Query 011685
Match_columns 479
No_of_seqs 260 out of 829
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:14:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 97.2 0.0015 5.3E-08 57.3 10.0 129 282-426 32-162 (166)
2 2gek_A Phosphatidylinositol ma 96.0 0.0041 1.4E-07 62.1 4.5 110 326-441 274-386 (406)
3 2bfw_A GLGA glycogen synthase; 96.0 0.023 7.8E-07 51.1 8.9 124 282-419 70-196 (200)
4 3okp_A GDP-mannose-dependent a 95.8 0.0097 3.3E-07 59.0 5.8 94 326-426 264-367 (394)
5 3c48_A Predicted glycosyltrans 94.6 0.02 6.7E-07 58.0 3.9 107 326-438 317-425 (438)
6 2jjm_A Glycosyl transferase, g 94.3 0.03 1E-06 55.9 4.4 94 327-426 277-373 (394)
7 3fro_A GLGA glycogen synthase; 94.2 0.037 1.3E-06 55.4 4.9 95 325-426 321-418 (439)
8 3oy2_A Glycosyltransferase B73 93.3 0.085 2.9E-06 52.9 5.6 107 326-438 265-390 (413)
9 2iw1_A Lipopolysaccharide core 92.3 0.06 2.1E-06 52.8 2.8 93 327-425 263-358 (374)
10 2iuy_A Avigt4, glycosyltransfe 91.9 0.1 3.6E-06 50.9 4.0 100 326-438 223-335 (342)
11 2x6q_A Trehalose-synthase TRET 91.6 0.12 4.3E-06 51.8 4.3 92 327-426 308-402 (416)
12 2nzw_A Alpha1,3-fucosyltransfe 91.6 0.35 1.2E-05 49.4 7.5 84 279-367 177-267 (371)
13 1f0k_A MURG, UDP-N-acetylgluco 90.7 0.032 1.1E-06 54.9 -1.2 91 327-424 247-343 (364)
14 2r60_A Glycosyl transferase, g 90.2 0.09 3.1E-06 54.5 1.6 108 326-439 346-460 (499)
15 2qzs_A Glycogen synthase; glyc 89.8 0.5 1.7E-05 48.4 7.0 92 327-426 359-464 (485)
16 1rzu_A Glycogen synthase 1; gl 89.8 0.42 1.4E-05 49.0 6.4 92 327-426 358-463 (485)
17 2f9f_A First mannosyl transfer 87.7 0.1 3.4E-06 46.5 -0.1 41 326-367 89-129 (177)
18 2vsy_A XCC0866; transferase, g 86.0 1.1 3.9E-05 46.8 7.0 98 326-438 445-559 (568)
19 3rhz_A GTF3, nucleotide sugar 85.7 0.33 1.1E-05 48.7 2.5 93 325-425 224-323 (339)
20 3vue_A GBSS-I, granule-bound s 79.5 2.7 9.1E-05 44.7 6.6 107 327-438 394-511 (536)
21 2x0d_A WSAF; GT4 family, trans 79.4 0.72 2.5E-05 47.2 2.1 97 325-430 305-402 (413)
22 3s28_A Sucrose synthase 1; gly 73.8 3 0.0001 46.8 5.3 97 327-426 656-757 (816)
23 3beo_A UDP-N-acetylglucosamine 66.5 1.9 6.6E-05 42.0 1.6 95 327-440 275-371 (375)
24 1vgv_A UDP-N-acetylglucosamine 64.0 1.5 5.2E-05 43.0 0.2 96 326-440 274-371 (384)
25 3nb0_A Glycogen [starch] synth 61.9 3.4 0.00012 45.6 2.5 104 326-431 510-626 (725)
26 1uqt_A Alpha, alpha-trehalose- 44.9 18 0.0006 37.8 4.5 94 325-424 342-440 (482)
27 2o6l_A UDP-glucuronosyltransfe 44.8 21 0.00071 30.7 4.4 83 330-420 80-166 (170)
28 3s2u_A UDP-N-acetylglucosamine 41.8 18 0.00062 35.8 3.9 85 328-418 246-338 (365)
29 2e5h_A Zinc finger CCHC-type a 32.6 34 0.0012 26.2 3.4 26 86-111 10-35 (94)
30 3otg_A CALG1; calicheamicin, T 29.9 18 0.00061 35.6 1.5 88 327-420 301-392 (412)
31 2hy7_A Glucuronosyltransferase 26.4 28 0.00096 34.8 2.3 41 326-367 276-323 (406)
32 2fc9_A NCL protein; structure 25.5 60 0.0021 25.2 3.7 25 87-111 10-34 (101)
33 3oti_A CALG3; calicheamicin, T 24.0 3.7E+02 0.013 25.9 10.1 85 327-419 292-380 (398)
34 1iir_A Glycosyltransferase GTF 23.9 28 0.00095 34.7 1.7 85 329-422 296-382 (415)
35 2cqc_A Arginine/serine-rich sp 22.7 56 0.0019 24.9 3.0 25 87-111 10-34 (95)
36 3h4t_A Glycosyltransferase GTF 21.6 1.8E+02 0.0063 28.5 7.3 86 328-422 278-365 (404)
37 2cpj_A Non-POU domain-containi 21.2 82 0.0028 24.4 3.7 23 89-111 12-34 (99)
38 2do4_A Squamous cell carcinoma 20.5 85 0.0029 24.3 3.7 22 90-111 15-36 (100)
39 2dgo_A Cytotoxic granule-assoc 20.3 86 0.0029 25.0 3.8 25 87-111 10-34 (115)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.23 E-value=0.0015 Score=57.29 Aligned_cols=129 Identities=14% Similarity=0.119 Sum_probs=76.8
Q ss_pred ceEEEeecccccCCCchhHHHHHHHHcCCCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhccee
Q 011685 282 NTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVP 361 (479)
Q Consensus 282 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIP 361 (479)
++-+.+.|.- ..++.+.+..++.+. .+..|... ..+..+.++.+.+++.|.-.......++|||.+||||
T Consensus 32 ~~~l~i~G~g------~~~~~~~~~~~~~~~-~v~~g~~~---~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vP 101 (166)
T 3qhp_A 32 DIVLLLKGKG------PDEKKIKLLAQKLGV-KAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVP 101 (166)
T ss_dssp GEEEEEECCS------TTHHHHHHHHHHHTC-EEECCCCC---HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCE
T ss_pred CeEEEEEeCC------ccHHHHHHHHHHcCC-eEEEeecC---HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCc
Confidence 5667778852 234444444332222 22224332 4577889999999999875555567899999999999
Q ss_pred EEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--CHHHHHHHHHHHHhHhhcceecC
Q 011685 362 VIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 362 VIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
||..+..- ...++++-... .++..+..+ +.+.|..+ .++...+|.++.+...+.|.|..
