Query 011687
Match_columns 479
No_of_seqs 122 out of 1273
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 13:17:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011687.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011687hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 6.4E-65 2.2E-69 509.7 39.0 435 3-457 6-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9E-62 3.1E-66 496.5 39.3 439 8-457 6-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 9.8E-59 3.3E-63 472.6 42.2 435 6-458 2-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.7E-58 5.8E-63 467.8 38.8 430 9-457 6-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 8.9E-57 3E-61 456.4 35.8 430 9-457 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.2E-44 4.3E-49 365.1 33.6 382 8-438 10-406 (424)
7 1iir_A Glycosyltransferase GTF 100.0 1.7E-43 5.7E-48 355.7 29.9 385 11-468 1-407 (415)
8 4amg_A Snogd; transferase, pol 100.0 1.3E-43 4.6E-48 354.6 26.6 342 9-438 21-385 (400)
9 1rrv_A Glycosyltransferase GTF 100.0 3.1E-42 1.1E-46 346.6 28.6 380 11-468 1-408 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 4.1E-41 1.4E-45 336.8 26.9 351 11-437 1-367 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 3.9E-39 1.3E-43 323.9 35.2 362 9-438 19-398 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.8E-38 6.3E-43 317.4 36.0 373 10-454 4-395 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 7.7E-38 2.6E-42 316.0 34.0 377 9-461 6-399 (430)
14 2p6p_A Glycosyl transferase; X 100.0 1.5E-38 5.2E-43 316.3 26.6 354 11-462 1-380 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 2E-38 6.7E-43 321.3 27.8 358 9-438 19-420 (441)
16 4fzr_A SSFS6; structural genom 100.0 7.9E-36 2.7E-40 298.1 22.7 341 8-438 13-385 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.2E-35 7.5E-40 294.9 25.2 334 9-438 19-382 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.3E-34 4.5E-39 288.6 24.0 338 10-438 1-373 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 7.7E-32 2.6E-36 270.3 30.4 343 8-438 18-393 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6E-29 2E-33 244.8 28.4 335 10-461 2-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3E-27 1E-31 207.0 16.8 162 264-437 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.1E-20 3.6E-25 185.9 28.6 317 10-437 6-339 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.7E-15 5.9E-20 141.6 19.4 262 11-405 1-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.9E-15 1E-19 134.4 10.3 134 276-418 25-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 3.4E-11 1.1E-15 120.9 31.5 375 8-462 18-428 (438)
26 3okp_A GDP-mannose-dependent a 99.5 3.4E-12 1.2E-16 126.1 23.2 356 9-465 3-385 (394)
27 1v4v_A UDP-N-acetylglucosamine 99.5 7.2E-12 2.5E-16 123.3 22.1 139 278-430 197-343 (376)
28 2gek_A Phosphatidylinositol ma 99.4 2.8E-11 9.5E-16 120.1 23.9 351 8-464 18-388 (406)
29 3dzc_A UDP-N-acetylglucosamine 99.4 1.3E-12 4.4E-17 129.5 13.6 326 8-429 23-375 (396)
30 3ot5_A UDP-N-acetylglucosamine 99.4 5.2E-12 1.8E-16 125.3 16.9 327 7-429 24-369 (403)
31 1vgv_A UDP-N-acetylglucosamine 99.4 1.6E-11 5.3E-16 121.1 20.2 138 278-428 204-349 (384)
32 3fro_A GLGA glycogen synthase; 99.4 1E-10 3.4E-15 117.2 25.2 388 9-461 1-432 (439)
33 2iw1_A Lipopolysaccharide core 99.3 5.9E-11 2E-15 116.4 20.3 142 278-433 194-349 (374)
34 2iuy_A Avigt4, glycosyltransfe 99.3 6.1E-11 2.1E-15 115.0 19.7 155 282-462 164-338 (342)
35 2r60_A Glycosyl transferase, g 99.3 3.6E-10 1.2E-14 115.5 26.3 167 281-461 263-461 (499)
36 3beo_A UDP-N-acetylglucosamine 99.3 8.2E-11 2.8E-15 115.5 19.6 139 278-427 204-348 (375)
37 2jjm_A Glycosyl transferase, g 99.3 1.8E-09 6E-14 106.8 28.3 353 11-461 16-387 (394)
38 2x6q_A Trehalose-synthase TRET 99.2 1.8E-08 6.2E-13 100.2 27.2 85 336-429 293-387 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 2.6E-09 9E-14 104.9 13.8 320 11-425 10-346 (385)
40 1rzu_A Glycogen synthase 1; gl 98.9 8.9E-08 3E-12 97.3 22.8 163 281-463 292-479 (485)
41 2qzs_A Glycogen synthase; glyc 98.9 1.5E-07 5E-12 95.7 22.3 163 279-461 291-478 (485)
42 3oy2_A Glycosyltransferase B73 98.8 2.8E-07 9.4E-12 91.5 21.3 113 338-461 256-392 (413)
43 3s28_A Sucrose synthase 1; gly 98.8 1.9E-07 6.5E-12 99.5 19.3 141 279-430 571-743 (816)
44 2vsy_A XCC0866; transferase, g 98.7 1.4E-05 4.6E-10 82.8 29.2 120 336-460 434-560 (568)
45 2f9f_A First mannosyl transfer 98.6 2.6E-07 8.7E-12 80.3 11.5 141 281-433 24-175 (177)
46 2hy7_A Glucuronosyltransferase 98.6 1.8E-05 6.1E-10 78.3 25.4 116 281-423 223-354 (406)
47 2xci_A KDO-transferase, 3-deox 98.1 0.00012 4E-09 71.5 17.8 92 337-434 261-362 (374)
48 3qhp_A Type 1 capsular polysac 97.8 5.2E-05 1.8E-09 64.4 8.9 136 280-429 2-148 (166)
49 2bfw_A GLGA glycogen synthase; 97.8 0.00018 6.2E-09 63.1 12.0 85 337-429 96-189 (200)
50 4gyw_A UDP-N-acetylglucosamine 97.7 0.00064 2.2E-08 72.0 16.2 154 277-437 520-685 (723)
51 3q3e_A HMW1C-like glycosyltran 97.6 0.00095 3.3E-08 68.1 14.4 143 279-430 440-597 (631)
52 3tov_A Glycosyl transferase fa 97.3 0.013 4.3E-07 56.4 17.9 105 9-133 7-115 (349)
53 1psw_A ADP-heptose LPS heptosy 97.2 0.031 1.1E-06 53.3 19.8 103 11-133 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 96.9 0.0022 7.7E-08 61.3 8.4 95 336-437 214-322 (339)
55 2x0d_A WSAF; GT4 family, trans 96.4 0.0016 5.3E-08 64.4 3.7 84 336-427 295-385 (413)
56 3vue_A GBSS-I, granule-bound s 94.1 0.14 4.8E-06 52.1 9.0 164 278-460 325-512 (536)
57 3nb0_A Glycogen [starch] synth 90.5 2.6 9E-05 43.5 12.6 78 336-419 490-592 (725)
58 1uqt_A Alpha, alpha-trehalose- 89.7 7.3 0.00025 38.7 15.1 107 338-459 333-454 (482)
59 2phj_A 5'-nucleotidase SURE; S 86.5 2.2 7.7E-05 38.1 8.0 113 11-136 2-127 (251)
60 1g5t_A COB(I)alamin adenosyltr 86.4 3.3 0.00011 35.5 8.8 97 10-117 28-130 (196)
61 4dzz_A Plasmid partitioning pr 86.2 2.4 8.3E-05 36.3 8.2 80 12-115 3-83 (206)
62 3qxc_A Dethiobiotin synthetase 84.2 2.2 7.6E-05 38.1 7.0 37 10-46 20-58 (242)
63 3qjg_A Epidermin biosynthesis 83.9 1.1 3.8E-05 37.8 4.5 43 11-54 6-48 (175)
64 2wqk_A 5'-nucleotidase SURE; S 82.6 3.6 0.00012 36.9 7.6 112 11-135 2-126 (251)
65 2x0d_A WSAF; GT4 family, trans 82.1 0.54 1.8E-05 46.0 2.2 40 9-48 45-89 (413)
66 3t5t_A Putative glycosyltransf 82.0 9.4 0.00032 38.0 11.1 110 337-460 353-474 (496)
67 3zqu_A Probable aromatic acid 81.5 1.3 4.4E-05 38.6 4.1 44 10-54 4-47 (209)
68 3vue_A GBSS-I, granule-bound s 81.2 1.2 4E-05 45.3 4.3 39 9-47 8-52 (536)
69 3q0i_A Methionyl-tRNA formyltr 80.0 5.8 0.0002 37.0 8.4 35 8-47 5-39 (318)
70 3auf_A Glycinamide ribonucleot 78.7 9.6 0.00033 33.6 9.0 104 9-137 21-132 (229)
71 2ywr_A Phosphoribosylglycinami 77.4 8.9 0.00031 33.4 8.3 102 11-137 2-111 (216)
72 2gt1_A Lipopolysaccharide hept 77.1 1.6 5.6E-05 40.8 3.7 45 11-55 1-47 (326)
73 1kjn_A MTH0777; hypotethical p 76.2 2.8 9.6E-05 33.8 4.2 46 9-54 5-52 (157)
74 3dfu_A Uncharacterized protein 76.2 9 0.00031 33.8 8.0 34 9-47 5-38 (232)
75 2bw0_A 10-FTHFDH, 10-formyltet 75.9 7 0.00024 36.6 7.7 101 10-138 22-131 (329)
76 3fgn_A Dethiobiotin synthetase 75.8 3.4 0.00012 37.1 5.3 123 10-138 25-167 (251)
77 1p3y_1 MRSD protein; flavoprot 75.6 1.2 4.2E-05 38.3 2.1 44 9-53 7-50 (194)
78 3rg8_A Phosphoribosylaminoimid 75.3 13 0.00044 30.5 8.0 134 280-437 3-148 (159)
79 1sbz_A Probable aromatic acid 75.3 2.1 7.2E-05 36.9 3.5 43 11-54 1-44 (197)
80 3l7i_A Teichoic acid biosynthe 74.6 2.5 8.6E-05 44.6 4.7 114 342-464 605-726 (729)
81 1mvl_A PPC decarboxylase athal 74.5 3.7 0.00013 35.7 4.9 45 9-55 18-62 (209)
82 4b4k_A N5-carboxyaminoimidazol 73.9 31 0.001 28.8 10.0 137 279-438 22-173 (181)
83 3vot_A L-amino acid ligase, BL 73.3 17 0.00057 35.2 10.0 96 8-131 3-101 (425)
84 3lp6_A Phosphoribosylaminoimid 71.8 39 0.0013 28.0 10.2 138 278-438 6-156 (174)
85 3rfo_A Methionyl-tRNA formyltr 71.6 13 0.00045 34.5 8.3 33 10-47 4-36 (317)
86 1fmt_A Methionyl-tRNA FMet for 71.3 8.4 0.00029 35.8 6.9 97 9-138 2-113 (314)
87 3lqk_A Dipicolinate synthase s 71.3 4.6 0.00016 34.8 4.8 45 9-53 6-50 (201)
88 3ty2_A 5'-nucleotidase SURE; s 70.5 11 0.00037 33.8 7.1 46 6-53 7-52 (261)
89 1xmp_A PURE, phosphoribosylami 70.3 45 0.0015 27.6 10.1 139 278-438 10-162 (170)
90 3av3_A Phosphoribosylglycinami 69.6 22 0.00076 30.8 8.9 102 11-137 4-113 (212)
91 3dm5_A SRP54, signal recogniti 69.4 16 0.00053 35.8 8.6 42 10-51 100-141 (443)
92 1ccw_A Protein (glutamate muta 69.2 6.7 0.00023 31.4 5.1 38 10-47 3-40 (137)
93 2qs7_A Uncharacterized protein 69.2 4.5 0.00015 32.8 4.0 38 11-48 9-46 (144)
94 4grd_A N5-CAIR mutase, phospho 68.5 44 0.0015 27.6 9.7 139 277-438 10-163 (173)
95 3pdi_B Nitrogenase MOFE cofact 68.5 20 0.00069 35.2 9.3 87 10-134 313-399 (458)
96 3ors_A N5-carboxyaminoimidazol 67.8 38 0.0013 27.8 9.2 137 279-438 3-154 (163)
97 1qzu_A Hypothetical protein MD 67.8 3.9 0.00013 35.5 3.5 46 9-55 18-64 (206)
98 1jkx_A GART;, phosphoribosylgl 67.3 36 0.0012 29.4 9.7 102 11-137 1-110 (212)
99 2ejb_A Probable aromatic acid 66.9 5.8 0.0002 33.8 4.4 43 11-54 2-44 (189)
100 3igf_A ALL4481 protein; two-do 66.0 4.9 0.00017 38.5 4.2 36 11-46 2-38 (374)
101 1g63_A Epidermin modifying enz 65.1 5.8 0.0002 33.6 4.0 43 11-54 3-45 (181)
102 1id1_A Putative potassium chan 64.2 4.7 0.00016 32.8 3.3 34 9-47 2-35 (153)
103 3tqr_A Phosphoribosylglycinami 64.0 15 0.0005 32.0 6.5 104 9-137 4-114 (215)
104 3tqq_A Methionyl-tRNA formyltr 63.6 14 0.00049 34.2 6.8 33 10-47 2-34 (314)
105 3mcu_A Dipicolinate synthase, 63.5 6 0.00021 34.3 3.9 40 9-49 4-44 (207)
106 2iz6_A Molybdenum cofactor car 62.7 42 0.0014 28.0 8.9 75 340-419 93-172 (176)
107 3kuu_A Phosphoribosylaminoimid 62.5 64 0.0022 26.7 9.6 136 280-438 13-163 (174)
108 3tov_A Glycosyl transferase fa 62.0 19 0.00065 33.9 7.5 99 10-135 185-287 (349)
109 2b8t_A Thymidine kinase; deoxy 61.2 29 0.001 30.3 8.0 38 11-48 12-50 (223)
110 3un1_A Probable oxidoreductase 60.7 26 0.00088 31.2 7.9 35 10-47 27-61 (260)
111 4dim_A Phosphoribosylglycinami 60.6 16 0.00055 35.0 6.9 34 9-47 6-39 (403)
112 2i2c_A Probable inorganic poly 60.3 8.2 0.00028 35.0 4.4 51 353-420 36-92 (272)
113 2vo1_A CTP synthase 1; pyrimid 59.2 11 0.00036 33.9 4.6 41 9-49 21-64 (295)
114 3llv_A Exopolyphosphatase-rela 59.2 5.6 0.00019 31.7 2.8 34 10-48 6-39 (141)
115 4b4o_A Epimerase family protei 58.5 7.3 0.00025 35.6 3.9 32 11-46 1-32 (298)
116 4ds3_A Phosphoribosylglycinami 58.4 30 0.001 29.9 7.5 105 8-137 5-117 (209)
117 3oow_A Phosphoribosylaminoimid 58.1 77 0.0026 26.0 9.8 136 280-438 6-156 (166)
118 2q5c_A NTRC family transcripti 57.8 13 0.00043 31.9 5.0 30 352-384 51-80 (196)
119 3o1l_A Formyltetrahydrofolate 57.5 62 0.0021 29.7 9.8 104 9-137 104-212 (302)
120 4g81_D Putative hexonate dehyd 57.5 25 0.00085 31.5 7.1 35 10-47 8-42 (255)
121 3trh_A Phosphoribosylaminoimid 57.4 80 0.0028 26.0 10.3 139 279-438 6-157 (169)
122 2g1u_A Hypothetical protein TM 56.6 12 0.0004 30.4 4.4 38 6-48 15-52 (155)
123 3io3_A DEHA2D07832P; chaperone 56.5 20 0.00069 33.8 6.6 40 9-48 16-58 (348)
124 3mc3_A DSRE/DSRF-like family p 56.2 12 0.00042 29.6 4.4 39 10-48 15-56 (134)
125 3op4_A 3-oxoacyl-[acyl-carrier 56.0 14 0.00049 32.6 5.3 42 1-47 1-42 (248)
126 1psw_A ADP-heptose LPS heptosy 55.6 47 0.0016 30.7 9.1 98 11-134 181-286 (348)
127 2yxb_A Coenzyme B12-dependent 55.6 11 0.00039 31.0 4.1 39 9-47 17-55 (161)
128 2o6l_A UDP-glucuronosyltransfe 55.4 77 0.0026 25.5 9.5 92 10-136 20-114 (170)
129 3kcq_A Phosphoribosylglycinami 55.2 22 0.00075 30.9 6.1 98 10-137 8-113 (215)
130 1mio_A Nitrogenase molybdenum 54.8 22 0.00076 35.7 6.9 33 95-134 448-480 (533)
131 3ghy_A Ketopantoate reductase 54.7 7.5 0.00026 36.4 3.3 47 10-66 3-49 (335)
132 2q5c_A NTRC family transcripti 54.4 23 0.00079 30.2 6.1 42 93-138 129-170 (196)
133 3n0v_A Formyltetrahydrofolate 54.3 91 0.0031 28.3 10.4 105 8-137 88-197 (286)
134 3da8_A Probable 5'-phosphoribo 53.3 21 0.00072 31.0 5.6 106 8-137 10-120 (215)
135 1o4v_A Phosphoribosylaminoimid 53.3 99 0.0034 25.8 11.5 138 278-438 12-162 (183)
136 1y80_A Predicted cobalamin bin 52.6 18 0.00062 31.1 5.2 38 10-47 88-125 (210)
137 2vqe_B 30S ribosomal protein S 52.1 1.3E+02 0.0044 26.8 12.3 31 107-137 158-190 (256)
138 2bln_A Protein YFBG; transfera 51.9 17 0.0006 33.5 5.2 32 11-47 1-32 (305)
139 1meo_A Phosophoribosylglycinam 51.2 73 0.0025 27.4 8.8 102 11-137 1-110 (209)
140 2gt1_A Lipopolysaccharide hept 51.1 8.1 0.00028 35.9 2.9 129 278-421 177-322 (326)
141 3pdi_A Nitrogenase MOFE cofact 50.8 29 0.00098 34.4 6.9 90 10-134 332-425 (483)
142 3kjh_A CO dehydrogenase/acetyl 50.3 10 0.00035 33.3 3.3 38 11-48 1-38 (254)
143 3lk7_A UDP-N-acetylmuramoylala 50.2 17 0.00058 35.6 5.2 40 1-46 1-40 (451)
144 2r8r_A Sensor protein; KDPD, P 49.7 19 0.00065 31.6 4.7 38 10-47 6-43 (228)
145 3kvo_A Hydroxysteroid dehydrog 49.1 58 0.002 30.4 8.5 34 11-47 45-78 (346)
146 1dhr_A Dihydropteridine reduct 48.5 16 0.00054 32.1 4.2 36 9-47 5-40 (241)
147 3obi_A Formyltetrahydrofolate 48.4 1.4E+02 0.0048 27.1 10.6 105 8-137 87-197 (288)
148 2i2x_B MTAC, methyltransferase 48.3 24 0.00081 31.6 5.4 39 9-47 122-160 (258)
149 3gpi_A NAD-dependent epimerase 47.7 20 0.00069 32.2 4.9 33 10-47 3-35 (286)
150 3eag_A UDP-N-acetylmuramate:L- 47.6 17 0.00058 33.8 4.5 33 10-46 4-36 (326)
151 4gi5_A Quinone reductase; prot 47.5 26 0.00091 31.8 5.6 37 8-44 20-59 (280)
152 1qkk_A DCTD, C4-dicarboxylate 47.2 44 0.0015 26.4 6.5 50 373-424 74-124 (155)
153 4h15_A Short chain alcohol deh 46.8 26 0.00088 31.4 5.4 34 10-46 10-43 (261)
154 3nrb_A Formyltetrahydrofolate 46.5 1.7E+02 0.0057 26.5 11.5 108 8-137 86-196 (287)
155 2pju_A Propionate catabolism o 46.4 19 0.00067 31.5 4.3 29 353-384 64-92 (225)
156 2gk4_A Conserved hypothetical 46.3 13 0.00043 32.9 3.1 23 26-48 31-53 (232)
157 3hn2_A 2-dehydropantoate 2-red 46.2 21 0.0007 33.0 4.8 46 11-67 3-48 (312)
158 3ppi_A 3-hydroxyacyl-COA dehyd 46.0 20 0.00069 32.3 4.6 35 10-47 29-63 (281)
159 3bgw_A DNAB-like replicative h 45.7 21 0.00073 34.9 5.0 40 10-49 197-236 (444)
160 2r6j_A Eugenol synthase 1; phe 45.6 16 0.00055 33.5 4.0 32 12-47 13-44 (318)
161 1yt5_A Inorganic polyphosphate 44.6 18 0.00061 32.4 3.9 52 353-421 42-96 (258)
162 3lou_A Formyltetrahydrofolate 44.6 1.2E+02 0.004 27.6 9.5 105 8-137 93-202 (292)
163 3zzm_A Bifunctional purine bio 44.3 15 0.00052 36.1 3.5 51 9-69 8-58 (523)
164 3ot1_A 4-methyl-5(B-hydroxyeth 44.1 51 0.0018 28.1 6.8 37 10-47 9-45 (208)
165 1lss_A TRK system potassium up 44.0 16 0.00055 28.5 3.3 33 10-47 4-36 (140)
166 3sxp_A ADP-L-glycero-D-mannohe 43.7 37 0.0013 31.8 6.3 42 1-46 1-44 (362)
167 1bg6_A N-(1-D-carboxylethyl)-L 43.6 15 0.00051 34.5 3.5 33 10-47 4-36 (359)
168 3dhn_A NAD-dependent epimerase 43.0 43 0.0015 28.6 6.2 34 11-48 5-38 (227)
169 3u7q_B Nitrogenase molybdenum- 43.0 1.2E+02 0.0041 30.2 10.1 33 10-47 364-396 (523)
170 3qvl_A Putative hydantoin race 42.8 1.3E+02 0.0044 26.5 9.3 37 11-47 2-39 (245)
171 2hy5_A Putative sulfurtransfer 42.7 31 0.0011 27.0 4.7 38 11-48 1-42 (130)
172 4dll_A 2-hydroxy-3-oxopropiona 42.6 26 0.0009 32.4 4.9 34 9-47 30-63 (320)
173 3zq6_A Putative arsenical pump 42.6 27 0.00091 32.4 5.0 38 11-48 14-52 (324)
174 4e3z_A Putative oxidoreductase 42.1 27 0.00091 31.3 4.8 36 8-46 23-58 (272)
175 3lrx_A Putative hydrogenase; a 41.9 24 0.00082 28.8 4.0 35 10-47 23-57 (158)
176 2jk1_A HUPR, hydrogenase trans 41.4 64 0.0022 24.7 6.6 51 373-424 71-122 (139)
177 3n7t_A Macrophage binding prot 41.3 49 0.0017 29.3 6.3 39 10-48 9-58 (247)
178 3l4e_A Uncharacterized peptida 41.2 26 0.00089 30.2 4.3 45 269-314 18-62 (206)
179 1jx7_A Hypothetical protein YC 40.7 30 0.001 26.2 4.2 43 11-53 2-49 (117)
180 3qlj_A Short chain dehydrogena 40.6 1E+02 0.0035 28.2 8.7 33 11-46 27-59 (322)
181 3ezx_A MMCP 1, monomethylamine 40.5 34 0.0012 29.7 5.0 39 9-47 91-129 (215)
182 2c5m_A CTP synthase; cytidine 40.5 21 0.0007 31.9 3.4 40 10-49 22-64 (294)
183 2b4q_A Rhamnolipids biosynthes 40.2 41 0.0014 30.2 5.8 34 11-47 29-62 (276)
184 3qha_A Putative oxidoreductase 40.0 19 0.00066 32.9 3.5 33 10-47 15-47 (296)
185 3vps_A TUNA, NAD-dependent epi 39.9 18 0.00062 33.0 3.3 34 10-47 7-40 (321)
186 3kkl_A Probable chaperone prot 39.7 42 0.0014 29.7 5.6 38 11-48 4-52 (244)
187 2hmt_A YUAA protein; RCK, KTN, 39.7 15 0.00051 28.9 2.4 33 10-47 6-38 (144)
188 2xj4_A MIPZ; replication, cell 39.6 31 0.0011 31.2 4.9 37 12-48 6-43 (286)
189 4egb_A DTDP-glucose 4,6-dehydr 39.2 12 0.00041 34.9 1.9 40 2-45 16-55 (346)
190 3i83_A 2-dehydropantoate 2-red 39.1 21 0.0007 33.1 3.6 46 11-67 3-48 (320)
191 3nrc_A Enoyl-[acyl-carrier-pro 39.1 94 0.0032 27.7 8.1 36 11-48 26-62 (280)
192 3tri_A Pyrroline-5-carboxylate 39.1 1.3E+02 0.0044 27.0 8.9 33 10-47 3-38 (280)
193 3g0o_A 3-hydroxyisobutyrate de 39.0 15 0.00052 33.7 2.7 34 9-47 6-39 (303)
194 2r85_A PURP protein PF1517; AT 39.0 30 0.001 31.9 4.7 33 10-48 2-34 (334)
195 3p9x_A Phosphoribosylglycinami 38.8 1.6E+02 0.0055 25.3 8.9 102 11-137 3-112 (211)
196 1y1p_A ARII, aldehyde reductas 38.5 34 0.0012 31.4 5.1 41 3-47 4-44 (342)
197 2ew2_A 2-dehydropantoate 2-red 38.4 20 0.00068 32.8 3.3 33 10-47 3-35 (316)
198 3tjr_A Short chain dehydrogena 38.3 48 0.0016 30.1 6.0 34 11-47 31-64 (301)
199 2dpo_A L-gulonate 3-dehydrogen 38.2 19 0.00065 33.4 3.2 36 7-47 3-38 (319)
200 1rw7_A YDR533CP; alpha-beta sa 38.1 59 0.002 28.5 6.3 38 11-48 4-52 (243)
201 2lpm_A Two-component response 38.1 27 0.00093 27.2 3.6 28 107-134 53-85 (123)
202 2bru_C NAD(P) transhydrogenase 37.8 33 0.0011 28.3 4.0 39 10-48 30-71 (186)
203 3of5_A Dethiobiotin synthetase 37.8 35 0.0012 29.8 4.7 36 10-45 3-40 (228)
204 2vrn_A Protease I, DR1199; cys 37.7 62 0.0021 26.9 6.2 40 8-48 7-46 (190)
205 2yrx_A Phosphoribosylglycinami 37.4 1.2E+02 0.004 29.4 8.9 35 8-47 19-54 (451)
206 1p9o_A Phosphopantothenoylcyst 37.3 18 0.0006 33.5 2.7 38 11-48 37-89 (313)
207 3hwr_A 2-dehydropantoate 2-red 37.3 17 0.00058 33.7 2.7 47 10-66 19-65 (318)
208 1qgu_B Protein (nitrogenase mo 37.2 1.8E+02 0.0063 28.8 10.4 34 10-48 360-393 (519)
209 2fb6_A Conserved hypothetical 37.1 32 0.0011 26.5 3.8 38 11-48 8-49 (117)
210 4hb9_A Similarities with proba 37.1 20 0.00068 34.0 3.3 30 11-45 2-31 (412)
211 3kcn_A Adenylate cyclase homol 36.9 81 0.0028 24.6 6.6 52 373-426 75-128 (151)
212 3fwz_A Inner membrane protein 36.7 22 0.00077 28.1 3.0 34 10-48 7-40 (140)
213 3ksu_A 3-oxoacyl-acyl carrier 36.5 33 0.0011 30.6 4.4 33 11-46 11-43 (262)
214 4eg0_A D-alanine--D-alanine li 36.3 29 0.00099 31.9 4.1 38 10-47 13-54 (317)
215 3qsg_A NAD-binding phosphogluc 36.3 17 0.00059 33.5 2.5 33 9-46 23-56 (312)
216 4fn4_A Short chain dehydrogena 35.7 63 0.0022 28.7 6.1 35 10-47 6-40 (254)
217 3c24_A Putative oxidoreductase 35.3 27 0.00093 31.6 3.7 33 10-47 11-44 (286)
218 2raf_A Putative dinucleotide-b 35.3 49 0.0017 28.3 5.2 49 9-69 18-66 (209)
219 1wcv_1 SOJ, segregation protei 35.2 31 0.0011 30.5 4.1 37 11-47 7-44 (257)
220 3dfi_A Pseudoaglycone deacetyl 35.0 38 0.0013 30.5 4.5 42 4-46 1-43 (270)
221 3l6d_A Putative oxidoreductase 34.9 21 0.00072 32.8 2.9 34 9-47 8-41 (306)
222 2qyt_A 2-dehydropantoate 2-red 34.8 16 0.00054 33.6 2.0 32 10-46 8-45 (317)
223 2h31_A Multifunctional protein 34.7 1.8E+02 0.0063 27.9 9.4 137 278-437 264-411 (425)
224 3lyu_A Putative hydrogenase; t 34.6 42 0.0015 26.7 4.4 35 10-47 18-52 (142)
225 3ak4_A NADH-dependent quinucli 34.5 50 0.0017 29.2 5.3 33 12-47 13-45 (263)
226 3t4x_A Oxidoreductase, short c 34.0 52 0.0018 29.2 5.3 35 10-47 9-43 (267)
227 4e12_A Diketoreductase; oxidor 34.0 30 0.001 31.3 3.7 33 10-47 4-36 (283)
228 1e2b_A Enzyme IIB-cellobiose; 33.7 74 0.0025 23.9 5.3 37 10-46 3-39 (106)
229 3lzw_A Ferredoxin--NADP reduct 33.7 12 0.00042 34.4 1.0 33 10-47 7-39 (332)
230 3i4f_A 3-oxoacyl-[acyl-carrier 33.6 49 0.0017 29.2 5.1 34 10-46 6-39 (264)
231 1ehi_A LMDDL2, D-alanine:D-lac 33.5 35 0.0012 32.3 4.3 37 10-46 3-44 (377)
232 3uf0_A Short-chain dehydrogena 33.5 45 0.0015 29.9 4.8 34 11-47 31-64 (273)
233 3ug7_A Arsenical pump-driving 33.3 33 0.0011 32.2 4.0 39 10-48 25-64 (349)
234 3afo_A NADH kinase POS5; alpha 33.2 40 0.0014 32.2 4.5 59 345-420 107-170 (388)
235 3h2s_A Putative NADH-flavin re 33.1 34 0.0012 29.2 3.9 34 11-48 1-34 (224)
236 3end_A Light-independent proto 33.0 45 0.0016 30.3 4.9 38 10-47 41-78 (307)
237 3ew7_A LMO0794 protein; Q8Y8U8 33.0 35 0.0012 29.0 3.9 34 11-48 1-34 (221)
238 1cp2_A CP2, nitrogenase iron p 33.0 40 0.0014 29.9 4.4 37 11-47 2-38 (269)
239 3grc_A Sensor protein, kinase; 32.9 1E+02 0.0036 23.4 6.5 48 373-421 79-127 (140)
240 1ydg_A Trp repressor binding p 32.9 54 0.0019 27.8 5.1 38 9-46 5-43 (211)
241 2ae2_A Protein (tropinone redu 32.7 49 0.0017 29.2 4.9 34 11-47 9-42 (260)
242 2lnd_A De novo designed protei 32.4 81 0.0028 22.1 4.7 47 372-419 49-99 (112)
243 3l4b_C TRKA K+ channel protien 32.4 15 0.00052 31.7 1.4 33 11-48 1-33 (218)
244 3v2g_A 3-oxoacyl-[acyl-carrier 32.3 41 0.0014 30.1 4.3 34 10-46 30-63 (271)
245 2a5l_A Trp repressor binding p 32.1 55 0.0019 27.4 5.0 37 11-47 6-43 (200)
246 2gkg_A Response regulator homo 32.1 43 0.0015 25.0 4.0 46 373-421 79-125 (127)
247 3k31_A Enoyl-(acyl-carrier-pro 32.1 64 0.0022 29.2 5.7 35 11-47 30-65 (296)
248 1z7e_A Protein aRNA; rossmann 32.0 39 0.0013 34.9 4.6 95 11-138 1-107 (660)
249 1qo0_D AMIR; binding protein, 32.0 2.1E+02 0.0071 23.4 11.3 101 293-421 20-125 (196)
250 2xcl_A Phosphoribosylamine--gl 31.8 1.6E+02 0.0055 28.0 8.8 32 11-47 1-33 (422)
251 3goc_A Endonuclease V; alpha-b 31.7 52 0.0018 28.9 4.6 36 97-134 99-141 (237)
252 2ehd_A Oxidoreductase, oxidore 31.6 56 0.0019 28.1 5.0 34 11-47 5-38 (234)
253 1pno_A NAD(P) transhydrogenase 31.3 43 0.0015 27.5 3.6 39 10-48 23-64 (180)
254 4huj_A Uncharacterized protein 31.3 20 0.00069 31.0 2.0 32 10-46 23-54 (220)
255 3dff_A Teicoplanin pseudoaglyc 31.2 42 0.0014 30.2 4.2 36 10-46 7-43 (273)
256 3o38_A Short chain dehydrogena 31.1 74 0.0025 28.0 5.9 35 11-47 22-56 (266)
257 1gsa_A Glutathione synthetase; 31.0 38 0.0013 30.8 4.0 37 11-47 2-41 (316)
258 3gl9_A Response regulator; bet 30.9 68 0.0023 24.0 4.9 41 96-137 36-85 (122)
259 1d4o_A NADP(H) transhydrogenas 30.8 44 0.0015 27.6 3.6 39 10-48 22-63 (184)
260 3uxy_A Short-chain dehydrogena 30.5 45 0.0015 29.7 4.3 33 11-46 28-60 (266)
261 4da9_A Short-chain dehydrogena 30.5 80 0.0027 28.3 6.0 34 10-46 28-61 (280)
262 3l77_A Short-chain alcohol deh 30.4 47 0.0016 28.7 4.3 34 11-47 2-35 (235)
263 3iqw_A Tail-anchored protein t 30.4 43 0.0015 31.2 4.2 40 9-48 14-54 (334)
264 3gi1_A LBP, laminin-binding pr 30.4 93 0.0032 28.1 6.4 79 38-135 178-258 (286)
265 2ptg_A Enoyl-acyl carrier redu 30.3 67 0.0023 29.4 5.6 33 11-45 9-42 (319)
266 1gee_A Glucose 1-dehydrogenase 30.3 35 0.0012 30.1 3.5 32 12-46 8-39 (261)
267 3i6i_A Putative leucoanthocyan 30.3 49 0.0017 30.7 4.7 37 8-48 8-44 (346)
268 2b69_A UDP-glucuronate decarbo 30.2 40 0.0014 31.2 4.0 35 8-46 25-59 (343)
269 4fu0_A D-alanine--D-alanine li 30.0 26 0.00089 33.0 2.7 38 8-45 1-42 (357)
270 1ks9_A KPA reductase;, 2-dehyd 29.9 36 0.0012 30.6 3.6 32 11-47 1-32 (291)
271 3e8x_A Putative NAD-dependent 29.9 51 0.0018 28.4 4.5 36 9-48 20-55 (236)
272 3u5t_A 3-oxoacyl-[acyl-carrier 29.6 45 0.0015 29.8 4.1 33 11-46 27-59 (267)
273 3q9l_A Septum site-determining 29.5 55 0.0019 28.7 4.7 37 12-48 4-41 (260)
274 1f0y_A HCDH, L-3-hydroxyacyl-C 29.5 31 0.0011 31.5 3.1 33 10-47 15-47 (302)
275 3i1j_A Oxidoreductase, short c 29.5 90 0.0031 27.0 6.1 34 11-47 14-47 (247)
276 3cky_A 2-hydroxymethyl glutara 29.4 52 0.0018 29.8 4.6 33 10-47 4-36 (301)
277 1e4e_A Vancomycin/teicoplanin 29.2 30 0.001 32.2 3.0 37 10-46 3-43 (343)
278 2afh_E Nitrogenase iron protei 29.1 54 0.0018 29.5 4.6 37 11-47 3-39 (289)
279 1hdo_A Biliverdin IX beta redu 29.1 81 0.0028 26.1 5.6 34 11-48 4-37 (206)
280 3k9g_A PF-32 protein; ssgcid, 29.0 43 0.0015 29.7 3.9 37 10-47 26-64 (267)
281 1qsg_A Enoyl-[acyl-carrier-pro 29.0 58 0.002 28.8 4.7 34 12-47 10-44 (265)
282 1z82_A Glycerol-3-phosphate de 28.9 37 0.0013 31.5 3.5 33 10-47 14-46 (335)
283 3doj_A AT3G25530, dehydrogenas 28.8 39 0.0014 31.0 3.7 34 9-47 20-53 (310)
284 3rkr_A Short chain oxidoreduct 28.8 60 0.002 28.7 4.8 34 11-47 29-62 (262)
285 3to5_A CHEY homolog; alpha(5)b 28.8 57 0.002 25.6 4.1 32 107-138 57-97 (134)
286 2o1e_A YCDH; alpha-beta protei 28.8 1.7E+02 0.0059 26.7 8.1 79 38-135 189-269 (312)
287 3obb_A Probable 3-hydroxyisobu 28.8 54 0.0018 30.0 4.5 31 11-46 4-34 (300)
288 1e7w_A Pteridine reductase; di 28.8 53 0.0018 29.6 4.5 32 11-45 9-40 (291)
289 3guy_A Short-chain dehydrogena 28.7 40 0.0014 29.1 3.5 34 11-47 1-34 (230)
290 3qrx_B Melittin; calcium-bindi 28.6 19 0.00065 18.9 0.8 17 363-379 1-17 (26)
291 2yvq_A Carbamoyl-phosphate syn 28.6 2E+02 0.0068 22.7 7.4 35 278-318 24-58 (143)
292 2fsv_C NAD(P) transhydrogenase 28.5 49 0.0017 27.8 3.6 39 10-48 46-87 (203)
293 3o26_A Salutaridine reductase; 28.3 52 0.0018 29.7 4.4 35 10-47 11-45 (311)
294 3enk_A UDP-glucose 4-epimerase 28.3 53 0.0018 30.2 4.5 33 10-46 5-37 (341)
295 2zki_A 199AA long hypothetical 28.2 54 0.0018 27.5 4.2 36 10-46 4-40 (199)
296 1fjh_A 3alpha-hydroxysteroid d 28.2 60 0.002 28.4 4.7 33 11-46 1-33 (257)
297 2l2q_A PTS system, cellobiose- 28.2 63 0.0021 24.3 4.1 35 10-44 4-38 (109)
298 2xdo_A TETX2 protein; tetracyc 28.1 40 0.0014 32.0 3.7 35 8-47 24-58 (398)
299 2i87_A D-alanine-D-alanine lig 28.0 27 0.00091 33.0 2.4 37 10-46 3-43 (364)
300 1djl_A Transhydrogenase DIII; 28.0 51 0.0017 27.8 3.6 39 10-48 45-86 (207)
301 3mjf_A Phosphoribosylamine--gl 28.0 1.4E+02 0.0047 28.8 7.6 25 10-39 3-27 (431)
302 3sbx_A Putative uncharacterize 27.8 94 0.0032 26.2 5.5 39 9-47 12-53 (189)
303 1iow_A DD-ligase, DDLB, D-ALA\ 27.7 76 0.0026 28.6 5.4 38 10-47 2-43 (306)
304 3h7a_A Short chain dehydrogena 27.7 58 0.002 28.6 4.5 35 10-47 6-40 (252)
305 2an1_A Putative kinase; struct 27.6 39 0.0013 30.7 3.4 32 349-382 60-95 (292)
306 1evy_A Glycerol-3-phosphate de 27.6 21 0.00072 33.7 1.6 32 11-47 16-47 (366)
307 3ucx_A Short chain dehydrogena 27.5 73 0.0025 28.2 5.1 34 11-47 11-44 (264)
308 3afn_B Carbonyl reductase; alp 27.4 40 0.0014 29.5 3.4 33 12-47 8-40 (258)
309 1qyd_A Pinoresinol-lariciresin 27.4 63 0.0022 29.2 4.8 33 11-47 5-37 (313)
310 3v8b_A Putative dehydrogenase, 27.4 55 0.0019 29.5 4.3 35 10-47 27-61 (283)
311 4g65_A TRK system potassium up 27.4 15 0.0005 36.2 0.4 34 10-48 3-36 (461)
312 2e6c_A 5'-nucleotidase SURE; S 27.3 1.4E+02 0.0049 26.2 6.8 58 11-70 1-58 (244)
313 4egf_A L-xylulose reductase; s 27.2 65 0.0022 28.6 4.7 34 11-47 20-53 (266)
314 3dqp_A Oxidoreductase YLBE; al 27.1 40 0.0014 28.7 3.2 34 11-48 1-34 (219)
315 3ea0_A ATPase, para family; al 27.1 49 0.0017 28.7 3.9 37 12-48 6-44 (245)
316 1vdc_A NTR, NADPH dependent th 27.1 20 0.0007 32.9 1.3 32 10-46 8-39 (333)
317 1u11_A PURE (N5-carboxyaminoim 27.1 2.7E+02 0.0093 23.1 10.6 140 279-440 21-174 (182)
318 3k96_A Glycerol-3-phosphate de 27.1 42 0.0014 31.6 3.5 34 9-47 28-61 (356)
319 1u0t_A Inorganic polyphosphate 27.0 31 0.001 31.8 2.5 54 350-420 73-130 (307)
320 3s55_A Putative short-chain de 26.9 63 0.0021 28.9 4.6 33 11-46 10-42 (281)
321 1cyd_A Carbonyl reductase; sho 26.9 94 0.0032 26.7 5.7 34 10-47 7-40 (244)
322 3gem_A Short chain dehydrogena 26.9 47 0.0016 29.4 3.7 34 11-47 27-60 (260)
323 1y56_B Sarcosine oxidase; dehy 26.9 34 0.0012 32.1 2.9 33 10-47 5-37 (382)
324 3slg_A PBGP3 protein; structur 26.7 41 0.0014 31.5 3.4 35 9-47 23-58 (372)
325 4ezb_A Uncharacterized conserv 26.6 33 0.0011 31.7 2.7 33 10-47 24-57 (317)
326 2qk4_A Trifunctional purine bi 26.6 2.1E+02 0.0072 27.5 8.7 33 10-47 24-57 (452)
327 3awd_A GOX2181, putative polyo 26.5 69 0.0024 28.0 4.8 33 12-47 14-46 (260)
328 2wsb_A Galactitol dehydrogenas 26.5 84 0.0029 27.3 5.4 33 12-47 12-44 (254)
329 2h78_A Hibadh, 3-hydroxyisobut 26.4 49 0.0017 30.1 3.8 33 10-47 3-35 (302)
330 2q1s_A Putative nucleotide sug 26.2 52 0.0018 30.9 4.1 34 10-47 32-66 (377)
331 1zmt_A Haloalcohol dehalogenas 26.0 61 0.0021 28.5 4.3 33 11-46 1-33 (254)
332 3v2h_A D-beta-hydroxybutyrate 26.0 70 0.0024 28.7 4.8 33 11-46 25-57 (281)
333 4e21_A 6-phosphogluconate dehy 25.9 43 0.0015 31.6 3.4 34 9-47 21-54 (358)
334 3f6r_A Flavodoxin; FMN binding 25.9 72 0.0025 25.1 4.4 37 11-47 2-39 (148)
335 2h7i_A Enoyl-[acyl-carrier-pro 25.6 48 0.0017 29.4 3.6 35 11-47 7-42 (269)
336 3ioy_A Short-chain dehydrogena 25.6 82 0.0028 28.9 5.3 34 11-47 8-41 (319)
337 4eso_A Putative oxidoreductase 25.6 73 0.0025 28.0 4.7 34 11-47 8-41 (255)
338 4e5s_A MCCFLIKE protein (BA_56 25.5 83 0.0028 29.2 5.2 73 293-382 62-136 (331)
339 3tox_A Short chain dehydrogena 25.5 67 0.0023 28.8 4.5 35 10-47 7-41 (280)
340 4ehi_A Bifunctional purine bio 25.4 59 0.002 32.1 4.2 49 10-69 24-72 (534)
341 2w36_A Endonuclease V; hypoxan 25.4 91 0.0031 27.1 5.0 28 107-134 103-137 (225)
342 2yw2_A Phosphoribosylamine--gl 25.4 2.8E+02 0.0095 26.3 9.3 32 11-47 1-33 (424)
343 1nn5_A Similar to deoxythymidy 25.2 90 0.0031 26.2 5.2 38 8-45 7-44 (215)
344 3bfv_A CAPA1, CAPB2, membrane 25.2 1.1E+02 0.0038 27.3 5.9 38 10-47 81-120 (271)
345 2woo_A ATPase GET3; tail-ancho 25.1 71 0.0024 29.5 4.7 39 10-48 18-57 (329)
346 2pju_A Propionate catabolism o 25.1 53 0.0018 28.7 3.5 40 93-136 141-180 (225)
347 3ius_A Uncharacterized conserv 25.0 52 0.0018 29.3 3.7 33 11-48 6-38 (286)
348 2ph1_A Nucleotide-binding prot 25.0 82 0.0028 27.8 5.0 37 11-47 19-56 (262)
349 1eiw_A Hypothetical protein MT 24.9 70 0.0024 24.4 3.8 64 350-419 36-108 (111)
350 3cwq_A Para family chromosome 24.9 74 0.0025 27.0 4.5 36 11-47 1-37 (209)
351 1u7z_A Coenzyme A biosynthesis 24.9 71 0.0024 27.8 4.3 23 26-48 36-58 (226)
352 3f67_A Putative dienelactone h 24.9 83 0.0028 26.6 4.9 36 11-46 32-67 (241)
353 2gdz_A NAD+-dependent 15-hydro 24.8 93 0.0032 27.4 5.3 33 12-47 8-40 (267)
354 2pd6_A Estradiol 17-beta-dehyd 24.8 75 0.0026 27.8 4.7 33 12-47 8-40 (264)
355 3to5_A CHEY homolog; alpha(5)b 24.8 92 0.0032 24.4 4.7 108 291-420 18-132 (134)
356 3q2o_A Phosphoribosylaminoimid 24.7 85 0.0029 29.7 5.3 42 1-47 4-46 (389)
357 2pn1_A Carbamoylphosphate synt 24.7 67 0.0023 29.4 4.5 33 9-47 3-37 (331)
358 3s2u_A UDP-N-acetylglucosamine 24.5 1.9E+02 0.0065 26.9 7.7 27 352-380 92-121 (365)
359 1c0p_A D-amino acid oxidase; a 24.5 54 0.0018 30.5 3.8 33 10-47 6-38 (363)
360 3nva_A CTP synthase; rossman f 24.4 76 0.0026 31.6 4.8 40 10-49 2-44 (535)
361 1byi_A Dethiobiotin synthase; 24.4 71 0.0024 27.2 4.3 34 12-45 3-37 (224)
362 3ga2_A Endonuclease V; alpha-b 24.4 66 0.0022 28.4 3.9 36 97-134 101-143 (246)
363 3rd5_A Mypaa.01249.C; ssgcid, 24.3 75 0.0026 28.5 4.7 34 11-47 16-49 (291)
364 1ny5_A Transcriptional regulat 24.2 2.5E+02 0.0086 26.4 8.6 86 373-462 71-159 (387)
365 1xhl_A Short-chain dehydrogena 24.2 92 0.0032 28.1 5.3 34 11-47 26-59 (297)
366 2pd4_A Enoyl-[acyl-carrier-pro 24.2 86 0.0029 27.9 5.0 35 11-47 6-41 (275)
367 2qh9_A UPF0215 protein AF_1433 24.0 76 0.0026 26.6 4.2 40 95-134 52-97 (184)
368 1xkq_A Short-chain reductase f 24.0 95 0.0033 27.6 5.3 34 11-47 6-39 (280)
369 3pxx_A Carveol dehydrogenase; 23.9 81 0.0028 28.1 4.8 33 11-46 10-42 (287)
370 2z1m_A GDP-D-mannose dehydrata 23.9 64 0.0022 29.5 4.2 34 10-47 3-36 (345)
371 1q57_A DNA primase/helicase; d 23.7 1E+02 0.0036 30.3 5.9 39 11-49 243-282 (503)
372 2rjn_A Response regulator rece 23.6 38 0.0013 26.7 2.2 51 373-425 78-130 (154)
373 4edh_A DTMP kinase, thymidylat 23.6 96 0.0033 26.6 5.0 40 7-46 3-42 (213)
374 3c1o_A Eugenol synthase; pheny 23.6 74 0.0025 28.9 4.5 33 11-47 5-37 (321)
375 3g79_A NDP-N-acetyl-D-galactos 23.4 78 0.0027 31.2 4.8 35 9-48 17-53 (478)
376 3uce_A Dehydrogenase; rossmann 23.4 55 0.0019 28.1 3.4 34 10-46 5-38 (223)
377 4e6p_A Probable sorbitol dehyd 23.4 1.2E+02 0.0041 26.6 5.8 34 11-47 8-41 (259)
378 2dkn_A 3-alpha-hydroxysteroid 23.2 81 0.0028 27.3 4.6 33 12-47 2-34 (255)
379 1o97_C Electron transferring f 23.1 91 0.0031 27.9 4.8 39 94-136 103-147 (264)
380 3grc_A Sensor protein, kinase; 23.1 1.5E+02 0.0051 22.4 5.8 36 7-46 3-38 (140)
381 2etv_A Iron(III) ABC transport 23.0 64 0.0022 30.0 4.0 29 107-135 96-125 (346)
382 1u8x_X Maltose-6'-phosphate gl 23.0 48 0.0016 32.6 3.1 36 9-48 27-67 (472)
383 4iiu_A 3-oxoacyl-[acyl-carrier 22.9 81 0.0028 27.8 4.5 33 11-46 26-58 (267)
384 3lf2_A Short chain oxidoreduct 22.8 93 0.0032 27.4 4.9 35 10-47 7-41 (265)
385 1yb4_A Tartronic semialdehyde 22.7 58 0.002 29.3 3.5 30 11-45 4-33 (295)
386 1xjc_A MOBB protein homolog; s 22.7 1.3E+02 0.0043 24.8 5.3 38 11-48 5-42 (169)
387 3lyh_A Cobalamin (vitamin B12) 22.6 2.5E+02 0.0087 21.3 7.2 38 278-316 5-42 (126)
388 3sju_A Keto reductase; short-c 22.6 70 0.0024 28.6 4.1 34 11-47 24-57 (279)
389 3grp_A 3-oxoacyl-(acyl carrier 22.6 99 0.0034 27.4 5.0 34 11-47 27-60 (266)
390 2q62_A ARSH; alpha/beta, flavo 22.6 1E+02 0.0036 27.1 5.1 38 9-46 33-73 (247)
391 2ag5_A DHRS6, dehydrogenase/re 22.6 1.2E+02 0.004 26.3 5.5 34 11-47 6-39 (246)
392 1xfi_A Unknown protein; struct 22.6 68 0.0023 30.4 4.0 39 10-48 212-251 (367)
393 4hs4_A Chromate reductase; tri 22.6 38 0.0013 28.9 2.0 35 7-42 3-40 (199)
394 3pgx_A Carveol dehydrogenase; 22.5 84 0.0029 28.0 4.6 33 11-46 15-47 (280)
395 1zi8_A Carboxymethylenebutenol 22.5 97 0.0033 26.0 4.9 37 11-47 28-64 (236)
396 2x4g_A Nucleoside-diphosphate- 22.4 71 0.0024 29.2 4.2 34 10-47 13-46 (342)
397 1mxh_A Pteridine reductase 2; 22.4 79 0.0027 28.0 4.4 32 12-46 12-43 (276)
398 2x5n_A SPRPN10, 26S proteasome 22.4 1E+02 0.0036 25.8 4.9 34 13-46 110-143 (192)
399 4iin_A 3-ketoacyl-acyl carrier 22.3 96 0.0033 27.4 4.9 33 11-46 29-61 (271)
400 3hn7_A UDP-N-acetylmuramate-L- 22.3 70 0.0024 31.9 4.3 33 10-46 19-51 (524)
401 3s40_A Diacylglycerol kinase; 22.2 2.3E+02 0.0077 25.7 7.5 85 278-384 9-99 (304)
402 3r3s_A Oxidoreductase; structu 22.1 1.1E+02 0.0039 27.4 5.4 34 11-47 49-82 (294)
403 1vhq_A Enhancing lycopene bios 22.1 1.5E+02 0.0051 25.6 6.0 38 10-48 6-48 (232)
404 1vi6_A 30S ribosomal protein S 22.0 60 0.002 27.9 3.1 31 107-137 115-147 (208)
405 3bul_A Methionine synthase; tr 22.0 90 0.0031 31.5 4.9 40 9-48 97-136 (579)
406 4fs3_A Enoyl-[acyl-carrier-pro 22.0 92 0.0032 27.4 4.7 37 10-47 5-41 (256)
407 3tzq_B Short-chain type dehydr 21.9 94 0.0032 27.6 4.7 35 10-47 10-44 (271)
408 3oid_A Enoyl-[acyl-carrier-pro 21.9 1.1E+02 0.0038 26.9 5.2 32 11-45 4-35 (258)
409 3i12_A D-alanine-D-alanine lig 21.8 50 0.0017 31.1 3.0 39 9-47 2-44 (364)
410 1txg_A Glycerol-3-phosphate de 21.8 46 0.0016 30.6 2.7 31 11-46 1-31 (335)
411 3pid_A UDP-glucose 6-dehydroge 21.8 56 0.0019 31.7 3.3 34 8-47 34-67 (432)
412 3rih_A Short chain dehydrogena 21.8 98 0.0034 27.9 4.9 34 11-47 41-74 (293)
413 3foj_A Uncharacterized protein 21.7 1.8E+02 0.0061 20.9 5.6 34 10-47 56-89 (100)
414 4dgk_A Phytoene dehydrogenase; 21.6 39 0.0013 33.2 2.3 31 11-46 2-32 (501)
415 3hdg_A Uncharacterized protein 21.6 1.5E+02 0.0053 22.2 5.5 49 373-423 78-127 (137)
416 3alj_A 2-methyl-3-hydroxypyrid 21.6 58 0.002 30.6 3.4 35 8-47 9-43 (379)
417 4h1h_A LMO1638 protein; MCCF-l 21.6 1.1E+02 0.0038 28.3 5.2 72 293-381 62-135 (327)
418 4dmm_A 3-oxoacyl-[acyl-carrier 21.6 1E+02 0.0034 27.4 4.9 34 10-46 27-60 (269)
419 3bq9_A Predicted rossmann fold 21.6 1.9E+02 0.0064 28.1 6.8 99 277-380 142-284 (460)
420 3h1g_A Chemotaxis protein CHEY 21.6 1.2E+02 0.0041 22.7 4.8 46 374-421 81-127 (129)
421 1jay_A Coenzyme F420H2:NADP+ o 21.5 59 0.002 27.5 3.2 33 11-47 1-33 (212)
422 4ibo_A Gluconate dehydrogenase 21.5 86 0.003 27.9 4.4 34 11-47 26-59 (271)
423 3l18_A Intracellular protease 21.5 1.7E+02 0.0059 23.5 6.0 38 10-48 2-39 (168)
424 1j9j_A Stationary phase surviV 21.4 1.6E+02 0.0056 25.9 6.0 115 11-136 1-128 (247)
425 1gz6_A Estradiol 17 beta-dehyd 21.4 1.1E+02 0.0037 28.1 5.1 32 11-45 9-40 (319)
426 1spx_A Short-chain reductase f 21.3 1.2E+02 0.004 26.9 5.3 34 11-47 6-39 (278)
427 3r6d_A NAD-dependent epimerase 21.3 98 0.0034 26.2 4.6 35 11-48 5-40 (221)
428 3pdu_A 3-hydroxyisobutyrate de 21.2 62 0.0021 29.1 3.4 32 11-47 2-33 (287)
429 3ic5_A Putative saccharopine d 21.2 58 0.002 24.1 2.8 33 10-47 5-38 (118)
430 2o2s_A Enoyl-acyl carrier redu 21.2 1.2E+02 0.0039 27.7 5.3 33 11-45 9-42 (315)
431 2wyu_A Enoyl-[acyl carrier pro 21.2 72 0.0025 28.1 3.8 35 11-47 8-43 (261)
432 2wwf_A Thymidilate kinase, put 21.2 1.4E+02 0.0047 24.9 5.5 36 9-44 9-44 (212)
433 2hy5_B Intracellular sulfur ox 21.2 82 0.0028 24.9 3.7 37 12-48 7-46 (136)
434 3pef_A 6-phosphogluconate dehy 21.1 63 0.0022 29.1 3.4 32 11-47 2-33 (287)
435 3pk0_A Short-chain dehydrogena 21.1 1.1E+02 0.0038 26.9 5.0 34 11-47 10-43 (262)
436 3d3j_A Enhancer of mRNA-decapp 21.1 76 0.0026 29.1 3.9 34 11-47 133-168 (306)
437 3ego_A Probable 2-dehydropanto 21.0 52 0.0018 30.1 2.8 46 10-66 2-48 (307)
438 1oi4_A Hypothetical protein YH 21.0 1.7E+02 0.006 24.3 6.0 38 10-48 23-60 (193)
439 4g6h_A Rotenone-insensitive NA 20.9 42 0.0014 33.3 2.3 35 9-48 41-75 (502)
440 2ywx_A Phosphoribosylaminoimid 20.9 3.4E+02 0.012 22.0 11.3 130 282-438 2-144 (157)
441 3edm_A Short chain dehydrogena 20.9 1E+02 0.0035 27.1 4.7 33 11-46 8-40 (259)
442 2d1y_A Hypothetical protein TT 20.7 1.2E+02 0.0041 26.5 5.2 33 12-47 7-39 (256)
443 1rkx_A CDP-glucose-4,6-dehydra 20.7 47 0.0016 30.8 2.5 34 10-47 9-42 (357)
444 4fbl_A LIPS lipolytic enzyme; 20.6 58 0.002 28.9 3.0 33 14-46 54-86 (281)
445 2bi7_A UDP-galactopyranose mut 20.6 1.1E+02 0.0039 28.8 5.3 33 10-47 3-35 (384)
446 3nyw_A Putative oxidoreductase 20.6 76 0.0026 27.8 3.8 35 10-47 6-40 (250)
447 1qyc_A Phenylcoumaran benzylic 20.6 82 0.0028 28.3 4.1 33 11-47 5-37 (308)
448 3pg5_A Uncharacterized protein 20.5 73 0.0025 29.9 3.8 36 12-47 3-39 (361)
449 3cio_A ETK, tyrosine-protein k 20.5 1.3E+02 0.0045 27.3 5.5 37 11-47 105-142 (299)
450 3svt_A Short-chain type dehydr 20.5 1E+02 0.0035 27.5 4.7 35 10-47 10-44 (281)
451 3hly_A Flavodoxin-like domain; 20.4 1.3E+02 0.0044 24.2 4.9 36 11-46 1-37 (161)
452 2ew8_A (S)-1-phenylethanol deh 20.4 1.5E+02 0.0051 25.7 5.7 32 12-46 8-39 (249)
453 3dtt_A NADP oxidoreductase; st 20.3 53 0.0018 28.8 2.7 35 8-47 17-51 (245)
454 1mv8_A GMD, GDP-mannose 6-dehy 20.3 87 0.003 30.3 4.4 32 11-47 1-32 (436)
455 3trh_A Phosphoribosylaminoimid 20.3 99 0.0034 25.5 3.9 33 7-40 3-35 (169)
456 3icc_A Putative 3-oxoacyl-(acy 20.3 1.3E+02 0.0044 26.1 5.3 33 11-46 7-39 (255)
457 4ao6_A Esterase; hydrolase, th 20.2 88 0.003 27.4 4.2 38 10-47 55-94 (259)
458 3d3k_A Enhancer of mRNA-decapp 20.2 81 0.0028 28.1 3.8 34 11-47 86-121 (259)
459 3ruf_A WBGU; rossmann fold, UD 20.2 79 0.0027 29.1 4.0 34 10-47 25-58 (351)
460 3vtf_A UDP-glucose 6-dehydroge 20.2 2.5E+02 0.0086 27.2 7.6 32 10-46 21-52 (444)
461 2oxj_A Hybrid alpha/beta pepti 20.2 1.4E+02 0.0047 17.2 3.6 29 409-437 4-33 (34)
462 3t6k_A Response regulator rece 20.2 1.3E+02 0.0046 22.8 4.8 48 374-423 78-126 (136)
463 3bch_A 40S ribosomal protein S 20.1 67 0.0023 28.5 3.1 31 107-137 151-183 (253)
464 1f9y_A HPPK, protein (6-hydrox 20.1 1E+02 0.0036 25.1 4.1 28 281-309 2-29 (158)
465 3gt7_A Sensor protein; structu 20.1 1.7E+02 0.0057 22.8 5.5 39 4-46 1-39 (154)
466 1zk4_A R-specific alcohol dehy 20.1 1.2E+02 0.004 26.3 4.9 33 12-47 7-39 (251)
467 3gaf_A 7-alpha-hydroxysteroid 20.1 1E+02 0.0035 27.0 4.6 34 11-47 12-45 (256)
468 2xxa_A Signal recognition part 20.0 1.1E+02 0.0038 29.5 5.1 41 10-50 100-141 (433)
469 3ged_A Short-chain dehydrogena 20.0 96 0.0033 27.4 4.3 34 11-47 2-35 (247)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=6.4e-65 Score=509.73 Aligned_cols=435 Identities=23% Similarity=0.356 Sum_probs=346.3
Q ss_pred ccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCC--CeEEEEcCCccccccccCC-CCCCCeEEEeCCCCCCCC--CC
Q 011687 3 NMMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRG--FEPIVITPEFIHNQITSSM-DPRSEISCMSIPDGLEKN--EP 77 (479)
Q Consensus 3 ~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~i~~~~-~~~~g~~~~~i~~~l~~~--~~ 77 (479)
|.|+..++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+.. ....+++|..+|++++.+ ..
