Query 011685
Match_columns 479
No_of_seqs 260 out of 829
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 04:06:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011685.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011685hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 3.6E-57 7.9E-62 481.5 22.3 347 90-447 70-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 1.9E-54 4.1E-59 433.4 19.2 290 90-403 2-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 3.6E-26 7.9E-31 237.2 12.8 267 152-442 222-526 (907)
4 KOG1022 Acetylglucosaminyltran 99.7 2.4E-16 5.2E-21 164.2 13.2 256 134-422 119-390 (691)
5 cd03820 GT1_amsD_like This fam 96.0 0.064 1.4E-06 52.4 11.1 95 326-425 244-340 (348)
6 cd03801 GT1_YqgM_like This fam 95.9 0.034 7.3E-07 54.4 8.4 94 326-425 267-363 (374)
7 cd03814 GT1_like_2 This family 95.7 0.015 3.1E-07 58.0 5.0 95 325-425 257-353 (364)
8 PF00852 Glyco_transf_10: Glyc 95.5 0.021 4.5E-07 59.6 5.5 151 255-426 142-310 (349)
9 cd03822 GT1_ecORF704_like This 95.0 0.033 7.2E-07 55.5 5.0 93 326-425 259-355 (366)
10 TIGR03088 stp2 sugar transfera 94.8 0.13 2.7E-06 52.8 8.8 94 327-426 265-361 (374)
11 PRK15427 colanic acid biosynth 94.7 0.16 3.6E-06 53.6 9.8 93 326-425 290-393 (406)
12 cd03818 GT1_ExpC_like This fam 94.6 0.26 5.7E-06 51.3 10.8 95 326-425 292-388 (396)
13 cd03799 GT1_amsK_like This is 94.4 0.33 7.2E-06 48.5 10.8 94 326-425 247-349 (355)
14 cd03794 GT1_wbuB_like This fam 94.4 0.064 1.4E-06 53.2 5.4 94 326-425 286-387 (394)
15 PLN02871 UDP-sulfoquinovose:DA 94.3 0.23 5E-06 53.2 9.8 95 326-426 323-422 (465)
16 PF00534 Glycos_transf_1: Glyc 94.1 0.031 6.6E-07 50.8 2.3 86 325-416 83-170 (172)
17 cd03819 GT1_WavL_like This fam 94.0 0.081 1.8E-06 53.1 5.2 94 326-425 255-353 (355)
18 cd03823 GT1_ExpE7_like This fa 93.8 0.45 9.8E-06 47.0 10.1 87 326-418 254-343 (359)
19 TIGR03449 mycothiol_MshA UDP-N 93.7 0.13 2.8E-06 53.5 6.2 105 326-435 294-399 (405)
20 cd05844 GT1_like_7 Glycosyltra 93.6 0.63 1.4E-05 47.1 11.1 94 326-425 256-358 (367)
21 cd04962 GT1_like_5 This family 93.6 0.094 2E-06 53.2 5.0 93 327-425 263-358 (371)
22 cd03811 GT1_WabH_like This fam 93.6 0.75 1.6E-05 44.8 11.2 92 328-422 257-351 (353)
23 cd03806 GT1_ALG11_like This fa 93.5 0.6 1.3E-05 49.6 11.1 135 282-425 273-414 (419)
24 cd03825 GT1_wcfI_like This fam 93.4 0.14 3E-06 51.5 5.7 96 325-425 255-352 (365)
25 cd03798 GT1_wlbH_like This fam 93.3 0.049 1.1E-06 53.6 2.2 95 326-426 270-365 (377)
26 cd03821 GT1_Bme6_like This fam 93.3 0.42 9.1E-06 47.2 8.9 92 326-425 273-367 (375)
27 cd03808 GT1_cap1E_like This fa 93.0 0.16 3.4E-06 49.8 5.3 93 327-425 256-351 (359)
28 TIGR02149 glgA_Coryne glycogen 92.9 0.2 4.2E-06 51.5 6.0 98 326-426 272-375 (388)
29 cd03800 GT1_Sucrose_synthase T 92.7 0.16 3.5E-06 51.9 5.0 94 326-425 294-390 (398)
30 PHA01630 putative group 1 glyc 92.6 0.87 1.9E-05 47.0 10.4 41 326-367 201-241 (331)
31 cd03807 GT1_WbnK_like This fam 92.6 0.11 2.4E-06 51.2 3.6 92 327-426 261-355 (365)
32 PRK09814 beta-1,6-galactofuran 92.4 0.14 3E-06 52.6 4.1 89 326-423 218-317 (333)
33 PRK10307 putative glycosyl tra 92.4 0.51 1.1E-05 49.4 8.4 96 325-426 294-396 (412)
34 cd03809 GT1_mtfB_like This fam 92.2 0.19 4E-06 50.1 4.7 92 326-425 264-357 (365)
35 PRK15484 lipopolysaccharide 1, 91.8 1.1 2.5E-05 46.7 10.3 95 326-426 268-366 (380)
36 cd03817 GT1_UGDG_like This fam 91.7 0.71 1.5E-05 45.7 8.3 90 326-422 270-361 (374)
37 PLN02949 transferase, transfer 91.5 0.79 1.7E-05 49.6 8.9 97 326-426 346-445 (463)
38 cd04949 GT1_gtfA_like This fam 90.9 0.9 1.9E-05 46.4 8.3 95 327-425 271-366 (372)
39 cd03792 GT1_Trehalose_phosphor 90.5 1.5 3.2E-05 45.2 9.5 94 326-425 265-359 (372)
40 cd03795 GT1_like_4 This family 90.1 2.2 4.7E-05 42.6 10.1 94 326-425 255-354 (357)
41 cd04955 GT1_like_6 This family 89.7 2.5 5.4E-05 42.4 10.2 91 326-425 259-352 (363)
42 TIGR02095 glgA glycogen/starch 89.7 1.2 2.7E-05 47.7 8.4 96 327-426 358-461 (473)
43 TIGR03087 stp1 sugar transfera 89.6 0.44 9.5E-06 49.7 4.8 92 327-426 290-385 (397)
44 PRK14098 glycogen synthase; Pr 89.0 2 4.4E-05 46.8 9.5 103 327-436 374-484 (489)
45 PRK00654 glgA glycogen synthas 88.9 2.1 4.6E-05 46.0 9.6 101 328-435 350-460 (466)
46 PRK14099 glycogen synthase; Pr 88.2 2.9 6.3E-05 45.5 10.1 105 327-438 361-479 (485)
47 cd03805 GT1_ALG2_like This fam 87.5 1.1 2.3E-05 46.1 5.9 93 327-425 292-386 (392)
48 cd04951 GT1_WbdM_like This fam 87.4 0.82 1.8E-05 45.7 4.9 91 327-425 255-348 (360)
49 PF13524 Glyco_trans_1_2: Glyc 87.3 0.84 1.8E-05 37.4 4.1 72 347-425 11-84 (92)
50 cd03816 GT1_ALG1_like This fam 86.3 3.6 7.9E-05 43.4 9.3 122 283-419 270-399 (415)
51 PRK09922 UDP-D-galactose:(gluc 85.9 2.2 4.8E-05 43.8 7.3 90 327-418 250-340 (359)
52 cd03804 GT1_wbaZ_like This fam 85.2 0.89 1.9E-05 46.1 3.8 62 325-390 252-313 (351)
53 cd03802 GT1_AviGT4_like This f 83.1 1.3 2.8E-05 43.9 4.0 43 326-369 235-278 (335)
54 TIGR02472 sucr_P_syn_N sucrose 83.1 1.4 3E-05 46.9 4.4 86 336-426 342-429 (439)
55 TIGR02918 accessory Sec system 82.2 4.2 9.2E-05 44.5 7.8 93 328-425 386-487 (500)
56 cd03796 GT1_PIG-A_like This fa 82.1 1.4 2.9E-05 46.1 3.8 107 326-438 261-368 (398)
57 cd03813 GT1_like_3 This family 79.5 3.3 7.1E-05 44.7 5.8 94 327-425 363-464 (475)
58 PF13692 Glyco_trans_1_4: Glyc 79.4 0.7 1.5E-05 40.0 0.5 56 326-385 62-118 (135)
59 PRK15490 Vi polysaccharide bio 78.4 9.7 0.00021 42.4 8.9 97 327-426 465-564 (578)
60 cd04946 GT1_AmsK_like This fam 77.6 17 0.00036 38.3 10.3 94 327-425 301-399 (407)
61 PLN02939 transferase, transfer 76.9 10 0.00022 44.6 9.0 106 329-438 851-967 (977)
62 cd03791 GT1_Glycogen_synthase_ 76.4 9.8 0.00021 40.6 8.2 92 327-425 363-464 (476)
63 cd03812 GT1_CapH_like This fam 76.0 8 0.00017 38.7 7.1 40 327-367 259-298 (358)
64 TIGR02468 sucrsPsyn_pln sucros 72.4 6.1 0.00013 47.0 5.7 97 337-439 574-672 (1050)
65 PHA01633 putative glycosyl tra 71.5 5 0.00011 41.7 4.4 42 326-368 215-256 (335)
66 KOG2619 Fucosyltransferase [Ca 70.2 20 0.00043 37.9 8.4 116 278-403 193-316 (372)
67 KOG1387 Glycosyltransferase [C 66.6 31 0.00066 36.3 8.6 88 327-423 349-444 (465)
68 PLN02316 synthase/transferase 66.6 9.2 0.0002 45.5 5.6 106 330-438 915-1034(1036)
69 TIGR02470 sucr_synth sucrose s 66.4 17 0.00037 42.1 7.6 88 336-426 645-736 (784)
70 PRK05749 3-deoxy-D-manno-octul 60.2 13 0.00028 39.2 4.9 105 327-443 312-422 (425)
71 PRK13608 diacylglycerol glucos 59.7 29 0.00062 36.4 7.4 84 327-422 266-356 (391)
72 PF03128 CXCXC: CXCXC repeat; 57.3 4.3 9.2E-05 22.4 0.3 12 459-470 3-14 (14)
73 cd03793 GT1_Glycogen_synthase_ 56.6 15 0.00033 41.0 4.8 100 326-426 466-575 (590)
74 TIGR01133 murG undecaprenyldip 56.3 13 0.00028 37.5 3.9 84 327-417 243-334 (348)
75 cd04950 GT1_like_1 Glycosyltra 56.2 7.6 0.00016 40.3 2.3 40 326-366 265-309 (373)
76 PRK10125 putative glycosyl tra 55.2 29 0.00062 36.8 6.5 62 325-390 297-358 (405)
77 PLN00142 sucrose synthase 54.3 33 0.00071 40.0 7.1 88 336-426 668-759 (815)
78 TIGR00236 wecB UDP-N-acetylglu 52.5 1E+02 0.0022 31.6 10.0 119 298-440 242-363 (365)
79 COG0438 RfaG Glycosyltransfera 47.0 25 0.00054 33.3 4.2 41 327-368 269-309 (381)
80 PRK15179 Vi polysaccharide bio 45.9 74 0.0016 36.5 8.2 93 328-425 585-681 (694)
81 PRK00726 murG undecaprenyldiph 37.5 46 0.001 33.8 4.6 85 327-418 245-338 (357)
82 cd01635 Glycosyltransferase_GT 36.8 40 0.00087 30.6 3.7 41 326-367 173-213 (229)
83 PLN02275 transferase, transfer 36.2 1.2E+02 0.0026 31.3 7.5 75 282-367 261-341 (371)
84 PLN02605 monogalactosyldiacylg 35.8 54 0.0012 34.1 4.9 79 327-418 275-362 (382)
85 smart00672 CAP10 Putative lipo 34.9 1.4E+02 0.003 29.9 7.3 150 279-438 81-246 (256)
86 PRK14750 kdpF potassium-transp 30.3 75 0.0016 21.1 3.0 22 41-62 5-26 (29)
87 cd03788 GT1_TPS Trehalose-6-Ph 28.7 54 0.0012 35.4 3.5 92 325-422 351-446 (460)
88 TIGR02400 trehalose_OtsA alpha 26.0 1.2E+02 0.0026 32.9 5.5 86 325-418 346-437 (456)
89 TIGR03590 PseG pseudaminic aci 25.2 1.3E+02 0.0028 30.1 5.3 34 326-365 233-266 (279)
90 PRK00025 lpxB lipid-A-disaccha 22.2 1.1E+02 0.0025 31.2 4.4 102 328-440 255-373 (380)
91 KOG3185 Translation initiation 21.3 64 0.0014 31.0 2.0 31 334-364 20-50 (245)
92 PF08630 Dfp1_Him1_M: Dfp1/Him 21.2 32 0.00069 30.8 0.0 27 88-114 74-100 (125)
93 PF15168 TRIQK: Triple QxxK/R 20.5 1.6E+02 0.0034 24.1 3.8 33 35-67 40-76 (79)
94 cd03785 GT1_MurG MurG is an N- 20.3 1E+02 0.0022 31.0 3.4 84 326-418 244-338 (350)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=3.6e-57 Score=481.52 Aligned_cols=347 Identities=30% Similarity=0.468 Sum_probs=274.4
Q ss_pred CCCceEEEecCCcccchhHHhhccccc---------------CCCCCccccc--------CCCCCCCCccchhHHHHhhc
Q 011685 90 SSKVKVYMYNLPRKFTYGIIEQHSMAR---------------GGLVGPVADV--------SMLKYPGHQHMGEWYVFSDL 146 (479)
Q Consensus 90 ~~~~~IYVYdLP~~Fn~~ll~~c~~~~---------------~g~g~~~~~~--------~~~~~~~~q~s~e~~~~~~l 146 (479)
+.+.+||||++|+.|+.++++.|.... .+.|...... ...|+.++|++.|.+++..+
T Consensus 70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~ 149 (464)
T KOG1021|consen 70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRM 149 (464)
T ss_pred ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHH
Confidence 778999999999999999999885431 1122211110 12345568888888877665
Q ss_pred cCccccccCCCceecCCCCCCcEEEEecccccceeeccCCCCC-CCCCChHHHHHHHHHHHhhCccccccCCCceEEEcC
Q 011685 147 SRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAA-AHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAG 225 (479)
Q Consensus 147 ~~~~~~rl~s~~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~-~~~~s~~~~~~~l~~~L~~~PyW~R~gGrDHf~v~g 225 (479)
+ ...++|||.||+|||+||||||++++++.....+.. .....++.++.+++.|++++|||+|++|+|||||++
T Consensus 150 ~------~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~ 223 (464)
T KOG1021|consen 150 L------RRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVAC 223 (464)
T ss_pred h------cccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeC
Confidence 3 134569999999999999999999987544333311 111246778899999999999999999999999999
Q ss_pred CcchhhhhhHhhhceEEEeeccCC--ccccCCCcC-ceeecCCcccC-----C--CCCCCCCCCCCceEEEeecccccCC
Q 011685 226 DPNAMLRVMDRIKNAVLLVSDFGR--LRVDQGSLV-KDVVIPYSHRI-----N--TYTGDPRVDNRNTLLFFMGNRYRKE 295 (479)
Q Consensus 226 ~~~~~~~~~~~~~nai~l~~~~g~--~~~~~~~~~-kDvvIPy~~~~-----~--~~~~~~~~~~R~~L~~F~G~~~~~~ 295 (479)
|+++.+......++++.++.+++. .....+.+. +|++|||++.. . .|++.++..+|++|++|+|+. .
