 111 12332210 0124555 367789999988863 233221
Q ss_pred -------HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCH-----------------HHHHHHHHHHHHcC
Q 011680 293 -------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGE-----------------SMRAVFESWFVHSR 348 (479)
Q Consensus 293 -------~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~-----------------~~r~~l~~l~~~~~ 348 (479)
-.+.+ ...|++. +.+--|.++|-=+-.... +++.. --...+++||++.+
T Consensus 146 tiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~--yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYY--YGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhh--cCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 11211 1233332 345568888854432221 11111 01247788999999
Q ss_pred CcEEEEccccc
Q 011680 349 VDFIFAGHVHA 359 (479)
Q Consensus 349 VdlvlsGH~H~ 359 (479)
...+|+.|.|+
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999996
No 89
>PHA02239 putative protein phosphatase
Probab=97.35 E-value=0.00046 Score=65.81 Aligned_cols=68 Identities=16% Similarity=0.283 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHHh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNS-LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~-~~~l~~~~~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|..... ...++.+... ..|.++++||+++.+. ... +....+++.+....+++.++||||.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~------~s~-~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGK------RSK-DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCC------ChH-HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 68999999964322 1223333332 2599999999998654 111 2222222322234579999999995
No 90
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.33 E-value=0.0034 Score=73.51 Aligned_cols=48 Identities=21% Similarity=0.167 Sum_probs=30.9
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.++.-+|+++|...-....... .+ .....|.++ .+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~--~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSG--AE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCC--cc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 5788999999998754321111 11 122334434 479999999999864
No 91
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.25 E-value=0.0074 Score=67.00 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=28.9
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccce
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 361 (479)
.++.-+|+++|..+-..... ...+. +-.. +.+ -+||++|.||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhHH-HhcCCCCCEEEECCCCCcc
Confidence 56889999999987432111 11111 1111 334 379999999999754
No 92
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=97.13 E-value=0.081 Score=49.67 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=103.4
Q ss_pred eEEEEEecCCCCCChH---HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~---~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.|++++||.=....-. .-|..+.+. ++||+|..|-++-.+- .--|+.+.++++. .+- ..+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~------Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF------GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc------CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 4899999993332322 233444444 8999999999986554 3344555544432 333 469999987
Q ss_pred ccCCCCCcccccccccccccCCcCCCCC-CCCceEEEEcCeEEEEEeec--CCCCC-CCHHHHHHHHHHHhhcccCCCCe
Q 011680 238 EFMPNMGEVIPFKSYLHRIATPYTASKS-TNPLWYAIRRASAHIIVLSS--YSPYV-KYTPQWWWLREELKKVDREKTPW 313 (479)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~-~~~~yysf~~g~v~fi~Lds--~~~~~-~~~~Q~~WL~~~L~~~~~~~~~w 313 (479)
+... ...|-.-..++--|.+-+.. .+..|+-|+..+..+.+++- ..... ..+.-..=+++.|.+.+ .+++.
T Consensus 71 d~~e----i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKE----ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchH----HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 4211 11111111223334433322 23446667776655555543 22211 12333445666666643 45678
Q ss_pred EEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEe
Q 011680 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV 392 (479)
Q Consensus 314 ~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~ 392 (479)
+||-+|.---+.. .+| -++-+-+|.+|+-=|+|.-..-.++ -++|+.|++-
T Consensus 146 iiVDFHAEtTSEK-----------~a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTD 196 (266)
T COG1692 146 IIVDFHAETTSEK-----------NAF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITD 196 (266)
T ss_pred EEEEccccchhhh-----------hhh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEec
Confidence 9999997532211 111 1344557999999999975433332 1578888873
No 93
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.12 E-value=0.00099 Score=63.95 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=46.0
Q ss_pred EEEecCCCCCCh--HHHHHHHHH----h-----CCCEEEEcCcccccCC-CCCCc-------hhhhHHHHHHHHHHHhhc
Q 011680 165 GIIGDLGQTYNS--LSTLKHYMQ----S-----GGQSVLFLGDLSYADR-YEYND-------VGIRWDSWGRFIEQSAAY 225 (479)
Q Consensus 165 ~~~gD~~~~~~~--~~~l~~~~~----~-----~pD~vl~~GDl~y~~~-~~~~~-------~~~~~~~~~~~~~~l~~~ 225 (479)
+++||+|.+... ...++.+.+ . ++|.|+++||+++... +.... ....+..+.++++.+.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999976432 222223322 2 4699999999997632 00000 012244456666677667
Q ss_pred CCeEEcCCCcccc
Q 011680 226 QPWIWSAGNHEIE 238 (479)
Q Consensus 226 ~P~~~v~GNHD~~ 238 (479)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999973
No 94
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.12 E-value=0.0011 Score=63.15 Aligned_cols=64 Identities=28% Similarity=0.447 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh--------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCe
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS--------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~--------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~ 228 (479)
+++++||+|... ..|.++++. +.|.++++||+++.+. + -.+..+.+..+.....+
T Consensus 2 ~i~vigDIHG~~---~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~----~----s~evl~~l~~l~~~~~~ 70 (234)
T cd07423 2 PFDIIGDVHGCY---DELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP----D----SPEVLRLVMSMVAAGAA 70 (234)
T ss_pred CeEEEEECCCCH---HHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC----C----HHHHHHHHHHHhhCCcE
Confidence 689999998763 344444332 2589999999998654 1 12233444444333468
Q ss_pred EEcCCCccc
Q 011680 229 IWSAGNHEI 237 (479)
Q Consensus 229 ~~v~GNHD~ 237 (479)
+++.||||.
T Consensus 71 ~~v~GNHE~ 79 (234)
T cd07423 71 LCVPGNHDN 79 (234)
T ss_pred EEEECCcHH
Confidence 899999995
No 95
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.08 E-value=0.0014 Score=61.23 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
|++++||+|.. ...+.++.+. ++|.++++||+++.+. + . . +.++.+. ..+++.+.||||.
T Consensus 2 ri~~isDiHg~---~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~----~--~--~---~~~~~l~-~~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGH---YSLLQKALDAVGFDPARDRLISVGDLIDRGP----E--S--L---ACLELLL-EPWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCC---HHHHHHHHHHcCCCCCCCEEEEeCCcccCCC----C--H--H---HHHHHHh-cCCEEEeECCChH
Confidence 68999999954 3344444332 5899999999998654 1 1 1 2233332 2468999999995
No 96
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=97.07 E-value=0.016 Score=63.51 Aligned_cols=46 Identities=17% Similarity=0.227 Sum_probs=28.2
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccc
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 360 (479)
.++.-+|++.|..+-........++ .... +.+ -+||+++.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 5688999999998743211111111 1111 233 47999999999974
No 97
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.03 E-value=0.012 Score=64.30 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=28.5
Q ss_pred CCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcccccc
Q 011680 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (479)
Q Consensus 309 ~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 360 (479)
.++.-+|+++|...-....... .+.... .+.+ -+||+++.||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~--~en~~~----~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPG--AENSAY----YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccc--cchHHH----HHhcCCCCCEEEcCCCCcc
Confidence 4688999999998753211111 111111 1333 47999999999974
No 98
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.01 E-value=0.018 Score=55.43 Aligned_cols=175 Identities=14% Similarity=0.155 Sum_probs=94.7
Q ss_pred EEEEecCCCCCChH--HHHHHHHH---------------hCCCEEEEcCcccccCCCCCC--------------chhhhH
Q 011680 164 FGIIGDLGQTYNSL--STLKHYMQ---------------SGGQSVLFLGDLSYADRYEYN--------------DVGIRW 212 (479)
Q Consensus 164 f~~~gD~~~~~~~~--~~l~~~~~---------------~~pD~vl~~GDl~y~~~~~~~--------------~~~~~~ 212 (479)
+++++|+|.+.... ..++.+.+ .+...+|++||.+...+-... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899998876532 12222221 134479999999986431100 112335
Q ss_pred HHHHHHHHHHhhcCCeEEcCCCcccccCCCCCcccccccccccccCCcCCC---CCCCCceEEEEcCeEEEEEeecCCC-
Q 011680 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS---KSTNPLWYAIRRASAHIIVLSSYSP- 288 (479)
Q Consensus 213 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---~~~~~~yysf~~g~v~fi~Lds~~~- 288 (479)
+++..++..+.+.+|+...|||||-.... .+-.++...+ +|.... -..-..-|.|++++++|++.+...-
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~-----lPQqplh~~l-fp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHS-----LPQQPLHRCL-FPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccccc-----CCCCCCCHHH-hhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 55667777888899999999999963211 0111111100 111100 0001123569999999999887541
Q ss_pred ----CCCCHHHHHHHHHHHhhcccCCCCeEEEEecccc-cccCCCCC--CCCHHHHHHHHHHHHHcCCcEEEEcccccce
Q 011680 289 ----YVKYTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHY--MEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (479)
Q Consensus 289 ----~~~~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~-~~~~~~~~--~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 361 (479)
|...+.-++.|+..|+-- |.-+ +...-+-+ .+.+ +++-+.-.+++|+||.|.|+
T Consensus 156 Di~ky~~~~~~l~~me~~L~wr------------HlaPTaPDTL~~yP~~~~D-------pfvi~~~PhVyf~Gnq~~f~ 216 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWR------------HIAPTAPDTLWCYPFTDRD-------PFILEECPHVYFAGNQPKFG 216 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhc------------ccCCCCCCccccccCCCCC-------ceeecCCCCEEEeCCCccee
Confidence 344455577788887651 2111 11000000 0000 12223448999999999998
Q ss_pred ee
Q 011680 362 RS 363 (479)
Q Consensus 362 r~ 363 (479)
-.