T Consensus 6 ~~M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~ 85 (454)
T 3hbf_A 6 NEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSS 85 (454)
T ss_dssp ------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCC
T ss_pred ccccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCcccc
Confidence 445555678999999999999999999999999999 9999999986555553311 113579999999988764 22
Q ss_pred CCHHHHHHHHHHhchHHHHHHHHHh-hc-cCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhc-
Q 011687 78 KDFFAIEKVIENIMPIHLERLINKI-NE-DGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKS- 154 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~l-~~-~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~- 154 (479)
.+....+..+...+...+++.++++ .+ ..++|+||+|.+++|+..+|+++|||++.+++++++.+..+.+.+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 2233344444444555566666654 22 23799999999999999999999999999999999998887776654332
Q ss_pred CCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcc
Q 011687 155 GYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHS 234 (479)
Q Consensus 155 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~ 234 (479)
+...... ......+|+++.+..+++++.+.. .......+.+.+.......++.+++|++++||++..+ ++++
T Consensus 166 ~~~~~~~-----~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~--~~~~ 237 (454)
T 3hbf_A 166 GSKEVHD-----VKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIEN--ELNS 237 (454)
T ss_dssp CHHHHTT-----SSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH--HHHT
T ss_pred CCCcccc-----ccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHH--HHHh
Confidence 1000000 112345888888888888877653 2223344555555566678999999999999998776 6666
Q ss_pred cccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEE
Q 011687 235 KGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIW 314 (479)
Q Consensus 235 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw 314 (479)
. .+++++|||++.... ......+.++.+||+.++++++||||||| ....+.+++.+++.+++..+++|||
T Consensus 238 ----~-~~~v~~vGPl~~~~~----~~~~~~~~~~~~wLd~~~~~~vVyvsfGS-~~~~~~~~~~el~~~l~~~~~~flw 307 (454)
T 3hbf_A 238 ----K-FKLLLNVGPFNLTTP----QRKVSDEHGCLEWLDQHENSSVVYISFGS-VVTPPPHELTALAESLEECGFPFIW 307 (454)
T ss_dssp ----T-SSCEEECCCHHHHSC----CSCCCCTTCHHHHHHTSCTTCEEEEECCS-SCCCCHHHHHHHHHHHHHHCCCEEE
T ss_pred ----c-CCCEEEECCcccccc----cccccchHHHHHHHhcCCCCceEEEecCC-CCcCCHHHHHHHHHHHHhCCCeEEE
Confidence 3 479999999987532 11123355789999988889999999999 8888899999999999999999999
Q ss_pred EEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHH
Q 011687 315 VLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIV 394 (479)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~ 394 (479)
+++......+|+++.++.+ +|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||++++
T Consensus 308 ~~~~~~~~~lp~~~~~~~~--~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~ 385 (454)
T 3hbf_A 308 SFRGDPKEKLPKGFLERTK--TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE 385 (454)
T ss_dssp ECCSCHHHHSCTTHHHHTT--TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred EeCCcchhcCCHhHHhhcC--CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHH
Confidence 9987654457888888888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceeeeCC--CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHH
Q 011687 395 KMWKIGIRVNG--FGKRDIEDGLKKLKEDS---EMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLS 457 (479)
Q Consensus 395 ~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~---~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (479)
+.+|+|+.++. ++.++|.++|+++|+++ +||+||+++++++++++++|||++..++++++.+.
T Consensus 386 ~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 386 SVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 83499999975 99999999999999887 89999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9e-62 Score=496.51 Aligned_cols=439 Identities=26% Similarity=0.525 Sum_probs=335.1
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCC-----CCCeEEEeCCCCCCCC-----CC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDP-----RSEISCMSIPDGLEKN-----EP 77 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~-----~~g~~~~~i~~~l~~~-----~~ 77 (479)
++++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+.... ..+++|+++|++++.. ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 3468999999999999999999999999999999999998765555431100 1389999999776641 12
Q ss_pred CCHHHHHHHHHHhchHHHHHHHHHhhc---cCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhc
Q 011687 78 KDFFAIEKVIENIMPIHLERLINKINE---DGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKS 154 (479)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (479)
.+...++..+...+...++++++.+.. ..++|+||+|.++.|+..+|+++|||++.++++++.......+++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 344555555556688888888888753 24899999999999999999999999999999988777665555655445
Q ss_pred CCCCCCCCC---Cc-cccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhh
Q 011687 155 GYISDTGSP---QH-LESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQ 230 (479)
Q Consensus 155 ~~~p~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~ 230 (479)
++.|..... .. ..+..+.+|+.+.+...+++.++..........+.+.........++.+++|++++||++..+
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~-- 243 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN-- 243 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH--
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH--
Confidence 555543210 00 012233455554444445554433221122233333334455578899999999999998766
Q ss_pred hhcccccccCCCceeEecccccc-ccc-------cCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHH
Q 011687 231 YHHSKGATLCRPKVLLVGPLSKH-ATI-------AKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLA 302 (479)
Q Consensus 231 ~~~~~~~~~~~~~v~~vGpl~~~-~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~ 302 (479)
++++ .+ +++++|||++.. +.. ......++.+.++.+||+.++++++||||||| ....+.+++..++
T Consensus 244 ~~~~----~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS-~~~~~~~~~~~~~ 317 (482)
T 2pq6_A 244 ALSS----TI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGS-TTVMTPEQLLEFA 317 (482)
T ss_dssp HHHT----TC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCS-SSCCCHHHHHHHH
T ss_pred HHHH----hC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCC-cccCCHHHHHHHH
Confidence 6665 44 899999999864 210 00012234455788999987788999999999 8778888899999
Q ss_pred HHHHhCCCCeEEEEcCCcC----CCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCccee
Q 011687 303 LTLEALGLPFIWVLGFAWR----EGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLL 378 (479)
Q Consensus 303 ~al~~~~~~~iw~~~~~~~----~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l 378 (479)
.+|+..+++|+|+++.... ..+|+++.++.+ +|+++++|+||.++|+|+++++||||||+||++||+++|||+|
T Consensus 318 ~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i 395 (482)
T 2pq6_A 318 WGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIA--DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPML 395 (482)
T ss_dssp HHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHT--TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred HHHHhcCCcEEEEEcCCccccccccCcHhHHHhcC--CCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEE
Confidence 9999999999999985421 126788877888 9999999999999999999999999999999999999999999
Q ss_pred cccCccchhhHHHHHH-HHhcceeeeCC-CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHcccccCCCchhHHHHHHH
Q 011687 379 CYPVAGDQFINCAYIV-KMWKIGIRVNG-FGKRDIEDGLKKLKEDS---EMKHRLMNLYMRTMGDDGARARVMNNLTGFV 453 (479)
Q Consensus 379 ~~P~~~DQ~~nA~rv~-~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~---~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~ 453 (479)
++|++.||+.||++++ + +|+|+.+++ ++.++|.++|+++|+|+ +||+||++++++++++..+|||+.+++++++
T Consensus 396 ~~P~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 474 (482)
T 2pq6_A 396 CWPFFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474 (482)
T ss_dssp ECCCSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ecCcccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 9999999999999996 7 999999976 99999999999999888 6999999999999999999999999999999
Q ss_pred HHHH
Q 011687 454 DDLS 457 (479)
Q Consensus 454 ~~~~ 457 (479)
+.+.
T Consensus 475 ~~~~ 478 (482)
T 2pq6_A 475 KDVL 478 (482)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9763
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9.8e-59 Score=472.55 Aligned_cols=435 Identities=25% Similarity=0.395 Sum_probs=320.8
Q ss_pred CCCCCCEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCc--cccccccCCCC-CCCeEEEeCCCCCCCC--CCCC
Q 011687 6 CTKKKNKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPEF--IHNQITSSMDP-RSEISCMSIPDGLEKN--EPKD 79 (479)
Q Consensus 6 ~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~--~~~~i~~~~~~-~~g~~~~~i~~~l~~~--~~~~ 79 (479)
...+++||+++|+|++||++|+++||++|++| ||+|||++++. +.+.+++.... ..+++|++++.+...+ ...+
T Consensus 2 ~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 2 EESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp ----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchh
Confidence 34456899999999999999999999999998 99999999876 33333310011 2589999998653221 1123
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhccCCc-eEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCC
Q 011687 80 FFAIEKVIENIMPIHLERLINKINEDGRV-ACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYIS 158 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~-D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p 158 (479)
....+......+...++++++++....++ |+||+|.+..++..+|+++|||++.++++++.....+.++|........+
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 33333334445667778888775323378 99999998888999999999999999999887776665555433221111
Q ss_pred CCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccc
Q 011687 159 DTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGAT 238 (479)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 238 (479)
... ......+|+++.....+++..+... ....+..+.......+....+++|++.+++..... ++.+.. .
T Consensus 162 ~~~-----~~~~~~~Pg~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~--~l~~~~-~ 231 (480)
T 2vch_A 162 FRE-----LTEPLMLPGCVPVAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIK--ALQEPG-L 231 (480)
T ss_dssp GGG-----CSSCBCCTTCCCBCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHH--HHHSCC-T
T ss_pred ccc-----cCCcccCCCCCCCChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHH--HHHhcc-c
Confidence 000 0001124444444444454443221 11233334444444566778999999999986655 444200 0
Q ss_pred cCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 011687 239 LCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGF 318 (479)
Q Consensus 239 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~ 318 (479)
.+ +++++|||++..... ....+.+.++.+||+.++++++||||||| ....+.+++..++.+++..+++|||+++.
T Consensus 232 ~~-~~v~~vGpl~~~~~~---~~~~~~~~~~~~wLd~~~~~~vvyvs~GS-~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 232 DK-PPVYPVGPLVNIGKQ---EAKQTEESECLKWLDNQPLGSVLYVSFGS-GGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp TC-CCEEECCCCCCCSCS---CC-----CHHHHHHHTSCTTCEEEEECTT-TCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CC-CcEEEEecccccccc---ccCccchhHHHHHhcCCCCCceEEEeccc-ccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 13 689999999865320 00123455788999987788999999999 77788999999999999999999999985
Q ss_pred CcC----------------CCCChhhHhhhcCCCCceEEe-eeehHHhhcccCccceEeccchhHHHHHHHhCcceeccc
Q 011687 319 AWR----------------EGLPDGYLDRVSNSRQGKVVP-WAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYP 381 (479)
Q Consensus 319 ~~~----------------~~l~~~~~~~~~~~~nv~~~~-~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 381 (479)
... ..+|+++.+++. ++.+++. |+||.+||+|+++++||||||+||++||+++|||+|++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P 384 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWP 384 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred ccccccccccccccccchhhhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecc
Confidence 321 136777777766 6767885 999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHH-HHHhcceeeeC-----CCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHcccccCCCchhHHHHHH
Q 011687 382 VAGDQFINCAYI-VKMWKIGIRVN-----GFGKRDIEDGLKKLKE---DSEMKHRLMNLYMRTMGDDGARARVMNNLTGF 452 (479)
Q Consensus 382 ~~~DQ~~nA~rv-~~~~Gvg~~~~-----~~~~~~i~~~i~~vl~---~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~ 452 (479)
++.||+.||+++ ++ +|+|+.++ .++.++|+++|+++|+ +++||+||++++++++++..+||++...++++
T Consensus 385 ~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~ 463 (480)
T 2vch_A 385 LYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLV 463 (480)
T ss_dssp CSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHH
T ss_pred ccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999997 68 99999885 3899999999999998 78999999999999999888899999999999
Q ss_pred HHHHHh
Q 011687 453 VDDLSK 458 (479)
Q Consensus 453 ~~~~~~ 458 (479)
++.+..
T Consensus 464 v~~~~~ 469 (480)
T 2vch_A 464 ALKWKA 469 (480)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998876
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.7e-58 Score=467.81 Aligned_cols=430 Identities=27% Similarity=0.408 Sum_probs=318.8
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCe--EEEEcCCccccccccCCC--CCCCeEEEeCCCCCCCCC--CCCHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFE--PIVITPEFIHNQITSSMD--PRSEISCMSIPDGLEKNE--PKDFFA 82 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~--V~~~~~~~~~~~i~~~~~--~~~g~~~~~i~~~l~~~~--~~~~~~ 82 (479)
+++||+++|+|++||++|++.||+.|++|||+ ||+++++.....+..... ...+++++.++++++... ......
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~ 85 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQE 85 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTH
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHH
Confidence 46899999999999999999999999999766 577887643333322111 125799999998776531 112233
Q ss_pred HHHHHHHhchHHHHHHHHHhh-c-cCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhc-CCCCC
Q 011687 83 IEKVIENIMPIHLERLINKIN-E-DGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKS-GYISD 159 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~-~-~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~p~ 159 (479)
.+..+...+...++++++++. + ..++|+||+|.++.++..+|+++|||+|.++++++..+....+.+..... +..+.
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI 165 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCccc
Confidence 334444434455556665542 1 24899999999989999999999999999999987766554443332211 11111
Q ss_pred CCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHH-HHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccc
Q 011687 160 TGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWS-RTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGAT 238 (479)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 238 (479)
... . ......+|+++.++..+++..+.... ....+..+. +.......++.+++|++++++++... ++++
T Consensus 166 ~~~--~-~~~~~~~pg~~~~~~~~lp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~--~~~~---- 235 (456)
T 2c1x_A 166 QGR--E-DELLNFIPGMSKVRFRDLQEGIVFGN-LNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN--DLKS---- 235 (456)
T ss_dssp TTC--T-TCBCTTSTTCTTCBGGGSCTTTSSSC-TTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH--HHHH----
T ss_pred ccc--c-ccccccCCCCCcccHHhCchhhcCCC-cccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH--HHHh----
Confidence 000 0 11223456655555555554332111 111222222 22234467889999999999998665 5565
Q ss_pred cCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 011687 239 LCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGF 318 (479)
Q Consensus 239 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~ 318 (479)
. .+++++|||++.... ...++.+.++.+|++.++++++||||||| ....+.+++..++.+++..+++|+|+++.
T Consensus 236 ~-~~~~~~vGpl~~~~~----~~~~~~~~~~~~wl~~~~~~~vv~vs~GS-~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 309 (456)
T 2c1x_A 236 K-LKTYLNIGPFNLITP----PPVVPNTTGCLQWLKERKPTSVVYISFGT-VTTPPPAEVVALSEALEASRVPFIWSLRD 309 (456)
T ss_dssp H-SSCEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCS-SCCCCHHHHHHHHHHHHHHTCCEEEECCG
T ss_pred c-CCCEEEecCcccCcc----cccccchhhHHHHHhcCCCcceEEEecCc-cccCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 3 379999999986532 01123345688999987788999999999 87778899999999999999999999986
Q ss_pred CcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHh-
Q 011687 319 AWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMW- 397 (479)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~- 397 (479)
.....+|+++.++.+ +|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|++.||+.||+++++ .
T Consensus 310 ~~~~~l~~~~~~~~~--~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~-~~ 386 (456)
T 2c1x_A 310 KARVHLPEGFLEKTR--GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED-VL 386 (456)
T ss_dssp GGGGGSCTTHHHHHT--TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-TS
T ss_pred cchhhCCHHHHhhcC--CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHH-Hh
Confidence 544457778777777 899999999999999999999999999999999999999999999999999999999999 6
Q ss_pred cceeeeCC--CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHH
Q 011687 398 KIGIRVNG--FGKRDIEDGLKKLKEDS---EMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLS 457 (479)
Q Consensus 398 Gvg~~~~~--~~~~~i~~~i~~vl~~~---~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (479)
|+|+.++. ++.++|.++|+++|+++ +||+||++++++++++..+|||+...++++++.+.
T Consensus 387 g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 387 EIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp CCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred CeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 99999964 89999999999999887 89999999999999999999999999999999873
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=8.9e-57 Score=456.41 Aligned_cols=430 Identities=23% Similarity=0.409 Sum_probs=320.7
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccc-----cccccCCCCCCCeEEEeCCCC-CCCCC-CCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIH-----NQITSSMDPRSEISCMSIPDG-LEKNE-PKD 79 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~-----~~i~~~~~~~~g~~~~~i~~~-l~~~~-~~~ 79 (479)
+++||+++|+|++||++|++.||+.|++| ||+|||++++... +.+........+++|+.+|++ ++... ...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 46899999999999999999999999999 9999999987642 112110112258999999976 33210 111
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCC
Q 011687 80 FFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISD 159 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~ 159 (479)
....+......+...++++++++ ...++|+||+|.++.++..+|+++|||++.+++++++.+..+.++|..... .+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~~~ 164 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE--EVF 164 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--CCC
T ss_pred ccHHHHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--CCC
Confidence 11112233345666778888775 223899999999889999999999999999999988877666555543210 010
Q ss_pred CCCCCccccccccCCCC-CCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccc
Q 011687 160 TGSPQHLESTARFLPNQ-PMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGAT 238 (479)
Q Consensus 160 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 238 (479)
... .. ......+|++ +.+...+++..+... ...+..+.......+..+.+++|+++++++.... ++.+
T Consensus 165 ~~~-~~-~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~--~l~~---- 233 (463)
T 2acv_A 165 DDS-DR-DHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSID--ALYD---- 233 (463)
T ss_dssp CCS-SG-GGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHH--HHHH----
T ss_pred CCc-cc-cCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHH--HHHh----
Confidence 000 00 0002235555 444444444333221 1234444444455577888999999999987765 4443
Q ss_pred cC--CCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccc-cCCHHHHHHHHHHHHhCCCCeEEE
Q 011687 239 LC--RPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVS-PIGEEKVKTLALTLEALGLPFIWV 315 (479)
Q Consensus 239 ~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~-~~~~~~~~~l~~al~~~~~~~iw~ 315 (479)
.. .+++++|||++...........+..+.++.+||+.++++++||||||| .. ..+.+++..++.+++..+++|||+
T Consensus 234 ~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS-~~~~~~~~~~~~~~~~l~~~~~~~l~~ 312 (463)
T 2acv_A 234 HDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGS-MGVSFGPSQIREIALGLKHSGVRFLWS 312 (463)
T ss_dssp HCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCS-SCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEecc-ccccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 22 478999999986431000000013345789999987789999999999 77 788899999999999999999999
Q ss_pred EcCCcCCCCChhhHhhh--cCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHH
Q 011687 316 LGFAWREGLPDGYLDRV--SNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYI 393 (479)
Q Consensus 316 ~~~~~~~~l~~~~~~~~--~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv 393 (479)
++.+ ...+|+++.++. + +|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|++.||+.||+++
T Consensus 313 ~~~~-~~~l~~~~~~~~~~~--~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 313 NSAE-KKVFPEGFLEWMELE--GKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp CCCC-GGGSCTTHHHHHHHH--CSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred ECCC-cccCChhHHHhhccC--CCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 9863 123677776666 6 8999999999999999999999999999999999999999999999999999999995
Q ss_pred -HHHhcceeee-C-------CCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHH
Q 011687 394 -VKMWKIGIRV-N-------GFGKRDIEDGLKKLKE-DSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLS 457 (479)
Q Consensus 394 -~~~~Gvg~~~-~-------~~~~~~i~~~i~~vl~-~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~ 457 (479)
++ +|+|+.+ + .++.++|.++|+++|+ +++||+||++++++++++..+||+++.++++|++.+.
T Consensus 390 v~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 390 VKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 78 9999999 2 4799999999999997 5899999999999999998899999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.2e-44 Score=365.06 Aligned_cols=382 Identities=17% Similarity=0.194 Sum_probs=263.2
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCC------CCCHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNE------PKDFF 81 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~------~~~~~ 81 (479)
|++|||+|+++++.||++|+++||++|+++||+|++++++.+.+.+++ .|++|++++..++... ..+..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-----AGATPVVYDSILPKESNPEESWPEDQE 84 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCEEEECCCCSCCTTCTTCCCCSSHH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEecCccccccccchhhcchhHH
Confidence 456899999999999999999999999999999999999988777777 7899999987654321 22333
Q ss_pred HHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCC
Q 011687 82 AIEKVIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTG 161 (479)
Q Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~ 161 (479)
..+..+...+...+.++.+.++ +.+||+||+|.+.+++..+|+++|||++.+++.+....... ..+.....+.... .
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~-~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~~~~~-~ 161 (424)
T 2iya_A 85 SAMGLFLDEAVRVLPQLEDAYA-DDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDPTADR-G 161 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-ccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccccccc-c
Confidence 3333333333333333333333 23899999999888999999999999999987653111000 0000000000000 0
Q ss_pred CCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHH-------hhhcCCceEEEcCchhhhhhhhhhhhhcc
Q 011687 162 SPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTL-------ERSRNLKWLLVNSFPEEYMDDIKQQYHHS 234 (479)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~ 234 (479)
. ....+...... ................+..+.... ......+.+++++++.++++..
T Consensus 162 ~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~------- 226 (424)
T 2iya_A 162 E-------EAAAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGD------- 226 (424)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGG-------
T ss_pred c-------ccccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCcc-------
Confidence 0 00000000000 000000000000001111111111 0112567889999999886532
Q ss_pred cccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEE
Q 011687 235 KGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIW 314 (479)
Q Consensus 235 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw 314 (479)
.+++++++|||+..... +..+|++...++++|||++|| ......+.+..++++++..+.+++|
T Consensus 227 ----~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs-~~~~~~~~~~~~~~al~~~~~~~~~ 289 (424)
T 2iya_A 227 ----TVGDNYTFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGS-AFTDHLDFYRTCLSAVDGLDWHVVL 289 (424)
T ss_dssp ----GCCTTEEECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCS-SSCCCHHHHHHHHHHHTTCSSEEEE
T ss_pred ----CCCCCEEEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCC-CCcchHHHHHHHHHHHhcCCcEEEE
Confidence 46788999999764211 012577655678899999999 6666788899999999988889999
Q ss_pred EEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHH
Q 011687 315 VLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIV 394 (479)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~ 394 (479)
.++.+.. .+.+ +..+ +|+.+++|+||.++|+++++ ||||||+||+.||+++|||+|++|...||+.||++++
T Consensus 290 ~~g~~~~---~~~~-~~~~--~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 361 (424)
T 2iya_A 290 SVGRFVD---PADL-GEVP--PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV 361 (424)
T ss_dssp ECCTTSC---GGGG-CSCC--TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred EECCcCC---hHHh-ccCC--CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHH
Confidence 8875321 1111 1234 89999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 395 KMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 395 ~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
+ .|+|..++. ++.++|.++|+++|+|++++++++++++++++.
T Consensus 362 ~-~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 406 (424)
T 2iya_A 362 E-LGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEIREA 406 (424)
T ss_dssp H-TTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred H-CCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 9 999999864 899999999999999999999999999999874
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.7e-43 Score=355.69 Aligned_cols=385 Identities=14% Similarity=0.100 Sum_probs=261.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCC--C-CCCHHHHHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKN--E-PKDFFAIEKVI 87 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~--~-~~~~~~~~~~~ 87 (479)
|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+++ .|++++.++...... . ....... +
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~~~~~~~~~~~~~~~---~ 72 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-----VGVPHVPVGPSARAPIQRAKPLTAED---V 72 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEECCC-------CCSCCCHHH---H
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCHHHHhhcccccchHH---H
Confidence 799999999999999999999999999999999999887777777 789999998653211 1 1111111 1
Q ss_pred HHhchHHHHHHHHHhhc-cCCceEEEeCC-Cccc--HHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCCC
Q 011687 88 ENIMPIHLERLINKINE-DGRVACVVVDL-LASS--AIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGSP 163 (479)
Q Consensus 88 ~~~~~~~l~~~l~~l~~-~~~~D~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~ 163 (479)
...+.....++++++.. ..+||+||+|. +.++ +..+|+.+|||++.+++++..... .+.|....
T Consensus 73 ~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~~~~- 140 (415)
T 1iir_A 73 RRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPPPPL- 140 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCCccC-
Confidence 12222223334444421 34899999997 5688 899999999999998766432110 01110000
Q ss_pred CccccccccCCCCCCCCCCCCCcccCCC---ccchhHHHHHHHHHh---------hhcCCceEEEcCchhhhh-hhhhhh
Q 011687 164 QHLESTARFLPNQPMLSTEDLPWLIGTP---AARKSRFKFWSRTLE---------RSRNLKWLLVNSFPEEYM-DDIKQQ 230 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~~l~~s~~~l~~-~~~~~~ 230 (479)
. + .+++. .....+...+... .......+...+.+. ..... .+++++++.+++ +...
T Consensus 141 ---~--~-~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~-- 209 (415)
T 1iir_A 141 ---G--E-PSTQD--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQPTD-- 209 (415)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCCCS--
T ss_pred ---C--c-cccch--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCCccc--
Confidence 0 0 00000 0000000000000 000000111111110 00122 678999998876 4332
Q ss_pred hhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCC
Q 011687 231 YHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGL 310 (479)
Q Consensus 231 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~ 310 (479)
+ ++++|||+...+. +..+.++.+|++.+ +++|||++|| .. ...+....+++++++++.
T Consensus 210 ---------~--~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs-~~-~~~~~~~~~~~al~~~~~ 267 (415)
T 1iir_A 210 ---------L--DAVQTGAWILPDE-------RPLSPELAAFLDAG--PPPVYLGFGS-LG-APADAVRVAIDAIRAHGR 267 (415)
T ss_dssp ---------S--CCEECCCCCCCCC-------CCCCHHHHHHHHTS--SCCEEEECC-----CCHHHHHHHHHHHHHTTC
T ss_pred ---------C--CeEeeCCCccCcc-------cCCCHHHHHHHhhC--CCeEEEeCCC-CC-CcHHHHHHHHHHHHHCCC
Confidence 2 8999999876421 23456688999843 4799999999 65 678888999999999999
Q ss_pred CeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHH
Q 011687 311 PFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINC 390 (479)
Q Consensus 311 ~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA 390 (479)
+++|+++.+... . ...+ +|+++++|+||.++|+.+++ ||||||+||+.||+++|+|+|++|...||+.||
T Consensus 268 ~~v~~~g~~~~~-~-----~~~~--~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 268 RVILSRGWADLV-L-----PDDG--ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp CEEECTTCTTCC-C-----SSCG--GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eEEEEeCCCccc-c-----cCCC--CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 999998754321 1 1223 78999999999999988887 999999999999999999999999999999999
Q ss_pred HHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhcCCcceec
Q 011687 391 AYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTRNDHQFHL 468 (479)
Q Consensus 391 ~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (479)
+++++ .|+|+.++. ++.++|.++|+++ +|+++++++++++++++.. ...++++++++...++++..|+
T Consensus 338 ~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ 407 (415)
T 1iir_A 338 GRVAE-LGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGTIRTD--------GAAVAARLLLDAVSREKPTVSA 407 (415)
T ss_dssp HHHHH-HTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCSC--------HHHHHHHHHHHHHHTC------
T ss_pred HHHHH-CCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhhc--------ChHHHHHHHHHHHHhcccHHHH
Confidence 99999 899999864 8999999999999 9999999999999998763 5567778888888888877665
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.3e-43 Score=354.65 Aligned_cols=342 Identities=15% Similarity=0.125 Sum_probs=225.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCC-------------
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKN------------- 75 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~------------- 75 (479)
+.|||+|+++|+.||++|+++||++|++|||+|+|++++.+.... + .|+.+.++..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E-----AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T-----TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h-----cCCeeEecCCchhHhhhccccccccccc
Confidence 479999999999999999999999999999999999998775544 3 688888876544320
Q ss_pred ---CCCCHHHHHHHHHHhchH---HHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhh
Q 011687 76 ---EPKDFFAIEKVIENIMPI---HLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIP 149 (479)
Q Consensus 76 ---~~~~~~~~~~~~~~~~~~---~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p 149 (479)
...........+...... .+.++++.+ +||+||+|.+.+++..+|+.+|||++.+...+..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~- 169 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARSW----RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL- 169 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH-
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH-
Confidence 001111111222222222 233344444 899999999899999999999999998754432211110000
Q ss_pred hhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhh--cCCceEEEcCchhhhhhhh
Q 011687 150 EMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERS--RNLKWLLVNSFPEEYMDDI 227 (479)
Q Consensus 150 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~s~~~l~~~~~ 227 (479)
............... ......+....+......+
T Consensus 170 --------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
T 4amg_A 170 --------------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLP 205 (400)
T ss_dssp --------------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSC
T ss_pred --------------------------------------------HHHHHHHHHHHhCCCcccccchhhcccCchhhccCc
Confidence 000000111111000 1111222222222211111
Q ss_pred hhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCC--HHHHHHHHHHH
Q 011687 228 KQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIG--EEKVKTLALTL 305 (479)
Q Consensus 228 ~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~--~~~~~~l~~al 305 (479)
. . ...+....+.+..... ...+.+|++..+++++|||+||| ..... .+.+..++.++
T Consensus 206 ~--~-------~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~~~~l 264 (400)
T 4amg_A 206 E--D-------RRSPGAWPMRYVPYNG-----------GAVLPDWLPPAAGRRRIAVTLGS-IDALSGGIAKLAPLFSEV 264 (400)
T ss_dssp G--G-------GCCTTCEECCCCCCCC-----------CEECCTTCSCCTTCCEEEECCCS-CC--CCSSSTTHHHHHHG
T ss_pred c--c-------ccCCcccCcccccccc-----------cccCcccccccCCCcEEEEeCCc-ccccCccHHHHHHHHHHh
Confidence 0 0 0012222232222211 11233688878889999999999 65433 36788899999
Q ss_pred HhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccc
Q 011687 306 EALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGD 385 (479)
Q Consensus 306 ~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 385 (479)
++.+.+++|.+++....... ..+ +|+++.+|+||.++|+|+++ ||||||+||+.||+++|||+|++|++.|
T Consensus 265 ~~~~~~~v~~~~~~~~~~~~-----~~~--~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~d 335 (400)
T 4amg_A 265 ADVDAEFVLTLGGGDLALLG-----ELP--ANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSY 335 (400)
T ss_dssp GGSSSEEEEECCTTCCCCCC-----CCC--TTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---
T ss_pred hccCceEEEEecCccccccc-----cCC--CCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCccc
Confidence 99999999998765322211 223 89999999999999999988 9999999999999999999999999999
Q ss_pred hhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 386 QFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 386 Q~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
|+.||+++++ +|+|+.++. .+.++++|+++|+|++||++|+++++++++.
T Consensus 336 Q~~na~~v~~-~G~g~~l~~--~~~~~~al~~lL~d~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 336 QDTNRDVLTG-LGIGFDAEA--GSLGAEQCRRLLDDAGLREAALRVRQEMSEM 385 (400)
T ss_dssp CHHHHHHHHH-HTSEEECCT--TTCSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHH-CCCEEEcCC--CCchHHHHHHHHcCHHHHHHHHHHHHHHHcC
Confidence 9999999999 999999975 1223457888999999999999999999985
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.1e-42 Score=346.58 Aligned_cols=380 Identities=14% Similarity=0.082 Sum_probs=260.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCC--C--CCCHHHHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKN--E--PKDFFAIEKV 86 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~--~--~~~~~~~~~~ 86 (479)
|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++ .|+++++++...... . .......+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQHMMLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----HTCCEEECSCCGGGCCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCHHHHHhhccccchhHHHHH
Confidence 799999999999999999999999999999999999887777777 789999988653211 0 0111111111
Q ss_pred HHHhchHHHHHHHHHhh-ccCCceEEEeCC-Cccc--HHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCC
Q 011687 87 IENIMPIHLERLINKIN-EDGRVACVVVDL-LASS--AIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGS 162 (479)
Q Consensus 87 ~~~~~~~~l~~~l~~l~-~~~~~D~vi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 162 (479)
+ ....+.++++.+. ...+||+||+|. +.++ +..+|+.+|||++.+.+++..... .+.| ...
T Consensus 76 ~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p-~~~ 140 (416)
T 1rrv_A 76 L---AAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP-PAY 140 (416)
T ss_dssp H---HHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC-CCB
T ss_pred H---HHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC-CCC
Confidence 1 1122233344432 123899999997 4577 889999999999998765422100 0111 000
Q ss_pred CCccccccccCCCCCCCCCCCCCcccCCC-------ccchhHHHHHHHHHh---------hhcCCceEEEcCchhhhhhh
Q 011687 163 PQHLESTARFLPNQPMLSTEDLPWLIGTP-------AARKSRFKFWSRTLE---------RSRNLKWLLVNSFPEEYMDD 226 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~l~~s~~~l~~~~ 226 (479)
. ++ .......+..... .......+.+.+.+. ..... .+++++++.++++.
T Consensus 141 ----~-----~~----~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~ 206 (416)
T 1rrv_A 141 ----D-----EP----TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ 206 (416)
T ss_dssp ----C-----SC----CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC
T ss_pred ----C-----CC----CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC
Confidence 0 00 0000000000000 000001111111110 11223 68899999887654
Q ss_pred hhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCcccc-CCHHHHHHHHHHH
Q 011687 227 IKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSP-IGEEKVKTLALTL 305 (479)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~-~~~~~~~~l~~al 305 (479)
.. . ++++|||+..+.. ++.+.++.+|++.+ +++|||++|| ... ...+.+..+++++
T Consensus 207 ~~------------~-~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs-~~~~~~~~~~~~~~~al 263 (416)
T 1rrv_A 207 PD------------V-DAVQTGAWLLSDE-------RPLPPELEAFLAAG--SPPVHIGFGS-SSGRGIADAAKVAVEAI 263 (416)
T ss_dssp SS------------C-CCEECCCCCCCCC-------CCCCHHHHHHHHSS--SCCEEECCTT-CCSHHHHHHHHHHHHHH
T ss_pred CC------------C-CeeeECCCccCcc-------CCCCHHHHHHHhcC--CCeEEEecCC-CCccChHHHHHHHHHHH
Confidence 32 2 8999999876532 23456688999843 4799999999 543 4567888999999
Q ss_pred HhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccc
Q 011687 306 EALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGD 385 (479)
Q Consensus 306 ~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~D 385 (479)
++.+++++|+++..... . ...+ +|+.+++|+||.++|+++++ ||||||+||+.||+++|+|+|++|...|
T Consensus 264 ~~~~~~~v~~~g~~~~~-~-----~~~~--~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 333 (416)
T 1rrv_A 264 RAQGRRVILSRGWTELV-L-----PDDR--DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTD 333 (416)
T ss_dssp HHTTCCEEEECTTTTCC-C-----SCCC--TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBT
T ss_pred HHCCCeEEEEeCCcccc-c-----cCCC--CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCC
Confidence 99999999998864321 1 1234 79999999999999988888 9999999999999999999999999999
Q ss_pred hhhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHH-HhhhcC
Q 011687 386 QFINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDL-SKLTRN 462 (479)
Q Consensus 386 Q~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~ 462 (479)
|+.||+++++ .|+|..++. ++.++|.++|+++ +|++++++++++++++++. ... ++++++ +...++
T Consensus 334 Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 334 QPYFAGRVAA-LGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVAGMVLTD--------GAA-AAADLVLAAVGRE 402 (416)
T ss_dssp HHHHHHHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCCC--------HHH-HHHHHHHHHHHC-
T ss_pred cHHHHHHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhhc--------CcH-HHHHHHHHHHhcc
Confidence 9999999999 899998864 8999999999999 9999999999999888863 334 667777 777777
Q ss_pred Ccceec
Q 011687 463 DHQFHL 468 (479)
Q Consensus 463 ~~~~~~ 468 (479)
++..|+
T Consensus 403 ~~~~~~ 408 (416)
T 1rrv_A 403 KPAVPA 408 (416)
T ss_dssp ------
T ss_pred CCCCcc
Confidence 776665
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=4.1e-41 Score=336.81 Aligned_cols=351 Identities=12% Similarity=0.072 Sum_probs=244.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCC---CCCCCHHHHHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEK---NEPKDFFAIEKVI 87 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~---~~~~~~~~~~~~~ 87 (479)
|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++ .|+.+.+++..... ............+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 75 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-----VGVPMVPVGRAVRAGAREPGELPPGAAEVV 75 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSSGGGSCTTCCCTTCGGGH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHHHHhccccCCHHHHHHHH
Confidence 799999999999999999999999999999999999988888887 89999999854331 0000000111111
Q ss_pred HHhchHHHHHHHHHhhccCCceEEEeCCCcccH---HHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCCCC
Q 011687 88 ENIMPIHLERLINKINEDGRVACVVVDLLASSA---IGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGSPQ 164 (479)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 164 (479)
.......+.++.... .+||+||+|.....+ ..+|+.+|||++.+..++...... +....
T Consensus 76 ~~~~~~~~~~l~~~~---~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~--~~~~~------------- 137 (404)
T 3h4t_A 76 TEVVAEWFDKVPAAI---EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE--QSQAE------------- 137 (404)
T ss_dssp HHHHHHHHHHHHHHH---TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--SCHHH-------------
T ss_pred HHHHHHHHHHHHHHh---cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--hHHHH-------------
Confidence 121222222222221 279999998655433 789999999999886655321000 00000
Q ss_pred ccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhh--------cCCceEEEcCchhhhhhhhhhhhhcccc
Q 011687 165 HLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERS--------RNLKWLLVNSFPEEYMDDIKQQYHHSKG 236 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 236 (479)
....... .+ .......+.....+... ...+..+++..+.+.+..
T Consensus 138 --~~~~~~~-----------~~-----~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~---------- 189 (404)
T 3h4t_A 138 --RDMYNQG-----------AD-----RLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR---------- 189 (404)
T ss_dssp --HHHHHHH-----------HH-----HHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC----------
T ss_pred --HHHHHHH-----------HH-----HHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC----------
Confidence 0000000 00 00000011111111000 011234556666664332
Q ss_pred cccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEE
Q 011687 237 ATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVL 316 (479)
Q Consensus 237 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~ 316 (479)
.++++++++|++..+.. ...+.++.+|++. ++++|||++|| ... ..+.+..+++++++.+++++|++
T Consensus 190 --~~~~~~~~~G~~~~~~~-------~~~~~~l~~~l~~--~~~~Vlv~~Gs-~~~-~~~~~~~~~~al~~~~~~vv~~~ 256 (404)
T 3h4t_A 190 --PTDLGTVQTGAWILPDQ-------RPLSAELEGFLRA--GSPPVYVGFGS-GPA-PAEAARVAIEAVRAQGRRVVLSS 256 (404)
T ss_dssp --TTCCSCCBCCCCCCCCC-------CCCCHHHHHHHHT--SSCCEEECCTT-SCC-CTTHHHHHHHHHHHTTCCEEEEC
T ss_pred --CCCCCeEEeCccccCCC-------CCCCHHHHHHHhc--CCCeEEEECCC-CCC-cHHHHHHHHHHHHhCCCEEEEEe
Confidence 24678999998765432 2345567889883 46799999999 655 77889999999999999999998
Q ss_pred cCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHH
Q 011687 317 GFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKM 396 (479)
Q Consensus 317 ~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~ 396 (479)
+........ .+ +|+++++|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++
T Consensus 257 g~~~~~~~~------~~--~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~- 325 (404)
T 3h4t_A 257 GWAGLGRID------EG--DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD- 325 (404)
T ss_dssp TTTTCCCSS------CC--TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-
T ss_pred CCccccccc------CC--CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-
Confidence 854322111 13 89999999999999999888 99999999999999999999999999999999999999
Q ss_pred hcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcc
Q 011687 397 WKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMG 437 (479)
Q Consensus 397 ~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~ 437 (479)
.|+|..++. ++.+.|.++|+++++ ++|+++++++++.+.+
T Consensus 326 ~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 326 LGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTIRT 367 (404)
T ss_dssp HTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC
T ss_pred CCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh
Confidence 899999874 899999999999998 9999999999998876
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.9e-39 Score=323.88 Aligned_cols=362 Identities=14% Similarity=0.135 Sum_probs=253.8
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCC------CCCHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNE------PKDFFA 82 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~------~~~~~~ 82 (479)
++|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++ .|+.+..++..++... ......
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-----AGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----cCCEEEeccccccccccchhhccccHHH
Confidence 46899999999999999999999999999999999999888888887 8999999986554321 001111
Q ss_pred HHHH-HHHhchHHHHHHHHHhhccCCceEEEeC-CCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCC
Q 011687 83 IEKV-IENIMPIHLERLINKINEDGRVACVVVD-LLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDT 160 (479)
Q Consensus 83 ~~~~-~~~~~~~~l~~~l~~l~~~~~~D~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~ 160 (479)
.+.. +.......+.++.+.++ +.+||+||+| ...+++..+|+.+|||++.+.+.......... .+..... ..
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l~-~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~-~~--- 167 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEALD-GDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTL-AG--- 167 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-SSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHH-HT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-ccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccc-cc---
Confidence 1122 22222222333333332 2399999999 77788999999999999998643211000000 0000000 00
Q ss_pred CCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHh-------hhcCC-ceEEEcCchhhhhhhhhhhhh
Q 011687 161 GSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLE-------RSRNL-KWLLVNSFPEEYMDDIKQQYH 232 (479)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~l~~s~~~l~~~~~~~~~~ 232 (479)
...| .. .......+..+...+. ..... +..+....+.++++..
T Consensus 168 ----------~~~p-----------~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----- 218 (415)
T 3rsc_A 168 ----------TIDP-----------LD---LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGD----- 218 (415)
T ss_dssp ----------CCCG-----------GG---CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGG-----
T ss_pred ----------cCCh-----------hh---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcc-----
Confidence 0000 00 0000111111111111 01112 5666666666654332
Q ss_pred cccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCe
Q 011687 233 HSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPF 312 (479)
Q Consensus 233 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~ 312 (479)
.++.++.++||+..... +..+|....+++++|||++|| ......+.+..+++++++.+.++
T Consensus 219 ------~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs-~~~~~~~~~~~~~~al~~~~~~~ 279 (415)
T 3rsc_A 219 ------TFDDRFVFVGPCFDDRR------------FLGEWTRPADDLPVVLVSLGT-TFNDRPGFFRDCARAFDGQPWHV 279 (415)
T ss_dssp ------GCCTTEEECCCCCCCCG------------GGCCCCCCSSCCCEEEEECTT-TSCCCHHHHHHHHHHHTTSSCEE
T ss_pred ------cCCCceEEeCCCCCCcc------------cCcCccccCCCCCEEEEECCC-CCCChHHHHHHHHHHHhcCCcEE
Confidence 35678999999765321 112455445678899999999 77667788999999999999899
Q ss_pred EEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHH
Q 011687 313 IWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAY 392 (479)
Q Consensus 313 iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~r 392 (479)
+|.++.+.. ....+..+ +|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||++
T Consensus 280 v~~~g~~~~----~~~l~~~~--~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 280 VMTLGGQVD----PAALGDLP--PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARR 351 (415)
T ss_dssp EEECTTTSC----GGGGCCCC--TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHH
T ss_pred EEEeCCCCC----hHHhcCCC--CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHH
Confidence 988875421 11112234 89999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 393 IVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 393 v~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
+++ .|+|..+.. +++++|.++|+++|+|++++++++++++++.+.
T Consensus 352 l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 398 (415)
T 3rsc_A 352 VDQ-LGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRRA 398 (415)
T ss_dssp HHH-HTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHS
T ss_pred HHH-cCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 999 899998865 799999999999999999999999999999873
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.8e-38 Score=317.41 Aligned_cols=373 Identities=16% Similarity=0.145 Sum_probs=257.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCC------CCCCHHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKN------EPKDFFAI 83 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~------~~~~~~~~ 83 (479)
+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++ .|+.+..++..++.. ........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFDTFHVPEVVKQEDAETQ 78 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-----cCCEEEecccccccccccccccccchHHH
Confidence 4699999999999999999999999999999999999888788887 899999998543321 12233343
Q ss_pred HHH-HHHhchHHHHHHHHHhhccCCceEEEeC-CCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCC
Q 011687 84 EKV-IENIMPIHLERLINKINEDGRVACVVVD-LLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTG 161 (479)
Q Consensus 84 ~~~-~~~~~~~~l~~~l~~l~~~~~~D~vi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~ 161 (479)
+.. +.......+.++.+.+++ .+||+||+| ...+++..+|+.+|||++.+.+.......... .+....... . .
T Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~-~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~--~ 153 (402)
T 3ia7_A 79 LHLVYVRENVAILRAAEEALGD-NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-Q--R 153 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-C--C
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-c--c
Confidence 433 333333333333333332 399999999 77788999999999999998644321100000 000000000 0 0
Q ss_pred CCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHh-------hhcCC-ceEEEcCchhhhhhhhhhhhhc
Q 011687 162 SPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLE-------RSRNL-KWLLVNSFPEEYMDDIKQQYHH 233 (479)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~l~~s~~~l~~~~~~~~~~~ 233 (479)
.| .. ................ ..... +..+....+.++.+..
T Consensus 154 -----------~~-----------~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------ 202 (402)
T 3ia7_A 154 -----------HP-----------AD---VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAE------ 202 (402)
T ss_dssp -----------CG-----------GG---SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGG------
T ss_pred -----------Ch-----------hh---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccc------
Confidence 00 00 0000001111111110 01112 5566666566654332
Q ss_pred ccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeE
Q 011687 234 SKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFI 313 (479)
Q Consensus 234 ~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~i 313 (479)
.++.++.++||+..... ....|+...+++++|||++|| ......+.+..++++++..+.+++
T Consensus 203 -----~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~G~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 203 -----TFDERFAFVGPTLTGRD------------GQPGWQPPRPDAPVLLVSLGN-QFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp -----GCCTTEEECCCCCCC----------------CCCCCSSTTCCEEEEECCS-CSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred -----cCCCCeEEeCCCCCCcc------------cCCCCcccCCCCCEEEEECCC-CCcchHHHHHHHHHHHhcCCcEEE
Confidence 35678999998765321 012355445678899999999 776777889999999999898888
Q ss_pred EEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccC-ccchhhHHHH
Q 011687 314 WVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPV-AGDQFINCAY 392 (479)
Q Consensus 314 w~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~nA~r 392 (479)
|.++.+.. ....++.+ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|. ..||+.||++
T Consensus 265 ~~~g~~~~----~~~~~~~~--~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~ 336 (402)
T 3ia7_A 265 MAIGGFLD----PAVLGPLP--PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAER 336 (402)
T ss_dssp EECCTTSC----GGGGCSCC--TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHH
T ss_pred EEeCCcCC----hhhhCCCC--CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHH
Confidence 88875421 11112234 89999999999999999998 9999999999999999999999999 9999999999
Q ss_pred HHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHH
Q 011687 393 IVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVD 454 (479)
Q Consensus 393 v~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~ 454 (479)
+++ .|+|..+.. ++++.|.++++++|+|++++++++++++++.+. ++..+.++.+.+
T Consensus 337 ~~~-~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 395 (402)
T 3ia7_A 337 VIE-LGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSS----GGPARAADEVEA 395 (402)
T ss_dssp HHH-TTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CHHHHHHHHHHH
T ss_pred HHH-cCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhC----ChHHHHHHHHHH
Confidence 999 899998865 799999999999999999999999999999873 444444444433
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.7e-38 Score=315.97 Aligned_cols=377 Identities=17% Similarity=0.203 Sum_probs=255.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCC------CCCHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNE------PKDFFA 82 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~------~~~~~~ 82 (479)
++|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.+ .|++++.++...+... ..+...