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~ 300 (464)
T KOG1021|consen 224 HDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---A 300 (464)
T ss_pred CcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---c
Confidence 988776654445555555555552 111223344 99999997421 1 477778889999999999985 5
Q ss_pred CchhHHHHHHHHcC----CCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCC
Q 011685 296 GGKIRDLLFNILET----EEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELP 371 (479)
Q Consensus 296 ~~~iR~~L~~~~~~----~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lP 371 (479)
++.||+.|+++|++ +.+..+..|...|.+...|++.|++|+|||||+||+++++|+||||++|||||||+|++++|
T Consensus 301 ~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lp 380 (464)
T KOG1021|consen 301 GGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLP 380 (464)
T ss_pred CCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccC
Confidence 78999999999988 33334455666677889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEEEeCCCcCCcccHHHHHccCCHHHHHHHHHHHHh-HhhcceecC--C---CchHHHHHHHHHhhcccc
Q 011685 372 FEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKK-VQRYFIYDH--P---NGAVNEIWREVSQKLPLI 445 (479)
Q Consensus 372 F~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~--p---~~a~~~il~~l~~rlp~i 445 (479)
|++++||++|||+|+++++.+. |.++|.+|+.+++.+||+++++ +.++|.+.. + +|||++++.++..|+...
T Consensus 381 f~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~ 458 (464)
T KOG1021|consen 381 FGDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKL 458 (464)
T ss_pred cCCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccc
Confidence 9999999999999998887762 5999999999999999999995 799999986 3 689999999999998766
Q ss_pred hh
Q 011685 446 KI 447 (479)
Q Consensus 446 ~~ 447 (479)
+.
T Consensus 459 ~~ 460 (464)
T KOG1021|consen 459 RS 460 (464)
T ss_pred cc
Confidence 54
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=1.9e-54 Score=433.43 Aligned_cols=290 Identities=29% Similarity=0.463 Sum_probs=219.3
Q ss_pred CCCceEEEecCCcccchhHHhhcccccCCCCCcccccCCCCCCCCccchhHHHHhhccCccccccCCCceecCCCCCCcE
Q 011685 90 SSKVKVYMYNLPRKFTYGIIEQHSMARGGLVGPVADVSMLKYPGHQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADL 169 (479)
Q Consensus 90 ~~~~~IYVYdLP~~Fn~~ll~~c~~~~~g~g~~~~~~~~~~~~~~q~s~e~~~~~~l~~~~~~rl~s~~~rT~DPeeAdl 169 (479)
++++||||||||++||.+++...... ....+.+.+++.|+++++.+. +++++|+||+|||+
T Consensus 2 ~~~lkVYVY~lp~~~~~~~~~~~~~~-----------~~~~~~~~~~~~e~~l~~~l~--------~s~~~T~dp~eAdl 62 (302)
T PF03016_consen 2 HRGLKVYVYPLPPKFNKDLLDPREDE-----------QCSWYETSQYALEVILHEALL--------NSPFRTDDPEEADL 62 (302)
T ss_pred CCCCEEEEEeCCccccccceeccccc-----------cCCCcccccchHHHHHHHHHH--------hCCcEeCCHHHCeE
Confidence 57899999999999999998321111 123444578999999987664 33499999999999
Q ss_pred EEEecccccceeeccCCCCCCCCCChHHHHHHHHHHHhhCccccccCCCceEEEcCCc-chhhh--hhHhhhceEEEeec
Q 011685 170 FFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIAGDP-NAMLR--VMDRIKNAVLLVSD 246 (479)
Q Consensus 170 FyVP~y~~l~~~~~~~~~~~~~~~s~~~~~~~l~~~L~~~PyW~R~gGrDHf~v~g~~-~~~~~--~~~~~~nai~l~~~ 246 (479)
||||+|.++......+.... ....+.+...+.++++++|||||++|+||||++++. |.+.. ......+.+.++..
T Consensus 63 F~vP~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 140 (302)
T PF03016_consen 63 FFVPFYSSCYFHHWWGSPNS--GADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVA 140 (302)
T ss_pred EEEEcccccccccccCCccc--hhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheec
Confidence 99999998763100011110 012445667777888999999999999999998665 33321 11223333333333
Q ss_pred cCCccccCCCcCceeecCCcccCCC---CC--CCCCCCCCceEEEeecccccC---CCchhHHHHHHHHcCCCcEEEecC
Q 011685 247 FGRLRVDQGSLVKDVVIPYSHRINT---YT--GDPRVDNRNTLLFFMGNRYRK---EGGKIRDLLFNILETEEDVVIKHG 318 (479)
Q Consensus 247 ~g~~~~~~~~~~kDvvIPy~~~~~~---~~--~~~~~~~R~~L~~F~G~~~~~---~~~~iR~~L~~~~~~~~d~~i~~g 318 (479)
.+.+...++++++||++|+...... +. ......+|++|++|+|+.... .++.+|+.|.+.|++.++..+..+
T Consensus 141 ~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~ 220 (302)
T PF03016_consen 141 FSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCSDG 220 (302)
T ss_pred cCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceeeec
Confidence 4445567889999999998643322 22 123468999999999998765 356999999999988887765433
Q ss_pred ccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHH
Q 011685 319 TQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLIS 398 (479)
Q Consensus 319 ~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~ 398 (479)
...+.+..+|.+.|++|+|||+|+|+++++.||+|||++|||||||+|+++|||+++|||++|||+|+++++++ |++
T Consensus 221 ~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~---l~~ 297 (302)
T PF03016_consen 221 SETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPE---LPE 297 (302)
T ss_pred ccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHH---HHH
Confidence 33344566799999999999999999999999999999999999999999999999999999999999999976 999
Q ss_pred HHccC
Q 011685 399 TLRAV 403 (479)
Q Consensus 399 iL~~I 403 (479)
+|++|
T Consensus 298 iL~~i 302 (302)
T PF03016_consen 298 ILRSI 302 (302)
T ss_pred HHhcC
Confidence 99986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-26 Score=237.23 Aligned_cols=267 Identities=22% Similarity=0.291 Sum_probs=189.1
Q ss_pred cccCCCceecCCCCCCcEEEEecccccceeeccCCCCCCCCCChHHHHHHHHHHHhhCccccccCCCceEEEc-CCcchh
Q 011685 152 ERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWRRNNGRDHVIIA-GDPNAM 230 (479)
Q Consensus 152 ~rl~s~~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~~~~s~~~~~~~l~~~L~~~PyW~R~gGrDHf~v~-g~~~~~ 230 (479)
+.+....+.|+||+.||++.+-+-. ...|. ..... ++ +-|-+.|||+ ++|+||++++ +++...
T Consensus 222 ~t~~~n~~~ve~pd~ACiyi~lvge-------~q~P~---~l~p~----el-eklyslp~w~-~dg~Nhvl~Nl~r~s~~ 285 (907)
T KOG2264|consen 222 ETIPNNVYLVETPDKACIYIHLVGE-------IQSPV---VLTPA----EL-EKLYSLPHWR-TDGFNHVLFNLGRPSDT 285 (907)
T ss_pred HhcccceeEeeCCCccEEEEEEecc-------ccCCC---cCChH----hh-hhhhcCcccc-CCCcceEEEEccCcccc
Confidence 3456667999999999999774421 11111 01111 22 2377899995 8999999997 543211
Q ss_pred hh--hhHhhhceEEEeeccCCccccCCCcCceeecCCc-c--cCCCCCCC--CCCCCCceEEEeecccccCCCc--hhHH
Q 011685 231 LR--VMDRIKNAVLLVSDFGRLRVDQGSLVKDVVIPYS-H--RINTYTGD--PRVDNRNTLLFFMGNRYRKEGG--KIRD 301 (479)
Q Consensus 231 ~~--~~~~~~nai~l~~~~g~~~~~~~~~~kDvvIPy~-~--~~~~~~~~--~~~~~R~~L~~F~G~~~~~~~~--~iR~ 301 (479)
-. .....+.||.+.+.|. ..++++++|+++|.. | .-..|+.. .-+.+|+||+.|+|.+..+.++ ..+.
T Consensus 286 ~n~lyn~~t~raivvQssf~---~~q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~a 362 (907)
T KOG2264|consen 286 QNLLYNFQTGRAIVVQSSFY---TVQIRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSA 362 (907)
T ss_pred ccceeEeccCceEEEeecce---eeeeccCCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhh
Confidence 10 1124567888777775 457899999999743 3 23456643 3478999999999988654322 1333
Q ss_pred HHHHHHcCCC-----c--E---EEec-----------CccCcccHhHHhhccCCCcEEEe-cCCCCCC-----cchHHHH
Q 011685 302 LLFNILETEE-----D--V---VIKH-----------GTQSRESRRAATQGMHTSKFCLN-PAGDTPS-----ACRLFDA 354 (479)
Q Consensus 302 ~L~~~~~~~~-----d--~---~i~~-----------g~~~~~~~~~y~~~l~~S~FCL~-P~Gds~t-----s~Rl~DA 354 (479)
...++..+.+ | + .+.. .+..|+....-.+++..|+|||. |+||+-- -.|++||
T Consensus 363 F~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~ea 442 (907)
T KOG2264|consen 363 FSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEA 442 (907)
T ss_pred hHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHH
Confidence 2222221110 1 1 1211 11224455667899999999997 8898632 3689999
Q ss_pred HHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCCHHHHHHHHHHHHhH-hhcceecCCCchHHH
Q 011685 355 IVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKV-QRYFIYDHPNGAVNE 433 (479)
Q Consensus 355 i~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~e~i~~Mr~~l~~v-~~~f~Y~~p~~a~~~ 433 (479)
+..||||||+++...|||.+.|||++.++.+|..++.+ ++.+|+++...++.+||++++.+ ..||+ +-...+++
T Consensus 443 L~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE---~HFllrs~~dsDll~mRRqGRl~wEtYls--~~~~~~~t 517 (907)
T KOG2264|consen 443 LQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTE---AHFLLRSFEDSDLLEMRRQGRLFWETYLS--DRHLLART 517 (907)
T ss_pred HhcCCeeEEeccccccchHHHHHHHHHhhhCCccccch---HHHHHHhcchhhHHHHHhhhhhhHHHHhh--HHHHHHHH
Confidence 99999999999999999999999999999999999887 89999999999999999999998 55554 33467899
Q ss_pred HHHHHHhhc
Q 011685 434 IWREVSQKL 442 (479)
Q Consensus 434 il~~l~~rl 442 (479)
++++|+.|+
T Consensus 518 vlA~lR~rl 526 (907)
T KOG2264|consen 518 VLAALRYRL 526 (907)
T ss_pred HHHHHHHhh
Confidence 999999987
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.68 E-value=2.4e-16 Score=164.23 Aligned_cols=256 Identities=20% Similarity=0.156 Sum_probs=176.8
Q ss_pred CccchhHHHHhhccCccccccCCCceecCCCCCCcEEEEecccccceeeccCCCCCCCCCChHHHHHHHHHHHhhCcccc
Q 011685 134 HQHMGEWYVFSDLSRPESERVGSPVVKVTDPGEADLFFVPVFSSLSLVVNVGGPAAAHRYSDEEMQEELVEWLEQQEYWR 213 (479)
Q Consensus 134 ~q~s~e~~~~~~l~~~~~~rl~s~~~rT~DPeeAdlFyVP~y~~l~~~~~~~~~~~~~~~s~~~~~~~l~~~L~~~PyW~ 213 (479)
...+.|+...++.. .+|- +.|.|+++||+| +|-..-+. .|+. + -++ ....|++.-.|
T Consensus 119 ~T~s~ey~~lleA~------~~S~-yyt~n~N~aclf-~Ps~d~ln--Qn~l--------~-~kl---~~~ala~l~~w- 175 (691)
T KOG1022|consen 119 ATWSPEYIALLEAW------HLSF-YYTFNYNGACLF-MPSSDELN--QNPL--------S-WKL---EKVALAKLLVW- 175 (691)
T ss_pred ccccHHHHHHHHHH------Hhcc-ceecCCCceEEE-ecchhhhc--cCcc--------h-HHH---HHHHHhcccch-
Confidence 55678887665543 2343 899999999999 88865432 3321 1 111 12346778899
Q ss_pred ccCCCceEEEc---CCcchhhhhhH-hhhceEEEeeccCCccccCCCcCceeecCCcccCCCCCCCCCCCCCceEEEeec
Q 011685 214 RNNGRDHVIIA---GDPNAMLRVMD-RIKNAVLLVSDFGRLRVDQGSLVKDVVIPYSHRINTYTGDPRVDNRNTLLFFMG 289 (479)
Q Consensus 214 R~gGrDHf~v~---g~~~~~~~~~~-~~~nai~l~~~~g~~~~~~~~~~kDvvIPy~~~~~~~~~~~~~~~R~~L~~F~G 289 (479)
..|.+|..++ |.+...+...+ ...++.+....||.|. ++.++||.||.......-+....+..|.+++--.|
T Consensus 176 -drg~nH~~fnmLpGg~p~yntaldv~~d~a~~~gggf~tW~---yr~g~dv~ipv~Sp~~v~~~~~~~g~r~~~l~~~q 251 (691)
T KOG1022|consen 176 -DRGVNHEGFNMLPGGDPTYNTALDVGQDEAWYSGGGFGTWK---YRKGNDVYIPVRSPGNVGRAFLYDGSRYRVLQDCQ 251 (691)
T ss_pred -hcccceeeEeeccCCCCCccccccCCcceeEEecCCcCccc---ccCCCccccccccccccCccccCCccceeeeeccc
Confidence 4699999985 33333333333 2346777777787544 67889999997543321111223456665544333
Q ss_pred ccccCCCchhHHHHHHHHcCCCcEEEecC-----------ccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhc
Q 011685 290 NRYRKEGGKIRDLLFNILETEEDVVIKHG-----------TQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSL 358 (479)
Q Consensus 290 ~~~~~~~~~iR~~L~~~~~~~~d~~i~~g-----------~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aG 358 (479)
- +++..+|..|.+++.+...-.+..+ .+..+...+|...+...+||+.-+|.+-...-+.+-+.+|
T Consensus 252 ~---n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~ 328 (691)
T KOG1022|consen 252 E---NYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYAS 328 (691)
T ss_pred c---ccchHhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcc
Confidence 2 3456788888887655433222111 1111223468999999999999888888888999999999
Q ss_pred ceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCCHHHHHHHHHHHHhH-hhcc
Q 011685 359 CVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTPDRILEYQRELKKV-QRYF 422 (479)
Q Consensus 359 CIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~e~i~~Mr~~l~~v-~~~f 422 (479)
|||||..|.+.+||++++||...||.++|..+.+ +.+.|.+|+...+.+||.+.... ..+|
T Consensus 329 c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~---v~~~l~~i~~~~i~sl~~r~~~~rl~rf 390 (691)
T KOG1022|consen 329 CAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGK---VMDALLNIETAGICSLQLRRIGSRLNRF 390 (691)
T ss_pred cceeeeeehhhhhhhhhhhceeeeEEeehhhHHH---HHHHhhcchhcchhhhhhhhhhhhHhhc
Confidence 9999999999999999999999999999988765 99999999999999999988775 3444
No 5
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.02 E-value=0.064 Score=52.38 Aligned_cols=95 Identities=12% Similarity=0.073 Sum_probs=63.3
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.|+++.+++.|.........++|||.+||. ||.++....+ +++++-....+.++..++.+ +.+.+..+
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~~i~~ll~ 318 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEA---LAEALLRLME 318 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 45678899999999997655456789999999995 5556533222 22333334566666655432 44444443
Q ss_pred CHHHHHHHHHHHHhHhhcceec
Q 011685 404 TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.++...+|.++.+...+.|.|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 319 DEELRKRMGANARESAERFSIE 340 (348)
T ss_pred CHHHHHHHHHHHHHHHHHhCHH
Confidence 6788889999887777777664
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.87 E-value=0.034 Score=54.43 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=66.4
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.++.+.|..|.+.++|.-.......++||+.+|| |||.++.- .+.+.+......+.++..+.. .+.+.|..+
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~--~~~~~~~~~~~g~~~~~~~~~---~l~~~i~~~~~ 340 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVG--GIPEVVEDGETGLLVPPGDPE---ALAEAILRLLD 340 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCC--ChhHHhcCCcceEEeCCCCHH---HHHHHHHHHHc
Confidence 5678899999999998765556678999999998 67777652 344555556667777766533 255555543
Q ss_pred CHHHHHHHHHHHH-hHhhcceec
Q 011685 404 TPDRILEYQRELK-KVQRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~-~v~~~f~Y~ 425 (479)
.++...+|.++.+ .+.+.+.|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSWD 363 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCHH
Confidence 5677888888887 457777764
No 7
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.65 E-value=0.015 Score=57.97 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=64.9
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC-
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV- 403 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I- 403 (479)
..+..+.|..|.+++.|.+.......++|||.+|| |||.++.-. ..+.+.-....+.++..+..+ +.+.+..+
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~---l~~~i~~l~ 330 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEA---FAAALAALL 330 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHH---HHHHHHHHH
Confidence 34677899999999999877666778999999999 788877442 223343334555566555432 33333332
Q ss_pred -CHHHHHHHHHHHHhHhhcceec
Q 011685 404 -TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 -s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.+++..+|.++.......+.|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 331 ADPELRRRMAARARAEAERRSWE 353 (364)
T ss_pred cCHHHHHHHHHHHHHHHhhcCHH
Confidence 5788889998888876677664
No 8
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=95.47 E-value=0.021 Score=59.56 Aligned_cols=151 Identities=16% Similarity=0.146 Sum_probs=63.4
Q ss_pred CCcCceeecCCcccCC--CCCC--C--CCCCCCceEEE-eecccccCCCchhHHHHHHHHcCCCcEEEecCccC---ccc
Q 011685 255 GSLVKDVVIPYSHRIN--TYTG--D--PRVDNRNTLLF-FMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQS---RES 324 (479)
Q Consensus 255 ~~~~kDvvIPy~~~~~--~~~~--~--~~~~~R~~L~~-F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~---~~~ 324 (479)
++..-||.+||..... .... . .....++.++. ++.+. . ...-|..+++.+.+.-.+.. .|.+. ...