T Consensus 217 t~ 218 (257)
T cd07387 217 TK 218 (257)
T ss_pred ee
Confidence 64
No 99
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.95 E-value=0.002 Score=62.86 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|... ..+..+.+. +.|.++++||+++.+. + . .+..+.+..+ ..+++++.||||.
T Consensus 2 ~~~vIGDIHG~~---~~l~~ll~~~~~~~~~D~li~lGDlVdrGp----~--s--~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 2 ATYAIGDIQGCY---DELQRLLEKIDFDPAKDTLWLVGDLVNRGP----D--S--LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred cEEEEEccCCCH---HHHHHHHHhcCCCCCCCEEEEeCCccCCCc----C--H--HHHHHHHHhc--CCCeEEEecChhH
Confidence 578999998653 334433332 6799999999998655 2 1 1233333332 3468899999996
No 100
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.91 E-value=0.0025 Score=61.22 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeE
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~ 229 (479)
|+.++||+|.. ...+.++++. .-|.++++||+++.+. + . .+..+.+..+.....++
T Consensus 2 ~~~vIGDIHG~---~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp----~--S--~~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 2 KYDIIGDIHGC---YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP----H--S--LRMIEIVWELVEKKAAY 70 (245)
T ss_pred ceEEEEECccC---HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc----C--h--HHHHHHHHHHhhCCCEE
Confidence 68999999865 3444444443 1368999999998765 2 1 12233333333345789
Q ss_pred EcCCCccc
Q 011680 230 WSAGNHEI 237 (479)
Q Consensus 230 ~v~GNHD~ 237 (479)
++.||||.
T Consensus 71 ~l~GNHE~ 78 (245)
T PRK13625 71 YVPGNHCN 78 (245)
T ss_pred EEeCccHH
Confidence 99999994
No 101
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=96.89 E-value=0.028 Score=53.77 Aligned_cols=61 Identities=13% Similarity=0.196 Sum_probs=37.9
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceee
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~ 363 (479)
+-+++.+++++. ++..+||++|...-... ... .....+...+...++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~----~p~-~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSY----YPT-PEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCC----CCC-HHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 445555555432 37899999997542111 112 22334444555679999999999987754
No 102
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.74 E-value=0.0039 Score=58.96 Aligned_cols=63 Identities=24% Similarity=0.347 Sum_probs=40.4
Q ss_pred EEEEecCCCCCChHHHHHHHHHh------------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWS 231 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~------------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 231 (479)
+.++||+|... ..++++++. ..|.++++||+++.+. + . .+..+.+..+.....++.+
T Consensus 1 ~~vIGDIHG~~---~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp----~--S--~~vl~~l~~l~~~~~~~~l 69 (222)
T cd07413 1 YDFIGDIHGHA---EKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGP----E--I--RELLEIVKSMVDAGHALAV 69 (222)
T ss_pred CEEEEeccCCH---HHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCC----C--H--HHHHHHHHHhhcCCCEEEE
Confidence 36899998763 344444332 2579999999998765 2 1 2233444444333468899
Q ss_pred CCCccc
Q 011680 232 AGNHEI 237 (479)
Q Consensus 232 ~GNHD~ 237 (479)
.||||.
T Consensus 70 ~GNHE~ 75 (222)
T cd07413 70 MGNHEF 75 (222)
T ss_pred EccCcH
Confidence 999995
No 103
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.70 E-value=0.0043 Score=58.56 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+++++||+|... ..+.++++. +.|-++++||+++.+. + . . +.++-+. ...+..+.||||.
T Consensus 18 ri~vigDIHG~~---~~L~~lL~~i~~~~~~D~li~lGDlvDrGp----~--s--~---~vl~~l~-~~~~~~v~GNHE~ 82 (218)
T PRK11439 18 HIWLVGDIHGCF---EQLMRKLRHCRFDPWRDLLISVGDLIDRGP----Q--S--L---RCLQLLE-EHWVRAVRGNHEQ 82 (218)
T ss_pred eEEEEEcccCCH---HHHHHHHHhcCCCcccCEEEEcCcccCCCc----C--H--H---HHHHHHH-cCCceEeeCchHH
Confidence 899999998763 344444332 5789999999998765 2 1 1 2222222 2346789999995
No 104
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=96.69 E-value=0.028 Score=53.77 Aligned_cols=60 Identities=12% Similarity=0.180 Sum_probs=37.1
Q ss_pred HHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+++.+++++ .++..+||+.|-..-.... ..... ..+...+.+.++|+|+.||.|..+-..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~----p~~~~-~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE----PTDEQ-RELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC----CCHHH-HHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 444454443 3578999999987632111 12222 334444545789999999999887543
No 105
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.60 E-value=0.0057 Score=57.68 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=39.6
Q ss_pred eEEEEEecCCCCCChHHHHHHHHH-----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcc
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQ-----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHE 236 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~-----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 236 (479)
-|++++||+|... ..+.++.+ .+.|.++++||+++.+. + . . +.++.+. ...++.+.||||
T Consensus 15 ~ri~visDiHg~~---~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~----~-~---~---~~l~~l~-~~~~~~v~GNHE 79 (218)
T PRK09968 15 RHIWVVGDIHGEY---QLLQSRLHQLSFCPETDLLISVGDNIDRGP----E-S---L---NVLRLLN-QPWFISVKGNHE 79 (218)
T ss_pred CeEEEEEeccCCH---HHHHHHHHhcCCCCCCCEEEECCCCcCCCc----C-H---H---HHHHHHh-hCCcEEEECchH
Confidence 3899999998653 33333322 26799999999998765 1 1 1 2222222 235789999999
Q ss_pred c
Q 011680 237 I 237 (479)
Q Consensus 237 ~ 237 (479)
.
T Consensus 80 ~ 80 (218)
T PRK09968 80 A 80 (218)
T ss_pred H
Confidence 5
No 106
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.42 E-value=0.017 Score=44.79 Aligned_cols=70 Identities=20% Similarity=0.378 Sum_probs=45.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y 135 (479)
+|+.+++..-. .+++.|.|...... ..-.|+|....+.. ....... +.-...++|++|+|+|.|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~----~~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS------DWQEVTV----PGNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSS------EEEEEEE----ETTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEecccce------eeeeeee----eeeeeeeeeccCCCCCEE
Confidence 57788888654 36999999998421 23467776655432 0111111 112337889999999999
Q ss_pred EEEeCC
Q 011680 136 YYKIGD 141 (479)
Q Consensus 136 ~Y~v~~ 141 (479)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
No 107
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.42 E-value=0.0075 Score=58.24 Aligned_cols=60 Identities=23% Similarity=0.331 Sum_probs=39.6
Q ss_pred EEEecCCCCCChHHHHHHHHHh-----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 165 GIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 165 ~~~gD~~~~~~~~~~l~~~~~~-----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
.++||+|... ..++++.+. +.|.++++||+++.+. + . .+..+++..+ ...+..+.||||.
T Consensus 2 yvIGDIHG~~---~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~--s--~evl~~l~~l--~~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCY---DELQRLLEKINFDPAKDRLWLVGDLVNRGP----D--S--LETLRFVKSL--GDSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCH---HHHHHHHHhcCCCCCCCEEEEecCcCCCCc----C--H--HHHHHHHHhc--CCCeEEEcCCchH
Confidence 5899998653 344444332 5799999999998765 2 1 1233444433 2468899999996
No 108
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.41 E-value=0.0069 Score=59.01 Aligned_cols=67 Identities=18% Similarity=0.276 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCChH-HHHHHHHHh------CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC---CeEEcC
Q 011680 163 TFGIIGDLGQTYNSL-STLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ---PWIWSA 232 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~-~~l~~~~~~------~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~---P~~~v~ 232 (479)
++.++||+|...... ..++.+.+. ..+.+|++||+++.+. + . ....+++..+.... .++++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----d-S---~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----E-T---RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----C-H---HHHHHHHHHhhhcccccceEEEe
Confidence 689999998764322 233444322 2568999999998765 2 1 22333333333222 478999
Q ss_pred CCccc
Q 011680 233 GNHEI 237 (479)
Q Consensus 233 GNHD~ 237 (479)
||||.
T Consensus 75 GNHE~ 79 (304)
T cd07421 75 GNHDF 79 (304)
T ss_pred cCChH
Confidence 99995
No 109
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.39 E-value=0.0077 Score=56.63 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=47.0
Q ss_pred eEEEEEecCCCCCChH-----------------HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHh
Q 011680 162 YTFGIIGDLGQTYNSL-----------------STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~-----------------~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~ 223 (479)
-+.++++|+|.+.... ..++++.+. +|+-+|++||+-.+-... . ...|.....+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~--~-~~e~~~~~~f~~~~~ 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKS--L-RQEKEEVREFLELLD 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCcc--c-cccHHHHHHHHHHhc
Confidence 4789999999975421 223334444 999999999998765411 1 334444444444443
Q ss_pred hcCCeEEcCCCccc
Q 011680 224 AYQPWIWSAGNHEI 237 (479)
Q Consensus 224 ~~~P~~~v~GNHD~ 237 (479)
..-|+++.||||-
T Consensus 97 -~~evi~i~GNHD~ 109 (235)
T COG1407 97 -EREVIIIRGNHDN 109 (235)
T ss_pred -cCcEEEEeccCCC
Confidence 3359999999994
No 110
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.39 E-value=0.13 Score=48.86 Aligned_cols=189 Identities=19% Similarity=0.203 Sum_probs=86.8
Q ss_pred EEEecCCCCCChHH----HHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccccc
Q 011680 165 GIIGDLGQTYNSLS----TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (479)
Q Consensus 165 ~~~gD~~~~~~~~~----~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 239 (479)
+++||. .+..... .|..+.+. ++||||..|.++-.+. .-..+.+.++++ ..+- ..+.|||=++.