T Consensus 102 vi~~~~~~-~~~~~~~~~~~--~~~~~~~~~---l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 102 VIANSPLS-ATRQFALDERS--LFEPNNAKD---LSAKIDWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp EEECCTTC-GGGGGCSSGGG--EECTTCHHH---HHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred EEeeCCCC-chhhhccCCce--EEcCCCHHH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 99944321 11222333333 444444322 33333332 67888999999888778888753
No 2
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.05 E-value=0.0041 Score=62.06 Aligned_cols=110 Identities=13% Similarity=0.151 Sum_probs=69.7
Q ss_pred hHHhhccCCCcEEEecCC-CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC-
Q 011685 326 RAATQGMHTSKFCLNPAG-DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G-ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I- 403 (479)
.++.+.|+.+.+++.|.. .......++|||.+|| |||.++.-.+ .+.++-....+.++..+..+ +.+.|..+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~--~e~i~~~~~g~~~~~~d~~~---l~~~i~~l~ 347 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAF--RRVLADGDAGRLVPVDDADG---MAAALIGIL 347 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHHH--HHHHTTTTSSEECCTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCcH--HHHhcCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 356788999999999952 3334568999999998 7888775321 12233233345555444332 44444433
Q ss_pred -CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHhh
Q 011685 404 -TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQK 441 (479)
Q Consensus 404 -s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~r 441 (479)
.++...+|.++.++....|.|..-...+..+++++..+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 348 EDDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 67888899998888755888765444555555555443
No 3
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.02 E-value=0.023 Score=51.11 Aligned_cols=124 Identities=14% Similarity=0.162 Sum_probs=75.0
Q ss_pred ceEEEeecccccCCCchhHHHHHHHHcCCCcEEEecCccCcccHhHHhhccCCCcEEEecCCCCCCcchHHHHHHhccee
Q 011685 282 NTLLFFMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQSRESRRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVP 361 (479)
Q Consensus 282 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~~~~~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIP 361 (479)
++-+.+.|... ...++.+.+..++.+.+.+..|.. ...++.+.|+.+.+++.|.-.......++|||.+|| |
T Consensus 70 ~~~l~i~G~~~----~~~~~~l~~~~~~~~~v~~~~g~~---~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-P 141 (200)
T 2bfw_A 70 EMRFIIIGKGD----PELEGWARSLEEKHGNVKVITEML---SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-I 141 (200)
T ss_dssp GEEEEEECCBC----HHHHHHHHHHHHHCTTEEEECSCC---CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-E
T ss_pred CeEEEEECCCC----hHHHHHHHHHHHhcCCEEEEeccC---CHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-C
Confidence 34566777521 114555555544433555424543 235678899999999999765556678999999998 6
Q ss_pred EEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC---CHHHHHHHHHHHHhHh
Q 011685 362 VIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV---TPDRILEYQRELKKVQ 419 (479)
Q Consensus 362 VIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I---s~e~i~~Mr~~l~~v~ 419 (479)
||.++.-. +.+.++ ....+.++..+.. .+.+.|..+ .++++.+|.++.+...
T Consensus 142 vI~~~~~~--~~e~~~-~~~g~~~~~~~~~---~l~~~i~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 142 PIASAVGG--LRDIIT-NETGILVKAGDPG---ELANAILKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp EEEESCHH--HHHHCC-TTTCEEECTTCHH---HHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC--hHHHcC-CCceEEecCCCHH---HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 77776431 122232 2234455544432 244444333 7888899998888763
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=95.78 E-value=0.0097 Score=58.96 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=65.1
Q ss_pred hHHhhccCCCcEEEecCCC-------CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHH
Q 011685 326 RAATQGMHTSKFCLNPAGD-------TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLIS 398 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gd-------s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~ 398 (479)
.+..+.++.+.+++.|.-. ......++|||.+|| |||.++.- ...++++-. ..+.++..+..+ +.+
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~i~~~-~g~~~~~~d~~~---l~~ 336 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTSG--GAPETVTPA-TGLVVEGSDVDK---LSE 336 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSST--TGGGGCCTT-TEEECCTTCHHH---HHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCCC--ChHHHHhcC-CceEeCCCCHHH---HHH
Confidence 5678889999999998765 445678999999995 88887743 233444444 566666555332 444
Q ss_pred HHccC--CHHHHHHHHHHHHhH-hhcceecC
Q 011685 399 TLRAV--TPDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 399 iL~~I--s~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
.|..+ .++...+|.++.+.. ..+|.|..
T Consensus 337 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 367 (394)
T 3okp_A 337 LLIELLDDPIRRAAMGAAGRAHVEAEWSWEI 367 (394)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 44333 788889999888775 66788753
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.62 E-value=0.02 Score=58.01 Aligned_cols=107 Identities=9% Similarity=0.137 Sum_probs=68.9
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.|+.+.+++.|.-.......++|||.+|| |||.++.-- ..+++.-....+.++..+... +.+.|..+
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~ 390 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGG--LPIAVAEGETGLLVDGHSPHA---WADALATLLD 390 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTT--HHHHSCBTTTEEEESSCCHHH---HHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCC--hhHHhhCCCcEEECCCCCHHH---HHHHHHHHHc
Confidence 4567889999999999765555678999999999 888887422 223344344456666555332 44433332
Q ss_pred CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHH
Q 011685 404 TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l 438 (479)
.++...+|.++.++....|.|..-...+..+++++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 425 (438)
T 3c48_A 391 DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA 425 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 67788899888887644487754334444444444
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.29 E-value=0.03 Score=55.93 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=63.9
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.|+.+.+++.|.-.......++|||.+|| |||.++.-- ..++++-....+.++..+..+ +.+.|..+ .
T Consensus 277 ~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-PvI~~~~~~--~~e~v~~~~~g~~~~~~d~~~---la~~i~~l~~~ 350 (394)
T 2jjm_A 277 NVAELLAMSDLMLLLSEKESFGLVLLEAMACGV-PCIGTRVGG--IPEVIQHGDTGYLCEVGDTTG---VADQAIQLLKD 350 (394)
T ss_dssp CTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTC-CEEEECCTT--STTTCCBTTTEEEECTTCHHH---HHHHHHHHHHC
T ss_pred hHHHHHHhCCEEEeccccCCCchHHHHHHhcCC-CEEEecCCC--hHHHhhcCCceEEeCCCCHHH---HHHHHHHHHcC
Confidence 456788899999998755445678999999995 788877432 334554444566676555332 44444333 6
Q ss_pred HHHHHHHHHHHHhH-hhcceecC
Q 011685 405 PDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
++...+|.++.+.. ...|.|..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~~ 373 (394)
T 2jjm_A 351 EELHRNMGERARESVYEQFRSEK 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHH
Confidence 77888998888876 48888754
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.23 E-value=0.037 Score=55.43 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=63.1
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC-
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV- 403 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I- 403 (479)
..+..+.++.+..++.|.-.......++|||++|| |||.++.-.. .++++-. ..+.++..|... +.+.|..+
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~~--~e~~~~~-~g~~~~~~d~~~---la~~i~~ll 393 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGL--RDIITNE-TGILVKAGDPGE---LANAILKAL 393 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTHH--HHHCCTT-TCEEECTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCCc--ceeEEcC-ceEEeCCCCHHH---HHHHHHHHH
Confidence 34577889999999999766556678999999996 7887764321 2333222 445666555432 44333322
Q ss_pred --CHHHHHHHHHHHHhHhhcceecC
Q 011685 404 --TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 404 --s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
.++...+|.++.++....|.|..
