Query 011684
Match_columns 479
No_of_seqs 312 out of 2214
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 13:13:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 4E-91 1.4E-95 729.4 2.9 415 58-479 2-426 (428)
2 3l60_A Branched-chain alpha-ke 100.0 1.5E-57 5E-62 443.4 23.4 216 262-478 18-239 (250)
3 2ii3_A Lipoamide acyltransfera 100.0 1.1E-57 3.7E-62 447.8 22.0 222 257-478 30-258 (262)
4 1dpb_A Dihydrolipoyl-transacet 100.0 2.2E-57 7.6E-62 441.7 23.9 221 258-479 15-243 (243)
5 1scz_A E2, dihydrolipoamide su 100.0 7.7E-58 2.6E-62 442.3 19.0 219 258-478 4-230 (233)
6 3mae_A 2-oxoisovalerate dehydr 100.0 1.8E-57 6E-62 444.3 21.4 221 256-478 16-244 (256)
7 3b8k_A PDCE2;, dihydrolipoylly 100.0 1.8E-57 6E-62 441.7 14.6 221 258-479 12-239 (239)
8 3rqc_A Probable lipoamide acyl 100.0 6.6E-56 2.2E-60 426.3 21.8 213 258-479 6-222 (224)
9 1q23_A Chloramphenicol acetylt 100.0 1.9E-42 6.4E-47 331.6 25.6 201 260-475 10-216 (219)
10 3cla_A Type III chloramphenico 100.0 4E-42 1.4E-46 328.1 25.4 197 263-473 8-210 (213)
11 2xt6_A 2-oxoglutarate decarbox 100.0 1.4E-43 4.8E-48 405.6 13.0 205 273-477 1-225 (1113)
12 2i9d_A Chloramphenicol acetylt 100.0 5.5E-41 1.9E-45 320.7 23.4 197 262-471 9-216 (217)
13 1zy8_K Pyruvate dehydrogenase 100.0 8.9E-32 3.1E-36 258.4 4.2 167 57-226 2-169 (229)
14 2dne_A Dihydrolipoyllysine-res 99.8 2.1E-19 7.1E-24 153.1 12.2 87 56-142 5-92 (108)
15 1y8o_B Dihydrolipoyllysine-res 99.8 7.3E-19 2.5E-23 153.6 12.6 85 55-139 24-109 (128)
16 3crk_C Dihydrolipoyllysine-res 99.8 8.3E-19 2.8E-23 143.5 11.9 81 57-137 4-85 (87)
17 2dnc_A Pyruvate dehydrogenase 99.8 7.3E-19 2.5E-23 147.1 10.0 82 56-137 5-87 (98)
18 1k8m_A E2 component of branche 99.8 1.9E-18 6.6E-23 143.2 9.8 79 57-135 3-81 (93)
19 1ghj_A E2, E2, the dihydrolipo 99.7 1.2E-17 4.2E-22 133.9 9.4 76 59-134 2-77 (79)
20 2l5t_A Lipoamide acyltransfera 99.7 1E-16 3.6E-21 127.7 8.6 75 59-133 2-76 (77)
21 1qjo_A Dihydrolipoamide acetyl 99.7 1.3E-16 4.6E-21 128.0 8.8 75 59-135 3-77 (80)
22 1pmr_A Dihydrolipoyl succinylt 99.7 3.6E-18 1.2E-22 137.4 -1.2 76 59-134 3-78 (80)
23 1iyu_A E2P, dihydrolipoamide a 99.6 7.6E-16 2.6E-20 123.3 9.9 74 59-135 2-75 (79)
24 1gjx_A Pyruvate dehydrogenase; 99.6 2.7E-16 9.2E-21 126.6 4.5 77 58-135 2-78 (81)
25 2k7v_A Dihydrolipoyllysine-res 99.4 6.3E-15 2.2E-19 119.8 -0.8 72 59-136 3-74 (85)
26 1z6h_A Biotin/lipoyl attachmen 99.4 5.2E-13 1.8E-17 104.5 9.5 63 72-134 7-69 (72)
27 2kcc_A Acetyl-COA carboxylase 99.4 1.9E-13 6.6E-18 110.7 6.1 65 71-136 12-76 (84)
28 2jku_A Propionyl-COA carboxyla 99.4 9.2E-14 3.1E-18 115.1 2.8 80 54-133 11-94 (94)
29 2dn8_A Acetyl-COA carboxylase 99.4 1.5E-12 5.3E-17 108.9 9.0 62 72-134 25-86 (100)
30 2d5d_A Methylmalonyl-COA decar 99.3 7.9E-12 2.7E-16 98.1 9.8 62 72-133 13-74 (74)
31 1bdo_A Acetyl-COA carboxylase; 99.3 5.2E-12 1.8E-16 101.0 8.0 61 73-133 13-80 (80)
32 1dcz_A Transcarboxylase 1.3S s 99.3 7.9E-12 2.7E-16 99.0 8.7 62 72-133 16-77 (77)
33 2ejm_A Methylcrotonoyl-COA car 99.3 8.6E-12 2.9E-16 104.2 7.4 65 72-136 22-86 (99)
34 2eq9_C Pyruvate dehydrogenase 99.2 4.9E-12 1.7E-16 88.3 4.2 40 186-225 1-40 (41)
35 3rnm_E Lipoamide acyltransfera 99.2 3.7E-12 1.3E-16 95.3 3.4 43 184-226 6-48 (58)
36 3n6r_A Propionyl-COA carboxyla 99.2 1.7E-11 5.8E-16 135.2 9.5 62 72-133 620-681 (681)
37 2eq7_C 2-oxoglutarate dehydrog 99.2 6.4E-12 2.2E-16 87.2 3.2 38 188-225 2-39 (40)
38 2eq8_C Pyruvate dehydrogenase 99.2 9.1E-12 3.1E-16 86.5 3.9 37 188-224 2-38 (40)
39 3va7_A KLLA0E08119P; carboxyla 99.2 6E-11 2.1E-15 137.9 10.8 60 73-132 1176-1235(1236)
40 3hbl_A Pyruvate carboxylase; T 99.2 6.8E-11 2.3E-15 136.9 11.0 63 73-135 1086-1148(1150)
41 1w85_I Dihydrolipoyllysine-res 99.1 2.4E-11 8.1E-16 88.2 3.8 41 185-225 6-46 (49)
42 3u9t_A MCC alpha, methylcroton 99.1 6.2E-12 2.1E-16 138.6 0.0 64 72-135 610-673 (675)
43 1bal_A Dihydrolipoamide succin 99.1 2.6E-11 8.7E-16 88.7 3.2 42 184-225 8-49 (51)
44 2f60_K Pyruvate dehydrogenase 99.0 8.2E-11 2.8E-15 89.9 2.9 43 184-226 8-50 (64)
45 2coo_A Lipoamide acyltransfera 99.0 2.7E-10 9.1E-15 88.7 5.3 43 184-226 14-56 (70)
46 1w4i_A Pyruvate dehydrogenase 99.0 1.6E-10 5.5E-15 87.9 3.6 42 185-226 4-45 (62)
47 1zko_A Glycine cleavage system 98.9 2.3E-09 7.8E-14 94.3 7.4 71 60-136 38-116 (136)
48 2k32_A A; NMR {Campylobacter j 98.9 2E-09 6.8E-14 92.0 6.3 66 72-137 9-104 (116)
49 3bg3_A Pyruvate carboxylase, m 98.9 6.3E-10 2.2E-14 122.5 3.0 61 72-132 657-717 (718)
50 2qf7_A Pyruvate carboxylase pr 98.8 2.4E-09 8.4E-14 124.2 6.1 61 73-133 1104-1164(1165)
51 1onl_A Glycine cleavage system 98.5 2.1E-07 7.3E-12 80.9 7.0 72 59-136 28-107 (128)
52 3a7l_A H-protein, glycine clea 98.4 3.4E-07 1.2E-11 79.7 7.5 72 59-136 29-108 (128)
53 1hpc_A H protein of the glycin 98.4 1.1E-07 3.7E-12 83.1 4.1 72 59-136 28-107 (131)
54 3ne5_B Cation efflux system pr 98.0 9.5E-06 3.2E-10 84.1 8.4 65 72-136 129-242 (413)
55 2f1m_A Acriflavine resistance 98.0 4.3E-06 1.5E-10 81.6 5.0 64 73-136 31-167 (277)
56 3lnn_A Membrane fusion protein 98.0 8.9E-06 3E-10 82.3 7.3 64 73-136 66-206 (359)
57 3fpp_A Macrolide-specific effl 97.9 1E-05 3.5E-10 81.3 6.5 64 73-136 40-191 (341)
58 3klr_A Glycine cleavage system 97.9 1.7E-05 5.7E-10 68.5 6.4 62 73-134 32-101 (125)
59 3mxu_A Glycine cleavage system 97.7 4E-05 1.4E-09 67.4 6.3 63 73-135 54-124 (143)
60 3tzu_A GCVH, glycine cleavage 97.7 3.9E-05 1.3E-09 67.1 5.7 44 73-116 49-93 (137)
61 1vf7_A Multidrug resistance pr 97.7 2.3E-05 7.8E-10 79.9 4.8 63 73-135 52-173 (369)
62 3hgb_A Glycine cleavage system 97.4 0.00019 6.6E-09 63.8 6.3 44 73-116 59-103 (155)
63 4dk0_A Putative MACA; alpha-ha 97.2 1.6E-05 5.6E-10 80.5 -3.9 63 72-134 40-190 (369)
64 3na6_A Succinylglutamate desuc 96.7 0.003 1E-07 63.4 8.2 59 75-135 267-329 (331)
65 2dn8_A Acetyl-COA carboxylase 96.7 0.0007 2.4E-08 55.8 2.8 47 89-135 5-51 (100)
66 3cdx_A Succinylglutamatedesucc 96.6 0.0054 1.9E-07 62.1 8.8 60 73-135 276-339 (354)
67 3fmc_A Putative succinylglutam 96.5 0.0056 1.9E-07 62.3 8.5 59 74-134 299-363 (368)
68 1z6h_A Biotin/lipoyl attachmen 96.1 0.006 2E-07 46.5 4.8 33 103-135 1-33 (72)
69 1dcz_A Transcarboxylase 1.3S s 96.0 0.0071 2.4E-07 46.8 4.9 35 101-135 8-42 (77)
70 2d5d_A Methylmalonyl-COA decar 96.0 0.0089 3.1E-07 45.7 5.3 35 102-136 6-40 (74)
71 1f3z_A EIIA-GLC, glucose-speci 95.7 0.0099 3.4E-07 53.3 5.0 65 59-133 13-116 (161)
72 2k32_A A; NMR {Campylobacter j 95.7 0.012 4E-07 49.5 5.1 34 102-135 2-35 (116)
73 2gpr_A Glucose-permease IIA co 95.4 0.011 3.6E-07 52.8 3.9 65 59-133 8-111 (154)
74 2kcc_A Acetyl-COA carboxylase 95.3 0.012 4.2E-07 46.6 3.6 34 102-135 6-39 (84)
75 1ax3_A Iiaglc, glucose permeas 95.1 0.014 4.7E-07 52.5 3.7 58 72-133 20-116 (162)
76 2qj8_A MLR6093 protein; struct 95.0 0.043 1.5E-06 54.8 7.5 60 73-134 265-328 (332)
77 2f1m_A Acriflavine resistance 94.7 0.047 1.6E-06 52.6 6.6 55 81-136 3-57 (277)
78 2ejm_A Methylcrotonoyl-COA car 94.3 0.032 1.1E-06 45.7 3.8 36 101-136 14-49 (99)
79 2jku_A Propionyl-COA carboxyla 94.3 0.023 8E-07 46.0 2.8 36 101-136 25-60 (94)
80 1bdo_A Acetyl-COA carboxylase; 94.2 0.039 1.3E-06 42.9 4.0 35 102-136 5-46 (80)
81 2xha_A NUSG, transcription ant 93.6 0.065 2.2E-06 49.2 4.8 40 59-113 13-52 (193)
82 3lnn_A Membrane fusion protein 93.5 0.052 1.8E-06 54.3 4.5 56 81-136 36-92 (359)
83 3d4r_A Domain of unknown funct 93.5 0.074 2.5E-06 47.4 4.8 45 72-116 108-153 (169)
84 3fpp_A Macrolide-specific effl 93.3 0.073 2.5E-06 52.8 5.1 57 79-136 10-66 (341)
85 2l5t_A Lipoamide acyltransfera 93.0 0.048 1.7E-06 42.1 2.6 30 106-135 12-41 (77)
86 1qjo_A Dihydrolipoamide acetyl 92.8 0.12 4.1E-06 40.1 4.7 28 109-136 14-41 (80)
87 1k8m_A E2 component of branche 92.4 0.15 5.2E-06 41.1 4.9 29 108-136 17-45 (93)
88 2dnc_A Pyruvate dehydrogenase 92.2 0.14 4.7E-06 41.8 4.4 29 108-136 20-48 (98)
89 2auk_A DNA-directed RNA polyme 92.0 0.31 1.1E-05 44.8 7.0 45 77-123 63-107 (190)
90 1ghj_A E2, E2, the dihydrolipo 91.9 0.086 2.9E-06 40.9 2.7 31 106-136 12-42 (79)
91 3crk_C Dihydrolipoyllysine-res 91.8 0.15 5.3E-06 40.3 4.2 29 108-136 18-46 (87)
92 1gjx_A Pyruvate dehydrogenase; 91.8 0.13 4.6E-06 39.9 3.7 32 105-136 11-42 (81)
93 2dne_A Dihydrolipoyllysine-res 91.7 0.17 5.9E-06 42.1 4.5 29 108-136 20-48 (108)
94 1vf7_A Multidrug resistance pr 91.6 0.16 5.5E-06 51.2 5.2 55 81-136 24-78 (369)
95 3ne5_B Cation efflux system pr 91.5 0.19 6.4E-06 51.6 5.5 54 83-136 102-157 (413)
96 2k7v_A Dihydrolipoyllysine-res 91.5 0.012 4.3E-07 46.6 -2.7 35 102-136 3-37 (85)
97 2xhc_A Transcription antitermi 90.6 0.24 8.2E-06 49.9 5.1 48 77-130 62-138 (352)
98 1y8o_B Dihydrolipoyllysine-res 90.4 0.35 1.2E-05 41.5 5.3 29 108-136 40-68 (128)
99 4hvm_A Tlmii; PSI-biology, mid 90.4 4.2 0.00014 41.7 14.7 28 445-472 135-162 (493)
100 2xha_A NUSG, transcription ant 89.6 0.13 4.6E-06 47.1 2.1 46 80-131 85-158 (193)
101 4dk0_A Putative MACA; alpha-ha 88.2 0.11 3.7E-06 52.1 0.5 56 80-136 12-67 (369)
102 3our_B EIIA, phosphotransferas 87.1 1 3.5E-05 40.9 6.2 67 58-134 34-139 (183)
103 1iyu_A E2P, dihydrolipoamide a 86.9 0.38 1.3E-05 37.1 2.9 35 58-98 41-75 (79)
104 1pmr_A Dihydrolipoyl succinylt 86.3 0.12 4E-06 40.3 -0.4 29 107-135 14-42 (80)
105 3fot_A 15-O-acetyltransferase; 86.1 3.7 0.00013 43.4 10.9 39 285-323 280-321 (519)
106 1l5a_A Amide synthase, VIBH; n 86.0 12 0.00042 37.2 14.5 29 444-472 118-146 (436)
107 3n6r_A Propionyl-COA carboxyla 85.9 0.68 2.3E-05 50.7 5.3 36 101-136 612-647 (681)
108 3va7_A KLLA0E08119P; carboxyla 81.3 1.3 4.4E-05 51.8 5.3 35 102-136 1168-1202(1236)
109 3hbl_A Pyruvate carboxylase; T 81.3 1.3 4.4E-05 51.4 5.3 36 101-136 1077-1112(1150)
110 1l5a_A Amide synthase, VIBH; n 80.7 47 0.0016 32.9 16.5 162 284-472 210-402 (436)
111 3bg3_A Pyruvate carboxylase, m 80.5 1.1 3.8E-05 49.2 4.2 35 102-136 650-684 (718)
112 2gpr_A Glucose-permease IIA co 79.9 0.68 2.3E-05 41.0 1.8 58 72-132 87-153 (154)
113 3lu0_D DNA-directed RNA polyme 79.5 1.4 4.9E-05 51.1 4.7 36 77-114 1002-1037(1407)
114 2xhc_A Transcription antitermi 78.1 0.54 1.9E-05 47.3 0.7 51 80-131 125-198 (352)
115 3u9t_A MCC alpha, methylcroton 74.2 0.65 2.2E-05 50.8 0.0 35 102-136 603-637 (675)
116 2bco_A Succinylglutamate desuc 74.0 2.3 7.9E-05 42.5 4.0 50 78-134 279-328 (350)
117 2qf7_A Pyruvate carboxylase pr 74.0 2.3 8E-05 49.4 4.6 35 102-136 1096-1130(1165)
118 2dsj_A Pyrimidine-nucleoside ( 70.4 5.8 0.0002 40.7 6.1 44 96-140 323-397 (423)
119 1zy8_K Pyruvate dehydrogenase 68.7 1 3.5E-05 42.5 0.0 30 107-136 15-44 (229)
120 3h5q_A PYNP, pyrimidine-nucleo 68.6 6.2 0.00021 40.7 5.8 40 97-136 334-404 (436)
121 3our_B EIIA, phosphotransferas 68.2 2.8 9.6E-05 38.0 2.8 42 57-99 98-141 (183)
122 1brw_A PYNP, protein (pyrimidi 68.1 6.4 0.00022 40.6 5.8 44 95-138 329-403 (433)
123 3fmc_A Putative succinylglutam 66.0 5 0.00017 40.4 4.5 33 101-134 290-322 (368)
124 2tpt_A Thymidine phosphorylase 64.5 7.8 0.00027 40.0 5.7 42 96-137 335-407 (440)
125 2bgh_A Vinorine synthase; VS, 63.9 5.5 0.00019 40.5 4.4 30 444-473 152-181 (421)
126 3na6_A Succinylglutamate desuc 63.6 6.2 0.00021 39.1 4.6 34 101-135 257-290 (331)
127 3dva_I Dihydrolipoyllysine-res 62.4 1.6 5.4E-05 45.1 0.0 29 71-99 52-80 (428)
128 2vsq_A Surfactin synthetase su 61.4 73 0.0025 37.1 13.9 28 445-472 140-167 (1304)
129 2jgp_A Tyrocidine synthetase 3 61.4 1.4E+02 0.0047 30.3 14.8 166 285-475 306-511 (520)
130 2e1v_A Acyl transferase; BAHD 59.5 6.9 0.00023 40.1 4.2 29 444-472 162-190 (454)
131 2rkv_A Trichothecene 3-O-acety 59.5 6.2 0.00021 40.3 3.9 30 444-473 148-177 (451)
132 2xr7_A Malonyltransferase; xen 58.9 6.8 0.00023 40.1 4.1 29 444-472 157-185 (453)
133 1qpo_A Quinolinate acid phosph 58.7 6.7 0.00023 38.1 3.7 22 75-96 72-93 (284)
134 4g22_A Hydroxycinnamoyl-COA sh 57.9 8.5 0.00029 39.3 4.6 30 444-473 150-179 (439)
135 1f3z_A EIIA-GLC, glucose-speci 57.6 5.8 0.0002 35.2 2.8 27 72-98 92-118 (161)
136 1x1o_A Nicotinate-nucleotide p 56.5 6.3 0.00022 38.3 3.1 21 76-96 74-94 (286)
137 3tqv_A Nicotinate-nucleotide p 56.2 6.5 0.00022 38.2 3.1 21 76-96 77-97 (287)
138 3l0g_A Nicotinate-nucleotide p 56.0 6.9 0.00024 38.2 3.3 21 76-96 86-106 (300)
139 1o4u_A Type II quinolic acid p 54.8 6 0.0002 38.5 2.6 21 76-96 73-93 (285)
140 2b7n_A Probable nicotinate-nuc 53.4 9.2 0.00032 36.8 3.7 21 76-96 60-80 (273)
141 3gnn_A Nicotinate-nucleotide p 53.0 7.8 0.00027 37.8 3.1 21 76-96 88-108 (298)
142 3d4r_A Domain of unknown funct 52.3 11 0.00037 33.5 3.6 43 85-138 95-137 (169)
143 1ax3_A Iiaglc, glucose permeas 51.9 5.5 0.00019 35.4 1.7 28 72-99 92-119 (162)
144 3paj_A Nicotinate-nucleotide p 51.7 8.4 0.00029 38.0 3.1 22 75-96 109-130 (320)
145 1uou_A Thymidine phosphorylase 51.0 18 0.00063 37.6 5.7 42 95-136 366-436 (474)
146 1qap_A Quinolinic acid phospho 50.0 9.3 0.00032 37.3 3.1 22 75-96 86-107 (296)
147 3it5_A Protease LASA; metallop 48.3 20 0.0007 32.2 4.9 65 57-135 33-105 (182)
148 3h5q_A PYNP, pyrimidine-nucleo 46.6 9.9 0.00034 39.2 2.8 31 69-99 374-404 (436)
149 3cdx_A Succinylglutamatedesucc 46.5 21 0.00072 35.4 5.2 37 98-135 264-300 (354)
150 3it5_A Protease LASA; metallop 46.3 7.2 0.00025 35.2 1.6 26 72-97 79-104 (182)
151 2lmc_B DNA-directed RNA polyme 44.7 4.6 0.00016 31.9 -0.0 28 57-93 55-82 (84)
152 2vsq_A Surfactin synthetase su 44.6 1.4E+02 0.0049 34.6 12.7 163 285-472 231-426 (1304)
153 2jbm_A Nicotinate-nucleotide p 44.3 11 0.00037 36.8 2.6 20 77-96 74-93 (299)
154 2dsj_A Pyrimidine-nucleoside ( 43.7 14 0.00049 37.8 3.5 31 69-99 363-393 (423)
155 1brw_A PYNP, protein (pyrimidi 43.6 14 0.00049 37.9 3.5 31 69-99 371-401 (433)
156 1uou_A Thymidine phosphorylase 41.6 17 0.00058 37.8 3.7 29 71-99 408-436 (474)
157 1zko_A Glycine cleavage system 38.4 32 0.0011 29.5 4.3 33 104-136 39-72 (136)
158 3tuf_B Stage II sporulation pr 37.9 29 0.001 32.7 4.4 69 57-135 82-155 (245)
159 2hsi_A Putative peptidase M23; 37.7 15 0.00051 35.6 2.4 21 115-135 232-252 (282)
160 3tuf_B Stage II sporulation pr 37.6 14 0.0005 34.9 2.2 27 72-98 129-155 (245)
161 1qwy_A Peptidoglycan hydrolase 37.4 15 0.00052 35.6 2.4 22 115-136 239-260 (291)
162 1q9j_A PAPA5, polyketide synth 36.1 1.9E+02 0.0067 27.9 10.6 86 285-381 214-314 (422)
163 2hsi_A Putative peptidase M23; 34.9 34 0.0012 33.0 4.5 14 102-115 191-204 (282)
164 2tpt_A Thymidine phosphorylase 33.2 15 0.00051 37.9 1.6 31 69-99 376-406 (440)
165 1q9j_A PAPA5, polyketide synth 33.2 27 0.00094 34.3 3.6 28 445-472 117-144 (422)
166 4etm_A LMPTP, low molecular we 32.5 29 0.001 30.8 3.3 33 187-223 67-99 (173)
167 3nyy_A Putative glycyl-glycine 31.7 20 0.0007 34.0 2.2 20 116-135 183-202 (252)
168 3c2e_A Nicotinate-nucleotide p 31.2 20 0.00068 34.8 2.1 20 77-96 70-95 (294)
169 4hvm_A Tlmii; PSI-biology, mid 31.2 3.2E+02 0.011 27.2 11.5 93 283-381 216-328 (493)
170 1baz_A ARC repressor; transcri 30.6 68 0.0023 22.5 4.3 46 280-327 7-52 (53)
171 1jf8_A Arsenate reductase; ptp 30.5 34 0.0012 28.7 3.3 33 187-223 43-75 (131)
172 2qj8_A MLR6093 protein; struct 30.2 47 0.0016 32.4 4.7 34 101-135 257-290 (332)
173 1hpc_A H protein of the glycin 30.0 60 0.0021 27.5 4.7 33 104-136 30-63 (131)
174 2gu1_A Zinc peptidase; alpha/b 28.8 47 0.0016 33.0 4.4 70 57-136 233-305 (361)
175 3vr4_A V-type sodium ATPase ca 28.5 1.1E+02 0.0037 32.7 7.3 53 79-134 130-185 (600)
176 3rh0_A Arsenate reductase; oxi 27.9 40 0.0014 29.1 3.3 33 187-223 61-93 (148)
177 2gi4_A Possible phosphotyrosin 27.8 33 0.0011 29.8 2.8 33 187-223 50-82 (156)
178 1hcz_A Cytochrome F; electron 27.2 1.1E+02 0.0038 28.4 6.2 51 71-130 175-228 (252)
179 2gu1_A Zinc peptidase; alpha/b 26.9 28 0.00096 34.7 2.4 25 73-97 279-303 (361)
180 2fek_A Low molecular weight pr 25.9 45 0.0015 29.4 3.3 33 187-223 64-96 (167)
181 3csq_A Morphogenesis protein 1 25.8 18 0.00063 35.7 0.8 21 77-97 250-270 (334)
182 2jgp_A Tyrocidine synthetase 3 24.9 53 0.0018 33.5 4.2 30 444-473 214-243 (520)
183 2wmy_A WZB, putative acid phos 24.9 40 0.0014 29.0 2.7 32 187-222 50-81 (150)
184 2auk_A DNA-directed RNA polyme 24.8 35 0.0012 30.8 2.4 28 60-96 159-186 (190)
185 2l17_A Synarsc, arsenate reduc 24.7 33 0.0011 28.9 2.1 33 187-223 44-76 (134)
186 1onl_A Glycine cleavage system 24.5 50 0.0017 27.8 3.2 33 104-136 30-63 (128)
187 1jl3_A Arsenate reductase; alp 24.2 43 0.0015 28.3 2.7 33 187-223 43-75 (139)
188 3a7l_A H-protein, glycine clea 24.2 51 0.0018 27.8 3.2 33 104-136 31-64 (128)
189 2cwd_A Low molecular weight ph 24.2 46 0.0016 29.0 3.0 32 187-223 53-84 (161)
190 3lu0_D DNA-directed RNA polyme 24.1 17 0.00059 42.3 0.2 20 77-96 1106-1125(1407)
191 1p8a_A Protein tyrosine phosph 22.7 43 0.0015 28.6 2.4 33 187-223 48-80 (146)
192 1yw4_A Succinylglutamate desuc 22.4 17 0.00058 36.0 -0.2 35 79-113 278-317 (341)
193 3fot_A 15-O-acetyltransferase; 22.3 83 0.0028 32.9 5.0 31 444-474 178-208 (519)
194 4etn_A LMPTP, low molecular we 21.9 58 0.002 29.2 3.3 32 187-223 80-111 (184)
195 1d1q_A Tyrosine phosphatase (E 21.6 50 0.0017 28.7 2.7 31 187-222 57-87 (161)
196 2xhg_A Tyrocidine synthetase A 20.1 66 0.0022 32.1 3.6 61 258-332 15-75 (466)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=4e-91 Score=729.41 Aligned_cols=415 Identities=26% Similarity=0.376 Sum_probs=40.1
Q ss_pred eEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecChh
Q 011684 58 IREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETEA 137 (479)
Q Consensus 58 ~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~~ 137 (479)
.++|+||+||++|+||+|++|+|++||.|++||+||+||+||++++|+||++|+|.++++++|+.|.+|++|+.|+++++
T Consensus 2 ~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~ 81 (428)
T 3dva_I 2 AFEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGY 81 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeeEEcCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCCc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred hHHHHHhhhhccCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCccccChhHHHHHhhcCCCccccccCCCCCcc
Q 011684 138 EVAQAKAKAASAGAAAPASHPVTSTPVPAVSPPEPKK--VAESAPSGPRKTVATPYAKKLLKQHKVDINSVVGTGPFGRI 215 (479)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI 215 (479)
+...............+.+. ..+...+.+.+.+. ........+.++++||+|||||+|+||||++|+|||++|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v~gtG~~GrI 158 (428)
T 3dva_I 82 ENMTFKGQEQEEAKKEEKTE---TVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRV 158 (428)
T ss_dssp -------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCCCSTTSCC
T ss_pred cccccccccccccccCCCcc---cCCccccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHCCCCCCCCce
Confidence 43211100000000000000 00000000000000 00001112346799999999999999999999999999999
Q ss_pred chhhHHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHH
Q 011684 216 TPEDVEKAAGIAPSKSVAPSAAPAALPKPAPAAAPAAPLLPGSTVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDAL 294 (479)
Q Consensus 216 ~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l 294 (479)
+++||++|+......... .+ +.+. ...+............+++|+++|||+||++|.+| +++|||+++.+||+|+|
T Consensus 159 ~k~DV~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~evDvt~l 235 (428)
T 3dva_I 159 LKEDIDAFLAGGAKPAPA-AA-EEKA-APAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKL 235 (428)
T ss_dssp CTTTTTTTSCC---------------------------------------------------------------------
T ss_pred eHHHHHHHhhcccccccc-cc-cccc-ccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEEeHHHH
Confidence 999999997643211000 00 0000 00000000000111356899999999999999999 79999999999999999
Q ss_pred HHHHHHhCC------CCCCHHHHHHHHHHHHHhhCccccccccCC-CeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCH
Q 011684 295 DALYEKVKP------KGVTMTALLAKAAAMALVQHPVVNASCKDG-KSFTYNANINIAVAVAINGGLITPVLQDADKLDL 367 (479)
Q Consensus 295 ~~~~~~~k~------~~~s~~~~likAva~Al~~~P~~n~~~~~~-~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl 367 (479)
+++|+++|+ .++||++||+||+++||++||+||++|+++ ++|++|+++|+|+||++++||++|+|+++++++|
T Consensus 236 ~~~rk~~~~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl 315 (428)
T 3dva_I 236 VAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPI 315 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhhhhHhhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccCCCCCH
Confidence 999999874 269999999999999999999999999652 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccceeecCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEE
Q 011684 368 YLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVN 447 (479)
Q Consensus 368 ~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~ftpii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~ls 447 (479)
.+|+++++++.+++|+|+|.++|+++|||+|||+||||+++|+||+|+||++||++|+++++|+++ ||++++|++|+|+
T Consensus 316 ~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~-~g~i~~r~~m~ls 394 (428)
T 3dva_I 316 FALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVR-DGEIVAAPMLALS 394 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccceEeecCCCCceEEEccccEEEEEEE-CCEEEEeeeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999995 8999999999999
Q ss_pred EEecccccchHHHHHHHHHHHHHhcCCccccC
Q 011684 448 VTADHRIIYGADLAAFLQTFSKIVENPESLTL 479 (479)
Q Consensus 448 lt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll~ 479 (479)
|+||||+|||+|+++||++|+++||+|+.||+
T Consensus 395 ls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll 426 (428)
T 3dva_I 395 LSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426 (428)
T ss_dssp --------------------------------
T ss_pred EEecccccchHHHHHHHHHHHHHHhCHHHHhh
Confidence 99999999999999999999999999998875
No 2
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=1.5e-57 Score=443.44 Aligned_cols=216 Identities=27% Similarity=0.432 Sum_probs=209.0
Q ss_pred ccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCCC--CCCHHHHHHHHHHHHHhhCccccccccCC---Ce
Q 011684 262 PFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKPK--GVTMTALLAKAAAMALVQHPVVNASCKDG---KS 335 (479)
Q Consensus 262 p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~~--~~s~~~~likAva~Al~~~P~~n~~~~~~---~~ 335 (479)
|+++|||+||++|.+| +++|||+++.+||+|+|+++|+++|+. ++||+++++||+++||++||+||++|+++ ++
T Consensus 18 pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~ 97 (250)
T 3l60_A 18 PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHNVILNSTWVDSGEGPQ 97 (250)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHCGGGSEEEECTTTSCE
T ss_pred CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhhEEEeccCCCCe
Confidence 9999999999999999 699999999999999999999999865 78999999999999999999999999753 59
Q ss_pred eEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccceeecCCC
Q 011684 336 FTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPP 415 (479)
Q Consensus 336 i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~ftpii~~ 415 (479)
|++|+++|+|+||++++||++|||++++++++.+|+++++++.+++|+|+|.++|+++|||+|||+||||++.|+||+|+
T Consensus 98 i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~~ftpIinp 177 (250)
T 3l60_A 98 VHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPVINH 177 (250)
T ss_dssp EEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGGGTCSSCCCCCCT
T ss_pred EEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCCCCcceeEeeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCcccc
Q 011684 416 GQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLT 478 (479)
Q Consensus 416 ~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll 478 (479)
||++||++|+++++|+++ +|+++++++|+|+|+||||+|||+++|+||++|+++||+|+.|+
T Consensus 178 pq~aIL~vG~i~~~pv~~-~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~ 239 (250)
T 3l60_A 178 PEAAILGLGAIKPRPVVV-GGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETAL 239 (250)
T ss_dssp TCSEEEEECCCEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHT
T ss_pred CCceEEEecceEEEeEEE-CCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHh
Confidence 999999999999999986 78999999999999999999999999999999999999998775
No 3
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=1.1e-57 Score=447.84 Aligned_cols=222 Identities=29% Similarity=0.433 Sum_probs=212.8
Q ss_pred CCceeccchhhHHHHHHhhhccCccEEEEEEEEeccHHHHHHHHhCC------CCCCHHHHHHHHHHHHHhhCccccccc
Q 011684 257 GSTVVPFTTMQAAVSKNMIESLSVPTFRVGYPIITDALDALYEKVKP------KGVTMTALLAKAAAMALVQHPVVNASC 330 (479)
Q Consensus 257 ~~~~~p~s~~r~~ia~~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~------~~~s~~~~likAva~Al~~~P~~n~~~ 330 (479)
.++++|+++|||+|+++|.+|+++|||+++.+||+|+|+++|+++|+ .++||+++++||+++||++||+||++|
T Consensus 30 ~~~~~p~~~~rk~ia~~m~~S~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~ 109 (262)
T 2ii3_A 30 KDRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASV 109 (262)
T ss_dssp CCEEEECCGGGHHHHHHHHHGGGSCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHCGGGSEEE
T ss_pred CcceecCCHHHHHHHHHHHHhhhCCeEEEEEEEEhHHHHHHHHHHhhhhhhccCCccHHHHHHHHHHHHHHhChHhhEEE
Confidence 46789999999999999999988999999999999999999998764 489999999999999999999999999
Q ss_pred cCC-CeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccce
Q 011684 331 KDG-KSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRF 409 (479)
Q Consensus 331 ~~~-~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~f 409 (479)
+++ +++++|+++|+|+||++++||++|||+++++++|.+|+++++++.+++|+|+|.++|+++|||+|||+||+|++.|
T Consensus 110 ~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~~G~~~~ 189 (262)
T 2ii3_A 110 DENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYA 189 (262)
T ss_dssp CTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCCSCE
T ss_pred eCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCCCCccce
Confidence 754 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCcccc
Q 011684 410 DAILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLT 478 (479)
Q Consensus 410 tpii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll 478 (479)
+||+|+||+|||++|+++++|++++||+++++.+|+|+|+||||+|||+|+|+||++|+++||+|+.|+
T Consensus 190 tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll 258 (262)
T 2ii3_A 190 KPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFML 258 (262)
T ss_dssp ECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHH
T ss_pred ECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhCHHHHH
Confidence 999999999999999999999997678999999999999999999999999999999999999999775
No 4
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=2.2e-57 Score=441.66 Aligned_cols=221 Identities=28% Similarity=0.368 Sum_probs=212.4
Q ss_pred CceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCC------CCCCHHHHHHHHHHHHHhhCccccccc
Q 011684 258 STVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKP------KGVTMTALLAKAAAMALVQHPVVNASC 330 (479)
Q Consensus 258 ~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~------~~~s~~~~likAva~Al~~~P~~n~~~ 330 (479)
.+++|++++||.|+++|.+| +++|||+++.++|+|+|+++|+++|+ .++||+++++||+++||++||+||++|
T Consensus 15 ~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~ 94 (243)
T 1dpb_A 15 IEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKELPDFNSSL 94 (243)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHHHTTCCCCSHHHHHHHHHHHHHHSGGGGEEE
T ss_pred ceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhhhccCCCChHHHHHHHHHHHHHhChHhhEEE
Confidence 46789999999999999999 79999999999999999999988765 589999999999999999999999999
Q ss_pred cCC-CeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccce
Q 011684 331 KDG-KSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRF 409 (479)
Q Consensus 331 ~~~-~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~f 409 (479)
+++ +++++|+++|+|+||++++||++|||++++++++.+|+++++++.+++|+|+|.++|+++|||+|||+||+|++.|
T Consensus 95 ~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~~ 174 (243)
T 1dpb_A 95 APSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAF 174 (243)
T ss_dssp CTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTTTCCSCC
T ss_pred ecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccce
Confidence 753 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCccccC
Q 011684 410 DAILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLTL 479 (479)
Q Consensus 410 tpii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll~ 479 (479)
+||+|+||+|||++|+++++|+++ ||+++++++|+|+|+||||+|||+|+|+||++|+++||+|+.|++
T Consensus 175 tpIin~pq~aIl~vG~~~~~pv~~-~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 243 (243)
T 1dpb_A 175 TPIVNAPEVAILGVSKASMQPVWD-GKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL 243 (243)
T ss_dssp CCCCCTTSSEEEEECCCEEEEEEC-SSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred ECccCCCCCeEEEccccEEEEEEE-CCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHHhhhC
Confidence 999999999999999999999996 789999999999999999999999999999999999999998875
No 5
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=7.7e-58 Score=442.27 Aligned_cols=219 Identities=29% Similarity=0.443 Sum_probs=210.4
Q ss_pred CceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCC-------CCCCHHHHHHHHHHHHHhhCcccccc
Q 011684 258 STVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKP-------KGVTMTALLAKAAAMALVQHPVVNAS 329 (479)
Q Consensus 258 ~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~-------~~~s~~~~likAva~Al~~~P~~n~~ 329 (479)
.+++|++++||+||++|.+| +++|||+++.++|+|+|+++|+++|+ .++||+++++||+++||++||+||++
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 83 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEE
Confidence 35689999999999999999 78999999999999999999988764 48999999999999999999999999
Q ss_pred ccCCCeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccce
Q 011684 330 CKDGKSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRF 409 (479)
Q Consensus 330 ~~~~~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~f 409 (479)
|+ ++++++|+++|+|+||++++||++|||++++++++.+|+++++++.+++|+|+|.++|+++|||+|||+||+|++.|
T Consensus 84 ~~-~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~G~~~~ 162 (233)
T 1scz_A 84 ID-GDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 162 (233)
T ss_dssp EE-TTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGTCCCC
T ss_pred Ee-CCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCCCCccce
Confidence 97 56999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCcccc
Q 011684 410 DAILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLT 478 (479)
Q Consensus 410 tpii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll 478 (479)
+||+||||+|||++|+++++|+++ ||+++++++|+|+|+||||+|||+|+|+||+.|+++||+|+.|+
T Consensus 163 tpIin~pq~aIl~vG~~~~~pv~~-~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll 230 (233)
T 1scz_A 163 TPIINPPQSAILGMHAIKDRPMAV-NGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLL 230 (233)
T ss_dssp CCCCCTTCSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHH
T ss_pred EcccCCCCcEEEEccccEEEEEEE-CCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHHHh
Confidence 999999999999999999999996 78999999999999999999999999999999999999999775
No 6
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-57 Score=444.32 Aligned_cols=221 Identities=29% Similarity=0.380 Sum_probs=211.9
Q ss_pred CCCceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCC-------CCCCHHHHHHHHHHHHHhhCcccc
Q 011684 256 PGSTVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKP-------KGVTMTALLAKAAAMALVQHPVVN 327 (479)
Q Consensus 256 ~~~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~-------~~~s~~~~likAva~Al~~~P~~n 327 (479)
.+.+++|++++||+||++|.+| +++|||+++.+||+|+|+++|+++|+ .++||+++++||+++||++||+||
T Consensus 16 ~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~N 95 (256)
T 3mae_A 16 AGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLN 95 (256)
T ss_dssp CSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTS
T ss_pred CCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhh
Confidence 3467899999999999999999 69999999999999999999998773 479999999999999999999999
Q ss_pred ccccCCCeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCcc
Q 011684 328 ASCKDGKSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVD 407 (479)
Q Consensus 328 ~~~~~~~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~ 407 (479)
++|+ ++++++|+++|+|+||++++||++|||+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||||++
T Consensus 96 a~~~-~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~ 174 (256)
T 3mae_A 96 STWA-GDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSV 174 (256)
T ss_dssp EEEE-TTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGGGTCS
T ss_pred hEEe-cCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCCCCcc
Confidence 9996 469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCcccc
Q 011684 408 RFDAILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLT 478 (479)
Q Consensus 408 ~ftpii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll 478 (479)
.|+||+|+||++||++|+++++|+++ +|+++++++|+|+|+||||+|||+++|+||++|+++||+|+.|.
T Consensus 175 ~ftpIInppq~aIL~vG~i~~~pv~~-~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~~~ 244 (256)
T 3mae_A 175 QSMGIINHPQAAILQVESIVKRPVII-DDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKEN 244 (256)
T ss_dssp EEECCCCTTSSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTT
T ss_pred ceEcccCCCCceEEEecccEEEEEEE-CCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHHhChHHHH
Confidence 99999999999999999999999996 78999999999999999999999999999999999999998764
No 7
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-57 Score=441.73 Aligned_cols=221 Identities=31% Similarity=0.539 Sum_probs=211.8
Q ss_pred CceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCC-----CCCCHHHHHHHHHHHHHhhCcccccccc
Q 011684 258 STVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKP-----KGVTMTALLAKAAAMALVQHPVVNASCK 331 (479)
Q Consensus 258 ~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~-----~~~s~~~~likAva~Al~~~P~~n~~~~ 331 (479)
++++|++++||+||++|.+| +++|||+++.++|+|+|+++|+++|+ .++||+++++||+++||++||+||++|+
T Consensus 12 ~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~P~~Na~~~ 91 (239)
T 3b8k_A 12 FTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWM 91 (239)
T ss_dssp CCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTTSSCCCHHHHHHHHHHHHHHHCCCSCTTSC
T ss_pred ceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHhChHhhEEEE
Confidence 56789999999999999999 89999999999999999999998765 4899999999999999999999999996
Q ss_pred CCCeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccceee
Q 011684 332 DGKSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDA 411 (479)
Q Consensus 332 ~~~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~ftp 411 (479)
++++++|+++|+|+||++++||++|+|+++++++|.+|+++++++.+++|+|+|.++|+++|||+|||+||+|++.|+|
T Consensus 92 -~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~ftp 170 (239)
T 3b8k_A 92 -DTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSA 170 (239)
T ss_dssp -CCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCSSCCSSCCC
T ss_pred -CCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCceeEEC
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceEEEeCcceEEEEEc-CCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCccccC
Q 011684 412 ILPPGQGAIMAVGASKPTVVAD-ADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLTL 479 (479)
Q Consensus 412 ii~~~~~ail~vG~~~~~~v~~-~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll~ 479 (479)
|+|+||++||++|+++++|+++ +||+++++.+|+|+|+||||+|||+|+|+||++|+++||+|+.|++
T Consensus 171 iin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 239 (239)
T 3b8k_A 171 IINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 239 (239)
T ss_dssp CCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred cCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHhhhC
Confidence 9999999999999999999984 4788999999999999999999999999999999999999998875
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.6e-56 Score=426.35 Aligned_cols=213 Identities=24% Similarity=0.378 Sum_probs=203.7
Q ss_pred CceeccchhhHHHHHHhhhc-cCccEEEEEEEEeccHHHHHHHHhCCC--CCCHHHHHHHHHHHHHhhCccccccccCC-
Q 011684 258 STVVPFTTMQAAVSKNMIES-LSVPTFRVGYPIITDALDALYEKVKPK--GVTMTALLAKAAAMALVQHPVVNASCKDG- 333 (479)
Q Consensus 258 ~~~~p~s~~r~~ia~~m~~S-~~vP~~~~~~~iDvt~l~~~~~~~k~~--~~s~~~~likAva~Al~~~P~~n~~~~~~- 333 (479)
.+++|++++||+||++|.+| +++|||+++.++|+|+|+++|+++|++ ++||+++++||+++||++||+||++|+++
T Consensus 6 ~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~~N~~~~~~~ 85 (224)
T 3rqc_A 6 EEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPYLNAIYDETR 85 (224)
T ss_dssp CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGGGSBBCCSST
T ss_pred ceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhheEEeCCC
Confidence 56899999999999999999 899999999999999999999999874 78999999999999999999999999643
Q ss_pred CeeEEcCcccEEEEEEeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccceeecC
Q 011684 334 KSFTYNANINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAIL 413 (479)
Q Consensus 334 ~~i~~~~~i~i~~aV~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~ftpii 413 (479)
+++++|+++|+|+||++++||++|||++++++++.+|+++++++.+++|+|+|.++|+++|||+|||+||+|++.|+||+
T Consensus 86 ~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~~G~~~~tpii 165 (224)
T 3rqc_A 86 RVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGTIGGIMSTPII 165 (224)
T ss_dssp TCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTTTCCSEEECCC
T ss_pred CEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCcCCccceEecc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCccccC
Q 011684 414 PPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESLTL 479 (479)
Q Consensus 414 ~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~ll~ 479 (479)
|+||++||++|+++++++ +++|+|+|+||||+|||+|+|+||++|+++||+|+.|++
T Consensus 166 n~pq~aIl~vG~~~~~p~---------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~ 222 (224)
T 3rqc_A 166 NYPEVAILGVHRILEREG---------RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIY 222 (224)
T ss_dssp CTTBSEEEEECCCEEETT---------EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTTC
T ss_pred CCCCceEEEecccEEECC---------ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999998742 789999999999999999999999999999999998875
No 9
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=1.9e-42 Score=331.65 Aligned_cols=201 Identities=11% Similarity=0.104 Sum_probs=176.8
Q ss_pred eeccchhhHHHHHHhhhccCccEEEEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEc
Q 011684 260 VVPFTTMQAAVSKNMIESLSVPTFRVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYN 339 (479)
Q Consensus 260 ~~p~s~~r~~ia~~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~ 339 (479)
.+.+..--|+---..-++.++|||+++.++|+|+|+++|++. ++||+++++||+++||++||+||++|+ ++++++|
T Consensus 10 ~id~~~W~R~~~f~~f~~~~~P~~t~~~evDvt~l~~~rk~~---~ls~~~~~ikAv~~Al~~~P~~Na~~~-~~~i~~~ 85 (219)
T 1q23_A 10 TVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKN---KHKFYPAFIHILARLMNAHPEFRMAMK-DGELVIW 85 (219)
T ss_dssp ECCGGGCTTHHHHHHHTTTTCEEEEEEEEEECHHHHHHHHHT---TCCHHHHHHHHHHHHHTTCGGGSEEEE-TTEEEEE
T ss_pred eECcccCCCHHHHHHhcCCCCcEEEEEEEEEhHHHHHHHHHc---CCCHHHHHHHHHHHHHHhChHhhEEEE-CCEEEEe
Confidence 344555444444444477899999999999999999999764 899999999999999999999999997 5699999
Q ss_pred CcccEEEEE-EeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcC-CCCC-CCCCCCeEEEeecCCCCccceeecCCCC
Q 011684 340 ANINIAVAV-AINGGLITPVLQDADKLDLYLLSQKWKELVEKARSK-QLQP-HEYNSGTFTLSNLGMFGVDRFDAILPPG 416 (479)
Q Consensus 340 ~~i~i~~aV-~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~-~l~~-~d~~~~tftISnlg~~G~~~ftpii~~~ 416 (479)
+++|+|+|| ++++||++||+.. +.+++.+|+++++++++++|++ +|.+ +++ ||||+|||+||+|++.+.+.++++
T Consensus 86 ~~v~igiAV~~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~~~ft~i~~~~~~~ 163 (219)
T 1q23_A 86 DSVHPCYTVFHEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPWVSFTSFDLNVANM 163 (219)
T ss_dssp SCCEEEEEEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTTCCCSEEEEEESCC
T ss_pred cccCeEEEEEecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCccccccccccCCCCC
Confidence 999999999 9999999999885 6789999999999999999998 5965 888 999999999999888877666554
Q ss_pred C---ceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCc
Q 011684 417 Q---GAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPE 475 (479)
Q Consensus 417 ~---~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~ 475 (479)
. ++||++|+++++ +| +.+|||+|+||||+|||+|+|+||++|+++||+|.