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~------Git~~~~~~L~~---~GvD-viT~GNH~wdk 69 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGF------GITPKIAEELFK---AGVD-VITMGNHIWDK 69 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTS------S--HHHHHHHHH---HT-S-EEE--TTTTSS
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCC------CCCHHHHHHHHh---cCCC-EEecCcccccC
Confidence 367887 2211222 33444444 9999999999986543 111222222222 2344 45899998752
Q ss_pred CCCCCcccccccccccccCCcCCCC-CCCCceEEEEcCeEEEEEeec--CCCCCCCHHHHHHHHHHHhhcccCCCCeEEE
Q 011680 240 MPNMGEVIPFKSYLHRIATPYTASK-STNPLWYAIRRASAHIIVLSS--YSPYVKYTPQWWWLREELKKVDREKTPWLIV 316 (479)
Q Consensus 240 ~~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~yysf~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~IV 316 (479)
.. -..+-.-..+.--|.|-+. ..+..|..++.++..+-++|- .........-+..+++.|++. +.+++.+||
T Consensus 70 ke----i~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiV 144 (253)
T PF13277_consen 70 KE----IFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIV 144 (253)
T ss_dssp TT----HHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEE
T ss_pred cH----HHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEE
Confidence 21 0111111112223444332 335668889988877766664 332222223344555555553 246788999
Q ss_pred EecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEe-CCC
Q 011680 317 LMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTV-GDG 395 (479)
Q Consensus 317 ~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~-G~g 395 (479)
=+|.=.- .. +.-.-++-.-+|.+|+--|+|.----.++ -++|+-||+- |--
T Consensus 145 DFHAEaT-----------SE-K~A~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMt 196 (253)
T PF13277_consen 145 DFHAEAT-----------SE-KQAMGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMT 196 (253)
T ss_dssp EEE-S-H-----------HH-HHHHHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EB
T ss_pred EeecCcH-----------HH-HHHHHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCccc
Confidence 9886421 11 12223455678999999999974322221 1578889883 444
Q ss_pred CC
Q 011680 396 GN 397 (479)
Q Consensus 396 G~ 397 (479)
|.
T Consensus 197 G~ 198 (253)
T PF13277_consen 197 GP 198 (253)
T ss_dssp EE
T ss_pred cC
Confidence 44
No 111
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=96.21 E-value=0.11 Score=50.04 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+.+.+++++++++ .++.++||++|.-.-... ...+..+ .+...+.+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~----~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN----YPTPEQR-ELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC----CCCHHHH-HHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888865 578899999998532111 1123333 44445556899999999999988654
No 112
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.15 E-value=0.012 Score=55.36 Aligned_cols=62 Identities=24% Similarity=0.282 Sum_probs=39.4
Q ss_pred EEecCCCCCChHHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh-cCCeEEcCCCcccc
Q 011680 166 IIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (479)
Q Consensus 166 ~~gD~~~~~~~~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 238 (479)
++||+|.. ...+..+.+ ...|.+|++||+++.+. + . .+..+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~---~~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~--~--~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGC---LDDLLRLLEKIGFPPNDKLIFLGDYVDRGP----D--S--VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCC---HHHHHHHHHHhCCCCCCEEEEECCEeCCCC----C--c--HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 78999854 334444443 27899999999998754 1 1 122233333221 34799999999963
No 113
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.08 E-value=0.0086 Score=56.99 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=98.2
Q ss_pred CCEEEEcCcccccCCCCCCchhhhHHHHHHH-------HHHHhhcCCeEEcCCCcccccCCCCCc----ccccccccc--
Q 011680 188 GQSVLFLGDLSYADRYEYNDVGIRWDSWGRF-------IEQSAAYQPWIWSAGNHEIEFMPNMGE----VIPFKSYLH-- 254 (479)
Q Consensus 188 pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~-------~~~l~~~~P~~~v~GNHD~~~~~~~~~----~~~~~~~~~-- 254 (479)
|--++..||++++++....+ .++-.++..+ +.+...++|++.-.||||.+-...... .+..+.|-.
T Consensus 127 plGlV~ggDitddgggq~~q-prEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQ-PREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred ceeEEeecceeccCCCcccC-ccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 44567778999887743322 1111111111 122334689999999999863311000 011112211
Q ss_pred ----cccCCcCCCC--CCCCceEEEEcCeEEEEEeecCCCC-CC-CHHHHHHHHHHHhhcccCCCCeEEEEeccccc--c
Q 011680 255 ----RIATPYTASK--STNPLWYAIRRASAHIIVLSSYSPY-VK-YTPQWWWLREELKKVDREKTPWLIVLMHVPLY--S 324 (479)
Q Consensus 255 ----~f~~P~~~~~--~~~~~yysf~~g~v~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~--~ 324 (479)
.|--|.-.+. .....-||++.|++|.+-+-....- .. ...-+-||+.+|.... +..+.++++.|.-+- +
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~a-adgrpv~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSA-ADGRPVYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeec-cCCCceeehhhhCcccee
Confidence 1111111111 1234478999999998877654321 11 1233679999998643 345568999998773 3
Q ss_pred cCCCCC--------C------CCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 325 SNVVHY--------M------EGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 325 ~~~~~~--------~------~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
+..+.. + .....|..+...++-|+|...|.||.|...-.+
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~may 338 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMAY 338 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccceee
Confidence 222210 0 123457788888999999999999999875443
No 114
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=95.74 E-value=0.031 Score=57.79 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=34.0
Q ss_pred CCCeEEEEEecCCCCCC---------hHHHHHHHH----HhCCCEEEEcCcccccCC
Q 011680 159 DAPYTFGIIGDLGQTYN---------SLSTLKHYM----QSGGQSVLFLGDLSYADR 202 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~---------~~~~l~~~~----~~~pD~vl~~GDl~y~~~ 202 (479)
...+||++..|.|.++. +..+++.++ +++.||||..||+..++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 45799999999998753 445555443 239999999999998766
No 115
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.63 E-value=0.14 Score=44.30 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCcEEEEcccccceeeeeeeCCeecccCCcccccCCCCCCeEEEeCCCCCCCCCCCCCCCCCCCCceeeeC
Q 011680 339 VFESWFVHSRVDFIFAGHVHAYERSYRISNIHYNFTSGDRYPVPDKSAPVYLTVGDGGNQEGLAGRFLDPQPNYSAFREA 418 (479)
Q Consensus 339 ~l~~l~~~~~VdlvlsGH~H~yer~~p~~~~~~~i~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~ 418 (479)
.+.-|-.+..||+.+.||+|.++... -.|-.||-.|++-... +.. .....
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye-------------------~eg~ffvnPGSaTGAf----n~~-------~t~~~ 147 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYE-------------------HEGKFFVNPGSATGAF----NVS-------DTDII 147 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEE-------------------eCCcEEeCCCcccCCC----ccc-------ccCCC
Confidence 45555667899999999999988764 3456777777763221 111 11113
Q ss_pred cccEEEEEEecCceEEEEEEEcCCCCeeeeeEEEEEe
Q 011680 419 SYGHSTLEIKNRTHAFYHWNRNDDGNKVTTDSVVFHN 455 (479)
Q Consensus 419 ~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 455 (479)
...|..|+|...+..++-| +--||+ |.+|.+...|
T Consensus 148 ~PSFvLmDiqg~~~v~YvY-~lidge-VkVdki~ykK 182 (183)
T KOG3325|consen 148 VPSFVLMDIQGSTVVTYVY-RLIDGE-VKVDKIEYKK 182 (183)
T ss_pred CCceEEEEecCCEEEEEEe-eeeCCc-EEEEEEEecC
Confidence 5678999997766555443 445787 4788887655
No 116
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.61 E-value=0.029 Score=54.55 Aligned_cols=65 Identities=23% Similarity=0.318 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCChH-HHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSL-STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~-~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+..++||+|...... ..++++.-. ..|-++++||+++.+. + . .+..+++..+ ...+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP----~-s---levL~~l~~l--~~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGP----G-S---LEVLRYVKSL--GDAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCC----C-H---HHHHHHHHhc--CCCeEEEEChhHH
Confidence 467899998763322 223333212 5689999999998765 2 1 1223333333 1235689999995
No 117
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=94.20 E-value=1.5 Score=42.15 Aligned_cols=67 Identities=21% Similarity=0.168 Sum_probs=41.6
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC---eEEcCC
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP---WIWSAG 233 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P---~~~v~G 233 (479)
...-.+|+.++|.|.-... +... .-|+++++||...-+. ...-..|.+ ...+.| =+++.|
T Consensus 58 ~~~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g~------~~ev~~fn~----~~gslph~yKIVIaG 121 (305)
T KOG3947|consen 58 GPGYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLGL------PEEVIKFNE----WLGSLPHEYKIVIAG 121 (305)
T ss_pred CCCceEEEEecCcccccCc------cccCCCCceEEeccCCccccC------HHHHHhhhH----HhccCcceeeEEEee
Confidence 3456899999999864321 2212 6799999999986433 211122222 223344 378999
Q ss_pred CcccccC
Q 011680 234 NHEIEFM 240 (479)
Q Consensus 234 NHD~~~~ 240 (479)
|||+.++
T Consensus 122 NHELtFd 128 (305)
T KOG3947|consen 122 NHELTFD 128 (305)
T ss_pred ccceeec
Confidence 9998654
No 118
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=94.13 E-value=0.17 Score=49.42 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=39.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHH----hCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~----~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
+++++||+|.. ...+.++.+ ...+-++++||+++.+. . . -+....+..+.- ..-++.+.||||
T Consensus 29 ~i~vvGDiHG~---~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~----~--s--~e~l~~l~~lk~~~p~~v~llrGNHE 97 (271)
T smart00156 29 PVTVCGDIHGQ---FDDLLRLFDLNGPPPDTNYVFLGDYVDRGP----F--S--IEVILLLFALKILYPNRVVLLRGNHE 97 (271)
T ss_pred CEEEEEeCcCC---HHHHHHHHHHcCCCCCceEEEeCCccCCCC----C--h--HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 58999999854 334444433 25678999999998665 1 1 112222222222 234789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 98 ~~ 99 (271)
T smart00156 98 SR 99 (271)
T ss_pred HH
Confidence 74
No 119
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=94.07 E-value=0.15 Score=50.61 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=39.7
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
+++++||+|... ..+.++.+. ..+-+|++||+++.+. . . -+....+..+.-.. -++.+.||||
T Consensus 44 ~i~ViGDIHG~~---~dL~~l~~~~g~~~~~~ylFLGDyVDRG~----~-s---~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 44 PVTVCGDIHGQF---YDLLKLFEVGGSPANTRYLFLGDYVDRGY----F-S---IECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred CEEEEEeCCCCH---HHHHHHHHhcCCCCCceEEEECCccCCCC----C-h---HHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 589999998552 233334333 3488999999998755 1 1 11222222332233 4788999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 113 ~~ 114 (305)
T cd07416 113 CR 114 (305)
T ss_pred HH
Confidence 64
No 120
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=94.04 E-value=0.15 Score=50.75 Aligned_cols=65 Identities=20% Similarity=0.131 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh---C--CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS---G--GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~---~--pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNH 235 (479)
++.++||+|.. ...+.++.+. . -+-+|++||+++.+.. . -+ ...++-.+.... -++.+.|||
T Consensus 52 ~~~vvGDiHG~---~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~---s----~E-vl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGK---LDDLFLIFYKNGLPSPENPYVFNGDFVDRGKR---S----IE-ILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCC---HHHHHHHHHHcCCCCccceEEEeccccCCCCC---c----HH-HHHHHHHHhhcCCCcEEEecCch
Confidence 68999999865 3344444433 2 2679999999987651 1 11 122222222223 388899999
Q ss_pred ccc
Q 011680 236 EIE 238 (479)
Q Consensus 236 D~~ 238 (479)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 974
No 121
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.67 E-value=0.21 Score=54.42 Aligned_cols=75 Identities=19% Similarity=0.338 Sum_probs=49.8
Q ss_pred CCCCCcEEEEEEcCCCCCccEEEE----EecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC----
Q 011680 70 DYDGKAVIISWVTPNELGSNRVQY----GKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD---- 141 (479)
Q Consensus 70 ~~~~~~~~i~W~t~~~~~~~~V~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~---- 141 (479)
....+++.++|.-++.+.....+| -+... ...+|+. ......+|+|+||+|||.|-+||..