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~s~~~ 418 (439)
T 3fro_A 394 ELSRSDLSKFRENCKKRAMSFSWEK 418 (439)
T ss_dssp HHTTTTTHHHHHHHHHHHHTSCHHH
T ss_pred hcCHHHHHHHHHHHHHHHhhCcHHH
Confidence 46788889888888767787753
No 8
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=93.30 E-value=0.085 Score=52.88 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=64.2
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCC--------CCCcE-------EE--EEeCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVI--------DYRKI-------AV--FVETS 388 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~i--------Dw~~f-------SV--~I~e~ 388 (479)
.+..+.++.+..++.|.-.......+.|||.+|| |||.++.--.+ +++ +...+ .+ .++..
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~--e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~ 341 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGAD--DYFSGDCVYKIKPSAWISVDDRDGIGGIEGII 341 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHH--HHSCTTTSEEECCCEEEECTTTCSSCCEEEEC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChH--HHHccCcccccccccccccccccCcceeeCCC
Confidence 4577788999999998755455678999999997 88888752111 111 11111 22 33433
Q ss_pred CcCCcccHHHHHccC-CHHHHHHHHHHHHhH-hhcceecCCCchHHHHHHHH
Q 011685 389 AATKPGFLISTLRAV-TPDRILEYQRELKKV-QRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 389 dv~~~~~l~~iL~~I-s~e~i~~Mr~~l~~v-~~~f~Y~~p~~a~~~il~~l 438 (479)
+... +.+.|+-+ .++...+|.++.++. ...|.|..-...+..+++.+
T Consensus 342 d~~~---la~~i~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 342 DVDD---LVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp CHHH---HHHHHHHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred CHHH---HHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4322 44444212 567778898888876 57888864334444444443
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.34 E-value=0.06 Score=52.85 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=60.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEe-CCCcCCcccHHHHHccC--
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVE-TSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~-e~dv~~~~~l~~iL~~I-- 403 (479)
+..+.|+.+.+++.|.-.......++|||.+|+ |||.++.--. .+.+.-....+.++ ..+..+ +.+.|..+
T Consensus 263 ~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~~~~~~---l~~~i~~l~~ 336 (374)
T 2iw1_A 263 DVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCGY--AHYIADANCGTVIAEPFSQEQ---LNEVLRKALT 336 (374)
T ss_dssp CHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTSTT--THHHHHHTCEEEECSSCCHHH---HHHHHHHHHH
T ss_pred cHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCCCc--hhhhccCCceEEeCCCCCHHH---HHHHHHHHHc
Confidence 457788889999998754445678999999999 8888875321 22232233455665 334322 43333333
Q ss_pred CHHHHHHHHHHHHhHhhcceec
Q 011685 404 TPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
.++...+|.++.++....+.|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 337 QSPLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCS
T ss_pred ChHHHHHHHHHHHHHHHHhhHH
Confidence 6888899999988876655554
No 10
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=91.93 E-value=0.1 Score=50.87 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=57.8
Q ss_pred hHHhhccCCCcEEEecCC----------CCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCC--CcEEEEEeCCCcCCc
Q 011685 326 RAATQGMHTSKFCLNPAG----------DTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDY--RKIAVFVETSAATKP 393 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~G----------ds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw--~~fSV~I~e~dv~~~ 393 (479)
.+..+.|+.+..++.|.- .......+.|||.+|| |||.++.-- ..+++.- ....+.++. +..
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~~--~~e~~~~~~~~~g~~~~~-d~~-- 296 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGC--LAEIVPSVGEVVGYGTDF-APD-- 296 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTTT--HHHHGGGGEEECCSSSCC-CHH--
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCCC--hHHHhcccCCCceEEcCC-CHH--
Confidence 356788899999998865 3445678999999997 888887421 2233322 222333443 432
Q ss_pred ccHHHHHccCCHHHHHHHHHHHHh-HhhcceecCCCchHHHHHHHH
Q 011685 394 GFLISTLRAVTPDRILEYQRELKK-VQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 394 ~~l~~iL~~Is~e~i~~Mr~~l~~-v~~~f~Y~~p~~a~~~il~~l 438 (479)
.+.+.|..+-. .++.++ +...|.|..-...+..+++++
T Consensus 297 -~l~~~i~~l~~------~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 335 (342)
T 2iuy_A 297 -EARRTLAGLPA------SDEVRRAAVRLWGHVTIAERYVEQYRRL 335 (342)
T ss_dssp -HHHHHHHTSCC------HHHHHHHHHHHHBHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHH------HHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 36666666544 233333 457777754333444444433
No 11
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=91.60 E-value=0.12 Score=51.80 Aligned_cols=92 Identities=15% Similarity=0.056 Sum_probs=58.6
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.++.+..++.|.-.......++|||.+|| |||.++.--.+ +++.-....+.++ +.. .+.+.|..+ .
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g~~--e~i~~~~~g~l~~--d~~---~la~~i~~ll~~ 379 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIK--FQIVDGETGFLVR--DAN---EAVEVVLYLLKH 379 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHHHH--HHCCBTTTEEEES--SHH---HHHHHHHHHHHC
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCCCh--hheecCCCeEEEC--CHH---HHHHHHHHHHhC
Confidence 567788889988888644445668999999998 88888752211 2232233344454 322 243333332 6
Q ss_pred HHHHHHHHHHHHhH-hhcceecC
Q 011685 405 PDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
++...+|.++.+.. ...|.|..