T Consensus 164 ~~~~~pIi~~G~~~~~-----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~~ 216 (219)
T 1q23_A 164 DNFFAPVFTMGKYYTQ-----GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ 216 (219)
T ss_dssp TTCCSCEEEECCCEEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccceeEEEecccEEEE-----CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCcc
Confidence 3 599999999876 56 68999999999999999999999999999999863
No 10
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=4e-42 Score=328.12 Aligned_cols=197 Identities=12% Similarity=0.131 Sum_probs=173.4
Q ss_pred cchhhHHHHHHhhhccCccEEEEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCcc
Q 011684 263 FTTMQAAVSKNMIESLSVPTFRVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNANI 342 (479)
Q Consensus 263 ~s~~r~~ia~~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~i 342 (479)
+..--|+---..-++.++|||+++.++|+|+|+++|++ .++||+++++||+++||++||+||++|+ ++++++|+++
T Consensus 8 ~~~W~R~~~f~~f~~~~~P~~~~~~evDvt~l~~~rk~---~~ls~~~~~ikAv~~Al~~~P~~Na~~~-~~~i~~~~~v 83 (213)
T 3cla_A 8 VKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDD---SAYKFYPVMIYLIAQAVNQFDELRMAIK-DDELIVWDSV 83 (213)
T ss_dssp CTTCTTHHHHHHHHHTSCCEEEEEEEEECHHHHHHHHT---SSCCHHHHHHHHHHHHHTTCGGGSEEEE-TTEEEEESCC
T ss_pred cccCCcHHHHHHHhCCCCceEEEEEEEEHHHHHHHHHH---hCCCHHHHHHHHHHHHHhhCHHhhEEEE-CCEEEEEecc
Confidence 33434444444456689999999999999999999865 3899999999999999999999999997 5699999999
Q ss_pred cEEEEE-EeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcC-CCCC-CCCCCCeEEEeecCCCCccceeecCCCC---
Q 011684 343 NIAVAV-AINGGLITPVLQDADKLDLYLLSQKWKELVEKARSK-QLQP-HEYNSGTFTLSNLGMFGVDRFDAILPPG--- 416 (479)
Q Consensus 343 ~i~~aV-~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~-~l~~-~d~~~~tftISnlg~~G~~~ftpii~~~--- 416 (479)
|+|+|| ++++||++||+.. +.+++.+|+++++++++++|++ +|.+ +|++||||+|||+||++++.|+...+.+
T Consensus 84 ~igiAVf~t~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~~~ft~i~~~~~~g~~~ 162 (213)
T 3cla_A 84 DPQFTVFHQETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDY 162 (213)
T ss_dssp EEEEEEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCCCSCCCCCCSCCTTC
T ss_pred ceeEEEEeCCCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCCCCcccccccCCCCCcc
Confidence 999999 9999999999886 6789999999999999999995 9977 7899999999999999988886433333
Q ss_pred CceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcC
Q 011684 417 QGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVEN 473 (479)
Q Consensus 417 ~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~ 473 (479)
..+|+++|+++++ +| +.+|||+|+||||+|||+|+|+||++|+++||+
T Consensus 163 ~~PIi~~G~~~~~-----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 163 FAPIITMAKYQQE-----GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp CSCEEEEECCEEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred cccEEEeeEEEEE-----CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 2589999999876 56 689999999999999999999999999999998
No 11
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.4e-43 Score=405.56 Aligned_cols=205 Identities=23% Similarity=0.339 Sum_probs=170.7
Q ss_pred HhhhccCccEEEEEEEEeccHHHHHHHHhCC-------CCCCHHHHHHHHHHHHHhhCccccccccCCC---eeEEcCcc
Q 011684 273 NMIESLSVPTFRVGYPIITDALDALYEKVKP-------KGVTMTALLAKAAAMALVQHPVVNASCKDGK---SFTYNANI 342 (479)
Q Consensus 273 ~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~-------~~~s~~~~likAva~Al~~~P~~n~~~~~~~---~i~~~~~i 342 (479)
+|.+|+++|||+++.+||+|+|+++|+++|+ .++||++|++||+++||++||+||++|++++ .+++|++|
T Consensus 1 ~m~~S~~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~v 80 (1113)
T 2xt6_A 1 GMNASLEVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAHT 80 (1113)
T ss_dssp ------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSSC
T ss_pred ChhhhccCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCcc
Confidence 5888989999999999999999999998764 3899999999999999999999999997432 79999999
Q ss_pred cEEEEEEeC--CC---eEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCCeEEEeecCCCCccceeecCCCCC
Q 011684 343 NIAVAVAIN--GG---LITPVLQDADKLDLYLLSQKWKELVEKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQ 417 (479)
Q Consensus 343 ~i~~aV~~~--~g---l~~pvi~~a~~~sl~ei~~~~~~l~~~ar~~~l~~~d~~~~tftISnlg~~G~~~ftpii~~~~ 417 (479)
|||+||+++ +| |++|||+++++++|.+|+++++++++++|+|+|+++|+++|||+|||+||+|++.|+||+||||
T Consensus 81 nigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~~G~~~~tPIinppq 160 (1113)
T 2xt6_A 81 NLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTLGTVHSVPRLMQGQ 160 (1113)
T ss_dssp CEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC------------CTTC
T ss_pred cEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCcCCCcceECCCCCCC
Confidence 999999997 66 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCcceEEEEEcCC-----CeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCccc
Q 011684 418 GAIMAVGASKPTVVADAD-----GFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVENPESL 477 (479)
Q Consensus 418 ~ail~vG~~~~~~v~~~~-----G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p~~l 477 (479)
++||++|+++++|+++.+ |+++++++|+|+|+||||||||+++|+||++|+++||+|+.|
T Consensus 161 ~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~w 225 (1113)
T 2xt6_A 161 GAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFF 225 (1113)
T ss_dssp SEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred ceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999888531 678899999999999999999999999999999999999755
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.5e-41 Score=320.70 Aligned_cols=197 Identities=11% Similarity=0.107 Sum_probs=172.5
Q ss_pred ccchhhHHHHHHhhhccCccEEEEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCc
Q 011684 262 PFTTMQAAVSKNMIESLSVPTFRVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNAN 341 (479)
Q Consensus 262 p~s~~r~~ia~~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~ 341 (479)
.+..--|+---..-.+.++|||+++.++|+|+|+++|++. ++||+++++||+++||++||+||++|++++++++|++
T Consensus 9 d~~~W~R~~~f~~f~~~~~P~~~~~~evDvt~l~~~rk~~---~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~ 85 (217)
T 2i9d_A 9 DIENWERKENFNFFRHFQNPQLSITSEVECGGARQRAKAA---GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDT 85 (217)
T ss_dssp CSSSSTTHHHHHHHTTCSBCEEEEEEEEECHHHHHHHHHT---TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESC
T ss_pred ChhhCCCHHHHHHHhCCCCceEEEEEEEEhHHHHHHHHHc---CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecc
Confidence 3444444444444566899999999999999999998764 8999999999999999999999999963568999999
Q ss_pred ccEEEEE-EeCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHc-CCCCCC------CCCCCeEEEeecCCCCccceeecC
Q 011684 342 INIAVAV-AINGGLITPVLQDADKLDLYLLSQKWKELVEKARS-KQLQPH------EYNSGTFTLSNLGMFGVDRFDAIL 413 (479)
Q Consensus 342 i~i~~aV-~~~~gl~~pvi~~a~~~sl~ei~~~~~~l~~~ar~-~~l~~~------d~~~~tftISnlg~~G~~~ftpii 413 (479)
+|+|+|| ++++||++|++. ++.+++.+|+++++++++++|+ ++|.++ |+++|||+|||+||++++.|+...
T Consensus 86 i~igvAVf~t~~GL~~pv~~-~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~~~ft~i~~~~ 164 (217)
T 2i9d_A 86 IDMLSPIKIKENGKFFTTRF-PYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGTQ 164 (217)
T ss_dssp CEEEEEEECSTTSCEEEEEE-CCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEECCCB
T ss_pred cCeEEEEEecCCceEeEEEe-cCCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCccccceeecCC
Confidence 9999999 999999999986 5778999999999999999998 599885 899999999999999988886444
Q ss_pred CCC---CceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHh
Q 011684 414 PPG---QGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIV 471 (479)
Q Consensus 414 ~~~---~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~l 471 (479)
+++ ..+||++|+++++ +| |.+|||+|+||||+|||+|+|+||+.|+++|
T Consensus 165 ~~g~~~~~PIi~~Gk~~~~-----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 165 EKRSGNNYPLLNAGKAIIR-----EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp CSTTCCSSCEEEECCCEEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred CCCccceEEEEecceEEEE-----CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 433 2589999999876 56 7899999999999999999999999999987
No 13
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.97 E-value=8.9e-32 Score=258.42 Aligned_cols=167 Identities=33% Similarity=0.540 Sum_probs=38.5
Q ss_pred eeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCe-ecCCCeEEEEecC
Q 011684 57 KIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGES-APVGAAIGILAET 135 (479)
Q Consensus 57 ~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~-v~~G~~l~~i~~~ 135 (479)
+.++|+||+||++|++|+|++|+|++||.|++||+||+||+||++++|+||++|+|.++++++|+. |.+|++|++|.+.
T Consensus 2 ~~~ei~mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~ 81 (229)
T 1zy8_K 2 DPIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 81 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeEecCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEecc
Confidence 456899999999999999999999999999999999999999999999999999999999999997 9999999999754
Q ss_pred hhhHHHHHhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccChhHHHHHhhcCCCccccccCCCCCcc
Q 011684 136 EAEVAQAKAKAASAGAAAPASHPVTSTPVPAVSPPEPKKVAESAPSGPRKTVATPYAKKLLKQHKVDINSVVGTGPFGRI 215 (479)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI 215 (479)
+++............ ..+....+.+. ..+.+...............++++||+|||||+|+||||++|.|||++|||
T Consensus 82 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~asP~vRklAre~gVDL~~V~GTGp~GRI 158 (229)
T 1zy8_K 82 GEDWKHVEIPKDVGP-PPPVSKPSEPR--PSPEPQISIPVKKEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPRGIF 158 (229)
T ss_dssp ---------------------------------------------------CBCHHHHHHHHHTTCCSSSSCCCSTTSCB
T ss_pred Ccccccccccccccc-ccccccCCCcc--cccccccCCCcccccccccccccCChHHHHHHHHcCCCccccCCCCCCCce
Confidence 432111000000000 00000000000 000000000000000011136789999999999999999999999999999
Q ss_pred chhhHHHhhcc
Q 011684 216 TPEDVEKAAGI 226 (479)
Q Consensus 216 ~~~DV~~~~~~ 226 (479)
+++||++|+..
T Consensus 159 tk~DV~~~~~~ 169 (229)
T 1zy8_K 159 TKEDALKLVQL 169 (229)
T ss_dssp CHHHHHHHHHH
T ss_pred ehHHHHHHHhh
Confidence 99999999853
No 14
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=153.06 Aligned_cols=87 Identities=34% Similarity=0.585 Sum_probs=81.1
Q ss_pred ceeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCC-eecCCCeEEEEec
Q 011684 56 SKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGE-SAPVGAAIGILAE 134 (479)
Q Consensus 56 ~~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~-~v~~G~~l~~i~~ 134 (479)
++.++|+||+||++|.+|+|++|+|++||.|++||+||+||+||++++|+||++|+|.++++++|+ .|..|++|++|.+
T Consensus 5 p~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~ 84 (108)
T 2dne_A 5 SSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVG 84 (108)
T ss_dssp CCCEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEES
T ss_pred ccceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEec
Confidence 356899999999999999999999999999999999999999999999999999999999999999 8999999999998
Q ss_pred ChhhHHHH
Q 011684 135 TEAEVAQA 142 (479)
Q Consensus 135 ~~~~~~~~ 142 (479)
.+++...+
T Consensus 85 ~~~~~~~~ 92 (108)
T 2dne_A 85 KPEDIEAF 92 (108)
T ss_dssp CHHHHHHH
T ss_pred Cccchhhh
Confidence 77665443
No 15
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.79 E-value=7.3e-19 Score=153.65 Aligned_cols=85 Identities=39% Similarity=0.677 Sum_probs=79.7
Q ss_pred cceeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCC-eecCCCeEEEEe
Q 011684 55 QSKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGE-SAPVGAAIGILA 133 (479)
Q Consensus 55 ~~~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~-~v~~G~~l~~i~ 133 (479)
.++..+|+||+||++|.+|+|++|+|++||.|++||+||+||+||++++|+||++|+|.++++++|+ .|.+|++|++|.
T Consensus 24 ~p~~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~ 103 (128)
T 1y8o_B 24 YPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIV 103 (128)
T ss_dssp CCSEEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEE
T ss_pred CCcceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEe
Confidence 3457899999999999999999999999999999999999999999999999999999999999998 899999999998
Q ss_pred cChhhH
Q 011684 134 ETEAEV 139 (479)
Q Consensus 134 ~~~~~~ 139 (479)
+.+++.
T Consensus 104 ~~~~~~ 109 (128)
T 1y8o_B 104 EKEADI 109 (128)
T ss_dssp SSGGGG
T ss_pred cCccch
Confidence 766543
No 16
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.78 E-value=8.3e-19 Score=143.53 Aligned_cols=81 Identities=40% Similarity=0.676 Sum_probs=77.1
Q ss_pred eeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCC-eecCCCeEEEEecC
Q 011684 57 KIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGE-SAPVGAAIGILAET 135 (479)
Q Consensus 57 ~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~-~v~~G~~l~~i~~~ 135 (479)
+..+|.||++|+++.+|+|.+|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+ .|..|++|+.|.+.
T Consensus 4 ~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~~ 83 (87)
T 3crk_C 4 PHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEK 83 (87)
T ss_dssp CEEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESS
T ss_pred cceEEeCCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEcc
Confidence 46789999999999999999999999999999999999999999999999999999999999999 89999999999865
Q ss_pred hh
Q 011684 136 EA 137 (479)
Q Consensus 136 ~~ 137 (479)
++
T Consensus 84 ~~ 85 (87)
T 3crk_C 84 EA 85 (87)
T ss_dssp ST
T ss_pred cC
Confidence 43
No 17
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=7.3e-19 Score=147.11 Aligned_cols=82 Identities=44% Similarity=0.730 Sum_probs=77.7
Q ss_pred ceeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCee-cCCCeEEEEec
Q 011684 56 SKIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESA-PVGAAIGILAE 134 (479)
Q Consensus 56 ~~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v-~~G~~l~~i~~ 134 (479)
.+.++|+||++|++|.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+.| ..|++|+.|..
T Consensus 5 ~~~~~i~~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~ 84 (98)
T 2dnc_A 5 SSGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 84 (98)
T ss_dssp CCCEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEEC
T ss_pred cccEEEECCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEec
Confidence 36679999999999999999999999999999999999999999999999999999999999999998 99999999986
Q ss_pred Chh
Q 011684 135 TEA 137 (479)
Q Consensus 135 ~~~ 137 (479)
.++
T Consensus 85 ~~~ 87 (98)
T 2dnc_A 85 EGE 87 (98)
T ss_dssp TTS
T ss_pred CCC
Confidence 543
No 18
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.76 E-value=1.9e-18 Score=143.15 Aligned_cols=79 Identities=23% Similarity=0.403 Sum_probs=76.0
Q ss_pred eeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 57 KIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 57 ~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
+.++|.||++|+++.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 3 ~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~~ 81 (93)
T 1k8m_A 3 QVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETE 81 (93)
T ss_dssp CCEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEECS
T ss_pred cceEEEcCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEecC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999753
No 19
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.72 E-value=1.2e-17 Score=133.86 Aligned_cols=76 Identities=32% Similarity=0.596 Sum_probs=73.8
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
++|+||++|+++.+|+|.+|++++||.|++||+|+++|+||+..+|+||++|+|.++++++|+.|..|++|+.|..
T Consensus 2 ~~i~~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred cEEECCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999864
No 20
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.67 E-value=1e-16 Score=127.72 Aligned_cols=75 Identities=31% Similarity=0.546 Sum_probs=73.1
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
.+|+||++|+++..|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|.
T Consensus 2 ~~i~~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 2 YEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EEEECCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred eEEECCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999985
No 21
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.67 E-value=1.3e-16 Score=127.96 Aligned_cols=75 Identities=25% Similarity=0.457 Sum_probs=72.4
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
++|.||++|++ +|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 3 ~~i~~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 3 KEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp EEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred eEEECCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 58999999998 9999999999999999999999999999999999999999999999999999999999999764
No 22
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.66 E-value=3.6e-18 Score=137.41 Aligned_cols=76 Identities=30% Similarity=0.577 Sum_probs=73.3
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
.+|+||++|+++.+|+|.+|++++||.|++||+||+||+||+.++|+||++|+|.++++++|+.|..|++|+.|..
T Consensus 3 ~~i~~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 3 VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred cEEEcCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999998864
No 23
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.64 E-value=7.6e-16 Score=123.34 Aligned_cols=74 Identities=26% Similarity=0.410 Sum_probs=70.6
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
.+|.||++|++ + +|.+|++++||.|++||+|++||+||+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 2 ~~i~~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 2 EIIRVPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp EEEECCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred cEEECCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 37899999996 7 99999999999999999999999999999999999999999999999999999999999754
No 24
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.61 E-value=2.7e-16 Score=126.55 Aligned_cols=77 Identities=22% Similarity=0.394 Sum_probs=73.1
Q ss_pred eEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 58 IREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 58 ~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
.++|.||++| ++..|+|.+|++++||.|++||+|++||+||+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 2 ~~~i~~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 2 LVELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp CEECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred cEEEEcCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 4579999999 6899999999999999999999999999999999999999999999999999999999999999653
No 25
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.44 E-value=6.3e-15 Score=119.75 Aligned_cols=72 Identities=25% Similarity=0.452 Sum_probs=67.7
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
++|++|.+ |+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...+
T Consensus 3 ~~i~~p~~------G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~~ 74 (85)
T 2k7v_A 3 KEVNVPDI------VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 74 (85)
T ss_dssp SCCCCCSC------CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECCS
T ss_pred cEEECCCe------EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcCC
Confidence 36788977 8999999999999999999999999999999999999999999999999999999999997643
No 26
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.43 E-value=5.2e-13 Score=104.45 Aligned_cols=63 Identities=24% Similarity=0.354 Sum_probs=61.1
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
.|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|.+
T Consensus 7 ~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 7 AGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGG
T ss_pred cEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeC
Confidence 499999999999999999999999999999999999999999999999999999999999965
No 27
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.41 E-value=1.9e-13 Score=110.75 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=61.4
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 71 TEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 71 ~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|+|.+|++++||.|++||+|++||+||+.++|+||++|+|.+++ ++|+.|..|++|+.|.+..
T Consensus 12 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~ 76 (84)
T 2kcc_A 12 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDD 76 (84)
T ss_dssp SSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCC
Confidence 3499999999999999999999999999999999999999999999 9999999999999997643
No 28
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.39 E-value=9.2e-14 Score=115.12 Aligned_cols=80 Identities=18% Similarity=0.340 Sum_probs=29.1
Q ss_pred ecceeEEEecCCCCCCC----ceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeE
Q 011684 54 VQSKIREIFMPALSSTM----TEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAI 129 (479)
Q Consensus 54 ~~~~~~~i~~P~l~~~~----~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l 129 (479)
+.....+|.+|...... ..|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++.+++|+.|..|++|
T Consensus 11 ~~~~~~~v~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L 90 (94)
T 2jku_A 11 VDLGTENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLL 90 (94)
T ss_dssp -------------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC--------------------------------
T ss_pred ccccCEEEEcCCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEE
Confidence 34456688899888764 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEe
Q 011684 130 GILA 133 (479)
Q Consensus 130 ~~i~ 133 (479)
+.|+
T Consensus 91 ~~ie 94 (94)
T 2jku_A 91 VELE 94 (94)
T ss_dssp ----
T ss_pred EEEC
Confidence 9873
No 29
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.5e-12 Score=108.89 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=60.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
.|+|.+|++++||.|++||+|+++|+||+..+|+||++|+|. +++++|+.|..|++|+.|.+
T Consensus 25 ~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~ 86 (100)
T 2dn8_A 25 AGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLEL 86 (100)
T ss_dssp CEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECC
T ss_pred CEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEc
Confidence 399999999999999999999999999999999999999999 99999999999999999964
No 30
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.31 E-value=7.9e-12 Score=98.05 Aligned_cols=62 Identities=27% Similarity=0.474 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
.|+|.+|++++||.|++||+|++++++|+..+|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 13 ~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 13 PGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 39999999999999999999999999999999999999999999999999999999999873
No 31
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.30 E-value=5.2e-12 Score=101.04 Aligned_cols=61 Identities=20% Similarity=0.329 Sum_probs=57.7
Q ss_pred EEEEE-------EEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 73 GKIVS-------WIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 73 g~i~~-------w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
|+|.+ |++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 13 G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 13 GTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred eEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 67766 59999999999999999999999999999999999999999999999999999873
No 32
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.29 E-value=7.9e-12 Score=99.04 Aligned_cols=62 Identities=23% Similarity=0.434 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
.|+|.+|++++||.|++||+|++|+++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 16 ~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 16 AGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 39999999999999999999999999999999999999999999999999999999999873
No 33
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.25 E-value=8.6e-12 Score=104.16 Aligned_cols=65 Identities=23% Similarity=0.330 Sum_probs=62.2
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
.|+|.+|++++||.|++||+|++|+++|+..+|+||++|+|.++++++|+.|..|++|+.|.+.+
T Consensus 22 ~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~ 86 (99)
T 2ejm_A 22 TGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEE 86 (99)
T ss_dssp SEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCC
T ss_pred CEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCC
Confidence 39999999999999999999999999999999999999999999999999999999999997644
No 34
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=99.24 E-value=4.9e-12 Score=88.32 Aligned_cols=40 Identities=40% Similarity=0.654 Sum_probs=37.4
Q ss_pred cccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhc
Q 011684 186 TVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAG 225 (479)
Q Consensus 186 ~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~ 225 (479)
+.+||+||+||+|+||||+.|.|||++|||+++||++|+.