T Consensus 453 ~~~~~sitlsW~~p~~png~ildYEvky~ek~~--------~e~~~~~---~~t~~~~~ti~gL~p~t~YvfqVRarT~a 521 (996)
T KOG0196|consen 453 SRTSDSITLSWSEPDQPNGVILDYEVKYYEKDE--------DERSYST---LKTKTTTATITGLKPGTVYVFQVRARTAA 521 (996)
T ss_pred eeccCceEEecCCCCCCCCcceeEEEEEeeccc--------cccceeE---EecccceEEeeccCCCcEEEEEEEEeccc
Confidence 444579999999988665444444 33321 0111211 1123457899999999999999874
Q ss_pred --CCccceEEEECCCC
Q 011680 142 --GDSSREFWFQTPPK 155 (479)
Q Consensus 142 --g~~~~~~~F~T~p~ 155 (479)
|..++...|.|.|.
T Consensus 522 G~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 522 GYGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCCCCCceeeeecCc
Confidence 56677889999885
No 122
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=93.61 E-value=0.44 Score=50.37 Aligned_cols=58 Identities=16% Similarity=0.297 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHc-CCcE-EEEcccccce
Q 011680 293 TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDF-IFAGHVHAYE 361 (479)
Q Consensus 293 ~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~-~Vdl-vlsGH~H~ye 361 (479)
-.|.+|-.+.++. .+.+-+|++.|.|.-... +....+..+...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~--------e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD--------EWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch--------hhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 4577888888877 677889999999973211 1111333444444 5778 9999999744
No 123
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.47 E-value=0.26 Score=50.85 Aligned_cols=81 Identities=15% Similarity=0.266 Sum_probs=52.7
Q ss_pred CCCCeEEEEEecCCCCCChH--HHHHHHHHh---------CCCEEEEcCcccccCC-CCCC-------chhhhHHHHHHH
Q 011680 158 PDAPYTFGIIGDLGQTYNSL--STLKHYMQS---------GGQSVLFLGDLSYADR-YEYN-------DVGIRWDSWGRF 218 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~--~~l~~~~~~---------~pD~vl~~GDl~y~~~-~~~~-------~~~~~~~~~~~~ 218 (479)
....+++++++|.|.+.... ..+..+.+. +...++.+||.++.-+ |+.+ +...+++++.++
T Consensus 222 ~~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~ 301 (481)
T COG1311 222 GDERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEF 301 (481)
T ss_pred CCcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHH
Confidence 34678999999999864321 112222221 4478999999998544 3322 123355666666
Q ss_pred HHHHhhcCCeEEcCCCcccc
Q 011680 219 IEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 219 ~~~l~~~~P~~~v~GNHD~~ 238 (479)
+..+...+-++..|||||..
T Consensus 302 L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 302 LDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HhhCCCCceEEEecCCCCcc
Confidence 66666677799999999963
No 124
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=93.36 E-value=0.22 Score=48.87 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD 236 (479)
.+.++||+|.. ...+.++.+. ..+-+|++||+++.+. . .. +....+..+.- ...++.+.||||
T Consensus 43 ~i~vvGDIHG~---~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~----~--s~--evl~ll~~lk~~~p~~v~llrGNHE 111 (285)
T cd07415 43 PVTVCGDIHGQ---FYDLLELFRVGGDPPDTNYLFLGDYVDRGY----Y--SV--ETFLLLLALKVRYPDRITLLRGNHE 111 (285)
T ss_pred CEEEEEeCCCC---HHHHHHHHHHcCCCCCCeEEEEeEECCCCc----C--HH--HHHHHHHHHhhcCCCcEEEEecccc
Confidence 48899999854 2333333332 4467999999998755 1 11 12222222222 235899999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 112 ~~ 113 (285)
T cd07415 112 SR 113 (285)
T ss_pred hH
Confidence 63
No 125
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=92.79 E-value=0.27 Score=49.92 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CC-CEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~p-D~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNH 235 (479)
++.++||+|.. ...+..+.+. .. +.+|++||+++.+. + . -+....+..+.-.. -++.+.|||
T Consensus 67 ~i~VvGDIHG~---~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp----~--S--lEvl~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 67 EVVVVGDVHGQ---LHDVLFLLEDAGFPDQNRFYVFNGDYVDRGA----W--G--LETFLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CEEEEEecCCC---HHHHHHHHHHhCCCCCCceEEEeccccCCCC----C--h--HHHHHHHHHHhhccCCeEEEEeeec
Confidence 58999999865 3344444443 22 35999999998655 1 1 11222222222223 378999999
Q ss_pred ccc
Q 011680 236 EIE 238 (479)
Q Consensus 236 D~~ 238 (479)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 974
No 126
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=92.42 E-value=0.36 Score=47.58 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=38.3
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
.++++||+|.. ...+.++.+. ..+-+|++||+++.+.. .. + ....+..+.-.. -++.+.||||
T Consensus 51 ~i~viGDIHG~---~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~-----s~--e-~i~ll~~lk~~~p~~i~llrGNHE 119 (293)
T cd07414 51 PLKICGDIHGQ---YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ-----SL--E-TICLLLAYKIKYPENFFLLRGNHE 119 (293)
T ss_pred ceEEEEecCCC---HHHHHHHHHhcCCCCcceEEEEeeEecCCCC-----cH--H-HHHHHHHhhhhCCCcEEEEecccc
Confidence 48899999854 2333333332 45678999999987651 11 1 112222222222 3788999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 120 ~~ 121 (293)
T cd07414 120 CA 121 (293)
T ss_pred hh
Confidence 74
No 127
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=92.40 E-value=0.36 Score=48.15 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=38.3
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHh-C----CCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhh--cCCeEEcCCC
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQS-G----GQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGN 234 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~-~----pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GN 234 (479)
-++.++||+|.. ...+.++.+. + -|-+|++||+++.+.. . -+....+-.+.- ..-++.+.||
T Consensus 60 ~~~~VvGDIHG~---~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~------S--~Evl~ll~~lki~~p~~v~lLRGN 128 (316)
T cd07417 60 EKITVCGDTHGQ---FYDLLNIFELNGLPSETNPYLFNGDFVDRGSF------S--VEVILTLFAFKLLYPNHFHLNRGN 128 (316)
T ss_pred ceeEEeecccCC---HHHHHHHHHhcCCCCccCeEEEEeeEecCCCC------h--HHHHHHHHHhhhccCCceEEEeec
Confidence 368999999854 3344444433 2 2579999999987651 1 111222222211 2236889999
Q ss_pred ccc
Q 011680 235 HEI 237 (479)
Q Consensus 235 HD~ 237 (479)
||.