T Consensus 142 Yr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc-~--~~~~R~~~~~~L~~~~~vd~-yG~c~~~~~~~ 217 (349)
T PF00852_consen 142 YRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNC-N--PHSGREEYVRELSKYIPVDS-YGKCGNNNPCP 217 (349)
T ss_dssp -------------------------------TSSEEEEE--S-S-----H-HHHHHHHHHHTTS-EEE--SSTT--SSS-
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEeeCc-C--CcccHHHHHHHHHhhcCeEc-cCCCCCCCCcc
Confidence 4445799999864221 1111 1 11234444444 55543 2 22339999988877644433 45441 112
Q ss_pred HhHHhhccCCCcEEEecC---CCCCCcchHHHHHHhcceeEEee--C-Cc--cCCCCCCCCCCcEEEEEeCCCcCCcccH
Q 011685 325 RRAATQGMHTSKFCLNPA---GDTPSACRLFDAIVSLCVPVIVS--D-SI--ELPFEDVIDYRKIAVFVETSAATKPGFL 396 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~---Gds~ts~Rl~DAi~aGCIPVIis--d-~~--~lPF~~~iDw~~fSV~I~e~dv~~~~~l 396 (479)
.....+.+++-+|.|+.. -.+..+--+|+|+.+|||||+++ . ++ .+|=...|+.++|. ....|
T Consensus 218 ~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~---------s~~~L 288 (349)
T PF00852_consen 218 RDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK---------SPKEL 288 (349)
T ss_dssp -S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS---------SHHHH
T ss_pred cccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC---------CHHHH
Confidence 234788899999999854 34556778999999999999999 3 23 36656666655442 11236
Q ss_pred HHHHccCCHHHHHHHHHHHHhHhhcceecC
Q 011685 397 ISTLRAVTPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 397 ~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
.+.|+.+.. +=....+||.|..
T Consensus 289 a~yl~~l~~--------n~~~Y~~yf~Wr~ 310 (349)
T PF00852_consen 289 ADYLKYLDK--------NDELYNKYFEWRK 310 (349)
T ss_dssp HHHHHHHHT---------HHHHH-------
T ss_pred HHHHHHHhc--------CHHHHhhhccccc
Confidence 666665532 1222356777754
No 9
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=94.97 E-value=0.033 Score=55.53 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=63.6
Q ss_pred hHHhhccCCCcEEEecCCCC--CCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC
Q 011685 326 RAATQGMHTSKFCLNPAGDT--PSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds--~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I 403 (479)
.+..+.|+.+.+++.|.... ..+..+.|||.+|+ |||.+|.-. .+.+.+. .-.+.++..++.+ +.+.|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~---~~~~l~~l 331 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAA---LAEAIRRL 331 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHH---HHHHHHHH
Confidence 46788999999999997766 66678999999999 999887533 3333333 2344555555332 44444332
Q ss_pred --CHHHHHHHHHHHHhHhhcceec
Q 011685 404 --TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 --s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.+++..+|+++.+...+.|+|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWE 355 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHH
Confidence 3578889999988876657764
No 10
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=94.76 E-value=0.13 Score=52.84 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=61.6
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.|+.+.+++.|.-.......++|||.+|+ |||.+|.-. ..+++.-......++..+..+ +.+.|..+ .
T Consensus 265 ~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~~ 338 (374)
T TIGR03088 265 DVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVA---LARALQPYVSD 338 (374)
T ss_pred CHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHH---HHHHHHHHHhC
Confidence 456778888888887544445668999999996 999988533 234454455566676655432 44333332 4
Q ss_pred HHHHHHHHHHHHhH-hhcceecC
Q 011685 405 PDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
+++..+|.++.++. ...|.|..
T Consensus 339 ~~~~~~~~~~a~~~~~~~fs~~~ 361 (374)
T TIGR03088 339 PAARRAHGAAGRARAEQQFSINA 361 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHH
Confidence 66677777776654 67888754
No 11
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=94.74 E-value=0.16 Score=53.61 Aligned_cols=93 Identities=16% Similarity=0.237 Sum_probs=63.7
Q ss_pred hHHhhccCCCcEEEecCC-------CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHH
Q 011685 326 RAATQGMHTSKFCLNPAG-------DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLIS 398 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G-------ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~ 398 (479)
.+..+.++.+..++.|.= ++ ....++|||.+|+ |||.++.--.| +++.-..-.+.+++.|... +.+
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg-~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~---la~ 362 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEG-IPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQA---LAQ 362 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccC-ccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHH---HHH
Confidence 456788999998888842 23 2457999999996 99988754333 4444444566677766543 544
Q ss_pred HHccC---CHHHHHHHHHHHHhH-hhcceec
Q 011685 399 TLRAV---TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 399 iL~~I---s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
.+..+ ++++..+|.++.++. ...|.|.
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~ 393 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQQ 393 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCHH
Confidence 44433 677889999888764 7888775
No 12
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.58 E-value=0.26 Score=51.33 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=61.6
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAVT 404 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~Is 404 (479)
.++.+.|+.|..++.|.-....+..++|||++|| |||.+|.- +..+++.-..-.+.++..|..... .|.++|. .
T Consensus 292 ~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~--~ 366 (396)
T cd03818 292 DQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLD--D 366 (396)
T ss_pred HHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHh--C
Confidence 4667888888888877543334457999999999 88877653 344555544556667665533211 1334443 4
Q ss_pred HHHHHHHHHHHHhH-hhcceec
Q 011685 405 PDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
+++..+|.++.++. .++|.|.
T Consensus 367 ~~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 367 PARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccHH
Confidence 67788888887764 6677764
No 13
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.44 E-value=0.33 Score=48.46 Aligned_cols=94 Identities=11% Similarity=0.138 Sum_probs=58.4
Q ss_pred hHHhhccCCCcEEEecCCC------CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHH
Q 011685 326 RAATQGMHTSKFCLNPAGD------TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLIST 399 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gd------s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~i 399 (479)
.+..+.++++.+++.|... ......++|||.+||-. |.++.-. ..+++.=..-...+++.+..+ +.+.
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pv-i~~~~~~--~~~~i~~~~~g~~~~~~~~~~---l~~~ 320 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPV-ISTDVSG--IPELVEDGETGLLVPPGDPEA---LADA 320 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCE-EecCCCC--cchhhhCCCceEEeCCCCHHH---HHHH
Confidence 4677888999999998653 33456899999999855 4454322 233343333455565544332 4333
Q ss_pred HccC--CHHHHHHHHHHHHhH-hhcceec
Q 011685 400 LRAV--TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 400 L~~I--s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
|..+ .+++..+|.++.++. ...|.|.
T Consensus 321 i~~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 321 IERLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 3332 466788888887764 6777664
No 14
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.39 E-value=0.064 Score=53.24 Aligned_cols=94 Identities=15% Similarity=0.248 Sum_probs=62.1
Q ss_pred hHHhhccCCCcEEEecCCCCCC-----cchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHH
Q 011685 326 RAATQGMHTSKFCLNPAGDTPS-----ACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTL 400 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~t-----s~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL 400 (479)
.++.+.|..+.++++|...+.. ...++||+.+|| |||.++.-..+ +.+.-....+.++..+..+ +.+.|
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~--~~~~~~~~g~~~~~~~~~~---l~~~i 359 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA--ELVEEAGAGLVVPPGDPEA---LAAAI 359 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch--hhhccCCcceEeCCCCHHH---HHHHH
Confidence 4677889999999998765532 446899999997 88887754322 1222224455666555432 54444
Q ss_pred ccC--CHHHHHHHHHHHHhH-hhcceec
Q 011685 401 RAV--TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 401 ~~I--s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
..+ .+++..+|.++.+.. .++|.|.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 444 678888998888776 4477764
No 15
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=94.29 E-value=0.23 Score=53.23 Aligned_cols=95 Identities=13% Similarity=0.191 Sum_probs=66.7
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCC---CcEEEEEeCCCcCCcccHHHHHcc
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDY---RKIAVFVETSAATKPGFLISTLRA 402 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw---~~fSV~I~e~dv~~~~~l~~iL~~ 402 (479)
.+..+.|+.+..++.|........-++|||.+| +|||.++.-- ..++++- .+..+.++..|..+ +.+.|..
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~---la~~i~~ 396 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDD---CVEKLET 396 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 467888999999999987665667899999999 8999887532 2333432 56667777666433 4333333
Q ss_pred C--CHHHHHHHHHHHHhHhhcceecC
Q 011685 403 V--TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 403 I--s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
+ .++...+|.++.++....|.|..
T Consensus 397 ll~~~~~~~~~~~~a~~~~~~fsw~~ 422 (465)
T PLN02871 397 LLADPELRERMGAAAREEVEKWDWRA 422 (465)
T ss_pred HHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 2 57788889998888766777753
No 16
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=94.11 E-value=0.031 Score=50.75 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=51.0
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCC
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVT 404 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is 404 (479)
..++.+.++.|.+.++|......+..+.|||.+|| |||.++.-. +.+++.=..-.+.++..++.+ +.+.+..+-
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~--~~e~~~~~~~g~~~~~~~~~~---l~~~i~~~l 156 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGG--NNEIINDGVNGFLFDPNDIEE---LADAIEKLL 156 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTH--HHHHSGTTTSEEEESTTSHHH---HHHHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccC--CceeeccccceEEeCCCCHHH---HHHHHHHHH
Confidence 34678889999999999887777889999999999 666776321 122222122345555544332 444444432
Q ss_pred --HHHHHHHHHHHH
Q 011685 405 --PDRILEYQRELK 416 (479)
Q Consensus 405 --~e~i~~Mr~~l~ 416 (479)
++...+|.++.+
T Consensus 157 ~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 157 NDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 355666666554
No 17
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=93.96 E-value=0.081 Score=53.12 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=63.5
Q ss_pred hHHhhccCCCcEEEecC-CCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHH---c
Q 011685 326 RAATQGMHTSKFCLNPA-GDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTL---R 401 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~-Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL---~ 401 (479)
.+..+.|+.|...+.|. -.......++|||++|| |||.++.- ...+.+.-....+.++..+... +.+.| .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~~~ 328 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHG--GARETVRPGETGLLVPPGDAEA---LAQALDQIL 328 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCC--CcHHHHhCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 35678888999999886 22334458999999999 88877642 3345555444556666655443 44444 2
Q ss_pred cCCHHHHHHHHHHHHhH-hhcceec
Q 011685 402 AVTPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 402 ~Is~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
..++++..+|.++.++. ..+|.|.
T Consensus 329 ~~~~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 329 SLLPEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred hhCHHHHHHHHHHHHHHHHHhhhhc
Confidence 23688899999998876 7787764
No 18
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=93.76 E-value=0.45 Score=47.00 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=57.0
Q ss_pred hHHhhccCCCcEEEecCC-CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC-
Q 011685 326 RAATQGMHTSKFCLNPAG-DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G-ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I- 403 (479)
.+..+.++.+..++.|.- .......++|||.+| +|||.++.- ...+.++.....+.++..|+.+ +.+.+..+
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~---l~~~i~~l~ 327 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAED---LAAALERLI 327 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHH---HHHHHHHHH
Confidence 567888999999999963 233556899999999 677777642 2334455555567777766432 33333322
Q ss_pred -CHHHHHHHHHHHHhH
Q 011685 404 -TPDRILEYQRELKKV 418 (479)
Q Consensus 404 -s~e~i~~Mr~~l~~v 418 (479)
.++...+|+++.+..
T Consensus 328 ~~~~~~~~~~~~~~~~ 343 (359)
T cd03823 328 DDPDLLERLRAGIEPP 343 (359)
T ss_pred hChHHHHHHHHhHHHh
Confidence 567777777776554
No 19
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.65 E-value=0.13 Score=53.46 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=65.6
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAVT 404 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~Is 404 (479)
.+..+.|+.+..++.|.=.......++|||.+|| |||.++.--. .+.+.=....+.++..|..... .|.++|. .
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~d~~~la~~i~~~l~--~ 368 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL--PVAVADGETGLLVDGHDPADWADALARLLD--D 368 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc--HhhhccCCceEECCCCCHHHHHHHHHHHHh--C
Confidence 4567789999988888544344567999999996 8888774322 2334333445666655543211 1333443 4
Q ss_pred HHHHHHHHHHHHhHhhcceecCCCchHHHHH
Q 011685 405 PDRILEYQRELKKVQRYFIYDHPNGAVNEIW 435 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il 435 (479)
++...+|.++.++..+.|.|..-...+..+.
T Consensus 369 ~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y 399 (405)
T TIGR03449 369 PRTRIRMGAAAVEHAAGFSWAATADGLLSSY 399 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6778899988888767788864333333333
No 20
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.65 E-value=0.63 Score=47.07 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=60.6
Q ss_pred hHHhhccCCCcEEEecCCC------CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHH
Q 011685 326 RAATQGMHTSKFCLNPAGD------TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLIST 399 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gd------s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~i 399 (479)
.+..+.+..+...+.|.-. ......++|||.+|| |||.+|.-.. .+.+.-....+.++..+..+ +.+.