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-----TGPRPVLYHSTLPGPDADPEAWGSTLLD 80 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TSCEEEECCCCSCCTTSCGGGGCSSHHH
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCcCccccccccccchhhHH
Confidence 34899999999999999999999999999999999999877666666 7899999886543211 123333
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCC
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGS 162 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 162 (479)
.+..+...+...+..+.+.+++ .+||+||+|.+.+++..+|+.+|||++.+++.................
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~-~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~--------- 150 (430)
T 2iyf_A 81 NVEPFLNDAIQALPQLADAYAD-DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW--------- 150 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh---------
Confidence 3333333233333333333332 389999999877788999999999999987553210000000000000
Q ss_pred CCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHH-------hhhcCCceEEEcCchhhhhhhhhhhhhccc
Q 011687 163 PQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTL-------ERSRNLKWLLVNSFPEEYMDDIKQQYHHSK 235 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~ 235 (479)
.. ....+.. .+ .......+.... ......+.+++++.+.++.+..
T Consensus 151 ----~~-~~~~~~~--------~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------- 202 (430)
T 2iyf_A 151 ----RE-PRQTERG--------RA-------YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHAD-------- 202 (430)
T ss_dssp ----HH-HHHSHHH--------HH-------HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGG--------
T ss_pred ----hh-hccchHH--------HH-------HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcc--------
Confidence 00 0000000 00 000011111110 0112457889999888875431
Q ss_pred ccccCCCc-eeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC-CCCeE
Q 011687 236 GATLCRPK-VLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL-GLPFI 313 (479)
Q Consensus 236 ~~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~-~~~~i 313 (479)
.++++ ++++||...... . ..+|....+++++||+++|| ......+.+..+++++++. +.+++
T Consensus 203 ---~~~~~~v~~vG~~~~~~~-----~-------~~~~~~~~~~~~~v~v~~Gs-~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (430)
T 2iyf_A 203 ---RVDEDVYTFVGACQGDRA-----E-------EGGWQRPAGAEKVVLVSLGS-AFTKQPAFYRECVRAFGNLPGWHLV 266 (430)
T ss_dssp ---GSCTTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTT-TCC-CHHHHHHHHHHHTTCTTEEEE
T ss_pred ---cCCCccEEEeCCcCCCCC-----C-------CCCCccccCCCCeEEEEcCC-CCCCcHHHHHHHHHHHhcCCCeEEE
Confidence 35667 999998654211 0 11355434567899999999 6666678889999999886 78888
Q ss_pred EEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHH
Q 011687 314 WVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYI 393 (479)
Q Consensus 314 w~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv 393 (479)
|.++.+... +.+ ++.+ +|+.+.+|+||.++|+++++ ||+|||+||+.||+++|+|+|++|...||..||+++
T Consensus 267 ~~~G~~~~~---~~l-~~~~--~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~ 338 (430)
T 2iyf_A 267 LQIGRKVTP---AEL-GELP--DNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338 (430)
T ss_dssp EECC---CG---GGG-CSCC--TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred EEeCCCCCh---HHh-ccCC--CCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH
Confidence 888754211 111 2234 79999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 394 VKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 394 ~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
++ .|+|..++. ++.++|+++|+++++|+++++++.++++++.+. + ..+.+++.++...+
T Consensus 339 ~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 339 QG-LGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQE----G----GTRRAADLIEAELP 399 (430)
T ss_dssp HH-TTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----C----HHHHHHHHHHTTSC
T ss_pred HH-cCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----C----cHHHHHHHHHHHhh
Confidence 99 899999864 799999999999999999999999999988764 2 23445555555444
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.5e-38 Score=316.29 Aligned_cols=354 Identities=15% Similarity=0.113 Sum_probs=248.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCC-C----------CCC-C
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLE-K----------NEP-K 78 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~-~----------~~~-~ 78 (479)
|||++++.++.||++|+++|+++|+++||+|++++++.+.+.++. .|+.++.++.... . +.. .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccCc
Confidence 789999999999999999999999999999999999876666666 7889988875431 0 000 1
Q ss_pred --CHHHHH-HH-HHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhc
Q 011687 79 --DFFAIE-KV-IENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKS 154 (479)
Q Consensus 79 --~~~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (479)
.....+ .. +...+...+.++.+.+++. +||+||+|.+.+++..+|+.+|||++.+...+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------------- 140 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRAW-RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------------- 140 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------------
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------------
Confidence 111111 11 1111222233333222222 8999999987788889999999999987422100
Q ss_pred CCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhh--cCCceEEEcCchhhhhhhhhhhhh
Q 011687 155 GYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERS--RNLKWLLVNSFPEEYMDDIKQQYH 232 (479)
Q Consensus 155 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~s~~~l~~~~~~~~~~ 232 (479)
... .. .......+.+...+... ...+.+++++.+.++.+..
T Consensus 141 ------------------~~~--------~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~----- 183 (384)
T 2p6p_A 141 ------------------ADG--------IH------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPANA----- 183 (384)
T ss_dssp ------------------CTT--------TH------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTS-----
T ss_pred ------------------cch--------hh------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCC-----
Confidence 000 00 00011111222221110 1156788888887764321
Q ss_pred cccccccCC-CceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccC-----CHHHHHHHHHHHH
Q 011687 233 HSKGATLCR-PKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPI-----GEEKVKTLALTLE 306 (479)
Q Consensus 233 ~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~-----~~~~~~~l~~al~ 306 (479)
++ .++.+++. .. +.++.+|++..+++++|||++|| .... +.+.+..++++++
T Consensus 184 -------~~~~~~~~~~~---~~-----------~~~~~~~l~~~~~~~~v~v~~Gs-~~~~~~~~~~~~~~~~~~~al~ 241 (384)
T 2p6p_A 184 -------APARMMRHVAT---SR-----------QCPLEPWMYTRDTRQRVLVTSGS-RVAKESYDRNFDFLRGLAKDLV 241 (384)
T ss_dssp -------CCCEECCCCCC---CC-----------CCBCCHHHHCCCSSCEEEEECSS-SSSCCSSCCCCTTHHHHHHHHH
T ss_pred -------CCCCceEecCC---CC-----------CCCCCchhhcCCCCCEEEEECCC-CCccccccccHHHHHHHHHHHh
Confidence 12 23334421 10 11244688754567899999999 6554 4578889999999
Q ss_pred hCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccch
Q 011687 307 ALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQ 386 (479)
Q Consensus 307 ~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 386 (479)
+.+++++|++++.. .+.+ +..+ +|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||
T Consensus 242 ~~~~~~~~~~g~~~----~~~l-~~~~--~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq 311 (384)
T 2p6p_A 242 RWDVELIVAAPDTV----AEAL-RAEV--PQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVL 311 (384)
T ss_dssp TTTCEEEEECCHHH----HHHH-HHHC--TTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHH
T ss_pred cCCcEEEEEeCCCC----HHhh-CCCC--CceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccc
Confidence 99999999887421 1111 2345 89999 99999999999888 99999999999999999999999999999
Q ss_pred hhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhcC
Q 011687 387 FINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTRN 462 (479)
Q Consensus 387 ~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 462 (479)
+.||+++++ .|+|..++. ++.++|.++|+++|+|++++++++++++++++. . ..++++++++...+|
T Consensus 312 ~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 312 EAPARRVAD-YGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----P----LPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----C----CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----C----CHHHHHHHHHHHhhh
Confidence 999999999 899998864 799999999999999999999999999999984 2 356666677666554
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2e-38 Score=321.30 Aligned_cols=358 Identities=13% Similarity=0.153 Sum_probs=236.7
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCC--------------
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEK-------------- 74 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~-------------- 74 (479)
.+|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+++ .|+++++++...+.
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhcccccc
Confidence 35899999999999999999999999999999999999887777777 89999999865310
Q ss_pred ----CC----CC--CHH---HHHHHHHHhch-----H-HHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEc
Q 011687 75 ----NE----PK--DFF---AIEKVIENIMP-----I-HLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFW 135 (479)
Q Consensus 75 ----~~----~~--~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~ 135 (479)
+. .. .+. ..+..+...+. . .+.++++.+++ .+||+||+|.+++++..+|+.+|||++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-WRPDLVIWEPLTFAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-HCCSEEEECTTCTHHHHHHHHHTCCEEEEC
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-cCCCEEEecCcchhHHHHHHHcCCCEEEEe
Confidence 00 10 111 11111211111 2 34444333222 299999999977899999999999999986
Q ss_pred chhHHHHHHHhhhhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhh-h-----c
Q 011687 136 PAMLATYCLIDAIPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLER-S-----R 209 (479)
Q Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~ 209 (479)
..+............. .++.|... . .......+..+...+.. . .
T Consensus 173 ~~~~~~~~~~~~~~~~--~~~~~~~~----------------------~------~~~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 173 WGPDITTRARQNFLGL--LPDQPEEH----------------------R------EDPLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp SSCCHHHHHHHHHHHH--GGGSCTTT----------------------C------CCHHHHHHHHHHHHTTCCCCCGGGT
T ss_pred cCCCcchhhhhhhhhh--cccccccc----------------------c------cchHHHHHHHHHHHcCCCCCCcccc
Confidence 5432211110000000 00000000 0 00111222223322211 0 0
Q ss_pred CCceEEEcCchhhhhhhhhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCc
Q 011687 210 NLKWLLVNSFPEEYMDDIKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSW 289 (479)
Q Consensus 210 ~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~ 289 (479)
..+..+....+.++++. .++ . ..+++.... .+.++.+|++..+++++|||++||
T Consensus 223 ~~~~~l~~~~~~~~~~~------------~~~-~-~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~v~~Gs- 276 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRLDT------------GLK-T-VGMRYVDYN-----------GPSVVPEWLHDEPERRRVCLTLGI- 276 (441)
T ss_dssp SCSSEEECSCGGGSCCC------------CCC-E-EECCCCCCC-----------SSCCCCGGGSSCCSSCEEEEEC---
T ss_pred CCCeEEEecCccccCCC------------CCC-C-CceeeeCCC-----------CCcccchHhhcCCCCCEEEEECCC-
Confidence 12334444444443211 121 1 122222111 112245798765677899999999
Q ss_pred cccC---CHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhH
Q 011687 290 VSPI---GEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNS 366 (479)
Q Consensus 290 ~~~~---~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s 366 (479)
.... ..+.+..+++++...+++++|++++.....+. ..+ +|+++++|+||.++|+.+++ ||||||+||
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~--~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t 347 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIP--DNVRTVGFVPMHALLPTCAA--TVHHGGPGS 347 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCC--SSEEECCSCCHHHHGGGCSE--EEECCCHHH
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCC--CCEEEecCCCHHHHHhhCCE--EEECCCHHH
Confidence 6543 34667888999999999999998754322221 123 79999999999999999888 999999999
Q ss_pred HHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 367 TMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 367 ~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
+.||+++|+|+|++|...||+.||+++++ .|+|+.++. +++++|.++|+++|+|++++++++++++++.+.
T Consensus 348 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 420 (441)
T 2yjn_A 348 WHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAE 420 (441)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999 899999875 799999999999999999999999999999874
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=7.9e-36 Score=298.13 Aligned_cols=341 Identities=15% Similarity=0.164 Sum_probs=222.3
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCC-------------
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEK------------- 74 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~------------- 74 (479)
+.+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.. .|+.+..++.....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCccc
Confidence 357999999999999999999999999999999999999887777877 78888888642110
Q ss_pred CCCCCHHHHHHH----HHHh---chHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHHhh
Q 011687 75 NEPKDFFAIEKV----IENI---MPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLIDA 147 (479)
Q Consensus 75 ~~~~~~~~~~~~----~~~~---~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 147 (479)
.........+.. +... ....+.++++++ +||+|++|...+++..+|+.+|||++.+.............
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~ 163 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW----KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA 163 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH
Confidence 011111111111 1111 122333444444 99999999877889999999999999875432111000000
Q ss_pred hhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHh--hhcCCceEEEcCchhhhhh
Q 011687 148 IPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLE--RSRNLKWLLVNSFPEEYMD 225 (479)
Q Consensus 148 ~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~l~~~ 225 (479)
....+......+. .....+..+....+.+..+
T Consensus 164 ----------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 4fzr_A 164 ----------------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ 197 (398)
T ss_dssp ----------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC--
T ss_pred ----------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC
Confidence 0000000111110 0011233444443433322
Q ss_pred hhhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccC--------CHHH
Q 011687 226 DIKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPI--------GEEK 297 (479)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~--------~~~~ 297 (479)
... ....+.++++.. ....+.+|+...+++++|||++|| .... ..+.
T Consensus 198 ~~~-----------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v~v~~G~-~~~~~~~~~~~~~~~~ 252 (398)
T 4fzr_A 198 PKP-----------GTTKMRYVPYNG-------------RNDQVPSWVFEERKQPRLCLTFGT-RVPLPNTNTIPGGLSL 252 (398)
T ss_dssp --C-----------CCEECCCCCCCC-------------SSCCCCHHHHSCCSSCEEECC-----------------CCS
T ss_pred CCC-----------CCCCeeeeCCCC-------------CCCCCchhhhcCCCCCEEEEEccC-cccccccccccchHHH
Confidence 100 011122222110 111234677655677899999999 5432 4466
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcce
Q 011687 298 VKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRL 377 (479)
Q Consensus 298 ~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~ 377 (479)
+..+++++.+.+.+++|+.++.....+ +..+ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+
T Consensus 253 ~~~~~~al~~~~~~~v~~~~~~~~~~l-----~~~~--~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 253 LQALSQELPKLGFEVVVAVSDKLAQTL-----QPLP--EGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp HHHHHHHGGGGTCEEEECCCC-------------CC--TTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCCEEEEEeCCcchhhh-----ccCC--CcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCE
Confidence 888999999999999988875432111 1234 89999999999999999998 99999999999999999999
Q ss_pred ecccCccchhhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 378 LCYPVAGDQFINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 378 l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
|++|...||+.||+++++ .|+|..++. ++++.|.++|+++|+|+++++++.+.++++.+.
T Consensus 324 v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~ 385 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATL 385 (398)
T ss_dssp EECCCSGGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTS
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999 899999865 799999999999999999999999999999884
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.2e-35 Score=294.92 Aligned_cols=334 Identities=16% Similarity=0.181 Sum_probs=232.2
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCC---------------
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLE--------------- 73 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~--------------- 73 (479)
+.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++. .|+.++.++....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 46999999999999999999999999999999999999 77777877 8999999985421
Q ss_pred --------CCCCCCHHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHH
Q 011687 74 --------KNEPKDFFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLI 145 (479)
Q Consensus 74 --------~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 145 (479)
..........+..........+.++++++ +||+||+|...+++..+|+.+|||++............
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~- 167 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGM- 167 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTH-
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccch-
Confidence 11111222222333333444555666666 99999999888889999999999999864221000000
Q ss_pred hhhhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhh-hcCCceEEEcCchhhhh
Q 011687 146 DAIPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLER-SRNLKWLLVNSFPEEYM 224 (479)
Q Consensus 146 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~ 224 (479)
. .............+.. ....+..+....+.+..
T Consensus 168 ------------------------~---------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T 3oti_A 168 ------------------------H---------------------RSIASFLTDLMDKHQVSLPEPVATIESFPPSLLL 202 (398)
T ss_dssp ------------------------H---------------------HHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGT
T ss_pred ------------------------h---------------------hHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCC
Confidence 0 0000001111111110 11223344333333332
Q ss_pred hhhhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCcccc--CCHHHHHHHH
Q 011687 225 DDIKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSP--IGEEKVKTLA 302 (479)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~--~~~~~~~~l~ 302 (479)
+... . .++ +.++ |. . ....+.+|+....++++|||++|| ... ...+.+..++
T Consensus 203 ~~~~-----~----~~~--~~~~-~~--~-----------~~~~~~~~~~~~~~~~~v~v~~G~-~~~~~~~~~~~~~~~ 256 (398)
T 3oti_A 203 EAEP-----E----GWF--MRWV-PY--G-----------GGAVLGDRLPPVPARPEVAITMGT-IELQAFGIGAVEPII 256 (398)
T ss_dssp TSCC-----C----SBC--CCCC-CC--C-----------CCEECCSSCCCCCSSCEEEECCTT-THHHHHCGGGHHHHH
T ss_pred CCCC-----C----CCC--cccc-CC--C-----------CCcCCchhhhcCCCCCEEEEEcCC-CccccCcHHHHHHHH
Confidence 2100 0 111 1111 10 0 011123576655678899999999 543 2667788999
Q ss_pred HHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccC
Q 011687 303 LTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPV 382 (479)
Q Consensus 303 ~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 382 (479)
+++++.+.+++|+.++... +.+ +..+ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|.
T Consensus 257 ~~l~~~~~~~v~~~g~~~~----~~l-~~~~--~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 257 AAAGEVDADFVLALGDLDI----SPL-GTLP--RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp HHHHTSSSEEEEECTTSCC----GGG-CSCC--TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHcCCCEEEEEECCcCh----hhh-ccCC--CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999876431 111 1234 89999999999999999998 9999999999999999999999999
Q ss_pred ccchhhHH--HHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 383 AGDQFINC--AYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 383 ~~DQ~~nA--~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
..||+.|| +++++ .|+|..++. .+.+.|. ++|+|++++++++++++++.+.
T Consensus 328 ~~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~ 382 (398)
T 3oti_A 328 PRDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVREEMVAL 382 (398)
T ss_dssp TTCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS
T ss_pred CchhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC
Confidence 99999999 99999 899999865 6777766 8889999999999999999884
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.3e-34 Score=288.56 Aligned_cols=338 Identities=15% Similarity=0.137 Sum_probs=230.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeC-CCCCCCC-------------
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSI-PDGLEKN------------- 75 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i-~~~l~~~------------- 75 (479)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.. .|+.+..+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccc
Confidence 4899999999999999999999999999999999999877777777 78999888 4321100
Q ss_pred --CC--CCHHHHHHHHHHhc-------hHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHH
Q 011687 76 --EP--KDFFAIEKVIENIM-------PIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCL 144 (479)
Q Consensus 76 --~~--~~~~~~~~~~~~~~-------~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (479)
.. ......+....... ...+.++++++ +||+|++|...+++..+|+.+|||++.+.........
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~- 150 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW----RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG- 150 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT-
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc----CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc-
Confidence 00 01111111111112 22334455555 9999999987788899999999999987432100000
Q ss_pred HhhhhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhh--cCCceEEEcCchhh
Q 011687 145 IDAIPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERS--RNLKWLLVNSFPEE 222 (479)
Q Consensus 145 ~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~s~~~l 222 (479)
.. ..............+... ...+..+....+++
T Consensus 151 -----------------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (391)
T 3tsa_A 151 -----------------------------------------PF---SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSL 186 (391)
T ss_dssp -----------------------------------------HH---HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGG
T ss_pred -----------------------------------------cc---cchHHHHHHHHHHHcCCCCCCCCceEEEecChhh
Confidence 00 000011111122222100 11244454444444
Q ss_pred hhhhhhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCcccc---CCHHHHH
Q 011687 223 YMDDIKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSP---IGEEKVK 299 (479)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~---~~~~~~~ 299 (479)
..+.. .....+.++ |.. ....+..|+...+++++|++++|| ... .+.+.+.
T Consensus 187 ~~~~~-----------~~~~~~~~~-p~~-------------~~~~~~~~~~~~~~~~~vlv~~G~-~~~~~~~~~~~~~ 240 (391)
T 3tsa_A 187 QASDA-----------PQGAPVQYV-PYN-------------GSGAFPAWGAARTSARRVCICMGR-MVLNATGPAPLLR 240 (391)
T ss_dssp SCTTS-----------CCCEECCCC-CCC-------------CCEECCGGGSSCCSSEEEEEECCH-HHHHHHCSHHHHH
T ss_pred cCCCC-----------CccCCeeee-cCC-------------CCcCCCchhhcCCCCCEEEEEcCC-CCCcccchHHHHH
Confidence 32211 001122232 110 011223577655678899999999 532 3377888
Q ss_pred HHHHHHHhC-CCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCccee
Q 011687 300 TLALTLEAL-GLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLL 378 (479)
Q Consensus 300 ~l~~al~~~-~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l 378 (479)
.++++ ++. +.+++|+.++.....+. ..+ +|+.+.+|+|+.++|+.+++ ||||||.||+.||+++|+|+|
T Consensus 241 ~~~~~-~~~p~~~~v~~~~~~~~~~l~-----~~~--~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 241 AVAAA-TELPGVEAVIAVPPEHRALLT-----DLP--DNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp HHHHH-HTSTTEEEEEECCGGGGGGCT-----TCC--TTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHHh-ccCCCeEEEEEECCcchhhcc-----cCC--CCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 88898 888 77888887754221121 223 89999999999999999888 999999999999999999999
Q ss_pred cccCccchhhHHHHHHHHhcceeeeCC----CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 379 CYPVAGDQFINCAYIVKMWKIGIRVNG----FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 379 ~~P~~~DQ~~nA~rv~~~~Gvg~~~~~----~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
++|...||+.|+.++++ .|+|..+.. .+++.|.+++.++|+|+++++++.++++.+.+.
T Consensus 311 ~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~ 373 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAM 373 (391)
T ss_dssp ECCCSTTHHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTS
T ss_pred ecCCcccHHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999 899999976 899999999999999999999999999999874
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=7.7e-32 Score=270.35 Aligned_cols=343 Identities=17% Similarity=0.187 Sum_probs=236.8
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCC------------C-
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLE------------K- 74 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~------------~- 74 (479)
..+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.. .|+.++.++.... .
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-----LGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-----TTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-----cCCceeecCcccccchhhhhhhhhccc
Confidence 357999999999999999999999999999999999999877666776 7999998884100 0
Q ss_pred --------CCCCCHHHHHHHH-HHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchhHHHHHHH
Q 011687 75 --------NEPKDFFAIEKVI-ENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAMLATYCLI 145 (479)
Q Consensus 75 --------~~~~~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 145 (479)
.........+... .......+.++++++ +||+||+|...+++..+|+.+|||+|.+...........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~ 168 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLT 168 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHH
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhh
Confidence 0011112222211 111223345555555 999999998778888999999999998643311000000
Q ss_pred hhhhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhh-------hcCCceEEEcC
Q 011687 146 DAIPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLER-------SRNLKWLLVNS 218 (479)
Q Consensus 146 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~s 218 (479)
. .....+..+...+.. ....+.++..+
T Consensus 169 ~----------------------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~ 202 (412)
T 3otg_A 169 R----------------------------------------------SIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIF 202 (412)
T ss_dssp H----------------------------------------------HHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECS
T ss_pred H----------------------------------------------HHHHHHHHHHHHcCCCCCcccccCCCCeEEeeC
Confidence 0 000001111111100 02234455555
Q ss_pred chhhhhhhhhhhhhcccccccCCCceeEeccccccccccCCCCCcccchhhhhh-hcCCCCCcEEEEEeCCccccCCHHH
Q 011687 219 FPEEYMDDIKQQYHHSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDW-LDNQKPNSVIYISFGSWVSPIGEEK 297 (479)
Q Consensus 219 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~Vyvs~Gs~~~~~~~~~ 297 (479)
.+.++.+... +..... |+..... .......+| ....+++++|++++|| ......+.
T Consensus 203 ~~~~~~~~~~-----------~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~vlv~~G~-~~~~~~~~ 259 (412)
T 3otg_A 203 PPSLQEPEFR-----------ARPRRH---ELRPVPF--------AEQGDLPAWLSSRDTARPLVYLTLGT-SSGGTVEV 259 (412)
T ss_dssp CGGGSCHHHH-----------TCTTEE---ECCCCCC--------CCCCCCCGGGGGSCTTSCEEEEECTT-TTCSCHHH
T ss_pred CHHhcCCccc-----------CCCCcc---eeeccCC--------CCCCCCCCccccccCCCCEEEEEcCC-CCcCcHHH
Confidence 4554432211 111111 1111111 001112345 2224567899999999 66667888
Q ss_pred HHHHHHHHHhCCCCeEEEEcCCc-CCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHHhCcc
Q 011687 298 VKTLALTLEALGLPFIWVLGFAW-REGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKR 376 (479)
Q Consensus 298 ~~~l~~al~~~~~~~iw~~~~~~-~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP 376 (479)
+..+++++.+.+.+++|++++.. ...+. +.+ +|+.+.+|+|+.++|+++++ ||+|||++|+.||+++|+|
T Consensus 260 ~~~~~~~l~~~~~~~~~~~g~~~~~~~l~-----~~~--~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P 330 (412)
T 3otg_A 260 LRAAIDGLAGLDADVLVASGPSLDVSGLG-----EVP--ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVP 330 (412)
T ss_dssp HHHHHHHHHTSSSEEEEECCSSCCCTTCC-----CCC--TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCEEEEEECCCCChhhhc-----cCC--CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCC
Confidence 99999999998999999888653 11121 223 79999999999999999998 9999999999999999999
Q ss_pred eecccCccchhhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHccc
Q 011687 377 LLCYPVAGDQFINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 377 ~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~ 438 (479)
+|++|...||..|++++++ .|+|..+.. +++++|++++.++|+|+++++++.+.++++...
T Consensus 331 ~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~ 393 (412)
T 3otg_A 331 QLSFPWAGDSFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAM 393 (412)
T ss_dssp EEECCCSTTHHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS
T ss_pred EEecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999 899999975 699999999999999999999999999998874
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=6e-29 Score=244.76 Aligned_cols=335 Identities=16% Similarity=0.149 Sum_probs=211.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcc--ccccccCCCCCCCeEEEeCCC-CCCCCCC----CCHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFI--HNQITSSMDPRSEISCMSIPD-GLEKNEP----KDFFA 82 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~--~~~i~~~~~~~~g~~~~~i~~-~l~~~~~----~~~~~ 82 (479)
++||++...|+.||++|+++||++|+++||+|+|++++.- .+.+++ .|+.++.++. ++..... .....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~~~~~~~~~~~~~~~~~ 76 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVSGLRGKGLKSLVKAPLE 76 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-----GTCCEEECC--------------CHHH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-----cCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence 3689999988899999999999999999999999997642 234555 7888888873 3332211 11222
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCC
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDT 160 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~ 160 (479)
++..+. ....+++++ +||+||.+..+ ..+..+|+.+|||+++.-.
T Consensus 77 ~~~~~~-----~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------------------ 123 (365)
T 3s2u_A 77 LLKSLF-----QALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------------------ 123 (365)
T ss_dssp HHHHHH-----HHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC------------------------
T ss_pred HHHHHH-----HHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec------------------------
Confidence 222222 234566676 99999998655 3456789999999997310
Q ss_pred CCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccC
Q 011687 161 GSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLC 240 (479)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~ 240 (479)
+.+++. .+++ +. +.++.+ +.++++.. ..
T Consensus 124 ----------n~~~G~---------------------~nr~---l~--~~a~~v-~~~~~~~~---------------~~ 151 (365)
T 3s2u_A 124 ----------NAVAGT---------------------ANRS---LA--PIARRV-CEAFPDTF---------------PA 151 (365)
T ss_dssp ----------SSSCCH---------------------HHHH---HG--GGCSEE-EESSTTSS---------------CC
T ss_pred ----------chhhhh---------------------HHHh---hc--ccccee-eecccccc---------------cC
Confidence 011110 1111 11 223333 33334321 11
Q ss_pred CCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCC----CCeEEEE
Q 011687 241 RPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALG----LPFIWVL 316 (479)
Q Consensus 241 ~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~----~~~iw~~ 316 (479)
..++.++|........ . ... ......++++.|+|..|| ... ....+.+.+++..+. ..++|.+
T Consensus 152 ~~k~~~~g~pvr~~~~----~--~~~----~~~~~~~~~~~ilv~gGs-~g~--~~~~~~~~~al~~l~~~~~~~vi~~~ 218 (365)
T 3s2u_A 152 SDKRLTTGNPVRGELF----L--DAH----ARAPLTGRRVNLLVLGGS-LGA--EPLNKLLPEALAQVPLEIRPAIRHQA 218 (365)
T ss_dssp ---CEECCCCCCGGGC----C--CTT----SSCCCTTSCCEEEECCTT-TTC--SHHHHHHHHHHHTSCTTTCCEEEEEC
T ss_pred cCcEEEECCCCchhhc----c--chh----hhcccCCCCcEEEEECCc-CCc--cccchhhHHHHHhcccccceEEEEec
Confidence 3567788844332210 0 000 111223466789999898 543 334455667777653 3456666
Q ss_pred cCCcCCCCChhhHhhhcCCCCceEEeeeehH-HhhcccCccceEeccchhHHHHHHHhCcceecccCc----cchhhHHH
Q 011687 317 GFAWREGLPDGYLDRVSNSRQGKVVPWAPQL-KVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVA----GDQFINCA 391 (479)
Q Consensus 317 ~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~-~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~nA~ 391 (479)
+....+.+. ...++.+ .++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|++|.. .+|..||+
T Consensus 219 G~~~~~~~~-~~~~~~~--~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 219 GRQHAEITA-ERYRTVA--VEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp CTTTHHHHH-HHHHHTT--CCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred Ccccccccc-ceecccc--cccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 543211111 1122333 788999999975 69999999 99999999999999999999999864 58999999
Q ss_pred HHHHHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 392 YIVKMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 392 rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
.+++ .|+|..++. ++++.|.++|.++++|++.++++.+-+.++... ++.+++++.++++.|
T Consensus 294 ~l~~-~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~--------~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 294 FLVR-SGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKP--------EATRTVVDACLEVAR 356 (365)
T ss_dssp HHHT-TTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCT--------THHHHHHHHHHHHC-
T ss_pred HHHH-CCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCc--------cHHHHHHHHHHHHHc
Confidence 9999 899999965 899999999999999988666554444444331 456667777766665
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3e-27 Score=207.00 Aligned_cols=162 Identities=25% Similarity=0.355 Sum_probs=137.1
Q ss_pred ccchhhhhhhcCCCCCcEEEEEeCCccc-cCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEe
Q 011687 264 EEDKSCIDWLDNQKPNSVIYISFGSWVS-PIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVP 342 (479)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~-~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~ 342 (479)
+.+.++.+|++..+++++|||++|| .. ..+.+.+..+++++++.+++++|++++.....+ + +|+.+.+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs-~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~--------~--~~v~~~~ 74 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGS-MVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTL--------G--LNTRLYK 74 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCS-CCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTC--------C--TTEEEES
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCC-CcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccC--------C--CcEEEec
Confidence 3456788999866677899999999 54 467888999999999889999999975432222 2 7999999
Q ss_pred eeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCC--CCHHHHHHHHHHHhc
Q 011687 343 WAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG--FGKRDIEDGLKKLKE 420 (479)
Q Consensus 343 ~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~--~~~~~i~~~i~~vl~ 420 (479)
|+||.+++.|+.+++||||||++|+.||+++|+|+|++|...||..||+++++ .|+|..++. ++.++|.++|+++++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHHc
Confidence 99999999655555599999999999999999999999999999999999999 899999875 799999999999999
Q ss_pred CHHHHHHHHHHHHHHcc
Q 011687 421 DSEMKHRLMNLYMRTMG 437 (479)
Q Consensus 421 ~~~~~~~a~~l~~~~~~ 437 (479)
|++++++++++++.+++
T Consensus 154 ~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 154 DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp CHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 99999999999988763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=1.1e-20 Score=185.91 Aligned_cols=317 Identities=13% Similarity=0.050 Sum_probs=199.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcc--ccccccCCCCCCCeEEEeCCCC-CCCCCCCCHHHHHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFI--HNQITSSMDPRSEISCMSIPDG-LEKNEPKDFFAIEKV 86 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~--~~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~~~~~~~ 86 (479)
.|||++++.+..||..+++.|+++|.++||+|++++.... ...+.+ .|+.++.++.. +... .....+..
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~---~~~~~~~~ 77 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-----HGIEIDFIRISGLRGK---GIKALIAA 77 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCCCCTTC---CHHHHHTC
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-----cCCceEEecCCccCcC---ccHHHHHH
Confidence 3899999988789999999999999999999999998642 123443 57888777632 2111 11111111
Q ss_pred HHHh--chHHHHHHHHHhhccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCC
Q 011687 87 IENI--MPIHLERLINKINEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGS 162 (479)
Q Consensus 87 ~~~~--~~~~l~~~l~~l~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 162 (479)
.... ....+.+++++. +||+|+++... ..+..++..+|+|+|......
T Consensus 78 ~~~~~~~~~~l~~~l~~~----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------------ 129 (364)
T 1f0k_A 78 PLRIFNAWRQARAIMKAY----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------------ 129 (364)
T ss_dssp HHHHHHHHHHHHHHHHHH----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS------------------------
T ss_pred HHHHHHHHHHHHHHHHhc----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC------------------------
Confidence 1110 112234455555 99999998643 345678889999998642110
Q ss_pred CCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccCCC
Q 011687 163 PQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLCRP 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 242 (479)
+++ ... +.. .+..+.+++.+... + +
T Consensus 130 ----------~~~---------------------~~~---~~~--~~~~d~v~~~~~~~------------------~-~ 154 (364)
T 1f0k_A 130 ----------IAG---------------------LTN---KWL--AKIATKVMQAFPGA------------------F-P 154 (364)
T ss_dssp ----------SCC---------------------HHH---HHH--TTTCSEEEESSTTS------------------S-S
T ss_pred ----------CCc---------------------HHH---HHH--HHhCCEEEecChhh------------------c-C
Confidence 000 000 011 13445555543211 1 2
Q ss_pred ceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC--CCCeEEEEcCCc
Q 011687 243 KVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL--GLPFIWVLGFAW 320 (479)
Q Consensus 243 ~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~--~~~~iw~~~~~~ 320 (479)
++..+|.-..... ...+.. .+.+....++++|++..|+ .. .......+++|+..+ +.++++.++.+.
T Consensus 155 ~~~~i~n~v~~~~-------~~~~~~-~~~~~~~~~~~~il~~~g~-~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~ 223 (364)
T 1f0k_A 155 NAEVVGNPVRTDV-------LALPLP-QQRLAGREGPVRVLVVGGS-QG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS 223 (364)
T ss_dssp SCEECCCCCCHHH-------HTSCCH-HHHHTTCCSSEEEEEECTT-TC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC
T ss_pred CceEeCCccchhh-------cccchh-hhhcccCCCCcEEEEEcCc-hH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch
Confidence 4445553221111 000000 1122222345678888888 32 355566677777765 455666676543
Q ss_pred CCCCChhhHhhhcC-C-CCceEEeeee-hHHhhcccCccceEeccchhHHHHHHHhCcceecccCc---cchhhHHHHHH
Q 011687 321 REGLPDGYLDRVSN-S-RQGKVVPWAP-QLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVA---GDQFINCAYIV 394 (479)
Q Consensus 321 ~~~l~~~~~~~~~~-~-~nv~~~~~~p-q~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~nA~rv~ 394 (479)
. +.+.+.+.. + +||.+.+|++ ...+++.+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+.
T Consensus 224 ~----~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~ 297 (364)
T 1f0k_A 224 Q----QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 297 (364)
T ss_dssp H----HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred H----HHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH
Confidence 1 223222211 1 4799999994 4779999999 99999999999999999999999988 79999999999
Q ss_pred HHhcceeeeCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcc
Q 011687 395 KMWKIGIRVNG--FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMG 437 (479)
Q Consensus 395 ~~~Gvg~~~~~--~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~ 437 (479)
+ .|.|..++. ++.++++++|.++ |++.++++.+-+.+..+
T Consensus 298 ~-~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~ 339 (364)
T 1f0k_A 298 K-AGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASI 339 (364)
T ss_dssp H-TTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCC
T ss_pred h-CCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhc
Confidence 9 799998876 6699999999998 88877776666655543
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.68 E-value=1.7e-15 Score=141.63 Aligned_cols=262 Identities=13% Similarity=0.062 Sum_probs=164.3
Q ss_pred CEEEEecCC----CCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHH
Q 011687 11 NKILMVPYP----AQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKV 86 (479)
Q Consensus 11 ~~i~~~~~~----~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~ 86 (479)
|||+|..-+ |.||+.+|+.||++|. +|+|++.......++. .|+....++.. +
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~-----~g~~v~~l~~~-------d------- 57 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE-----IPYPVYELSSE-------S------- 57 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG-----CCSCEEECSSS-------C-------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH-----CCCeEEEcCcc-------C-------
Confidence 577777743 6699999999999997 8999997543344444 47777766531 1
Q ss_pred HHHhchHHHHHHHHHhhccCCceEEEeCCCcccHH---HHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCCC
Q 011687 87 IENIMPIHLERLINKINEDGRVACVVVDLLASSAI---GVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGSP 163 (479)
Q Consensus 87 ~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~---~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~ 163 (479)
...+.+++++. ++|+||.|.+..... .+.+..+++++.+ +.
T Consensus 58 -----~~~~~~~l~~~----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i--------------------------DD- 101 (282)
T 3hbm_A 58 -----IYELINLIKEE----KFELLIIDHYGISVDDEKLIKLETGVKILSF--------------------------DD- 101 (282)
T ss_dssp -----HHHHHHHHHHH----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEE--------------------------CS-
T ss_pred -----HHHHHHHHHhC----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEE--------------------------ec-
Confidence 11234455555 899999999775443 2233357888775 10
Q ss_pred CccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccCC-C
Q 011687 164 QHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLCR-P 242 (479)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~-~ 242 (479)
. .+ + ..+ .+++|..+.-+.. . |-. ..+ .
T Consensus 102 -----~-~~-~----------------------------------~~~-Dllin~~~~~~~~--~--Y~~-----~~p~~ 130 (282)
T 3hbm_A 102 -----E-IK-P----------------------------------HHC-DILLNVNAYAKAS--D--YEG-----LVPFK 130 (282)
T ss_dssp -----S-CC-C----------------------------------CCC-SEEEECSTTCCGG--G--GTT-----TCC-C
T ss_pred -----C-CC-c----------------------------------ccC-CEEEeCCcccchh--h--ccc-----cCCCC
Confidence 0 00 0 112 2344433322210 0 110 112 2
Q ss_pred ceeEecc---ccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCC
Q 011687 243 KVLLVGP---LSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFA 319 (479)
Q Consensus 243 ~v~~vGp---l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~ 319 (479)
..++.|| ++.++- .. .... ..++.+.|+|++|. . ........+++++.... ++.++++.+
T Consensus 131 ~~~l~G~~Y~~lR~eF-------~~----~~~~--~r~~~~~ILv~~GG-~--d~~~l~~~vl~~L~~~~-~i~vv~G~~ 193 (282)
T 3hbm_A 131 CEVRCGFSYALIREEF-------YQ----EAKE--NRKKKYDFFICMGG-T--DIKNLSLQIASELPKTK-IISIATSSS 193 (282)
T ss_dssp CEEEESGGGCCCCHHH-------HH----HTTC--CCCCCEEEEEECCS-C--CTTCHHHHHHHHSCTTS-CEEEEECTT
T ss_pred CeEeeCCcccccCHHH-------HH----hhhh--ccccCCeEEEEECC-C--chhhHHHHHHHHhhcCC-CEEEEECCC
Confidence 3457787 222110 00 0000 12346689999998 3 23346667778876643 566667654
Q ss_pred cCCCCChhhHhhhcCCCCceEEeeeehH-HhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhc
Q 011687 320 WREGLPDGYLDRVSNSRQGKVVPWAPQL-KVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWK 398 (479)
Q Consensus 320 ~~~~l~~~~~~~~~~~~nv~~~~~~pq~-~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~G 398 (479)
.. ..+.+.+.....+|+.+..|+++. ++++.+++ +|++|| +|+.|+++.|+|.|++|...+|..||+.+++ .|
T Consensus 194 ~~--~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G 267 (282)
T 3hbm_A 194 NP--NLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KG 267 (282)
T ss_dssp CT--THHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TT
T ss_pred ch--HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CC
Confidence 21 223332222212589999999876 59999998 999999 8999999999999999999999999999999 89
Q ss_pred ceeeeCC
Q 011687 399 IGIRVNG 405 (479)
Q Consensus 399 vg~~~~~ 405 (479)
++..+..
T Consensus 268 ~~~~~~~ 274 (282)
T 3hbm_A 268 YEVEYKY 274 (282)
T ss_dssp CEEECGG
T ss_pred CEEEcch
Confidence 9998864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=2.9e-15 Score=134.39 Aligned_cols=134 Identities=10% Similarity=0.144 Sum_probs=97.1
Q ss_pred CCCCcEEEEEeCCccccCCHHHHHHH-----HHHHHhCC-CCeEEEEcCCcCCCCChhhHhhh---------c-------
Q 011687 276 QKPNSVIYISFGSWVSPIGEEKVKTL-----ALTLEALG-LPFIWVLGFAWREGLPDGYLDRV---------S------- 333 (479)
Q Consensus 276 ~~~~~~Vyvs~Gs~~~~~~~~~~~~l-----~~al~~~~-~~~iw~~~~~~~~~l~~~~~~~~---------~------- 333 (479)
..++++|||+.|| ... -.+.+..+ ++++...+ .++++.+|....... +...+.. +
T Consensus 25 ~~~~~~VlVtgGS-~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~ 101 (224)
T 2jzc_A 25 IIEEKALFVTCGA-TVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF-EHLVQERGGQRESQKIPIDQFGCG 101 (224)
T ss_dssp CCCSCCEEEECCS-CCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC-CSHHHHHTCEECSCCCSSCTTCTT
T ss_pred CCCCCEEEEEcCC-chH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH-HHHHHhhhcccccccccccccccc
Confidence 3567899999999 532 24444444 38888777 789888886532111 1111010 0
Q ss_pred --------CCC--CceEEeeeehH-Hhhc-ccCccceEeccchhHHHHHHHhCcceecccCc----cchhhHHHHHHHHh
Q 011687 334 --------NSR--QGKVVPWAPQL-KVLQ-HNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVA----GDQFINCAYIVKMW 397 (479)
Q Consensus 334 --------~~~--nv~~~~~~pq~-~lL~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~nA~rv~~~~ 397 (479)
... ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++ .
T Consensus 102 ~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~-~ 178 (224)
T 2jzc_A 102 DTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE-L 178 (224)
T ss_dssp CSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH-H
T ss_pred ccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH-C
Confidence 002 34455787775 7999 9999 99999999999999999999999974 369999999999 8
Q ss_pred cceeeeCCCCHHHHHHHHHHH
Q 011687 398 KIGIRVNGFGKRDIEDGLKKL 418 (479)
Q Consensus 398 Gvg~~~~~~~~~~i~~~i~~v 418 (479)
|++..+ +.+.|.++|+++
T Consensus 179 G~~~~~---~~~~L~~~i~~l 196 (224)
T 2jzc_A 179 GYVWSC---APTETGLIAGLR 196 (224)
T ss_dssp SCCCEE---CSCTTTHHHHHH
T ss_pred CCEEEc---CHHHHHHHHHHH
Confidence 999765 677788888776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.50 E-value=3.4e-11 Score=120.93 Aligned_cols=375 Identities=14% Similarity=0.073 Sum_probs=189.9
Q ss_pred CCCCEEEEecC-----------CCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCC-
Q 011687 8 KKKNKILMVPY-----------PAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKN- 75 (479)
Q Consensus 8 ~~~~~i~~~~~-----------~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~- 75 (479)
+++|||++++. ...|+-..+..+++.|.++||+|++++.......-.. .....|+.++.++......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~-~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI-VRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE-EEEETTEEEEEECCSCSSSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc-ccccCCeEEEEecCCCcccc
Confidence 35699999994 2468888999999999999999999997532111000 0001567777776432211
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHH-hhccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhh
Q 011687 76 EPKDFFAIEKVIENIMPIHLERLINK-INEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMI 152 (479)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (479)
........+..+. ..+++. ++...+||+|++.... ..+..++..+++|+|..........
T Consensus 97 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---------- 159 (438)
T 3c48_A 97 SKEELPTQLAAFT-------GGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---------- 159 (438)
T ss_dssp CGGGGGGGHHHHH-------HHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH----------
T ss_pred chhHHHHHHHHHH-------HHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc----------
Confidence 0111111111111 112222 1222249999987532 2345677889999988643321110
Q ss_pred hcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhh
Q 011687 153 KSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYH 232 (479)
Q Consensus 153 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 232 (479)
... + ... ............ ......++.+++.+....+.-.- .+
T Consensus 160 -~~~----------------~------~~~---------~~~~~~~~~~~~-~~~~~~~d~ii~~s~~~~~~~~~---~~ 203 (438)
T 3c48_A 160 -NSY----------------R------DDS---------DTPESEARRICE-QQLVDNADVLAVNTQEEMQDLMH---HY 203 (438)
T ss_dssp -SCC-----------------------------------CCHHHHHHHHHH-HHHHHHCSEEEESSHHHHHHHHH---HH
T ss_pred -ccc----------------c------ccc---------CCcchHHHHHHH-HHHHhcCCEEEEcCHHHHHHHHH---Hh
Confidence 000 0 000 000001111111 11235677888888554432111 01
Q ss_pred cccccccCCCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC----
Q 011687 233 HSKGATLCRPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL---- 308 (479)
Q Consensus 233 ~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~---- 308 (479)
.- -..++..+..-..... ...........+.+-+.. .+...+++..|+ ... .+-+..+++|+..+
T Consensus 204 g~-----~~~k~~vi~ngvd~~~--~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~-~~~--~Kg~~~li~a~~~l~~~~ 272 (438)
T 3c48_A 204 DA-----DPDRISVVSPGADVEL--YSPGNDRATERSRRELGI-PLHTKVVAFVGR-LQP--FKGPQVLIKAVAALFDRD 272 (438)
T ss_dssp CC-----CGGGEEECCCCCCTTT--SCCC----CHHHHHHTTC-CSSSEEEEEESC-BSG--GGCHHHHHHHHHHHHHHC
T ss_pred CC-----ChhheEEecCCccccc--cCCcccchhhhhHHhcCC-CCCCcEEEEEee-ecc--cCCHHHHHHHHHHHHhhC
Confidence 00 0134555553222111 000000000112222331 233467778888 432 22233344444332
Q ss_pred -CCCe-EEEEcCCcC-CCCChhh---HhhhcCCCCceEEeeeehH---HhhcccCccceEec----cchhHHHHHHHhCc
Q 011687 309 -GLPF-IWVLGFAWR-EGLPDGY---LDRVSNSRQGKVVPWAPQL---KVLQHNAVGFYLTH----CGWNSTMEAIQSGK 375 (479)
Q Consensus 309 -~~~~-iw~~~~~~~-~~l~~~~---~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~I~H----gG~~s~~eal~~Gv 375 (479)
+..+ ++.+|.... ....+.+ .++....++|.+.+++|+. .++..+++ +|.- |...++.||+++|+
T Consensus 273 p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~ 350 (438)
T 3c48_A 273 PDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGT 350 (438)
T ss_dssp TTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTC
T ss_pred CCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCC
Confidence 1233 344443110 0111222 2222122789999999874 57888888 7754 33578999999999
Q ss_pred ceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHH----HHHHHHHHcccccCCCchhHHHHH
Q 011687 376 RLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHR----LMNLYMRTMGDDGARARVMNNLTG 451 (479)
Q Consensus 376 P~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~----a~~l~~~~~~~~~~g~~~~~~~~~ 451 (479)
|+|+.+. ......+++ -+.|..++.-+.++++++|.++++|++.+++ +++..+.+. .....++
T Consensus 351 PvI~~~~----~~~~e~i~~-~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~ 417 (438)
T 3c48_A 351 PVIAARV----GGLPIAVAE-GETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFS--------WAATAAQ 417 (438)
T ss_dssp CEEEESC----TTHHHHSCB-TTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred CEEecCC----CChhHHhhC-CCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC--------HHHHHHH
Confidence 9999765 356666777 5788888878999999999999988765443 344333322 3345555
Q ss_pred HHHHHHhhhcC
Q 011687 452 FVDDLSKLTRN 462 (479)
Q Consensus 452 ~~~~~~~~~~~ 462 (479)
+.+.++.....
T Consensus 418 ~~~~~~~~~~~ 428 (438)
T 3c48_A 418 LSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhh
Confidence 55555555443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.49 E-value=3.4e-12 Score=126.14 Aligned_cols=356 Identities=11% Similarity=0.007 Sum_probs=193.2
Q ss_pred CCCEEEEecC--C--CCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHH
Q 011687 9 KKNKILMVPY--P--AQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIE 84 (479)
Q Consensus 9 ~~~~i~~~~~--~--~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~ 84 (479)
++|||++++. + ..|.-..+..+++.| +||+|++++.......... .....++.++.++...... . .
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~--- 72 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA-YDKTLDYEVIRWPRSVMLP---T-P--- 72 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH-HHTTCSSEEEEESSSSCCS---C-H---
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh-hccccceEEEEcccccccc---c-h---
Confidence 3588998874 3 468888899999999 7999999998653221010 0112567777776422111 1 1
Q ss_pred HHHHHhchHHHHHHHHHhhccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCC
Q 011687 85 KVIENIMPIHLERLINKINEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGS 162 (479)
Q Consensus 85 ~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 162 (479)
. ....+.+++++. +||+|++.... .....++..+++|.+++.........
T Consensus 73 ~-----~~~~l~~~~~~~----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------------- 124 (394)
T 3okp_A 73 T-----TAHAMAEIIRER----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------------------- 124 (394)
T ss_dssp H-----HHHHHHHHHHHT----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-------------------
T ss_pred h-----hHHHHHHHHHhc----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-------------------
Confidence 1 112244455555 89999976544 23456688899995553221100000
Q ss_pred CCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccCCC
Q 011687 163 PQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLCRP 242 (479)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 242 (479)
. .........+... ..++.+++.|....+.-... .. ...
T Consensus 125 --------~----------------------~~~~~~~~~~~~~--~~~d~ii~~s~~~~~~~~~~---~~------~~~ 163 (394)
T 3okp_A 125 --------S----------------------MLPGSRQSLRKIG--TEVDVLTYISQYTLRRFKSA---FG------SHP 163 (394)
T ss_dssp --------T----------------------TSHHHHHHHHHHH--HHCSEEEESCHHHHHHHHHH---HC------SSS
T ss_pred --------h----------------------hcchhhHHHHHHH--HhCCEEEEcCHHHHHHHHHh---cC------CCC
Confidence 0 0011112222222 56678888875544322111 11 124
Q ss_pred ceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccc-cCCHHHHHHHHHHHHhC--CCCeEEEEcCC
Q 011687 243 KVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVS-PIGEEKVKTLALTLEAL--GLPFIWVLGFA 319 (479)
Q Consensus 243 ~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~-~~~~~~~~~l~~al~~~--~~~~iw~~~~~ 319 (479)
++..+..-..... ..+........+.+-+.. +++..+++..|+ .. ....+.+-..+..+.+. +.++ ..+|.+
T Consensus 164 ~~~vi~ngv~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~-~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~g 238 (394)
T 3okp_A 164 TFEHLPSGVDVKR--FTPATPEDKSATRKKLGF-TDTTPVIACNSR-LVPRKGQDSLIKAMPQVIAARPDAQL-LIVGSG 238 (394)
T ss_dssp EEEECCCCBCTTT--SCCCCHHHHHHHHHHTTC-CTTCCEEEEESC-SCGGGCHHHHHHHHHHHHHHSTTCEE-EEECCC
T ss_pred CeEEecCCcCHHH--cCCCCchhhHHHHHhcCC-CcCceEEEEEec-cccccCHHHHHHHHHHHHhhCCCeEE-EEEcCc
Confidence 5666653222111 000011111222333332 334467778888 42 23333333333333322 3333 344432
Q ss_pred cCCCCChhhH---hhhcCCCCceEEeeeehHH---hhcccCccceEe-----------ccchhHHHHHHHhCcceecccC
Q 011687 320 WREGLPDGYL---DRVSNSRQGKVVPWAPQLK---VLQHNAVGFYLT-----------HCGWNSTMEAIQSGKRLLCYPV 382 (479)
Q Consensus 320 ~~~~l~~~~~---~~~~~~~nv~~~~~~pq~~---lL~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~P~ 382 (479)
. ..+.+. .... ++|.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+.
T Consensus 239 ~---~~~~l~~~~~~~~--~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~ 311 (394)
T 3okp_A 239 R---YESTLRRLATDVS--QNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTS 311 (394)
T ss_dssp T---THHHHHHHTGGGG--GGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSS
T ss_pred h---HHHHHHHHHhccc--CeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCC
Confidence 2 111121 2233 7899999998655 6788888 776 5666899999999999999776
Q ss_pred ccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHH-HcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 383 AGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLMNLYMR-TMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 383 ~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~~l~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
. .....+.+ |.|..++.-+.++++++|.+++++++.+++..+-+.+ +.+. -+.+...+.+.+.++...|
T Consensus 312 ~----~~~e~i~~--~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 312 G----GAPETVTP--ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAE----WSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp T----TGGGGCCT--TTEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH----TBHHHHHHHHHHHHHSCCC
T ss_pred C----ChHHHHhc--CCceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHhcc
Confidence 4 33444455 4788887788999999999999887755444333222 2221 2355777888888887777
Q ss_pred CCcc
Q 011687 462 NDHQ 465 (479)
Q Consensus 462 ~~~~ 465 (479)
....
T Consensus 382 ~~~~ 385 (394)
T 3okp_A 382 KLAA 385 (394)
T ss_dssp ----
T ss_pred Ccch
Confidence 5553
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.45 E-value=7.2e-12 Score=123.26 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=90.0
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeeh---HHh
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEAL-----GLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQ---LKV 349 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~-----~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq---~~l 349 (479)
+++.|+++.|. ..... .+..+++|+..+ +.++++..+.+. .+.+.+.+.....++|.+.+++++ .++
T Consensus 197 ~~~~vl~~~gr-~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~ 271 (376)
T 1v4v_A 197 EGPYVTVTMHR-RENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAAL 271 (376)
T ss_dssp SSCEEEECCCC-GGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCc-ccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHH
Confidence 34577778886 42221 355566666543 334443334221 011122222111268888866655 478
Q ss_pred hcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011687 350 LQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLM 429 (479)
Q Consensus 350 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~ 429 (479)
++.+++ ||+.+| |.+.||+++|+|+|+.+...+++. +.+ .|.|..++ .++++|++++.++++|++.+++..