T Consensus 129 HE~ 131 (316)
T cd07417 129 HET 131 (316)
T ss_pred cch
Confidence 996
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=92.32 E-value=0.3 Score=48.13 Aligned_cols=23 Identities=13% Similarity=0.275 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccc
Q 011680 337 RAVFESWFVHSRVDFIFAGHVHA 359 (479)
Q Consensus 337 r~~l~~l~~~~~VdlvlsGH~H~ 359 (479)
.+++...+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788889999999999999854
No 129
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=91.92 E-value=0.38 Score=47.95 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=38.4
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD 236 (479)
.++++||+|.. ...+.++.+. ..+-+|++||+++.+. . . -+....+..+.-.. -++.+.||||
T Consensus 60 ~i~vvGDIHG~---~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~----~--s--~evl~ll~~lki~~p~~v~llRGNHE 128 (320)
T PTZ00480 60 PLKICGDVHGQ---YFDLLRLFEYGGYPPESNYLFLGDYVDRGK----Q--S--LETICLLLAYKIKYPENFFLLRGNHE 128 (320)
T ss_pred CeEEEeecccC---HHHHHHHHHhcCCCCcceEEEeceecCCCC----C--c--HHHHHHHHHhcccCCCceEEEecccc
Confidence 48899999854 2333333332 4467889999998755 1 1 11122222222222 4789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 129 ~~ 130 (320)
T PTZ00480 129 CA 130 (320)
T ss_pred hh
Confidence 74
No 130
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.90 E-value=0.5 Score=46.78 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHh----CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC--eEEcCCCcc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHE 236 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~----~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P--~~~v~GNHD 236 (479)
.+.++||+|.. ...+.++.+. ..+-+|++||+++.+. . .. +....+-.+.-..| ++.+.||||
T Consensus 44 ~i~vvGDIHG~---~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~----~--s~--evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 44 PVNVCGDIHGQ---FYDLQALFKEGGDIPNANYIFIGDFVDRGY----N--SV--ETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred CEEEEEeCCCC---HHHHHHHHHhcCCCCCceEEEeeeEcCCCC----C--HH--HHHHHHHHhhhcCCCcEEEEecccc
Confidence 38889999854 3333334332 4567999999998765 1 11 11222222222334 789999999
Q ss_pred cc
Q 011680 237 IE 238 (479)
Q Consensus 237 ~~ 238 (479)
..
T Consensus 113 ~~ 114 (303)
T PTZ00239 113 SR 114 (303)
T ss_pred hH
Confidence 63
No 131
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.27 E-value=0.61 Score=46.43 Aligned_cols=22 Identities=9% Similarity=0.211 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 011680 337 RAVFESWFVHSRVDFIFAGHVH 358 (479)
Q Consensus 337 r~~l~~l~~~~~VdlvlsGH~H 358 (479)
.+++...+++.+.++++=||.=
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechh
Confidence 4678889999999999999983
No 132
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=91.19 E-value=1.6 Score=31.96 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=38.8
Q ss_pred eEEEeecCCCCCcEEEEEEcCCCCC--ccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEeC
Q 011680 63 QVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140 (479)
Q Consensus 63 ~v~lt~~~~~~~~~~i~W~t~~~~~--~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~ 140 (479)
.+++..... +++.|+|....... ...++|........ ....... .....++..+.+|+|+++|.++|.
T Consensus 6 ~~~~~~~~~--~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 6 NLRVTDVTS--TSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred cEEEEEEeC--CEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEE
Confidence 355554443 38999998553221 23566655432211 0001110 011157789999999999999985
Q ss_pred C
Q 011680 141 D 141 (479)
Q Consensus 141 ~ 141 (479)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 3
No 133
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=90.63 E-value=1.9 Score=32.62 Aligned_cols=69 Identities=19% Similarity=0.327 Sum_probs=38.3
Q ss_pred CceEEEeecCCCCCcEEEEEEcCCCC----CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEE
Q 011680 61 PQQVRITQGDYDGKAVIISWVTPNEL----GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (479)
Q Consensus 61 P~~v~lt~~~~~~~~~~i~W~t~~~~----~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~ 136 (479)
|..+.+.... ..++.|.|...... ..-.|+|........ ..+. ....-..++.+.+|.|+++|.
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~~~---~~~~~~~~~~i~~l~p~~~Y~ 71 (93)
T cd00063 4 PTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KEVE---VTPGSETSYTLTGLKPGTEYE 71 (93)
T ss_pred CCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EEee---ccCCcccEEEEccccCCCEEE
Confidence 4445444333 36899999887532 123444444321111 1111 011245678899999999999
Q ss_pred EEeCC
Q 011680 137 YKIGD 141 (479)
Q Consensus 137 Y~v~~ 141 (479)
++|..
T Consensus 72 ~~v~a 76 (93)
T cd00063 72 FRVRA 76 (93)
T ss_pred EEEEE
Confidence 99853
No 134
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=85.76 E-value=1.3 Score=50.50 Aligned_cols=80 Identities=28% Similarity=0.499 Sum_probs=47.2
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCcc------EEEEEecCCCC---cceEEeeEEEEeeeccccceEEEEEecCCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGSN------RVQYGKLEKKY---DSSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~------~V~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~ 130 (479)
+|+.|.+... .+++++|+|..+.+.... .++|++..... +..+.|+.+ .-.+++|+
T Consensus 618 PP~Nl~lev~--sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~-------------~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVV--SSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTT-------------QYLFNGLE 682 (1381)
T ss_pred CCcceEEEec--CCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchh-------------hhHhhcCC
Confidence 4555766654 457999999998643221 34454333221 122222221 22567899
Q ss_pred CCcEEEEEeCC------CCccceEEEECCC
Q 011680 131 YDTKYYYKIGD------GDSSREFWFQTPP 154 (479)
Q Consensus 131 p~t~Y~Y~v~~------g~~~~~~~F~T~p 154 (479)
|+|.|.+||.. |..+...++.|+-
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 99999999864 3445677777763
No 135
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=82.81 E-value=1.7 Score=40.37 Aligned_cols=75 Identities=11% Similarity=0.184 Sum_probs=39.0
Q ss_pred EEEEecCCCCCCh--HHHHHHHHH-----hCCCEEEEcCcccccCCCCCC--ch--hhhH-HHH----HHHHHHHhhcCC
Q 011680 164 FGIIGDLGQTYNS--LSTLKHYMQ-----SGGQSVLFLGDLSYADRYEYN--DV--GIRW-DSW----GRFIEQSAAYQP 227 (479)
Q Consensus 164 f~~~gD~~~~~~~--~~~l~~~~~-----~~pD~vl~~GDl~y~~~~~~~--~~--~~~~-~~~----~~~~~~l~~~~P 227 (479)
|++++|.+.+.+. .+.+..+.+ .+|+.+|++|++++....... .. .... ..+ ...+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788999887442 334444443 369999999999986441100 00 0011 111 122223345778
Q ss_pred eEEcCCCcccc
Q 011680 228 WIWSAGNHEIE 238 (479)
Q Consensus 228 ~~~v~GNHD~~ 238 (479)
++.+||+||..
T Consensus 81 vvlvPg~~D~~ 91 (209)
T PF04042_consen 81 VVLVPGPNDPT 91 (209)
T ss_dssp EEEE--TTCTT
T ss_pred EEEeCCCcccc
Confidence 99999999974
No 136
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=79.91 E-value=11 Score=36.95 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=46.3
Q ss_pred CCCCeEEEEEecCCCCCChHHHHHHHHH---h---------CCCEEEEcCcccccCCCC-CCc---hhhhHHHHHHH-H-
Q 011680 158 PDAPYTFGIIGDLGQTYNSLSTLKHYMQ---S---------GGQSVLFLGDLSYADRYE-YND---VGIRWDSWGRF-I- 219 (479)
Q Consensus 158 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~---~---------~pD~vl~~GDl~y~~~~~-~~~---~~~~~~~~~~~-~- 219 (479)
++...+|+++||.+... ..+++++.+ . -|-.+|+.|+++...-.. ... |....+.+... +
T Consensus 24 ~~~~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls 101 (291)
T PTZ00235 24 NDKRHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLIS 101 (291)
T ss_pred CCCceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHH
Confidence 34568999999998863 344444432 1 288999999998653110 001 12223333221 1
Q ss_pred --HHHhhcCCeEEcCCCccc
Q 011680 220 --EQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 220 --~~l~~~~P~~~v~GNHD~ 237 (479)
..+.++.-++.|||-.|-
T Consensus 102 ~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 102 KFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred hChHHHhcCeEEEECCCCCC
Confidence 224456679999999995
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=76.66 E-value=16 Score=42.19 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=48.7
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEEEe
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKI 139 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v 139 (479)
.|.+ +.-..-...++.|.|..+.-.......|..--... -.+....+ ..-.++.+|.||+|.|.|.|||
T Consensus 523 gp~~--~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~------~~n~~e~ti~gL~k~TeY~~~v 591 (1381)
T KOG4221|consen 523 GPVQ--LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRV------ENNATEYTINGLEKYTEYSIRV 591 (1381)
T ss_pred CCcc--ccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEE------ecCccEEEeecCCCccceEEEE
Confidence 4444 44333344799999999864444444443321000 01111111 1224566888999999999998
Q ss_pred CC------CCccceEEEECCC
Q 011680 140 GD------GDSSREFWFQTPP 154 (479)
Q Consensus 140 ~~------g~~~~~~~F~T~p 154 (479)
.. |.++....++|+-
T Consensus 592 vA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 592 VAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred EEecCCCCCCCCCceEEEecc
Confidence 74 4556677888863
No 138
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=75.74 E-value=9.3 Score=43.68 Aligned_cols=72 Identities=24% Similarity=0.335 Sum_probs=46.4
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCC----CCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNE----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~----~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|+.+++.-.. .+++.|+|..... ...-.|+|+...+... +..... ..+-.-.+.|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCcc-----ccccee----ecCCcceEeeeCCCCCce
Confidence 467777766544 3699999965432 2345889998775431 111110 123445678999999999
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|+..|..