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~--~e~i~~~~~g~~~~~~d~~~---l~~~ 329 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGI--PEAVEDGETGLLVPEGDVAA---LAAA 329 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCc--hhheecCCeeEEECCCCHHH---HHHH
Confidence 4566778888888877421 113467999999997 9998886432 33344445566776655432 4433
Q ss_pred HccC--CHHHHHHHHHHHHhH-hhcceec
Q 011685 400 LRAV--TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 400 L~~I--s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
|..+ .++...+|.++.+.. .++|+|.
T Consensus 330 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 330 LGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 3332 466788888877664 6788775
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.62 E-value=0.094 Score=53.21 Aligned_cols=93 Identities=13% Similarity=0.206 Sum_probs=62.2
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.|..+..++.|.-.......+.|||.+| +|||.++.-. ..+++.-..-...++..+..+ +.+.+..+ .
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~---l~~~i~~l~~~ 336 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEA---MAEYALSLLED 336 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHH---HHHHHHHHHhC
Confidence 46778899999999874444566899999999 6888887543 234444333344555545332 33333322 5
Q ss_pred HHHHHHHHHHHHhH-hhcceec
Q 011685 405 PDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
++...+|+++.+.. ...|.|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 337 DELWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 78889999988886 7788775
No 22
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=93.60 E-value=0.75 Score=44.75 Aligned_cols=92 Identities=11% Similarity=0.145 Sum_probs=53.5
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCccc-HHHHHccC-CH
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGF-LISTLRAV-TP 405 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~-l~~iL~~I-s~ 405 (479)
..+.+..+.++++|.-.......++|||.+|| |||.+|.-. ..+++.=....+.++.++...... +..++... .+
T Consensus 257 ~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 257 PYPYLKAADLFVLSSRYEGFPNVLLEAMALGT-PVVATDCPG--PREILEDGENGLLVPVGDEAALAAAALALLDLLLDP 333 (353)
T ss_pred HHHHHHhCCEEEeCcccCCCCcHHHHHHHhCC-CEEEcCCCC--hHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCCh
Confidence 45678899999998755445668999999998 556665432 234444444556666655432000 12233332 35
Q ss_pred HHHHHHHH-HHHhHhhcc
Q 011685 406 DRILEYQR-ELKKVQRYF 422 (479)
Q Consensus 406 e~i~~Mr~-~l~~v~~~f 422 (479)
+...+|.+ +...+..+|
T Consensus 334 ~~~~~~~~~~~~~~~~~~ 351 (353)
T cd03811 334 ELRERLAAAARERVAREY 351 (353)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 55666777 444445443
No 23
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=93.49 E-value=0.6 Score=49.56 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=75.2
Q ss_pred ceEEEeecccccCCCchhHHHHHHHHcC---CCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhc
Q 011685 282 NTLLFFMGNRYRKEGGKIRDLLFNILET---EEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSL 358 (479)
Q Consensus 282 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~---~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aG 358 (479)
++-+.+.|.....++...++.|.++.++ .+.+.+ .|.. ...+..+.|+.|..++.|.=+......++|||++|
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f-~g~v---~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G 348 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEF-VVNA---PFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG 348 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEE-ecCC---CHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC
Confidence 4567777764332222334444443322 123333 2332 23567888999999998765555567899999999
Q ss_pred ceeEEeeCCccCCCCCCCC---CCcEEEEEeCCCcCCc-ccHHHHHccCCHHHHHHHHHHHHhHhhcceec
Q 011685 359 CVPVIVSDSIELPFEDVID---YRKIAVFVETSAATKP-GFLISTLRAVTPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 359 CIPVIisd~~~lPF~~~iD---w~~fSV~I~e~dv~~~-~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
|.||. ++. --|.++++. -..-.+.+. +..+. ..|.++|+. ++++...|+++.+++...|.+.
T Consensus 349 ~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 349 LIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSL-SEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred CcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhhCHH
Confidence 96664 442 135555553 222222232 22210 023444443 5666667777777788888764
No 24
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=93.41 E-value=0.14 Score=51.49 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=61.0
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccC
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAV 403 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I 403 (479)
..++.+.|+.|.+.+.|.........++|||.+|| |||.++.- ...+.+.-..-.+.++..+..... .|.+++.
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~-- 329 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA-- 329 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHh--
Confidence 34567789999999999876556778999999998 56666542 223334333445556654432200 1333333
Q ss_pred CHHHHHHHHHHHHhH-hhcceec
Q 011685 404 TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
.+++..+|.++.+.. .+.|+|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~s~~ 352 (365)
T cd03825 330 DPDEREELGEAARELAENEFDSR 352 (365)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHH
Confidence 466788888888775 5677664
No 25
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=93.28 E-value=0.049 Score=53.62 Aligned_cols=95 Identities=12% Similarity=0.158 Sum_probs=57.1
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC-C
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-T 404 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-s 404 (479)
.+..+.+.++.++++|.........++||+.+|| |||.++.-.. .+.+.-....+.+...+..+ +.+.|..+ .
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~--~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 343 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGI--PEIITDGENGLLVPPGDPEA---LAEAILRLLA 343 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCCh--HHHhcCCcceeEECCCCHHH---HHHHHHHHhc
Confidence 4567889999999999866656678999999999 6777764322 22333334345566555432 33333332 2
Q ss_pred HHHHHHHHHHHHhHhhcceecC
Q 011685 405 PDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
..+....++....+...|.|..
T Consensus 344 ~~~~~~~~~~~~~~~~~~s~~~ 365 (377)
T cd03798 344 DPWLRLGRAARRRVAERFSWEN 365 (377)
T ss_pred CcHHHHhHHHHHHHHHHhhHHH
Confidence 2222334444455677887753
No 26
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=93.26 E-value=0.42 Score=47.21 Aligned_cols=92 Identities=15% Similarity=0.331 Sum_probs=58.7
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.+..+.+++.|.-.......++|||.+|| |||.++..- ..+.+.- ...+.++.++ . .+.+.+..+
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~~-~---~~~~~i~~l~~ 344 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDDV-D---ALAAALRRALE 344 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCCh-H---HHHHHHHHHHh
Confidence 3567788999999998765555678999999997 888877432 2222222 3444444332 2 233333322
Q ss_pred CHHHHHHHHHHHHhH-hhcceec
Q 011685 404 TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
.+++..+|.++.++. .+.|.|.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 345 LPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHH
Confidence 347788888888776 7777764
No 27
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=92.96 E-value=0.16 Score=49.84 Aligned_cols=93 Identities=14% Similarity=0.139 Sum_probs=60.1
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.++.+.+++.|.........++|||.+|+ |||.++.-.. .+.+.=....+.++.++..+ +.+.+..+ .
T Consensus 256 ~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~---~~~~i~~l~~~ 329 (359)
T cd03808 256 DVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEA---LADAIERLIED 329 (359)
T ss_pred cHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHH---HHHHHHHHHhC
Confidence 456788999999999766556678999999996 7887765322 23333234455666555332 44443332 4
Q ss_pred HHHHHHHHHHHHhH-hhcceec
Q 011685 405 PDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
++...+|.++.++. ...|.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 330 PELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH
Confidence 67778887777665 6676653
No 28
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=92.86 E-value=0.2 Score=51.46 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=62.0
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCc---ccHHHHHcc
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKP---GFLISTLRA 402 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~---~~l~~iL~~ 402 (479)
.+..+.+..|..++.|.-.......++|||.+|| |||.++.-.. .+++.-....+.++..+.... ..+.+.|..
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~--~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI--PEVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH--HHHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 4567788999999998655445567899999999 8998875332 233333333455555443100 124434433
Q ss_pred C--CHHHHHHHHHHHHhH-hhcceecC
Q 011685 403 V--TPDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 403 I--s~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
+ .+++..+|.++.++. .+.|.|..
T Consensus 349 l~~~~~~~~~~~~~a~~~~~~~~s~~~ 375 (388)
T TIGR02149 349 LLADPELAKKMGIAGRKRAEEEFSWGS 375 (388)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 2 577788888887764 67788753
No 29
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=92.66 E-value=0.16 Score=51.85 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=62.6
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.++.|..++.|.-.......++|||.+|+ |||.++.-. ..+.+.-....+.++..+..+ +.+.+..+
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~~--~~e~i~~~~~g~~~~~~~~~~---l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVGG--PRDIVVDGVTGLLVDPRDPEA---LAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCCC--HHHHccCCCCeEEeCCCCHHH---HHHHHHHHHh
Confidence 3567778899999998765555668999999995 999887432 233343334556666555332 33333322
Q ss_pred CHHHHHHHHHHHHhH-hhcceec
Q 011685 404 TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
.+++..+|.++.+.. .+.|+|.
T Consensus 368 ~~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 368 DPALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 477888898888775 5888774
No 30
>PHA01630 putative group 1 glycosyl transferase
Probab=92.64 E-value=0.87 Score=47.01 Aligned_cols=41 Identities=10% Similarity=0.087 Sum_probs=31.3
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS 367 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~ 367 (479)
.+..+.++.+..++.|.-......-+.|||++|| |||.+|.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 4567788999988888644444567999999998 6777764
No 31
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=92.59 E-value=0.11 Score=51.23 Aligned_cols=92 Identities=11% Similarity=0.140 Sum_probs=58.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.|+.+.+++.|......+..++|||.+|| |||.++.-.. .+.++- ..+.++..+..+ +.+.+..+ .
T Consensus 261 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~---l~~~i~~l~~~ 332 (365)
T cd03807 261 DVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEA---LAEAIEALLAD 332 (365)
T ss_pred cHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHH---HHHHHHHHHhC
Confidence 456788999999999876656778999999996 7888764322 122221 344555544322 33333332 3
Q ss_pred HHHHHHHHHHHHhH-hhcceecC
Q 011685 405 PDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
+++..+|.++.+.. .++|.|..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 333 PALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred hHHHHHHHHHHHHHHHHhCCHHH
Confidence 46777777777664 77888753
No 32
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=92.37 E-value=0.14 Score=52.57 Aligned_cols=89 Identities=20% Similarity=0.237 Sum_probs=62.5
Q ss_pred hHHhhccCCCcEEEecCCCC-----------CCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc
Q 011685 326 RAATQGMHTSKFCLNPAGDT-----------PSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG 394 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds-----------~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~ 394 (479)
++..+.++. .|+|++.+++ .....++++|++|+ |||.++.-.++ +++.-....+.++ ++.
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~--- 288 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLE--- 288 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHH---
Confidence 445555655 8999887761 11235888888886 99998765433 4444455566665 222
Q ss_pred cHHHHHccCCHHHHHHHHHHHHhHhhcce
Q 011685 395 FLISTLRAVTPDRILEYQRELKKVQRYFI 423 (479)
Q Consensus 395 ~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~ 423 (479)
.+.+.|..++++++.+|+++.+++.+.+.
T Consensus 289 el~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 289 ELPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 38888999999999999999999877654
No 33
>PRK10307 putative glycosyl transferase; Provisional
Probab=92.36 E-value=0.51 Score=49.40 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=62.0
Q ss_pred HhHHhhccCCCcEEEecCCCCC----CcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHH
Q 011685 325 RRAATQGMHTSKFCLNPAGDTP----SACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTL 400 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~----ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL 400 (479)
..+..+.++.+..++.|.=.+. ....++|+|.+| +|||.++.--....+++. .-.+.++..|..+ +.+.|
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~---la~~i 367 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEA---LVAAI 367 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHH---HHHHH
Confidence 3466778888888887742221 133589999999 588888643222334555 3455666555433 55555
Q ss_pred ccC--CHHHHHHHHHHHHhH-hhcceecC
Q 011685 401 RAV--TPDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 401 ~~I--s~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
..+ .++...+|+++.+.. .++|.|..
T Consensus 368 ~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 368 AALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 443 467788999988874 77898864
No 34
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=92.17 E-value=0.19 Score=50.11 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=60.5
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHcc-C-
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRA-V- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~-I- 403 (479)
.++.+.++.+.+++.|.-....+..++|||.+|+ |||.++.-. ..+.++ +..+.++..+..+ +.+.|.. +
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~~--~~~~~~~~~~~~~---~~~~i~~l~~ 335 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVAG--DAALYFDPLDPEA---LAAAIERLLE 335 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--ccceec--CceeeeCCCCHHH---HHHHHHHHhc
Confidence 4567889999999988644334567999999997 777776432 223332 3445555555332 4444444 2
Q ss_pred CHHHHHHHHHHHHhHhhcceec
Q 011685 404 TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.++...+|.++.+.+...|.|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 336 DPALREELRERGLARAKRFSWE 357 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHH
Confidence 5777888888888777777764
No 35
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=91.84 E-value=1.1 Score=46.66 Aligned_cols=95 Identities=11% Similarity=0.145 Sum_probs=57.3
Q ss_pred hHHhhccCCCcEEEecCCC-CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEE-EEeCCCcCCcccHHHHHc-c
Q 011685 326 RAATQGMHTSKFCLNPAGD-TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAV-FVETSAATKPGFLISTLR-A 402 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gd-s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV-~I~e~dv~~~~~l~~iL~-~ 402 (479)
.+..+.++.|..++.|... .....-++|||++| +|||.++.--.| +++.-..-.. .++..+... +.+.|. -
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~--Eiv~~~~~G~~l~~~~d~~~---la~~I~~l 341 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT--EFVLEGITGYHLAEPMTSDS---IISDINRT 341 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH--hhcccCCceEEEeCCCCHHH---HHHHHHHH
Confidence 4567788999999998753 33456799999999 699988753322 3332222222 333334322 333332 2
Q ss_pred CCHHHHHHHHHHHHh-HhhcceecC
Q 011685 403 VTPDRILEYQRELKK-VQRYFIYDH 426 (479)
Q Consensus 403 Is~e~i~~Mr~~l~~-v~~~f~Y~~ 426 (479)
+...+..+|.++.++ +...|.|..
T Consensus 342 l~d~~~~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 342 LADPELTQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred HcCHHHHHHHHHHHHHHHHhCCHHH
Confidence 233445778888775 478888864
No 36
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=91.72 E-value=0.71 Score=45.65 Aligned_cols=90 Identities=11% Similarity=0.180 Sum_probs=57.0
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.++.|.+.+.|.........++|||.+|+ |||.++.-. +.+.+.-....+.++..+. + +.+.+..+
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~-~---~~~~i~~l~~ 342 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPG--LPDLVADGENGFLFPPGDE-A---LAEALLRLLQ 342 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCC--hhhheecCceeEEeCCCCH-H---HHHHHHHHHh
Confidence 4577889999999999765555678999999987 666665432 2344433344555655442 2 33333322
Q ss_pred CHHHHHHHHHHHHhHhhcc
Q 011685 404 TPDRILEYQRELKKVQRYF 422 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f 422 (479)
.++...+|+++.+.....+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 343 DPELRRRLSKNAEESAEKF 361 (374)
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 3556678888888775444
No 37
>PLN02949 transferase, transferring glycosyl groups
Probab=91.46 E-value=0.79 Score=49.63 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=55.6
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCC-CCC-cEEEEEeCCCcCCcc-cHHHHHcc
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVI-DYR-KIAVFVETSAATKPG-FLISTLRA 402 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~i-Dw~-~fSV~I~e~dv~~~~-~l~~iL~~ 402 (479)
.+..+.++++.+++.|.-+.....-+.|||++||+||..... =|-++++ ++. .-.-++.+ ++.... .|.+++..