T Consensus 272 ~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~-~g~g~lv~-~d~~~la~~i~~ll~d~~~~~~~~ 342 (376)
T 1v4v_A 272 MRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLK-AGILKLAG-TDPEGVYRVVKGLLENPEELSRMR 342 (376)
T ss_dssp HHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHH-HTSEEECC-SCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhc-CCceEECC-CCHHHHHHHHHHHHhChHhhhhhc
Confidence 889888 999884 556799999999999887666665 345 58888775 489999999999999987665544
Q ss_pred H
Q 011687 430 N 430 (479)
Q Consensus 430 ~ 430 (479)
+
T Consensus 343 ~ 343 (376)
T 1v4v_A 343 K 343 (376)
T ss_dssp H
T ss_pred c
Confidence 3
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.42 E-value=2.8e-11 Score=120.09 Aligned_cols=351 Identities=11% Similarity=0.025 Sum_probs=185.4
Q ss_pred CCCCEEEEecC---CC-CCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHH
Q 011687 8 KKKNKILMVPY---PA-QGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAI 83 (479)
Q Consensus 8 ~~~~~i~~~~~---~~-~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~ 83 (479)
.++|||+++.. +. .|.-..+..+++.|.++||+|++++............ ...+ .++.++..- ....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~------~~~~- 88 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV-VSGG-KAVPIPYNG------SVAR- 88 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE-EECC-CCC-----------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc-ccCC-cEEeccccC------Cccc-
Confidence 35799999984 22 5666889999999999999999999864322111100 0011 111111000 0000
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCC
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTG 161 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~ 161 (479)
+.. .......+.+++++. +||+|++.... ..+..++..+++|+|..........
T Consensus 89 ~~~-~~~~~~~l~~~l~~~----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------------- 144 (406)
T 2gek_A 89 LRF-GPATHRKVKKWIAEG----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS------------------- 144 (406)
T ss_dssp --C-CHHHHHHHHHHHHHH----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-------------------
T ss_pred ccc-cHHHHHHHHHHHHhc----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-------------------
Confidence 000 000112344555555 89999987644 2245667778999998532210000
Q ss_pred CCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccCC
Q 011687 162 SPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLCR 241 (479)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~ 241 (479)
..........+ ......+.+++.+....+.-. . .++
T Consensus 145 -------------------------------~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~-------~----~~~ 180 (406)
T 2gek_A 145 -------------------------------LTLSVFQGILR--PYHEKIIGRIAVSDLARRWQM-------E----ALG 180 (406)
T ss_dssp -------------------------------HHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHH-------H----HHS
T ss_pred -------------------------------hhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHH-------H----hcC
Confidence 00000000111 223667778877754433111 1 111
Q ss_pred -CceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC----CCCeEEEE
Q 011687 242 -PKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL----GLPFIWVL 316 (479)
Q Consensus 242 -~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~----~~~~iw~~ 316 (479)
.++ .+..-...... ... .... . ..+...+++..|+ . ....+-+..+++++..+ +.--+..+
T Consensus 181 ~~~~-vi~~~v~~~~~--~~~--~~~~------~-~~~~~~~i~~~G~-~-~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 246 (406)
T 2gek_A 181 SDAV-EIPNGVDVASF--ADA--PLLD------G-YPREGRTVLFLGR-Y-DEPRKGMAVLLAALPKLVARFPDVEILIV 246 (406)
T ss_dssp SCEE-ECCCCBCHHHH--HTC--CCCT------T-CSCSSCEEEEESC-T-TSGGGCHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred CCcE-EecCCCChhhc--CCC--chhh------h-ccCCCeEEEEEee-e-CccccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 234 44421111000 000 0000 0 0112257778888 4 01223344444555443 22233445
Q ss_pred cCCcCCCCChhhHhhhcC-CCCceEEeeeehH---HhhcccCccceEec----cc-hhHHHHHHHhCcceecccCccchh
Q 011687 317 GFAWREGLPDGYLDRVSN-SRQGKVVPWAPQL---KVLQHNAVGFYLTH----CG-WNSTMEAIQSGKRLLCYPVAGDQF 387 (479)
Q Consensus 317 ~~~~~~~l~~~~~~~~~~-~~nv~~~~~~pq~---~lL~~~~~~~~I~H----gG-~~s~~eal~~GvP~l~~P~~~DQ~ 387 (479)
|.+.. +.+.+.+.. .++|.+.+++|+. .++..+++ +|.- .| ..++.||+++|+|+|+.+. .
T Consensus 247 G~~~~----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~ 316 (406)
T 2gek_A 247 GRGDE----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----D 316 (406)
T ss_dssp SCSCH----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----H
T ss_pred cCCcH----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----C
Confidence 54321 222222110 1789999999975 68888898 6643 33 4589999999999999866 4
Q ss_pred hHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhcCCc
Q 011687 388 INCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTRNDH 464 (479)
Q Consensus 388 ~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 464 (479)
.....+.+ -+.|..++.-+.++++++|.+++++++.+++..+-+.+.... -+.+...+.+.+.++.......
T Consensus 317 ~~~e~i~~-~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 317 AFRRVLAD-GDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHR----YDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHTT-TTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGG----GBHHHHHHHHHHHHHHHCCTTC
T ss_pred cHHHHhcC-CCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHhhcc
Confidence 67777777 578888877889999999999998887655443333332222 3455667777777776665443
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.41 E-value=1.3e-12 Score=129.45 Aligned_cols=326 Identities=11% Similarity=0.089 Sum_probs=174.2
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCcccc----ccccCCCCCCCeEE-EeCCCCCCCCCCCCHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPEFIHN----QITSSMDPRSEISC-MSIPDGLEKNEPKDFF 81 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~----~i~~~~~~~~g~~~-~~i~~~l~~~~~~~~~ 81 (479)
+++|||++++ |+.....=+.+|.++|.++ |+++.++.+..-.+ .++. -+++. +.+. +.. ......
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~--~~~-~~~~~~ 93 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN--IME-PGQTLN 93 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC--CCC-TTCCHH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee--cCC-CCCCHH
Confidence 3457887776 7777788889999999987 79987555533211 1122 22210 1111 100 111222
Q ss_pred HHHHHHHHhchHHHHHHHHHhhccCCceEEEeCC--Cc-ccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCC
Q 011687 82 AIEKVIENIMPIHLERLINKINEDGRVACVVVDL--LA-SSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYIS 158 (479)
Q Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p 158 (479)
.. ... ....+.++++++ +||+|++-. .. +++..+|..+|||++.+... .
T Consensus 94 ~~---~~~-~~~~l~~~l~~~----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag------------------~-- 145 (396)
T 3dzc_A 94 GV---TSK-ILLGMQQVLSSE----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG------------------L-- 145 (396)
T ss_dssp HH---HHH-HHHHHHHHHHHH----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC------------------C--
T ss_pred HH---HHH-HHHHHHHHHHhc----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC------------------c--
Confidence 22 122 233366677777 999999732 22 44568899999998764110 0
Q ss_pred CCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccc
Q 011687 159 DTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGAT 238 (479)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 238 (479)
+.+... . .. .....+.. ....++.+++.+-..-+ ++...
T Consensus 146 ---------rs~~~~--------~----------~~---~~~~~r~~-~~~~a~~~~~~se~~~~-------~l~~~--- 184 (396)
T 3dzc_A 146 ---------RTGNIY--------S----------PW---PEEGNRKL-TAALTQYHFAPTDTSRA-------NLLQE--- 184 (396)
T ss_dssp ---------CCSCTT--------S----------ST---THHHHHHH-HHHTCSEEEESSHHHHH-------HHHHT---
T ss_pred ---------cccccc--------c----------CC---cHHHHHHH-HHHhcCEEECCCHHHHH-------HHHHc---
Confidence 000000 0 00 00111111 11445677776643222 11110
Q ss_pred cC-CCceeEec-cccccccccCCCCCccc-------chhhhhhhc-CCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC
Q 011687 239 LC-RPKVLLVG-PLSKHATIAKNPSLWEE-------DKSCIDWLD-NQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL 308 (479)
Q Consensus 239 ~~-~~~v~~vG-pl~~~~~~~~~~~~~~~-------~~~l~~~l~-~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~ 308 (479)
.. +.++..+| |...... ..... ..++.+-+. ...++++|+++.+. ..+.... +..+++|+..+
T Consensus 185 G~~~~ki~vvGn~~~d~~~-----~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR-~~~~~~~-~~~ll~A~~~l 257 (396)
T 3dzc_A 185 NYNAENIFVTGNTVIDALL-----AVREKIHTDMDLQATLESQFPMLDASKKLILVTGHR-RESFGGG-FERICQALITT 257 (396)
T ss_dssp TCCGGGEEECCCHHHHHHH-----HHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSC-BCCCTTH-HHHHHHHHHHH
T ss_pred CCCcCcEEEECCcHHHHHH-----HhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECC-cccchhH-HHHHHHHHHHH
Confidence 12 24688899 4432111 00000 012222232 11345677777633 2222222 56677777654
Q ss_pred -----CCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeeh---HHhhcccCccceEeccchhHHHHHHHhCcceecc
Q 011687 309 -----GLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQ---LKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCY 380 (479)
Q Consensus 309 -----~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq---~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 380 (479)
+.++++.++.+.. +.+.+.+.....+++.+++++++ ..+++.+++ ||+-.| |.+.||.++|+|+|+.
T Consensus 258 ~~~~~~~~~v~~~g~~~~--~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~ 332 (396)
T 3dzc_A 258 AEQHPECQILYPVHLNPN--VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVM 332 (396)
T ss_dssp HHHCTTEEEEEECCBCHH--HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEEC
T ss_pred HHhCCCceEEEEeCCChH--HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEc
Confidence 3445554443210 11112221111268989887754 458888888 999887 6668999999999998
Q ss_pred cCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011687 381 PVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLM 429 (479)
Q Consensus 381 P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~ 429 (479)
....+++. +.+ .|.+..+.. ++++|.+++.++++|++.++++.
T Consensus 333 ~~~~~~~e----~v~-~G~~~lv~~-d~~~l~~ai~~ll~d~~~~~~m~ 375 (396)
T 3dzc_A 333 RETTERPE----AVA-AGTVKLVGT-NQQQICDALSLLLTDPQAYQAMS 375 (396)
T ss_dssp CSSCSCHH----HHH-HTSEEECTT-CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCCcchH----HHH-cCceEEcCC-CHHHHHHHHHHHHcCHHHHHHHh
Confidence 65555532 345 587766643 79999999999999988666444
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.40 E-value=5.2e-12 Score=125.29 Aligned_cols=327 Identities=10% Similarity=0.041 Sum_probs=170.7
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccccc----cccCCCCCCCeEE-EeCCCCCCCCCCCC
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIHNQ----ITSSMDPRSEISC-MSIPDGLEKNEPKD 79 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~----i~~~~~~~~g~~~-~~i~~~l~~~~~~~ 79 (479)
+|++|||+++. |+.....=+.+|.++|.++ |+++.++.+..-.+. ++. -++.. +.+. +.. ....
T Consensus 24 ~m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~-----~~i~~~~~l~--v~~-~~~~ 94 (403)
T 3ot5_A 24 AMAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI-----FDIKPDIDLD--IMK-KGQT 94 (403)
T ss_dssp --CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH-----TTCCCSEECC--CCC--CCC
T ss_pred ccccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh-----cCCCCCcccc--cCC-CCCC
Confidence 35567888777 7777777779999999988 688876655421111 111 12210 1111 100 1112
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCC--C-cccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCC
Q 011687 80 FFAIEKVIENIMPIHLERLINKINEDGRVACVVVDL--L-ASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGY 156 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~--~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (479)
.... ... ....+.++++++ +||+|++-. . .+++..+|..+|||++.+...
T Consensus 95 ~~~~---~~~-~~~~l~~~l~~~----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag------------------- 147 (403)
T 3ot5_A 95 LAEI---TSR-VMNGINEVIAAE----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG------------------- 147 (403)
T ss_dssp HHHH---HHH-HHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC-------------------
T ss_pred HHHH---HHH-HHHHHHHHHHHc----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-------------------
Confidence 2221 122 223366677777 999999632 2 245678899999998764110
Q ss_pred CCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccc
Q 011687 157 ISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKG 236 (479)
Q Consensus 157 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 236 (479)
.+.+..+ ..++ ....+.... ...+.+++.+-..-+ .+...
T Consensus 148 ----------lrs~~~~--------~~~p---------~~~~r~~~~-----~~a~~~~~~se~~~~-------~l~~~- 187 (403)
T 3ot5_A 148 ----------LRTWNKY--------SPFP---------EEMNRQLTG-----VMADIHFSPTKQAKE-------NLLAE- 187 (403)
T ss_dssp ----------CCCSCTT--------SSTT---------HHHHHHHHH-----HHCSEEEESSHHHHH-------HHHHT-
T ss_pred ----------ccccccc--------cCCc---------HHHHHHHHH-----HhcCEEECCCHHHHH-------HHHHc-
Confidence 0000000 0000 011111111 234556666533222 11110
Q ss_pred cccC-CCceeEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC-----CC
Q 011687 237 ATLC-RPKVLLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL-----GL 310 (479)
Q Consensus 237 ~~~~-~~~v~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~-----~~ 310 (479)
.. +.+++.+|....+........ ....+.+.+ + .+++.++++.|. ...... .+..+++|+..+ +.
T Consensus 188 --Gi~~~~i~vvGn~~~D~~~~~~~~-~~~~~~~~~-l---~~~~~vlv~~~r-~~~~~~-~l~~ll~a~~~l~~~~~~~ 258 (403)
T 3ot5_A 188 --GKDPATIFVTGNTAIDALKTTVQK-DYHHPILEN-L---GDNRLILMTAHR-RENLGE-PMQGMFEAVREIVESREDT 258 (403)
T ss_dssp --TCCGGGEEECCCHHHHHHHHHSCT-TCCCHHHHS-C---TTCEEEEECCCC-HHHHTT-HHHHHHHHHHHHHHHCTTE
T ss_pred --CCCcccEEEeCCchHHHHHhhhhh-hcchHHHHh-c---cCCCEEEEEeCc-ccccCc-HHHHHHHHHHHHHHhCCCc
Confidence 12 246888984322211000000 001111222 2 345677777664 222221 245566666542 34
Q ss_pred CeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeeh---HHhhcccCccceEeccchhHHHHHHHhCcceecccCccchh
Q 011687 311 PFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQ---LKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQF 387 (479)
Q Consensus 311 ~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq---~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 387 (479)
++++..+++.. +-+.+.+.....+++.+++++++ ..+++.+++ +|+-.|.. +.||.++|+|+|++|...+++
T Consensus 259 ~~v~~~~~~~~--~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 259 ELVYPMHLNPA--VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERP 333 (403)
T ss_dssp EEEEECCSCHH--HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCH
T ss_pred eEEEecCCCHH--HHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcch
Confidence 55554443210 11111111211268999998864 458888888 99887533 379999999999997666665
Q ss_pred hHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHH
Q 011687 388 INCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLM 429 (479)
Q Consensus 388 ~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~ 429 (479)
. +.+ .|.|..+.. ++++|.+++.++++|++.++++.
T Consensus 334 e----~v~-~g~~~lv~~-d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 334 E----GIE-AGTLKLIGT-NKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp H----HHH-HTSEEECCS-CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred h----hee-CCcEEEcCC-CHHHHHHHHHHHHcCHHHHHHHH
Confidence 4 245 588877754 89999999999999988766543
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.40 E-value=1.6e-11 Score=121.11 Aligned_cols=138 Identities=13% Similarity=0.141 Sum_probs=89.4
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhC-----CCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeeh---HHh
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEAL-----GLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQ---LKV 349 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~-----~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq---~~l 349 (479)
+++.|+++.|+ ..... +-+..+++|+..+ +.++++..+.+. ...+.+.+.....++|.+.+++++ .++
T Consensus 204 ~~~~vl~~~gr-~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~ 279 (384)
T 1vgv_A 204 DKKMILVTGHR-RESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWL 279 (384)
T ss_dssp TSEEEEEECCC-BSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCC-ccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHH
Confidence 45678888887 44322 3355566666543 334444333221 011122211111268888777765 557
Q ss_pred hcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHH
Q 011687 350 LQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRL 428 (479)
Q Consensus 350 L~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a 428 (479)
++.+++ ||+.+| +++.||+++|+|+|+.+...+.+. +.+ .|.|..++. +.++|+++|.++++|++.+++.
T Consensus 280 ~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~~-d~~~la~~i~~ll~d~~~~~~~ 349 (384)
T 1vgv_A 280 MNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVGT-DKQRIVEEVTRLLKDENEYQAM 349 (384)
T ss_dssp HHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEECS-SHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeCC-CHHHHHHHHHHHHhChHHHhhh
Confidence 889998 999885 448899999999999987444332 345 588988866 8999999999999988765543
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.38 E-value=1e-10 Score=117.19 Aligned_cols=388 Identities=13% Similarity=0.047 Sum_probs=191.3
Q ss_pred CCCEEEEecCC-----CCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccc---------------cCCCCCCCeEEEeC
Q 011687 9 KKNKILMVPYP-----AQGHVTPMHKLASILTSRGFEPIVITPEFIHNQIT---------------SSMDPRSEISCMSI 68 (479)
Q Consensus 9 ~~~~i~~~~~~-----~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~---------------~~~~~~~g~~~~~i 68 (479)
++|||++++.. ..|--.-+..|++.|+++||+|+++++......-. -......|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46999999832 34666678899999999999999999643111000 00001156777766
Q ss_pred CCCCCC-CCCCC-HHHH-HHHHHHhchHHHHHHHHHh-hccCCceEEEeCCCc--ccHHHHHHHhCCCcEeEcchhHHHH
Q 011687 69 PDGLEK-NEPKD-FFAI-EKVIENIMPIHLERLINKI-NEDGRVACVVVDLLA--SSAIGVACRCGVPAAGFWPAMLATY 142 (479)
Q Consensus 69 ~~~l~~-~~~~~-~~~~-~~~~~~~~~~~l~~~l~~l-~~~~~~D~vi~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~ 142 (479)
+..... ..... .... ...+.. ....+..+++.+ ....+||+|.+.... ..+..++...++|+|..........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~ 159 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSK 159 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCCC
T ss_pred cchhccccccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccccc
Confidence 641111 11111 1211 222222 122233344443 223499999987643 2356677889999988633211000
Q ss_pred HHHhhhhhhhhcCCCCCCCCCCccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhh
Q 011687 143 CLIDAIPEMIKSGYISDTGSPQHLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEE 222 (479)
Q Consensus 143 ~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l 222 (479)
.+.. ...... + ...... .... .... ....++.+++.|....
T Consensus 160 -----~~~~------------------~~~~~~---~--~~~~~~-----~~~~----~~~~--~~~~ad~ii~~S~~~~ 200 (439)
T 3fro_A 160 -----LPAF------------------YFHEAG---L--SELAPY-----PDID----PEHT--GGYIADIVTTVSRGYL 200 (439)
T ss_dssp -----EEHH------------------HHHHTT---C--GGGCCS-----SEEC----HHHH--HHHHCSEEEESCHHHH
T ss_pred -----CchH------------------HhCccc---c--cccccc-----ceee----Hhhh--hhhhccEEEecCHHHH
Confidence 0000 000000 0 000000 0000 1111 1245667777775443
Q ss_pred hhhhhhhhhhcccccccCCCceeEecc-ccccccccCCCC--CcccchhhhhhhcCCCCCcEEEEEeCCccc--cCCHHH
Q 011687 223 YMDDIKQQYHHSKGATLCRPKVLLVGP-LSKHATIAKNPS--LWEEDKSCIDWLDNQKPNSVIYISFGSWVS--PIGEEK 297 (479)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~v~~vGp-l~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~--~~~~~~ 297 (479)
+.... .+.. ...++..+.. +-.......... .......+.+-+.. +++ .+++..|+ .. ....+.
T Consensus 201 ~~~~~---~~~~-----~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~-~~~~~Kg~~~ 269 (439)
T 3fro_A 201 IDEWG---FFRN-----FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGR-FDRGQKGVDV 269 (439)
T ss_dssp HHTHH---HHGG-----GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECC-SSCTTBCHHH
T ss_pred HHHhh---hhhh-----cCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcc-cccccccHHH
Confidence 32111 1100 1345555542 211110000000 00011122233332 334 78888998 43 334444
Q ss_pred HHHHHHHHHhCC--CCe-EEEEcCCcCC--CCChhhHhhhcCCCCceEEeeeehHH---hhcccCccceEec----cchh
Q 011687 298 VKTLALTLEALG--LPF-IWVLGFAWRE--GLPDGYLDRVSNSRQGKVVPWAPQLK---VLQHNAVGFYLTH----CGWN 365 (479)
Q Consensus 298 ~~~l~~al~~~~--~~~-iw~~~~~~~~--~l~~~~~~~~~~~~nv~~~~~~pq~~---lL~~~~~~~~I~H----gG~~ 365 (479)
+-..+..+.+.. ..+ +..+|.+... ..-..+.++.+ +++.+.+|+|+.+ ++..+++ +|.- |-..
T Consensus 270 li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~ 345 (439)
T 3fro_A 270 LLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGL 345 (439)
T ss_dssp HHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCH
T ss_pred HHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccH
Confidence 444444443321 233 3344432110 00011122222 3444558899865 6788888 6633 3358
Q ss_pred HHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHcccccCCCc
Q 011687 366 STMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKE-DSEMKHRLMNLYMRTMGDDGARAR 444 (479)
Q Consensus 366 s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~-~~~~~~~a~~l~~~~~~~~~~g~~ 444 (479)
++.||+++|+|+|+.... .....+++ |.|..++.-+.++++++|.++++ +++.+++..+-+.+..+. -+
T Consensus 346 ~~~EAma~G~Pvi~s~~~----~~~e~~~~--~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~----~s 415 (439)
T 3fro_A 346 VALEAMCLGAIPIASAVG----GLRDIITN--ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS----FS 415 (439)
T ss_dssp HHHHHHHTTCEEEEESST----HHHHHCCT--TTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT----SC
T ss_pred HHHHHHHCCCCeEEcCCC----CcceeEEc--CceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh----Cc
Confidence 999999999999997543 55555555 68888888899999999999997 655433333322222221 23
Q ss_pred hhHHHHHHHHHHHhhhc
Q 011687 445 VMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 445 ~~~~~~~~~~~~~~~~~ 461 (479)
.....+++.+.++....
T Consensus 416 ~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 416 WEKSAERYVKAYTGSID 432 (439)
T ss_dssp HHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55667777776666544
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.34 E-value=5.9e-11 Score=116.36 Aligned_cols=142 Identities=16% Similarity=0.204 Sum_probs=96.8
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCC----C-eEEEEcCCcCCCCChhhHh---hhcCCCCceEEeeeeh-HH
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGL----P-FIWVLGFAWREGLPDGYLD---RVSNSRQGKVVPWAPQ-LK 348 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~----~-~iw~~~~~~~~~l~~~~~~---~~~~~~nv~~~~~~pq-~~ 348 (479)
++..+++..|+ .. +.+-+..+++|+..+.. . -++.+|.+. .+.+.+ +....++|.+.++..+ ..
T Consensus 194 ~~~~~i~~~G~-~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 266 (374)
T 2iw1_A 194 EQQNLLLQVGS-DF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK----PRKFEALAEKLGVRSNVHFFSGRNDVSE 266 (374)
T ss_dssp TTCEEEEEECS-CT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----CHHHHHHHHHHTCGGGEEEESCCSCHHH
T ss_pred CCCeEEEEecc-ch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC----HHHHHHHHHHcCCCCcEEECCCcccHHH
Confidence 34467788888 33 33455667777776532 2 344555432 122222 2211268888887554 56
Q ss_pred hhcccCccceEe----ccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeC-CCCHHHHHHHHHHHhcCHH
Q 011687 349 VLQHNAVGFYLT----HCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVN-GFGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 349 lL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~-~~~~~~i~~~i~~vl~~~~ 423 (479)
+++.+++ +|. -|..+++.||+++|+|+|+.+.. .++..+++ -+.|..++ ..+.++++++|.++++|++
T Consensus 267 ~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~~~~~~~l~~~i~~l~~~~~ 339 (374)
T 2iw1_A 267 LMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIAD-ANCGTVIAEPFSQEQLNEVLRKALTQSP 339 (374)
T ss_dssp HHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHH-HTCEEEECSSCCHHHHHHHHHHHHHCHH
T ss_pred HHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhhcc-CCceEEeCCCCCHHHHHHHHHHHHcChH
Confidence 8888888 775 46678999999999999997764 56677888 68999997 5799999999999998877
Q ss_pred HHHHHHHHHH
Q 011687 424 MKHRLMNLYM 433 (479)
Q Consensus 424 ~~~~a~~l~~ 433 (479)
.+++..+-+.
T Consensus 340 ~~~~~~~~~~ 349 (374)
T 2iw1_A 340 LRMAWAENAR 349 (374)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6554444333
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.33 E-value=6.1e-11 Score=114.98 Aligned_cols=155 Identities=15% Similarity=0.102 Sum_probs=100.8
Q ss_pred EEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehH---HhhcccCccce
Q 011687 282 IYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQL---KVLQHNAVGFY 358 (479)
Q Consensus 282 Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~ 358 (479)
+++..|+ .. +.+-+..+++|++.++.+++ .+|.+.....-+.+.++.. ++|.+.+|+|+. .++..+++ +
T Consensus 164 ~i~~vG~-~~--~~Kg~~~li~a~~~~~~~l~-i~G~g~~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv--~ 235 (342)
T 2iuy_A 164 FLLFMGR-VS--PHKGALEAAAFAHACGRRLV-LAGPAWEPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHA--V 235 (342)
T ss_dssp CEEEESC-CC--GGGTHHHHHHHHHHHTCCEE-EESCCCCHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSE--E
T ss_pred EEEEEec-cc--cccCHHHHHHHHHhcCcEEE-EEeCcccHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCE--E
Confidence 4556787 33 34556677777777766654 4453321100012233344 789999999976 68888888 6
Q ss_pred Ee--c------------cchhHHHHHHHhCcceecccCccchhhHHHHHHH--HhcceeeeCCCCHHHHHHHHHHHhcCH
Q 011687 359 LT--H------------CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVK--MWKIGIRVNGFGKRDIEDGLKKLKEDS 422 (479)
Q Consensus 359 I~--H------------gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~--~~Gvg~~~~~~~~~~i~~~i~~vl~~~ 422 (479)
|. . |-.+++.||+++|+|+|+.... .+...+++ + +.|..++. +.++++++|.++++
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~~-d~~~l~~~i~~l~~-- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTDF-APDEARRTLAGLPA-- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSCC-CHHHHHHHHHTSCC--
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcCC-CHHHHHHHHHHHHH--
Confidence 63 2 3347899999999999998764 45565655 3 57777777 99999999999996
Q ss_pred HHHHHHHHHH-HHHcccccCCCchhHHHHHHHHHHHhhhcC
Q 011687 423 EMKHRLMNLY-MRTMGDDGARARVMNNLTGFVDDLSKLTRN 462 (479)
Q Consensus 423 ~~~~~a~~l~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 462 (479)
.+++++.. +.+. .....+++.+.++.....
T Consensus 308 --~~~~~~~~~~~~s--------~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 308 --SDEVRRAAVRLWG--------HVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp --HHHHHHHHHHHHB--------HHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHhcC--------HHHHHHHHHHHHHHHHcc
Confidence 55555544 3333 335566666666655443
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.33 E-value=3.6e-10 Score=115.51 Aligned_cols=167 Identities=13% Similarity=0.038 Sum_probs=102.8
Q ss_pred EEEEEeCCccccCCHHHHHHHHHHHHhCC----CC-eEEEEcCCcCC-----CC-------ChhhH---hhhcCCCCceE
Q 011687 281 VIYISFGSWVSPIGEEKVKTLALTLEALG----LP-FIWVLGFAWRE-----GL-------PDGYL---DRVSNSRQGKV 340 (479)
Q Consensus 281 ~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~----~~-~iw~~~~~~~~-----~l-------~~~~~---~~~~~~~nv~~ 340 (479)
.+++..|+ .. +..-+..+++|+..+. .. .++.+|..... .+ .+.+. ++....++|.+
T Consensus 263 ~~i~~vGr-l~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 263 PAIIASSR-LD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp CEEEECSC-CC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred cEEEEeec-Cc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 56778888 32 3344566677776652 12 35556541110 01 11121 11111278999
Q ss_pred EeeeehHH---hhccc----CccceEec----cchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHH
Q 011687 341 VPWAPQLK---VLQHN----AVGFYLTH----CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKR 409 (479)
Q Consensus 341 ~~~~pq~~---lL~~~----~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~ 409 (479)
.+++|+.+ +++.+ ++ ||.- |-..++.||+++|+|+|+.... .....+.+ -..|..++.-+.+
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~-~~~g~l~~~~d~~ 412 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDG-GKYGVLVDPEDPE 412 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGG-GTSSEEECTTCHH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcC-CceEEEeCCCCHH
Confidence 99998654 77788 88 7642 3347899999999999998653 56666777 4688888878999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH-HcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 410 DIEDGLKKLKEDSEMKHRLMNLYMR-TMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 410 ~i~~~i~~vl~~~~~~~~a~~l~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
+++++|.++++|++.+++..+-+.+ +.+. -+.....+++.+.++....
T Consensus 413 ~la~~i~~ll~~~~~~~~~~~~a~~~~~~~----fs~~~~~~~~~~~y~~~~~ 461 (499)
T 2r60_A 413 DIARGLLKAFESEETWSAYQEKGKQRVEER----YTWQETARGYLEVIQEIAD 461 (499)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHH----SBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHh
Confidence 9999999999887755443322221 1110 2244556666666665554
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.32 E-value=8.2e-11 Score=115.49 Aligned_cols=139 Identities=13% Similarity=0.080 Sum_probs=86.7
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhC---CCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehH---Hhhc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEAL---GLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQL---KVLQ 351 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~---~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~---~lL~ 351 (479)
++++++++.|+ ..... +.+..+++|+..+ ...+.++++.+....+.+.+.+.....++|.+.+++++. .+++
T Consensus 204 ~~~~vl~~~gr-~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (375)
T 3beo_A 204 NNRLVLMTAHR-RENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAA 281 (375)
T ss_dssp TSEEEEEECCC-GGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCeEEEEecc-cccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHH
Confidence 45577778887 43222 3456677777543 112333343221100111111111112688887777654 5788
Q ss_pred ccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHH
Q 011687 352 HNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHR 427 (479)
Q Consensus 352 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~ 427 (479)
.+++ ||+..| +.+.||+++|+|+|+.......+ . +.+ .|.|..++. +.++|+++|.++++|++.+++
T Consensus 282 ~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e-~v~-~g~g~~v~~-d~~~la~~i~~ll~~~~~~~~ 348 (375)
T 3beo_A 282 RSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---E-GIE-AGTLKLAGT-DEETIFSLADELLSDKEAHDK 348 (375)
T ss_dssp TCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---H-HHH-TTSEEECCS-CHHHHHHHHHHHHHCHHHHHH
T ss_pred hCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---e-eec-CCceEEcCC-CHHHHHHHHHHHHhChHhHhh
Confidence 8888 998864 55899999999999986533332 2 345 578888865 899999999999998876554
No 37
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.30 E-value=1.8e-09 Score=106.78 Aligned_cols=353 Identities=11% Similarity=0.012 Sum_probs=181.2
Q ss_pred CEEEEecCCC-CCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 011687 11 NKILMVPYPA-QGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIEN 89 (479)
Q Consensus 11 ~~i~~~~~~~-~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~ 89 (479)
.++....+|. .|.-.-+..+++.|+++||+|++++...... .. ....++.+..++............ .+.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~---~~~~~i~~~~~~~~~~~~~~~~~~-~~~---- 86 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN---KVYPNIYFHEVTVNQYSVFQYPPY-DLA---- 86 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC--------CCCTTEEEECCCCC----CCSCCH-HHH----
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc---ccCCceEEEecccccccccccccc-cHH----
Confidence 4666666665 4667788899999999999999999853211 11 112567776655211100000001 111
Q ss_pred hchHHHHHHHHHhhccCCceEEEeCCCccc--HHHHHH-Hh--CCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCCCC
Q 011687 90 IMPIHLERLINKINEDGRVACVVVDLLASS--AIGVAC-RC--GVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGSPQ 164 (479)
Q Consensus 90 ~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~--~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 164 (479)
....+.+++++. +||+|++...... ...++. .+ ++|+|......... .
T Consensus 87 -~~~~l~~~l~~~----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--------------~-------- 139 (394)
T 2jjm_A 87 -LASKMAEVAQRE----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--------------V-------- 139 (394)
T ss_dssp -HHHHHHHHHHHH----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--------------T--------
T ss_pred -HHHHHHHHHHHc----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--------------c--------
Confidence 112244455555 9999998753322 223333 33 59988754331100 0
Q ss_pred ccccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccCCCce
Q 011687 165 HLESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLCRPKV 244 (479)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~v 244 (479)
. + .. . .+....+.. ...++.+++.|....+.-.. ... ...++
T Consensus 140 --------~-~-----~~---------~----~~~~~~~~~--~~~ad~ii~~s~~~~~~~~~---~~~------~~~~~ 181 (394)
T 2jjm_A 140 --------L-G-----SD---------P----SLNNLIRFG--IEQSDVVTAVSHSLINETHE---LVK------PNKDI 181 (394)
T ss_dssp --------T-T-----TC---------T----TTHHHHHHH--HHHSSEEEESCHHHHHHHHH---HTC------CSSCE
T ss_pred --------c-C-----CC---------H----HHHHHHHHH--HhhCCEEEECCHHHHHHHHH---hhC------CcccE
Confidence 0 0 00 0 001111111 24567788777554332111 000 02355
Q ss_pred eEeccccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhC----CCCeEEEEcCCc
Q 011687 245 LLVGPLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEAL----GLPFIWVLGFAW 320 (479)
Q Consensus 245 ~~vGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~----~~~~iw~~~~~~ 320 (479)
..+..-..... ........+.+-+.. +++..+++..|+ .. ...-+..+++|++.+ +. -++.+|.+.
T Consensus 182 ~vi~ngv~~~~-----~~~~~~~~~~~~~~~-~~~~~~i~~~G~-~~--~~Kg~~~li~a~~~l~~~~~~-~l~i~G~g~ 251 (394)
T 2jjm_A 182 QTVYNFIDERV-----YFKRDMTQLKKEYGI-SESEKILIHISN-FR--KVKRVQDVVQAFAKIVTEVDA-KLLLVGDGP 251 (394)
T ss_dssp EECCCCCCTTT-----CCCCCCHHHHHHTTC-C---CEEEEECC-CC--GGGTHHHHHHHHHHHHHSSCC-EEEEECCCT
T ss_pred EEecCCccHHh-----cCCcchHHHHHHcCC-CCCCeEEEEeec-cc--cccCHHHHHHHHHHHHhhCCC-EEEEECCch
Confidence 55553222111 000111122222321 133456677888 43 223344444554432 33 344455332
Q ss_pred CCCCChhhHhhhc---CCCCceEEeeeeh-HHhhcccCccceE----eccchhHHHHHHHhCcceecccCccchhhHHHH
Q 011687 321 REGLPDGYLDRVS---NSRQGKVVPWAPQ-LKVLQHNAVGFYL----THCGWNSTMEAIQSGKRLLCYPVAGDQFINCAY 392 (479)
Q Consensus 321 ~~~l~~~~~~~~~---~~~nv~~~~~~pq-~~lL~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~r 392 (479)
. .+.+.+.+. ..++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....
T Consensus 252 ~---~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~ 322 (394)
T 2jjm_A 252 E---FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEV 322 (394)
T ss_dssp T---HHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTT
T ss_pred H---HHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHH
Confidence 1 122221111 1167888876543 568888888 77 456678999999999999998764 33444
Q ss_pred HHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHc-ccccCCCchhHHHHHHHHHHHhhhc
Q 011687 393 IVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRLMNLYMRTM-GDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 393 v~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
+++ -+.|..++.-+.++++++|.++++|++.+++..+-+.+.. +. -+.+...+.+.+.++....
T Consensus 323 v~~-~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 323 IQH-GDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQ----FRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp CCB-TTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHTC-
T ss_pred hhc-CCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHh
Confidence 555 4678888778899999999999988775544333222221 21 2345666666666665543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.15 E-value=1.8e-08 Score=100.23 Aligned_cols=85 Identities=18% Similarity=0.031 Sum_probs=66.7
Q ss_pred CCceEEeeee---h---HHhhcccCccceEecc----chhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCC
Q 011687 336 RQGKVVPWAP---Q---LKVLQHNAVGFYLTHC----GWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG 405 (479)
Q Consensus 336 ~nv~~~~~~p---q---~~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~ 405 (479)
++|.+.+|++ + ..+++.+++ +|.-. ...++.||+++|+|+|+.+. ..+...+++ -+.|..++
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC-
Confidence 7899998876 2 447888888 77544 45789999999999999765 366777777 57888886
Q ss_pred CCHHHHHHHHHHHhcCHHHHHHHH
Q 011687 406 FGKRDIEDGLKKLKEDSEMKHRLM 429 (479)
Q Consensus 406 ~~~~~i~~~i~~vl~~~~~~~~a~ 429 (479)
+.++++++|.++++|++.+++..
T Consensus 365 -d~~~la~~i~~ll~~~~~~~~~~ 387 (416)
T 2x6q_A 365 -DANEAVEVVLYLLKHPEVSKEMG 387 (416)
T ss_dssp -SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHH
Confidence 89999999999998887655433
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.01 E-value=2.6e-09 Score=104.94 Aligned_cols=320 Identities=12% Similarity=0.014 Sum_probs=169.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccc-ccccCCCCCCCeEEEeCCC-CCCCCCCCCHHHHHHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHN-QITSSMDPRSEISCMSIPD-GLEKNEPKDFFAIEKVIE 88 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~-~i~~~~~~~~g~~~~~i~~-~l~~~~~~~~~~~~~~~~ 88 (479)
.|++++ .|++-.+.-+.+|.++|.++ +++.++.+..-.+ .+.+.. ..++.. +-|+ .+..+ .......+.
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~--~~~~~i-~~~~~~l~~~-~~~~~~~~~--- 80 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF--FDDMGI-RKPDYFLEVA-ADNTAKSIG--- 80 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH--HC-CCC-CCCSEECCCC-CCCSHHHHH---
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH--HhhCCC-CCCceecCCC-CCCHHHHHH---
Confidence 455554 58888899999999999887 8877777653222 221100 012221 0111 01111 112222222
Q ss_pred HhchHHHHHHHHHhhccCCceEEEeCC--CcccHHHHHHHhCCCcEeEcchhHHHHHHHhhhhhhhhcCCCCCCCCCCcc
Q 011687 89 NIMPIHLERLINKINEDGRVACVVVDL--LASSAIGVACRCGVPAAGFWPAMLATYCLIDAIPEMIKSGYISDTGSPQHL 166 (479)
Q Consensus 89 ~~~~~~l~~~l~~l~~~~~~D~vi~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~ 166 (479)
. +...+.+++++. +||+|++-. ....+..+|..+|||++.+...
T Consensus 81 ~-~~~~l~~~l~~~----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag----------------------------- 126 (385)
T 4hwg_A 81 L-VIEKVDEVLEKE----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG----------------------------- 126 (385)
T ss_dssp H-HHHHHHHHHHHH----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-----------------------------
T ss_pred H-HHHHHHHHHHhc----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-----------------------------
Confidence 1 233366677777 999999632 3333378999999997764110
Q ss_pred ccccccCCCCCCCCCCCCCcccCCCccchhHHHHHHHHHhhhcCCceEEEcCchhhhhhhhhhhhhcccccccC-CCcee
Q 011687 167 ESTARFLPNQPMLSTEDLPWLIGTPAARKSRFKFWSRTLERSRNLKWLLVNSFPEEYMDDIKQQYHHSKGATLC-RPKVL 245 (479)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~-~~~v~ 245 (479)
. +..+.. ......+.... .-++.+++.+-..-+. ..+. .. +.+++
T Consensus 127 l------------rs~~~~-------~pee~nR~~~~-----~~a~~~~~~te~~~~~------l~~~----G~~~~~I~ 172 (385)
T 4hwg_A 127 N------------RCFDQR-------VPEEINRKIID-----HISDVNITLTEHARRY------LIAE----GLPAELTF 172 (385)
T ss_dssp C------------CCSCTT-------STHHHHHHHHH-----HHCSEEEESSHHHHHH------HHHT----TCCGGGEE
T ss_pred C------------cccccc-------CcHHHHHHHHH-----hhhceeecCCHHHHHH------HHHc----CCCcCcEE
Confidence 0 000000 00001111111 2345566655332221 1111 12 24688
Q ss_pred Eec-cccccccccCCCCCcccchhhhhhhcCCCCCcEEEEEeCCccccCC-HHHHHHHHHHHHhC----CCCeEEEEcCC
Q 011687 246 LVG-PLSKHATIAKNPSLWEEDKSCIDWLDNQKPNSVIYISFGSWVSPIG-EEKVKTLALTLEAL----GLPFIWVLGFA 319 (479)
Q Consensus 246 ~vG-pl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Vyvs~Gs~~~~~~-~~~~~~l~~al~~~----~~~~iw~~~~~ 319 (479)
.+| |....... .......+++.+-++. ++++.|+++.|+ ..+.. .+.+..+++|+.++ +..+++...+.
T Consensus 173 vtGnp~~D~~~~---~~~~~~~~~~~~~lgl-~~~~~iLvt~hr-~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~ 247 (385)
T 4hwg_A 173 KSGSHMPEVLDR---FMPKILKSDILDKLSL-TPKQYFLISSHR-EENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR 247 (385)
T ss_dssp ECCCSHHHHHHH---HHHHHHHCCHHHHTTC-CTTSEEEEEECC-C-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH
T ss_pred EECCchHHHHHH---hhhhcchhHHHHHcCC-CcCCEEEEEeCC-chhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH
Confidence 899 43321100 0000011122233332 235688888887 43332 24566777777654 56676665422
Q ss_pred cCCCCChhhHhh---hcCCCCceEEeeeeh---HHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHH
Q 011687 320 WREGLPDGYLDR---VSNSRQGKVVPWAPQ---LKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYI 393 (479)
Q Consensus 320 ~~~~l~~~~~~~---~~~~~nv~~~~~~pq---~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv 393 (479)
. .+.+.+. ....+|+.+++.+++ ..+++++++ +|+-.|. .+.||.+.|+|+|+++...+-+. .
T Consensus 248 ~----~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~ 316 (385)
T 4hwg_A 248 T----KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----G 316 (385)
T ss_dssp H----HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----H
T ss_pred H----HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----h
Confidence 1 0111111 110157888766654 468889888 9998775 46999999999999987655232 2
Q ss_pred HHHhcceeeeCCCCHHHHHHHHHHHhcCHHHH
Q 011687 394 VKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMK 425 (479)
Q Consensus 394 ~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~ 425 (479)
.+ .|.++.+. .++++|.+++.++++|+..+
T Consensus 317 v~-~G~~~lv~-~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 317 MD-AGTLIMSG-FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp HH-HTCCEECC-SSHHHHHHHHHHHHTTCBTT
T ss_pred hh-cCceEEcC-CCHHHHHHHHHHHHhChHHH
Confidence 45 58776664 48999999999999776543
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.95 E-value=8.9e-08 Score=97.26 Aligned_cols=163 Identities=9% Similarity=0.099 Sum_probs=98.5
Q ss_pred EEEEEeCCccccCCHHHHHHHHHHHHhC---CCCeEEEEcCCcCCCCCh---hhHhhhcCCCCce-EEeeeeh--HHhhc
Q 011687 281 VIYISFGSWVSPIGEEKVKTLALTLEAL---GLPFIWVLGFAWREGLPD---GYLDRVSNSRQGK-VVPWAPQ--LKVLQ 351 (479)
Q Consensus 281 ~Vyvs~Gs~~~~~~~~~~~~l~~al~~~---~~~~iw~~~~~~~~~l~~---~~~~~~~~~~nv~-~~~~~pq--~~lL~ 351 (479)
.+++..|+ .. +.+-+..+++|+..+ +.+++ .+|.+.. ...+ .+.++.+ ++|. +.++... ..+++
T Consensus 292 ~~i~~vGr-l~--~~Kg~~~li~a~~~l~~~~~~l~-ivG~g~~-~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISR-LT--WQKGIDLMAEAVDEIVSLGGRLV-VLGAGDV-ALEGALLAAASRHH--GRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp CEEEEESC-BS--TTTTHHHHHTTHHHHHHTTCEEE-EEECBCH-HHHHHHHHHHHHTT--TTEEEEESCCHHHHHHHHH
T ss_pred eEEEEEcc-Cc--cccCHHHHHHHHHHHHhcCceEE-EEeCCch-HHHHHHHHHHHhCC--CcEEEecCCCHHHHHHHHh
Confidence 47788888 43 223334444444433 44443 4443310 0011 1222233 6887 5677332 25788
Q ss_pred ccCccceEec----cchhHHHHHHHhCcceecccCccchhhHHHHHHHHh---------cceeeeCCCCHHHHHHHHHHH
Q 011687 352 HNAVGFYLTH----CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMW---------KIGIRVNGFGKRDIEDGLKKL 418 (479)
Q Consensus 352 ~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~---------Gvg~~~~~~~~~~i~~~i~~v 418 (479)
.+++ ||.- |...++.||+++|+|+|+.... .....+.+ - +.|..++.-+.++++++|.++
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~~d~~~la~~i~~l 437 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAATGVQFSPVTLDGLKQAIRRT 437 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEESSCSHHHHHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCcceEeCCCCHHHHHHHHHHH
Confidence 8888 7732 3457899999999999997653 55565665 3 578888778899999999999
Q ss_pred h---cCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhcCC
Q 011687 419 K---EDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTRND 463 (479)
Q Consensus 419 l---~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 463 (479)
+ +|++.+++..+-+.+ + .-+.+...+++.+.++.....+
T Consensus 438 l~~~~~~~~~~~~~~~~~~--~----~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 438 VRYYHDPKLWTQMQKLGMK--S----DVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHHHTCHHHHHHHHHHHHT--C----CCBHHHHHHHHHHHHHHHTC--
T ss_pred HHHhCCHHHHHHHHHHHHH--H----hCChHHHHHHHHHHHHHhhCCC
Confidence 9 787766554433321 1 2445566677777676665433
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.90 E-value=1.5e-07 Score=95.65 Aligned_cols=163 Identities=9% Similarity=0.049 Sum_probs=97.8
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhC---CCCeEEEEcCCcCCCCChh---hHhhhcCCCCce-EEeeeeh--HHh
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEAL---GLPFIWVLGFAWREGLPDG---YLDRVSNSRQGK-VVPWAPQ--LKV 349 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~---~~~~iw~~~~~~~~~l~~~---~~~~~~~~~nv~-~~~~~pq--~~l 349 (479)
+..+++..|+ .. +.+-+..+++|+..+ +.+++ .+|.+.. ...+. +.++.. ++|. +.++... ..+
T Consensus 291 ~~~~i~~vGr-l~--~~Kg~~~li~a~~~l~~~~~~l~-ivG~g~~-~~~~~l~~~~~~~~--~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 291 KVPLFAVVSR-LT--SQKGLDLVLEALPGLLEQGGQLA-LLGAGDP-VLQEGFLAAAAEYP--GQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp TSCEEEEEEE-ES--GGGCHHHHHHHHHHHHHTTCEEE-EEEEECH-HHHHHHHHHHHHST--TTEEEEESCCHHHHHHH
T ss_pred CCeEEEEecc-Cc--cccCHHHHHHHHHHHhhCCcEEE-EEeCCch-HHHHHHHHHHHhCC--CcEEEeCCCCHHHHHHH
Confidence 3466777787 33 233344455555443 44443 3443210 00111 222223 6785 5677333 357
Q ss_pred hcccCccceEec----cchhHHHHHHHhCcceecccCccchhhHHHHHHHHh---------cceeeeCCCCHHHHHHHHH
Q 011687 350 LQHNAVGFYLTH----CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMW---------KIGIRVNGFGKRDIEDGLK 416 (479)
Q Consensus 350 L~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~---------Gvg~~~~~~~~~~i~~~i~ 416 (479)
++.+++ ||.- |...++.||+++|+|+|+.... .....+.+ - +.|..++.-+.++++++|.
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~~d~~~la~~i~ 436 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVASGFVFEDSNAWSLLRAIR 436 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEECSSSHHHHHHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-CccccccccccceEEECCCCHHHHHHHHH
Confidence 888888 6632 3357889999999999998653 55555655 3 5788888789999999999
Q ss_pred HHh---cCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 417 KLK---EDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 417 ~vl---~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
+++ +|++.+++..+-+.+ + .-+....++++.+.++....
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~--~----~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMA--M----DFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHH--C----CCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHHHHh--h----cCCHHHHHHHHHHHHHHhhh
Confidence 999 688766554433322 1 13455666666666665543
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.84 E-value=2.8e-07 Score=91.46 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=76.3
Q ss_pred ceEEeeeehHH---hhcccCccceEe----ccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcc-----------
Q 011687 338 GKVVPWAPQLK---VLQHNAVGFYLT----HCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKI----------- 399 (479)
Q Consensus 338 v~~~~~~pq~~---lL~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gv----------- 399 (479)
+.+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+.... .....+.++ ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-ccccccccccccc
Confidence 55559998544 7788888 663 23356899999999999986543 555555552 22
Q ss_pred ----ee--eeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhc
Q 011687 400 ----GI--RVNGFGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTR 461 (479)
Q Consensus 400 ----g~--~~~~~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 461 (479)
|. .+..-+.++++++| ++++|++.+++..+-+.+.... .-+.+...+++.+.++....
T Consensus 329 ~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~---~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 329 DDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKT---KPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp TTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTT---SCCHHHHHHHHHHHHHHHTC
T ss_pred ccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHh
Confidence 55 66557999999999 9999988765554443333211 13466677777777776654
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.79 E-value=1.9e-07 Score=99.52 Aligned_cols=141 Identities=12% Similarity=0.092 Sum_probs=85.9
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCC-----CCeEEEEcCCcCC-CCC-------h---hhHhhhcCCCCceEEe
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALG-----LPFIWVLGFAWRE-GLP-------D---GYLDRVSNSRQGKVVP 342 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~-----~~~iw~~~~~~~~-~l~-------~---~~~~~~~~~~nv~~~~ 342 (479)
+..+++..|. .. +.+-+..+++|+..+. .+ ++.+|++... ... + ...++....++|.+.+
T Consensus 571 ~~~vIl~vGR-l~--~~KGid~LIeA~~~L~~~~~~v~-LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG 646 (816)
T 3s28_A 571 KKPILFTMAR-LD--RVKNLSGLVEWYGKNTRLRELAN-LVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS 646 (816)
T ss_dssp TSCEEEEECC-CC--TTTTHHHHHHHHHHCHHHHHHCE-EEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC
T ss_pred CCeEEEEEcc-Cc--ccCCHHHHHHHHHHHHhhCCCeE-EEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc
Confidence 4467778888 33 3344556666666542 23 3444443210 000 1 1112222226888887
Q ss_pred ----eeehHHhhc----ccCccceEec----cchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHH
Q 011687 343 ----WAPQLKVLQ----HNAVGFYLTH----CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRD 410 (479)
Q Consensus 343 ----~~pq~~lL~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~ 410 (479)
++|+.++.. .+++ ||.- |-..++.||+++|+|+|+... ......+.+ -+.|..++.-+.++
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~d-g~~Gllv~p~D~e~ 719 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVH-GKSGFHIDPYHGDQ 719 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCB-TTTBEEECTTSHHH
T ss_pred CccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHcc-CCcEEEeCCCCHHH
Confidence 444455443 4566 7743 345789999999999999644 466677777 47889888888999
Q ss_pred HHHHHHHHh----cCHHHHHHHHH
Q 011687 411 IEDGLKKLK----EDSEMKHRLMN 430 (479)
Q Consensus 411 i~~~i~~vl----~~~~~~~~a~~ 430 (479)
++++|.+++ +|++.+++..+
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~ 743 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISK 743 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHH
Confidence 999997766 77765554433
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.69 E-value=1.4e-05 Score=82.80 Aligned_cols=120 Identities=12% Similarity=0.027 Sum_probs=78.8
Q ss_pred CCceEEeeeehH---HhhcccCccceEe---ccchhHHHHHHHhCcceecccCccchh-hHHHHHHHHhcceeeeCCCCH
Q 011687 336 RQGKVVPWAPQL---KVLQHNAVGFYLT---HCGWNSTMEAIQSGKRLLCYPVAGDQF-INCAYIVKMWKIGIRVNGFGK 408 (479)
Q Consensus 336 ~nv~~~~~~pq~---~lL~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~-~nA~rv~~~~Gvg~~~~~~~~ 408 (479)
++|.+.+++|+. .++..+|+ ||. .|+.+++.||+++|+|+|++|-..=.. .-+..+.. .|+...+.. +.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~-~~ 509 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA-DD 509 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS-SH
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC-CH
Confidence 678889999854 46788888 762 266789999999999999977432111 12345566 688766654 88
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhh
Q 011687 409 RDIEDGLKKLKEDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLT 460 (479)
Q Consensus 409 ~~i~~~i~~vl~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 460 (479)
+++++++.++++|++.+++..+-+.+.... ...-+.....+.+.+.++...