T Consensus 890 Y~~~vrA 896 (1051)
T KOG3513|consen 890 YRFYVRA 896 (1051)
T ss_pred EEEEEEE
Confidence 9999864
No 139
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=58.67 E-value=16 Score=34.76 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=35.1
Q ss_pred EEEEecCCCCCChHHHHHHHHHh---CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcC--CeEEcCCCcccc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS---GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHEIE 238 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~---~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 238 (479)
+.+.||+|.. ....++-+.-- .--=-|++||+++.+-+ .-+.+.-+ -.+.... .+..+.||||-.
T Consensus 45 vtvcGDIHGQ--f~Dllelf~igG~~~~t~YLFLGDyVDRG~~-------SvEt~lLL-l~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQ--FYDLLELFRIGGDVPETNYLFLGDYVDRGYY-------SVETFLLL-LALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccch--HHHHHHHHHhCCCCCCCceEeecchhccccc-------hHHHHHHH-HHHhhcCcceeEEeeccchhh
Confidence 4568999854 22233222211 12346789999987652 11333222 2222233 378899999963
No 140
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=57.99 E-value=42 Score=38.65 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=54.8
Q ss_pred CCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCC----CCcceEEeeEEEEeeeccccceEEEEEecCCCCCcE
Q 011680 59 NAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEK----KYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (479)
Q Consensus 59 ~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~ 134 (479)
.+|.+|++.--.+ +.+.|+|.......++...|..... ..+..+. +. .....+- +.+++-+|.|...
T Consensus 616 gpP~~v~~~~i~~--t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~-~v-----p~~~~~~-~sa~vv~L~Pwv~ 686 (1051)
T KOG3513|consen 616 GPPPDVHVDDISD--TTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVT-TV-----PGNITGD-ESATVVNLSPWVE 686 (1051)
T ss_pred CCCCceeEeeecc--ceEEEEeecCCCCCCCceEEeEEecCCCCCcceEee-EC-----CCcccCc-cceeEEccCCCcc
Confidence 4677888874443 6999999988655456666654322 1232222 21 1112333 6689999999999
Q ss_pred EEEEeCC----C--C-ccceEEEECCCCC
Q 011680 135 YYYKIGD----G--D-SSREFWFQTPPKI 156 (479)
Q Consensus 135 Y~Y~v~~----g--~-~~~~~~F~T~p~~ 156 (479)
|.+||.. | . +.+.-..+|.++.
T Consensus 687 YeFRV~AvN~iG~gePS~pS~~~rT~ea~ 715 (1051)
T KOG3513|consen 687 YEFRVVAVNSIGIGEPSPPSEKVRTPEAA 715 (1051)
T ss_pred eEEEEEEEcccccCCCCCCccceecCCCC
Confidence 9999875 3 2 2234467787753
No 141
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=54.24 E-value=16 Score=34.90 Aligned_cols=66 Identities=17% Similarity=0.256 Sum_probs=35.6
Q ss_pred EEEEEecCCCCCChHHHHHHH--HHhCCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhc--CCeEEcCCCccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHY--MQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHEI 237 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~--~~~~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~ 237 (479)
-+.+.||.|.... ..++.+ -...|| -.|++||+++.+.+ .. +-...+-.+.-. -.+-.+.||||.
T Consensus 61 pvtvcGDvHGqf~--dl~ELfkiGG~~pdtnylfmGDyvdrGy~-----Sv---etVS~lva~Kvry~~rvtilrGNHEs 130 (319)
T KOG0371|consen 61 PVTVCGDVHGQFH--DLIELFKIGGLAPDTNYLFMGDYVDRGYY-----SV---ETVSLLVALKVRYPDRVTILRGNHES 130 (319)
T ss_pred ceEEecCcchhHH--HHHHHHHccCCCCCcceeeeeeecccccc-----hH---HHHHHHHHhhccccceeEEecCchHH
Confidence 3567899985422 223222 222555 36789999987652 11 111222122112 346779999996
Q ss_pred c
Q 011680 238 E 238 (479)
Q Consensus 238 ~ 238 (479)
.
T Consensus 131 r 131 (319)
T KOG0371|consen 131 R 131 (319)
T ss_pred H
Confidence 3
No 142
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=52.92 E-value=39 Score=37.76 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=69.1
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCC-----ccEEEEEecCCCCc-----ceEEeeEEEEee--e----c-cccce
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYD-----SSAEGTVTNYTF--Y----K-YKSGY 120 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~-----~~~V~y~~~~~~~~-----~~~~~~~~~~~~--~----~-~~~~~ 120 (479)
...+.-++++......+++.++|..-..+. .-.+.|.+.+.... ..+-|+. .+.. . . -.++.
T Consensus 486 ~Ce~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~-~W~~~~v~~~~~~p~~~~ 564 (1025)
T KOG4258|consen 486 ICEDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSN-SWNVVDVDPPDLIPNDGT 564 (1025)
T ss_pred ecccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccC-cceEEeccCCcCCCcccc
Confidence 356777888877666789999999876542 24677777763211 1122221 1111 0 0 11223
Q ss_pred EEEEEecCCCCCcEEEEEeCC------C----CccceEEEECCCCCCCCCCeEEEEEecC
Q 011680 121 IHHCLVDDLEYDTKYYYKIGD------G----DSSREFWFQTPPKIHPDAPYTFGIIGDL 170 (479)
Q Consensus 121 ~h~v~l~gL~p~t~Y~Y~v~~------g----~~~~~~~F~T~p~~~~~~~~~f~~~gD~ 170 (479)
.--..+.||+|.|.|.|-|.. + ..|+++-++|.|.. ++.|+.++..++.
T Consensus 565 ~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~-PspPl~~ls~sns 623 (1025)
T KOG4258|consen 565 HPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDI-PSPPLDVLSKSNS 623 (1025)
T ss_pred ccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCC-CCCcchhhhccCc
Confidence 337899999999999999874 1 24678999998863 4456666666555
No 143
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=52.48 E-value=14 Score=37.06 Aligned_cols=68 Identities=19% Similarity=0.248 Sum_probs=37.3
Q ss_pred EEEEEecCCCCCChHHHHHHHHHhC---CC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCcccc
Q 011680 163 TFGIIGDLGQTYNSLSTLKHYMQSG---GQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (479)
Q Consensus 163 ~f~~~gD~~~~~~~~~~l~~~~~~~---pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 238 (479)
-+.++||.|.... ..+.-+.... |+ -.|++||+++.+....+- -.+.-.++ +.-.--++...||||..
T Consensus 60 PV~i~GDiHGq~~--DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~-----i~LL~a~K-i~yp~~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 60 PVKIVGDIHGQFG--DLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLET-----ICLLFALK-IKYPENVFLLRGNHECA 131 (331)
T ss_pred CEEEEccCcCCHH--HHHHHHHhcCCCCCcccEEEecccccCCccceEE-----eehhhhhh-hhCCceEEEeccccccc
Confidence 3778899986533 3333232222 43 578999999876621100 00111111 11123489999999975
No 144
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=51.97 E-value=15 Score=32.31 Aligned_cols=32 Identities=38% Similarity=0.526 Sum_probs=21.4
Q ss_pred EEecCCCCCcEEE--EEeCCCC---ccceEEEECCCC
Q 011680 124 CLVDDLEYDTKYY--YKIGDGD---SSREFWFQTPPK 155 (479)
Q Consensus 124 v~l~gL~p~t~Y~--Y~v~~g~---~~~~~~F~T~p~ 155 (479)
-.+++|.|||+|+ |.|..|. ++++..-.|.|-
T Consensus 104 YqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~ 140 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNR 140 (184)
T ss_pred EEeeccCCCcEEEEEEEEecCccceecceeccccccc
Confidence 3578999999999 5566553 344455566664
No 145
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=51.59 E-value=13 Score=40.14 Aligned_cols=49 Identities=20% Similarity=0.338 Sum_probs=31.9
Q ss_pred HHHHHHh-CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccccc
Q 011680 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (479)
Q Consensus 180 l~~~~~~-~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 239 (479)
+..+.+. ..|-+=++||+.+.+..+ + ..|+.|...--+=..|||||+.+
T Consensus 176 l~~lIqrL~VDhLHIvGDIyDRGp~p--------d---~ImD~Lm~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQRLAVDHLHIVGDIYDRGPRP--------D---KIMDRLMNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHHHhhhheeecccccCCCCCh--------h---HHHHHHhcCCCccccccchHHHH
Confidence 3344444 889999999998876521 2 33444444444567899999843
No 146
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=51.00 E-value=50 Score=31.67 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=51.0
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHHHHhCCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccc
Q 011680 159 DAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (479)
Q Consensus 159 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 237 (479)
+...+|++.+|.+. ......++.+.+.+|+++|+.|=.+|-.++... ....+.-.+.++.+....+--.+++-|=+
T Consensus 174 dg~~~i~faSDvqG-p~~~~~l~~i~e~~P~v~ii~GPpty~lg~r~~--~~~~E~~irNl~~ii~~~~~~lViDHHll 249 (304)
T COG2248 174 DGKSSIVFASDVQG-PINDEALEFILEKRPDVLIIGGPPTYLLGYRVG--PKSLEKGIRNLERIIEETNATLVIDHHLL 249 (304)
T ss_pred cCCeEEEEcccccC-CCccHHHHHHHhcCCCEEEecCCchhHhhhhcC--hHHHHHHHHHHHHHHHhCcceEEEeehhh
Confidence 45689999999954 345678888999999999999999976553111 11112224455666666665667777754
No 147
>cd02850 Cellulase_N_term Cellulase N-terminus domain. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually catagorized into either exoglucanases which sequentially release sugar units from the cellulose chain and endoglucanases which also attack the chain internally. The N-terminus of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=45.95 E-value=1.4e+02 Score=23.25 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=20.3
Q ss_pred cceEEEEEecCC-CCCcEEEEEeCC
Q 011680 118 SGYIHHCLVDDL-EYDTKYYYKIGD 141 (479)
Q Consensus 118 ~~~~h~v~l~gL-~p~t~Y~Y~v~~ 141 (479)
....+++.++.| +|||+|+-+++.