T Consensus 1 ~~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~~ 40 (41)
T 2eq9_C 1 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE 40 (41)
T ss_dssp CCBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHHC
T ss_pred CCCChHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHhc
Confidence 3579999999999999999999999999999999999864
No 35
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=99.23 E-value=3.7e-12 Score=95.30 Aligned_cols=43 Identities=37% Similarity=0.556 Sum_probs=39.2
Q ss_pred CccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhcc
Q 011684 184 RKTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAGI 226 (479)
Q Consensus 184 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~ 226 (479)
.++.+||+||+||+|+||||+.|+|||++|||+++||++|+..
T Consensus 6 ~~v~aSPaaRrlA~e~gIdl~~V~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 6 RKTLATPAVRNLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp --CCCCHHHHHHHHHTTCCGGGCCCCSGGGCCCHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHHhh
Confidence 4679999999999999999999999999999999999999753
No 36
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.22 E-value=1.7e-11 Score=135.24 Aligned_cols=62 Identities=23% Similarity=0.274 Sum_probs=60.3
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
-|+|++|+|++||+|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 620 ~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 620 PGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred cEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999999883
No 37
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=99.20 E-value=6.4e-12 Score=87.25 Aligned_cols=38 Identities=39% Similarity=0.504 Sum_probs=35.0
Q ss_pred cChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhc
Q 011684 188 ATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAG 225 (479)
Q Consensus 188 asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~ 225 (479)
+||+||+||+|+||||+.|.|||++|||+++||++|+.
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~~ 39 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHLE 39 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC--
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHhc
Confidence 69999999999999999999999999999999998753
No 38
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=99.20 E-value=9.1e-12 Score=86.46 Aligned_cols=37 Identities=46% Similarity=0.689 Sum_probs=35.8
Q ss_pred cChhHHHHHhhcCCCccccccCCCCCccchhhHHHhh
Q 011684 188 ATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAA 224 (479)
Q Consensus 188 asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~ 224 (479)
+||+||+||+|+|||++.|.|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHH
T ss_pred CChHHHHHHHHhCCChhhcCCCCCCCceeHHHHHHHh
Confidence 6999999999999999999999999999999999986
No 39
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.16 E-value=6e-11 Score=137.87 Aligned_cols=60 Identities=22% Similarity=0.429 Sum_probs=59.5
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEE
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGIL 132 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i 132 (479)
|+|++|+|++||+|++||+||+||+|||+++|+||.+|+|.+|++++|+.|.+|++|+.|
T Consensus 1176 G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1176 GRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp EEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred EEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999987
No 40
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.16 E-value=6.8e-11 Score=136.91 Aligned_cols=63 Identities=16% Similarity=0.401 Sum_probs=60.4
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
|+|++|+|++||.|++||+||+||+|||+++|+||.+|+|.++++++|+.|..|++|+.|+..
T Consensus 1086 G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1086 GSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp EEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred EEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999643
No 41
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.13 E-value=2.4e-11 Score=88.19 Aligned_cols=41 Identities=34% Similarity=0.565 Sum_probs=38.8
Q ss_pred ccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhc
Q 011684 185 KTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAG 225 (479)
Q Consensus 185 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~ 225 (479)
++.+||++|+||+|+||||..|.|||++|||+++||++|+.
T Consensus 6 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 6 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred cccCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHHh
Confidence 56789999999999999999999999999999999999975
No 42
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.12 E-value=6.2e-12 Score=138.59 Aligned_cols=64 Identities=27% Similarity=0.426 Sum_probs=0.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
.|+|++|+|++||.|++||+||+||+|||+++|+||.+|+|.++++++|+.|.+|++|++|+++
T Consensus 610 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 610 NGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 4999999999999999999999999999999999999999999999999999999999999643
No 43
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.12 E-value=2.6e-11 Score=88.73 Aligned_cols=42 Identities=38% Similarity=0.620 Sum_probs=38.8
Q ss_pred CccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhc
Q 011684 184 RKTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAG 225 (479)
Q Consensus 184 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~ 225 (479)
.++.+||.+|+||+|+||||..|.|||++|||+++||++|+.
T Consensus 8 ~~~~asP~aR~lA~e~gidl~~V~gtG~~GrI~k~DV~~~~~ 49 (51)
T 1bal_A 8 NNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLA 49 (51)
T ss_dssp SSCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTSC
T ss_pred CCCCCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHhc
Confidence 356889999999999999999999999999999999998754
No 44
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.03 E-value=8.2e-11 Score=89.94 Aligned_cols=43 Identities=30% Similarity=0.448 Sum_probs=39.8
Q ss_pred CccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhcc
Q 011684 184 RKTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAGI 226 (479)
Q Consensus 184 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~ 226 (479)
.++.+||+||+||+|+||||..|.|||++|||+++||++|+..
T Consensus 8 ~~~~asPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 8 LRFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHHHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 3567899999999999999999999999999999999999754
No 45
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=99.01 E-value=2.7e-10 Score=88.65 Aligned_cols=43 Identities=37% Similarity=0.570 Sum_probs=39.9
Q ss_pred CccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhcc
Q 011684 184 RKTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAGI 226 (479)
Q Consensus 184 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~ 226 (479)
.++++||+||+||+|+||||..|.|||++|||+++||++|+..
T Consensus 14 ~~~~aSPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 56 (70)
T 2coo_A 14 RKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 56 (70)
T ss_dssp CSCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHH
T ss_pred CccccCcHHHHHHHHhCCCccccCCCCCCCceeHHHHHHHHhc
Confidence 3567999999999999999999999999999999999999764
No 46
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.00 E-value=1.6e-10 Score=87.87 Aligned_cols=42 Identities=43% Similarity=0.588 Sum_probs=39.4
Q ss_pred ccccChhHHHHHhhcCCCccccccCCCCCccchhhHHHhhcc
Q 011684 185 KTVATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKAAGI 226 (479)
Q Consensus 185 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~ 226 (479)
++.+||++|+||+++||||..|.|||++|||+++||++|+..
T Consensus 4 ~~~asPaaRklA~e~gidl~~V~gtG~~GrItk~DV~~~~~~ 45 (62)
T 1w4i_A 4 EVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEE 45 (62)
T ss_dssp SSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHH
T ss_pred cccCChHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 467899999999999999999999999999999999999864
No 47
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.90 E-value=2.3e-09 Score=94.26 Aligned_cols=71 Identities=24% Similarity=0.193 Sum_probs=60.1
Q ss_pred EEecCCCCCCCceEEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEE---ecCCCCeec---CCC-eEEE
Q 011684 60 EIFMPALSSTMTEGKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAI---VVPEGESAP---VGA-AIGI 131 (479)
Q Consensus 60 ~i~~P~l~~~~~eg~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i---~~~~g~~v~---~G~-~l~~ 131 (479)
.+..|.+|. |+.+.+ ++||.|++||+||+||+||+..+|.||.+|+|.++ +++.|+.|. .|+ .|+.
T Consensus 38 ~~a~~~lG~------i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~ 111 (136)
T 1zko_A 38 NHAQEQLGD------VVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFK 111 (136)
T ss_dssp HHHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEE
T ss_pred hhhcccCCC------cEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEE
Confidence 344565553 445544 99999999999999999999999999999999999 888999998 898 9999
Q ss_pred EecCh
Q 011684 132 LAETE 136 (479)
Q Consensus 132 i~~~~ 136 (479)
|...+
T Consensus 112 i~~~~ 116 (136)
T 1zko_A 112 MEISD 116 (136)
T ss_dssp EEESC
T ss_pred EEECC
Confidence 97544
No 48
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.88 E-value=2e-09 Score=92.04 Aligned_cols=66 Identities=21% Similarity=0.441 Sum_probs=60.6
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEeccee-----------------------------eEEEcCCCeEEEEEecCCCCe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKAD-----------------------------MDVETFYDGILAAIVVPEGES 122 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~-----------------------------~~v~ap~~G~v~~i~~~~g~~ 122 (479)
.|+|.+|+|++||.|++||+|++|++.++. ..|+||++|+|.++.+++|+.
T Consensus 9 ~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~ 88 (116)
T 2k32_A 9 SGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGDY 88 (116)
T ss_dssp CEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTCE
T ss_pred CEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCCE
Confidence 499999999999999999999999988655 489999999999999999999
Q ss_pred ecCC-CeEEEEecChh
Q 011684 123 APVG-AAIGILAETEA 137 (479)
Q Consensus 123 v~~G-~~l~~i~~~~~ 137 (479)
|..| ++|+.|.+.+.
T Consensus 89 v~~g~~~l~~i~~~~~ 104 (116)
T 2k32_A 89 VSASTTELVRVTNLNP 104 (116)
T ss_dssp ECTTTSCCEEEECSCT
T ss_pred EcCCCcEEEEEECCCe
Confidence 9999 99999987654
No 49
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.86 E-value=6.3e-10 Score=122.46 Aligned_cols=61 Identities=18% Similarity=0.247 Sum_probs=59.4
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEE
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGIL 132 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i 132 (479)
.|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|+.|
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i 717 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEI 717 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECB
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEe
Confidence 3999999999999999999999999999999999999999999999999999999999876
No 50
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.81 E-value=2.4e-09 Score=124.21 Aligned_cols=61 Identities=21% Similarity=0.397 Sum_probs=53.4
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 1104 G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1104 GVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp EEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred eEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999875
No 51
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.48 E-value=2.1e-07 Score=80.93 Aligned_cols=72 Identities=29% Similarity=0.297 Sum_probs=56.6
Q ss_pred EEEecCCCCCCCceEEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecC---CCCee---cCCC-eEE
Q 011684 59 REIFMPALSSTMTEGKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVP---EGESA---PVGA-AIG 130 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~---~g~~v---~~G~-~l~ 130 (479)
+++..|.+|+ |+.+.+ ++||+|++||.||+||+||+..+|.||.+|+|.+++.+ ..+.| +.|+ -|+
T Consensus 28 t~~a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~ 101 (128)
T 1onl_A 28 TDYAQDALGD------VVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIF 101 (128)
T ss_dssp CHHHHHHHCS------EEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCE
T ss_pred ehHHhhcCCC------ceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEE
Confidence 3344555553 555544 99999999999999999999999999999999999754 45666 6777 888
Q ss_pred EEecCh
Q 011684 131 ILAETE 136 (479)
Q Consensus 131 ~i~~~~ 136 (479)
.|...+
T Consensus 102 ~i~~~~ 107 (128)
T 1onl_A 102 RLKPRD 107 (128)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 887543
No 52
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.45 E-value=3.4e-07 Score=79.68 Aligned_cols=72 Identities=22% Similarity=0.135 Sum_probs=56.3
Q ss_pred EEEecCCCCCCCceEEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCC---CCeec---CCC-eEE
Q 011684 59 REIFMPALSSTMTEGKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPE---GESAP---VGA-AIG 130 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~---g~~v~---~G~-~l~ 130 (479)
+++..|.+|. |+.+.+ ++||+|++||.||+||+||+..+|.||.+|+|.+++.+. .+.|. .|+ -|+
T Consensus 29 td~a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~ 102 (128)
T 3a7l_A 29 TEHAQELLGD------MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIF 102 (128)
T ss_dssp CHHHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCE
T ss_pred ehHHhccCCc------eEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEE
Confidence 3444555553 555544 999999999999999999999999999999999998654 45565 676 888
Q ss_pred EEecCh
Q 011684 131 ILAETE 136 (479)
Q Consensus 131 ~i~~~~ 136 (479)
.|...+
T Consensus 103 ~i~~~~ 108 (128)
T 3a7l_A 103 KIKASD 108 (128)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 887544
No 53
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.44 E-value=1.1e-07 Score=83.09 Aligned_cols=72 Identities=21% Similarity=0.129 Sum_probs=56.3
Q ss_pred EEEecCCCCCCCceEEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCC---Cee---cCCC-eEE
Q 011684 59 REIFMPALSSTMTEGKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEG---ESA---PVGA-AIG 130 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g---~~v---~~G~-~l~ 130 (479)
+++.+|.+| .|+.+.+ ++||+|++||+||+||+||+..+|.||.+|+|.+++.+.+ +.| +.|+ -|+
T Consensus 28 td~a~~~lG------~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~ 101 (131)
T 1hpc_A 28 TDHAQDHLG------EVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMI 101 (131)
T ss_dssp CHHHHHHHC------SEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCE
T ss_pred ehhhcccCC------CceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEE
Confidence 334455555 3666666 9999999999999999999999999999999999986554 456 3566 788
Q ss_pred EEecCh
Q 011684 131 ILAETE 136 (479)
Q Consensus 131 ~i~~~~ 136 (479)
.|...+
T Consensus 102 ~i~~~~ 107 (131)
T 1hpc_A 102 KIKPTS 107 (131)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 887543
No 54
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=98.01 E-value=9.5e-06 Score=84.15 Aligned_cols=65 Identities=15% Similarity=0.269 Sum_probs=57.9
Q ss_pred eEEEEEEEc-CCCCeecCCCeEEEEEec------------------------------------------------ceee
Q 011684 72 EGKIVSWIK-SEGDVLSKGESVVVVESD------------------------------------------------KADM 102 (479)
Q Consensus 72 eg~i~~w~v-~~Gd~V~~g~~l~~vet~------------------------------------------------K~~~ 102 (479)
.|+|.+++| ++||.|++||+|++|++. ....
T Consensus 129 ~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~~ 208 (413)
T 3ne5_B 129 AGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRF 208 (413)
T ss_dssp CEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCEE
T ss_pred CEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhccccccE
Confidence 399999998 999999999999999942 1256
Q ss_pred EEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 103 DVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 103 ~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
.|+||++|+|.++.+++|+.|..|++|+.|.+.+
T Consensus 209 ~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~~~ 242 (413)
T 3ne5_B 209 TLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMD 242 (413)
T ss_dssp EEECSSSEEEEECCCCTTCEECTTSCSEEEEEEE
T ss_pred EEEcCCCeEEEEEEcCCCCEECCCCcEEEEeCCC
Confidence 8999999999999999999999999999997543
No 55
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.99 E-value=4.3e-06 Score=81.58 Aligned_cols=64 Identities=22% Similarity=0.288 Sum_probs=56.8
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecc-----------------------------------------------------
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDK----------------------------------------------------- 99 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K----------------------------------------------------- 99 (479)
|+|.+|+|++||.|++||+|+++++..
T Consensus 31 G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~~a 110 (277)
T 2f1m_A 31 GIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQA 110 (277)
T ss_dssp EEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999998631
Q ss_pred ------------------eeeEEEcCCCeEEEEEecCCCCeecCC--CeEEEEecCh
Q 011684 100 ------------------ADMDVETFYDGILAAIVVPEGESAPVG--AAIGILAETE 136 (479)
Q Consensus 100 ------------------~~~~v~ap~~G~v~~i~~~~g~~v~~G--~~l~~i~~~~ 136 (479)
....|+||++|+|..+.+++|+.|..| ++|+.|.+.+
T Consensus 111 ~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~~ 167 (277)
T 2f1m_A 111 NAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLD 167 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecCC
Confidence 135899999999999999999999999 6999997643
No 56
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.98 E-value=8.9e-06 Score=82.30 Aligned_cols=64 Identities=22% Similarity=0.297 Sum_probs=57.9
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecce----------------------------------------------------
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDKA---------------------------------------------------- 100 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K~---------------------------------------------------- 100 (479)
|+|.+++|++||.|++||+|++++....
T Consensus 66 G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~l 145 (359)
T 3lnn_A 66 GRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASES 145 (359)
T ss_dssp EEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997531
Q ss_pred ------------------------eeEEEcCCCeEEEEEecCCCCeecC-CCeEEEEecCh
Q 011684 101 ------------------------DMDVETFYDGILAAIVVPEGESAPV-GAAIGILAETE 136 (479)
Q Consensus 101 ------------------------~~~v~ap~~G~v~~i~~~~g~~v~~-G~~l~~i~~~~ 136 (479)
...|+||++|+|.++.+++|+.|.. |++|+.|.+.+
T Consensus 146 ~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~~ 206 (359)
T 3lnn_A 146 QRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADLS 206 (359)
T ss_dssp HHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECCS
T ss_pred HHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecCC
Confidence 2579999999999999999999998 99999997644
No 57
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.92 E-value=1e-05 Score=81.28 Aligned_cols=64 Identities=17% Similarity=0.261 Sum_probs=56.5
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecc-----------------------------------------------------
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDK----------------------------------------------------- 99 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K----------------------------------------------------- 99 (479)
|+|.+|+|++||.|++||+|++++...
T Consensus 40 G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a 119 (341)
T 3fpp_A 40 GQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA 119 (341)
T ss_dssp EEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHH
T ss_pred cEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHH
Confidence 999999999999999999999998641
Q ss_pred --------------------------------eeeEEEcCCCeEEEEEecCCCCeecCCCe---EEEEecCh
Q 011684 100 --------------------------------ADMDVETFYDGILAAIVVPEGESAPVGAA---IGILAETE 136 (479)
Q Consensus 100 --------------------------------~~~~v~ap~~G~v~~i~~~~g~~v~~G~~---l~~i~~~~ 136 (479)
....|+||++|+|.++.+.+|+.|..|++ |+.|.+..
T Consensus 120 ~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~~ 191 (341)
T 3fpp_A 120 ATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMS 191 (341)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEecCC
Confidence 11569999999999999999999999987 88887643
No 58
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.90 E-value=1.7e-05 Score=68.46 Aligned_cols=62 Identities=21% Similarity=0.105 Sum_probs=47.8
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCC---ee---cCCC-eEEEEec
Q 011684 73 GKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGE---SA---PVGA-AIGILAE 134 (479)
Q Consensus 73 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~---~v---~~G~-~l~~i~~ 134 (479)
|.|+-+.. ++|++|++||.++.||++|+..+|.||.+|+|.++..+..+ .+ +-|+ =|+.|..
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~~P~liN~dpy~~gWl~ki~~ 101 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAENPGLVNKSCYEDGWLIKMTF 101 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTTCTTHHHHCTTTTTCCEEEEE
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhhChHhhcCCCCCCceEEEEEE
Confidence 45555555 79999999999999999999999999999999999755433 23 3444 3666653
No 59
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.74 E-value=4e-05 Score=67.41 Aligned_cols=63 Identities=32% Similarity=0.281 Sum_probs=48.1
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCe---e---cCCC-eEEEEecC
Q 011684 73 GKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGES---A---PVGA-AIGILAET 135 (479)
Q Consensus 73 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~---v---~~G~-~l~~i~~~ 135 (479)
|.|+-+.. ++|++|++||.++.||++|+..+|.||.+|+|.++.-+..+. | +.|+ =|+.|...
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L~d~PeliN~dPy~~GWl~ki~~~ 124 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAESPELVNQKAETEGWLWKMTVQ 124 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHSTTTTTCCEEEECS
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhhhhChHhhhCCCCCCCeEEEEEEC
Confidence 44555444 899999999999999999999999999999999997554432 2 3443 56666543
No 60
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.70 E-value=3.9e-05 Score=67.12 Aligned_cols=44 Identities=30% Similarity=0.293 Sum_probs=38.3
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEe
Q 011684 73 GKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIV 116 (479)
Q Consensus 73 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~ 116 (479)
|.|+-+.. ++|++|++||.++.||++|+..+|.||.+|+|.++.
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN 93 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVN 93 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEeh
Confidence 34444433 899999999999999999999999999999999885
No 61
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.70 E-value=2.3e-05 Score=79.93 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=56.0
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEecc-----------------------------------------------------
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVESDK----------------------------------------------------- 99 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet~K----------------------------------------------------- 99 (479)
|+|.+++|++||.|++||+|++|+...
T Consensus 52 G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~~a 131 (369)
T 1vf7_A 52 GIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQA 131 (369)
T ss_dssp EEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997532
Q ss_pred ----eeeEEEcCCCeEEEEEecCCCCeecCC--CeEEEEecC
Q 011684 100 ----ADMDVETFYDGILAAIVVPEGESAPVG--AAIGILAET 135 (479)
Q Consensus 100 ----~~~~v~ap~~G~v~~i~~~~g~~v~~G--~~l~~i~~~ 135 (479)
....|+||++|+|.++.+++|+.|..| ++|+.|.+.
T Consensus 132 ~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~~ 173 (369)
T 1vf7_A 132 RINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQL 173 (369)
T ss_dssp HHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEECC
T ss_pred HHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEecC
Confidence 135899999999999999999999995 899998754
No 62
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.43 E-value=0.00019 Score=63.76 Aligned_cols=44 Identities=25% Similarity=0.264 Sum_probs=38.1
Q ss_pred EEEEEEEc-CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEe
Q 011684 73 GKIVSWIK-SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIV 116 (479)
Q Consensus 73 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~ 116 (479)
|.|+-+.. ++|+.|++||.++.||+.|+..+|.||.+|+|.++.
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN 103 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN 103 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEh
Confidence 34444433 799999999999999999999999999999999886
No 63
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.18 E-value=1.6e-05 Score=80.55 Aligned_cols=63 Identities=22% Similarity=0.336 Sum_probs=54.3
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecc----------------------------------------------------
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDK---------------------------------------------------- 99 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K---------------------------------------------------- 99 (479)
.|+|.+++|++||.|++||+|++++...