T Consensus 510 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~y~~~~ 560 (568)
T 2vsy_A 510 AAFVAKAVALASDPAALTALHARVDVLRRA-SGVFHMDGFADDFGALLQALA 560 (568)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-SSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999988666554433322200 112344555566655555444
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.62 E-value=2.6e-07 Score=80.29 Aligned_cols=141 Identities=14% Similarity=0.152 Sum_probs=94.8
Q ss_pred EEEEEeCCccccCCHHHHHHHHHHHHhC-CCCeEEEEcCCcCCCCChhhHh--hhcCCCCceEEeeeeh---HHhhcccC
Q 011687 281 VIYISFGSWVSPIGEEKVKTLALTLEAL-GLPFIWVLGFAWREGLPDGYLD--RVSNSRQGKVVPWAPQ---LKVLQHNA 354 (479)
Q Consensus 281 ~Vyvs~Gs~~~~~~~~~~~~l~~al~~~-~~~~iw~~~~~~~~~l~~~~~~--~~~~~~nv~~~~~~pq---~~lL~~~~ 354 (479)
.+++..|+ .. ...-+..+++++..+ +.+++ .++.+.....-..+.+ .....+||.+.+|+|+ ..++..++
T Consensus 24 ~~i~~~G~-~~--~~Kg~~~li~a~~~l~~~~l~-i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 24 DFWLSVNR-IY--PEKRIELQLEVFKKLQDEKLY-IVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp SCEEEECC-SS--GGGTHHHHHHHHHHCTTSCEE-EEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CEEEEEec-cc--cccCHHHHHHHHHhCCCcEEE-EEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 45667788 33 345567778888887 44444 4443322111112222 1111269999999997 55888888
Q ss_pred ccceEe---ccc-hhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHH-HHHHH
Q 011687 355 VGFYLT---HCG-WNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEM-KHRLM 429 (479)
Q Consensus 355 ~~~~I~---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~-~~~a~ 429 (479)
+ +|. +.| ..++.||+++|+|+|+... ..+...+++ -+.|..+ ..+.++++++|.++++|++. +++++
T Consensus 100 i--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~~d~~~l~~~i~~l~~~~~~~~~~~~ 171 (177)
T 2f9f_A 100 G--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-NADVNEIIDAMKKVSKNPDKFKKDCF 171 (177)
T ss_dssp E--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-CSCHHHHHHHHHHHHHCTTTTHHHHH
T ss_pred E--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-CCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 8 776 334 4599999999999999764 466667777 5788888 88899999999999977765 55555
Q ss_pred HHHH
Q 011687 430 NLYM 433 (479)
Q Consensus 430 ~l~~ 433 (479)
+.++
T Consensus 172 ~~a~ 175 (177)
T 2f9f_A 172 RRAK 175 (177)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.59 E-value=1.8e-05 Score=78.28 Aligned_cols=116 Identities=9% Similarity=-0.034 Sum_probs=77.5
Q ss_pred EEEEEeCCccccCCHHHHHHHHHHHHhCCCCe-EEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHH---hhcccCcc
Q 011687 281 VIYISFGSWVSPIGEEKVKTLALTLEALGLPF-IWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLK---VLQHNAVG 356 (479)
Q Consensus 281 ~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~-iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~---lL~~~~~~ 356 (479)
.+++..|+ .. ...+. +.++.+....+ ++.+|.+....+ ... +||.+.+++|+.+ +++.+++
T Consensus 223 ~~i~~vGr-l~-~~Kg~----~~~l~~~~~~~~l~ivG~g~~~~~------~l~--~~V~f~G~~~~~~l~~~~~~adv- 287 (406)
T 2hy7_A 223 IHAVAVGS-ML-FDPEF----FVVASKAFPQVTFHVIGSGMGRHP------GYG--DNVIVYGEMKHAQTIGYIKHARF- 287 (406)
T ss_dssp EEEEEECC-TT-BCHHH----HHHHHHHCTTEEEEEESCSSCCCT------TCC--TTEEEECCCCHHHHHHHHHTCSE-
T ss_pred cEEEEEec-cc-cccCH----HHHHHHhCCCeEEEEEeCchHHhc------CCC--CCEEEcCCCCHHHHHHHHHhcCE-
Confidence 67778888 43 23444 33443332233 344454321111 112 7899999999754 6788888
Q ss_pred ceEe---ccc-hhHHHHHH-------HhCcceecccCccchhhHHHHHHHHhcceee-eCCCCHHHHHHHHHHHhcCHH
Q 011687 357 FYLT---HCG-WNSTMEAI-------QSGKRLLCYPVAGDQFINCAYIVKMWKIGIR-VNGFGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 357 ~~I~---HgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~-~~~~~~~~i~~~i~~vl~~~~ 423 (479)
||. +.| .+++.||+ ++|+|+|+... +.+ -..|.. ++.-+.++++++|.+++++++
T Consensus 288 -~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~l~v~~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 288 -GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSRFGYTPGNADSVIAAITQALEAPR 354 (406)
T ss_dssp -EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSEEEECTTCHHHHHHHHHHHHHCCC
T ss_pred -EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 664 233 46789999 99999999865 555 466887 777899999999999997766
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.10 E-value=0.00012 Score=71.51 Aligned_cols=92 Identities=11% Similarity=0.041 Sum_probs=65.0
Q ss_pred CceEEeeeeh-HHhhcccCccceEec-----cchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHH
Q 011687 337 QGKVVPWAPQ-LKVLQHNAVGFYLTH-----CGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRD 410 (479)
Q Consensus 337 nv~~~~~~pq-~~lL~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~ 410 (479)
+|++.++... ..+++.+++ |+.- +|..++.||+++|+|+|+-|...+.+.....+.+ .|.+..+ -+.++
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~--~d~~~ 335 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV--KNETE 335 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC--CSHHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe--CCHHH
Confidence 3555554433 557888887 5541 2347899999999999987777777777776666 5877776 46899
Q ss_pred HHHHHHHHhcCHH----HHHHHHHHHHH
Q 011687 411 IEDGLKKLKEDSE----MKHRLMNLYMR 434 (479)
Q Consensus 411 i~~~i~~vl~~~~----~~~~a~~l~~~ 434 (479)
+++++.++++| + +.+++++..+.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 99999999977 5 45555554443
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.85 E-value=5.2e-05 Score=64.45 Aligned_cols=136 Identities=11% Similarity=0.114 Sum_probs=80.8
Q ss_pred cEEEEEeCCccccCCHHHHHHHHHHHHhCC--CCe-EEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHH---hhccc
Q 011687 280 SVIYISFGSWVSPIGEEKVKTLALTLEALG--LPF-IWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLK---VLQHN 353 (479)
Q Consensus 280 ~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~--~~~-iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~---lL~~~ 353 (479)
+++++..|+ .. ..+-+..+++|+..+. ..+ ++.+|.+.....-....++.. -++.+ +|+|+.+ ++..+
T Consensus 2 ~~~i~~~G~-~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~--~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGR-YS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLG--VKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESC-CS--TTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHT--CEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEec-cc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcC--CeEEE-eecCHHHHHHHHHhC
Confidence 467788888 32 3344666777777653 123 333443211100011222232 46777 9998654 77788
Q ss_pred CccceEe----ccchhHHHHHHHhCc-ceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHHHHH
Q 011687 354 AVGFYLT----HCGWNSTMEAIQSGK-RLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMKHRL 428 (479)
Q Consensus 354 ~~~~~I~----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~~~a 428 (479)
++ +|. -|...++.||+++|+ |+|+..... .....+.+ -+. .+..-+.++++++|.+++++++.+++.
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~-~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~ 147 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALD-ERS--LFEPNNAKDLSAKIDWWLENKLERERM 147 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSS-GGG--EECTTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccC-Cce--EEcCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 88 775 244579999999996 999943221 12222233 233 445578999999999999887755444
Q ss_pred H
Q 011687 429 M 429 (479)
Q Consensus 429 ~ 429 (479)
.
T Consensus 148 ~ 148 (166)
T 3qhp_A 148 Q 148 (166)
T ss_dssp H
T ss_pred H
Confidence 3
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.81 E-value=0.00018 Score=63.10 Aligned_cols=85 Identities=14% Similarity=0.036 Sum_probs=66.1
Q ss_pred CceE-EeeeehH---HhhcccCccceEecc----chhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCH
Q 011687 337 QGKV-VPWAPQL---KVLQHNAVGFYLTHC----GWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGK 408 (479)
Q Consensus 337 nv~~-~~~~pq~---~lL~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~ 408 (479)
+|.+ .+++++. .++..+++ +|.-. ...++.||+++|+|+|+.... .....+ + -+.|..++.-+.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~~~~~ 167 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVKAGDP 167 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEECTTCH
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEecCCCH
Confidence 8999 8999854 57888888 66432 257899999999999987653 555666 6 578888877889
Q ss_pred HHHHHHHHHHhc-CHHHHHHHH
Q 011687 409 RDIEDGLKKLKE-DSEMKHRLM 429 (479)
Q Consensus 409 ~~i~~~i~~vl~-~~~~~~~a~ 429 (479)
++++++|.++++ |++.+++..
T Consensus 168 ~~l~~~i~~l~~~~~~~~~~~~ 189 (200)
T 2bfw_A 168 GELANAILKALELSRSDLSKFR 189 (200)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999998 877555433
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.70 E-value=0.00064 Score=72.05 Aligned_cols=154 Identities=14% Similarity=0.206 Sum_probs=100.8
Q ss_pred CCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhc----CCCCceEEeeeehHHhh--
Q 011687 277 KPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVS----NSRQGKVVPWAPQLKVL-- 350 (479)
Q Consensus 277 ~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~----~~~nv~~~~~~pq~~lL-- 350 (479)
++..+||.||.+ .....++.+..-...|++.+.-++|........ ..++.+... ..+++.+.+.+|..+-|
T Consensus 520 p~~~v~f~~fN~-~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 520 PEDAIVYCNFNQ-LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp CTTSEEEECCSC-GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHH
T ss_pred CCCCEEEEeCCc-cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHH
Confidence 456699999999 888999999999999999998899988753210 011111100 01577788888876544
Q ss_pred -cccCccceEe---ccchhHHHHHHHhCcceecccCcc-chhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcCHHHH
Q 011687 351 -QHNAVGFYLT---HCGWNSTMEAIQSGKRLLCYPVAG-DQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKEDSEMK 425 (479)
Q Consensus 351 -~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~-DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~~~~~ 425 (479)
...|+ ++- .+|.+|+.|||+.|||+|.++-.. =-..-+-.+.. +|+...+-.-..+-+..++ ++-+|++..
T Consensus 597 ~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~~~~~Y~~~a~-~la~d~~~l 672 (723)
T 4gyw_A 597 GQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAKNRQEYEDIAV-KLGTDLEYL 672 (723)
T ss_dssp GGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCSSHHHHHHHHH-HHHHCHHHH
T ss_pred hCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccCCHHHHHHHHH-HHhcCHHHH
Confidence 45666 765 788899999999999999998432 23333444566 7887666444445555555 444566654
Q ss_pred HHHH-HHHHHHcc
Q 011687 426 HRLM-NLYMRTMG 437 (479)
Q Consensus 426 ~~a~-~l~~~~~~ 437 (479)
+..+ +|.+.+.+
T Consensus 673 ~~lr~~l~~~~~~ 685 (723)
T 4gyw_A 673 KKVRGKVWKQRIS 685 (723)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4443 34444444
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.57 E-value=0.00095 Score=68.14 Aligned_cols=143 Identities=11% Similarity=0.132 Sum_probs=96.1
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEE--cCCcCCCCChhhH-----hhhcCCCCceEEeeeehHHhh-
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVL--GFAWREGLPDGYL-----DRVSNSRQGKVVPWAPQLKVL- 350 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~--~~~~~~~l~~~~~-----~~~~~~~nv~~~~~~pq~~lL- 350 (479)
..++|.||++ .....++.++.....+++.+..++|.. +... +....+. ..+. +++.+.+.+|+.+.+
T Consensus 440 G~v~Fg~fn~-~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~--~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 440 EVVNIGIAST-TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLG--DSATAHPHSPYHQYLR 514 (631)
T ss_dssp SEEEEEEEEC-STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHG--GGEEEECCCCHHHHHH
T ss_pred CeEEEEECCc-cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCC--ccEEEcCCCCHHHHHH
Confidence 3689999999 788889999999999999888777753 3211 1111111 1233 677788888876644
Q ss_pred --cccCccceEe---ccchhHHHHHHHhCcceecccCccc-hhhHHHHHHHHhcceee-eCCCCHHHHHHHHHHHhcCHH
Q 011687 351 --QHNAVGFYLT---HCGWNSTMEAIQSGKRLLCYPVAGD-QFINCAYIVKMWKIGIR-VNGFGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 351 --~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~D-Q~~nA~rv~~~~Gvg~~-~~~~~~~~i~~~i~~vl~~~~ 423 (479)
..+|+ |+. .+|.+|++||++.|||+|..+-..= -..-+..+.. .|+... + .-+.++..+...++.+|++
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LI-A~d~eeYv~~Av~La~D~~ 590 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLI-ANTVDEYVERAVRLAENHQ 590 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGE-ESSHHHHHHHHHHHHHCHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCccee-cCCHHHHHHHHHHHhCCHH
Confidence 67777 543 3778999999999999999875421 1222233455 677652 3 2457777777778888888
Q ss_pred HHHHHHH
Q 011687 424 MKHRLMN 430 (479)
Q Consensus 424 ~~~~a~~ 430 (479)
.+++.++
T Consensus 591 ~l~~LR~ 597 (631)
T 3q3e_A 591 ERLELRR 597 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.29 E-value=0.013 Score=56.36 Aligned_cols=105 Identities=11% Similarity=0.069 Sum_probs=72.3
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccccccccCCCCCCCeE-EEeCCCCCCCCCCCCHHHHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIHNQITSSMDPRSEIS-CMSIPDGLEKNEPKDFFAIEK 85 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~i~~~~~~~~g~~-~~~i~~~l~~~~~~~~~~~~~ 85 (479)
..+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.++. -+.++ ++.++.. .....+.
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~----~p~vd~vi~~~~~-------~~~~~~~ 75 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY----NPNIDELIVVDKK-------GRHNSIS 75 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS----CTTCSEEEEECCS-------SHHHHHH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----CCCccEEEEeCcc-------cccccHH
Confidence 56899999999999999999999999987 999999999888777754 13453 5555421 1111111
Q ss_pred HHHHhchHHHHHHHHHhhccCCc-eEEEeCCCcccHHHHHHHhCCCcEe
Q 011687 86 VIENIMPIHLERLINKINEDGRV-ACVVVDLLASSAIGVACRCGVPAAG 133 (479)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~-D~vi~D~~~~~~~~~A~~lgiP~v~ 133 (479)
. +.+++++++.. ++ |++|--....-...++...|+|..+
T Consensus 76 ~--------~~~l~~~Lr~~-~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 G--------LNEVAREINAK-GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H--------HHHHHHHHHHH-CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred H--------HHHHHHHHhhC-CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1 22344444333 89 9999654445566788889999755
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.20 E-value=0.031 Score=53.33 Aligned_cols=103 Identities=18% Similarity=0.154 Sum_probs=67.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccccccccCCCCCCCe-EEEeCCCCCCCCCCCCHHHHHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIHNQITSSMDPRSEI-SCMSIPDGLEKNEPKDFFAIEKVI 87 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~i~~~~~~~~g~-~~~~i~~~l~~~~~~~~~~~~~~~ 87 (479)
|||+++.....|++.-..++.+.|+++ +.+|++++.+.+.+.++. .+.+ +++.++.. . . . .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~----~p~i~~v~~~~~~--~-~----~---~-- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR----MPEVNEAIPMPLG--H-G----A---L-- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT----CTTEEEEEEC-------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----CCccCEEEEecCC--c-c----c---c--
Confidence 689999988889999999999999987 999999999877666654 1345 34544310 0 0 0 0
Q ss_pred HHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEe
Q 011687 88 ENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAG 133 (479)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~ 133 (479)
....+.++.+.++.. +||++|--....-...++...|+|..+
T Consensus 65 ---~~~~~~~l~~~l~~~-~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ---EIGERRKLGHSLREK-RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ---CHHHHHHHHHHTTTT-TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---chHHHHHHHHHHHhc-CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011233455555443 899999322234456778888999743
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.91 E-value=0.0022 Score=61.28 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=70.8
Q ss_pred CCceEEeeeehHHh---hcccCccceEeccch---------hHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeee
Q 011687 336 RQGKVVPWAPQLKV---LQHNAVGFYLTHCGW---------NSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRV 403 (479)
Q Consensus 336 ~nv~~~~~~pq~~l---L~~~~~~~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~ 403 (479)
+||.+.+|+|+.++ |+.++.+++..-+.. +-+.|++++|+|+|+.+ ...++..+++ .|+|..+
T Consensus 214 ~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~ 288 (339)
T 3rhz_A 214 QNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIV 288 (339)
T ss_dssp TTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEE
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEe
Confidence 58999999999775 444455444423322 45789999999999865 4478888999 7999999
Q ss_pred CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHcc
Q 011687 404 NGFGKRDIEDGLKKLKED--SEMKHRLMNLYMRTMG 437 (479)
Q Consensus 404 ~~~~~~~i~~~i~~vl~~--~~~~~~a~~l~~~~~~ 437 (479)
+ +.+++.+++..+..+ .++++++++.+++++.
T Consensus 289 ~--~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 289 K--DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp S--SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT
T ss_pred C--CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 6 468888888887532 4578888888888776
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.44 E-value=0.0016 Score=64.37 Aligned_cols=84 Identities=10% Similarity=0.010 Sum_probs=60.3
Q ss_pred CCceEEeeeehHH---hhcccCccceEecc---c-hhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCH
Q 011687 336 RQGKVVPWAPQLK---VLQHNAVGFYLTHC---G-WNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGK 408 (479)
Q Consensus 336 ~nv~~~~~~pq~~---lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~ 408 (479)
++|.+.+++|+.+ +++.+++ ||.-. | ..++.||+++|+|+|+ -..+ ....+++ -..|..++.-++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~~~d~ 366 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLEQLNP 366 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEESSCSH
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeCCCCH
Confidence 6788889998765 6778888 77421 3 3568999999999998 3322 2234455 357888888899
Q ss_pred HHHHHHHHHHhcCHHHHHH
Q 011687 409 RDIEDGLKKLKEDSEMKHR 427 (479)
Q Consensus 409 ~~i~~~i~~vl~~~~~~~~ 427 (479)
++++++|.++++|++.+++
T Consensus 367 ~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 367 ENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHcCHHHHHH
Confidence 9999999999988877665
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.14 E-value=0.14 Score=52.08 Aligned_cols=164 Identities=9% Similarity=0.047 Sum_probs=91.1
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhC---CCCeEEEEcCCcCC-CCChhhHhhhcCCCCceEEeeeehH---Hhh
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEAL---GLPFIWVLGFAWRE-GLPDGYLDRVSNSRQGKVVPWAPQL---KVL 350 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~---~~~~iw~~~~~~~~-~l~~~~~~~~~~~~nv~~~~~~pq~---~lL 350 (479)
++.++++..|. .. +.+-+..+++|+.++ +.+++++..+.... ..-.......+ .++.+....+.. .++
T Consensus 325 ~~~p~i~~vgR-l~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 325 RKIPLIAFIGR-LE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYP--GKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp TTSCEEEEECC-BS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHST--TTEEEECSCCHHHHHHHH
T ss_pred CCCcEEEEEee-cc--ccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcC--CceEEEEeccHHHHHHHH
Confidence 34467778888 32 234445555565543 45554433222100 00011222333 778888766653 367
Q ss_pred cccCccceEecc---c-hhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeee----------CCCCHHHHHHHHH
Q 011687 351 QHNAVGFYLTHC---G-WNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRV----------NGFGKRDIEDGLK 416 (479)
Q Consensus 351 ~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~----------~~~~~~~i~~~i~ 416 (479)
+.+++ ||.-. | -.+++||+++|+|+|+.... .....|.+ -.-|... +..+.+.|+++|+
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~d-g~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIE-GKTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCB-TTTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeC-CCCccccccCCCceeEECCCCHHHHHHHHH
Confidence 88888 77532 2 35889999999999987664 56666666 3455533 2255788999998
Q ss_pred HHh---cCHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhh
Q 011687 417 KLK---EDSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLT 460 (479)
Q Consensus 417 ~vl---~~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 460 (479)
+++ +++.+++..++ .++. .-|=++..++..+.++.+.
T Consensus 473 ral~~~~~~~~~~~~~~---am~~----~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 473 RAIKVVGTPAYEEMVRN---CMNQ----DLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHTTSHHHHHHHHH---HHHS----CCSSHHHHHHHHHHHHTTC
T ss_pred HHHHhcCcHHHHHHHHH---HHHh----cCCHHHHHHHHHHHHHHhh
Confidence 877 45554433221 2222 1223344555555555553
No 57
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=90.51 E-value=2.6 Score=43.53 Aligned_cols=78 Identities=10% Similarity=0.013 Sum_probs=49.4
Q ss_pred CCceEE---eeeeh---------HHhhcccCccceEecc---c-hhHHHHHHHhCcceecccCccchhhHHHHHHHH---
Q 011687 336 RQGKVV---PWAPQ---------LKVLQHNAVGFYLTHC---G-WNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKM--- 396 (479)
Q Consensus 336 ~nv~~~---~~~pq---------~~lL~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~--- 396 (479)
++|.++ .|++. .++++.+++ ||.-. | -.+.+||+++|+|+|+.-.. .....+.++
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g----G~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS----GFGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB----HHHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC----Chhhhhhccccc
Confidence 455554 77765 457888888 76543 3 46899999999999987665 334444331
Q ss_pred ---hcceeeeC---CCCHHHHHHHHHHHh
Q 011687 397 ---WKIGIRVN---GFGKRDIEDGLKKLK 419 (479)
Q Consensus 397 ---~Gvg~~~~---~~~~~~i~~~i~~vl 419 (479)
-+.|..+. ..+.+++.++|.++|
T Consensus 564 ~~~~~tG~lV~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAKDYGIYIVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHHHTTEEEECCSSSCHHHHHHHHHHHH
T ss_pred cCCCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 13566552 256666655555554
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.71 E-value=7.3 Score=38.71 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=68.6
Q ss_pred ceE-EeeeehHH---hhcccCccceEe---ccch-hHHHHHHHhCc-----ceecccCccchhhHHHHHHHHhcceeeeC
Q 011687 338 GKV-VPWAPQLK---VLQHNAVGFYLT---HCGW-NSTMEAIQSGK-----RLLCYPVAGDQFINCAYIVKMWKIGIRVN 404 (479)
Q Consensus 338 v~~-~~~~pq~~---lL~~~~~~~~I~---HgG~-~s~~eal~~Gv-----P~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~ 404 (479)
|.+ .+++++.+ ++..+|+ ||. .=|+ .++.||+++|+ |+|+..+.+- +.. +.-|..++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~----l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANE----LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGT----CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHH----hCCeEEEC
Confidence 443 37788765 6677888 664 2344 58899999998 6766554321 111 12356777
Q ss_pred CCCHHHHHHHHHHHhcC-HH-HHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhh
Q 011687 405 GFGKRDIEDGLKKLKED-SE-MKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKL 459 (479)
Q Consensus 405 ~~~~~~i~~~i~~vl~~-~~-~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 459 (479)
..+.+.++++|.++|++ ++ -+++.++..+.++. -+.....+.+++.++..
T Consensus 403 p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 78899999999999974 33 34444455554443 23556677777777665
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=86.51 E-value=2.2 Score=38.11 Aligned_cols=113 Identities=15% Similarity=0.109 Sum_probs=60.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHh
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENI 90 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 90 (479)
|||++.-=-+. +---...|+++|.+.| +|+++.+...+........-...+.+..+..+..-......
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~v~GTP---------- 69 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFYTVIDGTP---------- 69 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEEEETTCCH----------
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCeEEECCCH----------
Confidence 78877764443 4455778899999888 99999998754444321222223444433321100000000
Q ss_pred chHHHHHHHHHhhccCCceEEEeCC----------Cccc---HHHHHHHhCCCcEeEcc
Q 011687 91 MPIHLERLINKINEDGRVACVVVDL----------LASS---AIGVACRCGVPAAGFWP 136 (479)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~D~vi~D~----------~~~~---~~~~A~~lgiP~v~~~~ 136 (479)
..+..-.+..+....+||+||+-. ++.+ |..-|..+|||.|.+|-
T Consensus 70 -aDCV~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 70 -ADCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp -HHHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -HHHHHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 111221233333223899999642 2222 34556788999999854
No 60
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=86.42 E-value=3.3 Score=35.54 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=61.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcc------ccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFI------HNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAI 83 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~------~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~ 83 (479)
+-.|.+++..+.|-....+.+|-..+.+|++|.++..-.- .+.++. -+++++....++..+. .....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-----L~v~~~~~g~gf~~~~-~~~~~- 100 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-----HGVEFQVMATGFTWET-QNREA- 100 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-----GTCEEEECCTTCCCCG-GGHHH-
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-----CCcEEEEcccccccCC-CCcHH-
Confidence 3477788888899999999999999999999999943210 123333 2477777776544321 11111
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA 117 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~ 117 (479)
-.......+..+.+.+.+ .++|+||.|.+.
T Consensus 101 ---~~~~a~~~l~~a~~~l~~-~~yDlvILDEi~ 130 (196)
T 1g5t_A 101 ---DTAACMAVWQHGKRMLAD-PLLDMVVLDELT 130 (196)
T ss_dssp ---HHHHHHHHHHHHHHHTTC-TTCSEEEEETHH
T ss_pred ---HHHHHHHHHHHHHHHHhc-CCCCEEEEeCCC
Confidence 112234445545555433 489999999854
No 61
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=86.20 E-value=2.4 Score=36.31 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=50.1
Q ss_pred EEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHh
Q 011687 12 KILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENI 90 (479)
Q Consensus 12 ~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 90 (479)
.|+|.. -|+-|=..-...||..|+++|++|.++-.+..............++.+.+.+.
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~-------------------- 62 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS-------------------- 62 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS--------------------
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc--------------------
Confidence 444443 36779999999999999999999999987532111111011123455544331
Q ss_pred chHHHHHHHHHhhccCCceEEEeCC
Q 011687 91 MPIHLERLINKINEDGRVACVVVDL 115 (479)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~D~vi~D~ 115 (479)
..+.+.++.+.. ++|+||.|.
T Consensus 63 --~~l~~~l~~l~~--~yD~viiD~ 83 (206)
T 4dzz_A 63 --EKDVYGIRKDLA--DYDFAIVDG 83 (206)
T ss_dssp --HHHHHTHHHHTT--TSSEEEEEC
T ss_pred --HHHHHHHHHhcC--CCCEEEEEC
Confidence 334555655533 699999996
No 62
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=84.22 E-value=2.2 Score=38.13 Aligned_cols=37 Identities=22% Similarity=0.397 Sum_probs=29.3
Q ss_pred CCEEEEecC--CCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPY--PAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~--~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+++.+|++. .+-|=..-...|++.|+++|++|.++=+
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 355555553 3559999999999999999999999843
No 63
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=83.87 E-value=1.1 Score=37.79 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=34.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQIT 54 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~ 54 (479)
+||++...|+.|=+. ...+.+.|+++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 678777777776665 8899999999999999999987655553
No 64
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=82.56 E-value=3.6 Score=36.94 Aligned_cols=112 Identities=15% Similarity=0.097 Sum_probs=56.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHh
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENI 90 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 90 (479)
.|||+.-=-+. +---+..|+++|.+.| +|+++.+...+........-...+++..+.............
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~~~v~GTPa--------- 70 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFYTVIDGTPA--------- 70 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEEEETTCCHH---------
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccceeecCCChH---------
Confidence 46666553332 3344668899998888 599999876444333212212234443332110000000000
Q ss_pred chHHHHHHHHHhhccCCceEEEeC----------CCc---ccHHHHHHHhCCCcEeEc
Q 011687 91 MPIHLERLINKINEDGRVACVVVD----------LLA---SSAIGVACRCGVPAAGFW 135 (479)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~D~vi~D----------~~~---~~~~~~A~~lgiP~v~~~ 135 (479)
.+..--+..+..+.+||+||+- .++ .+|..=|..+|||.|.+|
T Consensus 71 --DCV~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S 126 (251)
T 2wqk_A 71 --DCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFS 126 (251)
T ss_dssp --HHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEE
T ss_pred --HHHhhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEE
Confidence 1111112222222389999982 222 234566688999999985
No 65
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.12 E-value=0.54 Score=45.98 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=31.4
Q ss_pred CCCEEEEecCC---C--CCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 9 KKNKILMVPYP---A--QGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~---~--~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.+|||++++.. + .|=...+..+|+.|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 57999998843 2 1333568999999999999999999853
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=81.99 E-value=9.4 Score=37.95 Aligned_cols=110 Identities=10% Similarity=0.001 Sum_probs=74.6
Q ss_pred CceEEeeeehHH---hhcccCccceEe---ccchhH-HHHHHHhC---cceecccCccchhhHHHHHHHHhcceeeeCCC
Q 011687 337 QGKVVPWAPQLK---VLQHNAVGFYLT---HCGWNS-TMEAIQSG---KRLLCYPVAGDQFINCAYIVKMWKIGIRVNGF 406 (479)
Q Consensus 337 nv~~~~~~pq~~---lL~~~~~~~~I~---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~ 406 (479)
.|.+...+|+.+ ++..+++ |+. .=|+|. ..||+++| .|+|+--+.+ .+.-+.+ -|+.++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECCC
Confidence 567777788754 5666777 554 357765 58999996 6666554442 2332322 37888888
Q ss_pred CHHHHHHHHHHHhcC--HHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhh
Q 011687 407 GKRDIEDGLKKLKED--SEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLT 460 (479)
Q Consensus 407 ~~~~i~~~i~~vl~~--~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 460 (479)
+.+.++++|.++|++ ++-+++.+++.+.+.. -+...-.+.+++.+....
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAADH 474 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhcc
Confidence 999999999999965 4567777777777766 345566777777776543
No 67
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=81.49 E-value=1.3 Score=38.60 Aligned_cols=44 Identities=14% Similarity=0.063 Sum_probs=36.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQIT 54 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~ 54 (479)
++||++...|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 4788888888888777 8899999999999999999987655553
No 68
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=81.23 E-value=1.2 Score=45.26 Aligned_cols=39 Identities=21% Similarity=0.396 Sum_probs=29.5
Q ss_pred CCCEEEEecC---C---CCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPY---P---AQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~---~---~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|||+|++. | +.|=-.-+-+|+++|+++||+|++++|.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 3799999973 2 2232234668999999999999999964
No 69
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=80.05 E-value=5.8 Score=36.97 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=24.6
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|++|||+|+..+.. .....++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 35799999987643 345567888899998876663
No 70
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=78.71 E-value=9.6 Score=33.57 Aligned_cols=104 Identities=6% Similarity=-0.035 Sum_probs=59.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCcc----ccccccCCCCCCCeEEEeCCC-CCCCCCCCCHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFI----HNQITSSMDPRSEISCMSIPD-GLEKNEPKDFF 81 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~-~l~~~~~~~~~ 81 (479)
++|||+|+..|+.+ -+.++.+.|.+. +++|..+.+... .+..++ .|+.+..++. .+.. .
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~~~~~~~------r 86 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR-----AGVDALHMDPAAYPS------R 86 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECCGGGSSS------H
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEECcccccc------h
Confidence 45799999877653 366777788776 688866665321 123344 6888776542 1110 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 82 AIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||+-.+. .-...+-+.+...++-++++
T Consensus 87 -------~~~~~~~~~~l~~~----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 -------TAFDAALAERLQAY----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -------HHHHHHHHHHHHHT----TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -------hhccHHHHHHHHhc----CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 11222344455555 99999987654 43444445555566666544
No 71
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=77.37 E-value=8.9 Score=33.44 Aligned_cols=102 Identities=10% Similarity=0.059 Sum_probs=56.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCC--eEEEEcCCcc----ccccccCCCCCCCeEEEeCCCC-CCCCCCCCHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGF--EPIVITPEFI----HNQITSSMDPRSEISCMSIPDG-LEKNEPKDFFAI 83 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh--~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~~~~ 83 (479)
|||+|+..|+.+ -+.++.+.|.+.+| +|..+.+... .+..++ .|+.+..++.. +. +
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~~~~-----~---- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKK-----HNVECKVIQRKEFP-----S---- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHH-----HTCCEEECCGGGSS-----S----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHH-----cCCCEEEeCccccc-----c----
Confidence 688888766653 46677788888888 7765554321 122333 56766654421 11 0
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.......+.+.++++ ++|+||+-.+. .-...+-+.+.-.++-++++
T Consensus 65 ----r~~~~~~~~~~l~~~----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 ----KKEFEERMALELKKK----GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----HHHHHHHHHHHHHHT----TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----hhhhhHHHHHHHHhc----CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011222334455555 99999987654 33334444555556665544
No 72
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=77.12 E-value=1.6 Score=40.77 Aligned_cols=45 Identities=13% Similarity=0.034 Sum_probs=40.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCcccccccc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIHNQITS 55 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~i~~ 55 (479)
|||+++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 689999999999999999999999987 999999999887666654
No 73
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=76.25 E-value=2.8 Score=33.78 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=33.7
Q ss_pred CCCEEEEec-CCCC-CCHHHHHHHHHHHHhCCCeEEEEcCCccccccc
Q 011687 9 KKNKILMVP-YPAQ-GHVTPMHKLASILTSRGFEPIVITPEFIHNQIT 54 (479)
Q Consensus 9 ~~~~i~~~~-~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~ 54 (479)
+-||++++- .|.. ..+--.+=++..|..+||+|++++++...+.++
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 456666665 4655 455556778999999999999999987666654
No 74
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=76.18 E-value=9 Score=33.82 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=28.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|||.|+..|..|- +||..|.++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 468999999988875 5889999999999987764
No 75
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=75.89 E-value=7 Score=36.61 Aligned_cols=101 Identities=7% Similarity=0.027 Sum_probs=54.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc--------cccccccCCCCCCCeEEEeCCCCCCCCCCCCHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF--------IHNQITSSMDPRSEISCMSIPDGLEKNEPKDFF 81 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~--------~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~ 81 (479)
+|||+|+. --+....+.++|.+.||+|..+.+.. ..+...+ .|+.+..... +..+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~-----~gIpv~~~~~-~~~~------ 84 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEK-----DGVPVFKYSR-WRAK------ 84 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHH-----HTCCEEECSC-CEET------
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHH-----cCCCEEecCc-cccc------
Confidence 48999992 22334456788999999987666521 1111222 4555544331 1100
Q ss_pred HHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcchh
Q 011687 82 AIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPAM 138 (479)
Q Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 138 (479)
......+.+.++++ ++|++|+-.+. .-...+-+.....++-++++.
T Consensus 85 -------~~~~~~~~~~l~~~----~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 -------GQALPDVVAKYQAL----GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -------TEECHHHHHHHHTT----CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -------ccccHHHHHHHHhc----CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 01112233445555 89999977654 333344444555677776654
No 76
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=75.83 E-value=3.4 Score=37.13 Aligned_cols=123 Identities=16% Similarity=0.055 Sum_probs=64.0
Q ss_pred CCEEEEecC-C-CCCCHHHHHHHHHHHHhCCCeEEEEcC----C--cc--ccccccCCCCCCCeEEEeCCCCCCCCCCCC
Q 011687 10 KNKILMVPY-P-AQGHVTPMHKLASILTSRGFEPIVITP----E--FI--HNQITSSMDPRSEISCMSIPDGLEKNEPKD 79 (479)
Q Consensus 10 ~~~i~~~~~-~-~~gH~~p~l~la~~L~~rGh~V~~~~~----~--~~--~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~ 79 (479)
.|+.+|++. . +-|=..-...|++.|+++|++|.++=+ . .. ...+.+........+.+.+..... ..
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g~~~~~~~~~~~~p~s----P~ 100 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAGVTQLAGLARYPQPMA----PA 100 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHCCCEEEEEEECSSSSC----HH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcCCCCCCCCeeECCCCC----hH
Confidence 456565553 3 459999999999999999999999742 0 00 001111000000011122221111 01
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc----------ccHHHHHHHhCCCcEeEcchh
Q 011687 80 FFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA----------SSAIGVACRCGVPAAGFWPAM 138 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~----------~~~~~~A~~lgiP~v~~~~~~ 138 (479)
....+........+.+.+.++++. .++|+||+|.-. .....+|+.++.|++.+....
T Consensus 101 ~aa~~~~~~~~~~~~i~~~~~~l~--~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 101 AAAEHAGMALPARDQIVRLIADLD--RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHTTC--CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHcCCCCCCHHHHHHHHHHHH--hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 111100000112233444444442 379999988631 345789999999999986553
No 77
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=75.58 E-value=1.2 Score=38.28 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=35.3
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccccc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQI 53 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i 53 (479)
+.+||++...|+.|-+. ...+.+.|.++|++|.++.++...+.+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 35688888888877765 689999999999999999997654444
No 78
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=75.32 E-value=13 Score=30.47 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=77.4
Q ss_pred cEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhccc-Cccce
Q 011687 280 SVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHN-AVGFY 358 (479)
Q Consensus 280 ~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~-~~~~~ 358 (479)
+.|-|-+|| ..+....++....++.++..+-..+-+-+. .|+.+.+- +... ... .++.|
T Consensus 3 ~~V~Iimgs---~SD~~v~~~a~~~l~~~gi~~ev~V~saHR--~p~~~~~~------------~~~a---~~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGS---SSDMGHAEKIASELKTFGIEYAIRIGSAHK--TAEHVVSM------------LKEY---EALDRPKLY 62 (159)
T ss_dssp CEEEEEESS---GGGHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHHHHH------------HHHH---HTSCSCEEE
T ss_pred CeEEEEECc---HHHHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHHHHH------------HHHh---hhcCCCcEE
Confidence 467777888 455677888889999998877555554332 34332211 1111 111 13338
Q ss_pred Eeccch----hHHHHHHHhCcceecccCccc---hhhHHHHHHHHh--ccee-eeCC-CCHHHHHHHHHHHhcCHHHHHH
Q 011687 359 LTHCGW----NSTMEAIQSGKRLLCYPVAGD---QFINCAYIVKMW--KIGI-RVNG-FGKRDIEDGLKKLKEDSEMKHR 427 (479)
Q Consensus 359 I~HgG~----~s~~eal~~GvP~l~~P~~~D---Q~~nA~rv~~~~--Gvg~-~~~~-~~~~~i~~~i~~vl~~~~~~~~ 427 (479)
|.=+|. .++..++ .-+|+|.+|...- -.+ -.-+.+ . |+.+ .+++ .+...++..|-. ++|++++++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~-~~d~~l~~k 138 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALVLEPKNAALLAARIFS-LYDKEIADS 138 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEECCSHHHHHHHHHHHHT-TTCHHHHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEecCchHHHHHHHHHHh-CCCHHHHHH
Confidence 877774 3444443 5699999997532 122 122333 3 3332 2344 556555555533 368999999
Q ss_pred HHHHHHHHcc
Q 011687 428 LMNLYMRTMG 437 (479)
Q Consensus 428 a~~l~~~~~~ 437 (479)
.+..+++...
T Consensus 139 l~~~r~~~~~ 148 (159)
T 3rg8_A 139 VKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887766
No 79
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=75.28 E-value=2.1 Score=36.86 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=35.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCccccccc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPEFIHNQIT 54 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~i~ 54 (479)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 578888888877766 89999999999 99999999987655554
No 80
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=74.61 E-value=2.5 Score=44.56 Aligned_cols=114 Identities=9% Similarity=0.063 Sum_probs=79.9
Q ss_pred eeeehHHhhcccCccceEeccchhHHHHHHHhCcceecccCccchhhHHHHHHHHhcceeee----CC---CCHHHHHHH
Q 011687 342 PWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRV----NG---FGKRDIEDG 414 (479)
Q Consensus 342 ~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~----~~---~~~~~i~~~ 414 (479)
++.+-.++|..+|+ +||=- +..+.|.+..++|+|.+....|+...- . .|.=..+ .. .+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CCcccChhHhCCCCeECCHHHHHHH
Confidence 55667889999888 99974 568899999999999998776665331 1 1222111 11 788999999
Q ss_pred HHHHhc-CHHHHHHHHHHHHHHcccccCCCchhHHHHHHHHHHHhhhcCCc
Q 011687 415 LKKLKE-DSEMKHRLMNLYMRTMGDDGARARVMNNLTGFVDDLSKLTRNDH 464 (479)
Q Consensus 415 i~~vl~-~~~~~~~a~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 464 (479)
|+.... +..++++.+++.+++-.. ..|.++++.++.+.+....-.++.+
T Consensus 677 i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~~~~~~ 726 (729)
T 3l7i_A 677 LKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQLEHHH 726 (729)
T ss_dssp HTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHHCC---
T ss_pred HhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCcccccc
Confidence 988874 467888899999998765 5677777777777666555444443
No 81
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=74.53 E-value=3.7 Score=35.67 Aligned_cols=45 Identities=11% Similarity=0.178 Sum_probs=36.8
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccccccc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITS 55 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~ 55 (479)
+.+||++...|+.+-+. ...+.+.|.++| +|.++.++...+.+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 45789888888888766 899999999999 9999999876665543
No 82
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=73.87 E-value=31 Score=28.80 Aligned_cols=137 Identities=16% Similarity=0.157 Sum_probs=79.4
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccce
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFY 358 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 358 (479)
+|.|-|-+|| ..+....+...+.|++++..+-..+.+-++ .|+.+.+-. - -.....++.+
T Consensus 22 kp~V~IimGS---~SD~~v~~~a~~~L~~~gI~~e~~V~SAHR--tp~~l~~~~------------~---~a~~~g~~Vi 81 (181)
T 4b4k_A 22 KSLVGVIMGS---TSDWETMKYACDILDELNIPYEKKVVSAHR--TPDYMFEYA------------E---TARERGLKVI 81 (181)
T ss_dssp CCSEEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHHHH------------H---HTTTTTCCEE
T ss_pred CccEEEEECC---HhHHHHHHHHHHHHHHcCCCeeEEEEcccc--ChHHHHHHH------------H---HHHhcCceEE
Confidence 5678899999 445677888999999999887666655432 333322111 0 0111122236
Q ss_pred Eeccch----hHHHHHHHhCcceecccCccc---hhhHHHHHHHHhcceeeeCC--C------CHHHHHHHHHHHhcCHH
Q 011687 359 LTHCGW----NSTMEAIQSGKRLLCYPVAGD---QFINCAYIVKMWKIGIRVNG--F------GKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 359 I~HgG~----~s~~eal~~GvP~l~~P~~~D---Q~~nA~rv~~~~Gvg~~~~~--~------~~~~i~~~i~~vl~~~~ 423 (479)
|.=.|. .++. |-..-+|+|.+|.... -.+.-.-+.+ +=-|+.+-. . +..-++..|-. +.|++
T Consensus 82 Ia~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~~ 158 (181)
T 4b4k_A 82 IAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHDD 158 (181)
T ss_dssp EEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCHH
T ss_pred EEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCHH
Confidence 665553 2333 3345689999998653 3333334555 445554422 2 22333333322 37899
Q ss_pred HHHHHHHHHHHHccc
Q 011687 424 MKHRLMNLYMRTMGD 438 (479)
Q Consensus 424 ~~~~a~~l~~~~~~~ 438 (479)
++++.+..++...+.
T Consensus 159 l~~kl~~~r~~~~~~ 173 (181)
T 4b4k_A 159 IHDALELRREAIEKD 173 (181)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888887664
No 83
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=73.25 E-value=17 Score=35.24 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=51.3
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCe-EEEeCCCCCCCCCCCCHHHHHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEI-SCMSIPDGLEKNEPKDFFAIEKV 86 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~-~~~~i~~~l~~~~~~~~~~~~~~ 86 (479)
.+.++|+++..+.. + .-+.++.++.|++|+++.+.. +.... ..... .++.++... +...+.
T Consensus 3 ~~~k~l~Il~~~~~-~----~~i~~aa~~lG~~vv~v~~~~--~~~~~---~~~~~d~~~~~~~~~------d~~~~~-- 64 (425)
T 3vot_A 3 KRNKNLAIICQNKH-L----PFIFEEAERLGLKVTFFYNSA--EDFPG---NLPAVERCVPLPLFE------DEEAAM-- 64 (425)
T ss_dssp CCCCEEEEECCCTT-C----CHHHHHHHHTTCEEEEEEETT--SCCCC---SCTTEEEEEEECTTT------CHHHHH--
T ss_pred CCCcEEEEECCChh-H----HHHHHHHHHCCCEEEEEECCC--ccccc---CHhhccEEEecCCCC------CHHHHH--
Confidence 35678888864432 2 236788888999999987643 11111 00112 344444211 111111
Q ss_pred HHHhchHHHHHHHHHhhccCCceEEEeC--CCcccHHHHHHHhCCCc
Q 011687 87 IENIMPIHLERLINKINEDGRVACVVVD--LLASSAIGVACRCGVPA 131 (479)
Q Consensus 87 ~~~~~~~~l~~~l~~l~~~~~~D~vi~D--~~~~~~~~~A~~lgiP~ 131 (479)
..+.++.++. ++|.|+.- .....+..+|+.+|+|.
T Consensus 65 ------~~~~~~~~~~----~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 ------DVVRQTFVEF----PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ------HHHHHHHHHS----CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ------HHHHHhhhhc----CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1122233333 89999853 32345567889999994
No 84
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=71.85 E-value=39 Score=28.03 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=80.2
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGF 357 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 357 (479)
.++.|-|-+|| ..+....++....++.++..+-..+-+-+. .|+.+.+- +-... -...++
T Consensus 6 ~~~~V~IimgS---~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR--~p~~~~~~------------~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 6 ERPRVGVIMGS---DSDWPVMADAAAALAEFDIPAEVRVVSAHR--TPEAMFSY------------ARGAA-ARGLEV-- 65 (174)
T ss_dssp CCCSEEEEESC---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHHHHH------------HHHHH-HHTCCE--
T ss_pred CCCeEEEEECc---HHhHHHHHHHHHHHHHcCCCEEEEEECCCC--CHHHHHHH------------HHHHH-hCCCCE--
Confidence 34567778888 455677888999999999887555554332 34332211 11000 022344
Q ss_pred eEeccch----hHHHHHHHhCcceecccCccchh-hHHH--HHHHHh--cc--eee-eCC-CCHHHHHHHHHHHhcCHHH
Q 011687 358 YLTHCGW----NSTMEAIQSGKRLLCYPVAGDQF-INCA--YIVKMW--KI--GIR-VNG-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 358 ~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~-~nA~--rv~~~~--Gv--g~~-~~~-~~~~~i~~~i~~vl~~~~~ 424 (479)
||.=+|. .++..++ .-+|+|.+|...-.. .... -+.+ . |+ +.. +++ .+...++..|-.+ .|+++
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~~-~d~~l 142 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLGA-ANPQL 142 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHHT-TCHHH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHhC-CCHHH
Confidence 7777664 4444443 569999999864322 1111 2333 2 32 221 223 5556666555443 68999
Q ss_pred HHHHHHHHHHHccc
Q 011687 425 KHRLMNLYMRTMGD 438 (479)
Q Consensus 425 ~~~a~~l~~~~~~~ 438 (479)
+++.+..++++++.
T Consensus 143 ~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 143 RARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888874
No 85
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=71.59 E-value=13 Score=34.54 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=25.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|||+|+..+..+- ...++|.+.||+|..+.+.
T Consensus 4 mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 4 MIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECC
T ss_pred ceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeC
Confidence 48999998886653 4457777889999877764
No 86
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=71.30 E-value=8.4 Score=35.81 Aligned_cols=97 Identities=12% Similarity=0.137 Sum_probs=54.0
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccc--------------ccccCCCCCCCeEEEeCCCCCCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHN--------------QITSSMDPRSEISCMSIPDGLEK 74 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~--------------~i~~~~~~~~g~~~~~i~~~l~~ 74 (479)
++|||+|+..+..+ ....++|.+.||+|..+.+...++ ...+ .|+.+.. +..+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~-----~gIpv~~-~~~~~- 69 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEE-----KGLPVFQ-PVSLR- 69 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHH-----TTCCEEC-CSCSC-
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHH-----cCCcEEe-cCCCC-
Confidence 46999999876533 444567777899998666532111 1122 3444431 11110
Q ss_pred CCCCCHHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcchh
Q 011687 75 NEPKDFFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPAM 138 (479)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 138 (479)
...+.+.++++ ++|++|+-.+. .-...+-+.....++-++++.
T Consensus 70 -----------------~~~~~~~l~~~----~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 70 -----------------PQENQQLVAEL----QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp -----------------SHHHHHHHHHT----TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred -----------------CHHHHHHHHhc----CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 12234456666 99999976653 333344455556677776664
No 87
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=71.27 E-value=4.6 Score=34.83 Aligned_cols=45 Identities=4% Similarity=-0.090 Sum_probs=35.2
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccccc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQI 53 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i 53 (479)
+.+||++...|+.+-+.=...+.+.|.++|++|.++.++...+.+
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 457888888887444427899999999999999999997654444
No 88
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=70.52 E-value=11 Score=33.80 Aligned_cols=46 Identities=17% Similarity=0.093 Sum_probs=30.8
Q ss_pred CCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccccc
Q 011687 6 CTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQI 53 (479)
Q Consensus 6 ~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i 53 (479)
..+++|||++.-=-+. +---...|+++|.+ +|+|+++.+...+...
T Consensus 7 ~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 7 TATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp ----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred ccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 3456799888775444 44556788888876 8999999998754443
No 89
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=70.30 E-value=45 Score=27.55 Aligned_cols=139 Identities=15% Similarity=0.152 Sum_probs=78.2
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGF 357 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 357 (479)
-+|.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+-. -+.+ -...++
T Consensus 10 ~~~~V~IimGS---~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~l~~~~------------~~a~-~~g~~V-- 69 (170)
T 1xmp_A 10 MKSLVGVIMGS---TSDWETMKYACDILDELNIPYEKKVVSAHR--TPDYMFEYA------------ETAR-ERGLKV-- 69 (170)
T ss_dssp -CCSEEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHHHH------------HHTT-TTTCCE--
T ss_pred CCCcEEEEECc---HHHHHHHHHHHHHHHHcCCCEEEEEEeccC--CHHHHHHHH------------HHHH-hCCCcE--
Confidence 46678888888 456777888999999998887555544322 333321110 0000 011234
Q ss_pred eEeccchhHHHHHHH---hCcceecccCccch--hhHHH-HHHHHh--ccee---eeC--C-CCHHHHHHHHHHHhcCHH
Q 011687 358 YLTHCGWNSTMEAIQ---SGKRLLCYPVAGDQ--FINCA-YIVKMW--KIGI---RVN--G-FGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 358 ~I~HgG~~s~~eal~---~GvP~l~~P~~~DQ--~~nA~-rv~~~~--Gvg~---~~~--~-~~~~~i~~~i~~vl~~~~ 423 (479)
||.=+|...-+-... .-+|+|.+|..... -..|. -+.+ + |+.+ .++ + .+..-++..|- -+.|++
T Consensus 70 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivq-mP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~ 147 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHDD 147 (170)
T ss_dssp EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCHH
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCHH
Confidence 777666433333322 46899999986521 11111 1222 1 3322 223 2 55555665554 346899
Q ss_pred HHHHHHHHHHHHccc
Q 011687 424 MKHRLMNLYMRTMGD 438 (479)
Q Consensus 424 ~~~~a~~l~~~~~~~ 438 (479)
++++.+..+++..+.
T Consensus 148 l~~kl~~~r~~~~~~ 162 (170)
T 1xmp_A 148 IHDALELRREAIEKD 162 (170)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888764
No 90
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=69.56 E-value=22 Score=30.78 Aligned_cols=102 Identities=2% Similarity=0.016 Sum_probs=58.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCcc----ccccccCCCCCCCeEEEeCCC-CCCCCCCCCHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFI----HNQITSSMDPRSEISCMSIPD-GLEKNEPKDFFAI 83 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~-~l~~~~~~~~~~~ 83 (479)
|||+++-.|+.+ -+.++.+.|.+. +|+|..+.+... .+...+ .|+.+..++. .+. +
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~~~~~-----~---- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSPKDYP-----S---- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGGGSS-----S----
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCccccc-----c----
Confidence 688888777654 355677788776 789876665421 122344 6777765542 111 0
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.......+.+.++++ +||+||.-.+. .-...+-+.+.-.++-++++
T Consensus 67 ----~~~~~~~~~~~l~~~----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 ----KAAFESEILRELKGR----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----HHHHHHHHHHHHHHT----TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----hhhhHHHHHHHHHhc----CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 011122334455555 99999987654 44444455555566666544
No 91
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=69.38 E-value=16 Score=35.79 Aligned_cols=42 Identities=26% Similarity=0.382 Sum_probs=35.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHN 51 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 51 (479)
+..|+++..++.|-..-+..||..|+++|++|.+++.+.++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 456777777888999999999999999999999999876543
No 92
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=69.25 E-value=6.7 Score=31.40 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=33.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.+|++.+.++-.|-....=++..|..+|++|.+....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 46888888888899999999999999999999988763
No 93
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=69.23 E-value=4.5 Score=32.80 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=30.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+..+++..+..-.+++.+.+|...++.|++|+++.+..
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~ 46 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFW 46 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehH
Confidence 34444555677889999999999999999999999864
No 94
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=68.55 E-value=44 Score=27.65 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=78.0
Q ss_pred CCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCcc
Q 011687 277 KPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVG 356 (479)
Q Consensus 277 ~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 356 (479)
.+.|.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+- +-. .....++
T Consensus 10 ~~~P~V~IimGS---~SD~~v~~~a~~~l~~~gi~~ev~V~saHR--~p~~l~~~------------~~~---a~~~g~~ 69 (173)
T 4grd_A 10 HSAPLVGVLMGS---SSDWDVMKHAVAILQEFGVPYEAKVVSAHR--MPDEMFDY------------AEK---ARERGLR 69 (173)
T ss_dssp CSSCSEEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHHH------------HHH---HTTTTCS
T ss_pred CCCCeEEEEeCc---HhHHHHHHHHHHHHHHcCCCEEEEEEcccc--CHHHHHHH------------HHH---HHhcCCe
Confidence 356688889998 456677888899999999887555554432 34332211 100 1111222
Q ss_pred ceEeccch----hHHHHHHHhCcceecccCccchh---hHHHHHHHHh--ccee--eeCC----CCHHHHHHHHHHHhcC
Q 011687 357 FYLTHCGW----NSTMEAIQSGKRLLCYPVAGDQF---INCAYIVKMW--KIGI--RVNG----FGKRDIEDGLKKLKED 421 (479)
Q Consensus 357 ~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~---~nA~rv~~~~--Gvg~--~~~~----~~~~~i~~~i~~vl~~ 421 (479)
.||.=.|. .++..+ ..-+|+|.+|...... +--.-+.+ + |+.. ..-+ .+..-++..|- .++|
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d 146 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SGNS 146 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSC
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cCCC
Confidence 36665553 344443 5579999999765422 21122333 2 3322 2111 33344444442 2478
Q ss_pred HHHHHHHHHHHHHHccc
Q 011687 422 SEMKHRLMNLYMRTMGD 438 (479)
Q Consensus 422 ~~~~~~a~~l~~~~~~~ 438 (479)
+++++|..+.+++.++.