T Consensus 380 ~~~~~~~~~~a~~~~~~~fs~~~ 402 (416)
T 2x6q_A 380 PEVSKEMGAKAKERVRKNFIITK 402 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH
Confidence 78888998888775 56888753
No 12
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=91.56 E-value=0.35 Score=49.43 Aligned_cols=84 Identities=18% Similarity=0.201 Sum_probs=55.3
Q ss_pred CCCceEEE-eecccccCCCchhHHHHHHHHcCCCcEEEecCccC---cccHhHHhhccCCCcEEEecC---CCCCCcchH
Q 011685 279 DNRNTLLF-FMGNRYRKEGGKIRDLLFNILETEEDVVIKHGTQS---RESRRAATQGMHTSKFCLNPA---GDTPSACRL 351 (479)
Q Consensus 279 ~~R~~L~~-F~G~~~~~~~~~iR~~L~~~~~~~~d~~i~~g~~~---~~~~~~y~~~l~~S~FCL~P~---Gds~ts~Rl 351 (479)
..++-++. ++.+. . ...|..+++.+.+.-.+.+ .|.+. +.......+.+++-+|.|+.. .....+--+
T Consensus 177 ~~K~k~v~wvvSnc-~---~~~R~~~~~~L~k~i~Vd~-~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~ 251 (371)
T 2nzw_A 177 PLKRGFASFVASNP-N---APIRNAFYDALNSIEPVTG-GGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKI 251 (371)
T ss_dssp TTSSEEEEECCSCC-C---CHHHHHHHHHHTTTSCCEE-CSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHH
T ss_pred CCCceEEEEEEeCC-C---cHHHHHHHHHHhCcCCEee-CCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHH
Confidence 34445555 44443 2 2579999988876544432 34321 111234567789999999854 355667899
Q ss_pred HHHHHhcceeEEeeCC
Q 011685 352 FDAIVSLCVPVIVSDS 367 (479)
Q Consensus 352 ~DAi~aGCIPVIisd~ 367 (479)
|+|+.+|||||+++..
T Consensus 252 ~~al~~g~VPI~~G~~ 267 (371)
T 2nzw_A 252 IDAYFSHTIPIYWGSP 267 (371)
T ss_dssp HHHHHTTCEEEEESCT
T ss_pred HHHHhCCeEEEEECCC
Confidence 9999999999999864
No 13
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=90.65 E-value=0.032 Score=54.91 Aligned_cols=91 Identities=9% Similarity=0.005 Sum_probs=60.3
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCC------CCCCCCCcEEEEEeCCCcCCcccHHHHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPF------EDVIDYRKIAVFVETSAATKPGFLISTL 400 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF------~~~iDw~~fSV~I~e~dv~~~~~l~~iL 400 (479)
+..+.|+.+..++.|.| ...+.|||.+|+ |||..+.--.|. ..+++-.. .+.++..|.. ...+.+.|
T Consensus 247 ~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~-~~~la~~i 319 (364)
T 1f0k_A 247 DMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLS-VDAVANTL 319 (364)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCC-HHHHHHHH
T ss_pred hHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCC-HHHHHHHH
Confidence 45677888999999976 457999999997 888886543332 12333333 6677765521 12377777
Q ss_pred ccCCHHHHHHHHHHHHhHhhccee
Q 011685 401 RAVTPDRILEYQRELKKVQRYFIY 424 (479)
Q Consensus 401 ~~Is~e~i~~Mr~~l~~v~~~f~Y 424 (479)
..+.++...+|.++.++....|.|
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~ 343 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAASIPDAT 343 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTCCTTHH
T ss_pred HhcCHHHHHHHHHHHHHhhccCHH
Confidence 777777788888887776544443
No 14
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=90.15 E-value=0.09 Score=54.48 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=66.5
Q ss_pred hHHhhccCCC----cEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHc
Q 011685 326 RAATQGMHTS----KFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLR 401 (479)
Q Consensus 326 ~~y~~~l~~S----~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~ 401 (479)
.+..+.|+.+ ..++.|.-.......++|||.+|| |||.++.--. .+++.-....+.++..|... +.+.|.
T Consensus 346 ~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g~--~e~v~~~~~g~l~~~~d~~~---la~~i~ 419 (499)
T 2r60_A 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGP--AEILDGGKYGVLVDPEDPED---IARGLL 419 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBHH--HHHTGGGTSSEEECTTCHHH---HHHHHH
T ss_pred HHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCCH--HHHhcCCceEEEeCCCCHHH---HHHHHH
Confidence 4667888888 888888644445568999999998 8888874221 22232222344555544322 333333
Q ss_pred cC--CHHHHHHHHHHHHhH-hhcceecCCCchHHHHHHHHH
Q 011685 402 AV--TPDRILEYQRELKKV-QRYFIYDHPNGAVNEIWREVS 439 (479)
Q Consensus 402 ~I--s~e~i~~Mr~~l~~v-~~~f~Y~~p~~a~~~il~~l~ 439 (479)
.+ .++...+|.++.+.. ..+|.|..-...+..+++++.
T Consensus 420 ~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 420 KAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 22 677788898888775 566888654444555555443
No 15
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=89.82 E-value=0.5 Score=48.41 Aligned_cols=92 Identities=17% Similarity=0.113 Sum_probs=56.9
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC---------cEEEEEeCCCcCCcccHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR---------KIAVFVETSAATKPGFLI 397 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~---------~fSV~I~e~dv~~~~~l~ 397 (479)
...+.|+.+..++.|.-.......+.|||.+|| |||.++.--+ .+++.-. ...+.++..+... +.
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 432 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGGL--ADTVSDCSLENLADGVASGFVFEDSNAWS---LL 432 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEECSSSHHH---HH
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCCc--cceeccCccccccccccceEEECCCCHHH---HH
Confidence 346788889999988755555678999999997 7777764211 1223222 3455566555332 43
Q ss_pred HHHccC-----CHHHHHHHHHHHHhHhhcceecC
Q 011685 398 STLRAV-----TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 398 ~iL~~I-----s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
+.|..+ .++...+|.++.+. +.|+|..
T Consensus 433 ~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~ 464 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQV 464 (485)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHH
Confidence 333332 56777888877653 6677653
No 16
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=89.82 E-value=0.42 Score=48.98 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=56.9
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC---------cEEEEEeCCCcCCcccHH
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR---------KIAVFVETSAATKPGFLI 397 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~---------~fSV~I~e~dv~~~~~l~ 397 (479)
...+.++.+..++.|.-.......+.|||.+|| |||.++.--+ .+++.-. ...+.++..+... +.
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 431 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGL--ADTVIDANHAALASKAATGVQFSPVTLDG---LK 431 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEESSCSHHH---HH
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCCh--hheecccccccccccCCcceEeCCCCHHH---HH
Confidence 446788899999998765555678999999997 7777764211 1222222 3345566555332 43
Q ss_pred HHHccC-----CHHHHHHHHHHHHhHhhcceecC
Q 011685 398 STLRAV-----TPDRILEYQRELKKVQRYFIYDH 426 (479)
Q Consensus 398 ~iL~~I-----s~e~i~~Mr~~l~~v~~~f~Y~~ 426 (479)
+.|..+ .++...+|.++.+. +.|.|..