T Consensus 54 g~~~~~~DFS~~~~pG~~Y~l~~~~ 78 (86)
T cd02850 54 GDNVHIIDFSSYRTEGTGYYLSVDG 78 (86)
T ss_pred cCeEEEEEcCCCcCCCCeEEEEECC
Confidence 357899999999 789899888875
No 148
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=43.74 E-value=27 Score=20.74 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHhhhhccC
Q 011680 11 LFQIMLYLTLLLSLNNGT 28 (479)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~ 28 (479)
+.+|++...+++.+++|+
T Consensus 7 mKkil~~l~a~~~LagCs 24 (25)
T PF08139_consen 7 MKKILFPLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 456777777777777774
No 149
>PF05423 Mycobact_memb: Mycobacterium membrane protein; InterPro: IPR008693 This family contains several membrane proteins from Mycobacterium species [].
Probab=40.95 E-value=63 Score=28.08 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=22.2
Q ss_pred CCCCCCceEEEeecCCCCCcEEEEEEcCC
Q 011680 56 KGHNAPQQVRITQGDYDGKAVIISWVTPN 84 (479)
Q Consensus 56 ~~~~~P~~v~lt~~~~~~~~~~i~W~t~~ 84 (479)
..+..|..|.....|++++...|+|...+
T Consensus 45 ~~~~~pk~V~YEV~G~~G~~~~I~Y~D~~ 73 (140)
T PF05423_consen 45 TAPFNPKTVTYEVTGPPGSTATISYLDAD 73 (140)
T ss_pred CCCCCCcEEEEEEEcCCCCeEEEEEEcCC
Confidence 45578888888888887777899997554
No 150
>PRK10301 hypothetical protein; Provisional
Probab=40.28 E-value=2.3e+02 Score=23.98 Aligned_cols=14 Identities=21% Similarity=0.235 Sum_probs=11.6
Q ss_pred CCCceEEEeecCCC
Q 011680 59 NAPQQVRITQGDYD 72 (479)
Q Consensus 59 ~~P~~v~lt~~~~~ 72 (479)
.+|.+|.|++.+..
T Consensus 43 ~~P~~V~L~F~e~v 56 (124)
T PRK10301 43 AAPQALTLNFSEGI 56 (124)
T ss_pred cCCCEEEEEcCCCc
Confidence 47999999998765
No 151
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=39.74 E-value=23 Score=33.07 Aligned_cols=64 Identities=20% Similarity=0.348 Sum_probs=35.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHh---CCC-EEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCC--eEEcCCCccc
Q 011680 164 FGIIGDLGQTYNSLSTLKHYMQS---GGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHEI 237 (479)
Q Consensus 164 f~~~gD~~~~~~~~~~l~~~~~~---~pD-~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P--~~~v~GNHD~ 237 (479)
+-+.||+|.. .--+-.+-+. -|| --|++||+++.+.+. .+.|. .+--+.+..| +-...||||.
T Consensus 48 VTvCGDIHGQ---FyDL~eLFrtgG~vP~tnYiFmGDfVDRGyyS-------LEtfT-~l~~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 48 VTVCGDIHGQ---FYDLLELFRTGGQVPDTNYIFMGDFVDRGYYS-------LETFT-LLLLLKARYPAKITLLRGNHES 116 (306)
T ss_pred eeEeeccchh---HHHHHHHHHhcCCCCCcceEEecccccccccc-------HHHHH-HHHHHhhcCCceeEEeeccchh
Confidence 4567999754 2222233333 344 357899999876521 12332 2233344555 6778999996
Q ss_pred c
Q 011680 238 E 238 (479)
Q Consensus 238 ~ 238 (479)
.
T Consensus 117 R 117 (306)
T KOG0373|consen 117 R 117 (306)
T ss_pred h
Confidence 3
No 152
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=39.36 E-value=24 Score=34.12 Aligned_cols=50 Identities=24% Similarity=0.312 Sum_probs=33.2
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCc-EEEEccccc
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD-FIFAGHVHA 359 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~Vd-lvlsGH~H~ 359 (479)
+.|+.-|+..++-..+ ++-.|.| -.++.+.+.+|++++++| +|++||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 4688888775433322 2222332 235567889999999999 589999964
No 153
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=38.54 E-value=30 Score=33.60 Aligned_cols=51 Identities=24% Similarity=0.282 Sum_probs=34.0
Q ss_pred HHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCc-EEEEcccccc
Q 011680 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD-FIFAGHVHAY 360 (479)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~Vd-lvlsGH~H~y 360 (479)
+.|+.-|+..++-..+ ..-.|.| -.++.+.+.+|+.++++| +|++||+-..
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~~ 167 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGYL 167 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhhh
Confidence 4688888765333322 2223332 235678899999999999 5899999753
No 154
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=36.75 E-value=38 Score=35.11 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=28.2
Q ss_pred CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCccccc
Q 011680 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (479)
Q Consensus 187 ~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 239 (479)
..|-+=++||+.+.+.+| + ..|+.+...--+=.-|||||+-+
T Consensus 190 vVDhLHiVGDIyDRGP~p--------d---~Imd~L~~yhsvDiQWGNHDilW 231 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYP--------D---KIMDTLINYHSVDIQWGNHDILW 231 (648)
T ss_pred hhhheeeecccccCCCCc--------h---HHHHHHhhcccccccccCcceEE
Confidence 789999999988776632 1 23444443344556899999854
No 155
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=35.86 E-value=1.9e+02 Score=28.61 Aligned_cols=19 Identities=16% Similarity=0.238 Sum_probs=16.1
Q ss_pred EEEecCCCCCcEEEEEeCC
Q 011680 123 HCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~ 141 (479)
..+|.||+||+.|-..|..
T Consensus 261 tetI~~L~PG~~Yl~dV~~ 279 (300)
T PF10179_consen 261 TETIKGLKPGTTYLFDVYV 279 (300)
T ss_pred eeecccCCCCcEEEEEEEE
Confidence 4479999999999988764
No 156
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=33.85 E-value=70 Score=26.03 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=17.2
Q ss_pred eEEEEEecCCCCCChHHHHHHHHHhCCCEE
Q 011680 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQSV 191 (479)
Q Consensus 162 ~~f~~~gD~~~~~~~~~~l~~~~~~~pD~v 191 (479)
.+|+.+||.|+.. .+++..+.+.-|+-|
T Consensus 65 ~kfiLIGDsgq~D--peiY~~ia~~~P~~i 92 (100)
T PF09949_consen 65 RKFILIGDSGQHD--PEIYAEIARRFPGRI 92 (100)
T ss_pred CcEEEEeeCCCcC--HHHHHHHHHHCCCCE
Confidence 5777777776643 556666666655443
No 157
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=33.24 E-value=55 Score=26.46 Aligned_cols=24 Identities=13% Similarity=0.393 Sum_probs=20.8
Q ss_pred cceEEEEEecCCCCCcEEEEEeCC
Q 011680 118 SGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 118 ~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+-++++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 356888999999999999999974
No 158
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=33.09 E-value=1.3e+02 Score=33.91 Aligned_cols=98 Identities=20% Similarity=0.385 Sum_probs=57.7
Q ss_pred cccccCCCCCcCccCcCccccCCCCCCCCceEEEeecCCCCCcEEEEEEcCCCC-CccEEEEEecCCC-----CcceEEe
Q 011680 33 SRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKK-----YDSSAEG 106 (479)
Q Consensus 33 ~~~~r~~~~~~~~p~~~~~~~~p~~~~~P~~v~lt~~~~~~~~~~i~W~t~~~~-~~~~V~y~~~~~~-----~~~~~~~ 106 (479)
..|-|++..+++||=+. +| .+|..+... -.++++.+.|.-+... +..-|.|...=.. ..-..-|
T Consensus 314 ~gyyRA~~Dp~~mpCT~----PP---SaP~nlis~---vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg 383 (996)
T KOG0196|consen 314 NGYYRADSDPPSMPCTR----PP---SAPRNLISN---VNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCG 383 (996)
T ss_pred CCcccCCCCCCCCCCCC----CC---Cccceeeee---cccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCC
Confidence 35668776666776533 22 367666555 2348999999987543 4556666653211 0111223
Q ss_pred eEEEEeeeccccceEEEEEecCCCCCcEEEEEeCC
Q 011680 107 TVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 107 ~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
....|.-. ...-..-+|.+++|.|-+.|.+.|..
T Consensus 384 ~~V~f~P~-q~gLt~~~V~v~~L~ah~~YTFeV~A 417 (996)
T KOG0196|consen 384 DNVRFTPR-QRGLTETSVTVSDLLAHTNYTFEVEA 417 (996)
T ss_pred CCceECCC-CCCcccceEEEeccccccccEEEEEE
Confidence 23333311 11123458899999999999999874
No 159
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=31.84 E-value=59 Score=27.04 Aligned_cols=22 Identities=27% Similarity=0.575 Sum_probs=20.2
Q ss_pred ceEEEEEecCCCCCcEEEEEeC
Q 011680 119 GYIHHCLVDDLEYDTKYYYKIG 140 (479)
Q Consensus 119 ~~~h~v~l~gL~p~t~Y~Y~v~ 140 (479)
+-++++.+.++.+|+.|.|+|.
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~ 69 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVD 69 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEEC
Confidence 5688899999999999999997
No 160
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=30.75 E-value=2.9e+02 Score=22.30 Aligned_cols=70 Identities=23% Similarity=0.296 Sum_probs=41.7
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCCCC---CccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCC--CCcE
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPNEL---GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE--YDTK 134 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~~~---~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~--p~t~ 134 (479)
+|+.|.+.... -..++.|.-.... ..-.|+|.......+..+.+ .... ...++.|+... +...