T Consensus 147 ~~l~~kl~~~r~~~~~~ 163 (173)
T 4grd_A 147 VDYANRLAAFRVRQNEA 163 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999988887764
No 95
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.54 E-value=20 Score=35.23 Aligned_cols=87 Identities=16% Similarity=0.135 Sum_probs=54.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIEN 89 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~ 89 (479)
.+|++++.. -.-...+++.|.+-|.+|..+.+....+..++ ... .+... ..+.
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~-----~~~----------~~v~~------~D~~- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVD-----SPL----------PSVRV------GDLE- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTT-----TTS----------SCEEE------SHHH-
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhh-----Ccc----------CcEEe------CCHH-
Confidence 467777543 34567889999999999998887542222221 000 00000 0001
Q ss_pred hchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeE
Q 011687 90 IMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGF 134 (479)
Q Consensus 90 ~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~ 134 (479)
.+++++++. +||++|.+.. +..+|+++|||++.+
T Consensus 366 ----~le~~i~~~----~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 ----DLEHAARAG----QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp ----HHHHHHHHH----TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred ----HHHHHHHhc----CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 245566666 9999999863 467999999999985
No 96
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=67.83 E-value=38 Score=27.78 Aligned_cols=137 Identities=11% Similarity=0.133 Sum_probs=77.4
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccce
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFY 358 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 358 (479)
++.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+-. -... -...++ |
T Consensus 3 ~~~V~Iimgs---~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR--~p~~~~~~~------------~~a~-~~g~~V--i 62 (163)
T 3ors_A 3 AMKVAVIMGS---SSDWKIMQESCNMLDYFEIPYEKQVVSAHR--TPKMMVQFA------------SEAR-ERGINI--I 62 (163)
T ss_dssp CCCEEEEESC---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHHHH------------HHTT-TTTCCE--E
T ss_pred CCeEEEEECc---HHHHHHHHHHHHHHHHcCCCEEEEEECCcC--CHHHHHHHH------------HHHH-hCCCcE--E
Confidence 4567777888 456777888999999998887555554332 343322110 0000 011334 7
Q ss_pred Eeccch----hHHHHHHHhCcceecccCccchh-hHH--HHHHHHhccee----e-eC--C-CCHHHHHHHHHHHhcCHH
Q 011687 359 LTHCGW----NSTMEAIQSGKRLLCYPVAGDQF-INC--AYIVKMWKIGI----R-VN--G-FGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 359 I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~-~nA--~rv~~~~Gvg~----~-~~--~-~~~~~i~~~i~~vl~~~~ 423 (479)
|.=+|. .++..++ .-+|+|.+|...... ... .-+.+ .--|+ . ++ + .+...++..|-.+ .|++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d~~ 139 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSI-QNPS 139 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TCTH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhC-CCHH
Confidence 776663 4444443 569999999865322 111 12333 22232 1 23 2 4445555544333 6899
Q ss_pred HHHHHHHHHHHHccc
Q 011687 424 MKHRLMNLYMRTMGD 438 (479)
Q Consensus 424 ~~~~a~~l~~~~~~~ 438 (479)
++++.+..++++++.
T Consensus 140 l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 140 LVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888763
No 97
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=67.79 E-value=3.9 Score=35.49 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh-CCCeEEEEcCCcccccccc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTS-RGFEPIVITPEFIHNQITS 55 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~-rGh~V~~~~~~~~~~~i~~ 55 (479)
+.+||++...|+.+-+. ...+++.|.+ +|++|.++.++...+.+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 45688888888877554 5899999998 8999999999876666643
No 98
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=67.26 E-value=36 Score=29.40 Aligned_cols=102 Identities=7% Similarity=0.008 Sum_probs=58.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCcc----ccccccCCCCCCCeEEEeCCC-CCCCCCCCCHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFI----HNQITSSMDPRSEISCMSIPD-GLEKNEPKDFFAI 83 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~-~l~~~~~~~~~~~ 83 (479)
|||+++..|..+ -+.+|.+.+.+. +|+|..+.+... .+...+ .|+.+..++. .+.. .
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~~~~~~~------r-- 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLIASAFDS------R-- 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECCGGGCSS------H--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeCcccccc------h--
Confidence 578888777664 366777777765 588876665421 123344 6887776542 1110 0
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||.-.+. .-...+-+.+...++-++++
T Consensus 65 -----~~~~~~~~~~l~~~----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -----EAYDRELIHEIDMY----APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -----HHHHHHHHHHHGGG----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----hhccHHHHHHHHhc----CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 11122334455555 99999987654 33444445555666666544
No 99
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.95 E-value=5.8 Score=33.83 Aligned_cols=43 Identities=19% Similarity=0.148 Sum_probs=35.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQIT 54 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~ 54 (479)
+||++...|+.|-+ =...+.+.|.++|++|.++.++.....+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 57888888888855 57899999999999999999987655554
No 100
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=65.95 E-value=4.9 Score=38.47 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=31.1
Q ss_pred CEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|+|+++.. |+-|-..-...+|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 67777765 5669999999999999999999999987
No 101
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=65.08 E-value=5.8 Score=33.58 Aligned_cols=43 Identities=14% Similarity=0.085 Sum_probs=33.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQIT 54 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~ 54 (479)
+||++...|+.+=+ =...+.+.|.++|++|.++.++...+.+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 46777666776665 57899999999999999999987655554
No 102
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=64.24 E-value=4.7 Score=32.77 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=26.6
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..++|+++.. |++. ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4578888843 5444 68899999999999999874
No 103
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=64.01 E-value=15 Score=32.05 Aligned_cols=104 Identities=9% Similarity=0.085 Sum_probs=58.6
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHh-CCCeEEEEcCCcc----ccccccCCCCCCCeEEEeCCC-CCCCCCCCCHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTS-RGFEPIVITPEFI----HNQITSSMDPRSEISCMSIPD-GLEKNEPKDFFA 82 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~-rGh~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~-~l~~~~~~~~~~ 82 (479)
+++||+++..|..+.+.. |.+...+ .+++|..+.+... .+..++ .|+.+..++. .++. ..
T Consensus 4 ~~~riavl~SG~Gsnl~a---ll~~~~~~~~~eI~~Vis~~~~a~~~~~A~~-----~gIp~~~~~~~~~~~-----r~- 69 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQA---IIGAIQKGLAIEIRAVISNRADAYGLKRAQQ-----ADIPTHIIPHEEFPS-----RT- 69 (215)
T ss_dssp CCEEEEEEESSCCHHHHH---HHHHHHTTCSEEEEEEEESCTTCHHHHHHHH-----TTCCEEECCGGGSSS-----HH-
T ss_pred CCcEEEEEEeCCcHHHHH---HHHHHHcCCCCEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCccccCc-----hh-
Confidence 368999988777665544 4444443 3688887776321 123444 6787776652 1110 00
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.....+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 70 -------~~d~~~~~~l~~~----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 70 -------DFESTLQKTIDHY----DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -------HHHHHHHHHHHTT----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------HhHHHHHHHHHhc----CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 1122344455555 99999987654 44444555555566666544
No 104
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=63.58 E-value=14 Score=34.20 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=25.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|||+|+..+..+- ...++|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 58999998886653 4457788899998777663
No 105
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=63.51 E-value=6 Score=34.26 Aligned_cols=40 Identities=13% Similarity=-0.036 Sum_probs=31.2
Q ss_pred CCCEEEEecCCCCCCHHH-HHHHHHHHHhCCCeEEEEcCCcc
Q 011687 9 KKNKILMVPYPAQGHVTP-MHKLASILTSRGFEPIVITPEFI 49 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p-~l~la~~L~~rGh~V~~~~~~~~ 49 (479)
+.+||++...|+ +..+- ...+.+.|.++|++|.++.++..
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 357888877776 44554 78999999999999999999764
No 106
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=62.74 E-value=42 Score=28.03 Aligned_cols=75 Identities=12% Similarity=0.074 Sum_probs=41.5
Q ss_pred EEeeeeh-HHhh-cccCccceEeccchhHHHH---HHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHH
Q 011687 340 VVPWAPQ-LKVL-QHNAVGFYLTHCGWNSTME---AIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDG 414 (479)
Q Consensus 340 ~~~~~pq-~~lL-~~~~~~~~I~HgG~~s~~e---al~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~ 414 (479)
+.+..+. ..++ ..++. .++--||.||.-| ++.+++|++++|.+. .....+.. .-.....---+++++.+.
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~-~~~~~i~~~~~~~e~~~~ 167 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTS-LDAGLVHVAADVAGAIAA 167 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHH-HCTTTEEEESSHHHHHHH
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCCh-hhcCeEEEcCCHHHHHHH
Confidence 3455554 2333 33443 4667788888665 467999999999842 11112222 111111112667777777
Q ss_pred HHHHh
Q 011687 415 LKKLK 419 (479)
Q Consensus 415 i~~vl 419 (479)
+.+.+
T Consensus 168 l~~~~ 172 (176)
T 2iz6_A 168 VKQLL 172 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76655
No 107
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=62.54 E-value=64 Score=26.74 Aligned_cols=136 Identities=22% Similarity=0.181 Sum_probs=76.3
Q ss_pred cEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceE
Q 011687 280 SVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYL 359 (479)
Q Consensus 280 ~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 359 (479)
+.|-|-+|| ..+....++....++.++..+-..+.+-++ .|+.+.+-. -... -...++ ||
T Consensus 13 ~~V~IimGS---~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR--~p~~~~~~~------------~~a~-~~g~~V--iI 72 (174)
T 3kuu_A 13 VKIAIVMGS---KSDWATMQFAADVLTTLNVPFHVEVVSAHR--TPDRLFSFA------------EQAE-ANGLHV--II 72 (174)
T ss_dssp CCEEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHHHHHH------------HHTT-TTTCSE--EE
T ss_pred CcEEEEECc---HHHHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHHHHHH------------HHHH-hCCCcE--EE
Confidence 457777888 456777888999999999887656554332 343322111 0000 012334 77
Q ss_pred eccch----hHHHHHHHhCcceecccCccc-hhhHHH--HHHHHh--cc--eee-eC--C-CCHHHHHHHHHHHhcCHHH
Q 011687 360 THCGW----NSTMEAIQSGKRLLCYPVAGD-QFINCA--YIVKMW--KI--GIR-VN--G-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 360 ~HgG~----~s~~eal~~GvP~l~~P~~~D-Q~~nA~--rv~~~~--Gv--g~~-~~--~-~~~~~i~~~i~~vl~~~~~ 424 (479)
.=+|. .++..+ ..-+|+|.+|...- -..... -+.+ . |+ +.. ++ + .+...++..|-. +.|+++
T Consensus 73 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l 149 (174)
T 3kuu_A 73 AGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTEL 149 (174)
T ss_dssp EEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred EECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHH
Confidence 77664 333333 34589999998642 212222 2333 2 33 221 22 1 344555555433 368999
Q ss_pred HHHHHHHHHHHccc
Q 011687 425 KHRLMNLYMRTMGD 438 (479)
Q Consensus 425 ~~~a~~l~~~~~~~ 438 (479)
+++.+..++++++.
T Consensus 150 ~~kl~~~r~~~~~~ 163 (174)
T 3kuu_A 150 AGRLAHWRQSQTDD 163 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888764
No 108
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=62.04 E-value=19 Score=33.87 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=55.8
Q ss_pred CCEEEEecCCCCC--C--HHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHH
Q 011687 10 KNKILMVPYPAQG--H--VTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEK 85 (479)
Q Consensus 10 ~~~i~~~~~~~~g--H--~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~ 85 (479)
+..|++.|..+.. . ..-+..+++.|.++|++|.+++++.-.+..++.... .+-....+..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-~~~~~~~l~g--------------- 248 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-METKPIVATG--------------- 248 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-CSSCCEECTT---------------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-cccccEEeeC---------------
Confidence 3456677655432 2 346889999999999999987765433322220000 0001111111
Q ss_pred HHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEc
Q 011687 86 VIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFW 135 (479)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~ 135 (479)
...+.++..-+. +.|++|+. ..+.+++|..+|+|.|.+.
T Consensus 249 ------~~sl~e~~ali~---~a~~~i~~--DsG~~HlAaa~g~P~v~lf 287 (349)
T 3tov_A 249 ------KFQLGPLAAAMN---RCNLLITN--DSGPMHVGISQGVPIVALY 287 (349)
T ss_dssp ------CCCHHHHHHHHH---TCSEEEEE--SSHHHHHHHTTTCCEEEEC
T ss_pred ------CCCHHHHHHHHH---hCCEEEEC--CCCHHHHHHhcCCCEEEEE
Confidence 011222222222 67899975 2356788999999999974
No 109
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=61.16 E-value=29 Score=30.27 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=31.2
Q ss_pred CEEEEecCC-CCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYP-AQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~-~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
-.+.+++.+ +.|=..-++.++..+..+|.+|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 355555554 88999999999999999999999997643
No 110
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=60.69 E-value=26 Score=31.21 Aligned_cols=35 Identities=11% Similarity=0.260 Sum_probs=25.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++. -+ -.++|+.|+++|++|.++...
T Consensus 27 ~~k~vlVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 27 QQKVVVITGASQ-GI--GAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp TCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 346677775543 22 358899999999999988754
No 111
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=60.61 E-value=16 Score=34.98 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=27.3
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.+||+++..+.. .+.+++++++.|++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 4589999877654 366999999999999999653
No 112
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=60.28 E-value=8.2 Score=35.01 Aligned_cols=51 Identities=10% Similarity=0.146 Sum_probs=37.8
Q ss_pred cCccceEeccchhHHHHHHHh------CcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhc
Q 011687 353 NAVGFYLTHCGWNSTMEAIQS------GKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKE 420 (479)
Q Consensus 353 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~ 420 (479)
+++ +|.=||=||+++++.. ++|++.+|.. . +| -+..+.++++.++++.+++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-------------~-lg-fl~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-------------H-LG-FYADWRPAEADKLVKLLAK 92 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-------------S-CC-SSCCBCGGGHHHHHHHHHT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-------------C-CC-cCCcCCHHHHHHHHHHHHc
Confidence 355 9999999999999875 8999999863 1 22 1223557888888888874
No 113
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=59.21 E-value=11 Score=33.95 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=34.3
Q ss_pred CCCEEEEecCC---CCCCHHHHHHHHHHHHhCCCeEEEEcCCcc
Q 011687 9 KKNKILMVPYP---AQGHVTPMHKLASILTSRGFEPIVITPEFI 49 (479)
Q Consensus 9 ~~~~i~~~~~~---~~gH~~p~l~la~~L~~rGh~V~~~~~~~~ 49 (479)
..||.+|++.| +-|-=.-..+|+..|..||++|+.+=-+.+
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 46899999976 457778888999999999999999876544
No 114
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=59.16 E-value=5.6 Score=31.66 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=25.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+++|+++.. |.+ -..+|+.|.++||+|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 467888765 433 4678999999999999988643
No 115
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=58.45 E-value=7.3 Score=35.55 Aligned_cols=32 Identities=22% Similarity=0.456 Sum_probs=24.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|||++. |+.|.+- ..|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 676654 5556554 4578999999999999875
No 116
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=58.44 E-value=30 Score=29.88 Aligned_cols=105 Identities=8% Similarity=0.055 Sum_probs=58.3
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCC--CeEEEEcCCc--c--ccccccCCCCCCCeEEEeCCCC-CCCCCCCCH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRG--FEPIVITPEF--I--HNQITSSMDPRSEISCMSIPDG-LEKNEPKDF 80 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rG--h~V~~~~~~~--~--~~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~ 80 (479)
|.++||+++..|+.+. +.+|.+.+.+.+ ++|..+.+.. . .+..++ .|+.+..++.. +..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~-----~gIp~~~~~~~~~~~------ 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEA-----AGIATQVFKRKDFAS------ 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCGGGSSS------
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHH-----cCCCEEEeCccccCC------
Confidence 3467898888777554 455566665443 6888777632 1 123344 67777765521 110
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 81 FAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
. ......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 71 r-------~~~d~~~~~~l~~~----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 K-------EAHEDAILAALDVL----KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp H-------HHHHHHHHHHHHHH----CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred H-------HHHHHHHHHHHHhc----CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 11223344566666 99999977654 33344444555556665444
No 117
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=58.12 E-value=77 Score=26.04 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=75.9
Q ss_pred cEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceE
Q 011687 280 SVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYL 359 (479)
Q Consensus 280 ~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I 359 (479)
|.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+- +. -+....++.||
T Consensus 6 p~V~IimgS---~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR--tp~~l~~~------------~~---~~~~~g~~ViI 65 (166)
T 3oow_A 6 VQVGVIMGS---KSDWSTMKECCDILDNLGIGYECEVVSAHR--TPDKMFDY------------AE---TAKERGLKVII 65 (166)
T ss_dssp EEEEEEESS---GGGHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHHHHH------------HH---HTTTTTCCEEE
T ss_pred CeEEEEECc---HHhHHHHHHHHHHHHHcCCCEEEEEEcCcC--CHHHHHHH------------HH---HHHhCCCcEEE
Confidence 567788888 455777888899999998876555544332 34332211 11 11111223388
Q ss_pred eccch----hHHHHHHHhCcceecccCccchh-hHH--HHHHHHh--cceeee---CC---CCHHHHHHHHHHHhcCHHH
Q 011687 360 THCGW----NSTMEAIQSGKRLLCYPVAGDQF-INC--AYIVKMW--KIGIRV---NG---FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 360 ~HgG~----~s~~eal~~GvP~l~~P~~~DQ~-~nA--~rv~~~~--Gvg~~~---~~---~~~~~i~~~i~~vl~~~~~ 424 (479)
.=+|. .++..+ ..-+|+|.+|...-.. ... .-+.+ . |+++.. ++ .+...++..|-. +.|+++
T Consensus 66 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~~l 142 (166)
T 3oow_A 66 AGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQ-HTDINI 142 (166)
T ss_dssp EEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGCHHH
T ss_pred EECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHH
Confidence 77664 333333 3468999999854321 111 12333 2 323222 21 344444444433 368999
Q ss_pred HHHHHHHHHHHccc
Q 011687 425 KHRLMNLYMRTMGD 438 (479)
Q Consensus 425 ~~~a~~l~~~~~~~ 438 (479)
+++.+..++++++.
T Consensus 143 ~~kl~~~r~~~~~~ 156 (166)
T 3oow_A 143 AKALAEFRAEQTRF 156 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888764
No 118
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=57.83 E-value=13 Score=31.88 Aligned_cols=30 Identities=3% Similarity=-0.030 Sum_probs=24.6
Q ss_pred ccCccceEeccchhHHHHHHHhCcceecccCcc
Q 011687 352 HNAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAG 384 (479)
Q Consensus 352 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 384 (479)
.+++ +|+.||........ .++|++-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3455 99999999988875 579999999865
No 119
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=57.52 E-value=62 Score=29.68 Aligned_cols=104 Identities=10% Similarity=0.132 Sum_probs=59.2
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCC--ccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHH
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPE--FIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIE 84 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~--~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~ 84 (479)
+++||+++..+. || -+.+|.....+- +.+|..+.+. ......++ .|+.+..+|.....+
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~-----~gIp~~~~~~~~~~r--------- 166 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW-----HDIPYYHVPVDPKDK--------- 166 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT-----TTCCEEECCCCSSCC---------
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH-----cCCCEEEcCCCcCCH---------
Confidence 478999888776 44 355666655432 4688877763 23344444 788888776321110
Q ss_pred HHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 85 KVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 85 ~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 167 ----~~~~~~~~~~l~~~----~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 167 ----EPAFAEVSRLVGHH----QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ----HHHHHHHHHHHHHT----TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ----HHHHHHHHHHHHHh----CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 01122344456666 99999987654 33334445555556665443
No 120
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=57.48 E-value=25 Score=31.45 Aligned_cols=35 Identities=23% Similarity=0.152 Sum_probs=27.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.-|+++++.++.| =-.++|+.|+++|.+|.+....
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~~ 42 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDIR 42 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 4689999977765 3468999999999999887653
No 121
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=57.37 E-value=80 Score=26.02 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=77.5
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccce
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFY 358 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 358 (479)
++.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+- +-... -...++ |
T Consensus 6 ~~~V~IimgS---~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR--~p~~~~~~------------~~~a~-~~g~~V--i 65 (169)
T 3trh_A 6 KIFVAILMGS---DSDLSTMETAFTELKSLGIPFEAHILSAHR--TPKETVEF------------VENAD-NRGCAV--F 65 (169)
T ss_dssp CCEEEEEESC---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHHHHH------------HHHHH-HTTEEE--E
T ss_pred CCcEEEEECc---HHhHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHHHHH------------HHHHH-hCCCcE--E
Confidence 4567788888 456777888999999999887656654332 33332211 11100 012334 7
Q ss_pred EeccchhHHHHH---HHhCcceecccCccchh-hHHHH--HHHH-hcce--e-eeC--C-CCHHHHHHHHHHHhcCHHHH
Q 011687 359 LTHCGWNSTMEA---IQSGKRLLCYPVAGDQF-INCAY--IVKM-WKIG--I-RVN--G-FGKRDIEDGLKKLKEDSEMK 425 (479)
Q Consensus 359 I~HgG~~s~~ea---l~~GvP~l~~P~~~DQ~-~nA~r--v~~~-~Gvg--~-~~~--~-~~~~~i~~~i~~vl~~~~~~ 425 (479)
|.=+|...-+-. -..-+|+|.+|...-.. ..... +.+. -|+. . .++ + .+...++..|-. +.|++++
T Consensus 66 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~~l~ 144 (169)
T 3trh_A 66 IAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQDKSIA 144 (169)
T ss_dssp EEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred EEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHHH
Confidence 877774332222 23458999999864222 22222 2330 1332 1 122 1 344455544433 3689999
Q ss_pred HHHHHHHHHHccc
Q 011687 426 HRLMNLYMRTMGD 438 (479)
Q Consensus 426 ~~a~~l~~~~~~~ 438 (479)
++.+..++++++.
T Consensus 145 ~kl~~~r~~~~~~ 157 (169)
T 3trh_A 145 QKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888874
No 122
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=56.55 E-value=12 Score=30.41 Aligned_cols=38 Identities=18% Similarity=0.307 Sum_probs=26.9
Q ss_pred CCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 6 CTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 6 ~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.....++|+++.. |.+- ..+++.|.++|++|+++....
T Consensus 15 ~~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred cccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 3445689998854 4333 567899999999999997643
No 123
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=56.52 E-value=20 Score=33.75 Aligned_cols=40 Identities=18% Similarity=0.132 Sum_probs=33.8
Q ss_pred CCCEEEEecC-CCCCCHHHHHHHHHHHH--hCCCeEEEEcCCc
Q 011687 9 KKNKILMVPY-PAQGHVTPMHKLASILT--SRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~-~~~gH~~p~l~la~~L~--~rGh~V~~~~~~~ 48 (479)
+.++|+|++. |+-|-..-..++|..|+ ++|++|.++..+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3567777765 77799999999999999 8999999999863
No 124
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=56.22 E-value=12 Score=29.63 Aligned_cols=39 Identities=23% Similarity=0.092 Sum_probs=30.3
Q ss_pred CCEEEEecC-C--CCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPY-P--AQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~-~--~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.+|++|+.. + +.......+.+|...++.||+|+++....
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 456666554 4 45778888899999999999999988854
No 125
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=55.97 E-value=14 Score=32.64 Aligned_cols=42 Identities=24% Similarity=0.333 Sum_probs=29.1
Q ss_pred CcccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 1 MVNMMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 1 ~~~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.+||.- ..|+++++.++.| =-.++|+.|+++|++|.+....
T Consensus 1 M~~~~~l--~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 1 MSQFMNL--EGKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp -CCTTCC--TTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCC--CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 5556543 3567777765542 2468899999999999887654
No 126
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=55.61 E-value=47 Score=30.73 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=53.9
Q ss_pred CEEEEecCCCCC---C--HHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCC---eEEEeCCCCCCCCCCCCHHH
Q 011687 11 NKILMVPYPAQG---H--VTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSE---ISCMSIPDGLEKNEPKDFFA 82 (479)
Q Consensus 11 ~~i~~~~~~~~g---H--~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g---~~~~~i~~~l~~~~~~~~~~ 82 (479)
..|++.|....+ . ..-+..+++.|.++|++|.+++++.-.+..++....... .....+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g------------ 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG------------ 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT------------
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccC------------
Confidence 456666644221 2 347889999999999999988765432222210000000 01111211
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeE
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGF 134 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~ 134 (479)
...+.++..-+. +.|++|+.. .+.+++|..+|+|.|.+
T Consensus 249 ---------~~sl~e~~ali~---~a~l~I~~D--sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 249 ---------ETQLDQAVILIA---ACKAIVTND--SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp ---------TSCHHHHHHHHH---TSSEEEEES--SHHHHHHHHTTCCEEEE
T ss_pred ---------cCCHHHHHHHHH---hCCEEEecC--CHHHHHHHHcCCCEEEE
Confidence 011222332222 678999753 45677899999999997
No 127
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.58 E-value=11 Score=31.02 Aligned_cols=39 Identities=23% Similarity=0.344 Sum_probs=35.1
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++.+|++.+.++-.|-....-++..|...|++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999998763
No 128
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=55.38 E-value=77 Score=25.52 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=56.5
Q ss_pred CCEEEEecCCCCC---CHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHH
Q 011687 10 KNKILMVPYPAQG---HVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKV 86 (479)
Q Consensus 10 ~~~i~~~~~~~~g---H~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~ 86 (479)
...++++++|+.+ ...-+..+++.|.+.++++.+++.....+.+. .++.+..+
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~------~~v~~~~~------------------ 75 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLG------LNTRLYKW------------------ 75 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCC------TTEEEESS------------------
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCC------CcEEEecC------------------
Confidence 3466778888776 45566778888887789998888753211111 24444311
Q ss_pred HHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcc
Q 011687 87 IENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWP 136 (479)
Q Consensus 87 ~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~ 136 (479)
... .+++.. ...|++|+.. ...+..=|-.+|+|.|.+..
T Consensus 76 ----~~~--~~~l~~----~~ad~~I~~~-G~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 76 ----IPQ--NDLLGH----PKTRAFITHG-GANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp ----CCH--HHHHTS----TTEEEEEECC-CHHHHHHHHHHTCCEEECCC
T ss_pred ----CCH--HHHhcC----CCcCEEEEcC-CccHHHHHHHcCCCEEeccc
Confidence 100 112211 2799999875 34556677789999999743
No 129
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=55.20 E-value=22 Score=30.88 Aligned_cols=98 Identities=9% Similarity=0.051 Sum_probs=56.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCc--c--ccccccCCCCCCCeEEEeCCCC-CCCCCCCCHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEF--I--HNQITSSMDPRSEISCMSIPDG-LEKNEPKDFFA 82 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~--~--~~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~~~ 82 (479)
++||+++..|+.+. +.+|.+.+.+. +++|..+.+.. . .+..++ .|+.+..++.. +.
T Consensus 8 ~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~-----~gIp~~~~~~~~~~--------- 70 (215)
T 3kcq_A 8 ELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQS-----YGIPTFVVKRKPLD--------- 70 (215)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCBTTBC---------
T ss_pred CCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcccCC---------
Confidence 57898888776554 44555666443 37888777632 1 112344 67777765421 10
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
...+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 71 ---------~~~~~~~L~~~----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 ---------IEHISTVLREH----DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ---------HHHHHHHHHHT----TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------hHHHHHHHHHh----CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 03344456666 99999977654 44444555555566666544
No 130
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=54.77 E-value=22 Score=35.67 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=25.6
Q ss_pred HHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeE
Q 011687 95 LERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGF 134 (479)
Q Consensus 95 l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~ 134 (479)
++++++.. +||++|... ....+|+++|||++.+
T Consensus 448 l~~~i~~~----~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 448 MEVVLEKL----KPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH----CCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHhc----CCCEEEccc---chhHHHHhcCCCEEEe
Confidence 45566666 999999874 2467899999999964
No 131
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=54.66 E-value=7.5 Score=36.43 Aligned_cols=47 Identities=17% Similarity=0.118 Sum_probs=34.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEE
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCM 66 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~ 66 (479)
.|||+|+-.|..| ..+|..|++.||+|+++..+...+.+.+ .|+...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~-----~g~~~~ 49 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT-----AGLRLT 49 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH-----TCEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH-----CCCEEe
Confidence 4899999777666 4578899999999999997533344444 566654
No 132
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=54.44 E-value=23 Score=30.21 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcchh
Q 011687 93 IHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWPAM 138 (479)
Q Consensus 93 ~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~~~ 138 (479)
...++.++++++. ++|+||.|. .+..+|+++|+|.+.+.++.
T Consensus 129 ~e~~~~i~~l~~~-G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKTE-NIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHHT-TCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHC-CCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 3456677776555 899999986 34789999999999987744
No 133
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=54.30 E-value=91 Score=28.27 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCc--cccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEF--IHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAI 83 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~--~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~ 83 (479)
.+++||+++..+.. | -+.+|.....+- ..+|..+.+.. .....++ .|+.++.+|.... +.
T Consensus 88 ~~~~ri~vl~Sg~g-~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~~~-----~r--- 151 (286)
T 3n0v_A 88 NHRPKVVIMVSKAD-H--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW-----HKIPYYHFALDPK-----DK--- 151 (286)
T ss_dssp TCCCEEEEEESSCC-H--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCBTT-----BH---
T ss_pred CCCcEEEEEEeCCC-C--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCCcC-----CH---
Confidence 45789998887764 3 445555555432 37888777632 2334445 7888887764221 10
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 152 -----~~~~~~~~~~l~~~----~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 152 -----PGQERKVLQVIEET----GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -----HHHHHHHHHHHHHH----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -----HHHHHHHHHHHHhc----CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 11223344566666 99999987654 44445555565566666544
No 134
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=53.28 E-value=21 Score=31.02 Aligned_cols=106 Identities=5% Similarity=-0.027 Sum_probs=55.5
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHh-CCCeEEEEcCCccc---cccccCCCCCCCeEEEeCCCCCCCCCCCCHHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTS-RGFEPIVITPEFIH---NQITSSMDPRSEISCMSIPDGLEKNEPKDFFAI 83 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~-rGh~V~~~~~~~~~---~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~ 83 (479)
+.++||+|+..|+.+.+..+ .+.+.+ .+++|..+.+.... +..++ .|+.+..++..-. .+ .
T Consensus 10 ~~~~ri~vl~SG~gsnl~al---l~~~~~~~~~eI~~Vis~~~a~~~~~A~~-----~gIp~~~~~~~~~----~~-r-- 74 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSL---LDAAVGDYPARVVAVGVDRECRAAEIAAE-----ASVPVFTVRLADH----PS-R-- 74 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHH---HHHSSTTCSEEEEEEEESSCCHHHHHHHH-----TTCCEEECCGGGS----SS-H--
T ss_pred CCCcEEEEEEeCChHHHHHH---HHHHhccCCCeEEEEEeCCchHHHHHHHH-----cCCCEEEeCcccc----cc-h--
Confidence 34679999988876554444 444432 34688777664321 22344 6777765531100 00 0
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 75 -----~~~d~~~~~~l~~~----~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 75 -----DAWDVAITAATAAH----EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp -----HHHHHHHHHHHHTT----CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred -----hhhhHHHHHHHHhh----CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 11123344455555 99999976544 33334444454455655443
No 135
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=53.27 E-value=99 Score=25.83 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=81.9
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGF 357 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 357 (479)
.-|.|-|-+|| ..+....++....++.++..+-..+.+-++ .|+.+.+-. -+.. =...++
T Consensus 12 ~~~~V~IimGS---~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~l~~~~------------~~a~-~~g~~V-- 71 (183)
T 1o4v_A 12 HVPRVGIIMGS---DSDLPVMKQAAEILEEFGIDYEITIVSAHR--TPDRMFEYA------------KNAE-ERGIEV-- 71 (183)
T ss_dssp --CEEEEEESC---GGGHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHHHHHH------------HHTT-TTTCCE--
T ss_pred CCCeEEEEecc---HHHHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHHHHHHH------------HHHH-hCCCcE--
Confidence 45688899998 456777888999999998886555544322 333322110 0000 011234
Q ss_pred eEeccch----hHHHHHHHhCcceecccCccc--hhhHHH-HHHHHh--cceee---eCC-CCHHHHHHHHHHHhcCHHH
Q 011687 358 YLTHCGW----NSTMEAIQSGKRLLCYPVAGD--QFINCA-YIVKMW--KIGIR---VNG-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 358 ~I~HgG~----~s~~eal~~GvP~l~~P~~~D--Q~~nA~-rv~~~~--Gvg~~---~~~-~~~~~i~~~i~~vl~~~~~ 424 (479)
||.=+|. .++..++ .-+|+|.+|.... .-..+. -+.+ . |+.+. +++ .++.-++..|- -+.|+++
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~~l 148 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKYPEI 148 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCCHHH
Confidence 7776663 4444444 6799999998652 222222 3566 5 64332 233 66666666664 3468999
Q ss_pred HHHHHHHHHHHccc
Q 011687 425 KHRLMNLYMRTMGD 438 (479)
Q Consensus 425 ~~~a~~l~~~~~~~ 438 (479)
+++.+..+++....
T Consensus 149 ~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 149 ARKVKEYKERMKRE 162 (183)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888774
No 136
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=52.62 E-value=18 Score=31.14 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=35.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 56899999999999999999999999999999998875
No 137
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=52.11 E-value=1.3e+02 Score=26.77 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=24.7
Q ss_pred CceEEE-eCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 107 RVACVV-VDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 107 ~~D~vi-~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.||+|| .|+.. .-+..=|.++|||.|.+..+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 688887 66644 56778889999999998665
No 138
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=51.89 E-value=17 Score=33.48 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=21.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+|+..|.. .....++|.++||+|..+.+.
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 68888865322 244567777889999877764
No 139
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=51.21 E-value=73 Score=27.38 Aligned_cols=102 Identities=5% Similarity=0.025 Sum_probs=55.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccc----cccccCCCCCCCeEEEeCCCC-CCCCCCCCHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIH----NQITSSMDPRSEISCMSIPDG-LEKNEPKDFFAI 83 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~----~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~~~~ 83 (479)
+||+++..|..+.+. +|.+.+.+. +++|..+.+.... +...+ .|+.+..++.. +.. .
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~~~~~------r-- 64 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVINHKLYKN------R-- 64 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGGGSSS------H--
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEECccccCc------h--
Confidence 478888877776544 444555544 7998877654321 22344 67776655421 110 0
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||+-.+. .-...+-+.+...++-++++
T Consensus 65 -----~~~~~~~~~~l~~~----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 -----VEFDSAIDLVLEEF----SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp -----HHHHHHHHHHHHHT----TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----hhhhHHHHHHHHhc----CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 11122244456566 99999976654 33334445555566666544
No 140
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=51.13 E-value=8.1 Score=35.86 Aligned_cols=129 Identities=11% Similarity=0.081 Sum_probs=69.7
Q ss_pred CCcEEEEEeCCccc---cCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEee--eeh-HHhhc
Q 011687 278 PNSVIYISFGSWVS---PIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPW--APQ-LKVLQ 351 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~---~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~--~pq-~~lL~ 351 (479)
+++.|.+.-|+ .. ..+.+.+.++++.+.+.++++++..++..+...-+.+.+.. +++.+.+- +.+ .++++
T Consensus 177 ~~~~i~l~pga-~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~---~~~~l~g~~sl~el~ali~ 252 (326)
T 2gt1_A 177 AGEYAVFLHAT-TRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGF---AYVEVLPKMSLEGVARVLA 252 (326)
T ss_dssp TTSEEEEECCC-SSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTC---TTEEECCCCCHHHHHHHHH
T ss_pred CCCEEEEEeCC-CCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhC---CcccccCCCCHHHHHHHHH
Confidence 34567777766 32 36667777777777655666544433221110111111111 23323221 223 55888
Q ss_pred ccCccceEec-cchhHHHHHHHhCcceecc--cCccchhhHHHHHHHHhcce-e-------eeCCCCHHHHHHHHHHHhc
Q 011687 352 HNAVGFYLTH-CGWNSTMEAIQSGKRLLCY--PVAGDQFINCAYIVKMWKIG-I-------RVNGFGKRDIEDGLKKLKE 420 (479)
Q Consensus 352 ~~~~~~~I~H-gG~~s~~eal~~GvP~l~~--P~~~DQ~~nA~rv~~~~Gvg-~-------~~~~~~~~~i~~~i~~vl~ 420 (479)
++++ +|+. .|. +.=|.+.|+|++++ |..... ++ = +|-. . -++.++++++.+++.++|+
T Consensus 253 ~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 253 GAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp TCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred hCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 9888 9998 444 33366699999988 432111 10 0 1111 1 1223899999999999985
Q ss_pred C
Q 011687 421 D 421 (479)
Q Consensus 421 ~ 421 (479)
+
T Consensus 322 ~ 322 (326)
T 2gt1_A 322 K 322 (326)
T ss_dssp T
T ss_pred H
Confidence 4
No 141
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=50.79 E-value=29 Score=34.37 Aligned_cols=90 Identities=10% Similarity=0.093 Sum_probs=51.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcccc----ccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHH
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHN----QITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEK 85 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~----~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~ 85 (479)
.+|++++..+ .+. ..+++.|.+-|-+|+.+++..... .+.+. .+.....+. + .+
T Consensus 332 GKrv~i~~~~--~~~---~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~----l~~~~~i~~-----d--~d------ 389 (483)
T 3pdi_A 332 GKRVLLYTGG--VKS---WSVVSALQDLGMKVVATGTKKSTEEDKARIREL----MGDDVKMLD-----E--GN------ 389 (483)
T ss_dssp TCEEEEECSS--SCH---HHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHH----SCSSCCBCC-----S--CS------
T ss_pred CCEEEEECCC--chH---HHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHh----cCCCCEEEe-----C--CC------
Confidence 4688886654 343 467777888999999887653211 11110 000000000 0 01
Q ss_pred HHHHhchHHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeE
Q 011687 86 VIENIMPIHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGF 134 (479)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~ 134 (479)
...+.+.+++. +||++|... -+..+|+++|||++.+
T Consensus 390 ------~~el~~~i~~~----~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ------ARVLLKTVDEY----QADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp ------HHHHHHHHHHT----TCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred ------HHHHHHHHHhc----CCCEEEECC---chhHHHHHcCCCEEEe
Confidence 11244455555 999999875 3457899999999875
No 142
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=50.29 E-value=10 Score=33.33 Aligned_cols=38 Identities=16% Similarity=0.053 Sum_probs=32.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|||+|..-|+-|=..-...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 67888666777999999999999999999999986643
No 143
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=50.20 E-value=17 Score=35.63 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=28.4
Q ss_pred CcccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 1 MVNMMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 1 ~~~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|.++|+ .+.+||+|+-.|..| .++|+.|+++||+|+..=.
T Consensus 1 m~~~~~-~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 1 MKTITT-FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp ---CCT-TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred Ccchhh-cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 554543 356899999887654 3469999999999999754
No 144
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=49.69 E-value=19 Score=31.61 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=34.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+++|++..-|+-|-..-++.+|..|+++|++|.++..+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 56888888899999999999999999999999887764
No 145
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=49.10 E-value=58 Score=30.43 Aligned_cols=34 Identities=9% Similarity=0.113 Sum_probs=26.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~ 78 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKT 78 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECC
Confidence 477777766653 3468899999999999988754
No 146
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=48.48 E-value=16 Score=32.11 Aligned_cols=36 Identities=8% Similarity=-0.025 Sum_probs=24.8
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
...|.++++.++.| =-.++++.|+++|++|+++...
T Consensus 5 ~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 5 GEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 34556666644432 3468899999999999987653
No 147
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=48.38 E-value=1.4e+02 Score=27.06 Aligned_cols=105 Identities=10% Similarity=0.100 Sum_probs=59.1
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCc---cccccccCCCCCCCeEEEeCCCCCCCCCCCCHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEF---IHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFA 82 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~---~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~ 82 (479)
.+++||+++..+..+ -+.+|.....+- ..+|.++.+.. ..+..+ ..|+.++.+|.... . .
T Consensus 87 ~~~~ri~vl~Sg~g~---nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~-----~~gIp~~~~~~~~~-----~-r- 151 (288)
T 3obi_A 87 ETRRKVMLLVSQSDH---CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD-----FGDIPFYHFPVNKD-----T-R- 151 (288)
T ss_dssp TSCEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT-----TTTCCEEECCCCTT-----T-H-
T ss_pred CCCcEEEEEEcCCCC---CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH-----HcCCCEEEeCCCcc-----c-H-
Confidence 347789888876643 344555555432 24777666532 222333 37888887764221 0 0
Q ss_pred HHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 83 IEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 152 ------~~~~~~~~~~l~~~----~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 152 ------RQQEAAITALIAQT----HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ------HHHHHHHHHHHHHH----TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ------HHHHHHHHHHHHhc----CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 11223344566666 99999987654 44445555565566666544
No 148
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=48.33 E-value=24 Score=31.61 Aligned_cols=39 Identities=10% Similarity=0.207 Sum_probs=35.4
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++.+|++.+.++-.|-....-++..|..+|++|.+++..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999988753
No 149
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=47.68 E-value=20 Score=32.25 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=25.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|++. |+ |.+ -..|++.|.++||+|+.++..
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4677776 34 643 457899999999999999864
No 150
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=47.58 E-value=17 Score=33.85 Aligned_cols=33 Identities=24% Similarity=0.208 Sum_probs=28.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.+||.|+-.|+.| +-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4799999998877 56799999999999998754
No 151
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=47.46 E-value=26 Score=31.78 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=23.7
Q ss_pred CCCCEEEEec-CCCCCCHHHH--HHHHHHHHhCCCeEEEE
Q 011687 8 KKKNKILMVP-YPAQGHVTPM--HKLASILTSRGFEPIVI 44 (479)
Q Consensus 8 ~~~~~i~~~~-~~~~gH~~p~--l~la~~L~~rGh~V~~~ 44 (479)
|+.|||+++- .|-..-++-. -.+++.|.+.||+|+++
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 3457777765 4544434433 35678888899999987
No 152
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=47.20 E-value=44 Score=26.37 Aligned_cols=50 Identities=8% Similarity=0.071 Sum_probs=35.5
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcCHHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~~~ 424 (479)
..+|+|++--..+ ........+ .|+--.+.+ ++.++|..+|+.++.....
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~~~~ 124 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEKRRL 124 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 4788888765544 444555666 687666666 9999999999999854443
No 153
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=46.84 E-value=26 Score=31.44 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=27.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+-|+++++.++.| =-.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4588889877664 246899999999999988765
No 154
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=46.52 E-value=1.7e+02 Score=26.50 Aligned_cols=108 Identities=7% Similarity=0.050 Sum_probs=60.9
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEK 85 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~ 85 (479)
.+++||+++..+..+ -+.+|.+....- ..+|..+.+..... +.+ .+...|+.++.+|.... .
T Consensus 86 ~~~~ri~vl~Sg~g~---nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~-~A~~~gIp~~~~~~~~~-----~------ 149 (287)
T 3nrb_A 86 TDRKKVVIMVSKFDH---CLGDLLYRHRLGELDMEVVGIISNHPRE-ALS-VSLVGDIPFHYLPVTPA-----T------ 149 (287)
T ss_dssp TCCCEEEEEECSCCH---HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCC-CCCCTTSCEEECCCCGG-----G------
T ss_pred CCCcEEEEEEeCCCc---CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHH-HHHHcCCCEEEEeccCc-----c------
Confidence 347899988877643 344555555433 36877777643110 222 23337888887763210 0
Q ss_pred HHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 86 VIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 150 --r~~~~~~~~~~l~~~----~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 150 --KAAQESQIKNIVTQS----QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp --HHHHHHHHHHHHHHH----TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred --hhhHHHHHHHHHHHh----CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 011223344566666 99999987655 44455556666666666544
No 155
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.44 E-value=19 Score=31.48 Aligned_cols=29 Identities=3% Similarity=0.007 Sum_probs=24.3
Q ss_pred cCccceEeccchhHHHHHHHhCcceecccCcc
Q 011687 353 NAVGFYLTHCGWNSTMEAIQSGKRLLCYPVAG 384 (479)
Q Consensus 353 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 384 (479)
+++ ||+.||........ .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999999998875 579999999853
No 156
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=46.29 E-value=13 Score=32.88 Aligned_cols=23 Identities=26% Similarity=0.274 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCc
Q 011687 26 PMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 26 p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
--.++|++|+++|++|+++..+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 44678999999999999999864
No 157
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=46.23 E-value=21 Score=32.96 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=34.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEe
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMS 67 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~ 67 (479)
|||+++-.|+.|- .+|..|++.||+|+++.... .+.+.+ .|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~-----~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAG-----NGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHH-----TCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHh-----CCCEEEc
Confidence 7899998888774 46788999999999999865 355655 6776654
No 158
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=46.01 E-value=20 Score=32.26 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=26.5
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|.++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3577777766654 3468999999999999888754
No 159
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=45.68 E-value=21 Score=34.89 Aligned_cols=40 Identities=18% Similarity=0.131 Sum_probs=34.4
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFI 49 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~ 49 (479)
..-+++...|+.|-..-++.+|...+.+|..|.|++.+..
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms 236 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMG 236 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 3457777789999999999999999989999999998753
No 160
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=45.61 E-value=16 Score=33.52 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=22.9
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECC
Confidence 55444 4445543 46889999999999998764
No 161
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=44.59 E-value=18 Score=32.44 Aligned_cols=52 Identities=13% Similarity=0.282 Sum_probs=38.4
Q ss_pred cCccceEeccchhHHHHHHHh---CcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhcC
Q 011687 353 NAVGFYLTHCGWNSTMEAIQS---GKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKED 421 (479)
Q Consensus 353 ~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~~ 421 (479)
+++ +|.=||=||+++++.. ++|+++++.. . + |..- .+.++++.++++.+++.
T Consensus 42 ~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~--Gfl~-~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-L--GFLT-SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-C--CSSC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-C--CccC-cCCHHHHHHHHHHHHcC
Confidence 455 9999999999999887 8898888743 1 2 2211 25688888888888743
No 162
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=44.58 E-value=1.2e+02 Score=27.65 Aligned_cols=105 Identities=9% Similarity=0.029 Sum_probs=61.5
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCc--cccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHH
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEF--IHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAI 83 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~--~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~ 83 (479)
.+++||+++..+. || -+.+|.....+- ..+|..+.+.. .....++ .|+.++.+|.... +..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~~~-----~r~-- 157 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQ-----HGLPFRHFPITAD-----TKA-- 157 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCCSS-----CHH--
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCCcC-----CHH--
Confidence 3478998888666 43 455555555432 36887777632 2334455 7888887774221 111
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.....+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 158 ------~~~~~~~~~l~~~----~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 158 ------QQEAQWLDVFETS----GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ------HHHHHHHHHHHHH----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ------HHHHHHHHHHHHh----CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 1123344566666 99999987654 44445555565566666544
No 163
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=44.31 E-value=15 Score=36.13 Aligned_cols=51 Identities=20% Similarity=0.200 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIP 69 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~ 69 (479)
.++|-+|++.. +=.-++.+|+.|.+.|+++. .| ....+.+.+ .|+.+..+.
T Consensus 8 ~~i~~aLISVs---DK~glvelAk~L~~lGfeI~-AT-gGTak~L~e-----~GI~v~~V~ 58 (523)
T 3zzm_A 8 RPIRRALISVY---DKTGLVDLAQGLSAAGVEII-ST-GSTAKTIAD-----TGIPVTPVE 58 (523)
T ss_dssp CCCCEEEEEES---SCTTHHHHHHHHHHTTCEEE-EC-HHHHHHHHT-----TTCCCEEHH
T ss_pred ccccEEEEEEe---ccccHHHHHHHHHHCCCEEE-Ec-chHHHHHHH-----cCCceeecc
Confidence 34555666653 34457899999999999875 33 344477777 788777664
No 164
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=44.06 E-value=51 Score=28.13 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=29.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++||+|+.+++.. ..-+....+.|.+.|++|++++..
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4689888887665 455566678899999999999985
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.98 E-value=16 Score=28.51 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=24.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|+++.. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 478888833 5553 36789999999999998764
No 166
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=43.67 E-value=37 Score=31.75 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=28.2
Q ss_pred CcccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHh--CCCeEEEEcC
Q 011687 1 MVNMMCTKKKNKILMVPYPAQGHVTPMHKLASILTS--RGFEPIVITP 46 (479)
Q Consensus 1 ~~~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~--rGh~V~~~~~ 46 (479)
|..|+..++.|+|++. |+.|-+ -..|++.|.+ +||+|+.+.-
T Consensus 1 M~~~~~~~~~~~vlVT--GatG~I--G~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 1 MRYIDDELENQTILIT--GGAGFV--GSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCSSSCCCTTCEEEEE--TTTSHH--HHHHHHHHHHHCTTSEEEEEEC
T ss_pred CcccchhcCCCEEEEE--CCCCHH--HHHHHHHHHhhCCCCeEEEEEC
Confidence 5555444556776655 344433 3478899999 9999999875
No 167
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=43.62 E-value=15 Score=34.49 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=25.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|||+++..|..| ..+|..|++.||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4899999766555 34788899999999998763
No 168
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.05 E-value=43 Score=28.61 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|+|++. |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 676655 4445443 578999999999999998754
No 169
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=42.98 E-value=1.2e+02 Score=30.19 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=23.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+|++++. .-.-..++++.|.+-|.+|+.+...
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 46777762 3355677888888899998887654
No 170
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=42.83 E-value=1.3e+02 Score=26.46 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=26.5
Q ss_pred CEEEEecCCCCCCH-HHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHV-TPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~-~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+++-..+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 68888887766555 45666777776667888877764
No 171
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=42.73 E-value=31 Score=26.97 Aligned_cols=38 Identities=13% Similarity=-0.048 Sum_probs=27.1
Q ss_pred CEEEEec-CCCC--CCHHHHHHHHHHHHhCCCeE-EEEcCCc
Q 011687 11 NKILMVP-YPAQ--GHVTPMHKLASILTSRGFEP-IVITPEF 48 (479)
Q Consensus 11 ~~i~~~~-~~~~--gH~~p~l~la~~L~~rGh~V-~~~~~~~ 48 (479)
||++|+- .+-+ ......+.+|..+.+.||+| .++....
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 3444444 3333 45677789999999999999 8888754
No 172
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=42.57 E-value=26 Score=32.39 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=28.1
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|.|+-.|..| ..+|+.|++.||+|+++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 45899999877777 56889999999999988654
No 173
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=42.56 E-value=27 Score=32.44 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=32.4
Q ss_pred CEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++|+|+.. |+-|-..-..++|..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46666654 677999999999999999999999999865
No 174
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=42.14 E-value=27 Score=31.27 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=26.1
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|..+|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 445678888765542 346899999999999988743
No 175
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=41.88 E-value=24 Score=28.78 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=28.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..+++++..|+. +.|++++++.|.++|.+|+++ ..
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~ 57 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HV 57 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 467887775553 899999999999999999999 53
No 176
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=41.41 E-value=64 Score=24.72 Aligned_cols=51 Identities=8% Similarity=-0.089 Sum_probs=32.3
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcCHHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~~~ 424 (479)
..+|+|++--..|.......+.. .|+--.+.+ ++.++|..+++.++.....
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~~~~ 122 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARMFTL 122 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 35777777555554444444445 356444444 9999999999999854333
No 177
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=41.32 E-value=49 Score=29.31 Aligned_cols=39 Identities=23% Similarity=0.118 Sum_probs=28.4
Q ss_pred CCEEEEecCCCC-----------CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQ-----------GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~-----------gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++||+++..... -...=+..-...|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 467888776531 225556677889999999999999853
No 178
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=41.18 E-value=26 Score=30.17 Aligned_cols=45 Identities=22% Similarity=0.144 Sum_probs=32.0
Q ss_pred hhhhhcCCCCCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEE
Q 011687 269 CIDWLDNQKPNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIW 314 (479)
Q Consensus 269 l~~~l~~~~~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw 314 (479)
+.+|+.....+.++||..+| ......+.+..+.++++++|+.+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As-~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTAS-TVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGG-GGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCC-CCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 44566434456799999887 4334456788899999999987643
No 179
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=40.68 E-value=30 Score=26.22 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=29.9
Q ss_pred CEEEEecCC---CCCCHHHHHHHHHHHHhC-CC-eEEEEcCCcccccc
Q 011687 11 NKILMVPYP---AQGHVTPMHKLASILTSR-GF-EPIVITPEFIHNQI 53 (479)
Q Consensus 11 ~~i~~~~~~---~~gH~~p~l~la~~L~~r-Gh-~V~~~~~~~~~~~i 53 (479)
||++|+-.. +.......+.+|..+.+. || +|+++....-...+
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 355555443 345567789999999999 99 99999886533333
No 180
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=40.55 E-value=1e+02 Score=28.18 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++. - =-.++|+.|+++|++|.++..
T Consensus 27 gk~vlVTGas~-G--IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGG-G--IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 46777775554 2 346899999999999998864
No 181
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=40.54 E-value=34 Score=29.65 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=35.3
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++.+|++.+.++-.|-....-++..|..+|++|.+++..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 357999999999999999999999999999999999874
No 182
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=40.49 E-value=21 Score=31.86 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=32.6
Q ss_pred CCEEEEecCC---CCCCHHHHHHHHHHHHhCCCeEEEEcCCcc
Q 011687 10 KNKILMVPYP---AQGHVTPMHKLASILTSRGFEPIVITPEFI 49 (479)
Q Consensus 10 ~~~i~~~~~~---~~gH~~p~l~la~~L~~rGh~V~~~~~~~~ 49 (479)
+||.+|++.| +-|-=.-..+|+..|..||++|+.+=-+.+
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 6899999976 446677888999999999999998765443
No 183
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=40.24 E-value=41 Score=30.17 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=24.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++ |- =-.++|+.|+++|++|+++...
T Consensus 29 ~k~vlVTGas-~g--IG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 29 GRIALVTGGS-RG--IGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3566666444 32 3457899999999999988753
No 184
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=40.00 E-value=19 Score=32.89 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=27.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 57999998777664 6789999999999988653
No 185
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=39.86 E-value=18 Score=33.02 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=24.4
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 7 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 4666654 4445443 47899999999999999764
No 186
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=39.75 E-value=42 Score=29.66 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=27.5
Q ss_pred CEEEEecCCCCC-----------CHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQG-----------HVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~g-----------H~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+||+++.....+ ...=+......|.+.|++|+++++..