T Consensus 432 ~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~ 463 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEK 463 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHH
Confidence 333332 57778888877753 6666643
No 17
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=87.71 E-value=0.1 Score=46.49 Aligned_cols=41 Identities=22% Similarity=0.104 Sum_probs=31.9
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS 367 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~ 367 (479)
.+..+.++.+.+++.|.-.......++|||.+|| |||.++.
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~ 129 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE 129 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCC
Confidence 4577889999999987643334568999999998 7888775
No 18
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=86.01 E-value=1.1 Score=46.79 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=58.3
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEe-------eCCc-------cCCCCCCCCCCcEEEEEeCCCcC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIV-------SDSI-------ELPFEDVIDYRKIAVFVETSAAT 391 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIi-------sd~~-------~lPF~~~iDw~~fSV~I~e~dv~ 391 (479)
.+..+.|+.+..++.|.-. .....+.|||.+|+ |||. ++.- -+| +++.- +.+++.
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~~--e~v~~-------~~~~la 513 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGLD--EMNVA-------DDAAFV 513 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTCG--GGBCS-------SHHHHH
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCCh--hhhcC-------CHHHHH
Confidence 3567889999988888755 45568999999996 9998 5432 222 12211 111111
Q ss_pred CcccHHHHHccCCHHHHHHHHHHHHhHh---hcceecCCCchHHHHHHHH
Q 011685 392 KPGFLISTLRAVTPDRILEYQRELKKVQ---RYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 392 ~~~~l~~iL~~Is~e~i~~Mr~~l~~v~---~~f~Y~~p~~a~~~il~~l 438 (479)
+ .|.+++. .++...+|+++.++.. +.|.|..-...+..+.+.+
T Consensus 514 ~--~i~~l~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 514 A--KAVALAS--DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp H--HHHHHHH--CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred H--HHHHHhc--CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 0 1333333 5777889998887754 7777754333344444433
No 19
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=85.69 E-value=0.33 Score=48.73 Aligned_cols=93 Identities=16% Similarity=0.190 Sum_probs=62.5
Q ss_pred HhHHhhccCCCcEEEec-CCC------CCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHH
Q 011685 325 RRAATQGMHTSKFCLNP-AGD------TPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLI 397 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P-~Gd------s~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~ 397 (479)
.++..+.++++.|+|+. .|. ......++|+|++|+ |||.++.-.++ +++.=....+.++ ++. .+.
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~~~--~~v~~~~~G~~~~--~~~---e~~ 295 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIANQ--ELIENNGLGWIVK--DVE---EAI 295 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCTTT--HHHHHHTCEEEES--SHH---HHH
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChhHH--HHHHhCCeEEEeC--CHH---HHH
Confidence 45667778789999997 110 012347999999996 99988754332 2222233445453 222 377
Q ss_pred HHHccCCHHHHHHHHHHHHhHhhcceec
Q 011685 398 STLRAVTPDRILEYQRELKKVQRYFIYD 425 (479)
Q Consensus 398 ~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~ 425 (479)
+.|..++++++.+|+++.++..+.+...
T Consensus 296 ~~i~~l~~~~~~~m~~na~~~a~~~~~~ 323 (339)
T 3rhz_A 296 MKVKNVNEDEYIELVKNVRSFNPILRKG 323 (339)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTHHHHTT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhcc
Confidence 7888899999999999999987766543
No 20
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=79.51 E-value=2.7 Score=44.68 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=59.5
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCC-C-CCcEEE--------EEeCCCcCCc-cc
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVI-D-YRKIAV--------FVETSAATKP-GF 395 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~i-D-w~~fSV--------~I~e~dv~~~-~~ 395 (479)
...+.++.+.+.+.|.=..+...-+.|||.+||.+| .++---+| ++| | -+.|.+ .++..|.... ..
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~~gG~~--e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~a 470 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CASTGGLV--DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAAT 470 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECSCTHHH--HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcCCCCch--heeeCCCCccccccCCCceeEECCCCHHHHHHH
Confidence 345678889988888755566678999999998555 45421111 111 1 111211 1222221110 01
Q ss_pred HHHHHccCCHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHH
Q 011685 396 LISTLRAVTPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREV 438 (479)
Q Consensus 396 l~~iL~~Is~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l 438 (479)
|.+.|.-..++++.+|+++. +.+.|+|......+..+.++|
T Consensus 471 i~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 471 LKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Confidence 33344444666778887765 467899976545555666555
No 21
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=79.41 E-value=0.72 Score=47.21 Aligned_cols=97 Identities=11% Similarity=0.047 Sum_probs=52.8
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccCC
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAVT 404 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is 404 (479)
..+..+.++.+..++.|.=......-++|||++|| |||..+. -. .++++-..-.+.++..|... +.+.|..+-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g~--~e~v~~~~~G~lv~~~d~~~---la~ai~~ll 377 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-EN--KDLSNWHSNIVSLEQLNPEN---IAETLVELC 377 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-TT--BCGGGTBTTEEEESSCSHHH---HHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-Cc--chhhhcCCCEEEeCCCCHHH---HHHHHHHHH
Confidence 45678889999988888532222456899999998 7776543 22 34454444566677666432 444333331
Q ss_pred -HHHHHHHHHHHHhHhhcceecCCCch
Q 011685 405 -PDRILEYQRELKKVQRYFIYDHPNGA 430 (479)
Q Consensus 405 -~e~i~~Mr~~l~~v~~~f~Y~~p~~a 430 (479)
+.+..+ + +.+.....|.|..-.+.
T Consensus 378 ~~~~~~~-~-~~~~~~~~~~W~~~~~~ 402 (413)
T 2x0d_A 378 MSFNNRD-V-DKKESSNMMFYINEFNE 402 (413)
T ss_dssp HHTC---------CCBSCGGGCCCC--
T ss_pred cCHHHHH-H-hHHHHHHhCCHHHHHHH
Confidence 112111 1 33334457888765444
No 22
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=73.85 E-value=3 Score=46.84 Aligned_cols=97 Identities=10% Similarity=0.062 Sum_probs=58.2
Q ss_pred HHhhccC-CCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHHHcc--
Q 011685 327 AATQGMH-TSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLISTLRA-- 402 (479)
Q Consensus 327 ~y~~~l~-~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~iL~~-- 402 (479)
+..+.++ .+..++.|.=.......+.|||++|| |||.++.--. .+++.-..-.+.++..|..... .|.++|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG~--~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGGP--AEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBTH--HHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCCh--HHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 4455555 45566777544445678999999998 8888764322 2233333345666665533200 12222221
Q ss_pred CCHHHHHHHHHHHHhH-hhcceecC
Q 011685 403 VTPDRILEYQRELKKV-QRYFIYDH 426 (479)
Q Consensus 403 Is~e~i~~Mr~~l~~v-~~~f~Y~~ 426 (479)
-.++...+|.++.++. ..+|.|..