T Consensus 40 ~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~ 119 (369)
T 4dk0_A 40 SGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNT 119 (369)
T ss_dssp CSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHHH
T ss_pred CcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHH
Confidence 3899999999999999999999998642
Q ss_pred ---------------------------------eeeEEEcCCCeEEEEEecCCCCeecCCCe---EEEEec
Q 011684 100 ---------------------------------ADMDVETFYDGILAAIVVPEGESAPVGAA---IGILAE 134 (479)
Q Consensus 100 ---------------------------------~~~~v~ap~~G~v~~i~~~~g~~v~~G~~---l~~i~~ 134 (479)
....|+||++|+|.++.+++|+.|..|++ |+.|.+
T Consensus 120 a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~ 190 (369)
T 4dk0_A 120 AKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVAD 190 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEcC
Confidence 01359999999999999999999999998 666644
No 64
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.73 E-value=0.003 Score=63.39 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=50.4
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe----cceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 75 IVSWIKSEGDVLSKGESVVVVES----DKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 75 i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
+++.+++.||.|++||+|++|.. .....+|+||.+|+|... ...-.|..|+.|+.|...
T Consensus 267 l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~--~~~~~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 267 LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISR--HFPGMIKSGDCAAVIGVV 329 (331)
T ss_dssp EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEE--ECSSEECTTCEEEEEECB
T ss_pred EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEE--eCCCccCCCCEEEEEecc
Confidence 77779999999999999999997 356789999999999654 445788999999999653
No 65
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.0007 Score=55.84 Aligned_cols=47 Identities=15% Similarity=0.216 Sum_probs=42.7
Q ss_pred CCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 89 GESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 89 g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
|..+|.+|.++....|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~ 51 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 51 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEET
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEec
Confidence 45668888899899999999999999999999999999999999753
No 66
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.57 E-value=0.0054 Score=62.06 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=52.7
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEe----cceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVES----DKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
| +++..++.||.|++||+|+.|+. .+...+|.||.+|+|... ..+..|..|+.|+.|...
T Consensus 276 G-~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia~~ 339 (354)
T 3cdx_A 276 G-LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVMED 339 (354)
T ss_dssp E-EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEEEE
T ss_pred E-EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEeee
Confidence 5 78888999999999999999997 488899999999999655 578899999999998654
No 67
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.52 E-value=0.0056 Score=62.35 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=50.6
Q ss_pred EEEEEEcCCCCeecCCCeEEEEEe------cceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 74 KIVSWIKSEGDVLSKGESVVVVES------DKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 74 ~i~~w~v~~Gd~V~~g~~l~~vet------~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
=|.+.+++.||.|++||+|++|.. .....+|+||.+|+|.. ....-.|..|+.|+.|..
T Consensus 299 Gl~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~--~~~~p~V~~G~~l~~i~~ 363 (368)
T 3fmc_A 299 GMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPIL--HFASASVHQGTELYKVMT 363 (368)
T ss_dssp EEEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEE--ECSSSEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEE--EeCCCccCCCCEEEEEee
Confidence 356699999999999999999997 56788999999999954 455688999999998864
No 68
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.13 E-value=0.006 Score=46.52 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.5
Q ss_pred EEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 103 DVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 103 ~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
+|.||.+|+|.++++++|+.|..|++|+.|+..
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 33 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESM 33 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECC
Confidence 378999999999999999999999999999764
No 69
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=96.04 E-value=0.0071 Score=46.79 Aligned_cols=35 Identities=20% Similarity=0.423 Sum_probs=32.2
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
...|.|+.+|+|.++++++|+.|..|++|+.|+..
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~ 42 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAM 42 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEET
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEcc
Confidence 45789999999999999999999999999999764
No 70
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=96.01 E-value=0.0089 Score=45.67 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=31.8
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 40 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMK 40 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEETT
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEeccc
Confidence 46899999999999999999999999999997543
No 71
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=95.74 E-value=0.0099 Score=53.35 Aligned_cols=65 Identities=26% Similarity=0.417 Sum_probs=55.2
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEEcCCCeEEEEE-------------------
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSK----GESVVVVESDKADMDVETFYDGILAAI------------------- 115 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~v~ap~~G~v~~i------------------- 115 (479)
..|.-| + .|+|+.+. +..|.|-. |+-++...++ ..++||.+|+|..+
T Consensus 13 ~~i~aP-~-----~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLi 82 (161)
T 1f3z_A 13 IEIIAP-L-----SGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFV 82 (161)
T ss_dssp EEEECS-S-----CEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEec-C-----CeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEE
Confidence 346666 3 39999977 78898776 8999988876 58899999999988
Q ss_pred ----------------ecCCCCeecCCCeEEEEe
Q 011684 116 ----------------VVPEGESAPVGAAIGILA 133 (479)
Q Consensus 116 ----------------~~~~g~~v~~G~~l~~i~ 133 (479)
++++||.|..|++|+++.
T Consensus 83 HiGidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 83 HFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp ECSBSGGGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred EECccchhcCCCccEEEEeCcCEECCCCEEEEEC
Confidence 899999999999999984
No 72
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=95.67 E-value=0.012 Score=49.45 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=32.1
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
+.|.|+.+|+|.++++++|+.|..|++|+.|...
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5789999999999999999999999999999865
No 73
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=95.39 E-value=0.011 Score=52.77 Aligned_cols=65 Identities=17% Similarity=0.293 Sum_probs=54.4
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEEcCCCeEEEEE-------------------
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSK----GESVVVVESDKADMDVETFYDGILAAI------------------- 115 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~v~ap~~G~v~~i------------------- 115 (479)
..|.-| + .|+|+.+. ++.|.|-. |+.++...++ ..+.||.+|+|..+
T Consensus 8 ~~i~aP-~-----~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLi 77 (154)
T 2gpr_A 8 LKVLAP-C-----DGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILL 77 (154)
T ss_dssp EEEECS-S-----SEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEE
T ss_pred CEEEec-C-----CeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEE
Confidence 356666 3 39999975 88998876 8999988875 58999999999984
Q ss_pred ----------------ecCCCCeecCCCeEEEEe
Q 011684 116 ----------------VVPEGESAPVGAAIGILA 133 (479)
Q Consensus 116 ----------------~~~~g~~v~~G~~l~~i~ 133 (479)
++++||.|..|++|+++.
T Consensus 78 HiGidTv~l~G~gF~~~V~~Gd~V~~G~~L~~~d 111 (154)
T 2gpr_A 78 HIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp ECSSSGGGGTTCSEEECCCTTCEECTTCEEEEEC
T ss_pred EECcchhhcCCCceEEEEcCCCEEcCCCEEEEEC
Confidence 899999999999999984
No 74
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.29 E-value=0.012 Score=46.63 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=31.5
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
..|.||.+|+|.++++++|+.|..|++|+.|+..
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~ 39 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 39 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEECS
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEEec
Confidence 4699999999999999999999999999999754
No 75
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=95.11 E-value=0.014 Score=52.50 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=50.5
Q ss_pred eEEEEEEEcCCCCeecC----CCeEEEEEecceeeEEEcCCCeEEEEE--------------------------------
Q 011684 72 EGKIVSWIKSEGDVLSK----GESVVVVESDKADMDVETFYDGILAAI-------------------------------- 115 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~v~ap~~G~v~~i-------------------------------- 115 (479)
.|+|+.+ .+..|.|-. |+.++...+ ...++||.+|+|..+
T Consensus 20 ~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~g 95 (162)
T 1ax3_A 20 TGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGEG 95 (162)
T ss_dssp SEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTTT
T ss_pred ceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCCc
Confidence 3999997 678888776 899998776 458899999999988
Q ss_pred ---ecCCCCeecCCCeEEEEe
Q 011684 116 ---VVPEGESAPVGAAIGILA 133 (479)
Q Consensus 116 ---~~~~g~~v~~G~~l~~i~ 133 (479)
++++||.|..|++|+.+.
T Consensus 96 F~~~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 96 FTSFVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp EEESCCCCSEECSEEEEEEEC
T ss_pred cEEEEeCCCEEcCCCEEEEEC
Confidence 889999999999999984
No 76
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=94.99 E-value=0.043 Score=54.82 Aligned_cols=60 Identities=22% Similarity=0.181 Sum_probs=49.0
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEe----cceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVES----DKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
+-+....++.||.|++||+|++|-. .+...+|.||.+|+|.-. ...-.|..|+.|+.|..
T Consensus 265 ~G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~--~~~p~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 265 PGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAI--RSAMYVQGNEEVAILAR 328 (332)
T ss_dssp SEEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEE--ECSEEECTTCEEEEEEE
T ss_pred CeEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEE--eCCCeeCCCCEEEEEee
Confidence 3355678899999999999999965 567789999999999544 46678899999998854
No 77
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=94.65 E-value=0.047 Score=52.61 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=40.5
Q ss_pred CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 81 SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 81 ~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 57 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPAT 57 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCHH
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcHH
Confidence 334444444455677765 4678999999999999999999999999999997654
No 78
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=94.32 E-value=0.032 Score=45.66 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=32.3
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
...|.++.+|+|.++++++|+.|..|++|+.|+...
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~ 49 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMK 49 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSS
T ss_pred ceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccc
Confidence 456899999999999999999999999999997643
No 79
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.26 E-value=0.023 Score=46.03 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=31.6
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
...|.||.+|+|.++++++|+.|..|++|+.|+...
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k 60 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMK 60 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC--
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEeccc
Confidence 456899999999999999999999999999997643
No 80
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=94.21 E-value=0.039 Score=42.95 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=31.6
Q ss_pred eEEEcCCCeEEEEE-------ecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAI-------VVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i-------~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||..|+|.++ ++++|+.|..|++|+.|+...
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k 46 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMK 46 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETT
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEecc
Confidence 46899999999998 899999999999999997643
No 81
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=93.64 E-value=0.065 Score=49.20 Aligned_cols=40 Identities=10% Similarity=0.240 Sum_probs=30.7
Q ss_pred EEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEE
Q 011684 59 REIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILA 113 (479)
Q Consensus 59 ~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~ 113 (479)
....+| .|. .++|++||.|++||.||+-. .|-+..+|+|.
T Consensus 13 er~~Ip-yGA--------~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~ 52 (193)
T 2xha_A 13 ERLILS-PKA--------KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIV 52 (193)
T ss_dssp EEEEEC-TTC--------EESCCTTCEECTTCEEEEEC------CEECSSCEEEE
T ss_pred EEEECC-CCC--------EEEECCCCEEcCCCEEEEeC------cEEEccCEEEE
Confidence 446677 554 78999999999999999743 66677777764
No 82
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=93.54 E-value=0.052 Score=54.34 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=45.0
Q ss_pred CCCCeecCCCeEEEEEec-ceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 81 SEGDVLSKGESVVVVESD-KADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 81 ~~Gd~V~~g~~l~~vet~-K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+.|+.-..-..-+.|+.+ .-...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 36 ~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 92 (359)
T 3lnn_A 36 TRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD 92 (359)
T ss_dssp EEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSS
T ss_pred eecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHH
Confidence 334433444556677775 67889999999999999999999999999999998754
No 83
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=93.50 E-value=0.074 Score=47.37 Aligned_cols=45 Identities=29% Similarity=0.266 Sum_probs=40.4
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecceeeE-EEcCCCeEEEEEe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKADMD-VETFYDGILAAIV 116 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~-v~ap~~G~v~~i~ 116 (479)
||.-+-..+.+||.|.+||.|+-|.|.|-++- ++||.+|+|.-+.
T Consensus 108 eG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~ 153 (169)
T 3d4r_A 108 EGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN 153 (169)
T ss_dssp CSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred CceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEE
Confidence 56677788999999999999999999999887 9999999997664
No 84
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=93.32 E-value=0.073 Score=52.81 Aligned_cols=57 Identities=18% Similarity=0.264 Sum_probs=43.6
Q ss_pred EcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 79 IKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 79 ~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
.++.|+.-..=..-..|+.. -...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 10 ~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~ 66 (341)
T 3fpp_A 10 IVRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQ 66 (341)
T ss_dssp ---CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCHH
T ss_pred EEEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHH
Confidence 34555554444555677765 4678999999999999999999999999999997654
No 85
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=93.00 E-value=0.048 Score=42.07 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=27.4
Q ss_pred cCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 106 TFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 106 ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
++.+|+|.++++++|+.|..|++|+.++..
T Consensus 12 ~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~ 41 (77)
T 2l5t_A 12 GVTEGEIVRWDVKEGDMVEKDQDLVEVMTD 41 (77)
T ss_dssp SCCCEEEEECSCCTTCEECSCCCCCEEESS
T ss_pred CCccEEEEEEEeCCCCEECCCCEEEEEEcc
Confidence 467999999999999999999999999764
No 86
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=92.84 E-value=0.12 Score=40.06 Aligned_cols=28 Identities=7% Similarity=0.176 Sum_probs=25.9
Q ss_pred CeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 109 DGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 109 ~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+|+|.++++++|+.|..|++|+.++...
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~ 41 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDK 41 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCC
Confidence 8999999999999999999999997643
No 87
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=92.43 E-value=0.15 Score=41.09 Aligned_cols=29 Identities=14% Similarity=0.113 Sum_probs=26.3
Q ss_pred CCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 108 YDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 108 ~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|+|.++++++||.|..|++|+.|+...
T Consensus 17 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K 45 (93)
T 1k8m_A 17 REVTVKEWYVKEGDTVSQFDSICEVQSDK 45 (93)
T ss_dssp CCEEEEEECCCTTCEECSSSCCEEEECSS
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEcCC
Confidence 58999999999999999999999997543
No 88
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.17 E-value=0.14 Score=41.81 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=26.3
Q ss_pred CCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 108 YDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 108 ~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|+|.++++++||.|..|++|+.|+...
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K 48 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDK 48 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEccc
Confidence 47999999999999999999999998644
No 89
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=91.98 E-value=0.31 Score=44.76 Aligned_cols=45 Identities=24% Similarity=0.321 Sum_probs=40.0
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCee
Q 011684 77 SWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESA 123 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v 123 (479)
.++|++||.|++||.||+. |..+..|-+..+|+|.--.+.+|.++
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~ 107 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTI 107 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTE
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcce
Confidence 7899999999999999976 89999999999999987777777554
No 90
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=91.86 E-value=0.086 Score=40.89 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=27.3
Q ss_pred cCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 106 TFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 106 ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
++.+|+|.++++++||.|..|++|+.++...
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDK 42 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSS
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccc
Confidence 3468999999999999999999999997543
No 91
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=91.84 E-value=0.15 Score=40.34 Aligned_cols=29 Identities=14% Similarity=0.125 Sum_probs=26.4
Q ss_pred CCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 108 YDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 108 ~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|+|.++++++||.|..|++|+.|+...
T Consensus 18 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 46 (87)
T 3crk_C 18 TMGTVQRWEKKVGEKLSEGDLLAEIETDX 46 (87)
T ss_dssp CEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred CcEEEEEEEcCCCCEEcCCCEEEEEECCc
Confidence 58999999999999999999999997643
No 92
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=91.75 E-value=0.13 Score=39.89 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=28.4
Q ss_pred EcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 105 ETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 105 ~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
-++..|+|.++++++|+.|..|++|+.++...
T Consensus 11 g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (81)
T 1gjx_A 11 GGHENVDIIAVEVNVGDTIAVDDTLITLETDK 42 (81)
T ss_dssp SSCSSEEEEEECCCSSCBCCSSCCCEEEECSS
T ss_pred CCCCcEEEEEEEcCCCCEECCCCEEEEEEeCC
Confidence 35689999999999999999999999997643
No 93
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=91.75 E-value=0.17 Score=42.05 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=26.3
Q ss_pred CCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 108 YDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 108 ~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|+|.++++++||.|..|++|++|+...
T Consensus 20 ~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K 48 (108)
T 2dne_A 20 QAGTIARWEKKEGDKINEGDLIAEVETDK 48 (108)
T ss_dssp CEEEEEECSSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEEEcCc
Confidence 47999999999999999999999998643
No 94
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=91.64 E-value=0.16 Score=51.17 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=39.8
Q ss_pred CCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 81 SEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 81 ~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 24 ~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~ 78 (369)
T 1vf7_A 24 EAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPAT 78 (369)
T ss_dssp -----CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHH
T ss_pred EeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHH
Confidence 333333333344566654 4578999999999999999999999999999997654
No 95
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=91.46 E-value=0.19 Score=51.64 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=41.1
Q ss_pred CCeecCCCeEEEEEec-ceeeEEEcCCCeEEEEEec-CCCCeecCCCeEEEEecCh
Q 011684 83 GDVLSKGESVVVVESD-KADMDVETFYDGILAAIVV-PEGESAPVGAAIGILAETE 136 (479)
Q Consensus 83 Gd~V~~g~~l~~vet~-K~~~~v~ap~~G~v~~i~~-~~g~~v~~G~~l~~i~~~~ 136 (479)
|+.-..=.....|+.+ .-...|.++.+|+|.++++ ++||.|..|++|+.|...+
T Consensus 102 ~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~ 157 (413)
T 3ne5_B 102 GPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPD 157 (413)
T ss_dssp ECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCS
T ss_pred eecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHH
Confidence 3333333344556543 4568899999999999998 9999999999999998543
No 96
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=91.45 E-value=0.012 Score=46.61 Aligned_cols=35 Identities=9% Similarity=0.070 Sum_probs=31.0
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
++|.+|.-|+|.++++++|+.|..|++|+.|+...
T Consensus 3 ~~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k 37 (85)
T 2k7v_A 3 KEVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDK 37 (85)
T ss_dssp SCCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCC
T ss_pred cEEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccc
Confidence 56788888999999999999999999999997543
No 97
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=90.62 E-value=0.24 Score=49.89 Aligned_cols=48 Identities=13% Similarity=0.247 Sum_probs=35.7
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEE---------------------------e--cCCCCeecCCC
Q 011684 77 SWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAI---------------------------V--VPEGESAPVGA 127 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i---------------------------~--~~~g~~v~~G~ 127 (479)
.++|++||.|++||.||+-. .|-+..+|+|... . +++|+.|..|+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 88999999999999999843 5555566655322 2 66777777777
Q ss_pred eEE
Q 011684 128 AIG 130 (479)
Q Consensus 128 ~l~ 130 (479)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 777
No 98
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=90.42 E-value=0.35 Score=41.50 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=26.3
Q ss_pred CCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 108 YDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 108 ~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
.+|+|.++++++||.|..|++|++|+...
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K 68 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDK 68 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCc
Confidence 57999999999999999999999998644
No 99
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=90.38 E-value=4.2 Score=41.74 Aligned_cols=28 Identities=11% Similarity=0.064 Sum_probs=25.0
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 445 LVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 445 ~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
-|-+++||-++||+-...|+++|.+..+
T Consensus 135 ~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~ 162 (493)
T 4hvm_A 135 VLGVVAHQMLLDARSRYMVLGAVWQAYY 162 (493)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEecchhhccHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999998763
No 100
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=89.57 E-value=0.13 Score=47.10 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=35.8
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEE--------------------------E--ecCCCCeecCCCeEEE
Q 011684 80 KSEGDVLSKGESVVVVESDKADMDVETFYDGILAA--------------------------I--VVPEGESAPVGAAIGI 131 (479)
Q Consensus 80 v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~--------------------------i--~~~~g~~v~~G~~l~~ 131 (479)
|++|++|+.||+|+ -...|-|..+|+|.- + +|++||.|..|++|+.
T Consensus 85 V~dG~~V~~GdvLA------Kd~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~D 158 (193)
T 2xha_A 85 LRVGTKVKQGLPLS------KNEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 158 (193)
T ss_dssp CCTTCEECTTSBSS------TTSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEcCCCEEe------cCCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCccc
Confidence 89999999999998 234455666666641 3 7899999999999874
No 101
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=88.21 E-value=0.11 Score=52.12 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=44.1
Q ss_pred cCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 80 KSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 80 v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
++.|+.-..=..-..|+.. -...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 12 v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~ 67 (369)
T 4dk0_A 12 VKRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTT 67 (369)
T ss_dssp CCEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHH
T ss_pred EEecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHH
Confidence 4445554455556677744 4668999999999999999999999999999997654
No 102
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=87.13 E-value=1 Score=40.91 Aligned_cols=67 Identities=24% Similarity=0.390 Sum_probs=51.2
Q ss_pred eEEEecCCCCCCCceEEEEEEEcCCCCee----cCCCeEEEEEecceeeEEEcCCCeEEEEE------------------
Q 011684 58 IREIFMPALSSTMTEGKIVSWIKSEGDVL----SKGESVVVVESDKADMDVETFYDGILAAI------------------ 115 (479)
Q Consensus 58 ~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V----~~g~~l~~vet~K~~~~v~ap~~G~v~~i------------------ 115 (479)
...|.-| +. |+++.+. ++-|.| --||-+++.=++. .|.||++|+|..+
T Consensus 34 ~~~i~aP-v~-----G~vi~L~-eV~D~vFs~~~mGdG~AI~P~~g---~v~AP~dG~V~~vfpT~HAigi~s~~G~EvL 103 (183)
T 3our_B 34 AIEIIAP-LS-----GEIVNIE-DVPDVVFAEKIVGDGIAIKPTGN---KMVAPVNGTIGKIFETNHAFSIESDDGVELF 103 (183)
T ss_dssp CEEEECS-SC-----EEEEEGG-GSSCHHHHTTSSCEEEEEEECSS---EEECSSSEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceEEEee-cc-----eEEEEch-hCcChHhcccCccCeEEEEcCCC---EEEeCCCeEEEEECCCCCEEEEEeCCCCEEE
Confidence 3456667 33 8888654 666765 2488888766543 7999999999887
Q ss_pred -----------------ecCCCCeecCCCeEEEEec
Q 011684 116 -----------------VVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 116 -----------------~~~~g~~v~~G~~l~~i~~ 134 (479)
+|++||.|..|++|+.+.-
T Consensus 104 IHIGiDTV~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD~ 139 (183)
T 3our_B 104 VHFGIDTVELKGEGFTRIAEEGQTVKAGDTVIEFDL 139 (183)
T ss_dssp EECSBSGGGGTTTTEEECSCTTCEECTTCEEEEECH
T ss_pred EEecccccccCCccceEEEeCcCEEcCCCEEEEECH
Confidence 7899999999999999853
No 103
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=86.91 E-value=0.38 Score=37.09 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=29.0
Q ss_pred eEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEEec
Q 011684 58 IREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVESD 98 (479)
Q Consensus 58 ~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~ 98 (479)
..+|.-| ..|+|.++++++||.|..|++|+.|+..
T Consensus 41 ~~~i~Ap------~~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 41 SMEVPSP------KAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp EEEEECS------SSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred EEEEECC------CCEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 4566666 2489999999999999999999999753
No 104
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=86.27 E-value=0.12 Score=40.27 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=26.1
Q ss_pred CCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 107 FYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 107 p~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
...|+|.++++++||.|..|++|+.++..
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~ 42 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETD 42 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSS
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEcc
Confidence 36899999999999999999999999653
No 105
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=86.10 E-value=3.7 Score=43.40 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=32.9
Q ss_pred EEEEEeccHHHHHHHHhCCC---CCCHHHHHHHHHHHHHhhC
Q 011684 285 VGYPIITDALDALYEKVKPK---GVTMTALLAKAAAMALVQH 323 (479)
Q Consensus 285 ~~~~iDvt~l~~~~~~~k~~---~~s~~~~likAva~Al~~~ 323 (479)
+...++.....++++.+|++ |+|+++++.-|++.|+.++
T Consensus 280 ~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~ 321 (519)
T 3fot_A 280 VIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDH 321 (519)
T ss_dssp EEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhh
Confidence 56667777777888888888 9999999999999999874
No 106
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=85.98 E-value=12 Score=37.22 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=25.6
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
.-|-+.+||-++||+-...|+++|.++..