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~~-~~~~la~ai~~ll~~ 422 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLAT-TVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccCC-CHHHHHHHHHHHHhC
Confidence 356677888998887765544566899999999877665432 1333332 111 00111111 221100 13333332
Q ss_pred CCHHHHHHHHHHHHhHhhcceecC
Q 011685 403 VTPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 403 Is~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
++++..+|+++.++....|++..
T Consensus 423 -~~~~r~~m~~~ar~~~~~FS~e~ 445 (463)
T PLN02949 423 -RETERLEIAAAARKRANRFSEQR 445 (463)
T ss_pred -CHHHHHHHHHHHHHHHHHcCHHH
Confidence 56778889998887666687754
No 38
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=90.93 E-value=0.9 Score=46.41 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=58.3
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccCCH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAVTP 405 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~Is~ 405 (479)
+..+.++.+..++.|.-.......+.|||.+|| |||..+--.-+ .+.+.=.+-.+.++..+..+.. .|..+|. .+
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~--~~ 346 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLN--DP 346 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHc--CH
Confidence 355678889988888644334567999999999 77776522111 1223323444556654533210 1333443 46
Q ss_pred HHHHHHHHHHHhHhhcceec
Q 011685 406 DRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 406 e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
+.+.+|+++.+.....|++.
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78899999888877776653
No 39
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=90.52 E-value=1.5 Score=45.16 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=59.2
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCCH
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVTP 405 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~ 405 (479)
.+..+.++.+..++.|.........+.|||.+| +|||.++.-..+ +.+.-....+.++..+... ..|.+.|. ++
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a-~~i~~ll~--~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAA-VRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHH-HHHHHHHc--CH
Confidence 456678888998888875554567899999999 599998754333 2332223333343222110 02444443 46
Q ss_pred HHHHHHHHHHHhH-hhcceec
Q 011685 406 DRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 406 e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
+...+|.++.++. ...|.|.
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 339 ELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 7788998888774 6788775
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=90.11 E-value=2.2 Score=42.58 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=58.9
Q ss_pred hHHhhccCCCcEEEecCC---CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHcc
Q 011685 326 RAATQGMHTSKFCLNPAG---DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRA 402 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G---ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~ 402 (479)
.+..+.++.+..++.|.- .+ ....+.|||.+|+ |||.++.-..+ +.+.+.......++..|..+ +.+.+..
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~-~g~~~~Ea~~~g~-Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~---~~~~i~~ 328 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEA-FGIVLLEAMAFGK-PVISTEIGTGG-SYVNLHGVTGLVVPPGDPAA---LAEAIRR 328 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccc-cchHHHHHHHcCC-CEEecCCCCch-hHHhhCCCceEEeCCCCHHH---HHHHHHH
Confidence 456778888999998852 33 3457999999985 77777643222 11122244555666555432 3333333
Q ss_pred C--CHHHHHHHHHHHHhH-hhcceec
Q 011685 403 V--TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 403 I--s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
+ .+++..+|+++.++. .++|++.
T Consensus 329 l~~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 329 LLEDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred HHHCHHHHHHHHHHHHHHHHHhcchH
Confidence 2 578889999998886 7777764
No 41
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.70 E-value=2.5 Score=42.36 Aligned_cols=91 Identities=12% Similarity=0.246 Sum_probs=53.9
Q ss_pred hHHhhccCCCcEEEecCCC-CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCC-cCCcccHHHHHccC
Q 011685 326 RAATQGMHTSKFCLNPAGD-TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSA-ATKPGFLISTLRAV 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gd-s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~d-v~~~~~l~~iL~~I 403 (479)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++.-. ..+++.-. ...++..+ +.+ .|..+++
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~~--~~e~~~~~--g~~~~~~~~l~~--~i~~l~~-- 329 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNPF--NREVLGDK--AIYFKVGDDLAS--LLEELEA-- 329 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCCc--cceeecCC--eeEecCchHHHH--HHHHHHh--
Confidence 3456777788877777544 334567999999999 778776432 23334332 23334333 211 1333333
Q ss_pred CHHHHHHHHHHHHhH-hhcceec
Q 011685 404 TPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
.++.+.+|.++.+.. ...|.|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 330 DPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 346778888877765 5667774
No 42
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=89.68 E-value=1.2 Score=47.73 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=56.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC-----cEEEEEeCCCcCCcc-cHHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR-----KIAVFVETSAATKPG-FLISTL 400 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~-----~fSV~I~e~dv~~~~-~l~~iL 400 (479)
...+.++.+.+++.|.-..+......|||.+||.||. ++.--++ +-+.|.+ ...+.+++.+..... .|.++|
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL 435 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 4567889999999998777777789999999996654 4432222 1122321 345556655533200 133333
Q ss_pred ccC--CHHHHHHHHHHHHhHhhcceecC
Q 011685 401 RAV--TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 401 ~~I--s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
... .++...+|.++.. .+.|+|..
T Consensus 436 ~~~~~~~~~~~~~~~~~~--~~~fsw~~ 461 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNAM--SQDFSWDK 461 (473)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCCcHH
Confidence 321 4566777776653 46787764
No 43
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=89.64 E-value=0.44 Score=49.73 Aligned_cols=92 Identities=11% Similarity=0.182 Sum_probs=56.2
Q ss_pred HHhhccCCCcEEEecC--CCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccC
Q 011685 327 AATQGMHTSKFCLNPA--GDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAV 403 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~--Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I 403 (479)
+....++.+..++.|. |.| ....++|||.+|| |||.++.- .+.+..-....+.++ .+..+.. .|.++|.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-- 361 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLA-- 361 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHc--
Confidence 3456678888888884 444 3457999999998 99988742 122211122344555 3432200 1333333
Q ss_pred CHHHHHHHHHHHHhH-hhcceecC
Q 011685 404 TPDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
.++...+|.++.++. ...|.|..
T Consensus 362 ~~~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 362 NPAEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 467788898888765 78888864
No 44
>PRK14098 glycogen synthase; Provisional
Probab=88.99 E-value=2 Score=46.76 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=60.6
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCC---CcEEEEEeCCCcCCcccHHHHHcc-
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDY---RKIAVFVETSAATKPGFLISTLRA- 402 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw---~~fSV~I~e~dv~~~~~l~~iL~~- 402 (479)
...+.++.+.+++.|.=..+......|||.+||+||+...+- ++ +.+.|+ ..-.+.++..+... +.+.|..
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~---la~ai~~~ 448 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEA---LVAKLGEA 448 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHH---HHHHHHHH
Confidence 456788999999999766667778999999999999865321 11 111121 22345556555322 4333332
Q ss_pred ---C-CHHHHHHHHHHHHhHhhcceecCCCchHHHHHH
Q 011685 403 ---V-TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWR 436 (479)
Q Consensus 403 ---I-s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~ 436 (479)
. .+++..+|+++. +.+.|+|......+..+.+
T Consensus 449 l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY~ 484 (489)
T PRK14098 449 LALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLYR 484 (489)
T ss_pred HHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHHH
Confidence 1 356666666543 4577888654344444443
No 45
>PRK00654 glgA glycogen synthase; Provisional
Probab=88.94 E-value=2.1 Score=45.99 Aligned_cols=101 Identities=21% Similarity=0.282 Sum_probs=58.7
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC-----cEEEEEeCCCcCCcccHHHHHcc
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR-----KIAVFVETSAATKPGFLISTLRA 402 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~-----~fSV~I~e~dv~~~~~l~~iL~~ 402 (479)
....++.+.+++.|.=..+......|||.+||+||+- +---++ +-+.|.+ .-.+.++..+... +.+.|..
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~-~~gG~~-e~v~~~~~~~~~~~G~lv~~~d~~~---la~~i~~ 424 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVR-RTGGLA-DTVIDYNPEDGEATGFVFDDFNAED---LLRALRR 424 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEe-CCCCcc-ceeecCCCCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 4567899999999976666677899999999988774 321111 1122321 3355666655332 4333332
Q ss_pred C-----CHHHHHHHHHHHHhHhhcceecCCCchHHHHH
Q 011685 403 V-----TPDRILEYQRELKKVQRYFIYDHPNGAVNEIW 435 (479)
Q Consensus 403 I-----s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il 435 (479)
+ .++...+|.++.. ...|+|......+..+.
T Consensus 425 ~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY 460 (466)
T PRK00654 425 ALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELY 460 (466)
T ss_pred HHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHH
Confidence 2 3455667766553 46777764333333333
No 46
>PRK14099 glycogen synthase; Provisional
Probab=88.23 E-value=2.9 Score=45.47 Aligned_cols=105 Identities=20% Similarity=0.217 Sum_probs=62.0
Q ss_pred HHhhcc-CCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC--------cEEEEEeCCCcCCcccHH
Q 011685 327 AATQGM-HTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR--------KIAVFVETSAATKPGFLI 397 (479)
Q Consensus 327 ~y~~~l-~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~--------~fSV~I~e~dv~~~~~l~ 397 (479)
+....+ +.+.+.+.|.=..+......|||.+||+||+ ++---++ +-+.|.+ .-.+.++..|... |.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~---La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADA---LA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHH---HH
Confidence 344445 5688888887666677789999999999988 4421121 1123332 2356666655332 44
Q ss_pred HHHcc----C-CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHH
Q 011685 398 STLRA----V-TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 398 ~iL~~----I-s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l 438 (479)
+.|.. + .++...+|+++.. .+.|+|......+..+.+++
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHH
Confidence 43332 2 4677788888764 47788875444444444433
No 47
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=87.54 E-value=1.1 Score=46.06 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=56.6
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCc-ccHHHHHccCCH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKP-GFLISTLRAVTP 405 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~-~~l~~iL~~Is~ 405 (479)
+..+.++.+.+++.|.........++|||.+| +|||.++.-- +-+-+.|.. -.+.++. +..+. ..|.+++. .+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~--~~ 365 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN--DP 365 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh--Ch
Confidence 44677889999998876654566789999999 5777776432 222233433 2344543 32220 01333333 35
Q ss_pred HHHHHHHHHHHh-Hhhcceec
Q 011685 406 DRILEYQRELKK-VQRYFIYD 425 (479)
Q Consensus 406 e~i~~Mr~~l~~-v~~~f~Y~ 425 (479)
+...+|+++.++ +...|.|.
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 678888888776 46777764
No 48
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=87.37 E-value=0.82 Score=45.72 Aligned_cols=91 Identities=10% Similarity=0.126 Sum_probs=55.2
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHcc---C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRA---V 403 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~---I 403 (479)
+..+.|+.+.+.+.|.........++|||.+|| |||.+|.-.. .+.+.=. ...++..+..+ +.+.+.. .
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~--~e~i~~~--g~~~~~~~~~~---~~~~i~~ll~~ 326 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGV--REVVGDS--GLIVPISDPEA---LANKIDEILKM 326 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCCh--hhEecCC--ceEeCCCCHHH---HHHHHHHHHhC
Confidence 456778889988888765555678999999999 8888774221 2222212 23344444332 3333332 3
Q ss_pred CHHHHHHHHHHHHhHhhcceec
Q 011685 404 TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
+++...+|.+....+.+.|.|.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~s~~ 348 (360)
T cd04951 327 SGEERDIIGARRERIVKKFSIN 348 (360)
T ss_pred CHHHHHHHHHHHHHHHHhcCHH
Confidence 5666666666644457777774
No 49
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=87.29 E-value=0.84 Score=37.35 Aligned_cols=72 Identities=10% Similarity=0.187 Sum_probs=43.5
Q ss_pred CcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEe-CCCcCCcccHHHHHccCCHHHHHHHHHHHHhH-hhccee
Q 011685 347 SACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVE-TSAATKPGFLISTLRAVTPDRILEYQRELKKV-QRYFIY 424 (479)
Q Consensus 347 ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~-e~dv~~~~~l~~iL~~Is~e~i~~Mr~~l~~v-~~~f~Y 424 (479)
...|+||+|.+|+..|. .+.-. +.+.++..+-.+.+. .+++.+ .|...|+ .+++.++|.++..+. ..++.|
T Consensus 11 ~~~r~~E~~a~G~~vi~-~~~~~--~~~~~~~~~~~~~~~~~~el~~--~i~~ll~--~~~~~~~ia~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 11 PNMRIFEAMACGTPVIS-DDSPG--LREIFEDGEHIITYNDPEELAE--KIEYLLE--NPEERRRIAKNARERVLKRHTW 83 (92)
T ss_pred CchHHHHHHHCCCeEEE-CChHH--HHHHcCCCCeEEEECCHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHhCCH
Confidence 45699999999995544 33322 222345555556664 233322 1333343 788999999988765 667776
Q ss_pred c
Q 011685 425 D 425 (479)
Q Consensus 425 ~ 425 (479)
.
T Consensus 84 ~ 84 (92)
T PF13524_consen 84 E 84 (92)
T ss_pred H
Confidence 4
No 50
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=86.26 E-value=3.6 Score=43.45 Aligned_cols=122 Identities=11% Similarity=0.159 Sum_probs=66.7
Q ss_pred eEEEeecccccCCCchhHHHHHHHHcCC--CcEEEecCccCcccHhHHhhccCCCcEEEecC----CCCCCcchHHHHHH
Q 011685 283 TLLFFMGNRYRKEGGKIRDLLFNILETE--EDVVIKHGTQSRESRRAATQGMHTSKFCLNPA----GDTPSACRLFDAIV 356 (479)
Q Consensus 283 ~L~~F~G~~~~~~~~~iR~~L~~~~~~~--~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~----Gds~ts~Rl~DAi~ 356 (479)
+.+.+.|. |..++.|.+..+.. .++.+..|.. ...++.+.|..+..++.|. |.+ ....++|||.
T Consensus 270 i~l~ivG~------G~~~~~l~~~~~~~~l~~~~~~~g~~---~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama 339 (415)
T cd03816 270 LLCIITGK------GPLKEKYLERIKELKLKKVTIRTPWL---SAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFG 339 (415)
T ss_pred EEEEEEec------CccHHHHHHHHHHcCCCcEEEEcCcC---CHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHH
Confidence 55666663 22345544444322 2344333322 2456778888888877532 333 2457999999
Q ss_pred hcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHcc-CCHHHHHHHHHHHHhHh
Q 011685 357 SLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRA-VTPDRILEYQRELKKVQ 419 (479)
Q Consensus 357 aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~-Is~e~i~~Mr~~l~~v~ 419 (479)
+|+ |||.++.-.. .+++.-..-.+.++ +..+.. .|.++|.. .++++..+|.++.++..
T Consensus 340 ~G~-PVI~s~~~~~--~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 340 CGL-PVCALDFKCI--DELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred cCC-CEEEeCCCCH--HHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 999 9999875322 23443232233342 322200 13444443 12788899988887764
No 51
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=85.93 E-value=2.2 Score=43.79 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=49.1
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccCCH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAVTP 405 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~Is~ 405 (479)
.+.+.++.+..++.|.........++|||++| +|||.++...-+ .+++.=..-.+.++..|..+.. .|.+++.+-..
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~-~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGP-RDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCCh-HHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 44566777888888866544567899999999 588888722222 2334323334455655543311 13333333221
Q ss_pred HHHHHHHHHHHhH
Q 011685 406 DRILEYQRELKKV 418 (479)
Q Consensus 406 e~i~~Mr~~l~~v 418 (479)
....++++++++.