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 678877765321 23456677889999999999999853
No 187
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=39.72 E-value=15 Score=28.85 Aligned_cols=33 Identities=12% Similarity=0.260 Sum_probs=24.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.++|+++.. |.+. ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 356777754 4333 46789999999999988764
No 188
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=39.63 E-value=31 Score=31.18 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=29.4
Q ss_pred EEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 12 KILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 12 ~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.|+|.. -|+-|-..-...||..|+++|++|.++=.+.
T Consensus 6 vI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 6 VIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp EEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 344443 3677999999999999999999999986644
No 189
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=39.18 E-value=12 Score=34.90 Aligned_cols=40 Identities=13% Similarity=0.146 Sum_probs=20.5
Q ss_pred cccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 2 VNMMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 2 ~~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+|..++.|+|++. |+.|.+- ..|++.|.++|+++.+++
T Consensus 16 ~n~~~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 16 ENLYFQSNAMNILVT--GGAGFIG--SNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --------CEEEEEE--TTTSHHH--HHHHHHHHHHCTTEEEEE
T ss_pred cccccccCCCeEEEE--CCccHHH--HHHHHHHHhhCCCcEEEE
Confidence 456555556776654 4445443 478899999995444443
No 190
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.14 E-value=21 Score=33.09 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=34.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEe
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMS 67 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~ 67 (479)
|||+++-.|+.|- .+|..|++.||+|+++..... +.+.+ .|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~~-----~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVKA-----KGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHHH-----HCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHHh-----CCcEEee
Confidence 7999997777664 567889999999999998653 55555 5666554
No 191
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=39.10 E-value=94 Score=27.67 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=25.3
Q ss_pred CEEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.|+++++.++. +-+ -.++|+.|+++|++|.++....
T Consensus 26 ~k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCch
Confidence 46677775432 223 3679999999999999887643
No 192
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=39.07 E-value=1.3e+02 Score=26.99 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCC---eEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGF---EPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh---~V~~~~~~ 47 (479)
.|+|.|+-.|..| ..+++.|.+.|| +|++....
T Consensus 3 ~~~I~iIG~G~mG-----~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMA-----RNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHH-----HHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHH-----HHHHHHHHHCCCCCCeEEEEeCC
Confidence 4789998765444 467889999999 99988754
No 193
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=39.04 E-value=15 Score=33.66 Aligned_cols=34 Identities=12% Similarity=0.012 Sum_probs=26.6
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+|.|+-.|..| ..+|..|++.||+|++....
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 35899999766555 46889999999999998653
No 194
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=38.97 E-value=30 Score=31.88 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=27.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+|+|+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4789998866 56789999999999999998864
No 195
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=38.76 E-value=1.6e+02 Score=25.27 Aligned_cols=102 Identities=7% Similarity=0.068 Sum_probs=56.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC--CCeEEEEcCCcc----ccccccCCCCCCCeEEEeCCCC-CCCCCCCCHHHH
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR--GFEPIVITPEFI----HNQITSSMDPRSEISCMSIPDG-LEKNEPKDFFAI 83 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r--Gh~V~~~~~~~~----~~~i~~~~~~~~g~~~~~i~~~-l~~~~~~~~~~~ 83 (479)
+||+++..|..+ -+.+|.+...+. ..+|.++.+... .+..++ .|+.+..++.. +..
T Consensus 3 ~riavl~Sg~Gs---nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~-----~gIp~~~~~~~~~~~--------- 65 (211)
T 3p9x_A 3 KRVAIFASGSGT---NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKV-----HEIPVCALDPKTYPS--------- 65 (211)
T ss_dssp CEEEEECCTTCH---HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT-----TTCCEEECCGGGSSS---------
T ss_pred CEEEEEEeCCch---HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH-----cCCCEEEeChhhcCc---------
Confidence 789888877653 366666666433 257877776421 123334 67777655421 110
Q ss_pred HHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 84 EKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.......+.+.++++ ++|+||+-.+. .-...+-+.+...++-++++
T Consensus 66 ----r~~~d~~~~~~l~~~----~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 66 ----KEAYEIEVVQQLKEK----QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp ----HHHHHHHHHHHHHHT----TCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----hhhhHHHHHHHHHhc----CCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 011123344456666 99999987654 33344445555556665444
No 196
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=38.48 E-value=34 Score=31.43 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=26.8
Q ss_pred ccCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 3 NMMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 3 ~~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|...++.|+|++. |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 4 ~~~~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 4 DNAVLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCSSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CcccCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34333445666554 4445443 56889999999999988753
No 197
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.35 E-value=20 Score=32.79 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=25.7
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|||+|+..|..| ..+|..|.+.||+|+++...
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 3799998766555 46788999999999998763
No 198
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.30 E-value=48 Score=30.15 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=24.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. - =-.++|+.|+++|++|.++.-.
T Consensus 31 gk~vlVTGas~-g--IG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 31 GRAAVVTGGAS-G--IGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEECC
Confidence 35666665543 2 3468899999999999888754
No 199
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=38.25 E-value=19 Score=33.44 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=26.6
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.++.++|.|+-.|..| .++|..|+++||+|++.-..
T Consensus 3 ~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3456899999776655 47889999999999998764
No 200
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=38.11 E-value=59 Score=28.54 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=27.7
Q ss_pred CEEEEecCCC-----------CCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPA-----------QGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~-----------~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+||+|+.... .-...=+....+.|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5777777542 1244566777888999999999999854
No 201
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=38.10 E-value=27 Score=27.16 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=20.2
Q ss_pred CceEEEeCCCccc--HHHHHHH---hCCCcEeE
Q 011687 107 RVACVVVDLLASS--AIGVACR---CGVPAAGF 134 (479)
Q Consensus 107 ~~D~vi~D~~~~~--~~~~A~~---lgiP~v~~ 134 (479)
+||+||.|...+. |..+++. .++|+|.+
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 8999999986643 5555543 47887775
No 202
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=37.84 E-value=33 Score=28.28 Aligned_cols=39 Identities=13% Similarity=0.215 Sum_probs=31.0
Q ss_pred CCEEEEecC-C--CCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPY-P--AQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~-~--~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++|. | -.--.++...|++.|.++|.+|.|..++-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 478888884 2 11345788999999999999999999975
No 203
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=37.79 E-value=35 Score=29.83 Aligned_cols=36 Identities=11% Similarity=0.153 Sum_probs=29.2
Q ss_pred CCEEEEecC--CCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 10 KNKILMVPY--PAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 10 ~~~i~~~~~--~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
+|+.+|++. ++-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 466666553 355999999999999999999999974
No 204
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=37.65 E-value=62 Score=26.95 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=30.7
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++.+||+|+.+++.. ..-+....+.|.+.|++|+++++..
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 346899999887665 3455667788989999999999753
No 205
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=37.40 E-value=1.2e+02 Score=29.44 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=25.5
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~ 47 (479)
.++|+|+++..++ ....++..|+++ |++++++.+.
T Consensus 19 ~~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~~ 54 (451)
T 2yrx_A 19 QSHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAPG 54 (451)
T ss_dssp CSSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEEC
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 3468999988763 467788888764 8988777653
No 206
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=37.27 E-value=18 Score=33.53 Aligned_cols=38 Identities=8% Similarity=0.093 Sum_probs=28.1
Q ss_pred CE-EEEecCCCCCCH--------------HHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NK-ILMVPYPAQGHV--------------TPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~-i~~~~~~~~gH~--------------~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+| |++...|+.=.+ ..-.++|+++.++|++|+++..+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45 555556665554 256689999999999999999754
No 207
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.25 E-value=17 Score=33.68 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=32.4
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEE
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCM 66 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~ 66 (479)
.|||+|+..|+.| ..+|..|++.||+|+++..+...+.+.+ .|+...
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~-----~g~~~~ 65 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA-----TGLRLE 65 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH-----HCEEEE
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh-----CCeEEE
Confidence 6899999877766 4578889999999999944333344444 455543
No 208
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=37.18 E-value=1.8e+02 Score=28.82 Aligned_cols=34 Identities=24% Similarity=0.197 Sum_probs=24.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.+|++++. .-.-.++|++.|.+.|.+|..+....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 46777773 34556788888889999988766543
No 209
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=37.11 E-value=32 Score=26.50 Aligned_cols=38 Identities=16% Similarity=0.036 Sum_probs=28.0
Q ss_pred CEEEEecCCCC-CCH-HHHHHHHHHHHhCC--CeEEEEcCCc
Q 011687 11 NKILMVPYPAQ-GHV-TPMHKLASILTSRG--FEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~-gH~-~p~l~la~~L~~rG--h~V~~~~~~~ 48 (479)
||++|+-..+. -.. +-.+..|....++| |+|.++.-..
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 78777776543 222 34678899999999 8999998864
No 210
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=37.06 E-value=20 Score=34.03 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
|||+|+-.|-.| +.+|..|+++|++|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 789998765334 788899999999999984
No 211
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=36.93 E-value=81 Score=24.58 Aligned_cols=52 Identities=12% Similarity=-0.018 Sum_probs=33.7
Q ss_pred hCcceecccCccchhhHHHHHHHHhc-ceeeeCC-CCHHHHHHHHHHHhcCHHHHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWK-IGIRVNG-FGKRDIEDGLKKLKEDSEMKH 426 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~G-vg~~~~~-~~~~~i~~~i~~vl~~~~~~~ 426 (479)
..+|+|++--..|... .....+ .| +--.+.+ ++.++|.++|+.+++...+..
T Consensus 75 ~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~~~~~~ 128 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTT-AMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQYDLVT 128 (151)
T ss_dssp SSCEEEEEECGGGHHH-HHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHH-HHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4677777765544433 334445 57 6444544 999999999999996554433
No 212
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.69 E-value=22 Score=28.09 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=27.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+.+|+++.+|..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 5688888765444 478999999999999999854
No 213
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.52 E-value=33 Score=30.55 Aligned_cols=33 Identities=9% Similarity=0.053 Sum_probs=25.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 467777766654 346899999999999998753
No 214
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=36.29 E-value=29 Score=31.92 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=28.9
Q ss_pred CCEEEEecCCCCC-C---HHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQG-H---VTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~g-H---~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++||+++..|-.+ | +.....++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688888765332 2 346789999999999999999854
No 215
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=36.25 E-value=17 Score=33.53 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=26.0
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCC-eEEEEcC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGF-EPIVITP 46 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh-~V~~~~~ 46 (479)
..|+|.|+-.|..| ..+|+.|++.|| +|++...
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 46899999776555 478999999999 9998876
No 216
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.70 E-value=63 Score=28.71 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=27.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+-|+++++.++.| =-.++|+.|+++|.+|.++...
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 3578888877765 3578999999999999887653
No 217
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=35.35 E-value=27 Score=31.58 Aligned_cols=33 Identities=6% Similarity=0.115 Sum_probs=25.3
Q ss_pred CCEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|+|+.. |..| ..+|+.|.+.||+|+++...
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 369999876 5545 46788899999999977653
No 218
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=35.34 E-value=49 Score=28.27 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=32.2
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIP 69 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~ 69 (479)
..|+|.|+-.|..| ..+|..|+++||+|+++.... +.+.+ ..+-+..+|
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~~--~~~~~-----aD~vi~av~ 66 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSKD--QATTL-----GEIVIMAVP 66 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTTC--CCSSC-----CSEEEECSC
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCCH--HHhcc-----CCEEEEcCC
Confidence 35889998765545 567889999999999986542 22332 455565554
No 219
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=35.25 E-value=31 Score=30.50 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=29.3
Q ss_pred CEEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|.. -|+-|-..-...||..|+++|++|.++=.+
T Consensus 7 ~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 7 RRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 3454543 356689999999999999999999998654
No 220
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=35.02 E-value=38 Score=30.53 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=23.8
Q ss_pred cCCCCCCCEEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 4 MMCTKKKNKILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 4 ~~~~~~~~~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
||.+...++|+++. .|.- =..-+-.+...++++|++|++++-
T Consensus 1 ~~~~~~~~rvLvv~aHPDD-e~l~~GGtia~~~~~G~~V~vv~~ 43 (270)
T 3dfi_A 1 MLQDADRTRILAISPHLDD-AVLSVGASLAQAEQDGGKVTVFTV 43 (270)
T ss_dssp -----CCSEEEEEESSTTH-HHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCCEEEEEeCCch-HHHhhHHHHHHHHhCCCeEEEEEE
Confidence 34443445665555 4432 234555666677789999999874
No 221
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=34.86 E-value=21 Score=32.80 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=26.6
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+|.|+-.|..| ..+|+.|++.||+|++.-..
T Consensus 8 ~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 35799999766555 36889999999999988553
No 222
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=34.78 E-value=16 Score=33.58 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=25.7
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhC-----C-CeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSR-----G-FEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~r-----G-h~V~~~~~ 46 (479)
+|||+|+-.|..|. .+|..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 57999997776663 567888888 9 99999976
No 223
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=34.74 E-value=1.8e+02 Score=27.92 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=76.6
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhccc-Ccc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHN-AVG 356 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~-~~~ 356 (479)
..+.|-|-+|| ..+....+.....++.+|..+-.-+.+-+. .|+...+- +-+..- ... ++
T Consensus 264 ~~~~V~Ii~gs---~SD~~~~~~a~~~l~~~gi~~~v~V~saHR--~p~~~~~~------------~~~~~~-~g~~~v- 324 (425)
T 2h31_A 264 SQCRVVVLMGS---TSDLGHCEKIKKACGNFGIPCELRVTSAHK--GPDETLRI------------KAEYEG-DGIPTV- 324 (425)
T ss_dssp CCCEEEEEESC---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHHHHH------------HHHHHT-TCCCEE-
T ss_pred CCCeEEEEecC---cccHHHHHHHHHHHHHcCCceEEeeeeccC--CHHHHHHH------------HHHHHH-CCCCeE-
Confidence 44678888888 456777888899999999887555544332 33332110 010000 012 24
Q ss_pred ceEeccch----hHHHHHHHhCcceecccCccchhhHHHHHHHHhc--ceeee---CC-CCHHHHHHHHHHHhcCHHHHH
Q 011687 357 FYLTHCGW----NSTMEAIQSGKRLLCYPVAGDQFINCAYIVKMWK--IGIRV---NG-FGKRDIEDGLKKLKEDSEMKH 426 (479)
Q Consensus 357 ~~I~HgG~----~s~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~G--vg~~~---~~-~~~~~i~~~i~~vl~~~~~~~ 426 (479)
+|.=+|. .++..++ .-+|+|.+|....--.....+.- +. -|+.+ .. .++.-++..|- -+.++++++
T Consensus 325 -iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~-vqmp~g~pvatv~~~~nAa~~A~~Il-~~~~~~l~~ 400 (425)
T 2h31_A 325 -FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSS-LRLPSGLGCSTVLSPEGSAQFAAQIF-GLSNHLVWS 400 (425)
T ss_dssp -EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGT-SSCCSSCCCEECCCHHHHHHHHHHHH-HTTCHHHHH
T ss_pred -EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHH-hcCCCCCceEEecCchHHHHHHHHHH-ccCCHHHHH
Confidence 6666663 4455444 57999999985322222222211 22 22222 22 55555555554 346899999
Q ss_pred HHHHHHHHHcc
Q 011687 427 RLMNLYMRTMG 437 (479)
Q Consensus 427 ~a~~l~~~~~~ 437 (479)
+.+..+.....
T Consensus 401 kl~~~~~~~~~ 411 (425)
T 2h31_A 401 KLRASILNTWI 411 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877765
No 224
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=34.62 E-value=42 Score=26.67 Aligned_cols=35 Identities=14% Similarity=0.094 Sum_probs=28.7
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..+++++..|+ =+.|++++++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 46777776554 4899999999999999999999 53
No 225
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=34.53 E-value=50 Score=29.16 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=23.2
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |-+ -.++++.|+++|++|+++...
T Consensus 13 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 13 RKAIVTGGS-KGI--GAAIARALDKAGATVAIADLD 45 (263)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455666443 333 357899999999999988653
No 226
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=33.99 E-value=52 Score=29.23 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=25.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 9 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 9 KGKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777765543 2467899999999999988754
No 227
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=33.98 E-value=30 Score=31.30 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=25.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.++|+|+-.|..| ..+|..|+++||+|+++...
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4789999655544 46899999999999997654
No 228
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=33.74 E-value=74 Score=23.87 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=27.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
++||++++..|.|=-.-.-.+-+.+.++|.++.+...
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4688888876665445566888888899998765544
No 229
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=33.67 E-value=12 Score=34.35 Aligned_cols=33 Identities=15% Similarity=-0.081 Sum_probs=25.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 4578887765434 67888899999999999875
No 230
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=33.58 E-value=49 Score=29.17 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=25.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.+|.++++.++. -+ -.++|+.|+++|++|.++..
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 467778875554 22 36899999999999998854
No 231
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=33.48 E-value=35 Score=32.35 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=28.3
Q ss_pred CCEEEEecCCCCC-C---HHHHHHHHHHH-HhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQG-H---VTPMHKLASIL-TSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~g-H---~~p~l~la~~L-~~rGh~V~~~~~ 46 (479)
+|||+++..|-.+ | +.....++++| .++||+|+.+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 6889988765444 3 33568899999 999999998854
No 232
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=33.46 E-value=45 Score=29.87 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 466777755542 3468999999999999988743
No 233
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=33.26 E-value=33 Score=32.22 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=33.2
Q ss_pred CCEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.++|+|+.. |+-|-..-..++|..|+++|++|.++..+.
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 456666664 677999999999999999999999999865
No 234
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=33.19 E-value=40 Score=32.20 Aligned_cols=59 Identities=10% Similarity=0.282 Sum_probs=39.8
Q ss_pred ehHHhhcccCccceEeccchhHHHHHHHh----Cc-ceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHh
Q 011687 345 PQLKVLQHNAVGFYLTHCGWNSTMEAIQS----GK-RLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLK 419 (479)
Q Consensus 345 pq~~lL~~~~~~~~I~HgG~~s~~eal~~----Gv-P~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl 419 (479)
+..++-..+++ +|+=||=||++.|+.. ++ |+|.+... . + |.. ..++.+++.+++++++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-l--GFL-t~~~~~~~~~al~~il 169 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-L--GFL-SPFDFKEHKKVFQEVI 169 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-C--CSS-CCEEGGGHHHHHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-c--ccC-CcCChHHHHHHHHHHh
Confidence 34455556777 9999999999999754 56 78887642 1 2 211 1245677888888877
Q ss_pred c
Q 011687 420 E 420 (479)
Q Consensus 420 ~ 420 (479)
+
T Consensus 170 ~ 170 (388)
T 3afo_A 170 S 170 (388)
T ss_dssp T
T ss_pred c
Confidence 4
No 235
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=33.08 E-value=34 Score=29.17 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=24.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|||++. |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 565444 4445443 578999999999999998643
No 236
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=33.03 E-value=45 Score=30.33 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=31.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+.|+|..-|+-|=..-...||..|+++|++|.++=.+
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34566665567799999999999999999999998654
No 237
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.98 E-value=35 Score=29.00 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=24.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|||++. |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 565544 4445443 578999999999999998643
No 238
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=32.96 E-value=40 Score=29.89 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=30.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|.|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 4566655577799999999999999999999988554
No 239
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.92 E-value=1e+02 Score=23.37 Aligned_cols=48 Identities=2% Similarity=-0.087 Sum_probs=33.9
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcC
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKED 421 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~ 421 (479)
..+|+|++--..+.........+ .|+--.+.+ ++.++|..+|+++++.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 37788877665554433324556 677667766 9999999999999844
No 240
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.86 E-value=54 Score=27.83 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=25.9
Q ss_pred CCCEEEEecCCCCCCHHHHH-HHHHHHHhCCCeEEEEcC
Q 011687 9 KKNKILMVPYPAQGHVTPMH-KLASILTSRGFEPIVITP 46 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l-~la~~L~~rGh~V~~~~~ 46 (479)
++|||+++-....|+..-+. .+++.|.+.|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 35788777765577765554 346667778999887754
No 241
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=32.66 E-value=49 Score=29.19 Aligned_cols=34 Identities=12% Similarity=-0.039 Sum_probs=23.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. - --.++|+.|+++|++|+++...
T Consensus 9 ~k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 9 GCTALVTGGSR-G--IGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TCEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35566664443 2 2457899999999999988653
No 242
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.37 E-value=81 Score=22.09 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=34.3
Q ss_pred HhCcceecccCccchhhHHHH---HHHHhcceeeeCC-CCHHHHHHHHHHHh
Q 011687 372 QSGKRLLCYPVAGDQFINCAY---IVKMWKIGIRVNG-FGKRDIEDGLKKLK 419 (479)
Q Consensus 372 ~~GvP~l~~P~~~DQ~~nA~r---v~~~~Gvg~~~~~-~~~~~i~~~i~~vl 419 (479)
-+|+|++++-..+.|.+.-.. ..+ -|+...+-+ .+++++.+.+++.|
T Consensus 49 dngkplvvfvngasqndvnefqneakk-egvsydvlkstdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKK-EGVSYDVLKSTDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHH-HTCEEEEEECCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHh-cCcchhhhccCCHHHHHHHHHHHH
Confidence 368999888887777654432 345 477776655 88999999888876
No 243
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.36 E-value=15 Score=31.68 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|||+++..| . --..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~G---~--~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGE---T--TAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCH---H--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCC---H--HHHHHHHHHHhCCCeEEEEECCH
Confidence 567777643 2 24578999999999999998753
No 244
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=32.32 E-value=41 Score=30.10 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=25.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
..|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 30 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 30 AGKTAFVTGGSRG---IGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777765542 346899999999999998854
No 245
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=32.15 E-value=55 Score=27.41 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=25.7
Q ss_pred CEEEEecCCCCCCHHHHH-HHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMH-KLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l-~la~~L~~rGh~V~~~~~~ 47 (479)
|||+++-..-.|+..-+. .+++.|.+.|++|.++--.
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 677777655567765554 4567777789999887653
No 246
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=32.15 E-value=43 Score=24.95 Aligned_cols=46 Identities=7% Similarity=-0.099 Sum_probs=34.4
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcC
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKED 421 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~ 421 (479)
..+|+|++ ..+.........+ .|+--.+.+ ++.++|.+.++.++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 47899988 4445555666667 787666666 9999999999988753
No 247
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=32.09 E-value=64 Score=29.21 Aligned_cols=35 Identities=14% Similarity=0.053 Sum_probs=25.1
Q ss_pred CEEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++. +-+ -.++|+.|+++|++|.++...
T Consensus 30 ~k~vlVTGasg~~GI--G~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSL--AWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46677776543 233 357999999999999887654
No 248
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=32.00 E-value=39 Score=34.87 Aligned_cols=95 Identities=11% Similarity=0.017 Sum_probs=52.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccc-----------cccccCCCCCCCeEEEeCCCCCCCCCCCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIH-----------NQITSSMDPRSEISCMSIPDGLEKNEPKD 79 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~-----------~~i~~~~~~~~g~~~~~i~~~l~~~~~~~ 79 (479)
|||+|+..+..| ....++|.++||+|..+.+.... +...+ .|+.+..... ..
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~-----~~ip~~~~~~-~~------ 63 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE-----RGIPVYAPDN-VN------ 63 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHH-----HTCCEECCSC-TT------
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHH-----cCCCEeccCC-CC------
Confidence 678888755432 23356677779999877764311 11122 3444432210 00
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc-ccHHHHHHHhCCCcEeEcchh
Q 011687 80 FFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA-SSAIGVACRCGVPAAGFWPAM 138 (479)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 138 (479)
...+.+.++++ ++|+||+-.+. .-...+-+.....++-++++.
T Consensus 64 ------------~~~~~~~l~~~----~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 64 ------------HPLWVERIAQL----SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp ------------SHHHHHHHHHH----CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred ------------cHHHHHHHHhc----CCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 01233456666 89999976654 444445555566678887774
No 249
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=31.99 E-value=2.1e+02 Score=23.36 Aligned_cols=101 Identities=8% Similarity=-0.038 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEee-eehHHhhcccCccceEeccchhHHHHHH
Q 011687 293 IGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPW-APQLKVLQHNAVGFYLTHCGWNSTMEAI 371 (479)
Q Consensus 293 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~-~pq~~lL~~~~~~~~I~HgG~~s~~eal 371 (479)
..+.....+...++..|+.++....+.. .+.. . .++.++++ +|..+ |.+.+.+
T Consensus 20 d~~~~~~~l~~~L~~~g~~v~~~~~~~~--al~~------~--~dlvl~D~~mp~~~----------------g~l~~~~ 73 (196)
T 1qo0_D 20 PPGEVSDALVLQLIRIGCSVRQCWPPPE--AFDV------P--VDVVFTSIFQNRHH----------------DEIAALL 73 (196)
T ss_dssp CTTHHHHHHHHHHHHHTCEEEEECSCCS--SCSS------C--CSEEEEECCSSTHH----------------HHHHHHH
T ss_pred CChhHHHHHHHHHHHcCCeEEEecCchh--hCCC------C--CCEEEEeCCCCccc----------------hHHHHHH
Confidence 3455566677777777887765443321 1211 1 34555543 22211 2234444
Q ss_pred H---hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcC
Q 011687 372 Q---SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKED 421 (479)
Q Consensus 372 ~---~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~ 421 (479)
. ..+|+|++--..|. ..+....+ .|+--.+.+ ++.++|..+++.++..
T Consensus 74 ~~~~~~~~ii~lt~~~~~-~~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 74 AAGTPRTTLVALVEYESP-AVLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp HHSCTTCEEEEEECCCSH-HHHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred hccCCCCCEEEEEcCCCh-HHHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 4 46788877655444 45556666 688766655 9999999999888743
No 250
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=31.78 E-value=1.6e+02 Score=28.01 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=24.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~ 47 (479)
|+|+++..++ ...+++..|+++ |+++.++.+.
T Consensus 1 m~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~~ 33 (422)
T 2xcl_A 1 MNVLIIGKGG-----REHTLAWKAAQSSLVENVFAAPG 33 (422)
T ss_dssp CEEEEEECSH-----HHHHHHHHHTTCTTCSEEEEEEC
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEeCC
Confidence 6788887663 467888888765 8998888654
No 251
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=31.71 E-value=52 Score=28.88 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=26.4
Q ss_pred HHHHHhhccCCceEEEeCCCccc-------HHHHHHHhCCCcEeE
Q 011687 97 RLINKINEDGRVACVVVDLLASS-------AIGVACRCGVPAAGF 134 (479)
Q Consensus 97 ~~l~~l~~~~~~D~vi~D~~~~~-------~~~~A~~lgiP~v~~ 134 (479)
++++++. .+||+|++|..... |..+.-.+|+|.|.+
T Consensus 99 ~al~~L~--~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 99 AALDALP--CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHTSS--SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHhcC--CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 3444443 27999999986543 567788899999996
No 252
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=31.65 E-value=56 Score=28.14 Aligned_cols=34 Identities=9% Similarity=0.247 Sum_probs=23.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++ |-+ -..+++.|+++||+|+++...
T Consensus 5 ~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 3455555443 433 468899999999999988764
No 253
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.29 E-value=43 Score=27.54 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred CCEEEEecCCCC---CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQ---GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~---gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++|.=+. --.++...|++.|.++|.+|.|..++-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 578888884211 345788999999999999999999975
No 254
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=31.27 E-value=20 Score=31.03 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=25.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+|||.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 23 mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 4799998765444 4688899999999998554
No 255
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=31.24 E-value=42 Score=30.25 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=22.5
Q ss_pred CCEEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.++|+++. .|.- =..-+-.+...++++|++|++++-
T Consensus 7 ~~rvLvv~aHPDD-e~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 7 ATRLLAISPHLDD-AVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp -CEEEEEESSTTH-HHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCEEEEEeCCCh-HHHhHHHHHHHHHHCCCcEEEEEE
Confidence 45555554 4532 234455666677789999998884
No 256
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=31.09 E-value=74 Score=28.02 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++..-+ -..+|+.|+++|++|.++...
T Consensus 22 ~k~vlITGasg~GI--G~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTAAAGTGI--GSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TCEEEESSCSSSSH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCCch--HHHHHHHHHHCCCEEEEecCC
Confidence 46677775542223 358899999999999988754
No 257
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=30.98 E-value=38 Score=30.77 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=28.4
Q ss_pred CEEEEecCCCCC---CHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQG---HVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~g---H~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+++..+... .......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 689999976421 1234567999999999999999874
No 258
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.92 E-value=68 Score=23.99 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHhhccCCceEEEeCCCc--ccHHHHHHHh-------CCCcEeEcch
Q 011687 96 ERLINKINEDGRVACVVVDLLA--SSAIGVACRC-------GVPAAGFWPA 137 (479)
Q Consensus 96 ~~~l~~l~~~~~~D~vi~D~~~--~~~~~~A~~l-------giP~v~~~~~ 137 (479)
.+.++.+... +||+||.|... ..|..+.+.+ ++|++.++..
T Consensus 36 ~~al~~l~~~-~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 36 QIALEKLSEF-TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHTTB-CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHhc-CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
No 259
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=30.81 E-value=44 Score=27.58 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=30.9
Q ss_pred CCEEEEecC-C--CCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPY-P--AQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~-~--~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++|. | -.--.++...|++.|.++|.+|.|..++-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 478888884 2 11345688999999999999999999975
No 260
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=30.53 E-value=45 Score=29.74 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=24.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 28 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 60 (266)
T 3uxy_A 28 GKVALVTGAAGG---IGGAVVTALRAAGARVAVADR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECSS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766553 346899999999999887654
No 261
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=30.45 E-value=80 Score=28.26 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=25.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
..|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 3467777755542 346889999999999998874
No 262
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=30.44 E-value=47 Score=28.69 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=25.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
||.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 566777755543 3468999999999999888764
No 263
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=30.42 E-value=43 Score=31.21 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=33.7
Q ss_pred CCCEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 9 KKNKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+.++|+|+.. |+-|-..-..++|..|+++|++|.++..+.
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3466766664 777999999999999999999999999863
No 264
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=30.41 E-value=93 Score=28.13 Aligned_cols=79 Identities=11% Similarity=0.116 Sum_probs=47.4
Q ss_pred CCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc
Q 011687 38 GFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA 117 (479)
Q Consensus 38 Gh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~ 117 (479)
..+..+.+++.|.-...+ .|++...+.. ...+. +.....+.++++.+++. +..+|++++..
T Consensus 178 ~~~~~v~~H~af~Yf~~~-----yGl~~~~~~~-~~~~~------------eps~~~l~~l~~~ik~~-~v~~if~e~~~ 238 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKR-----FGLKQLGISG-ISPEQ------------EPSPRQLKEIQDFVKEY-NVKTIFAEDNV 238 (286)
T ss_dssp SCCEEEEEESCCHHHHHH-----TTCEEEEEEC-SCC---------------CCHHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred CCCEEEEECCchHHHHHH-----CCCeEeeccc-cCCCC------------CCCHHHHHHHHHHHHHc-CCCEEEEeCCC
Confidence 344455566665555566 6777665432 21111 12333455555555444 89999999866
Q ss_pred cc--HHHHHHHhCCCcEeEc
Q 011687 118 SS--AIGVACRCGVPAAGFW 135 (479)
Q Consensus 118 ~~--~~~~A~~lgiP~v~~~ 135 (479)
.. +-.+|+..|++.+.+.
T Consensus 239 ~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 239 NPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp CTHHHHHHHHTTTCEEEECC
T ss_pred ChHHHHHHHHHhCCeEEEec
Confidence 33 4688999999998753
No 265
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=30.33 E-value=67 Score=29.36 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=24.0
Q ss_pred CEEEEecCCC-CCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPA-QGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~-~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+++++.++ .|-+ -.++|+.|+++|++|.++.
T Consensus 9 ~k~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNGY--GWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTSH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCcH--HHHHHHHHHHCCCEEEEEe
Confidence 4667777652 3333 3588999999999998875
No 266
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=30.29 E-value=35 Score=30.11 Aligned_cols=32 Identities=9% Similarity=0.090 Sum_probs=22.8
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|.++++.+ .|-+ -..+++.|+++|++|+++..
T Consensus 8 k~vlITGa-sggi--G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVITGS-STGL--GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEETTC-SSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CChH--HHHHHHHHHHCCCEEEEEcC
Confidence 44555533 3433 46899999999999998875
No 267
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.28 E-value=49 Score=30.66 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=24.6
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|.+|+|++. |+.|.+- ..|++.|.++||+|+.++-..
T Consensus 8 M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 334666655 4445443 568899999999999998643
No 268
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=30.20 E-value=40 Score=31.18 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=23.9
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
++.|+|++. |+.|.+ -..|++.|.++||+|+.+..
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 345676654 444544 35788999999999999875
No 269
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=29.97 E-value=26 Score=32.99 Aligned_cols=38 Identities=13% Similarity=0.134 Sum_probs=26.1
Q ss_pred CCCCEEEEecCC-CCCC---HHHHHHHHHHHHhCCCeEEEEc
Q 011687 8 KKKNKILMVPYP-AQGH---VTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 8 ~~~~~i~~~~~~-~~gH---~~p~l~la~~L~~rGh~V~~~~ 45 (479)
|+++||+++..| +.=| +....+++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 356788887544 2334 3344578899999999998874
No 270
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.95 E-value=36 Score=30.55 Aligned_cols=32 Identities=22% Similarity=0.117 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 578888765555 36889999999999998764
No 271
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=29.92 E-value=51 Score=28.42 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=24.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
+.|+|++. |+.|.+ -..|++.|.++||+|+.++-..
T Consensus 20 ~~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECCh
Confidence 35676655 344443 3478899999999999998643
No 272
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=29.56 E-value=45 Score=29.76 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=24.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 27 ~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASRG---IGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 567777765542 346899999999999998743
No 273
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=29.50 E-value=55 Score=28.66 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=29.7
Q ss_pred EEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 12 KILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 12 ~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.|+|... |+-|-..-...||..|+++|++|.++=.+.
T Consensus 4 vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 4 IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4444443 667999999999999999999999987643
No 274
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=29.49 E-value=31 Score=31.47 Aligned_cols=33 Identities=9% Similarity=0.230 Sum_probs=26.7
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.++|.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 46899998776665 5888999999999988764
No 275
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=29.47 E-value=90 Score=27.01 Aligned_cols=34 Identities=12% Similarity=0.230 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. -+ -..+|+.|+++|++|.++...
T Consensus 14 ~k~vlITGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAAR-GI--GAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCC-hH--HHHHHHHHHHCCCEEEEEecC
Confidence 46777775543 33 357899999999999888754
No 276
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=29.39 E-value=52 Score=29.75 Aligned_cols=33 Identities=21% Similarity=0.146 Sum_probs=25.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|+|+-.|..|. .+++.|.+.||+|+++...
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 58999997776664 4678888999999987653
No 277
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=29.16 E-value=30 Score=32.23 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=26.7
Q ss_pred CCEEEEecCCCCC-CHH---HHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQG-HVT---PMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~g-H~~---p~l~la~~L~~rGh~V~~~~~ 46 (479)
+|||+++..|..+ |=. ....++++|.+.||+|..+..
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 6788888754332 222 466789999999999998764
No 278
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=29.13 E-value=54 Score=29.49 Aligned_cols=37 Identities=14% Similarity=0.198 Sum_probs=30.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|..-|+-|-..-...||..|+++|++|.++=.+
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 4566655577799999999999999999999988554
No 279
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.10 E-value=81 Score=26.13 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|+|++. |+.|.+ -..+++.|.++||+|+.++...
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeCh
Confidence 666655 444433 4678999999999999988643
No 280
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=29.01 E-value=43 Score=29.72 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=29.1
Q ss_pred CCEEEEec-C-CCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVP-Y-PAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~-~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+++++.+. . |+-|=..-...||..|+ +|++|.++-.+
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 45555444 3 56699999999999999 99999998654
No 281
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=28.97 E-value=58 Score=28.82 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=24.3
Q ss_pred EEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++. |-+- .++|+.|+++|++|+++...
T Consensus 10 k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 10 KRILVTGVASKLSIA--YGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp CEEEECCCCSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHCCCEEEEEcCc
Confidence 5566665542 4443 57899999999999988653
No 282
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=28.89 E-value=37 Score=31.53 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=27.5
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|||.|+-.|..| ..+|..|++.||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5899999877666 47889999999999998764
No 283
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.82 E-value=39 Score=30.96 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=27.0
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++|+|.|+-.|..| ..+|+.|++.||+|++....
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 35899999766544 57899999999999988654
No 284
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.82 E-value=60 Score=28.68 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| --..+|+.|+++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 366677755543 3467899999999999888754
No 285
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.80 E-value=57 Score=25.63 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=23.5
Q ss_pred CceEEEeCCCcc--cHHHHHHHh-------CCCcEeEcchh
Q 011687 107 RVACVVVDLLAS--SAIGVACRC-------GVPAAGFWPAM 138 (479)
Q Consensus 107 ~~D~vi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (479)
+||+||.|...+ .|..+++.+ ++|++.++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 899999998764 367666654 58888876543
No 286
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=28.79 E-value=1.7e+02 Score=26.70 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=50.4
Q ss_pred CCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhccCCceEEEeCCCc
Q 011687 38 GFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENIMPIHLERLINKINEDGRVACVVVDLLA 117 (479)
Q Consensus 38 Gh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~D~vi~D~~~ 117 (479)
..+..+++++.|.-...+ .|++...+. +...+.. .....+.++++.+++. +..+|++++..
T Consensus 189 ~~~~~v~~H~af~Yfa~~-----yGl~~~~~~-~~~~~~e------------ps~~~l~~l~~~ik~~-~v~~If~e~~~ 249 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLAKE-----YGLKQVPIA-GLSPDQE------------PSAASLAKLKTYAKEH-NVKVIYFEEIA 249 (312)
T ss_dssp SCCEEEESSCTTHHHHHH-----TTCEEEECS-SCCSSSC------------CCHHHHHHHHHHTTSS-CCCEEECSSCC
T ss_pred CCCEEEEECCchHHHHHH-----CCCeEEEee-ccCCCCC------------CCHHHHHHHHHHHHHc-CCCEEEEeCCC
Confidence 445556666666555666 788776553 2221111 2334456666666555 89999999866
Q ss_pred cc--HHHHHHHhCCCcEeEc
Q 011687 118 SS--AIGVACRCGVPAAGFW 135 (479)
Q Consensus 118 ~~--~~~~A~~lgiP~v~~~ 135 (479)
.. +-.+|+..|++.+.+.
T Consensus 250 ~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 250 SSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp CHHHHHHHHHHTCCEEECCC
T ss_pred ChHHHHHHHHHhCCcEEEec
Confidence 43 5688999999988764
No 287
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=28.77 E-value=54 Score=30.00 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=26.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+||.|+-.|..|. ++|+.|.+.||+|++.--
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 6899999998884 689999999999998753
No 288
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=28.75 E-value=53 Score=29.64 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=24.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+++++.++.| =-.++|+.|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 467777765543 34689999999999999987
No 289
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=28.72 E-value=40 Score=29.12 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=23.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
||.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456667655532 3468899999999999988764
No 290
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=28.59 E-value=19 Score=18.88 Aligned_cols=17 Identities=18% Similarity=0.393 Sum_probs=14.3
Q ss_pred chhHHHHHHHhCcceec
Q 011687 363 GWNSTMEAIQSGKRLLC 379 (479)
Q Consensus 363 G~~s~~eal~~GvP~l~ 379 (479)
|.|+++-.|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888999999999765
No 291
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.56 E-value=2e+02 Score=22.75 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=24.0
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcC
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGF 318 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~ 318 (479)
.++ |++|.+. ...+.+..++..+..+|+.+ +.+++
T Consensus 24 ~~g-vliSv~d----~dK~~l~~~a~~l~~lGf~i-~AT~G 58 (143)
T 2yvq_A 24 QKG-ILIGIQQ----SFRPRFLGVAEQLHNEGFKL-FATEA 58 (143)
T ss_dssp CSE-EEEECCG----GGHHHHHHHHHHHHTTTCEE-EEEHH
T ss_pred CCC-EEEEecc----cchHHHHHHHHHHHHCCCEE-EECch
Confidence 467 8888654 45566667888888888864 45543
No 292
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=28.51 E-value=49 Score=27.84 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=30.8
Q ss_pred CCEEEEecCCCC---CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQ---GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~---gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++|.=+. --.++...|++.|.++|.+|.|..++-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 468888884211 345688999999999999999999974
No 293
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=28.30 E-value=52 Score=29.70 Aligned_cols=35 Identities=17% Similarity=0.241 Sum_probs=26.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.+++-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4577788866543 3458899999999999988764
No 294
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=28.27 E-value=53 Score=30.17 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=23.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+|++. |+.|.+- ..|++.|.++||+|+.+..
T Consensus 5 ~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVT--GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEe--cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 3565544 3444433 5789999999999999875
No 295
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=28.23 E-value=54 Score=27.48 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=25.3
Q ss_pred CCEEEEecCCCCCCHHHHHH-HHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHK-LASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~-la~~L~~rGh~V~~~~~ 46 (479)
+|||+++-.. .|+..-+.. +++.|.+.|++|.++--
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 3788888766 887665543 46666667999988754
No 296
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=28.20 E-value=60 Score=28.40 Aligned_cols=33 Identities=15% Similarity=0.092 Sum_probs=23.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
||.++++.++. - =-.++++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 45566664443 2 346789999999999988765
No 297
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.20 E-value=63 Score=24.33 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=26.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVI 44 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~ 44 (479)
.|||++++..|.|+-.-.-.+-+.+.++|.++.+-
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 47899999887777766667788888888876543
No 298
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=28.11 E-value=40 Score=32.02 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=26.9
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++..+|+|+-.|-.| +.+|..|+++|++|+++-..
T Consensus 24 ~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 345788888766433 67888999999999998653
No 299
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=27.97 E-value=27 Score=32.96 Aligned_cols=37 Identities=11% Similarity=0.069 Sum_probs=27.0
Q ss_pred CCEEEEecCCCCCCH----HHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHV----TPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~----~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+|||+++..|-.+-. .....++++|.++||+|..+..
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 578888885433322 3447889999999999998864
No 300
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.96 E-value=51 Score=27.85 Aligned_cols=39 Identities=21% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCEEEEecCCCC---CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQ---GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~---gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++|.=+. --.++...|++.|.++|.+|.|..++-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 468888884211 345788999999999999999999974
No 301
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=27.95 E-value=1.4e+02 Score=28.78 Aligned_cols=25 Identities=16% Similarity=0.158 Sum_probs=19.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGF 39 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh 39 (479)
+|||+++..+++ -.+||+.|.+.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 489999977754 4578999988764
No 302
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=27.82 E-value=94 Score=26.23 Aligned_cols=39 Identities=8% Similarity=0.047 Sum_probs=27.6
Q ss_pred CCCEEEEecCCC---CCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPA---QGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~---~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+|.++.... ..+..-...|++.|+++|+.|.+-...
T Consensus 12 ~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 458899888654 123456778899999999988776543
No 303
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=27.74 E-value=76 Score=28.57 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=28.0
Q ss_pred CCEEEEecCCCC-CCHH---HHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQ-GHVT---PMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~-gH~~---p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 378888875432 2322 4468999999999999999875
No 304
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.71 E-value=58 Score=28.63 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3566777755543 3468999999999999988754
No 305
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.60 E-value=39 Score=30.67 Aligned_cols=32 Identities=9% Similarity=0.059 Sum_probs=25.6
Q ss_pred hhcccCccceEeccchhHHHHHHHh----CcceecccC
Q 011687 349 VLQHNAVGFYLTHCGWNSTMEAIQS----GKRLLCYPV 382 (479)
Q Consensus 349 lL~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 382 (479)
+-..+++ +|.=||=||+++++.. ++|++.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345566 9999999999999853 789998874
No 306
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=27.59 E-value=21 Score=33.69 Aligned_cols=32 Identities=28% Similarity=0.231 Sum_probs=25.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 16 ~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 389999877665 46788999999999998764
No 307
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=27.51 E-value=73 Score=28.15 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=25.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 466777755543 2468899999999999888753
No 308
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=27.45 E-value=40 Score=29.50 Aligned_cols=33 Identities=9% Similarity=0.070 Sum_probs=22.9
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.++++ |+.|.+ -..+++.|+++|++|+++...
T Consensus 8 k~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEECCC
Confidence 344555 344443 357899999999999988653
No 309
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.45 E-value=63 Score=29.18 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=23.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 566555 4445543 46789999999999998864
No 310
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=27.45 E-value=55 Score=29.45 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=26.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777765543 3468999999999999988754
No 311
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.44 E-value=15 Score=36.25 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=28.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.|||+++..|-.| ..||+.|.+.||+|+++-...
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 5899999877555 468999999999999997753
No 312
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=27.31 E-value=1.4e+02 Score=26.24 Aligned_cols=58 Identities=16% Similarity=0.182 Sum_probs=35.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPD 70 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~ 70 (479)
|||++.-=-+. +---...|+++|.+.| +|+++.+...+........-...+++..++.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~ 58 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPS 58 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEecc
Confidence 56666553332 3344778899998888 9999999875444433222234466666643
No 313
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=27.20 E-value=65 Score=28.57 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=25.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777766543 3458899999999999888753
No 314
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.12 E-value=40 Score=28.70 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=24.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|||++. |+.|-+- ..+++.|.++||+|+.++-..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 465554 4444433 588999999999999998754
No 315
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=27.10 E-value=49 Score=28.68 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=30.0
Q ss_pred EEEEec-CCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCc
Q 011687 12 KILMVP-YPAQGHVTPMHKLASILTSR-GFEPIVITPEF 48 (479)
Q Consensus 12 ~i~~~~-~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~ 48 (479)
.|.|.. -|+-|-..-...||..|+++ |++|.++-.+.
T Consensus 6 vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 6 VFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 444444 36779999999999999998 99999997754
No 316
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=27.08 E-value=20 Score=32.94 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=24.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.++|+++-.|-.| +..|..|+++|++|+++-.
T Consensus 8 ~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 4678887755333 6788899999999999976
No 317
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=27.07 E-value=2.7e+02 Score=23.15 Aligned_cols=140 Identities=18% Similarity=0.144 Sum_probs=79.2
Q ss_pred CcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccce
Q 011687 279 NSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFY 358 (479)
Q Consensus 279 ~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ 358 (479)
.+.|-|-+|| ..+....++....++.++..+-..+-+-++ .|+.+.+-. -+.. -...++ |
T Consensus 21 ~~~V~IimGS---~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~l~~~~------------~~a~-~~g~~V--i 80 (182)
T 1u11_A 21 APVVGIIMGS---QSDWETMRHADALLTELEIPHETLIVSAHR--TPDRLADYA------------RTAA-ERGLNV--I 80 (182)
T ss_dssp CCSEEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHHHHHH------------HHTT-TTTCCE--E
T ss_pred CCEEEEEECc---HHHHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHHHHHHH------------HHHH-hCCCcE--E
Confidence 4567788888 456777888999999998887555544332 333321110 0000 011234 7
Q ss_pred Eeccch----hHHHHHHHhCcceecccCccch--hhHHH-HHHHH-hccee---eeC--C-CCHHHHHHHHHHHhcCHHH
Q 011687 359 LTHCGW----NSTMEAIQSGKRLLCYPVAGDQ--FINCA-YIVKM-WKIGI---RVN--G-FGKRDIEDGLKKLKEDSEM 424 (479)
Q Consensus 359 I~HgG~----~s~~eal~~GvP~l~~P~~~DQ--~~nA~-rv~~~-~Gvg~---~~~--~-~~~~~i~~~i~~vl~~~~~ 424 (479)
|.=+|. .++..++ .-+|+|.+|..... -..+. -+.+. .|+.+ .++ + .+..-++..|- -+.|+++
T Consensus 81 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~l 158 (182)
T 1u11_A 81 IAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALYNPAL 158 (182)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGGCHHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH-ccCCHHH
Confidence 776663 4444444 57999999986521 11111 12220 13332 123 2 55555565554 3478999
Q ss_pred HHHHHHHHHHHccccc
Q 011687 425 KHRLMNLYMRTMGDDG 440 (479)
Q Consensus 425 ~~~a~~l~~~~~~~~~ 440 (479)
+++.+..+++......
T Consensus 159 ~~kL~~~r~~~~~~v~ 174 (182)
T 1u11_A 159 AARLETWRALQTASVP 174 (182)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877533
No 318
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=27.05 E-value=42 Score=31.63 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=28.2
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|||.|+-.|..| ..+|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 36899999877665 46889999999999999875
No 319
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.99 E-value=31 Score=31.80 Aligned_cols=54 Identities=13% Similarity=0.120 Sum_probs=36.1
Q ss_pred hcccCccceEeccchhHHHHHHHh----CcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHhc
Q 011687 350 LQHNAVGFYLTHCGWNSTMEAIQS----GKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLKE 420 (479)
Q Consensus 350 L~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl~ 420 (479)
...+++ +|.-||=||+++++.. ++|++.++.. . + |. +..+.++++.++++.+++
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~-~--gf-l~~~~~~~~~~~~~~i~~ 130 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------R-I--GF-LAEAEAEAIDAVLEHVVA 130 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------S-C--CS-SCSEEGGGHHHHHHHHHH
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------C-C--cc-CcccCHHHHHHHHHHHHc
Confidence 344566 9999999999999854 8999988743 1 2 21 112446777777777763
No 320
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=26.92 E-value=63 Score=28.87 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 466777765543 346889999999999988865
No 321
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=26.92 E-value=94 Score=26.75 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=23.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+++ +++ |+.|.+ -..+++.|+++|++|+++...
T Consensus 7 ~~~v-lVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 7 GLRA-LVT-GAGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TCEE-EEE-STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEE-EEe-CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3454 444 333433 357899999999999988754
No 322
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=26.92 E-value=47 Score=29.44 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677755543 3468899999999999988764
No 323
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=26.91 E-value=34 Score=32.12 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=26.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..+|+++-.|..| +.+|..|+++|++|+++-..
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4678888766444 78899999999999999764
No 324
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=26.69 E-value=41 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.399 Sum_probs=24.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~ 47 (479)
.+|+|++. |+.|.+- ..|++.|.++ ||+|+.+.-.
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 23 KAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 35676654 4455444 4788999998 9999999864
No 325
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=26.65 E-value=33 Score=31.70 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=26.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCC-CeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRG-FEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rG-h~V~~~~~~ 47 (479)
.|+|.|+-.|..| ..+|..|++.| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3789999877555 67899999999 999987653
No 326
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=26.58 E-value=2.1e+02 Score=27.53 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=23.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHh-CCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTS-RGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~-rGh~V~~~~~~ 47 (479)
.|+|+++..++ ...++++.|++ .|++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 36888887663 35677888865 48987777654
No 327
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=26.53 E-value=69 Score=28.01 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=23.2
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |- --..+++.|+++|++|+++...
T Consensus 14 k~vlItGas-gg--iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QN--IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 32 2367999999999999988754
No 328
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=26.52 E-value=84 Score=27.29 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=23.5
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |- --..+++.|+++|++|+++...
T Consensus 12 k~vlITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAG-SG--IGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 32 3468899999999999988764
No 329
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=26.40 E-value=49 Score=30.06 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=27.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|.|+-.|..|. .+|+.|++.||+|+++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 47999998777664 6788999999999988654
No 330
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=26.23 E-value=52 Score=30.92 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=24.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCC-CeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRG-FEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rG-h~V~~~~~~ 47 (479)
.|+|++. |+.|.+ -..|++.|.++| |+|+.+...
T Consensus 32 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 32 NTNVMVV--GGAGFV--GSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp TCEEEEE--TTTSHH--HHHHHHHHHHTTCSEEEEECCC
T ss_pred CCEEEEE--CCccHH--HHHHHHHHHHcCCceEEEEECC
Confidence 4566554 444544 357889999999 999998754
No 331
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=26.03 E-value=61 Score=28.45 Aligned_cols=33 Identities=12% Similarity=-0.125 Sum_probs=23.5
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
||.++++.++.| + -.++|+.|+++|++|.++..
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 466777755543 3 35789999999999887654
No 332
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.02 E-value=70 Score=28.67 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777765543 346899999999999998875
No 333
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=25.87 E-value=43 Score=31.57 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=26.6
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|.|+-.|..| ..+|..|+++||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 35899999766544 47889999999999988654
No 334
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=25.85 E-value=72 Score=25.14 Aligned_cols=37 Identities=22% Similarity=0.428 Sum_probs=25.5
Q ss_pred CEEEEecCCCCCCHHHHH-HHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMH-KLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l-~la~~L~~rGh~V~~~~~~ 47 (479)
|||+++-....|+..-+. .|++.|.++|++|.++--.
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 566666555567765444 4677787889999887654
No 335
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=25.65 E-value=48 Score=29.45 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=24.7
Q ss_pred CEEEEecCCC-CCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPA-QGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~-~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++ .|-+ -.++|+.|+++|++|.++...
T Consensus 7 ~k~vlVTGa~~s~gI--G~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 7 GKRILVSGIITDSSI--AFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp TCEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCCch--HHHHHHHHHHCCCEEEEEecC
Confidence 3566666551 4444 357899999999999987653
No 336
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=25.64 E-value=82 Score=28.85 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=24.5
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. -+ -..+|+.|+++|++|.++.-.
T Consensus 8 ~k~vlVTGas~-gI--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGAN-GV--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTTS-TH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCch-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 45666665543 33 357899999999999888754
No 337
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=25.60 E-value=73 Score=28.02 Aligned_cols=34 Identities=18% Similarity=0.067 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666655543 3368999999999999988754
No 338
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.53 E-value=83 Score=29.24 Aligned_cols=73 Identities=10% Similarity=0.027 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHH
Q 011687 293 IGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQ 372 (479)
Q Consensus 293 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~ 372 (479)
.+.+-...+.+++..-..+.||.+.++. +-.++.+++++..+-++|.. ||=+.-..+..-|++
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~ 124 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY---------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNAIY 124 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS---------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc---------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHHHH
Confidence 3456667799999988889999987653 22334555666656566776 777777777777766
Q ss_pred --hCcceecccC
Q 011687 373 --SGKRLLCYPV 382 (479)
Q Consensus 373 --~GvP~l~~P~ 382 (479)
.|+..+-=|.
