Query 011682
Match_columns 479
No_of_seqs 323 out of 2157
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 13:11:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011682.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011682hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ymga1 f.19.1.1 (A:6-239) Aqu 16.6 87 0.0063 26.7 5.6 36 394-429 68-103 (234)
2 d1fx8a_ f.19.1.1 (A:) Glycerol 11.9 2.1E+02 0.015 24.4 6.9 36 393-428 67-102 (254)
3 d1rc2a_ f.19.1.1 (A:) Aquapori 10.0 1.6E+02 0.012 24.5 5.3 33 397-429 71-103 (231)
4 d1j4na_ f.19.1.1 (A:) Aquapori 9.9 2E+02 0.015 24.4 6.0 35 395-429 84-118 (249)
5 d1cola_ f.1.1.1 (A:) Colicin A 9.5 2.2E+02 0.016 23.7 5.7 23 411-433 174-196 (197)
6 d2h8pc1 f.14.1.1 (C:22-78) Pot 8.5 1.2E+02 0.0089 20.2 2.9 22 8-29 2-23 (57)
7 d1ymga1 f.19.1.1 (A:6-239) Aqu 8.1 2.5E+02 0.018 23.4 5.8 24 150-173 76-99 (234)
8 d1j4na_ f.19.1.1 (A:) Aquapori 6.5 6.3E+02 0.046 20.7 13.3 24 150-173 91-114 (249)
9 d1ciia1 f.1.1.1 (A:451-624) Co 5.9 1.5E+02 0.011 24.3 2.8 19 411-429 153-171 (174)
10 d1rc2a_ f.19.1.1 (A:) Aquapori 4.6 3.3E+02 0.024 22.4 4.4 25 150-174 76-100 (231)
No 1
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.61 E-value=87 Score=26.71 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=31.1
Q ss_pred HHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHhH
Q 011682 394 VEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 429 (479)
Q Consensus 394 v~~~~~g~i~~~~a~~l~~~~~ig~~iG~~l~~~i~ 429 (479)
+.++..|+++|.......+.-++|+++|+.+++.+-
T Consensus 68 la~~~~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~ 103 (234)
T d1ymga1 68 FAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVT 103 (234)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhccCCChhheeeeeehHHHHHHHHHHHHHHHc
Confidence 445678999999999999999999999999887653
No 2
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=11.92 E-value=2.1e+02 Score=24.36 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=30.6
Q ss_pred HHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 011682 393 VVEYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKL 428 (479)
Q Consensus 393 ~v~~~~~g~i~~~~a~~l~~~~~ig~~iG~~l~~~i 428 (479)
++..+..|+++|.......+.-++|+++|+.+++-+
T Consensus 67 Tla~~i~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~ 102 (254)
T d1fx8a_ 67 TIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGL 102 (254)
T ss_dssp HHHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 345667899999999999999999999999887654
No 3
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=10.03 E-value=1.6e+02 Score=24.52 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=29.5
Q ss_pred HHhCCcchHHHHHHHHHHHHHHHHHHHHHHHhH
Q 011682 397 YLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 429 (479)
Q Consensus 397 ~~~g~i~~~~a~~l~~~~~ig~~iG~~l~~~i~ 429 (479)
+..|+++|.......+.-++|+++|+.+++-+.
T Consensus 71 ~~~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~i~ 103 (231)
T d1rc2a_ 71 WAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIA 103 (231)
T ss_dssp HHTTCSCTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999999999999999998887664
No 4
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=9.90 E-value=2e+02 Score=24.36 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=30.2
Q ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHhH
Q 011682 395 EYYLLKRFPVPYALYFFALSIIAAFVGQHVLKKLI 429 (479)
Q Consensus 395 ~~~~~g~i~~~~a~~l~~~~~ig~~iG~~l~~~i~ 429 (479)
..+..|++++.......+.-++|+++|+.+.+.+-
T Consensus 84 a~~~~g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~ 118 (249)
T d1j4na_ 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGIT 118 (249)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccccchhheeeeeeHHHHHHHHHHhhheeec
Confidence 45667999999999999999999999998877664
No 5
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=9.51 E-value=2.2e+02 Score=23.72 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHh
Q 011682 411 FALSIIAAFVGQHVLKKLIKILG 433 (479)
Q Consensus 411 ~~~~~ig~~iG~~l~~~i~~~~~ 433 (479)
++.+++++++.-.++.++.+...
T Consensus 174 li~~~v~alIdd~~~~~iN~~li 196 (197)
T d1cola_ 174 LLAAVVGALIDDKFADALNNEII 196 (197)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHh
Confidence 56667777777777777766543
No 6
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=8.45 E-value=1.2e+02 Score=20.16 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=13.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHh
Q 011682 8 CFRWRLLAAAFIGLLVVASVSV 29 (479)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~ 29 (479)
.++||.+..+.+.+++.+++.+
T Consensus 2 a~~~R~~~~~~~~~~i~i~~~s 23 (57)
T d2h8pc1 2 ALHWRAAGAATVLLVIVLLAGS 23 (57)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 4688988886655555444433
No 7
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.06 E-value=2.5e+02 Score=23.43 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=22.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Q 011682 150 IDYDLALLFQPLLVLGISIGVAFN 173 (479)
Q Consensus 150 id~~l~l~l~~~~~~Ga~iGa~l~ 173 (479)
++|+......++-++|+++|+.+.
T Consensus 76 i~~~~~~~Yi~aQ~lGa~~ga~l~ 99 (234)
T d1ymga1 76 MSLLRAICYMVAQLLGAVAGAAVL 99 (234)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhheeeeeehHHHHHHHHHHHH
Confidence 999999999999999999998764
No 8
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.49 E-value=6.3e+02 Score=20.75 Aligned_cols=24 Identities=17% Similarity=0.180 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Q 011682 150 IDYDLALLFQPLLVLGISIGVAFN 173 (479)
Q Consensus 150 id~~l~l~l~~~~~~Ga~iGa~l~ 173 (479)
++|+........-++|+.+|+.+.
T Consensus 91 i~~~~~~~Yi~aQ~lGa~~g~~~~ 114 (249)
T d1j4na_ 91 ISVLRAIMYIIAQCVGAIVATAIL 114 (249)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeeeeeHHHHHHHHHHhhh
Confidence 899999999999999999998665
No 9
>d1ciia1 f.1.1.1 (A:451-624) Colicin Ia {Escherichia coli [TaxId: 562]}
Probab=5.88 E-value=1.5e+02 Score=24.29 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHhH
Q 011682 411 FALSIIAAFVGQHVLKKLI 429 (479)
Q Consensus 411 ~~~~~ig~~iG~~l~~~i~ 429 (479)
++.+++++++.-..+.++.
T Consensus 153 li~~~v~a~Idd~~v~~iN 171 (174)
T d1ciia1 153 LLMAVTGALIDESLVEKAN 171 (174)
T ss_dssp HHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHh
Confidence 4555666776666666554
No 10
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=4.56 E-value=3.3e+02 Score=22.37 Aligned_cols=25 Identities=12% Similarity=0.016 Sum_probs=22.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Q 011682 150 IDYDLALLFQPLLVLGISIGVAFNV 174 (479)
Q Consensus 150 id~~l~l~l~~~~~~Ga~iGa~l~~ 174 (479)
++|+.+....+.-++|+.+|+.+..
T Consensus 76 ~~~~~~~~Yi~aQ~lGa~~g~~l~~ 100 (231)
T d1rc2a_ 76 FPAKEVVGYVIAQVVGGIVAAALLY 100 (231)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999988764
Done!