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 1678888999888875 58888864
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=66.54 E-value=1.9 Score=41.99 Aligned_cols=95 Identities=14% Similarity=0.061 Sum_probs=52.3
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--C
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV--T 404 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--s 404 (479)
+..+.|+.+.+++.|.| .-+.|||.+|+ |||.++..-- ..++++-. ..+.++. +.. .|.+.|..+ .
T Consensus 275 ~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~~-~~e~v~~g-~g~~v~~-d~~---~la~~i~~ll~~ 342 (375)
T 3beo_A 275 DFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTTE-RPEGIEAG-TLKLAGT-DEE---TIFSLADELLSD 342 (375)
T ss_dssp HHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCCS-CHHHHHTT-SEEECCS-CHH---HHHHHHHHHHHC
T ss_pred HHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCCC-CceeecCC-ceEEcCC-CHH---HHHHHHHHHHhC
Confidence 56788899999988862 23899999997 9998854211 12334333 4455543 322 243333332 4
Q ss_pred HHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHh
Q 011685 405 PDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQ 440 (479)
Q Consensus 405 ~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~ 440 (479)
++...+|.++.+. |.. ..+.+.+.+.+.+
T Consensus 343 ~~~~~~~~~~~~~------~~~-~~~~~~i~~~~~~ 371 (375)
T 3beo_A 343 KEAHDKMSKASNP------YGD-GRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHCCCCCT------TCC-SCHHHHHHHHHHH
T ss_pred hHhHhhhhhcCCC------CCC-CcHHHHHHHHHHH
Confidence 5555555544322 111 3455555555544
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=64.03 E-value=1.5 Score=43.00 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=54.3
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcccHHHHHccC--
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPGFLISTLRAV-- 403 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 403 (479)
.+..+.|+.+...+.|.|- -+.|||.+|+ |||.++..- -..++++-. ..+.++. +.. .|.+.+..+
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~-----~~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~---~la~~i~~ll~ 341 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG-----IQEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQ---RIVEEVTRLLK 341 (384)
T ss_dssp HHHHHHHHHCSEEEESSST-----GGGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHH---HHHHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECCcc-----hHHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHH---HHHHHHHHHHh
Confidence 4567788888888888632 2789999997 999887521 112233323 4556654 322 244333332
Q ss_pred CHHHHHHHHHHHHhHhhcceecCCCchHHHHHHHHHh
Q 011685 404 TPDRILEYQRELKKVQRYFIYDHPNGAVNEIWREVSQ 440 (479)
Q Consensus 404 s~e~i~~Mr~~l~~v~~~f~Y~~p~~a~~~il~~l~~ 440 (479)
.++...+|.++.+. |. ...+.+.+.+.+.+
T Consensus 342 d~~~~~~~~~~~~~------~~-~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 342 DENEYQAMSRAHNP------YG-DGQACSRILEALKN 371 (384)
T ss_dssp CHHHHHHHHSSCCT------TC-CSCHHHHHHHHHHH
T ss_pred ChHHHhhhhhccCC------Cc-CCCHHHHHHHHHHH
Confidence 56666666654322 22 23455556665544
No 25
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=61.90 E-value=3.4 Score=45.58 Aligned_cols=104 Identities=9% Similarity=0.073 Sum_probs=63.8
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCCCCCCCC------cEEEEEeCCCcCCc----cc
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFEDVIDYR------KIAVFVETSAATKP----GF 395 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~~~iDw~------~fSV~I~e~dv~~~----~~ 395 (479)
.++.+.++.+...+.|.=..+...-..|||++|+ |||.++---++ +-+.|.. ...+.|+..+.... ..
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~-d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG-SYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH-HHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh-hhhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 3678889999999999755667778999999997 66666642111 0001111 12344432211111 12
Q ss_pred HHHHHc---cCCHHHHHHHHHHHHhHhhcceecCCCchH
Q 011685 396 LISTLR---AVTPDRILEYQRELKKVQRYFIYDHPNGAV 431 (479)
Q Consensus 396 l~~iL~---~Is~e~i~~Mr~~l~~v~~~f~Y~~p~~a~ 431 (479)
|.+.|. .-++++..+|+++.+++...|.|..-...+
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Y 626 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEY 626 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 444443 236888899999998888899998543333
No 26
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=44.89 E-value=18 Score=37.82 Aligned_cols=94 Identities=11% Similarity=-0.016 Sum_probs=55.6
Q ss_pred HhHHhhccCCCcEEEecCCCCCCcchHHHHHHhcc----eeEEeeCCccCCCCCCCCCCcEEEEEeCCCcCCcc-cHHHH
Q 011685 325 RRAATQGMHTSKFCLNPAGDTPSACRLFDAIVSLC----VPVIVSDSIELPFEDVIDYRKIAVFVETSAATKPG-FLIST 399 (479)
Q Consensus 325 ~~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGC----IPVIisd~~~lPF~~~iDw~~fSV~I~e~dv~~~~-~l~~i 399 (479)
..+....++.+.-|+.|.=.....--..|||++|+ -|||+++..-.. +.++ . .+.|+..|..... .|.++
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~--~~l~-~--g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA--NELT-S--ALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG--GTCT-T--SEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH--HHhC-C--eEEECCCCHHHHHHHHHHH
Confidence 34667788888877776533223457999999998 688988743211 1223 2 4566665543211 13444
Q ss_pred HccCCHHHHHHHHHHHHhHhhccee
Q 011685 400 LRAVTPDRILEYQRELKKVQRYFIY 424 (479)
Q Consensus 400 L~~Is~e~i~~Mr~~l~~v~~~f~Y 424 (479)
|. .++++..+|.+++++....+.+
T Consensus 417 L~-~~~~~r~~~~~~~~~~v~~~s~ 440 (482)
T 1uqt_A 417 LT-MSLAERISRHAEMLDVIVKNDI 440 (482)
T ss_dssp HT-CCHHHHHHHHHHHHHHHHHTCH
T ss_pred Hc-CCHHHHHHHHHHHHHHHHhCCH
Confidence 43 2566676777666665444554
No 27
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=44.76 E-value=21 Score=30.68 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=44.9
Q ss_pred hcc--CCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCC-CCCCCCCcEEEEEeCCCcCCcccHHHHHccCCH
Q 011685 330 QGM--HTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPF-EDVIDYRKIAVFVETSAATKPGFLISTLRAVTP 405 (479)
Q Consensus 330 ~~l--~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF-~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~ 405 (479)
+.| ..+...++..|. ..+.||+.+| +|+|+.+.. +.+. ...+......+.++.+++. ...|.+.++.+-.