T Consensus 118 ~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 118 HLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 34679999999999999999999998765
No 107
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=85.95 E-value=0.68 Score=50.69 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=32.7
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
...|.||..|+|.+++|++||.|..||+|++|+...
T Consensus 612 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 647 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMK 647 (681)
T ss_dssp CSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSS
T ss_pred CCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecC
Confidence 456999999999999999999999999999998644
No 108
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=81.33 E-value=1.3 Score=51.77 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=32.3
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||..|+|.++++++||.|..||+|++|+...
T Consensus 1168 ~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 1202 (1236)
T 3va7_A 1168 ELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMK 1202 (1236)
T ss_dssp EEEECSSCEEEEEESSCTTCEECSSCEEEEEEETT
T ss_pred cEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecC
Confidence 46999999999999999999999999999998654
No 109
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=81.31 E-value=1.3 Score=51.42 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=32.8
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
...|.||..|+|.+++|++||.|..|++|+.|+...
T Consensus 1077 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ieamK 1112 (1150)
T 3hbl_A 1077 PSHIGAQMPGSVTEVKVSVGETVKANQPLLITEAMK 1112 (1150)
T ss_dssp SSEEECSSSEEEEEECCCTTCEECTTCEEEEEESSS
T ss_pred CceeecCceEEEEEEEeCCCCEECCCCEEEEEEecc
Confidence 357999999999999999999999999999998654
No 110
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=80.74 E-value=47 Score=32.87 Aligned_cols=162 Identities=12% Similarity=0.106 Sum_probs=87.9
Q ss_pred EEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCcccEEEEEEeC------C--Ce-
Q 011684 284 RVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNANINIAVAVAIN------G--GL- 354 (479)
Q Consensus 284 ~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~i~i~~aV~~~------~--gl- 354 (479)
.+...++.....++++..++.|+|++.+++-|.+.+|.++-. +.+-+|+.+..- + |.
T Consensus 210 ~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~L~~~~g--------------~dv~ig~~~~~R~~~~~~~~vG~f 275 (436)
T 1l5a_A 210 SLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEP--------------DAPWLWLPFMNRWGSVAANVPGLM 275 (436)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHST--------------TCCEEEEEECCCTTSGGGGSCSCC
T ss_pred eeEEecCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhC--------------CceEEeeecccCCChHHhcCcceE
Confidence 445566655555555555566999999999999999987522 223455555421 1 32
Q ss_pred --EEeE-EecCCCCCHHHHHHHHHHHHHHHHcCC-C---------CC----CCCCCCeEEEeecCC--CCccceeecCCC
Q 011684 355 --ITPV-LQDADKLDLYLLSQKWKELVEKARSKQ-L---------QP----HEYNSGTFTLSNLGM--FGVDRFDAILPP 415 (479)
Q Consensus 355 --~~pv-i~~a~~~sl~ei~~~~~~l~~~ar~~~-l---------~~----~d~~~~tftISnlg~--~G~~~ftpii~~ 415 (479)
++|+ +......++.++.+.+++....+...+ . .. ..+..-.|.+.+... ++...+...
T Consensus 276 ~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~i~~~l~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~--- 352 (436)
T 1l5a_A 276 VNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILPFESPHFADCQTELK--- 352 (436)
T ss_dssp CEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCTTCCBCCCSEEEEECCCCCCCTTCEEEEE---
T ss_pred EEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHHHHHHhcccccCCCccceEEEeeccCccccCCCeeEEE---
Confidence 2444 333456689999998887665553322 1 11 111223344443321 111111100
Q ss_pred CCceEEEeCcce---EEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 416 GQGAIMAVGASK---PTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 416 ~~~ail~vG~~~---~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
.+.-+... -......+|. +.+.+.||-.+++...+.+|++.|..+|+
T Consensus 353 ----~~~~~~~~~l~l~v~~~~~~~------l~~~~~y~~~~~~~~~i~~l~~~~~~~l~ 402 (436)
T 1l5a_A 353 ----VLASGSAEGINFTFRGSPQHE------LCLDITADLASYPQSHWQSHCERFPRFFE 402 (436)
T ss_dssp ----EEEECCCCSEEEEEEECTTSC------EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred ----ecCCCCccceEEEEEecCCCc------EEEEEEeChhhCCHHHHHHHHHHHHHHHH
Confidence 01111111 1111112332 77889999999999999888888777664
No 111
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.48 E-value=1.1 Score=49.25 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=32.2
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||..|+|.++++++||.|..|++|++|+...
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamK 684 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMK 684 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSS
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEeccc
Confidence 56999999999999999999999999999998644
No 112
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=79.88 E-value=0.68 Score=41.00 Aligned_cols=58 Identities=12% Similarity=0.205 Sum_probs=38.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecce--------e-eEEEcCCCeEEEEEecCCCCeecCCCeEEEE
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDKA--------D-MDVETFYDGILAAIVVPEGESAPVGAAIGIL 132 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K~--------~-~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i 132 (479)
+|+=.+.+|++||+|++||+|+++..++. + +-|.- .+ +..+....+..|..|+.|+.+
T Consensus 87 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn-~~--~~~~~~~~~~~v~~g~~~~~~ 153 (154)
T 2gpr_A 87 DGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTN-NG--GKTLEIVKMGEVKQGDVVAIL 153 (154)
T ss_dssp TTCSEEECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEE-CS--SCCCSCBCCEEECTTCEEEEE
T ss_pred CCCceEEEEcCCCEEcCCCEEEEECHHHHHhcCCCCeEEEEEEC-CC--cceEEEccCceEcCCCEEEEe
Confidence 55666789999999999999999875432 1 22222 11 112333446678889888765
No 113
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=79.49 E-value=1.4 Score=51.06 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=30.1
Q ss_pred EEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEE
Q 011684 77 SWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAA 114 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~ 114 (479)
.++|++||.|++||+||+. |--+..|-+..+|+|.-
T Consensus 1002 ~l~v~~g~~V~~g~~ia~w--Dp~~~piise~~G~v~f 1037 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRF 1037 (1407)
T ss_dssp EESSCSSCEECTTCEEEEC--CSSCCCEECSSCEEEEE
T ss_pred EEEEcCCCEecCCCEEEEE--ecCceeEEeccceEEEE
Confidence 6889999999999999987 66677788888887754
No 114
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=78.12 E-value=0.54 Score=47.28 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=31.3
Q ss_pred cCCCCeecCCCeEE-------------EEEecceeeEEEcCCCeEEEE----------EecCCCCeecCCCeEEE
Q 011684 80 KSEGDVLSKGESVV-------------VVESDKADMDVETFYDGILAA----------IVVPEGESAPVGAAIGI 131 (479)
Q Consensus 80 v~~Gd~V~~g~~l~-------------~vet~K~~~~v~ap~~G~v~~----------i~~~~g~~v~~G~~l~~ 131 (479)
|++|++|+.||+|+ ..--+|-.+.|+ +.+|...+ ++|++||.|..|++|+.
T Consensus 125 v~~g~~v~~G~vlak~~aiiaeidG~V~fg~~kr~i~i~-~~~g~~~eylip~~~~k~~~v~~Gd~V~~G~~l~d 198 (352)
T 2xhc_A 125 LRVGTKVKQGLPLSKNEEYICELDGKIVEIERMKKVVVQ-TPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 198 (352)
T ss_dssp CCTTCEECTTCBSBSSSSCBCCSCEEEEEEEEEEEEEEE-CTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEccCcEEecCceEEeccceEEEECCcEEEEEEE-CCCCCEEEEEEcCCCCcCeeeCCCCEEeCCCCccc
Confidence 89999999999887 111113333344 24443222 24677888888888873
No 115
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=74.16 E-value=0.65 Score=50.84 Aligned_cols=35 Identities=17% Similarity=0.364 Sum_probs=0.0
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||..|+|.++++++||.|..|++|++|+...
T Consensus 603 ~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 637 (675)
T 3u9t_A 603 GGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMK 637 (675)
T ss_dssp -----------------------------------
T ss_pred CeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEecc
Confidence 46999999999999999999999999999997543
No 116
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=73.97 E-value=2.3 Score=42.54 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=40.5
Q ss_pred EEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 78 WIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 78 w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
-.++.|+.|++||+|+++- | -+|.+|++|.+.- .. .-.|..|+.++.+..
T Consensus 279 ~~~~~g~~V~~G~~La~i~-d---~~v~a~~dG~~i~--~p-~p~V~~G~~~~~i~~ 328 (350)
T 2bco_A 279 DNVENFTSFVHGEVFGHDG-D---KPLMAKNDNEAIV--FP-NRHVAIGQRAALMVC 328 (350)
T ss_dssp TTCCBTEECCTTCEEEEET-T---EEEECSSSSCEEE--SC-CTTCCTTSEEEEEEE
T ss_pred ccccCCCEeCCCCEEEEEC-C---EEEEeCCCCEEEE--ec-CCCCCCCcEEEEEEE
Confidence 3468999999999999984 4 7899999998743 34 688999998888754
No 117
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=73.96 E-value=2.3 Score=49.36 Aligned_cols=35 Identities=14% Similarity=0.331 Sum_probs=28.4
Q ss_pred eEEEcCCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 102 MDVETFYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 102 ~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
..|.||..|+|.++++++||.|..|++|++|+...
T Consensus 1096 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamK 1130 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMK 1130 (1165)
T ss_dssp TEEECSSCEEEEEECCSSCCCC---CEEEEEEC--
T ss_pred ceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEccc
Confidence 57999999999999999999999999999997543
No 118
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=70.40 E-value=5.8 Score=40.72 Aligned_cols=44 Identities=9% Similarity=0.261 Sum_probs=35.9
Q ss_pred EecceeeEEEcCCCeEEEEE-------------------------------ecCCCCeecCCCeEEEEecChhhHH
Q 011684 96 ESDKADMDVETFYDGILAAI-------------------------------VVPEGESAPVGAAIGILAETEAEVA 140 (479)
Q Consensus 96 et~K~~~~v~ap~~G~v~~i-------------------------------~~~~g~~v~~G~~l~~i~~~~~~~~ 140 (479)
..-+ ..+|.|+.+|+|..| +.+.||.|..|++|++|....+..+
T Consensus 323 ~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~~~~ 397 (423)
T 2dsj_A 323 PLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGDRVERGEALALVYHRRRGLE 397 (423)
T ss_dssp CCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEEECSSSHH
T ss_pred CCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCCCEeCCCCeEEEEEeCCccHH
Confidence 4466 889999999999887 6788999999999999976544433
No 119
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=68.71 E-value=1 Score=42.51 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=0.0
Q ss_pred CCCeEEEEEecCCCCeecCCCeEEEEecCh
Q 011684 107 FYDGILAAIVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 107 p~~G~v~~i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
-..|+|.+|++++||.|..|++|++|+.+.
T Consensus 15 m~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK 44 (229)
T 1zy8_K 15 MEEGNIVKWLKKEGEAVSAGDALCEIETDK 44 (229)
T ss_dssp ------------------------------
T ss_pred CCcEEEEEEecCCCCEeCCCCEEEEEecCC
Confidence 358999999999999999999999997544
No 120
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=68.64 E-value=6.2 Score=40.69 Aligned_cols=40 Identities=8% Similarity=0.174 Sum_probs=34.1
Q ss_pred ecceeeEEEcCCCeEEEEE-------------------------------ecCCCCeecCCCeEEEEecCh
Q 011684 97 SDKADMDVETFYDGILAAI-------------------------------VVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 97 t~K~~~~v~ap~~G~v~~i-------------------------------~~~~g~~v~~G~~l~~i~~~~ 136 (479)
.-+...+|.|+.+|+|..| +++.||.|..|++|++|.+.+
T Consensus 334 ~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G~~V~~g~~l~~i~~~~ 404 (436)
T 3h5q_A 334 QAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIHSNR 404 (436)
T ss_dssp CCSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEEESS
T ss_pred CCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCcCEeCCCCeEEEEeCCh
Confidence 3567889999999999988 577899999999999998433
No 121
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=68.22 E-value=2.8 Score=37.99 Aligned_cols=42 Identities=19% Similarity=0.329 Sum_probs=30.8
Q ss_pred eeEEEecCCCCCCC--ceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 57 KIREIFMPALSSTM--TEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 57 ~~~~i~~P~l~~~~--~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
+..+|.+- +|-+- -+|+--+++|++||+|++||+|+++.-++
T Consensus 98 ~G~EvLIH-IGiDTV~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD~~~ 141 (183)
T 3our_B 98 DGVELFVH-FGIDTVELKGEGFTRIAEEGQTVKAGDTVIEFDLAL 141 (183)
T ss_dssp TSCEEEEE-CSBSGGGGTTTTEEECSCTTCEECTTCEEEEECHHH
T ss_pred CCCEEEEE-ecccccccCCccceEEEeCcCEEcCCCEEEEECHHH
Confidence 34566555 44332 24777899999999999999999987543
No 122
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=68.10 E-value=6.4 Score=40.56 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=36.4
Q ss_pred EEecceeeEEEcCCCeEEEEE-------------------------------ecCCCCeecCCCeEEEEecChhh
Q 011684 95 VESDKADMDVETFYDGILAAI-------------------------------VVPEGESAPVGAAIGILAETEAE 138 (479)
Q Consensus 95 vet~K~~~~v~ap~~G~v~~i-------------------------------~~~~g~~v~~G~~l~~i~~~~~~ 138 (479)
+..-|...+|.|+.+|+|..| +.+.||.|..|++|++|....+.
T Consensus 329 ~~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~~ 403 (433)
T 1brw_A 329 LPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGDRVQKGEALATIHSNRPD 403 (433)
T ss_dssp SCCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTTCEECTTCEEEEEEESSSC
T ss_pred CCCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEEcCCcc
Confidence 345677889999999999887 67889999999999999765443
No 123
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=65.99 E-value=5 Score=40.40 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=29.4
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
.--|+||.+|.+. ..++.|+.|..|++|++|.+
T Consensus 290 ~~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d 322 (368)
T 3fmc_A 290 YRKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLR 322 (368)
T ss_dssp EEEEECSSCEEEE-ECSCTTCCBCTTCEEEEEEC
T ss_pred cEEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEc
Confidence 3458999999994 78999999999999999987
No 124
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=64.54 E-value=7.8 Score=40.00 Aligned_cols=42 Identities=7% Similarity=0.165 Sum_probs=35.7
Q ss_pred EecceeeEEEcCCCeEEEEE-------------------------------ecCCCCeecCCCeEEEEecChh
Q 011684 96 ESDKADMDVETFYDGILAAI-------------------------------VVPEGESAPVGAAIGILAETEA 137 (479)
Q Consensus 96 et~K~~~~v~ap~~G~v~~i-------------------------------~~~~g~~v~~G~~l~~i~~~~~ 137 (479)
..-|...+|.|+.+|+|..| +.+.||.|..|++|++|....+
T Consensus 335 ~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 335 PTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDE 407 (440)
T ss_dssp CCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTTCEEBTTBCSEEEEESSH
T ss_pred CCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEecCCH
Confidence 34677889999999999887 6788999999999999986544
No 125
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=63.87 E-value=5.5 Score=40.50 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=27.5
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVEN 473 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le~ 473 (479)
+-|++++||.++||.-+..|++.+.+++..
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 181 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCRG 181 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999999998753
No 126
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=63.59 E-value=6.2 Score=39.06 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=29.3
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
..-|+||.+|.+. -.++.||.|..|++|++|.+.
T Consensus 257 ~~~v~A~~~Gl~~-~~v~~Gd~V~~G~~la~I~dp 290 (331)
T 3na6_A 257 DCYLFSEHDGLFE-IMIDLGEPVQEGDLVARVWSP 290 (331)
T ss_dssp CCCEECSSCEEEE-ESSCTTCEECTTCEEEEEECS
T ss_pred cEEEeCCCCeEEE-EcCCCCCEEcCCCEEEEEEcC
Confidence 4458999999884 479999999999999999874
No 127
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=62.44 E-value=1.6 Score=45.06 Aligned_cols=29 Identities=21% Similarity=0.535 Sum_probs=0.0
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 71 TEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 71 ~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
..|+|.++++++||.|..||+|+.|+.+.
T Consensus 52 ~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 52 VKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp -----------------------------
T ss_pred CCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 46999999999999999999999998654
No 128
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=61.45 E-value=73 Score=37.10 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=24.5
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 445 LVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 445 ~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
-|-+++||-++||+-...|+++|.++..
T Consensus 140 ~l~~~~HHii~DG~S~~~l~~el~~~Y~ 167 (1304)
T 2vsq_A 140 EWVWSYHHIILDGWCFGIVVQDLFKVYN 167 (1304)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCceeechhhHHHHHHHHHHHHH
Confidence 3568999999999999999999988653
No 129
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=61.42 E-value=1.4e+02 Score=30.30 Aligned_cols=166 Identities=14% Similarity=0.126 Sum_probs=86.7
Q ss_pred EEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCcccEEEEEEeC------C--Ce--
Q 011684 285 VGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNANINIAVAVAIN------G--GL-- 354 (479)
Q Consensus 285 ~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~i~i~~aV~~~------~--gl-- 354 (479)
+...++.....++++..++.|+|++.+++-|.+.+|.++- +. +++-+|+.+..- + |.
T Consensus 306 ~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~-------~~------~dv~~g~~~~gR~~~~~~~~vG~f~ 372 (520)
T 2jgp_A 306 CTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYA-------GQ------EDIIVGTPITGRSHADLEPIVGMFV 372 (520)
T ss_dssp EEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-------TC------SCEEEEEEECCCCSGGGTTCCSCCC
T ss_pred EEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CC------CCeEEEeccCCCCchhhhccEEeee
Confidence 3444554333344444444599999999999999987642 11 334455555421 1 32
Q ss_pred -EEeE-EecCCCCCHHHHHHHHHHHHHHHHcCC-C---------C------CCCCCCCeEEEeecCCC----Cccceeec
Q 011684 355 -ITPV-LQDADKLDLYLLSQKWKELVEKARSKQ-L---------Q------PHEYNSGTFTLSNLGMF----GVDRFDAI 412 (479)
Q Consensus 355 -~~pv-i~~a~~~sl~ei~~~~~~l~~~ar~~~-l---------~------~~d~~~~tftISnlg~~----G~~~ftpi 412 (479)
++|+ +......++.++.+.+++....+...+ . . ...+..-.|.+.|.+.. +...+..+
T Consensus 373 n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~~i~~~l~~~r~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~ 452 (520)
T 2jgp_A 373 NTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFEELVEKLAIARDLSRNPLFDTVFTFQNSTEEVMTLPECTLAPF 452 (520)
T ss_dssp EEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHHHHHHHTCCCCCTTSCSSCSEEEEEECCCCSCCCCSSEEEEEC
T ss_pred eeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHhcCCCCCCCCCcEEEEEEEecCCCccccCCCceeEEe
Confidence 2444 334456789999998887655543221 1 1 11112223444444321 11111221
Q ss_pred CCCCC--ce--EEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHh----cCCc
Q 011684 413 LPPGQ--GA--IMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIV----ENPE 475 (479)
Q Consensus 413 i~~~~--~a--il~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~l----e~p~ 475 (479)
..... .+ -|.+ .... .+|. +.+.+.||-.+.+-..+.+|++.|..+| ++|+
T Consensus 453 ~~~~~~~~~~~~L~l-----~~~~-~~~~------l~~~~~y~~~~~~~~~i~~l~~~~~~lL~~l~~~p~ 511 (520)
T 2jgp_A 453 MTDETGQHAKFDLTF-----SATE-EREE------MTIGVEYSTSLFTRETMERFSRHFLTIAASIVQNPH 511 (520)
T ss_dssp SSCSSCSBCSSSEEE-----EEEE-CSSC------EEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ecCCCCcceeeeeEE-----EEEE-CCCe------EEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHhCcc
Confidence 11110 00 0111 1111 1332 7788999999999998888877776655 5565
No 130
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=59.47 E-value=6.9 Score=40.12 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=27.3
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
+-|+++++|.++||.-+..|++.+.+++.
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 77899999999999999999999999876
No 131
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=59.47 E-value=6.2 Score=40.27 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=27.5
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVEN 473 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le~ 473 (479)
+-|+++++|.++||.-+..|++.+.+++..
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999999988754
No 132
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=58.93 E-value=6.8 Score=40.08 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=27.3
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
+-|+++++|.++||.-+..|++.+.+++.
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 77899999999999999999999999876
No 133
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=58.71 E-value=6.7 Score=38.07 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=17.9
Q ss_pred EEEEEcCCCCeecCCCeEEEEE
Q 011684 75 IVSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 75 i~~w~v~~Gd~V~~g~~l~~ve 96 (479)
-++|++++|+.|++||+|++|+
T Consensus 72 ~v~~~~~dG~~v~~g~~v~~i~ 93 (284)
T 1qpo_A 72 RVLDRVEDGARVPPGEALMTLE 93 (284)
T ss_dssp EEEEECCTTCEECTTCEEEEEE
T ss_pred EEEEEcCCCCEecCCcEEEEEE
Confidence 4678888888888888888876
No 134
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=57.88 E-value=8.5 Score=39.30 Aligned_cols=30 Identities=17% Similarity=0.283 Sum_probs=27.5
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVEN 473 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le~ 473 (479)
+-|+++++|.++||.-...|++.+.+++..