T Consensus 328 ~~~~~~~~~~~~~ 340 (359)
T PRK09922 328 YQHDAIPNSIERF 340 (359)
T ss_pred CCHHHHHHHHHHh
Confidence 1234555555544
No 52
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=85.21 E-value=0.89 Score=46.13 Aligned_cols=62 Identities=15% Similarity=0.086 Sum_probs=40.8
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCc
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAA 390 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv 390 (479)
..+..+.++.+..++.|.-.+ ....++|||++|| |||.++.-..+ +.+.=.+..+.++..+.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~-~g~~~~Eama~G~-Pvi~~~~~~~~--e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 252 DEELRDLYARARAFLFPAEED-FGIVPVEAMASGT-PVIAYGKGGAL--ETVIDGVTGILFEEQTV 313 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCC-CCchHHHHHHcCC-CEEEeCCCCCc--ceeeCCCCEEEeCCCCH
Confidence 345788899999999885533 3456899999998 99988753322 33322344566665543
No 53
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=83.12 E-value=1.3 Score=43.94 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=33.0
Q ss_pred hHHhhccCCCcEEEecCC-CCCCcchHHHHHHhcceeEEeeCCcc
Q 011685 326 RAATQGMHTSKFCLNPAG-DTPSACRLFDAIVSLCVPVIVSDSIE 369 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G-ds~ts~Rl~DAi~aGCIPVIisd~~~ 369 (479)
.+..+.++.+.+++.|.- .......++|||.+|+ |||.+|.--
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~ 278 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGA 278 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCC
Confidence 345678899999999864 2334568999999997 999888643
No 54
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=83.07 E-value=1.4 Score=46.93 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=51.9
Q ss_pred cEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHccCCHHHHHHHHHH
Q 011685 336 KFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRAVTPDRILEYQRE 414 (479)
Q Consensus 336 ~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~Is~e~i~~Mr~~ 414 (479)
...+.|.-......-+.|||.+|| |||.++.-- ..++++-..-.+.++..|..... .|.++|. .+++..+|.++
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~~~~~ 416 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDALS--DSSQWQLWSRN 416 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHH
Confidence 344445433334557999999999 999998532 23444434445667766543210 1333333 46677788777
Q ss_pred HHh-HhhcceecC
Q 011685 415 LKK-VQRYFIYDH 426 (479)
Q Consensus 415 l~~-v~~~f~Y~~ 426 (479)
.+. +...|+|..
T Consensus 417 a~~~~~~~fsw~~ 429 (439)
T TIGR02472 417 GIEGVRRHYSWDA 429 (439)
T ss_pred HHHHHHHhCCHHH
Confidence 765 578888853
No 55
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=82.23 E-value=4.2 Score=44.49 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=51.4
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeC----CC----cCCc-ccHHH
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVET----SA----ATKP-GFLIS 398 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e----~d----v~~~-~~l~~ 398 (479)
..+.++.+.-++.|.=.......+.|||.+|| |||.+|--.-| .++|.=..-.+.++. .+ +.+. ..|..
T Consensus 386 ~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~-~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ 463 (500)
T TIGR02918 386 LSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN-PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVE 463 (500)
T ss_pred HHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC-HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHH
Confidence 34556666655555433334567999999998 77777631111 123322332334441 11 1110 01333
Q ss_pred HHccCCHHHHHHHHHHHHhHhhcceec
Q 011685 399 TLRAVTPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 399 iL~~Is~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
+| .+++..+|.++..+..+.|++.
T Consensus 464 ll---~~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 464 YF---NSNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred Hh---ChHHHHHHHHHHHHHHHhcCHH
Confidence 33 4667899999998888877764
No 56
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=82.11 E-value=1.4 Score=46.06 Aligned_cols=107 Identities=7% Similarity=0.082 Sum_probs=61.0
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCc-ccHHHHHccCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKP-GFLISTLRAVT 404 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~-~~l~~iL~~Is 404 (479)
.+..+.++.+..++.|.-.......+.|||.+|| |||.++.-.. .++++-. ..+.++. +..+. ..|.++|.. .
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~--~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~-~ 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGI--PEVLPPD-MILLAEP-DVESIVRKLEEAISI-L 334 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCc--hhheeCC-ceeecCC-CHHHHHHHHHHHHhC-h
Confidence 4667788888988887644334568999999998 6677765432 2344322 2344443 32210 024444443 2
Q ss_pred HHHHHHHHHHHHhHhhcceecCCCchHHHHHHHH
Q 011685 405 PDRILEYQRELKKVQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l 438 (479)
.++...+++...++...|+|..-...+..+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l 368 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRI 368 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 2232334455566788899875544555555544
No 57
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=79.55 E-value=3.3 Score=44.66 Aligned_cols=94 Identities=13% Similarity=0.188 Sum_probs=57.4
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCC------CcEEEEEeCCCcCCcc-cHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDY------RKIAVFVETSAATKPG-FLIST 399 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw------~~fSV~I~e~dv~~~~-~l~~i 399 (479)
+..+.|..+...+.|.-.......++|||++|| |||.+|.--. .++++- ....+.++..|..+.. .|.++
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~--~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~l 439 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSC--RELIEGADDEALGPAGEVVPPADPEALARAILRL 439 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCCh--HHHhcCCcccccCCceEEECCCCHHHHHHHHHHH
Confidence 345677788888877533334457999999999 8888764221 122221 2355666666643311 13333
Q ss_pred HccCCHHHHHHHHHHHHh-Hhhcceec
Q 011685 400 LRAVTPDRILEYQRELKK-VQRYFIYD 425 (479)
Q Consensus 400 L~~Is~e~i~~Mr~~l~~-v~~~f~Y~ 425 (479)
|. +++...+|.++.+. +.++|.|.
T Consensus 440 l~--~~~~~~~~~~~a~~~v~~~~s~~ 464 (475)
T cd03813 440 LK--DPELRRAMGEAGRKRVERYYTLE 464 (475)
T ss_pred hc--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 33 57788889888876 47777654
No 58
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=79.43 E-value=0.7 Score=39.98 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=32.3
Q ss_pred hHHhhccCCCcEEEecCC-CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEE
Q 011685 326 RAATQGMHTSKFCLNPAG-DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFV 385 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G-ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I 385 (479)
.++.+.++++.+++.|.- +...+..++|++.+|| |||.++. ++++.+.-....+.+
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-pvi~~~~---~~~~~~~~~~~~~~~ 118 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-PVIASDN---GAEGIVEEDGCGVLV 118 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE-
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-CEEECCc---chhhheeecCCeEEE
Confidence 368889999999999863 2235579999999998 5555655 343333334555666
No 59
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=78.45 E-value=9.7 Score=42.43 Aligned_cols=97 Identities=8% Similarity=-0.015 Sum_probs=54.1
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCC--
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVT-- 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is-- 404 (479)
+..+.|+.+..++.|.=.......+.|||.+|| |||.++.--.+ +.+.-..-.+.++..|............++.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l 541 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL 541 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCChhhHHHHHHHHHHHHHH
Confidence 456667888877777544445678999999999 99988753322 3333334455566655322111111112211
Q ss_pred HHHHHHHHHHHHh-HhhcceecC
Q 011685 405 PDRILEYQRELKK-VQRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~-v~~~f~Y~~ 426 (479)
.++..+|.++.+. +...|++..
T Consensus 542 l~~~~~mg~~ARe~V~e~FS~e~ 564 (578)
T PRK15490 542 WRSRTGICQQTQSFLQERFTVEH 564 (578)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHH
Confidence 1223345455554 577887753
No 60
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=77.57 E-value=17 Score=38.32 Aligned_cols=94 Identities=10% Similarity=0.127 Sum_probs=53.2
Q ss_pred HHhhccCC--CcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCC-CcCCcc-cHHHHHcc
Q 011685 327 AATQGMHT--SKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETS-AATKPG-FLISTLRA 402 (479)
Q Consensus 327 ~y~~~l~~--S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~-dv~~~~-~l~~iL~~ 402 (479)
+..+.++. +...+.|.........+.|||.+|+ |||.++---.| ++++=..-.+.++.. +..+.. .|.+++.
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~- 376 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID- 376 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-
Confidence 34455554 3223334322224567999999995 99988743332 344433334455442 322211 1334443
Q ss_pred CCHHHHHHHHHHHHhH-hhcceec
Q 011685 403 VTPDRILEYQRELKKV-QRYFIYD 425 (479)
Q Consensus 403 Is~e~i~~Mr~~l~~v-~~~f~Y~ 425 (479)
++++..+|+++.++. .++|.+.
T Consensus 377 -~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 377 -NEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred -CHHHHHHHHHHHHHHHHHHcCHH
Confidence 688999999998876 6777764
No 61
>PLN02939 transferase, transferring glycosyl groups
Probab=76.94 E-value=10 Score=44.63 Aligned_cols=106 Identities=14% Similarity=0.154 Sum_probs=62.2
Q ss_pred hhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC--------cEEEEEeCCCcCCc-ccHHHH
Q 011685 329 TQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR--------KIAVFVETSAATKP-GFLIST 399 (479)
Q Consensus 329 ~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~--------~fSV~I~e~dv~~~-~~l~~i 399 (479)
...++.|.+++.|.=..+......|||.+||+||+...+- + -+-+.|++ .-.+.++..+.... ..|...
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L-~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-L-NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-C-cceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 4578899999999766777788999999999998754321 1 11222332 22344444443210 012333
Q ss_pred HccC--CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHH
Q 011685 400 LRAV--TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 400 L~~I--s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l 438 (479)
|..+ .++...+|+++. +...|+|......+..+.+.+
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 3322 477888887753 457888875444444444444
No 62
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=76.40 E-value=9.8 Score=40.56 Aligned_cols=92 Identities=25% Similarity=0.316 Sum_probs=53.5
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC-----cEEEEEeCCCcCCcccHHHHHc
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR-----KIAVFVETSAATKPGFLISTLR 401 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~-----~fSV~I~e~dv~~~~~l~~iL~ 401 (479)
...+.++.+.+.+.|.-..+......|||.+||.||.- +.--++ +-+.|.. .-.+.++..+... +.+.|.
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~-~~gg~~-e~v~~~~~~~~~~~G~~~~~~~~~~---l~~~i~ 437 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR-ATGGLA-DTVIDYNEDTGEGTGFVFEGYNADA---LLAALR 437 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEEC-cCCCcc-ceEeCCcCCCCCCCeEEeCCCCHHH---HHHHHH
Confidence 34567888999999977666777899999999988753 321111 1122332 1345555544322 333333
Q ss_pred cC-----CHHHHHHHHHHHHhHhhcceec
Q 011685 402 AV-----TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 402 ~I-----s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.+ .+++..+|.++.. ...|.|.
T Consensus 438 ~~l~~~~~~~~~~~~~~~~~--~~~fsw~ 464 (476)
T cd03791 438 RALALYRDPEAWRKLQRNAM--AQDFSWD 464 (476)
T ss_pred HHHHHHcCHHHHHHHHHHHh--ccCCChH
Confidence 21 3566666766654 3456664
No 63
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=75.99 E-value=8 Score=38.67 Aligned_cols=40 Identities=23% Similarity=0.185 Sum_probs=31.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS 367 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~ 367 (479)
+..+.++.+.++++|.-.......++|||.+|| |||.++.
T Consensus 259 ~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~-PvI~s~~ 298 (358)
T cd03812 259 DVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL-PCILSDT 298 (358)
T ss_pred CHHHHHHhcCEEEecccccCCCHHHHHHHHhCC-CEEEEcC
Confidence 456788999999999766556778999999999 5555654
No 64
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=72.44 E-value=6.1 Score=46.98 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=59.3
Q ss_pred EEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--CHHHHHHHHHH
Q 011685 337 FCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--TPDRILEYQRE 414 (479)
Q Consensus 337 FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s~e~i~~Mr~~ 414 (479)
.++.|.=..+...-+.|||++|+ |||.++.-- ..+++.-..-.+.++..|... |.+.|..+ .++...+|.++
T Consensus 574 VFV~PS~~EgFGLvlLEAMAcGl-PVVASdvGG--~~EII~~g~nGlLVdP~D~ea---LA~AL~~LL~Dpelr~~m~~~ 647 (1050)
T TIGR02468 574 VFINPAFIEPFGLTLIEAAAHGL-PMVATKNGG--PVDIHRVLDNGLLVDPHDQQA---IADALLKLVADKQLWAECRQN 647 (1050)
T ss_pred eeeCCcccCCCCHHHHHHHHhCC-CEEEeCCCC--cHHHhccCCcEEEECCCCHHH---HHHHHHHHhhCHHHHHHHHHH
Confidence 44445434445568999999996 999987532 234444445566777666432 44333332 56778899999
Q ss_pred HHhHhhcceecCCCchHHHHHHHHH
Q 011685 415 LKKVQRYFIYDHPNGAVNEIWREVS 439 (479)
Q Consensus 415 l~~v~~~f~Y~~p~~a~~~il~~l~ 439 (479)
.++..+.|.|..-...+...+..+.
T Consensus 648 gr~~v~~FSWe~ia~~yl~~i~~~~ 672 (1050)
T TIGR02468 648 GLKNIHLFSWPEHCKTYLSRIASCR 672 (1050)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHh
Confidence 8877667888654344444444443
No 65
>PHA01633 putative glycosyl transferase group 1
Probab=71.48 E-value=5 Score=41.72 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=33.5
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI 368 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~ 368 (479)
.+..+.++.+.+-+.|.-......-+.|||.+|| |||.++--
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~ 256 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP 256 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC
Confidence 4567788889988888655556678999999999 99988653
No 66
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=70.18 E-value=20 Score=37.91 Aligned_cols=116 Identities=15% Similarity=0.159 Sum_probs=68.0
Q ss_pred CCCCceEEEeecccccCCCchhHHHHHHHHcCCCcEEEecCccC-----cccHhHHhhccCCCcEEEecC---CCCCCcc
Q 011685 278 VDNRNTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQS-----RESRRAATQGMHTSKFCLNPA---GDTPSAC 349 (479)
Q Consensus 278 ~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~-----~~~~~~y~~~l~~S~FCL~P~---Gds~ts~ 349 (479)
..+++.++.+..+.. ...-|..+++.+.+.=.+.+ .|.+. +.......+.+.+-||=|.-. -..+-+-
T Consensus 193 ~~k~~~~aw~vSnc~---~~~~R~~~~~~L~k~l~iD~-YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTE 268 (372)
T KOG2619|consen 193 SAKTKLAAWLVSNCI---PRSARLDYYKELMKHLEIDS-YGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYVTE 268 (372)
T ss_pred ccccceeeeeccccC---cchHHHHHHHHHHhhCceee-ccccccccccCCCCCcceeecccceEEEEecccCCcccccH
Confidence 455566666666543 34567777776655422222 23222 122345678888999999743 2234467
Q ss_pred hHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC
Q 011685 350 RLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV 403 (479)
Q Consensus 350 Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I 403 (479)
-|+-|+.+|.|||+++......| +. ++.-|.| +|...+..+.+.|+.+
T Consensus 269 Kfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~v--dDF~s~~ela~ylk~L 316 (372)
T KOG2619|consen 269 KFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHV--DDFQSPQELAAYLKKL 316 (372)
T ss_pred HHHhhhhcCcccEEECCcccccc---CC-CcceEeh--hhcCCHHHHHHHHHHh
Confidence 89999999999999998554333 33 3333444 4544322355556555
No 67
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=66.63 E-value=31 Score=36.33 Aligned_cols=88 Identities=10% Similarity=0.167 Sum_probs=54.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeC-----CccCCCCCCCCCCcEEE-EEeCCCcCCcccHHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSD-----SIELPFEDVIDYRKIAV-FVETSAATKPGFLISTL 400 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd-----~~~lPF~~~iDw~~fSV-~I~e~dv~~~~~l~~iL 400 (479)
+..+++.++++.+.-.=+.-......|+|++|-|||.=.. +++.|+ +.=.. |..+++ .+ ..+.+|
T Consensus 349 ~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~------~G~~tGFla~t~-~E--YaE~iL 419 (465)
T KOG1387|consen 349 KLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPW------DGETTGFLAPTD-EE--YAEAIL 419 (465)
T ss_pred HHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeecc------CCccceeecCCh-HH--HHHHHH
Confidence 4577888999998876666667889999999999987432 244554 33222 222222 11 233344
Q ss_pred cc--CCHHHHHHHHHHHHhHhhcce
Q 011685 401 RA--VTPDRILEYQRELKKVQRYFI 423 (479)
Q Consensus 401 ~~--Is~e~i~~Mr~~l~~v~~~f~ 423 (479)
+- .+.++...||++-+.--.+|.