T Consensus 80 ~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~-~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 80 DLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS-STDLLNALKRVIN 153 (170)
T ss_dssp HHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC-HHHHHHHHHHHHH
T ss_pred HHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCC-HHHHHHHHHHHHc
Confidence 445 777777776664 3699999999 688887542 1110 1123334567777765432 1234444443311
Q ss_pred HHHHHHHHHHHhHhh
Q 011685 406 DRILEYQRELKKVQR 420 (479)
Q Consensus 406 e~i~~Mr~~l~~v~~ 420 (479)
+ .+|+++.+++..
T Consensus 154 ~--~~~~~~a~~~~~ 166 (170)
T 2o6l_A 154 D--PSYKENVMKLSR 166 (170)
T ss_dssp C--HHHHHHHHHHC-
T ss_pred C--HHHHHHHHHHHH
Confidence 1 136666666543
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=41.84 E-value=18 Score=35.82 Aligned_cols=85 Identities=8% Similarity=0.101 Sum_probs=53.5
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCccCCCC------CCCCCCcEEEEEeCCCcCCcccHHHHHc
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSIELPFE------DVIDYRKIAVFVETSAATKPGFLISTLR 401 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~~lPF~------~~iDw~~fSV~I~e~dv~~~~~l~~iL~ 401 (479)
..+.|+.+..+++-.|. ..+.|++.+|. |+|+-+.-.-.-. ..+--....+.|+++++. ...|.+.|.
T Consensus 246 m~~~l~~aDlvI~raG~----~Tv~E~~a~G~-P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~-~~~L~~~i~ 319 (365)
T 3s2u_A 246 MAAAYAWADLVICRAGA----LTVSELTAAGL-PAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTG-AAELAAQLS 319 (365)
T ss_dssp HHHHHHHCSEEEECCCH----HHHHHHHHHTC-CEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCC-HHHHHHHHH
T ss_pred hhhhhccceEEEecCCc----chHHHHHHhCC-CeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCC-HHHHHHHHH
Confidence 45678889998887763 35899999997 8876432100000 012335568889887753 223444444
Q ss_pred cC--CHHHHHHHHHHHHhH
Q 011685 402 AV--TPDRILEYQRELKKV 418 (479)
Q Consensus 402 ~I--s~e~i~~Mr~~l~~v 418 (479)
.+ .++.+.+|.++.+.+
T Consensus 320 ~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 320 EVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHCTHHHHHHHHHHHHT
T ss_pred HHHCCHHHHHHHHHHHHhc
Confidence 43 578899999988875
No 29
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.62 E-value=34 Score=26.23 Aligned_cols=26 Identities=31% Similarity=0.331 Sum_probs=20.2
Q ss_pred ccccCCCceEEEecCCcccchhHHhh
Q 011685 86 IEFKSSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 86 ~~~p~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
+..+.....|||-+||+..+.+-|++
T Consensus 10 ~~~~~~~~~l~V~nlp~~~t~~~l~~ 35 (94)
T 2e5h_A 10 GGLAPSKSTVYVSNLPFSLTNNDLYR 35 (94)
T ss_dssp CSCCCCTTSEEEESCCTTSCHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHH
Confidence 33445667899999999999887764
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=29.89 E-value=18 Score=35.60 Aligned_cols=88 Identities=5% Similarity=0.001 Sum_probs=48.7
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCC-CCCCCCCcEEEEEeCCCcCCcccHHHHHccC-
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPF-EDVIDYRKIAVFVETSAATKPGFLISTLRAV- 403 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF-~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~I- 403 (479)
+..+.|..+...++..|.+ .+.||+.+|+ |||+.+.. +.+. .+.+.-....+.++..++. ...|.+.|+.+
T Consensus 301 ~~~~~l~~ad~~v~~~g~~----t~~Ea~a~G~-P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~-~~~l~~ai~~ll 374 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGSG----TTLGALGAGV-PQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS-PDSVSGAAKRLL 374 (412)
T ss_dssp CHHHHGGGCSEEEESCCHH----HHHHHHHHTC-CEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC-HHHHHHHHHHHH
T ss_pred CHHHHHhcCcEEEECCchH----HHHHHHHhCC-CEEecCCchhHHHHHHHHHHcCCEEecCcccCC-HHHHHHHHHHHH
Confidence 3567888899888876642 5899999995 88885321 0000 0112223456666654321 11244333332
Q ss_pred -CHHHHHHHHHHHHhHhh
Q 011685 404 -TPDRILEYQRELKKVQR 420 (479)
Q Consensus 404 -s~e~i~~Mr~~l~~v~~ 420 (479)
.++...+|.+..+.+..
T Consensus 375 ~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 375 AEESYRAGARAVAAEIAA 392 (412)
T ss_dssp HCHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHhc
Confidence 45666666666665544
No 31
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=26.37 E-value=28 Score=34.84 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=32.6
Q ss_pred hHHhhccCCCcEEEecCCCCCCcchHHHHH-------HhcceeEEeeCC
Q 011685 326 RAATQGMHTSKFCLNPAGDTPSACRLFDAI-------VSLCVPVIVSDS 367 (479)
Q Consensus 326 ~~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi-------~aGCIPVIisd~ 367 (479)
.+..+.++.+..++.|.-.......+.||| ++|+ |||.++.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh
Confidence 467788999999998865444556799999 9995 9998876
No 32
>2fc9_A NCL protein; structure genomics, RRM_1 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.45 E-value=60 Score=25.25 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=20.1
Q ss_pred cccCCCceEEEecCCcccchhHHhh
Q 011685 87 EFKSSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 87 ~~p~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
..+.....|||-+||+..+.+-|++
T Consensus 10 ~~~~~~~~l~V~nLp~~~t~~~l~~ 34 (101)
T 2fc9_A 10 TWSGESKTLVLSNLSYSATEETLQE 34 (101)
T ss_dssp CCSCCCSEEEEESCCTTCCHHHHHH
T ss_pred cCCCCCCEEEEeCCCCCCCHHHHHH
Confidence 3445568899999999999987774
No 33
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=23.97 E-value=3.7e+02 Score=25.88 Aligned_cols=85 Identities=9% Similarity=0.096 Sum_probs=47.9
Q ss_pred HHhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCC-ccCCC-C--CCCCCCcEEEEEeCCCcCCcccHHHHHcc
Q 011685 327 AATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDS-IELPF-E--DVIDYRKIAVFVETSAATKPGFLISTLRA 402 (479)
Q Consensus 327 ~y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~-~~lPF-~--~~iDw~~fSV~I~e~dv~~~~~l~~iL~~ 402 (479)
...++|..+...+...|.+ .+.||+.+|. |||+-.. .+.+. . +.+......+.++..+.. ...|.++|.