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg 179 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARG 179 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCC
Confidence 778999999999999999999999998753
No 135
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=57.65 E-value=5.8 Score=35.22 Aligned_cols=27 Identities=22% Similarity=0.392 Sum_probs=21.6
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEec
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESD 98 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~ 98 (479)
+|+=.+.+|++||+|++||+|+++.-+
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (161)
T 1f3z_A 92 KGEGFKRIAEEGQRVKVGDTVIEFDLP 118 (161)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHH
T ss_pred CCCccEEEEeCcCEECCCCEEEEECHH
Confidence 344455699999999999999998754
No 136
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=56.52 E-value=6.3 Score=38.27 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.1
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|++++||.|++||+|++|+
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~ 94 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVR 94 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEE
Confidence 578888888888888888776
No 137
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=56.24 E-value=6.5 Score=38.22 Aligned_cols=21 Identities=10% Similarity=0.484 Sum_probs=17.5
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|++++|+.|++||+|++|+
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~ 97 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELK 97 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEE
Confidence 478888888888888888876
No 138
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=55.96 E-value=6.9 Score=38.23 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=17.8
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|++++|+.|++||+|++|+
T Consensus 86 v~~~~~dG~~v~~g~~v~~i~ 106 (300)
T 3l0g_A 86 YEIHKKDGDITGKNSTLVSGE 106 (300)
T ss_dssp EEECCCTTCEECSSCEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEE
Confidence 578888888888888888876
No 139
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=54.83 E-value=6 Score=38.46 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=15.9
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|++++||.|++||+|++|+
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~ 93 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIE 93 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEE
Confidence 567788888888877777765
No 140
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=53.42 E-value=9.2 Score=36.76 Aligned_cols=21 Identities=0% Similarity=0.085 Sum_probs=13.4
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|.+++|+.|..||+|++|+
T Consensus 60 v~~~~~eG~~v~~g~~~~~v~ 80 (273)
T 2b7n_A 60 CVQTIKDKERFKPKDALMEIR 80 (273)
T ss_dssp EEEECCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEE
Confidence 356666666666666666655
No 141
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=53.04 E-value=7.8 Score=37.85 Aligned_cols=21 Identities=33% Similarity=0.621 Sum_probs=14.9
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 011684 76 VSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 76 ~~w~v~~Gd~V~~g~~l~~ve 96 (479)
++|++++|+.|.+||+|++|+
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~ 108 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELR 108 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEE
Confidence 467777777777777777665
No 142
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=52.28 E-value=11 Score=33.53 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=34.2
Q ss_pred eecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecChhh
Q 011684 85 VLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAETEAE 138 (479)
Q Consensus 85 ~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~~~~ 138 (479)
.+++|+.||.++ .+|+..-+.+.+|+.|..|+.||.+.....+
T Consensus 95 ~lkkGt~L~lvp-----------aeG~~V~~i~~~G~rV~kgd~lA~i~T~KGE 137 (169)
T 3d4r_A 95 YLKAGTKLISVP-----------AEGYKVYPIMDFGFRVLKGYRLATLESKKGD 137 (169)
T ss_dssp EECTTCBCEEEE-----------ECSSEEEECCCCSEEECTTCEEEEEECTTCC
T ss_pred EEcCCCEEEEEE-----------eCceEEEEEcCcCcEeccCCeEEEEEecCce
Confidence 456777778776 5677778889999999999999999765443
No 143
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=51.93 E-value=5.5 Score=35.41 Aligned_cols=28 Identities=29% Similarity=0.442 Sum_probs=22.6
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
+|+=.+.+|++||+|++||+|+++.-++
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~~ 119 (162)
T 1ax3_A 92 KGEGFTSFVSEGDRVEPGQKLLEVDLDA 119 (162)
T ss_dssp TTTTEEESCCCCSEECSEEEEEEECHHH
T ss_pred CCCccEEEEeCCCEEcCCCEEEEECHHH
Confidence 4555567999999999999999987543
No 144
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=51.69 E-value=8.4 Score=38.01 Aligned_cols=22 Identities=18% Similarity=0.576 Sum_probs=17.6
Q ss_pred EEEEEcCCCCeecCCCeEEEEE
Q 011684 75 IVSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 75 i~~w~v~~Gd~V~~g~~l~~ve 96 (479)
-++|.+++|+.|.+||+|++|+
T Consensus 109 ~v~~~~~dG~~v~~g~~l~~v~ 130 (320)
T 3paj_A 109 SIEWHVQDGDTLTPNQTLCTLT 130 (320)
T ss_dssp EEEESSCTTCEECTTCEEEEEE
T ss_pred EEEEEeCCCCEecCCCEEEEEE
Confidence 3578888888888888888776
No 145
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=51.03 E-value=18 Score=37.57 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=34.2
Q ss_pred EEecceeeEEEcCCCeEEEEE-----------------------------ecCCCCeecCCCeEEEEecCh
Q 011684 95 VESDKADMDVETFYDGILAAI-----------------------------VVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 95 vet~K~~~~v~ap~~G~v~~i-----------------------------~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+-.-|...+|.|+.+|+|..| +.+.||.|..|++|++|....
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 344677888999999999554 678899999999999997543
No 146
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=49.96 E-value=9.3 Score=37.26 Aligned_cols=22 Identities=18% Similarity=0.557 Sum_probs=18.5
Q ss_pred EEEEEcCCCCeecCCCeEEEEE
Q 011684 75 IVSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 75 i~~w~v~~Gd~V~~g~~l~~ve 96 (479)
-++|.+++|+.|..||+|++|+
T Consensus 86 ~v~~~~~dG~~v~~g~~~~~v~ 107 (296)
T 1qap_A 86 RLTWHVDDGDAIHANQTVFELQ 107 (296)
T ss_dssp EEEESCCTTCEECTTCEEEEEE
T ss_pred EEEEEcCCCCEecCCCEEEEEE
Confidence 3678999999999998888876
No 147
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=48.25 E-value=20 Score=32.20 Aligned_cols=65 Identities=12% Similarity=0.044 Sum_probs=43.2
Q ss_pred eeEEEecCC--CC---C---CCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCe
Q 011684 57 KIREIFMPA--LS---S---TMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAA 128 (479)
Q Consensus 57 ~~~~i~~P~--l~---~---~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~ 128 (479)
..++|..|. .+ . ....|+|+..- |- .++|+.+.-...+.+-. .++.|++||.|..||+
T Consensus 33 ~GiDi~~~~G~~g~~gtpV~A~~~G~V~~~~---------G~-~V~I~H~~g~~t~Y~HL----~~i~V~~G~~V~~Gq~ 98 (182)
T 3it5_A 33 SSFDASYDWPRWGSATYSVVAAHAGTVRVLS---------RC-QVRVTHPSGWATNYYHM----DQIQVSNGQQVSADTK 98 (182)
T ss_dssp CEEEEESSCCCTTSCCCEEECSSSEEEEEEE---------TT-EEEEECTTSEEEEEESE----ESCCCCTTCEECTTCE
T ss_pred ecEEecCCCCCCCCCCCEEEeccCEEEEEEC---------Ce-EEEEEECCcEEEEEEcC----CccccCCCCEEcCCCE
Confidence 567888882 11 1 14578887754 32 45566655444444433 4678999999999999
Q ss_pred EEEEecC
Q 011684 129 IGILAET 135 (479)
Q Consensus 129 l~~i~~~ 135 (479)
|+.+...
T Consensus 99 IG~vG~t 105 (182)
T 3it5_A 99 LGVYAGN 105 (182)
T ss_dssp EEEECSS
T ss_pred EEeecCc
Confidence 9999764
No 148
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=46.65 E-value=9.9 Score=39.15 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=25.2
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 69 TMTEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 69 ~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
-+..+-=+.++++.||.|++||+|++|=.++
T Consensus 374 ~id~~~Gi~l~~~~G~~V~~g~~l~~i~~~~ 404 (436)
T 3h5q_A 374 DIDLAVGIVLNKKIGDKVEEGESLLTIHSNR 404 (436)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEESS
T ss_pred CCCCCCceEEecCCcCEeCCCCeEEEEeCCh
Confidence 3455666899999999999999999986433
No 149
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=46.51 E-value=21 Score=35.43 Aligned_cols=37 Identities=22% Similarity=0.197 Sum_probs=30.6
Q ss_pred cceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 98 DKADMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 98 ~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
.+...-++|+.+|.+ +..++.|+.|..|++|+.|.+.
T Consensus 264 ~~~~~~v~A~~~G~~-~~~~~~g~~V~~G~~La~i~d~ 300 (354)
T 3cdx_A 264 READAYVMAPRTGLF-EPTHYVGEEVRTGETAGWIHFV 300 (354)
T ss_dssp CCGGGEEECSSCEEE-EESCCTTCEECTTSEEEEEECT
T ss_pred cCCcEEEECCCCEEE-EEeCCCCCEeCCCCEEEEEECC
Confidence 345566899999966 5678999999999999999863
No 150
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=46.26 E-value=7.2 Score=35.23 Aligned_cols=26 Identities=15% Similarity=0.032 Sum_probs=21.8
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEe
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVES 97 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet 97 (479)
-+-+.++.|++||+|++||+|..+-.
T Consensus 79 Y~HL~~i~V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 79 YYHMDQIQVSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp EESEESCCCCTTCEECTTCEEEEECS
T ss_pred EEcCCccccCCCCEEcCCCEEEeecC
Confidence 34556778999999999999999864
No 151
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=44.74 E-value=4.6 Score=31.89 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=20.1
Q ss_pred eeEEEecCCCCCCCceEEEEEEEcCCCCeecCCCeEE
Q 011684 57 KIREIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVV 93 (479)
Q Consensus 57 ~~~~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~ 93 (479)
...++.+|.-. +++|++||.|++||.|.
T Consensus 55 e~~eY~Ip~~~---------~l~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 55 DPYEEMIPKWR---------QLNVFEGERVERGDVIS 82 (84)
T ss_dssp CCEEEECCTTS---------CCSSCTTEEECBSCSSB
T ss_pred eEEEEECCCCC---------ceEeCCCCEECCCCCcc
Confidence 34566666433 45799999999999874
No 152
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=44.61 E-value=1.4e+02 Score=34.60 Aligned_cols=163 Identities=11% Similarity=0.160 Sum_probs=88.0
Q ss_pred EEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCcccEEEEEEe-CC---------Ce
Q 011684 285 VGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNANINIAVAVAI-NG---------GL 354 (479)
Q Consensus 285 ~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~i~i~~aV~~-~~---------gl 354 (479)
+...++-....++++..++.++|++.+++-|.+..|.++ .+. +++-+|+.+.. +. |.
T Consensus 231 ~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~-------tg~------~dvv~G~pvsgR~~~~~~~~~~vG~ 297 (1304)
T 2vsq_A 231 LLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRY-------QQS------GDLAFGTVVSGRPAEIKGVEHMVGL 297 (1304)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-------HTC------SEEEEEEEECCCCTTSTTGGGCCSS
T ss_pred EEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCC------CCEEEEEEeCCCCccchhhhccccc
Confidence 334455444455555555569999999999999999764 222 23456666653 11 32
Q ss_pred ---EEeE-EecCCCCCHHHHHHHHHHHHHHHHcCC-C---------CCCCCCCCeEEEeecCCCCcc-------ce--ee
Q 011684 355 ---ITPV-LQDADKLDLYLLSQKWKELVEKARSKQ-L---------QPHEYNSGTFTLSNLGMFGVD-------RF--DA 411 (479)
Q Consensus 355 ---~~pv-i~~a~~~sl~ei~~~~~~l~~~ar~~~-l---------~~~d~~~~tftISnlg~~G~~-------~f--tp 411 (479)
++|+ +......++.++.+.+++....+...+ + ....+....|.+.|.+..+.. .+ ..
T Consensus 298 fvntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~i~~~l~~~~lf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 377 (1304)
T 2vsq_A 298 FINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYDIQSQADQPKLIDHIIVFENYPLQDAKNEESSENGFDMVD 377 (1304)
T ss_dssp CCEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHHHHHSSSCSSSCCCEEEECSSCHHHHSCCCHHHHSEEEEE
T ss_pred ceeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHHHHHHhCCCcccceeEEEeecccccccccccccCCceeEe
Confidence 2343 344567899999999887665554322 1 111222334445544311100 00 00
Q ss_pred cCCCCCceEEEeCcceEEEEEcCCCeEEEEEEEEEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 412 ILPPGQGAIMAVGASKPTVVADADGFFGVKSKMLVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 412 ii~~~~~ail~vG~~~~~~v~~~~G~i~~r~~m~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
+-..... .+--...+..++. +.+.+.||..+.|-..+.++++.|..+|+
T Consensus 378 ~~~~~~~------~~dL~l~~~~~~~------l~~~~~y~~~lf~~~~i~~l~~~~~~lL~ 426 (1304)
T 2vsq_A 378 VHVFEKS------NYDLNLMASPGDE------MLIKLAYNENVFDEAFILRLKSQLLTAIQ 426 (1304)
T ss_dssp EEECCCC------CSSEEEEEECSSS------CEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred eeccccc------ccCeEEEEecCCc------EEEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 0000000 0000111111232 66789999999999999888887776663
No 153
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=44.27 E-value=11 Score=36.80 Aligned_cols=20 Identities=35% Similarity=0.484 Sum_probs=11.3
Q ss_pred EEEcCCCCeecCCCeEEEEE
Q 011684 77 SWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~ve 96 (479)
+|.+++|+.|..||+|++|+
T Consensus 74 ~~~~~dG~~v~~g~~l~~v~ 93 (299)
T 2jbm_A 74 SWFLPEGSKLVPVARVAEVR 93 (299)
T ss_dssp EESSCTTCEECSSEEEEEEE
T ss_pred EEEcCCCCCCCCCCEEEEEE
Confidence 45555555555555555554
No 154
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=43.67 E-value=14 Score=37.82 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=25.6
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 69 TMTEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 69 ~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
.+..+-=+.++++.||+|++||+|+.|=+++
T Consensus 363 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 363 PIDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 3445556899999999999999999997654
No 155
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=43.63 E-value=14 Score=37.90 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=25.7
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 69 TMTEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 69 ~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
.+..+-=+.++++.||+|++||+|+.|=+++
T Consensus 371 ~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 371 VIDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 3455556899999999999999999997764
No 156
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=41.60 E-value=17 Score=37.85 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=24.1
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 71 TEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 71 ~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
..+-=+.++++.||+|++||+|+.|=+++
T Consensus 408 d~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 408 RLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp CSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 33455789999999999999999987653
No 157
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=38.37 E-value=32 Score=29.47 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=26.9
Q ss_pred EEcCCCeEEEEEec-CCCCeecCCCeEEEEecCh
Q 011684 104 VETFYDGILAAIVV-PEGESAPVGAAIGILAETE 136 (479)
Q Consensus 104 v~ap~~G~v~~i~~-~~g~~v~~G~~l~~i~~~~ 136 (479)
+.+|.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 39 ~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K 72 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGREVKKGEVVASIESVK 72 (136)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred hhcccCCCcEEEEecCCCCEEeCCCEEEEEEEcc
Confidence 45667787877776 9999999999999997543
No 158
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=37.87 E-value=29 Score=32.74 Aligned_cols=69 Identities=22% Similarity=0.171 Sum_probs=41.2
Q ss_pred eeEEEecCCCCC-----CCceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEE
Q 011684 57 KIREIFMPALSS-----TMTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGI 131 (479)
Q Consensus 57 ~~~~i~~P~l~~-----~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~ 131 (479)
..++|..| .|. ....|+|+.+-...| -| -+++|+...-...+.+ -|.++.|+.|+.|..|++|+.
T Consensus 82 ~GIDi~a~-~Gt~~pV~A~~~G~V~~~g~~~~----~G-~~ViI~Hg~G~~t~Y~----HL~~i~Vk~Gd~V~~Gq~IG~ 151 (245)
T 3tuf_B 82 KGIDLAEK-DGKDFDVSASLSGTVVKAEKDPV----LG-YVVEVEHADGLSTVYQ----SLSEVSVEQGDKVKQNQVIGK 151 (245)
T ss_dssp CSEEEEET-TCCCCEEECSSCEEEEEEEEETT----TE-EEEEEECSTTEEEEEE----EESEESCCTTCEECTTCEEEE
T ss_pred ccEEEeCC-CCCcceEEeCcCeEEEEEEecCC----Cc-eEEEEEeCCCEEEEEe----cCCccccCCCCEECCCCEEEE
Confidence 34566665 233 234677766643322 12 2344555443333333 344678999999999999999
Q ss_pred EecC
Q 011684 132 LAET 135 (479)
Q Consensus 132 i~~~ 135 (479)
+...
T Consensus 152 vG~t 155 (245)
T 3tuf_B 152 SGKN 155 (245)
T ss_dssp CBCC
T ss_pred eCCc
Confidence 9765
No 159
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=37.73 E-value=15 Score=35.57 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=13.7
Q ss_pred EecCCCCeecCCCeEEEEecC
Q 011684 115 IVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 115 i~~~~g~~v~~G~~l~~i~~~ 135 (479)
+.|++||.|..|++|+.+...
T Consensus 232 i~V~~G~~V~~Gq~IG~vG~t 252 (282)
T 2hsi_A 232 IDVKLGQQVPRGGVLGKVGAT 252 (282)
T ss_dssp ECSCTTCEECTTCEEEECCCT
T ss_pred cccCCcCEECCCCEEEEECCC
Confidence 356677777777777766543
No 160
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=37.56 E-value=14 Score=34.89 Aligned_cols=27 Identities=7% Similarity=0.088 Sum_probs=23.0
Q ss_pred eEEEEEEEcCCCCeecCCCeEEEEEec
Q 011684 72 EGKIVSWIKSEGDVLSKGESVVVVESD 98 (479)
Q Consensus 72 eg~i~~w~v~~Gd~V~~g~~l~~vet~ 98 (479)
-+-+-++.|++||.|++||+|+.+-..
T Consensus 129 Y~HL~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 129 YQSLSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EEEESEESCCTTCEECTTCEEEECBCC
T ss_pred EecCCccccCCCCEECCCCEEEEeCCc
Confidence 456668899999999999999998754
No 161
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=37.39 E-value=15 Score=35.65 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=17.2
Q ss_pred EecCCCCeecCCCeEEEEecCh
Q 011684 115 IVVPEGESAPVGAAIGILAETE 136 (479)
Q Consensus 115 i~~~~g~~v~~G~~l~~i~~~~ 136 (479)
+.|++|+.|..|++|+.+...+
T Consensus 239 i~Vk~Gq~V~~GqvIG~vG~TG 260 (291)
T 1qwy_A 239 LTVSAGDKVKAGDQIAYSGSTG 260 (291)
T ss_dssp ECCCTTCEECTTCEEEECCCCS
T ss_pred cccCCcCEECCCCEEEEECCCC
Confidence 4688888888888888886543
No 162
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=36.07 E-value=1.9e+02 Score=27.92 Aligned_cols=86 Identities=12% Similarity=0.049 Sum_probs=54.6
Q ss_pred EEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccCCCeeEEcCcccEEEEEEe-C---------C--
Q 011684 285 VGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKDGKSFTYNANINIAVAVAI-N---------G-- 352 (479)
Q Consensus 285 ~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~~~~i~~~~~i~i~~aV~~-~---------~-- 352 (479)
....++.....++++..++.|+|++.+++-|.+.+|.++ +..+. +.+.+|+.+.. . +
T Consensus 214 ~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~r~-----~~~~~------~~v~~g~~~~~R~~~~~~~~~~~~~ 282 (422)
T 1q9j_A 214 TRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQL-----RNTPH------VPIPYVYPVDLRFVLAPPVAPTEAT 282 (422)
T ss_dssp EEECCCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHH-----HTCSS------CCEEEEEEEETTTTSSSCCCTTTBS
T ss_pred eEEEeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc-----ccCCC------ceEEEeeeeecccccCCCCChhhhh
Confidence 344566655666677777789999999999999999975 11111 33445555542 1 1
Q ss_pred ---CeEEeEEecCCCCCHHHHHHHHHHHHHHH
Q 011684 353 ---GLITPVLQDADKLDLYLLSQKWKELVEKA 381 (479)
Q Consensus 353 ---gl~~pvi~~a~~~sl~ei~~~~~~l~~~a 381 (479)
|.++-.+......++.++.+++++....+
T Consensus 283 ~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 283 NLLGAASYLAEIGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CCEEEEEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred hhheeeeeeeeccCCCCHHHHHHHHHHHHHHH
Confidence 23333444445668999988887665544
No 163
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=34.93 E-value=34 Score=32.96 Aligned_cols=14 Identities=14% Similarity=0.135 Sum_probs=10.1
Q ss_pred eEEEcCCCeEEEEE
Q 011684 102 MDVETFYDGILAAI 115 (479)
Q Consensus 102 ~~v~ap~~G~v~~i 115 (479)
..|.|+.+|+|...
T Consensus 191 tpV~A~~~G~V~~~ 204 (282)
T 2hsi_A 191 TPIKAPAAGKVILI 204 (282)
T ss_dssp CEEECSSCEEEEEE
T ss_pred CeEEeccCeEEEEE
Confidence 45778888888665
No 164
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=33.19 E-value=15 Score=37.90 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=25.8
Q ss_pred CCceEEEEEEEcCCCCeecCCCeEEEEEecc
Q 011684 69 TMTEGKIVSWIKSEGDVLSKGESVVVVESDK 99 (479)
Q Consensus 69 ~~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K 99 (479)
.+..+-=+.++++.||+|++||+|+.|=+++
T Consensus 376 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 406 (440)
T 2tpt_A 376 TIDYSVGFTDMARLGDQVDGQRPLAVIHAKD 406 (440)
T ss_dssp CCCSSCEEESCCCTTCEEBTTBCSEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEecCC
Confidence 3455566889999999999999999998764
No 165
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=33.16 E-value=27 Score=34.31 Aligned_cols=28 Identities=11% Similarity=0.073 Sum_probs=25.0
Q ss_pred EEEEEecccccchHHHHHHHHHHHHHhc
Q 011684 445 LVNVTADHRIIYGADLAAFLQTFSKIVE 472 (479)
Q Consensus 445 ~lslt~DHRvvDG~~aa~Fl~~l~~~le 472 (479)
-|.+++||-++||.-...|+++|.++..
T Consensus 117 ~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 117 ELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 3679999999999999999999988764
No 166
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=32.47 E-value=29 Score=30.80 Aligned_cols=33 Identities=6% Similarity=0.326 Sum_probs=26.1
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
.+.|.+++.++++|||++.-.. -.|+.+|++.|
T Consensus 67 ~~d~~a~~~l~~~Gid~s~h~a----r~l~~~d~~~~ 99 (173)
T 4etm_A 67 PPHEGTQEILRREGISFDGMLA----RQVSEQDLDDF 99 (173)
T ss_dssp CCCHHHHHHHHHTTCCCTTCCC----CBCCHHHHHHC
T ss_pred CCCHHHHHHHHHCCccccCCcc----ccCCHhhcCCC
Confidence 4679999999999999974332 25899998766
No 167
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=31.73 E-value=20 Score=33.96 Aligned_cols=20 Identities=15% Similarity=0.521 Sum_probs=13.1
Q ss_pred ecCCCCeecCCCeEEEEecC
Q 011684 116 VVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 116 ~~~~g~~v~~G~~l~~i~~~ 135 (479)
.|++||.|..||+|+.+...