T Consensus 420 kIv~~~~~~r~~~r~~AR~s~~RFs 444 (465)
T KOG1387|consen 420 KIVKLNYDERNMMRRNARKSLARFG 444 (465)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 33 256667888888776555553
No 68
>PLN02316 synthase/transferase
Probab=66.59 E-value=9.2 Score=45.49 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=61.6
Q ss_pred hccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC------------cEEEEEeCCCcCCc-ccH
Q 011685 330 QGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR------------KIAVFVETSAATKP-GFL 396 (479)
Q Consensus 330 ~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~------------~fSV~I~e~dv~~~-~~l 396 (479)
..++.+.+.+.|.=..+......|||.+||+||+-..+ -++ +-+.|++ .-.+.++..+.... ..|
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG-GL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG-GLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC-CcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHH
Confidence 57889999999987777788999999999999995432 111 1223332 23445555443210 013
Q ss_pred HHHHccCCHHHHHHHHHHHHh-HhhcceecCCCchHHHHHHHH
Q 011685 397 ISTLRAVTPDRILEYQRELKK-VQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 397 ~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~a~~~il~~l 438 (479)
...|... .+.-..|++..++ +.+.|+|......+..+-+++
T Consensus 993 ~raL~~~-~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 993 NRAISAW-YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred HHHHhhh-hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3333322 2333444555554 378899976555555444443
No 69
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=66.40 E-value=17 Score=42.09 Aligned_cols=88 Identities=7% Similarity=0.077 Sum_probs=53.9
Q ss_pred cEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHcc--CCHHHHHHHH
Q 011685 336 KFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRA--VTPDRILEYQ 412 (479)
Q Consensus 336 ~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~--Is~e~i~~Mr 412 (479)
..+++|.=..+...-+.|||.+|+ |||.++.--++ ++|.-..-.+.|+..|..... .|.++++. -.++...+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG~~--EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGGPL--EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 455667666667778999999998 55656532221 233334445667766643211 13333321 2678888998
Q ss_pred HHHHh-HhhcceecC
Q 011685 413 RELKK-VQRYFIYDH 426 (479)
Q Consensus 413 ~~l~~-v~~~f~Y~~ 426 (479)
++.++ +..+|+|..
T Consensus 722 ~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 722 QGGLQRIYEKYTWKI 736 (784)
T ss_pred HHHHHHHHHhCCHHH
Confidence 88654 688999864
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=60.25 E-value=13 Score=39.18 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=60.0
Q ss_pred HHhhccCCCcEEEecCCC-CCCcchHHHHHHhcceeEEeeCCccCCCCCC---CCCCcEEEEEeCCCcCCcccHHHHHcc
Q 011685 327 AATQGMHTSKFCLNPAGD-TPSACRLFDAIVSLCVPVIVSDSIELPFEDV---IDYRKIAVFVETSAATKPGFLISTLRA 402 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gd-s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~---iDw~~fSV~I~e~dv~~~~~l~~iL~~ 402 (479)
+..+.++.+..++++... .....-+.|||.+|| |||.+++.. -+.+. +.-..+.+.+ .|.. .+.+.|..
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~~--~d~~---~La~~l~~ 384 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQV--EDAE---DLAKAVTY 384 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEEE--CCHH---HHHHHHHH
Confidence 456777888877664322 112345999999997 888876531 11111 1113444443 2322 13333332
Q ss_pred C--CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHhhcc
Q 011685 403 V--TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQKLP 443 (479)
Q Consensus 403 I--s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~rlp 443 (479)
+ .++...+|.++.++..... .++.+.+++.+.+-++
T Consensus 385 ll~~~~~~~~m~~~a~~~~~~~-----~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAFLKQN-----QGALQRTLQLLEPYLP 422 (425)
T ss_pred HhcCHHHHHHHHHHHHHHHHhC-----ccHHHHHHHHHHHhcc
Confidence 2 5777888888877764321 4777888887776554
No 71
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=59.68 E-value=29 Score=36.38 Aligned_cols=84 Identities=8% Similarity=0.208 Sum_probs=50.2
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCC-----CCcEEEEEeCCCcCCcccHHHHHc
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVID-----YRKIAVFVETSAATKPGFLISTLR 401 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iD-----w~~fSV~I~e~dv~~~~~l~~iL~ 401 (479)
+..+.|+.|.+++..+|- ..+.||+.+|+ |||+.+.. |-++..+ =..+.+.+. +.. .+.+.|.
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~---~l~~~i~ 333 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPA--PGQELENALYFEEKGFGKIAD--TPE---EAIKIVA 333 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHH---HHHHHHH
Confidence 456788999988875442 25899999996 88887632 3222111 233444432 211 1333333
Q ss_pred cC--CHHHHHHHHHHHHhHhhcc
Q 011685 402 AV--TPDRILEYQRELKKVQRYF 422 (479)
Q Consensus 402 ~I--s~e~i~~Mr~~l~~v~~~f 422 (479)
.+ .++++.+|+++.....+.+
T Consensus 334 ~ll~~~~~~~~m~~~~~~~~~~~ 356 (391)
T PRK13608 334 SLTNGNEQLTNMISTMEQDKIKY 356 (391)
T ss_pred HHhcCHHHHHHHHHHHHHhcCCC
Confidence 22 5788889998888865443
No 72
>PF03128 CXCXC: CXCXC repeat; InterPro: IPR004153 This repeat contains the conserved pattern CXCXC where X can be any amino acid. The repeat is found in up to five copies in Vascular endothelial growth factor C []. In the salivary glands of the dipteran Chironomus tentans, a specific messenger ribonucleoprotein (mRNP) particle, the Balbiani ring (BR) granule, can be visualized during its assembly on the gene and during its nucleocytoplasmic transport. This repeat is found over 70 copies in the balbiani ring protein 3 (Q03376 from SWISSPROT). It is also found in some silk proteins [].
Probab=57.25 E-value=4.3 Score=22.45 Aligned_cols=12 Identities=17% Similarity=0.509 Sum_probs=9.7
Q ss_pred CCCCCcceeeee
Q 011685 459 ESSEPVCSSLCT 470 (479)
Q Consensus 459 ~~~~~~~~~~~~ 470 (479)
-|++..|+|.|.
T Consensus 3 ~wn~~tC~C~Cp 14 (14)
T PF03128_consen 3 VWNDDTCQCECP 14 (14)
T ss_pred eecCCCcCccCC
Confidence 377889999994
No 73
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=56.62 E-value=15 Score=40.98 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=61.4
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCC-C-CCCC-CCCcEEEEEeCCCcCCc----ccHHH
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELP-F-EDVI-DYRKIAVFVETSAATKP----GFLIS 398 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lP-F-~~~i-Dw~~fSV~I~e~dv~~~----~~l~~ 398 (479)
..|.+.++.+..++.|.-..++..-..|||++|+ |||.++..-++ | .+++ +-....|.|...+.... ..|.+
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~-PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcCC-CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 3688899999999999877777778999999995 99999875442 0 1222 34356777763221110 01322
Q ss_pred HHcc---CCHHHHHHHHHHHHhHhhcceecC
Q 011685 399 TLRA---VTPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 399 iL~~---Is~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
.|.. -+..+....|....++...|.|..
T Consensus 545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~ 575 (590)
T cd03793 545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRN 575 (590)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHH
Confidence 2332 244444444444447788888864
No 74
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=56.28 E-value=13 Score=37.49 Aligned_cols=84 Identities=12% Similarity=0.139 Sum_probs=48.0
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCC-----CCCCCCcEEEEEeCCC--cCCcc-cHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFE-----DVIDYRKIAVFVETSA--ATKPG-FLIS 398 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~-----~~iDw~~fSV~I~e~d--v~~~~-~l~~ 398 (479)
++.+.|..+..++.+.| ...++|||.+|+ |||+.+.-..+-+ +.+......+.++..+ ..+.. .|.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 56788899999998766 236999999997 7777532110000 1232344555565544 21100 1333
Q ss_pred HHccCCHHHHHHHHHHHHh
Q 011685 399 TLRAVTPDRILEYQRELKK 417 (479)
Q Consensus 399 iL~~Is~e~i~~Mr~~l~~ 417 (479)
+|. .++...+|.++.+.
T Consensus 318 ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHc--CHHHHHHHHHHHHh
Confidence 332 46677778777654
No 75
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=56.25 E-value=7.6 Score=40.27 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=29.7
Q ss_pred hHHhhccCCCcEEEecCCCC-----CCcchHHHHHHhcceeEEeeC
Q 011685 326 RAATQGMHTSKFCLNPAGDT-----PSACRLFDAIVSLCVPVIVSD 366 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds-----~ts~Rl~DAi~aGCIPVIisd 366 (479)
.+..+.++.+..|+.|--.. .....++|+|++|+ |||.++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 45678889999999985322 12346999999997 888654
No 76
>PRK10125 putative glycosyl transferase; Provisional
Probab=55.16 E-value=29 Score=36.80 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=41.7
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCc
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAA 390 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv 390 (479)
..+..+.++.+...+.|.-......-+.|||++|| |||.+|---.| ++++-. -.+.++..|+
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~~--Eiv~~~-~G~lv~~~d~ 358 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAAR--EVLQKS-GGKTVSEEEV 358 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCChH--HhEeCC-cEEEECCCCH
Confidence 34567778888877777655556678999999996 88888754333 344432 4666777664
No 77
>PLN00142 sucrose synthase
Probab=54.34 E-value=33 Score=39.97 Aligned_cols=88 Identities=7% Similarity=0.041 Sum_probs=52.9
Q ss_pred cEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHcc--CCHHHHHHHH
Q 011685 336 KFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRA--VTPDRILEYQ 412 (479)
Q Consensus 336 ~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~--Is~e~i~~Mr 412 (479)
...++|.=......-+.|||.+|+ |||.++.--.+ ++|.-..-.+.|+..+..... .|.+.|.. -.++...+|.
T Consensus 668 DVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~~--EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg 744 (815)
T PLN00142 668 GAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGPA--EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKIS 744 (815)
T ss_pred CEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 444567545555678999999997 78877643222 233334445667665533210 13333332 2677888888
Q ss_pred HHHH-hHhhcceecC
Q 011685 413 RELK-KVQRYFIYDH 426 (479)
Q Consensus 413 ~~l~-~v~~~f~Y~~ 426 (479)
++.+ ++...|+|..
T Consensus 745 ~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 745 DAGLQRIYECYTWKI 759 (815)
T ss_pred HHHHHHHHHhCCHHH
Confidence 8865 4678899863
No 78
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=52.47 E-value=1e+02 Score=31.55 Aligned_cols=119 Identities=18% Similarity=0.163 Sum_probs=62.0
Q ss_pred hhHHHHHHHHcCCCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCCCCCC
Q 011685 298 KIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPFEDVI 376 (479)
Q Consensus 298 ~iR~~L~~~~~~~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF~~~i 376 (479)
.++..+.+.+...+++.+. +.. +..++...|..+.+.+.+.|. -+.||+.+|+ |||...+. ..| +.+
T Consensus 242 ~~~~~~~~~~~~~~~v~~~-~~~---~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~ 309 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHLI-EPL---EYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETV 309 (365)
T ss_pred HHHHHHHHHhCCCCCEEEE-CCC---ChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHH
Confidence 4555555554433445443 211 234677888999998876542 3799999987 88875332 222 333
Q ss_pred CCCcEEEEEeCCCcCCcccHHHHHccC--CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHh
Q 011685 377 DYRKIAVFVETSAATKPGFLISTLRAV--TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQ 440 (479)
Q Consensus 377 Dw~~fSV~I~e~dv~~~~~l~~iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~ 440 (479)
+ ....+.++. +.. .|.+.|..+ .++...+|.++. -.|.+ +++...|++.|..
T Consensus 310 ~-~g~~~lv~~-d~~---~i~~ai~~ll~~~~~~~~~~~~~------~~~g~-~~a~~ri~~~l~~ 363 (365)
T TIGR00236 310 E-AGTNKLVGT-DKE---NITKAAKRLLTDPDEYKKMSNAS------NPYGD-GEASERIVEELLN 363 (365)
T ss_pred h-cCceEEeCC-CHH---HHHHHHHHHHhChHHHHHhhhcC------CCCcC-chHHHHHHHHHHh
Confidence 3 334444542 211 233333322 233333443322 22444 5677778777654
No 79
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=47.05 E-value=25 Score=33.35 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=28.9
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI 368 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~ 368 (479)
...+.++.+...+.|.-.......+.||+.+| +|||.++.-
T Consensus 269 ~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~ 309 (381)
T COG0438 269 ELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG 309 (381)
T ss_pred HHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC
Confidence 45557777888888843222223499999999 999887653
No 80
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=45.88 E-value=74 Score=36.52 Aligned_cols=93 Identities=11% Similarity=-0.011 Sum_probs=51.5
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcC--C-cccHHHHHccCC
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAAT--K-PGFLISTLRAVT 404 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~--~-~~~l~~iL~~Is 404 (479)
....|..+...+.|.-.......++|||.+|| |||.++.--. .++|.-..-.+.++..+.. . ...|.++|....
T Consensus 585 v~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG~--~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~ 661 (694)
T PRK15179 585 VGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGGA--GEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA 661 (694)
T ss_pred HHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCCh--HHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh
Confidence 45567777766666433345668999999996 8888774322 2334334445556655431 0 012444444432
Q ss_pred HHHHHHHHHHHHh-Hhhcceec
Q 011685 405 PDRILEYQRELKK-VQRYFIYD 425 (479)
Q Consensus 405 ~e~i~~Mr~~l~~-v~~~f~Y~ 425 (479)
. -.+|+++.+. +...|+|.