T Consensus 292 ~~~~ll~~ad~~v~~~G~~----t~~Eal~~G~-P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~-~~~l~~ll~- 364 (398)
T 3oti_A 292 PLHTLLRTCTAVVHHGGGG----TVMTAIDAGI-PQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVD-ADLLRRLIG- 364 (398)
T ss_dssp CHHHHHTTCSEEEECCCHH----HHHHHHHHTC-CEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCC-HHHHHHHHH-
T ss_pred CHHHHHhhCCEEEECCCHH----HHHHHHHhCC-CEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCC-HHHHHHHHc-
Confidence 3567788888877766643 5899999995 8887432 11121 1 112223456777665432 123555554
Q ss_pred CCHHHHHHHHHHHHhHh
Q 011685 403 VTPDRILEYQRELKKVQ 419 (479)
Q Consensus 403 Is~e~i~~Mr~~l~~v~ 419 (479)
.++..++|++..+.+.
T Consensus 365 -~~~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 365 -DESLRTAAREVREEMV 380 (398)
T ss_dssp -CHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 3555555655555543
No 34
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=23.90 E-value=28 Score=34.69 Aligned_cols=85 Identities=13% Similarity=0.067 Sum_probs=49.8
Q ss_pred hhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCC-CCCCCCCcEEEEEeCCCcCCcccHHHHHccCCHH
Q 011685 329 TQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPF-EDVIDYRKIAVFVETSAATKPGFLISTLRAVTPD 406 (479)
Q Consensus 329 ~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF-~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~e 406 (479)
.++|..+...++..|. -.+.||+.+| +|+|+.+.. ++++ ...+......+.++.+++. ...|.+.++.+ .+
T Consensus 296 ~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~-~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 296 QVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMADQPYYAGRVAELGVGVAHDGPIPT-FDSLSAALATA-LT 368 (415)
T ss_dssp HHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC-HHHHHHHHHHH-TS
T ss_pred HHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCCccHHHHHHHHHCCCcccCCcCCCC-HHHHHHHHHHH-cC
Confidence 5667888888887665 3699999999 587776431 1111 0123334567777655432 23466667666 32
Q ss_pred HHHHHHHHHHhHhhcc
Q 011685 407 RILEYQRELKKVQRYF 422 (479)
Q Consensus 407 ~i~~Mr~~l~~v~~~f 422 (479)
.+++++.+++.+.+
T Consensus 369 --~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 369 --PETHARATAVAGTI 382 (415)
T ss_dssp --HHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHH
Confidence 34555565554444
No 35
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.69 E-value=56 Score=24.92 Aligned_cols=25 Identities=8% Similarity=-0.025 Sum_probs=19.7
Q ss_pred cccCCCceEEEecCCcccchhHHhh
Q 011685 87 EFKSSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 87 ~~p~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
..+.....|||-+||+..+.+-|++
T Consensus 10 ~~~~~~~~l~v~nlp~~~t~~~l~~ 34 (95)
T 2cqc_A 10 ANPDPNCCLGVFGLSLYTTERDLRE 34 (95)
T ss_dssp CSCCGGGCEEEESCCSSCCHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHH
Confidence 3445567899999999999877764
No 36
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=21.59 E-value=1.8e+02 Score=28.55 Aligned_cols=86 Identities=10% Similarity=0.047 Sum_probs=48.9
Q ss_pred HhhccCCCcEEEecCCCCCCcchHHHHHHhcceeEEeeCCc-cCCC-CCCCCCCcEEEEEeCCCcCCcccHHHHHccCCH
Q 011685 328 ATQGMHTSKFCLNPAGDTPSACRLFDAIVSLCVPVIVSDSI-ELPF-EDVIDYRKIAVFVETSAATKPGFLISTLRAVTP 405 (479)
Q Consensus 328 y~~~l~~S~FCL~P~Gds~ts~Rl~DAi~aGCIPVIisd~~-~lPF-~~~iDw~~fSV~I~e~dv~~~~~l~~iL~~Is~ 405 (479)
..++|.++...++-.|.+ .+.||+.+| +|+|+-... +.++ ...+......+.++..++. ...|.+.++.+-.
T Consensus 278 ~~~ll~~~d~~v~~gG~~----t~~Eal~~G-vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~-~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 278 HQVLFGRVAAVVHHGGAG----TTTAVTRAG-APQVVVPQKADQPYYAGRVADLGVGVAHDGPTPT-VESLSAALATALT 351 (404)
T ss_dssp HHHHGGGSSEEEECCCHH----HHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC-HHHHHHHHHHHTS
T ss_pred HHHHHhhCcEEEECCcHH----HHHHHHHcC-CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCC-HHHHHHHHHHHhC
Confidence 467788899888887754 589999998 688875321 1111 0113344556667654432 2235544444322
Q ss_pred HHHHHHHHHHHhHhhcc
Q 011685 406 DRILEYQRELKKVQRYF 422 (479)
Q Consensus 406 e~i~~Mr~~l~~v~~~f 422 (479)
.+++++.+++...+
T Consensus 352 ---~~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 352 ---PGIRARAAAVAGTI 365 (404)
T ss_dssp ---HHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHHHHHH
Confidence 24566666665544
No 37
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.20 E-value=82 Score=24.38 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=19.0
Q ss_pred cCCCceEEEecCCcccchhHHhh
Q 011685 89 KSSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 89 p~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
......|||-+||+..+.+-|++
T Consensus 12 ~~~~~~l~V~nlp~~~t~~~l~~ 34 (99)
T 2cpj_A 12 FTQRSRLFVGNLPPDITEEEMRK 34 (99)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHH
T ss_pred CCCCCEEEEeCCCCCCCHHHHHH
Confidence 35567899999999999987774
No 38
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.53 E-value=85 Score=24.29 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=18.2
Q ss_pred CCCceEEEecCCcccchhHHhh
Q 011685 90 SSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 90 ~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
.....|||-+||+..+.+-|++
T Consensus 15 ~~~~~l~v~nlp~~~t~~~l~~ 36 (100)
T 2do4_A 15 LEKHKLFISGLPFSCTKEELEE 36 (100)
T ss_dssp CCCSCEEEESCCTTCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHH
Confidence 4567899999999999887764
No 39
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=20.26 E-value=86 Score=24.95 Aligned_cols=25 Identities=20% Similarity=0.218 Sum_probs=20.0
Q ss_pred cccCCCceEEEecCCcccchhHHhh
Q 011685 87 EFKSSKVKVYMYNLPRKFTYGIIEQ 111 (479)
Q Consensus 87 ~~p~~~~~IYVYdLP~~Fn~~ll~~ 111 (479)
..+.....|||-+||...+.+-|++
T Consensus 10 ~~~~~~~~l~V~nlp~~~t~~~l~~ 34 (115)
T 2dgo_A 10 KDTSNHFHVFVGDLSPEITTEDIKA 34 (115)
T ss_dssp CCSTTCEEEEEESCCTTCCHHHHHH
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHH
Confidence 3445678899999999999887774
Done!