T Consensus 183 ~V~~G~~V~~Gq~IG~vG~t 202 (252)
T 3nyy_A 183 ELEKGDPVKAGDLLGYMGDS 202 (252)
T ss_dssp SCCTTCEECTTCEEEECBCC
T ss_pred cCCCCCEECCCCEEEEECCC
Confidence 46667777777777766543
No 168
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=31.25 E-value=20 Score=34.80 Aligned_cols=20 Identities=25% Similarity=0.499 Sum_probs=11.4
Q ss_pred EEEcCCCCeecCC------CeEEEEE
Q 011684 77 SWIKSEGDVLSKG------ESVVVVE 96 (479)
Q Consensus 77 ~w~v~~Gd~V~~g------~~l~~ve 96 (479)
+|.+++|+.|..| |+|++|+
T Consensus 70 ~~~~~eG~~v~~g~~~~~~~~l~~v~ 95 (294)
T 3c2e_A 70 EWLFKEGSFLEPSKNDSGKIVVAKIT 95 (294)
T ss_dssp EESSCTTCEECGGGSSSSCEEEEEEE
T ss_pred EEEeCCCCEeCCCCCCCCCcEEEEEE
Confidence 4556666666666 5555544
No 169
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=31.16 E-value=3.2e+02 Score=27.24 Aligned_cols=93 Identities=13% Similarity=0.002 Sum_probs=50.8
Q ss_pred EEEEEEEeccHHHHHHHHhCCCCCC--HHHHHHHHHHHHHhhC----ccccccccCCCeeEEcCcccEEEEEEe---CC-
Q 011684 283 FRVGYPIITDALDALYEKVKPKGVT--MTALLAKAAAMALVQH----PVVNASCKDGKSFTYNANINIAVAVAI---NG- 352 (479)
Q Consensus 283 ~~~~~~iDvt~l~~~~~~~k~~~~s--~~~~likAva~Al~~~----P~~n~~~~~~~~i~~~~~i~i~~aV~~---~~- 352 (479)
..+...++.....++++..++.|+| ++.+++-|.+.+|.++ ...... + .-.+.+-+|+.+.. ++
T Consensus 216 ~~~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~---~---~g~~dv~~g~~~~gR~~~~~ 289 (493)
T 4hvm_A 216 ETSRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGT---G---TGKDSLYLSTEVDLRDHLQL 289 (493)
T ss_dssp EEEEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC----------------------CEEEEEEEEEHHHHTTC
T ss_pred eeEEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccC---c---CCCCCEEEEeeccCCCCcch
Confidence 3455667766666666656666999 9999999999999876 111100 0 11245667777753 11
Q ss_pred ----Ce---EEeE-EecCC--CCCHHHHHHHHHHHHHHH
Q 011684 353 ----GL---ITPV-LQDAD--KLDLYLLSQKWKELVEKA 381 (479)
Q Consensus 353 ----gl---~~pv-i~~a~--~~sl~ei~~~~~~l~~~a 381 (479)
|. ++|+ +.... ..++.++.+.+++....+
T Consensus 290 ~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 290 GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 32 2444 33344 679999999988755444
No 170
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=30.57 E-value=68 Score=22.53 Aligned_cols=46 Identities=9% Similarity=0.190 Sum_probs=30.2
Q ss_pred ccEEEEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCcccc
Q 011684 280 VPTFRVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVN 327 (479)
Q Consensus 280 vP~~~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n 327 (479)
...|++ .++-+--.++....+.+|.|++.++.+++.+++...-.++
T Consensus 7 ~~~~~l--Rlp~eL~~~l~~~A~~~grS~N~~i~~~L~~~l~~~~r~~ 52 (53)
T 1baz_A 7 MPQVNL--RWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIG 52 (53)
T ss_dssp SCEEEE--ECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSC
T ss_pred CCeeEE--ECCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccccC
Confidence 444543 3554433344444455699999999999999998765443
No 171
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=30.54 E-value=34 Score=28.68 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=25.4
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+.+.++++|||++.-. .-.|+.+|+..+
T Consensus 43 ~~~p~a~~~l~~~Gid~s~~~----ar~l~~~~~~~~ 75 (131)
T 1jf8_A 43 GVNPKAIEAMKEVDIDISNHT----SDLIDNDILKQS 75 (131)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCcccCc----cccCChHHhccC
Confidence 478999999999999996432 235888888654
No 172
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=30.15 E-value=47 Score=32.43 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=28.9
Q ss_pred eeEEEcCCCeEEEEEecCCCCeecCCCeEEEEecC
Q 011684 101 DMDVETFYDGILAAIVVPEGESAPVGAAIGILAET 135 (479)
Q Consensus 101 ~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~~ 135 (479)
..-++|+..|.+. -.++.|+.|+.|++|+.+.+.
T Consensus 257 ~~~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~dp 290 (332)
T 2qj8_A 257 SDQLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHPM 290 (332)
T ss_dssp GGEEECSSSEEEE-ECSCTTCEECTTCEEEEEECT
T ss_pred ceEEeCCCCeEEE-EeCCCCCEeCCCCEEEEEECC
Confidence 3457899999885 678889999999999999764
No 173
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=29.98 E-value=60 Score=27.47 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=26.9
Q ss_pred EEcCCCeEEEEEec-CCCCeecCCCeEEEEecCh
Q 011684 104 VETFYDGILAAIVV-PEGESAPVGAAIGILAETE 136 (479)
Q Consensus 104 v~ap~~G~v~~i~~-~~g~~v~~G~~l~~i~~~~ 136 (479)
+..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 30 ~a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K 63 (131)
T 1hpc_A 30 HAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVK 63 (131)
T ss_dssp HHHHHHCSEEEEECCCTTCEECBTSEEEEEEESS
T ss_pred hhcccCCCceEEEecCCCCEEeCCCEEEEEEecc
Confidence 44566788888877 9999999999999997543
No 174
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=28.79 E-value=47 Score=33.00 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=39.5
Q ss_pred eeEEEecCCCCCC---CceEEEEEEEcCCCCeecCCCeEEEEEecceeeEEEcCCCeEEEEEecCCCCeecCCCeEEEEe
Q 011684 57 KIREIFMPALSST---MTEGKIVSWIKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVPEGESAPVGAAIGILA 133 (479)
Q Consensus 57 ~~~~i~~P~l~~~---~~eg~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~~i~ 133 (479)
..++|..| .|.. ...|+|+..--..| -|- +++|+...-...+.+ -+.++.|++|+.|..|++|+.+.
T Consensus 233 ~GiD~~~~-~gt~V~A~~~G~V~~~~~~~~----~G~-~v~i~h~~g~~t~Y~----hl~~~~v~~G~~V~~G~~Ig~~G 302 (361)
T 2gu1_A 233 NGTDFATP-IGAPVYSTGDGKVIVVRKHPY----AGN-YLVIEHNSVYKTRYL----HLDKILVKKGQLVKRGQKIALAG 302 (361)
T ss_dssp CSEEECCC-TTCEEECSSSEEEEEEEEETT----TEE-EEEEECSSSEEEEEE----EESEECCCTTCEECTTCEEEECC
T ss_pred CceecCCC-CCCeEEEeeCEEEEEeEEeCC----CCe-EEEEEECCCEEEEEe----CcCccccCCcCEECCCCEEEEEC
Confidence 45666666 2322 34666665433211 122 234554433333332 23457899999999999999986
Q ss_pred cCh
Q 011684 134 ETE 136 (479)
Q Consensus 134 ~~~ 136 (479)
..+
T Consensus 303 ~tg 305 (361)
T 2gu1_A 303 ATG 305 (361)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 175
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=28.49 E-value=1.1e+02 Score=32.68 Aligned_cols=53 Identities=21% Similarity=0.320 Sum_probs=39.7
Q ss_pred EcCCCCeecCCCeEEEEEecc-eeeEE--EcCCCeEEEEEecCCCCeecCCCeEEEEec
Q 011684 79 IKSEGDVLSKGESVVVVESDK-ADMDV--ETFYDGILAAIVVPEGESAPVGAAIGILAE 134 (479)
Q Consensus 79 ~v~~Gd~V~~g~~l~~vet~K-~~~~v--~ap~~G~v~~i~~~~g~~v~~G~~l~~i~~ 134 (479)
.+++||.|..||++.+|.-.. .+..| .....|+|++| .+| ...+.++++.+++
T Consensus 130 ~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g-~~~v~~~v~~i~~ 185 (600)
T 3vr4_A 130 TIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESG-SFTIDDPICVIET 185 (600)
T ss_dssp CSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCE-EECTTSCCEEEEE
T ss_pred ccccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCC-cceeceeEEEEec
Confidence 489999999999999987543 23444 33368999987 555 5688889998865
No 176
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=27.93 E-value=40 Score=29.13 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=26.4
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
.+.|.+.++++++|||++.-. .-.|+.+|++.+
T Consensus 61 ~~dp~a~~vl~e~Gidis~h~----ar~l~~~~~~~~ 93 (148)
T 3rh0_A 61 GLNQLSVESIAEVGADMSQGI----PKAIDPELLRTV 93 (148)
T ss_dssp SCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCcCCCe----eeECCHHHhcCC
Confidence 578999999999999997433 236888888766
No 177
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=27.78 E-value=33 Score=29.79 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=25.4
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+++.++++|||++... .-.|+.+|+..+
T Consensus 50 ~~~~~a~~~l~~~Gid~s~~~----ar~l~~~d~~~~ 82 (156)
T 2gi4_A 50 GMHYGTKNKLAQLNIEHKNFT----SKKLTQKLCDES 82 (156)
T ss_dssp CCCHHHHHHHHHTSCSCCCCC----CCBCCHHHHTTC
T ss_pred CCCHHHHHHHHHcCCCccCCc----cccCCHHHhccC
Confidence 588999999999999997543 235788887543
No 178
>1hcz_A Cytochrome F; electron transport, photosynthesis, cytochrome B6F complex, chloroplast transmembrane; HET: HEM; 1.96A {Brassica rapa} SCOP: b.2.6.1 b.84.2.2 PDB: 1tkw_B* 1ctm_A* 2pcf_B*
Probab=27.16 E-value=1.1e+02 Score=28.43 Aligned_cols=51 Identities=20% Similarity=0.255 Sum_probs=33.7
Q ss_pred ceEEEEEEEcCCCCeecCCCeEEEEEecc---eeeEEEcCCCeEEEEEecCCCCeecCCCeEE
Q 011684 71 TEGKIVSWIKSEGDVLSKGESVVVVESDK---ADMDVETFYDGILAAIVVPEGESAPVGAAIG 130 (479)
Q Consensus 71 ~eg~i~~w~v~~Gd~V~~g~~l~~vet~K---~~~~v~ap~~G~v~~i~~~~g~~v~~G~~l~ 130 (479)
..|+|.++... ++|.-...|++.. ...+ .-|... +++|.+||.|..|++|-
T Consensus 175 ~~G~I~~I~~~-----ekgg~~vtI~~~~~G~~v~~-~iP~Gp---eLiV~~G~~v~~~qpLT 228 (252)
T 1hcz_A 175 AGGIISKILRK-----EKGGYEITIVDASNERQVID-IIPRGL---ELLVSEGESIKLDQPLT 228 (252)
T ss_dssp SCEEEEEEEEC-----TTSCEEEEEEETTTTEEEEE-EECTTC---CBCCCTTCEECTTCBSB
T ss_pred CCcEEEEEEEc-----CCCCEEEEEecCCCCCEEEE-ecCCCC---eEEEecCCEEecCCccc
Confidence 45899988875 3577777777654 2222 222222 46789999999999874
No 179
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=26.87 E-value=28 Score=34.66 Aligned_cols=25 Identities=8% Similarity=0.328 Sum_probs=20.8
Q ss_pred EEEEEEEcCCCCeecCCCeEEEEEe
Q 011684 73 GKIVSWIKSEGDVLSKGESVVVVES 97 (479)
Q Consensus 73 g~i~~w~v~~Gd~V~~g~~l~~vet 97 (479)
+-+.++.|++||.|++||+|+.+-.
T Consensus 279 ~hl~~~~v~~G~~V~~G~~Ig~~G~ 303 (361)
T 2gu1_A 279 LHLDKILVKKGQLVKRGQKIALAGA 303 (361)
T ss_dssp EEESEECCCTTCEECTTCEEEECCC
T ss_pred eCcCccccCCcCEECCCCEEEEECC
Confidence 4455678999999999999998854
No 180
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=25.92 E-value=45 Score=29.36 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=25.4
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.|.+.++++|||++... .-.|+.+|++.+
T Consensus 64 ~~~p~a~~vl~e~Gid~s~~~----sr~l~~~~~~~~ 96 (167)
T 2fek_A 64 GADPTAISVAAEHQLSLEGHC----ARQISRRLCRNY 96 (167)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHS
T ss_pred CCCHHHHHHHHHcCCCccCCc----CccCCHHHhccC
Confidence 578999999999999996433 235888887654
No 181
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=25.85 E-value=18 Score=35.66 Aligned_cols=21 Identities=19% Similarity=0.098 Sum_probs=16.4
Q ss_pred EEEcCCCCeecCCCeEEEEEe
Q 011684 77 SWIKSEGDVLSKGESVVVVES 97 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~vet 97 (479)
++.|++||.|++||+|+.+-.
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G~ 270 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTGI 270 (334)
T ss_dssp SCCCCTTCEECTTSEEEECBC
T ss_pred cccCCCcCEECCCCEEEeecC
Confidence 456888888888888887653
No 182
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=24.94 E-value=53 Score=33.54 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=26.2
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcC
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVEN 473 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le~ 473 (479)
.-|-+++||-++||+-...|+++|.++...
T Consensus 214 ~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~ 243 (520)
T 2jgp_A 214 YVLFTDMHHSISDGVSSGILLAEWVQLYQG 243 (520)
T ss_dssp EEEEEEEBGGGCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEccceeecHhHHHHHHHHHHHHHcc
Confidence 346789999999999999999999988754
No 183
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=24.90 E-value=40 Score=28.97 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=23.9
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHH
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEK 222 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~ 222 (479)
...|.+.+.++++|||++... .-.|+.+|+..
T Consensus 50 ~~~p~a~~~l~e~Gid~~~~~----ar~l~~~~~~~ 81 (150)
T 2wmy_A 50 TADESAIRVAEKNGLCLKGHR----GTKFTSALARQ 81 (150)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHTT
T ss_pred CCCHHHHHHHHHcCCCccCCc----ccCCCHHHhcc
Confidence 578999999999999996432 23477777643
No 184
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=24.81 E-value=35 Score=30.84 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=22.2
Q ss_pred EEecCCCCCCCceEEEEEEEcCCCCeecCCCeEEEEE
Q 011684 60 EIFMPALSSTMTEGKIVSWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 60 ~i~~P~l~~~~~eg~i~~w~v~~Gd~V~~g~~l~~ve 96 (479)
.+.|| .+. .+.|++||+|+.||+|+.+-
T Consensus 159 ~Y~LP-~ga--------~i~v~dG~~V~~GdvLArip 186 (190)
T 2auk_A 159 QYFLP-GKA--------IVQLEDGVQISSGDTLARIP 186 (190)
T ss_dssp EEECC-TTC--------EESSCTTCEECTTCEEEEEE
T ss_pred EEECC-CCC--------EEEEcCCCEEcCCCEEEEcc
Confidence 56777 342 55699999999999999885
No 185
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=24.69 E-value=33 Score=28.94 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=24.3
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+.++++++|||++... .-.|+..|+..+
T Consensus 44 ~~~~~a~~~l~e~Gid~s~~~----sr~l~~~~~~~~ 76 (134)
T 2l17_A 44 RVHPTAIAMMEEVGIDISGQT----SDPIENFNADDY 76 (134)
T ss_dssp SCCHHHHHHHHTTTCCCSSCC----CCCGGGCCGGGC
T ss_pred CCCHHHHHHHHHcCCCcccCc----cccCChHHhccC
Confidence 578999999999999996432 224777776544
No 186
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=24.55 E-value=50 Score=27.83 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=25.8
Q ss_pred EEcCCCeEEEEEec-CCCCeecCCCeEEEEecCh
Q 011684 104 VETFYDGILAAIVV-PEGESAPVGAAIGILAETE 136 (479)
Q Consensus 104 v~ap~~G~v~~i~~-~~g~~v~~G~~l~~i~~~~ 136 (479)
+..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 30 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 63 (128)
T 1onl_A 30 YAQDALGDVVYVELPEVGRVVEKGEAVAVVESVK 63 (128)
T ss_dssp HHHHHHCSEEEEECBCTTCEECTTCEEEEEEESS
T ss_pred HHhhcCCCceEEEecCCCCEEeCCCEEEEEEEcc
Confidence 34455677777776 8999999999999997543
No 187
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=24.25 E-value=43 Score=28.31 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=24.7
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+.+.++++|||++.-. .-.|+..|++.+
T Consensus 43 ~~~p~a~~~l~~~Gid~s~~~----sr~l~~~~~~~~ 75 (139)
T 1jl3_A 43 GLNPNAVKAMKEVGIDISNQT----SDIIDSDILNNA 75 (139)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHTTC
T ss_pred CCCHHHHHHHHHcCCCcccCc----cCcCCHHHhhcC
Confidence 478999999999999996422 235788887543
No 188
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=24.22 E-value=51 Score=27.77 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=25.9
Q ss_pred EEcCCCeEEEEEec-CCCCeecCCCeEEEEecCh
Q 011684 104 VETFYDGILAAIVV-PEGESAPVGAAIGILAETE 136 (479)
Q Consensus 104 v~ap~~G~v~~i~~-~~g~~v~~G~~l~~i~~~~ 136 (479)
+..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 31 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 64 (128)
T 3a7l_A 31 HAQELLGDMVFVDLPEVGATVSAGDDCAVAESVK 64 (128)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred HHhccCCceEEEEecCCCCEEeCCCEEEEEEecc
Confidence 34455677877776 8999999999999997543
No 189
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=24.20 E-value=46 Score=28.98 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=25.4
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+.++++++|||++ -.. -.|+.+|+..+
T Consensus 53 ~~~p~a~~~l~e~Gid~s-~~a----r~l~~~~~~~~ 84 (161)
T 2cwd_A 53 PMDPRARRVLEEEGAYFP-HVA----RRLTREDVLAY 84 (161)
T ss_dssp CCCHHHHHHHHHHTCCCC-CCC----CBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCcCcc-ccc----cCCCHhHhccC
Confidence 588999999999999997 432 36888888654
No 190
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=24.09 E-value=17 Score=42.33 Aligned_cols=20 Identities=15% Similarity=0.253 Sum_probs=17.3
Q ss_pred EEEcCCCCeecCCCeEEEEE
Q 011684 77 SWIKSEGDVLSKGESVVVVE 96 (479)
Q Consensus 77 ~w~v~~Gd~V~~g~~l~~ve 96 (479)
-+.|++||+|+.||+|+.|=
T Consensus 1106 ~~~v~~g~~v~~g~vlakip 1125 (1407)
T 3lu0_D 1106 IVQLEDGVQISSGDTLARIP 1125 (1407)
T ss_dssp CCCCCSSCEECTTCEEECCC
T ss_pred EEEecCCCEeccCceEEecc
Confidence 35789999999999999764
No 191
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=22.66 E-value=43 Score=28.60 Aligned_cols=33 Identities=27% Similarity=0.301 Sum_probs=24.5
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
...|.+.+.++++|||++.... -.|+.+|+..+
T Consensus 48 ~~~p~a~~~l~e~Gid~s~~~s----r~l~~~~~~~~ 80 (146)
T 1p8a_A 48 SPDTRSQKVCKSNGVDISKQRA----RQITKADFSKF 80 (146)
T ss_dssp SCTHHHHHHHHHHSCCCCCCCC----CCCCSHHHHSC
T ss_pred CCCHHHHHHHHHcCCChhcCee----ccCCHhHhhcC
Confidence 5889999999999999964322 24777777543
No 192
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=22.44 E-value=17 Score=35.99 Aligned_cols=35 Identities=6% Similarity=-0.045 Sum_probs=24.2
Q ss_pred EcCCCCeecCCCeEEEEEecc-----eeeEEEcCCCeEEE
Q 011684 79 IKSEGDVLSKGESVVVVESDK-----ADMDVETFYDGILA 113 (479)
Q Consensus 79 ~v~~Gd~V~~g~~l~~vet~K-----~~~~v~ap~~G~v~ 113 (479)
.++.|+.|++||+|+++-... ..-+|.+|.+|+|.
T Consensus 278 ~~~~g~~V~~G~~La~i~d~~~~~g~~~~~i~aP~~Gvv~ 317 (341)
T 1yw4_A 278 SVENFTLLPDGMLIAEDGAVRYQATGGEERILFPNPAVKP 317 (341)
T ss_dssp TCCBTEECCSSCCCC--------CCSSCCEEESCCTTCCS
T ss_pred cCCCcCEeCCCCEEEEECCCceEeCCCceEEEeCCCCcee
Confidence 458999999999999876432 34569999999873
No 193
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=22.26 E-value=83 Score=32.91 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=28.6
Q ss_pred EEEEEEecccccchHHHHHHHHHHHHHhcCC
Q 011684 444 MLVNVTADHRIIYGADLAAFLQTFSKIVENP 474 (479)
Q Consensus 444 m~lslt~DHRvvDG~~aa~Fl~~l~~~le~p 474 (479)
+.|-|.++|-++||.-+-.|+++|-+.|.++
T Consensus 178 ~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~ 208 (519)
T 3fot_A 178 VEILFHSNHLFWDGIGCRKFVGDLFRLVGSY 208 (519)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHTTS
T ss_pred EEEEEEeCceeEchHhHHHHHHHHHHHHHhh
Confidence 6678999999999999999999999999865
No 194
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=21.87 E-value=58 Score=29.16 Aligned_cols=32 Identities=34% Similarity=0.373 Sum_probs=25.5
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHHh
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEKA 223 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 223 (479)
.+.|.++++++++|||++ -.. -.|+.+|++.+
T Consensus 80 ~~dp~a~~vl~e~Gidis-hra----r~lt~~d~~~~ 111 (184)
T 4etn_A 80 KATPHAVEALFEKHIALN-HVS----SPLTEELMESA 111 (184)
T ss_dssp BCCHHHHHHHHHTTCCCC-CBC----CBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCch-hcc----CcCCHHHcCCC
Confidence 578999999999999997 332 36888888754
No 195
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=21.60 E-value=50 Score=28.71 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=23.9
Q ss_pred ccChhHHHHHhhcCCCccccccCCCCCccchhhHHH
Q 011684 187 VATPYAKKLLKQHKVDINSVVGTGPFGRITPEDVEK 222 (479)
Q Consensus 187 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~ 222 (479)
...|.+.+.++++|||++ -. .-.|+.+|++.
T Consensus 57 ~~~p~a~~~l~~~Gid~s-~~----ar~l~~~~~~~ 87 (161)
T 1d1q_A 57 SPDHRTVSICKQHGVKIN-HK----GKQIKTKHFDE 87 (161)
T ss_dssp CCCHHHHHHHHHTTCCCC-CC----BCBCCGGGGGT
T ss_pred CCCHHHHHHHHHcCcCCC-ce----EeECCHHHHhh
Confidence 578999999999999997 32 23577777754
No 196
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=20.09 E-value=66 Score=32.07 Aligned_cols=61 Identities=10% Similarity=0.128 Sum_probs=38.9
Q ss_pred CceeccchhhHHHHHHhhhccCccEEEEEEEEeccHHHHHHHHhCCCCCCHHHHHHHHHHHHHhhCccccccccC
Q 011684 258 STVVPFTTMQAAVSKNMIESLSVPTFRVGYPIITDALDALYEKVKPKGVTMTALLAKAAAMALVQHPVVNASCKD 332 (479)
Q Consensus 258 ~~~~p~s~~r~~ia~~m~~S~~vP~~~~~~~iDvt~l~~~~~~~k~~~~s~~~~likAva~Al~~~P~~n~~~~~ 332 (479)
....|++.+|+.+...+. ...++|.+..-+.+.. .+.. ..+-.|+...+.+||.||.++..
T Consensus 15 ~~~~pls~~Q~~~~~~~~--~~~~~y~~~~~~~l~g-----------~ld~-~~L~~Al~~lv~rh~~LRt~f~~ 75 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNF--TNTGHWNQSSVLYRPE-----------GFDP-KVIQSVMDKIIEHHDALRMVYQH 75 (466)
T ss_dssp CEECCCCHHHHHHHHTTC--TTTTCBEEEEEEEETT-----------CCCH-HHHHHHHHHHHHHSGGGGEEEEC
T ss_pred CCCCCCCHHHHHHHhCCC--CCcCcceeEEEEEcCC-----------CCCH-HHHHHHHHHHHHhChHhheEEec
Confidence 456899999984433322 3344555555555432 2222 34667888999999999998863
Done!