T Consensus 125 ~~~G~~t~hGp~ 136 (331)
T 4e5s_A 125 TKTGLVTYSGPH 136 (331)
T ss_dssp HHHCBCEEECCC
T ss_pred HhhCCcEEEccc
Confidence 4666655444
No 339
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=25.50 E-value=67 Score=28.84 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=25.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 7 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 7 EGKIAIVTGASSG---IGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3467777765543 2457899999999998877653
No 340
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=25.44 E-value=59 Score=32.11 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=33.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIP 69 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~ 69 (479)
.+++++.. ++=.-++.+|+.|.+.|+++. .|. ...+.+++ .|+.+..+.
T Consensus 24 i~raLISV----~DK~glv~~Ak~L~~lGfeI~-ATg-GTak~L~e-----~GI~v~~V~ 72 (534)
T 4ehi_A 24 AMRALLSV----SDKEGIVEFGKELENLGFEIL-STG-GTFKLLKE-----NGIKVIEVS 72 (534)
T ss_dssp CCEEEEEE----SSCTTHHHHHHHHHHTTCEEE-ECH-HHHHHHHH-----TTCCCEECB
T ss_pred CcEEEEEE----cccccHHHHHHHHHHCCCEEE-Ecc-HHHHHHHH-----CCCceeehh
Confidence 35555554 234457899999999999875 443 44467777 788777766
No 341
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=25.42 E-value=91 Score=27.12 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=22.4
Q ss_pred CceEEEeCCCccc-------HHHHHHHhCCCcEeE
Q 011687 107 RVACVVVDLLASS-------AIGVACRCGVPAAGF 134 (479)
Q Consensus 107 ~~D~vi~D~~~~~-------~~~~A~~lgiP~v~~ 134 (479)
+||+|++|..... |.++...+|+|+|.+
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 7999999986654 456667779999996
No 342
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=25.37 E-value=2.8e+02 Score=26.26 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=23.5
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHh-CCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTS-RGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~-rGh~V~~~~~~ 47 (479)
|+|+++..++ .+..++..+++ .|++++++.+.
T Consensus 1 m~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~~ 33 (424)
T 2yw2_A 1 MKVLVVGNGG-----REHAIAWKVAQSPLVKELYVAKG 33 (424)
T ss_dssp CEEEEEESSH-----HHHHHHHHHTTCTTCSEEEEEEC
T ss_pred CEEEEECCCH-----HHHHHHHHHhhCCCCCEEEEECC
Confidence 6788887663 46788888875 48998887653
No 343
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=25.24 E-value=90 Score=26.18 Aligned_cols=38 Identities=18% Similarity=0.280 Sum_probs=32.4
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
++++.|++...++.|=-.-...|++.|...|+.|..+.
T Consensus 7 ~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~ 44 (215)
T 1nn5_A 7 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 44 (215)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEee
Confidence 45688888889999999999999999999999986554
No 344
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=25.19 E-value=1.1e+02 Score=27.28 Aligned_cols=38 Identities=16% Similarity=0.385 Sum_probs=30.6
Q ss_pred CCEEEEec--CCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVP--YPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~--~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+++++++ -|+-|-..-...||..|++.|.+|.++-.+
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 44555444 367799999999999999999999998764
No 345
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=25.08 E-value=71 Score=29.55 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=32.2
Q ss_pred CCEEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.++|+|+. -|+-|-..-...||..|+++|++|.++..+.
T Consensus 18 ~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~ 57 (329)
T 2woo_A 18 SLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDP 57 (329)
T ss_dssp TCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCT
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 35566555 4677999999999999999999999998764
No 346
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.08 E-value=53 Score=28.65 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhccCCceEEEeCCCcccHHHHHHHhCCCcEeEcc
Q 011687 93 IHLERLINKINEDGRVACVVVDLLASSAIGVACRCGVPAAGFWP 136 (479)
Q Consensus 93 ~~l~~~l~~l~~~~~~D~vi~D~~~~~~~~~A~~lgiP~v~~~~ 136 (479)
+..++.++++++. ++|+||.|. .+..+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~~-G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKAN-GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHT-TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHC-CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4556677777555 899999986 347899999999999874
No 347
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.02 E-value=52 Score=29.30 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|+|++.. + |.+- ..|++.|.++||+|+.++-..
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 6777663 5 6554 468899999999999998643
No 348
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=25.00 E-value=82 Score=27.78 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=30.0
Q ss_pred CEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|... |+-|=..-...||..|+++|++|.++=.+
T Consensus 19 ~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 19 SRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp CEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35555553 66799999999999999999999998754
No 349
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=24.94 E-value=70 Score=24.35 Aligned_cols=64 Identities=16% Similarity=0.069 Sum_probs=43.4
Q ss_pred hcccCccceEeccchhH---------HHHHHHhCcceecccCccchhhHHHHHHHHhcceeeeCCCCHHHHHHHHHHHh
Q 011687 350 LQHNAVGFYLTHCGWNS---------TMEAIQSGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNGFGKRDIEDGLKKLK 419 (479)
Q Consensus 350 L~~~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~~~~~~i~~~i~~vl 419 (479)
+..+++ +|--.|..| +..|...|+|++++=..+.+. .-..+++ .+. .+-.-+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~-~a~--~iV~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA-VSS--EVVGWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH-HCS--EEECSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh-hCc--eeccCCHHHHHHHHHhcc
Confidence 334556 888888877 677888999999986666541 1122444 333 233478899999998876
No 350
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=24.90 E-value=74 Score=27.03 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=29.5
Q ss_pred CEEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.|.|.. -|+-|-..-...||..|+++| +|.++-.+
T Consensus 1 kvI~v~s~KGGvGKTT~a~~LA~~la~~g-~VlliD~D 37 (209)
T 3cwq_A 1 MIITVASFKGGVGKTTTAVHLSAYLALQG-ETLLIDGD 37 (209)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHTTS-CEEEEEEC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHHHhcC-CEEEEECC
Confidence 3566664 477799999999999999999 99998654
No 351
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=24.90 E-value=71 Score=27.85 Aligned_cols=23 Identities=13% Similarity=0.150 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCc
Q 011687 26 PMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 26 p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
--.++|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 45689999999999999986643
No 352
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.90 E-value=83 Score=26.55 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=29.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
..++++..|..|+-.-...+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456666677778778899999999999999887765
No 353
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.84 E-value=93 Score=27.41 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=23.1
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++. - =-..+++.|+++|++|+++.-.
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQ-G--IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-c--HHHHHHHHHHHCCCEEEEEECC
Confidence 4555654443 2 2457899999999999988653
No 354
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=24.81 E-value=75 Score=27.81 Aligned_cols=33 Identities=9% Similarity=0.093 Sum_probs=23.2
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |-+ -..+++.|+++|++|+++...
T Consensus 8 k~vlITGas-ggi--G~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAG-SGI--GRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 323 357899999999999988754
No 355
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.78 E-value=92 Score=24.39 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=64.8
Q ss_pred ccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEee-eehHHhhcccCccceEeccchhHHHH
Q 011687 291 SPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPW-APQLKVLQHNAVGFYLTHCGWNSTME 369 (479)
Q Consensus 291 ~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~-~pq~~lL~~~~~~~~I~HgG~~s~~e 369 (479)
+...+.....+...++..|+..+.....+.. .+ ....+-+ .++.+.+| +|..+ |. .+.+
T Consensus 18 VDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~-al--~~~~~~~--~DlillD~~MP~md--------------G~-el~~ 77 (134)
T 3to5_A 18 VDDFSTMRRIVKNLLRDLGFNNTQEADDGLT-AL--PMLKKGD--FDFVVTDWNMPGMQ--------------GI-DLLK 77 (134)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEEESSHHH-HH--HHHHHHC--CSEEEEESCCSSSC--------------HH-HHHH
T ss_pred EeCCHHHHHHHHHHHHHcCCcEEEEECCHHH-HH--HHHHhCC--CCEEEEcCCCCCCC--------------HH-HHHH
Confidence 3456677777888888888876544432210 01 1111222 46666665 34322 11 2223
Q ss_pred HHH-----hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhc
Q 011687 370 AIQ-----SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKE 420 (479)
Q Consensus 370 al~-----~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~ 420 (479)
.+. ..+|+|++--..+. ....+..+ .|+--.+.| ++.++|.++|+++++
T Consensus 78 ~ir~~~~~~~ipvI~lTa~~~~-~~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 78 NIRADEELKHLPVLMITAEAKR-EQIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHSTTTTTCCEEEEESSCCH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCCeEEEEECCCCH-HHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 332 46888888655544 45556667 788877776 999999999999873
No 356
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=24.75 E-value=85 Score=29.68 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=28.3
Q ss_pred CcccCCC-CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 1 MVNMMCT-KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 1 ~~~~~~~-~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.+|... ++.++|+++..|. -...+++++.+.|++|.++.+.
T Consensus 4 ~~~m~~~~~~~k~IlIlG~G~-----~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 4 MLDMTRIILPGKTIGIIGGGQ-----LGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp ---CCCCCCTTSEEEEECCSH-----HHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccccCCCCCEEEEECCCH-----HHHHHHHHHHHcCCEEEEEeCC
Confidence 4455432 2456888886443 3678899999999999998764
No 357
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=24.68 E-value=67 Score=29.44 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=24.4
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC-C-CeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR-G-FEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r-G-h~V~~~~~~ 47 (479)
++|+|+++..+.. .++++.|++. | ++|.++...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 4589999865554 4789999876 7 888887653
No 358
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=24.54 E-value=1.9e+02 Score=26.88 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=21.1
Q ss_pred ccCccceEeccchhHH---HHHHHhCcceecc
Q 011687 352 HNAVGFYLTHCGWNST---MEAIQSGKRLLCY 380 (479)
Q Consensus 352 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~~ 380 (479)
.||+ +|++||.-|. ..|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 5777 9999998664 5577789999863
No 359
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=24.46 E-value=54 Score=30.53 Aligned_cols=33 Identities=15% Similarity=0.372 Sum_probs=25.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
...|+++-.|..| +.+|..|+++|++|+++-..
T Consensus 6 ~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIG-----LSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEecc
Confidence 4688888766444 67888999999999999643
No 360
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=24.42 E-value=76 Score=31.55 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=32.5
Q ss_pred CCEEEEecCC---CCCCHHHHHHHHHHHHhCCCeEEEEcCCcc
Q 011687 10 KNKILMVPYP---AQGHVTPMHKLASILTSRGFEPIVITPEFI 49 (479)
Q Consensus 10 ~~~i~~~~~~---~~gH~~p~l~la~~L~~rGh~V~~~~~~~~ 49 (479)
+||.+|++.| +-|-=.-..+|+..|..||++||.+=-+.+
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpy 44 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPY 44 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcc
Confidence 3799999976 446667788999999999999999876543
No 361
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.41 E-value=71 Score=27.20 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=28.3
Q ss_pred EEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 12 KILMVPY-PAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 12 ~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|++... |+-|-..-...||..|+++|++|.++=
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 4555554 677999999999999999999999963
No 362
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=24.41 E-value=66 Score=28.39 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=26.2
Q ss_pred HHHHHhhccCCceEEEeCCCccc-------HHHHHHHhCCCcEeE
Q 011687 97 RLINKINEDGRVACVVVDLLASS-------AIGVACRCGVPAAGF 134 (479)
Q Consensus 97 ~~l~~l~~~~~~D~vi~D~~~~~-------~~~~A~~lgiP~v~~ 134 (479)
++++++. .+||+|++|..... |..+.-.+|+|.|.+
T Consensus 101 ~al~~L~--~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 101 EAAKKLE--TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHCS--SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHhcC--CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 3444543 27999999975533 567778889999996
No 363
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=24.33 E-value=75 Score=28.54 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=24.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. -+ -.++|+.|+++|++|.++.-.
T Consensus 16 gk~vlVTGas~-gI--G~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 16 QRTVVITGANS-GL--GAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp TCEEEEECCSS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCC-hH--HHHHHHHHHHCCCEEEEEECC
Confidence 35666665543 22 368999999999999998764
No 364
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=24.23 E-value=2.5e+02 Score=26.41 Aligned_cols=86 Identities=9% Similarity=0.037 Sum_probs=50.8
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcc--cccCCCchhHHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKEDSEMKHRLMNLYMRTMG--DDGARARVMNNL 449 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~~~~~~a~~l~~~~~~--~~~~g~~~~~~~ 449 (479)
..+|+|++.-..+ ...+....+ .|+--.+.+ ++.++|...|++++.....++....+...... ..-.|.+ ...
T Consensus 71 ~~~pvIvlT~~~~-~~~~~~a~~-~Ga~dyl~KP~~~~~L~~~i~~~l~~~~l~~~~~~l~~~~~~~~~~~ig~s--~~m 146 (387)
T 1ny5_A 71 PETEVIVITGHGT-IKTAVEAMK-MGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFES--PKM 146 (387)
T ss_dssp TTSEEEEEEETTC-HHHHHHHHT-TTCCEEEEESCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCS--HHH
T ss_pred CCCcEEEEeCCCC-HHHHHHHHh-cCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhhhhcc--HHh
Confidence 4678888755444 445555666 687666666 99999999999998655544443344333211 1112222 456
Q ss_pred HHHHHHHHhhhcC
Q 011687 450 TGFVDDLSKLTRN 462 (479)
Q Consensus 450 ~~~~~~~~~~~~~ 462 (479)
.++.+.++.....
T Consensus 147 ~~l~~~i~~~a~~ 159 (387)
T 1ny5_A 147 KEILEKIKKISCA 159 (387)
T ss_dssp HHHHHHHHHHTTC
T ss_pred hHHHHHHHHhcCC
Confidence 6666666655443
No 365
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.19 E-value=92 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| =-..+|+.|+++|++|+++...
T Consensus 26 ~k~vlVTGas~g---IG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 26 GKSVIITGSSNG---IGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466677755442 3468899999999999988653
No 366
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=24.16 E-value=86 Score=27.85 Aligned_cols=35 Identities=11% Similarity=-0.024 Sum_probs=24.5
Q ss_pred CEEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. |-+- .++|+.|+++|++|.++...
T Consensus 6 ~k~vlVTGas~~~gIG--~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIA--YGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TCEEEEECCCSTTSHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEeCC
Confidence 35566665541 4443 57899999999999988653
No 367
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=24.05 E-value=76 Score=26.64 Aligned_cols=40 Identities=10% Similarity=0.229 Sum_probs=27.3
Q ss_pred HHHHHHHhhccCCceEEEeCCCcccHH------HHHHHhCCCcEeE
Q 011687 95 LERLINKINEDGRVACVVVDLLASSAI------GVACRCGVPAAGF 134 (479)
Q Consensus 95 l~~~l~~l~~~~~~D~vi~D~~~~~~~------~~A~~lgiP~v~~ 134 (479)
+.+++++++...++|+|+.|...++++ .+...+|+|+|.+
T Consensus 52 i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V 97 (184)
T 2qh9_A 52 LISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVV 97 (184)
T ss_dssp HHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEE
T ss_pred HHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEE
Confidence 333454543222369999998766533 6788999999987
No 368
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.00 E-value=95 Score=27.62 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| --.++|+.|+++|++|+++...
T Consensus 6 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 6 NKTVIITGSSNG---IGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456677755442 3457899999999999988653
No 369
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.93 E-value=81 Score=28.11 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=24.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 466677755542 346899999999999998864
No 370
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=23.88 E-value=64 Score=29.54 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=23.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|++. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 3565544 4445443 56889999999999998754
No 371
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=23.73 E-value=1e+02 Score=30.33 Aligned_cols=39 Identities=13% Similarity=-0.076 Sum_probs=33.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCcc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPEFI 49 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~~ 49 (479)
.-+++...|+.|=..-++.+|..++.+ |..|.+++.+..
T Consensus 243 ~l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s 282 (503)
T 1q57_A 243 EVIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEES 282 (503)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSC
T ss_pred eEEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCC
Confidence 456666678999999999999999987 999999998753
No 372
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.63 E-value=38 Score=26.74 Aligned_cols=51 Identities=10% Similarity=-0.054 Sum_probs=33.4
Q ss_pred hCcceecccCccchhhHHHHHHHHhc-ceeeeCC-CCHHHHHHHHHHHhcCHHHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWK-IGIRVNG-FGKRDIEDGLKKLKEDSEMK 425 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~G-vg~~~~~-~~~~~i~~~i~~vl~~~~~~ 425 (479)
..+|+|++--..+ ........+ .| +--.+.+ ++.++|..+|+.++.....+
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~~~~~ 130 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQLAFLR 130 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHHHHHH
Confidence 4788887765544 334444445 45 6445555 99999999999998544443
No 373
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=23.62 E-value=96 Score=26.57 Aligned_cols=40 Identities=20% Similarity=0.127 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+|+.+-|+|...++.|--.-+..|++.|..+|+.|...-.
T Consensus 3 ~m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~ 42 (213)
T 4edh_A 3 AMTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTRE 42 (213)
T ss_dssp --CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccC
Confidence 4556788888888999999999999999999999965433
No 374
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.56 E-value=74 Score=28.87 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=23.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 555554 4555553 46889999999999998864
No 375
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=23.44 E-value=78 Score=31.16 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=28.9
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC-CC-eEEEEcCCc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR-GF-EPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh-~V~~~~~~~ 48 (479)
+.|||.|+-.|..| .++|..|++. || +|+++-...
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 45899999887777 4788999999 99 999987643
No 376
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=23.41 E-value=55 Score=28.06 Aligned_cols=34 Identities=21% Similarity=0.074 Sum_probs=25.4
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
..|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 5 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 38 (223)
T 3uce_A 5 DKTVYVVLGGTSG---IGAELAKQLESEHTIVHVASR 38 (223)
T ss_dssp CCEEEEEETTTSH---HHHHHHHHHCSTTEEEEEESG
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEecC
Confidence 3577777765543 346889999999999988764
No 377
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=23.41 E-value=1.2e+02 Score=26.57 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=23.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++ |-+ -.++|+.|+++|++|.++...
T Consensus 8 ~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 8 GKSALITGSA-RGI--GRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp TCEEEEETCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3555566444 322 357899999999999888653
No 378
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=23.19 E-value=81 Score=27.28 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=22.3
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++ |+.|.+ -..+++.|+++||+|+++...
T Consensus 2 k~vlVt-Gasg~i--G~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 2 SVIAIT-GSASGI--GAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEe-CCCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 344455 333433 456889999999999988653
No 379
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=23.12 E-value=91 Score=27.86 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=29.5
Q ss_pred HHHHHHHHhhccCCceEEEeCCCcc------cHHHHHHHhCCCcEeEcc
Q 011687 94 HLERLINKINEDGRVACVVVDLLAS------SAIGVACRCGVPAAGFWP 136 (479)
Q Consensus 94 ~l~~~l~~l~~~~~~D~vi~D~~~~------~~~~~A~~lgiP~v~~~~ 136 (479)
.+.+++++. +||+||+..... -+..+|+.||+|.+....
T Consensus 103 ~La~~i~~~----~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 103 ILTEVIKKE----APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHH----CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhc----CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 345556665 899999876442 578999999999998643
No 380
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=23.11 E-value=1.5e+02 Score=22.40 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=24.1
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
++++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 3 ~~~~~~iLivd----d~~~~~~~l~~~l~~~g~~v~~~~~ 38 (140)
T 3grc_A 3 LAPRPRILICE----DDPDIARLLNLMLEKGGFDSDMVHS 38 (140)
T ss_dssp --CCSEEEEEC----SCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCEEEEc----CCHHHHHHHHHHHHHCCCeEEEECC
Confidence 33467888874 4555666778888888988766554
No 381
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.01 E-value=64 Score=30.02 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=20.7
Q ss_pred CceEEEeCCCcc-cHHHHHHHhCCCcEeEc
Q 011687 107 RVACVVVDLLAS-SAIGVACRCGVPAAGFW 135 (479)
Q Consensus 107 ~~D~vi~D~~~~-~~~~~A~~lgiP~v~~~ 135 (479)
+||+||+..... ....+.+.+|||++.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 999999865332 22345678999999874
No 382
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=22.97 E-value=48 Score=32.62 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=25.1
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhC-----CCeEEEEcCCc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSR-----GFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~r-----Gh~V~~~~~~~ 48 (479)
++|||.++..|+ + -..++|..|+.+ |++|++.-...
T Consensus 27 ~~~KIaVIGaGs---v-~~~ala~~L~~~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 27 KSFSIVIAGGGS---T-FTPGIVLMLLDHLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp CCEEEEEECTTS---S-SHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred CCCEEEEECCCH---H-HHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence 457999987554 3 444566667766 88999988743
No 383
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=22.92 E-value=81 Score=27.85 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=24.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|.++++.++.| + -.++|+.|+++|++|.+++.
T Consensus 26 ~k~vlVTGas~g-I--G~~la~~l~~~G~~v~i~~~ 58 (267)
T 4iiu_A 26 SRSVLVTGASKG-I--GRAIARQLAADGFNIGVHYH 58 (267)
T ss_dssp CCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 466777755543 3 46899999999999988764
No 384
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.78 E-value=93 Score=27.44 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=26.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3567777766553 3468899999999999888653
No 385
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=22.75 E-value=58 Score=29.31 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=24.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
|+|+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 7999997766664 46888999999998765
No 386
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.72 E-value=1.3e+02 Score=24.84 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=31.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+.++...+.|-..-+..|++.|.++|++|.++....
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 34556666677999999999999999999999988653
No 387
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=22.63 E-value=2.5e+02 Score=21.26 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=24.0
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEE
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVL 316 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~ 316 (479)
+..+|+++.|| -.......+..+.+.+++....+.+.+
T Consensus 5 ~~alllv~HGS-~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 5 PHQIILLAHGS-SDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp CEEEEEEECCC-SCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcEEEEEeCCC-CCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 35699999999 332234556777777766444454444
No 388
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=22.62 E-value=70 Score=28.59 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777766553 3467899999999999887754
No 389
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.61 E-value=99 Score=27.39 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=25.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| --.++|+.|+++|++|.+....
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777765543 3467899999999999988754
No 390
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=22.61 E-value=1e+02 Score=27.11 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=24.9
Q ss_pred CCCEEEEecCCCC--CCHHHHHH-HHHHHHhCCCeEEEEcC
Q 011687 9 KKNKILMVPYPAQ--GHVTPMHK-LASILTSRGFEPIVITP 46 (479)
Q Consensus 9 ~~~~i~~~~~~~~--gH~~p~l~-la~~L~~rGh~V~~~~~ 46 (479)
.+|||+++...-+ |...-+.. +++.+.+.|++|.++--
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4578888775443 55444444 56667778999888754
No 391
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.60 E-value=1.2e+02 Score=26.35 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=24.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. - --..+++.|+++|++|+++.-.
T Consensus 6 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 6 GKVIILTAAAQ-G--IGQAAALAFAREGAKVIATDIN 39 (246)
T ss_dssp TCEEEESSTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEECC
Confidence 35566664443 2 2367899999999999988753
No 392
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=22.59 E-value=68 Score=30.35 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=32.8
Q ss_pred CCEEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
..+|+++.=.++ .-+.=++.+++.|.++|++|++.+-+.
T Consensus 212 ~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~ 251 (367)
T 1xfi_A 212 WKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANEL 251 (367)
T ss_dssp CCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBSS
T ss_pred CCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECCc
Confidence 478999997766 677677999999999999999988754
No 393
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=22.56 E-value=38 Score=28.87 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=17.3
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHH---hCCCeEE
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILT---SRGFEPI 42 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~---~rGh~V~ 42 (479)
.|++|||+++...-+.. .-...|++.++ +.|++|.
T Consensus 3 ~M~~mkIl~I~GS~r~~-s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKA-SFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp --CCEEEEEEECCCSTT-CHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCEEEEEEcCCCCC-ChHHHHHHHHHHHccCCCEEE
Confidence 34568888887543311 12334444444 3466665
No 394
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.55 E-value=84 Score=28.01 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 466777755542 246899999999999998754
No 395
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.51 E-value=97 Score=25.97 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=28.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..++++..|..|...-+..+++.|+++|+.|..+-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 3456666677777778899999999999998877653
No 396
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=22.44 E-value=71 Score=29.24 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+|+|++. |+.|.+ -..|++.|.++||+|+.++..
T Consensus 13 ~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 4676655 444544 356789999999999998764
No 397
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.39 E-value=79 Score=28.02 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=24.0
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|.++++.++.| =-..+|+.|+++|++|+++..
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56667755543 346789999999999998865
No 398
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.38 E-value=1e+02 Score=25.84 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=24.4
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 13 ILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 13 i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|+++..+...+-.....+++.+++.|++|.+++-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 4455444445677778888888888988887764
No 399
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=22.35 E-value=96 Score=27.43 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=25.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777755543 346899999999999998876
No 400
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=22.29 E-value=70 Score=31.92 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=28.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.+||.|+..|+.| |-.+|+.|.++|++|+..=.
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 5899999998766 77899999999999998754
No 401
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=22.24 E-value=2.3e+02 Score=25.67 Aligned_cols=85 Identities=7% Similarity=-0.044 Sum_probs=0.0
Q ss_pred CCcEEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccc
Q 011687 278 PNSVIYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGF 357 (479)
Q Consensus 278 ~~~~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~ 357 (479)
++-.|+++--| -.....+.+..+...|++.+..+.+...... ....+.+. ++....++
T Consensus 9 ~~~~vi~Np~s-G~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-----~~a~~~~~--------------~~~~~~d~-- 66 (304)
T 3s40_A 9 EKVLLIVNPKA-GQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-----GDATKYCQ--------------EFASKVDL-- 66 (304)
T ss_dssp SSEEEEECTTC-SSSCHHHHHHHHHHHHHHHCSEEEEEECCST-----THHHHHHH--------------HHTTTCSE--
T ss_pred CEEEEEECccc-CCCchHHHHHHHHHHHHHcCCeEEEEEccCc-----chHHHHHH--------------HhhcCCCE--
Q ss_pred eEeccchhHHHHHHH------hCcceecccCcc
Q 011687 358 YLTHCGWNSTMEAIQ------SGKRLLCYPVAG 384 (479)
Q Consensus 358 ~I~HgG~~s~~eal~------~GvP~l~~P~~~ 384 (479)
+|.-||-||+.|++. .++|+.++|...
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGT 99 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECSS
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecCCc
No 402
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=22.10 E-value=1.1e+02 Score=27.42 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=25.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.+....
T Consensus 49 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777765542 3468999999999999987654
No 403
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=22.05 E-value=1.5e+02 Score=25.59 Aligned_cols=38 Identities=11% Similarity=0.152 Sum_probs=28.7
Q ss_pred CCEEEEecC-----CCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPY-----PAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~-----~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++||+|+.+ ++. -..=+....+.|.+.|++|++++...
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 368999887 443 44555666788999999999999754
No 404
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=22.00 E-value=60 Score=27.89 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=24.2
Q ss_pred CceEEE-eCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 107 RVACVV-VDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 107 ~~D~vi-~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.||+|| .|+.. .-+..=|.++|||.|.++.+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 688887 66644 55777789999999998665
No 405
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.00 E-value=90 Score=31.53 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=36.1
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++.+|++.+.++-.|-....-++..|..+|++|..++...
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 3678999999999999999999999999999999998753
No 406
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.96 E-value=92 Score=27.41 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=26.0
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.-|+++++..+.+. -=-.++|+.|+++|++|.+..-.
T Consensus 5 ~gK~alVTGaa~~~-GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 5 ENKTYVIMGIANKR-SIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TTCEEEEECCCSTT-CHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHHHCCCEEEEEECC
Confidence 46777888643211 12478999999999999888653
No 407
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=21.87 E-value=94 Score=27.56 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=25.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3467777765543 2458999999999999888753
No 408
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=21.85 E-value=1.1e+02 Score=26.86 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=23.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+++++.++. -+ -.++|+.|+++|++|.+..
T Consensus 4 ~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~ 35 (258)
T 3oid_A 4 NKCALVTGSSR-GV--GKAAAIRLAENGYNIVINY 35 (258)
T ss_dssp CCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEc
Confidence 56777775554 22 4678999999999999873
No 409
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=21.84 E-value=50 Score=31.09 Aligned_cols=39 Identities=8% Similarity=0.141 Sum_probs=28.3
Q ss_pred CCCEEEEecCCCCCCHH----HHHHHHHHHHhCCCeEEEEcCC
Q 011687 9 KKNKILMVPYPAQGHVT----PMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~----p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++|||+++..|-.+--. ....+++.|.+.||+|+.+-..
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 46788888876444333 3348889998899999988753
No 410
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=21.83 E-value=46 Score=30.62 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 578888766555 3568889999999999987
No 411
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=21.82 E-value=56 Score=31.72 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=25.0
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
++.|||.|+-.|..| ..+|..|++ ||+|+.+-..
T Consensus 34 ~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 34 SEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 456899999766444 356778887 9999998764
No 412
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=21.81 E-value=98 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=25.5
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 41 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 467777765543 3457899999999999988754
No 413
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=21.67 E-value=1.8e+02 Score=20.93 Aligned_cols=34 Identities=6% Similarity=0.147 Sum_probs=25.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
...|++++..+ ......+..|.+.||+|..+...
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~GG 89 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEGG 89 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETTH
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEeccc
Confidence 35777777433 45677899999999998877663
No 414
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=21.62 E-value=39 Score=33.19 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=23.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
++|+++-.|-.| +.-|..|+++|++|+++=.
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 567777554333 6778889999999999864
No 415
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=21.60 E-value=1.5e+02 Score=22.20 Aligned_cols=49 Identities=2% Similarity=0.011 Sum_probs=34.9
Q ss_pred hCcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcCHH
Q 011687 373 SGKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 373 ~GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~~ 423 (479)
..+|+|++--..+.. ......+ .|+--.+.+ ++.++|.++|+++++...
T Consensus 78 ~~~~ii~~s~~~~~~-~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 127 (137)
T 3hdg_A 78 AKPYVIVISAFSEMK-YFIKAIE-LGVHLFLPKPIEPGRLMETLEDFRHIKL 127 (137)
T ss_dssp CCCEEEECCCCCCHH-HHHHHHH-HCCSEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChH-HHHHHHh-CCcceeEcCCCCHHHHHHHHHHHHHHHh
Confidence 367877776555433 4445556 688777776 999999999999985443
No 416
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=21.60 E-value=58 Score=30.59 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=25.8
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+.++|+++-.|-.| +.+|..|+++|++|+++-..
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 345788888765433 77888999999999998653
No 417
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.57 E-value=1.1e+02 Score=28.30 Aligned_cols=72 Identities=7% Similarity=0.021 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhcccCccceEeccchhHHHHHHH
Q 011687 293 IGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQHNAVGFYLTHCGWNSTMEAIQ 372 (479)
Q Consensus 293 ~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~I~HgG~~s~~eal~ 372 (479)
.+.+-...+.+++..-..+.||.+.++. +-.++.+++++..+-++|.. ||=+.-..+..-|++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~ 124 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF---------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATAIY 124 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS---------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch---------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHHHH
Confidence 3455667799999998889999987653 23445566666667677777 777777777777765
Q ss_pred h--Ccceeccc
Q 011687 373 S--GKRLLCYP 381 (479)
Q Consensus 373 ~--GvP~l~~P 381 (479)
+ |+..+-=|
T Consensus 125 ~~~g~~t~hGp 135 (327)
T 4h1h_A 125 TQTELITYSGA 135 (327)
T ss_dssp HHHCBCEEECC
T ss_pred HhcCeEEEeCc
Confidence 3 44444333
No 418
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.57 E-value=1e+02 Score=27.37 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=25.5
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
..|+++++.++.| =-.++|+.|+++|++|.+...
T Consensus 27 ~~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3577777765543 346789999999999988765
No 419
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=21.57 E-value=1.9e+02 Score=28.08 Aligned_cols=99 Identities=13% Similarity=0.144 Sum_probs=0.0
Q ss_pred CCCcEEEEEeCCccccCCH--HHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCC------CCceEEeeeehH-
Q 011687 277 KPNSVIYISFGSWVSPIGE--EKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNS------RQGKVVPWAPQL- 347 (479)
Q Consensus 277 ~~~~~Vyvs~Gs~~~~~~~--~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~------~nv~~~~~~pq~- 347 (479)
...+.+.+.+|| ....++ +....+-..+.+.+..+ ++|++. ++-+.-......+ ....+++-+|..
T Consensus 142 ~~~~~ivVv~GS-s~~~~~~Ye~A~eLGr~LA~~G~~L--VtGGG~--GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L 216 (460)
T 3bq9_A 142 QEEPNMVVCWGG-HSINEIEYKYTKDVGYHIGLRGLNI--CTGCGP--GAMKGPMKGATIGHAKQRVEGGRYLGLTEPGI 216 (460)
T ss_dssp TCCSCEEEEECC-SSCCHHHHHHHHHHHHHHHHTTCEE--EECCSS--GGGTHHHHHHHHHHHHTTCSSCCEEEEECTTT
T ss_pred CCCCCEEEEEcC-CCCCCHHHHHHHHHHHHHHHCCCEE--EeCCcH--HHhhHHHhhHHhhcccccCCCCEEEEEeChhh
Q ss_pred -----------------------HhhcccCccceEeccchhHHHHHHH------------hCcceecc
Q 011687 348 -----------------------KVLQHNAVGFYLTHCGWNSTMEAIQ------------SGKRLLCY 380 (479)
Q Consensus 348 -----------------------~lL~~~~~~~~I~HgG~~s~~eal~------------~GvP~l~~ 380 (479)
.+|-.-+-..++--||.||.-|... +++|++.+
T Consensus 217 ~~~E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 217 IAAEPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp TTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred hhhhhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEE
No 420
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=21.57 E-value=1.2e+02 Score=22.70 Aligned_cols=46 Identities=9% Similarity=0.108 Sum_probs=32.7
Q ss_pred CcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcC
Q 011687 374 GKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKED 421 (479)
Q Consensus 374 GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~ 421 (479)
.+|+|++--..+.. ...+..+ .|+--.+.+ ++.++|.++|+.++..
T Consensus 81 ~~pii~~s~~~~~~-~~~~~~~-~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 81 EIPIIMITAEGGKA-EVITALK-AGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEEESCCSHH-HHHHHHH-HTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCChH-HHHHHHH-cCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 57888776554443 3444556 687766666 9999999999999843
No 421
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=21.53 E-value=59 Score=27.52 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=23.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+++- +.|.+- ..+++.|.++||+|+++...
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5777774 234333 46788999999999987653
No 422
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=21.49 E-value=86 Score=27.87 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 26 gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 26 GRTALVTGSSRG---LGRAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777765542 2458999999999999887653
No 423
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=21.46 E-value=1.7e+02 Score=23.45 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=29.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
.|||+|+.+++... .-+....+.|.+.|++|.++++..
T Consensus 2 ~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 58999999886644 445566788889999999999854
No 424
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=21.42 E-value=1.6e+02 Score=25.90 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=58.1
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCccccccccCCCCCCCeEEEeCCCCCCCCCCCCHHHHHHHHHHh
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFIHNQITSSMDPRSEISCMSIPDGLEKNEPKDFFAIEKVIENI 90 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~~~~i~~~~~~~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 90 (479)
|||++.-=-+. |---...|+++|.+.| +|+++.+...+........-...+++..++.+ +.. ..+ ....+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~-~~~--~~~-----~v~GT 70 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFIS-ERV--VAY-----STTGT 70 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCS-SSE--EEE-----EESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC-CCC--ceE-----EECCc
Confidence 56666553332 3344778899998888 99999998754444321222223444444321 000 000 00000
Q ss_pred chHHHHHHHHHhhccCCceEEEeCC----------Cc---ccHHHHHHHhCCCcEeEcc
Q 011687 91 MPIHLERLINKINEDGRVACVVVDL----------LA---SSAIGVACRCGVPAAGFWP 136 (479)
Q Consensus 91 ~~~~l~~~l~~l~~~~~~D~vi~D~----------~~---~~~~~~A~~lgiP~v~~~~ 136 (479)
=..++.=-+..+.. .+||+||+-. ++ .+|..=|..+|||.|.++.
T Consensus 71 PaDCV~lal~~l~~-~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 71 PADCVKLAYNVVMD-KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHHHHHTTST-TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHhhcc-CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 00112112233322 2899999632 22 2244555779999999854
No 425
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=21.37 E-value=1.1e+02 Score=28.10 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=23.5
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+++++.++.| =-..+|+.|+++|++|++..
T Consensus 9 gk~~lVTGas~G---IG~~~a~~La~~Ga~Vv~~~ 40 (319)
T 1gz6_A 9 GRVVLVTGAGGG---LGRAYALAFAERGALVVVND 40 (319)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEc
Confidence 466777755542 34578999999999999864
No 426
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.31 E-value=1.2e+02 Score=26.90 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=24.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++ |- =-..+++.|+++|++|+++.-.
T Consensus 6 ~k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 6 EKVAIITGSS-NG--IGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3566666544 32 2457899999999999988753
No 427
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=21.28 E-value=98 Score=26.18 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=23.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHH-hCCCeEEEEcCCc
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILT-SRGFEPIVITPEF 48 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~-~rGh~V~~~~~~~ 48 (479)
||.++++ |+.|.+ -..+++.|+ ++||+|+.+.-..
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecCc
Confidence 4544444 333433 368899999 8999999987643
No 428
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=21.25 E-value=62 Score=29.09 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=25.8
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+|.|+-.|..|. .+|+.|+++||+|++....
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCC
Confidence 6899997776664 5788899999999988654
No 429
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.24 E-value=58 Score=24.13 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=23.7
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCC-CeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRG-FEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rG-h~V~~~~~~ 47 (479)
.++|+++.. |.+- ..+++.|.++| ++|+++...
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 357777743 4332 46889999999 999888764
No 430
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=21.20 E-value=1.2e+02 Score=27.68 Aligned_cols=33 Identities=21% Similarity=0.051 Sum_probs=24.2
Q ss_pred CEEEEecCCC-CCCHHHHHHHHHHHHhCCCeEEEEc
Q 011687 11 NKILMVPYPA-QGHVTPMHKLASILTSRGFEPIVIT 45 (479)
Q Consensus 11 ~~i~~~~~~~-~gH~~p~l~la~~L~~rGh~V~~~~ 45 (479)
.|+++++.++ .|-+ -.++|+.|+++|++|.++.
T Consensus 9 gk~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 9 GQTAFVAGVADSHGY--GWAIAKHLASAGARVALGT 42 (315)
T ss_dssp TCEEEEECCSSSSSH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCCCCCCh--HHHHHHHHHHCCCEEEEEe
Confidence 4667777652 3434 4578999999999999875
No 431
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=21.19 E-value=72 Score=28.11 Aligned_cols=35 Identities=17% Similarity=0.095 Sum_probs=24.8
Q ss_pred CEEEEecCCCC-CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQ-GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~-gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++. |-+- .++|+.|+++|++|+++...
T Consensus 8 ~k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLG--FAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSHH--HHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEcCC
Confidence 35566665542 4443 57899999999999988653
No 432
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=21.16 E-value=1.4e+02 Score=24.95 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=30.8
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVI 44 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~ 44 (479)
+++.|++...++.|=-.-...|++.|...|+++.++
T Consensus 9 ~~~~I~l~G~~GsGKST~~~~L~~~l~~~~~~~~~~ 44 (212)
T 2wwf_A 9 KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHL 44 (212)
T ss_dssp CSCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEE
Confidence 367888888899999999999999999899998543
No 433
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=21.16 E-value=82 Score=24.88 Aligned_cols=37 Identities=11% Similarity=0.008 Sum_probs=26.0
Q ss_pred EEEEec-CCCCCC--HHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 12 KILMVP-YPAQGH--VTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 12 ~i~~~~-~~~~gH--~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
|++|+- .+-+|+ ..-.+.+|..+...||+|.++....
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 455554 344454 4445777999999999999998864
No 434
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=21.11 E-value=63 Score=29.07 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=25.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+|.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 788888766544 46789999999999988654
No 435
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.09 E-value=1.1e+02 Score=26.90 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 10 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 10 GRSVVVTGGTKG---IGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777755542 2457899999999999988754
No 436
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=21.05 E-value=76 Score=29.11 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=26.7
Q ss_pred CEEEEecCCCC--CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQ--GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~--gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+|++++.++. |+ -+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 47888887654 33 378899999999999998653
No 437
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=21.01 E-value=52 Score=30.13 Aligned_cols=46 Identities=22% Similarity=0.060 Sum_probs=32.6
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCcc-ccccccCCCCCCCeEEE
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEFI-HNQITSSMDPRSEISCM 66 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~~-~~~i~~~~~~~~g~~~~ 66 (479)
+|||+|+..|+.|- .+|..|+ .||+|+++..... .+.+.+ .|+...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~-----~G~~~~ 48 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQS-----EGIRLY 48 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHH-----HCEEEE
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHh-----CCceEe
Confidence 38999998777664 5678888 9999999987542 234444 466554
No 438
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=20.99 E-value=1.7e+02 Score=24.25 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=29.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++||+|+.+++..- .-+....+.|.+.|++|++++...
T Consensus 23 ~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 57899999876654 445567788889999999999864
No 439
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=20.94 E-value=42 Score=33.34 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=27.3
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCCc
Q 011687 9 KKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPEF 48 (479)
Q Consensus 9 ~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~~ 48 (479)
++.||+++-.|..| +.+|+.|.++|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 36689998765444 578899998999999998753
No 440
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=20.90 E-value=3.4e+02 Score=22.00 Aligned_cols=130 Identities=15% Similarity=0.195 Sum_probs=74.5
Q ss_pred EEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEcCCcCCCCChhhHhhhcCCCCceEEeeeehHHhhc--ccCccceE
Q 011687 282 IYISFGSWVSPIGEEKVKTLALTLEALGLPFIWVLGFAWREGLPDGYLDRVSNSRQGKVVPWAPQLKVLQ--HNAVGFYL 359 (479)
Q Consensus 282 Vyvs~Gs~~~~~~~~~~~~l~~al~~~~~~~iw~~~~~~~~~l~~~~~~~~~~~~nv~~~~~~pq~~lL~--~~~~~~~I 359 (479)
|-|-+|| ..+....++....++.++..+-.-+-+-++ .|+.+.+ +.. ..++ ||
T Consensus 2 V~Iimgs---~SD~~v~~~a~~~l~~~gi~~dv~V~saHR--~p~~~~~------------------~~~~a~~~V--iI 56 (157)
T 2ywx_A 2 ICIIMGS---ESDLKIAEKAVNILKEFGVEFEVRVASAHR--TPELVEE------------------IVKNSKADV--FI 56 (157)
T ss_dssp EEEEESS---GGGHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHHHH------------------HHHHCCCSE--EE
T ss_pred EEEEEcc---HHHHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHHHHH------------------HHHhcCCCE--EE
Confidence 4456676 456677888899999998886555544322 3433221 111 1144 77
Q ss_pred eccchhHHHHHHH---hCcceecccCccchhhHHHH--HHHHh--ccee---eeCC-CCHHHHHHHHHHHhcCHHHHHHH
Q 011687 360 THCGWNSTMEAIQ---SGKRLLCYPVAGDQFINCAY--IVKMW--KIGI---RVNG-FGKRDIEDGLKKLKEDSEMKHRL 428 (479)
Q Consensus 360 ~HgG~~s~~eal~---~GvP~l~~P~~~DQ~~nA~r--v~~~~--Gvg~---~~~~-~~~~~i~~~i~~vl~~~~~~~~a 428 (479)
.=+|...-+-... .-+|+|.+|....-...... +.+ + |+.+ .+++ .+..-++..|- -++|++++++.
T Consensus 57 a~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vq-mP~gvpVatV~I~~~~nAa~lA~~Il-~~~d~~l~~kl 134 (157)
T 2ywx_A 57 AIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQ-MPPGIPVATVGIDRGENAAILALEIL-ALKDENIAKKL 134 (157)
T ss_dssp EEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHS-CCTTSCCEECCTTCHHHHHHHHHHHH-TTTCHHHHHHH
T ss_pred EEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhc-CCCCCeeEEEecCCcHHHHHHHHHHH-hcCCHHHHHHH
Confidence 7666433333322 45899999983322222222 333 2 4332 1233 66666665554 34689999999
Q ss_pred HHHHHHHccc
Q 011687 429 MNLYMRTMGD 438 (479)
Q Consensus 429 ~~l~~~~~~~ 438 (479)
+..+++....
T Consensus 135 ~~~r~~~~~~ 144 (157)
T 2ywx_A 135 IEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888774
No 441
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=20.89 E-value=1e+02 Score=27.08 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=24.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 466777755543 236899999999999998844
No 442
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.70 E-value=1.2e+02 Score=26.49 Aligned_cols=33 Identities=15% Similarity=0.006 Sum_probs=23.0
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |- =-..+++.|+++|++|+++...
T Consensus 7 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-RG--IGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 32 2457899999999999988653
No 443
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=20.68 E-value=47 Score=30.85 Aligned_cols=34 Identities=12% Similarity=0.060 Sum_probs=24.3
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|++. |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 9 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 4666554 4555543 56789999999999988753
No 444
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=20.63 E-value=58 Score=28.94 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=24.9
Q ss_pred EEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 14 LMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 14 ~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+++..|..|+-.-+..+++.|+++|++|..+--
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl 86 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRL 86 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 344466667777788899999999999876543
No 445
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=20.61 E-value=1.1e+02 Score=28.76 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=25.9
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.++|+++..|. .-+..|..|+++||+|+++-..
T Consensus 3 ~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 47888886553 3567899999999999999764
No 446
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=20.56 E-value=76 Score=27.79 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=25.5
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|+++++.++.| + -.++|+.|+++|++|.++...
T Consensus 6 ~~k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 6 QKGLAIITGASQG-I--GAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CCCEEEEESTTSH-H--HHHHHHHHHHHTCEEEEEESC
T ss_pred CCCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 3567777755542 2 368999999999999888753
No 447
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.55 E-value=82 Score=28.28 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=23.3
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 565554 4444443 46789999999999988764
No 448
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=20.54 E-value=73 Score=29.91 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=28.9
Q ss_pred EEEEec-CCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVP-YPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~-~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|+. -|+-|=..-...||..|+++|++|.++=.+
T Consensus 3 vIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 3 TISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp EEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 344443 356699999999999999999999999754
No 449
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=20.51 E-value=1.3e+02 Score=27.26 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=29.7
Q ss_pred CEEEEecC-CCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPY-PAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~-~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.|+|... |+-|-..-...||..|++.|.+|.++-.+
T Consensus 105 kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 105 NILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 34444443 67799999999999999999999999764
No 450
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=20.49 E-value=1e+02 Score=27.47 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=25.2
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
..|.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 10 QDRTYLVTGGGSG---IGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3466777755442 2357899999999999988753
No 451
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=20.39 E-value=1.3e+02 Score=24.23 Aligned_cols=36 Identities=11% Similarity=0.107 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCCHHHHH-HHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMH-KLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l-~la~~L~~rGh~V~~~~~ 46 (479)
|||+++=+...|+..-+. .|++.|.+.|++|.++--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 456655555568877665 468888889999887754
No 452
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=20.36 E-value=1.5e+02 Score=25.72 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=22.9
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|.++++.++. -+ -..+++.|+++|++|+++.-
T Consensus 8 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGAN-GI--GRAIAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 4556664443 23 45799999999999998865
No 453
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.31 E-value=53 Score=28.82 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=26.2
Q ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 8 KKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 8 ~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
...|+|.|+-.|..| ..+|+.|++.||+|++....
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 346899999665444 46789999999999988654
No 454
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.31 E-value=87 Score=30.29 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|||+|+-.|..| ..+|..|++.||+|+++...
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEECC
Confidence 578888655555 46788899999999988653
No 455
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=20.29 E-value=99 Score=25.48 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=24.4
Q ss_pred CCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCe
Q 011687 7 TKKKNKILMVPYPAQGHVTPMHKLASILTSRGFE 40 (479)
Q Consensus 7 ~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~ 40 (479)
+|...+|++++ ++.+++--+...++.|.+-|..
T Consensus 3 ~m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~ 35 (169)
T 3trh_A 3 AMNKIFVAILM-GSDSDLSTMETAFTELKSLGIP 35 (169)
T ss_dssp ---CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCC
Confidence 34446777776 8889999999999999887754
No 456
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=20.28 E-value=1.3e+02 Score=26.10 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
.|.++++.++.| =-.++|+.|+++|++|.++..
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 467777766654 346899999999999988644
No 457
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=20.22 E-value=88 Score=27.38 Aligned_cols=38 Identities=16% Similarity=0.374 Sum_probs=25.0
Q ss_pred CCEEEEecCCCCCCH--HHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHV--TPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~--~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
+.-++++..|+.+|- ..+..+|+.|+++|+.|..+=..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 456777777777763 35778999999999998887653
No 458
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=20.21 E-value=81 Score=28.13 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=26.7
Q ss_pred CEEEEecCCCC--CCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQ--GHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~--gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.+|++++.++. |+ -+.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 47888886654 33 378899999999999998653
No 459
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.21 E-value=79 Score=29.09 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=24.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+|++. |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4666654 4555543 57899999999999998763
No 460
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=20.18 E-value=2.5e+02 Score=27.17 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=24.1
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
+.+|.++.. |++- +.+|-.|+++||+|+-+=.
T Consensus 21 m~~IaViGl---GYVG--Lp~A~~~A~~G~~V~g~Di 52 (444)
T 3vtf_A 21 MASLSVLGL---GYVG--VVHAVGFALLGHRVVGYDV 52 (444)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHHTCEEEEECS
T ss_pred CCEEEEEcc---CHHH--HHHHHHHHhCCCcEEEEEC
Confidence 458888744 4443 8889999999999987743
No 461
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=20.17 E-value=1.4e+02 Score=17.17 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=21.9
Q ss_pred HHHHHHHHHHh-cCHHHHHHHHHHHHHHcc
Q 011687 409 RDIEDGLKKLK-EDSEMKHRLMNLYMRTMG 437 (479)
Q Consensus 409 ~~i~~~i~~vl-~~~~~~~~a~~l~~~~~~ 437 (479)
.++.+.+.+++ .+.+....+.++++.+..
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll~~ 33 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXLVXE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 46778888888 567788888888877643
No 462
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.17 E-value=1.3e+02 Score=22.77 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=33.2
Q ss_pred CcceecccCccchhhHHHHHHHHhcceeeeCC-CCHHHHHHHHHHHhcCHH
Q 011687 374 GKRLLCYPVAGDQFINCAYIVKMWKIGIRVNG-FGKRDIEDGLKKLKEDSE 423 (479)
Q Consensus 374 GvP~l~~P~~~DQ~~nA~rv~~~~Gvg~~~~~-~~~~~i~~~i~~vl~~~~ 423 (479)
.+|+|++--..+. ....+..+ .|+--.+.+ ++.++|..+|++++....
T Consensus 78 ~~pii~~t~~~~~-~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~~~ 126 (136)
T 3t6k_A 78 TLPILMLTAQGDI-SAKIAGFE-AGANDYLAKPFEPQELVYRVKNILARTT 126 (136)
T ss_dssp TCCEEEEECTTCH-HHHHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC--
T ss_pred CccEEEEecCCCH-HHHHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhccC
Confidence 6788877655444 34445556 687767766 999999999999985443
No 463
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=20.15 E-value=67 Score=28.47 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=24.4
Q ss_pred CceEEE-eCCCc-ccHHHHHHHhCCCcEeEcch
Q 011687 107 RVACVV-VDLLA-SSAIGVACRCGVPAAGFWPA 137 (479)
Q Consensus 107 ~~D~vi-~D~~~-~~~~~~A~~lgiP~v~~~~~ 137 (479)
.||+|| .|+.. .-+..=|.++|||.|.++.+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 688887 67654 55777789999999998665
No 464
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=20.14 E-value=1e+02 Score=25.08 Aligned_cols=28 Identities=29% Similarity=0.301 Sum_probs=21.1
Q ss_pred EEEEEeCCccccCCHHHHHHHHHHHHhCC
Q 011687 281 VIYISFGSWVSPIGEEKVKTLALTLEALG 309 (479)
Q Consensus 281 ~Vyvs~Gs~~~~~~~~~~~~l~~al~~~~ 309 (479)
.+|+++|| ....+...+...+.++.+.+
T Consensus 2 ~~~i~LGS-NlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGS-NLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEE-CSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEec-CccCHHHHHHHHHHHHhcCC
Confidence 68999999 54455677777788887754
No 465
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.10 E-value=1.7e+02 Score=22.79 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=0.0
Q ss_pred cCCCCCCCEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcC
Q 011687 4 MMCTKKKNKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITP 46 (479)
Q Consensus 4 ~~~~~~~~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~ 46 (479)
|+.+.++++|+++ -.+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILiv----dd~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIV----EDSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEE----CSCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEE----eCCHHHHHHHHHHHHHCCCEEEEeCC
No 466
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.09 E-value=1.2e+02 Score=26.29 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=23.5
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 12 KILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 12 ~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
|.++++.++ |- --..+++.|+++|++|+++...
T Consensus 7 k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 7 KVAIITGGT-LG--IGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp CEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455566443 32 3467999999999999988754
No 467
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.08 E-value=1e+02 Score=26.99 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=25.4
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 12 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 12 DAVAIVTGAAAG---IGRAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp TCEEEECSCSSH---HHHHHHHHHHHHTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777765543 3468899999999999888754
No 468
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=20.02 E-value=1.1e+02 Score=29.55 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=34.8
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHhC-CCeEEEEcCCccc
Q 011687 10 KNKILMVPYPAQGHVTPMHKLASILTSR-GFEPIVITPEFIH 50 (479)
Q Consensus 10 ~~~i~~~~~~~~gH~~p~l~la~~L~~r-Gh~V~~~~~~~~~ 50 (479)
+..|+++..++-|-..-+..||..|+++ |++|.++..+.++
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 3466677677889999999999999999 9999999987643
No 469
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=20.01 E-value=96 Score=27.35 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=26.7
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHhCCCeEEEEcCC
Q 011687 11 NKILMVPYPAQGHVTPMHKLASILTSRGFEPIVITPE 47 (479)
Q Consensus 11 ~~i~~~~~~~~gH~~p~l~la~~L~~rGh~V~~~~~~ 47 (479)
.|.++++.++.| =-.++|+.|+++|++|.++...
T Consensus 2 nK~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467788877665 3468999999999999888654
Done!