T Consensus 24 ~P~nv~~~s~n---f~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~-C~~i--------~~~~Cdlt~~~~~~~~~ 91 (107)
T PF01108_consen 24 APQNVTVDSVN---FKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPG-CQNI--------TETSCDLTDETSDPSES 91 (107)
T ss_dssp SCEEEEEEEET---TEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECC-EEEE--------SSSEEECTTCCTTTTSE
T ss_pred CCCeeEEEEEC---CceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccc-eecc--------cccceeCcchhhcCcCC
Confidence 67778877653 3689999984322 22378887443333333311 1111 12567787744 7889
Q ss_pred EEEEeCC
Q 011680 135 YYYKIGD 141 (479)
Q Consensus 135 Y~Y~v~~ 141 (479)
|+.||..
T Consensus 92 Y~~rV~A 98 (107)
T PF01108_consen 92 YYARVRA 98 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
No 161
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.53 E-value=62 Score=25.08 Aligned_cols=23 Identities=26% Similarity=0.403 Sum_probs=19.3
Q ss_pred ceEEEEEecCCCCCcEEEEEeCCC
Q 011680 119 GYIHHCLVDDLEYDTKYYYKIGDG 142 (479)
Q Consensus 119 ~~~h~v~l~gL~p~t~Y~Y~v~~g 142 (479)
.-++++.+.++ +|..|.|++..+
T Consensus 39 ~G~W~~~v~~~-~g~~Y~y~v~~~ 61 (85)
T cd02853 39 DGWFEAEVPGA-AGTRYRYRLDDG 61 (85)
T ss_pred CcEEEEEeCCC-CCCeEEEEECCC
Confidence 34778899999 999999999853
No 162
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=28.94 E-value=46 Score=32.81 Aligned_cols=19 Identities=26% Similarity=0.494 Sum_probs=15.9
Q ss_pred EEEEecCCCCCcEEEEEeC
Q 011680 122 HHCLVDDLEYDTKYYYKIG 140 (479)
Q Consensus 122 h~v~l~gL~p~t~Y~Y~v~ 140 (479)
-+.+|.+|+|+|+||+-|-
T Consensus 15 t~~t~~~L~p~t~YyfdVF 33 (300)
T PF10179_consen 15 TNQTLSGLKPDTTYYFDVF 33 (300)
T ss_pred ceEEeccCCCCCeEEEEEE
Confidence 3457889999999999864
No 163
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=28.70 E-value=57 Score=30.07 Aligned_cols=14 Identities=29% Similarity=0.408 Sum_probs=11.6
Q ss_pred CCcEEEEcccccce
Q 011680 348 RVDFIFAGHVHAYE 361 (479)
Q Consensus 348 ~VdlvlsGH~H~ye 361 (479)
+.+++++||+|.-.
T Consensus 168 ~~~~iV~GHTh~~~ 181 (207)
T cd07424 168 GVDAVVHGHTPVKR 181 (207)
T ss_pred CCCEEEECCCCCCc
Confidence 46899999999764
No 164
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.48 E-value=99 Score=32.25 Aligned_cols=66 Identities=11% Similarity=0.084 Sum_probs=38.8
Q ss_pred CeEEEEEecCCCCCChHHHHHHHH---Hh--CCCEEEEcCcccccCCCCCCchhhhHHHHHHHHHHHhhcCCeEEcCCCc
Q 011680 161 PYTFGIIGDLGQTYNSLSTLKHYM---QS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (479)
Q Consensus 161 ~~~f~~~gD~~~~~~~~~~l~~~~---~~--~pD~vl~~GDl~y~~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 235 (479)
+.+++++||... +....++++. +. ..|+++++|++...+. + ...|..+..-... -.+|.+..-+|-
T Consensus 5 ~~kILv~Gd~~G--r~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~----~-~~e~~~ykng~~~--vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEG--RFDELIKRIQKVNKKSGPFDLLICVGNFFGHDT----Q-NAEVEKYKNGTKK--VPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccc--cHHHHHHHHHHHhhcCCCceEEEEecccCCCcc----c-hhHHHHHhcCCcc--CceeEEEecCCC
Confidence 369999999843 3444454443 33 5899999999987533 2 3444443322111 145666655554
No 165
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=28.05 E-value=68 Score=25.68 Aligned_cols=24 Identities=13% Similarity=0.093 Sum_probs=20.7
Q ss_pred cceEEEEEecCCCCCcEEEEEeCC
Q 011680 118 SGYIHHCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 118 ~~~~h~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.+-++++.+.++.+|+.|.|+|..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 456888999999999999999963
No 166
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=27.80 E-value=51 Score=26.48 Aligned_cols=19 Identities=21% Similarity=0.336 Sum_probs=14.5
Q ss_pred EEEecCCCCCcEEEEEeCC
Q 011680 123 HCLVDDLEYDTKYYYKIGD 141 (479)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~ 141 (479)
.++|.+|+|+|.|..+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 3579999999999999874
No 167
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=26.92 E-value=1.5e+02 Score=30.30 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=38.3
Q ss_pred HHHHHhhcccCCCCeEEEEecccc-cccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcccccceeee
Q 011680 299 LREELKKVDREKTPWLIVLMHVPL-YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSY 364 (479)
Q Consensus 299 L~~~L~~~~~~~~~w~IV~~H~P~-~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yer~~ 364 (479)
++.+++.++ +++.-+|++.|+-. |..... .-+.+|..-+...++++++.+|-|..|-..
T Consensus 213 ~~~~v~~a~-k~adlviv~~HwG~ey~~~p~------~~q~~~a~~lidAGa~iIvGhhpHvlqpiE 272 (372)
T COG2843 213 VLAAVLAAK-KGADLVIVQPHWGVEYAYEPA------AGQRALARRLIDAGADIIVGHHPHVLQPIE 272 (372)
T ss_pred hHHHHHhhh-ccCCEEEEeccccccccCCCc------HHHHHHHHHHHhcCcCeEecCCCCcCcceE
Confidence 444444443 56778999999843 432221 223455555556999999999999988654
No 168
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D.
Probab=26.06 E-value=1.5e+02 Score=23.86 Aligned_cols=64 Identities=11% Similarity=0.163 Sum_probs=31.7
Q ss_pred CCCCceEEEeecCCCCCcEEEEEEcCCCCCccEEEEEecCCCCcceEEeeEEEEeeeccccceEEEEEecCCCCCcEEEE
Q 011680 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (479)
Q Consensus 58 ~~~P~~v~lt~~~~~~~~~~i~W~t~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~v~l~gL~p~t~Y~Y 137 (479)
.+.|..+.+-.|. .++|.|...+.. ...+.... .... ... ..+-.-.++++.++||+ |.|
T Consensus 31 ~f~P~~i~v~~G~----~v~l~~~N~~~~-~h~~~i~~----~~~~-----~~l-----~~g~~~~~~f~~~~~G~-y~~ 90 (104)
T PF13473_consen 31 GFSPSTITVKAGQ----PVTLTFTNNDSR-PHEFVIPD----LGIS-----KVL-----PPGETATVTFTPLKPGE-YEF 90 (104)
T ss_dssp EEES-EEEEETTC----EEEEEEEE-SSS--EEEEEGG----GTEE-----EEE------TT-EEEEEEEE-S-EE-EEE
T ss_pred eEecCEEEEcCCC----eEEEEEEECCCC-cEEEEECC----CceE-----EEE-----CCCCEEEEEEcCCCCEE-EEE
Confidence 4578778776543 577888876532 23333222 1110 111 23445566778899997 888
Q ss_pred EeCC
Q 011680 138 KIGD 141 (479)
Q Consensus 138 ~v~~ 141 (479)
.|..
T Consensus 91 ~C~~ 94 (104)
T PF13473_consen 91 YCTM 94 (104)
T ss_dssp B-SS
T ss_pred EcCC
Confidence 8875
No 169
>PRK13792 lysozyme inhibitor; Provisional
Probab=23.24 E-value=4.7e+02 Score=22.30 Aligned_cols=23 Identities=9% Similarity=0.304 Sum_probs=11.5
Q ss_pred CCceEEEeecCCCCCcEEEEEEcCC
Q 011680 60 APQQVRITQGDYDGKAVIISWVTPN 84 (479)
Q Consensus 60 ~P~~v~lt~~~~~~~~~~i~W~t~~ 84 (479)
.++.++..=.+ ...+.|......
T Consensus 43 ~~~tv~YqC~~--~~~~tV~y~n~~ 65 (127)
T PRK13792 43 DTRSVDYKCEN--GRKFTVQYLNKG 65 (127)
T ss_pred ccceEEEECCC--CCEEEEEEeCCC
Confidence 34445544433 235677666543
No 170
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=21.86 E-value=3.1e+02 Score=24.46 Aligned_cols=52 Identities=17% Similarity=0.131 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhcccCCCCeEEEEecccccccCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcc
Q 011680 293 TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGH 356 (479)
Q Consensus 293 ~~Q~~WL~~~L~~~~~~~~~w~IV~~H~P~~~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH 356 (479)
++..+=+.+.|++ .-....|+..|+|.+ .+...+.+...+.+.+.|+++.|=
T Consensus 58 ~~~~~~~~~~l~~---~yP~l~ivg~~~g~f---------~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 58 EEVLEKAAANLRR---RYPGLRIVGYHHGYF---------DEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred HHHHHHHHHHHHH---HCCCeEEEEecCCCC---------ChhhHHHHHHHHHHcCCCEEEEEC
Confidence 4455556666665 222345555666665 122345666778899999998873
Done!