T Consensus 662 ~--~~~l~~~ar~~a~~~FS~~ 681 (694)
T PRK15179 662 A--DPGIARKAADWASARFSLN 681 (694)
T ss_pred c--cHHHHHHHHHHHHHhCCHH
Confidence 1 2345555554 45677764
No 81
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=37.47 E-value=46 Score=33.81 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=49.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC-ccC------CCCCCCCCCcEEEEEeCCCcCCcccHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS-IEL------PFEDVIDYRKIAVFVETSAATKPGFLIST 399 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~-~~l------PF~~~iDw~~fSV~I~e~dv~~~~~l~~i 399 (479)
++.+.|..+..++...| ..-++|||.+|+ |||+.+. ... ..+.+.+ ....+.++.+++. ...|.+.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~-~~~l~~~ 317 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLT-PEKLAEK 317 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCC-HHHHHHH
Confidence 56788889999998766 235999999997 5555432 111 1112333 3456677766531 1234443
Q ss_pred HccC--CHHHHHHHHHHHHhH
Q 011685 400 LRAV--TPDRILEYQRELKKV 418 (479)
Q Consensus 400 L~~I--s~e~i~~Mr~~l~~v 418 (479)
++.+ .++...+|+++.+++
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARAL 338 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHhc
Confidence 3332 366677788876554
No 82
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=36.78 E-value=40 Score=30.57 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=31.2
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS 367 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~ 367 (479)
..+...++.|..+++|.........++|||.+|| |||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 3455566669999999887677889999999987 5555554
No 83
>PLN02275 transferase, transferring glycosyl groups
Probab=36.18 E-value=1.2e+02 Score=31.29 Aligned_cols=75 Identities=11% Similarity=0.095 Sum_probs=46.7
Q ss_pred ceEEEeecccccCCCchhHHHHHHHHcC--CCcEEEecCccCcccHhHHhhccCCCcEEEecC----CCCCCcchHHHHH
Q 011685 282 NTLLFFMGNRYRKEGGKIRDLLFNILET--EEDVVIKHGTQSRESRRAATQGMHTSKFCLNPA----GDTPSACRLFDAI 355 (479)
Q Consensus 282 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~--~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~----Gds~ts~Rl~DAi 355 (479)
++-|.+.|. |..|+.|.+..++ -.++.+..|.. ..+++.+.|+.+..++.|. |.+ ....++|||
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~~~~---~~~~~~~~l~~aDv~v~~~~s~~~e~-~p~~llEAm 330 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRTMWL---EAEDYPLLLGSADLGVSLHTSSSGLD-LPMKVVDMF 330 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEcCCC---CHHHHHHHHHhCCEEEEecccccccc-ccHHHHHHH
Confidence 466778884 3445666555442 23444433322 2456788889999877653 222 244799999
Q ss_pred HhcceeEEeeCC
Q 011685 356 VSLCVPVIVSDS 367 (479)
Q Consensus 356 ~aGCIPVIisd~ 367 (479)
++|+ |||.++.
T Consensus 331 A~G~-PVVa~~~ 341 (371)
T PLN02275 331 GCGL-PVCAVSY 341 (371)
T ss_pred HCCC-CEEEecC
Confidence 9997 8888763
No 84
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=35.77 E-value=54 Score=34.05 Aligned_cols=79 Identities=16% Similarity=0.280 Sum_probs=46.8
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCC------CCCCCcEEEEEeCCCcCCcccHHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFED------VIDYRKIAVFVETSAATKPGFLISTL 400 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~------~iDw~~fSV~I~e~dv~~~~~l~~iL 400 (479)
+..+.|+.|...+.+.|- . .+.|||.+|+ |||+.+.. |-++ +++ ....+.+ .+.. .|.+.+
T Consensus 275 ~~~~l~~aaDv~V~~~g~--~--ti~EAma~g~-PvI~~~~~--pgqe~gn~~~i~~-~g~g~~~--~~~~---~la~~i 341 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP--G--TIAEALIRGL-PIILNGYI--PGQEEGNVPYVVD-NGFGAFS--ESPK---EIARIV 341 (382)
T ss_pred cHHHHHHhCCEEEECCCc--c--hHHHHHHcCC-CEEEecCC--CccchhhHHHHHh-CCceeec--CCHH---HHHHHH
Confidence 467788899988887762 2 4899999997 77777632 3222 122 3445544 2211 243333
Q ss_pred ccC---CHHHHHHHHHHHHhH
Q 011685 401 RAV---TPDRILEYQRELKKV 418 (479)
Q Consensus 401 ~~I---s~e~i~~Mr~~l~~v 418 (479)
..+ .++...+|+++.++.
T Consensus 342 ~~ll~~~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 342 AEWFGDKSDELEAMSENALKL 362 (382)
T ss_pred HHHHcCCHHHHHHHHHHHHHh
Confidence 322 266777787776653
No 85
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=34.86 E-value=1.4e+02 Score=29.87 Aligned_cols=150 Identities=13% Similarity=0.089 Sum_probs=82.4
Q ss_pred CCCceEEEeecccccCCCchhHHHHHHHHcCCCc-E--EEec-Cc-cCcccH-------hHHhhccCCCcEEEecCCCCC
Q 011685 279 DNRNTLLFFMGNRYRKEGGKIRDLLFNILETEED-V--VIKH-GT-QSRESR-------RAATQGMHTSKFCLNPAGDTP 346 (479)
Q Consensus 279 ~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d-~--~i~~-g~-~~~~~~-------~~y~~~l~~S~FCL~P~Gds~ 346 (479)
.+|.-.++|+|+... +..|+.|++...+.++ + .+.. .. ..|... ..-.+...+-+|=+...|.+.
T Consensus 81 ~~K~~~a~WRG~~~~---~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~ 157 (256)
T smart00672 81 SDKNAYAYWRGNPTV---ASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAW 157 (256)
T ss_pred cccCcCccccCCCCC---CcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCccc
Confidence 356667899998732 2289999988766554 2 2221 10 011100 012344567899999999985
Q ss_pred CcchHHHHHHhcceeEEeeCCccCCCC-CCCCCCcEEEEEeCCCcCCcccHHHHHccC--CHHHHHHHHHHHHhH-hhcc
Q 011685 347 SACRLFDAIVSLCVPVIVSDSIELPFE-DVIDYRKIAVFVETSAATKPGFLISTLRAV--TPDRILEYQRELKKV-QRYF 422 (479)
Q Consensus 347 ts~Rl~DAi~aGCIPVIisd~~~lPF~-~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s~e~i~~Mr~~l~~v-~~~f 422 (479)
+ -|+.=-|.+|+|++.....+..=|. ....|.-| |-|..+ ... .+|.++++=+ .+++.+++=++.+.. .+++
T Consensus 158 S-~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HY-vPv~~d-~sd-~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L 233 (256)
T smart00672 158 S-VRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHY-WPIKSD-LSC-RELKEAVDWGNEHDKKAQEIGKRGSEFIQQNL 233 (256)
T ss_pred h-hhHHHHHhcCceEEEeCCchhHHHHhcccCccce-EEeeCC-Cch-hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHc
Confidence 4 5899999999999887754321121 23345544 233321 110 1144444311 466666666677665 5556
Q ss_pred eecCCCchHHHHHHHH
Q 011685 423 IYDHPNGAVNEIWREV 438 (479)
Q Consensus 423 ~Y~~p~~a~~~il~~l 438 (479)
.. .+...+..+.|
T Consensus 234 ~~---~~~~~Y~~~ll 246 (256)
T smart00672 234 SM---EDVYDYMFHLL 246 (256)
T ss_pred CH---HHHHHHHHHHH
Confidence 53 34444444433
No 86
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=30.34 E-value=75 Score=21.08 Aligned_cols=22 Identities=36% Similarity=0.528 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 011685 41 LLKQTLIVLALFILAVYAFVNT 62 (479)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~ 62 (479)
+.-..+++++++....|+++|+
T Consensus 5 vi~g~llv~lLl~YLvYAL~na 26 (29)
T PRK14750 5 IVCGALLVLLLLGYLVYALFNA 26 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHcCc
Confidence 4455666666667777776664
No 87
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=28.66 E-value=54 Score=35.39 Aligned_cols=92 Identities=13% Similarity=0.034 Sum_probs=53.7
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcce---eEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHH
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCV---PVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTL 400 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCI---PVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL 400 (479)
..+..+.++.+.-++.|.-......-..|||++||= |||+++..-.+-+ ..-.+.|+..|..... .|.++|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHH
Confidence 446677788888777765333234568899999996 5898875422211 1224666665543311 133333
Q ss_pred ccCCHHHHHHHHHHHHhHhhcc
Q 011685 401 RAVTPDRILEYQRELKKVQRYF 422 (479)
Q Consensus 401 ~~Is~e~i~~Mr~~l~~v~~~f 422 (479)
. -++++..+|.++.++....+
T Consensus 426 ~-~~~~e~~~~~~~~~~~v~~~ 446 (460)
T cd03788 426 T-MPLEERRERHRKLREYVRTH 446 (460)
T ss_pred c-CCHHHHHHHHHHHHHHHHhC
Confidence 3 26667777766666654444
No 88
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=25.99 E-value=1.2e+02 Score=32.88 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=51.1
Q ss_pred HhHHhhccCCCcEEEecC-CCCCCcchHHHHHHhccee----EEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHH
Q 011685 325 RRAATQGMHTSKFCLNPA-GDTPSACRLFDAIVSLCVP----VIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLIS 398 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~-Gds~ts~Rl~DAi~aGCIP----VIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~ 398 (479)
..+..+.++.+.-|+.|. .+| ...-..|||++|+ | ||+++..-.+- .+. -++.|+..|..... .|.+
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG-~~Lv~lEamA~g~-P~~g~vVlS~~~G~~~--~l~---~gllVnP~d~~~lA~aI~~ 418 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDG-MNLVAKEYVAAQD-PKDGVLILSEFAGAAQ--ELN---GALLVNPYDIDGMADAIAR 418 (456)
T ss_pred HHHHHHHHHhCcEEEECccccc-cCccHHHHHHhcC-CCCceEEEeCCCCChH--HhC---CcEEECCCCHHHHHHHHHH
Confidence 456778888998888765 444 3457999999996 8 88887542221 122 25667776644311 1333
Q ss_pred HHccCCHHHHHHHHHHHHhH
Q 011685 399 TLRAVTPDRILEYQRELKKV 418 (479)
Q Consensus 399 iL~~Is~e~i~~Mr~~l~~v 418 (479)
+|.. ++++..++.+++++.
T Consensus 419 aL~~-~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 419 ALTM-PLEEREERHRAMMDK 437 (456)
T ss_pred HHcC-CHHHHHHHHHHHHHH
Confidence 4432 555555555555443
No 89
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=25.21 E-value=1.3e+02 Score=30.07 Aligned_cols=34 Identities=12% Similarity=0.258 Sum_probs=27.7
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEee
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVS 365 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIis 365 (479)
.+..+.|..+.+.++..| + .++|++.+| +|+|+-
T Consensus 233 ~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 233 ENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLAI 266 (279)
T ss_pred HHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEEE
Confidence 456789999999999876 3 399999999 677754
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=22.16 E-value=1.1e+02 Score=31.17 Aligned_cols=102 Identities=15% Similarity=0.162 Sum_probs=53.5
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCCC--CCCCCCcEEE------------EEeCCCcCC
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPFE--DVIDYRKIAV------------FVETSAATK 392 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF~--~~iDw~~fSV------------~I~e~dv~~ 392 (479)
..+.++.+...+++.|. ...||+.+|| |||+.... .+|+. +......+.. -+.+.+. .
T Consensus 255 ~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~ 327 (380)
T PRK00025 255 KREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA-T 327 (380)
T ss_pred HHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC-C
Confidence 45677888888887653 3559999997 87776443 12211 0111111110 0111111 1
Q ss_pred cccHHHHHccC--CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHh
Q 011685 393 PGFLISTLRAV--TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQ 440 (479)
Q Consensus 393 ~~~l~~iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~ 440 (479)
...|.+.+..+ .++...+|.++...+.+.+ . .++...+++.+..
T Consensus 328 ~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~---~-~~a~~~~~~~i~~ 373 (380)
T PRK00025 328 PEKLARALLPLLADGARRQALLEGFTELHQQL---R-CGADERAAQAVLE 373 (380)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh---C-CCHHHHHHHHHHH
Confidence 11243333332 5677788888887776655 1 3466666665544
No 91
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=21.31 E-value=64 Score=31.03 Aligned_cols=31 Identities=23% Similarity=0.520 Sum_probs=27.3
Q ss_pred CCcEEEecCCCCCCcchHHHHHHhcceeEEe
Q 011685 334 TSKFCLNPAGDTPSACRLFDAIVSLCVPVIV 364 (479)
Q Consensus 334 ~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIi 364 (479)
.-+|||+..|.+-.=.+.|||=+.+.|||+-
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~ 50 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVH 50 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEE
Confidence 4589999999887778899999999999984
No 92
>PF08630 Dfp1_Him1_M: Dfp1/Him1, central region; InterPro: IPR013939 This region, together with the C-terminal zinc finger (IPR006572 from INTERPRO) is essential for the mitotic and kinase activation functions of Dfp1/Him1 []. ; PDB: 3OQ0_J 3OQ4_D 3QBZ_A.
Probab=21.23 E-value=32 Score=30.82 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=0.0
Q ss_pred ccCCCceEEEecCCcccchhHHhhccc
Q 011685 88 FKSSKVKVYMYNLPRKFTYGIIEQHSM 114 (479)
Q Consensus 88 ~p~~~~~IYVYdLP~~Fn~~ll~~c~~ 114 (479)
..-++++||||||=.++-.=|+++|..
T Consensus 74 ~yFk~~yiyV~D~~q~~rPImvrEy~k 100 (125)
T PF08630_consen 74 HYFKGPYIYVYDLDQKTRPIMVREYPK 100 (125)
T ss_dssp ---------------------------
T ss_pred EecCCCEEEEEecCcCCCcEEEEeccc
Confidence 445689999999999998888888743
No 93
>PF15168 TRIQK: Triple QxxK/R motif-containing protein family
Probab=20.48 E-value=1.6e+02 Score=24.15 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=20.0
Q ss_pred hhhhhhHH-HHHHHH---HHHHHHHHHHHHHhhcCCC
Q 011685 35 MARKSSLL-KQTLIV---LALFILAVYAFVNTFFSPP 67 (479)
Q Consensus 35 ~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~ 67 (479)
-|+||+.- |-+.++ .+++++++|+||...++-+
T Consensus 40 eaKKta~gikev~l~l~ail~lL~a~Ya~fyl~ls~~ 76 (79)
T PF15168_consen 40 EAKKTAIGIKEVALVLAAILVLLLAFYAFFYLNLSKE 76 (79)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 46776553 333333 3446788888888776653
No 94
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=20.28 E-value=1e+02 Score=30.97 Aligned_cols=84 Identities=12% Similarity=0.189 Sum_probs=48.5
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-------cCCCCCCCCCCcEEEEEeCC--CcCCcccH
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-------ELPFEDVIDYRKIAVFVETS--AATKPGFL 396 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-------~lPF~~~iDw~~fSV~I~e~--dv~~~~~l 396 (479)
.++.+.|..+.+.+.+.|. .-+.|||.+|+ |||+.+.- ..+.+.+.+ ....+.++.. +.. .+
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~---~l 314 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPE---RL 314 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHH---HH
Confidence 3567788899988887662 35899999997 56654321 111222233 3445666543 222 24
Q ss_pred HHHHccC--CHHHHHHHHHHHHhH
Q 011685 397 ISTLRAV--TPDRILEYQRELKKV 418 (479)
Q Consensus 397 ~~iL~~I--s~e~i~~Mr~~l~~v 418 (479)
.+.|+.+ .++...+|+++.+..
T Consensus 315 ~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 315 AAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4333332 467777787776553
Done!